Query 000399
Match_columns 1566
No_of_seqs 1070 out of 7961
Neff 7.0
Searched_HMMs 46136
Date Fri Mar 29 07:14:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000399.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000399hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd06071 Beach BEACH (Beige and 100.0 1.4E-65 3.1E-70 580.4 5.9 233 370-602 1-275 (275)
2 PF02138 Beach: Beige/BEACH do 100.0 3.2E-64 6.9E-69 570.7 0.3 233 370-602 1-270 (270)
3 KOG4190 Uncharacterized conser 100.0 1.1E-62 2.4E-67 561.1 6.5 615 861-1562 8-926 (1034)
4 KOG0615 Serine/threonine prote 100.0 6.5E-43 1.4E-47 397.7 1.9 180 160-362 170-351 (475)
5 PLN00181 protein SPA1-RELATED; 100.0 3E-40 6.4E-45 438.1 26.0 249 1280-1566 480-775 (793)
6 KOG0593 Predicted protein kina 100.0 1.2E-41 2.5E-46 373.3 0.1 152 161-329 1-152 (396)
7 KOG0600 Cdc2-related protein k 100.0 4.1E-41 8.9E-46 391.4 3.7 155 158-329 113-269 (560)
8 KOG0659 Cdk activating kinase 100.0 3.4E-41 7.4E-46 365.2 2.1 149 162-327 2-150 (318)
9 KOG0663 Protein kinase PITSLRE 100.0 5E-41 1.1E-45 372.9 2.9 158 155-329 69-228 (419)
10 KOG0661 MAPK related serine/th 100.0 8.2E-41 1.8E-45 386.3 1.3 154 158-329 6-161 (538)
11 KOG0575 Polo-like serine/threo 100.0 3.5E-40 7.5E-45 393.4 4.7 172 162-361 18-190 (592)
12 KOG1787 Kinase A-anchor protei 100.0 1.1E-39 2.4E-44 417.6 1.6 240 368-607 470-755 (1126)
13 KOG0660 Mitogen-activated prot 100.0 1E-39 2.2E-44 369.6 1.0 152 160-329 20-176 (359)
14 KOG0605 NDR and related serine 100.0 9.1E-39 2E-43 375.6 5.0 149 161-326 140-289 (550)
15 KOG0581 Mitogen-activated prot 100.0 8.7E-39 1.9E-43 363.5 2.6 170 161-362 78-250 (364)
16 KOG0597 Serine-threonine prote 100.0 1.2E-37 2.6E-42 363.1 3.3 171 162-361 2-172 (808)
17 KOG0033 Ca2+/calmodulin-depend 100.0 3.9E-37 8.4E-42 328.5 5.5 155 159-329 8-164 (355)
18 KOG0588 Serine/threonine prote 100.0 1E-36 2.3E-41 363.0 8.6 151 160-327 10-161 (786)
19 KOG0595 Serine/threonine-prote 100.0 3.1E-37 6.7E-42 352.8 -1.6 203 160-397 8-215 (429)
20 KOG0658 Glycogen synthase kina 100.0 1.2E-36 2.6E-41 345.1 2.8 146 163-329 25-177 (364)
21 KOG0594 Protein kinase PCTAIRE 100.0 2.7E-36 5.8E-41 343.7 2.6 151 161-327 10-169 (323)
22 KOG0694 Serine/threonine prote 100.0 3.9E-36 8.4E-41 362.0 3.5 173 160-361 366-540 (694)
23 KOG0583 Serine/threonine prote 100.0 2.2E-35 4.7E-40 355.0 5.0 174 161-362 16-194 (370)
24 KOG0592 3-phosphoinositide-dep 100.0 1.2E-35 2.7E-40 348.3 -0.2 253 158-434 69-326 (604)
25 KOG0598 Ribosomal protein S6 k 100.0 1.6E-35 3.4E-40 337.0 -0.4 201 161-396 24-225 (357)
26 KOG0271 Notchless-like WD40 re 100.0 4.3E-34 9.3E-39 319.2 8.0 267 1258-1566 137-463 (480)
27 KOG0616 cAMP-dependent protein 100.0 1.2E-35 2.7E-40 326.3 -4.8 239 161-437 43-292 (355)
28 KOG0585 Ca2+/calmodulin-depend 100.0 1.2E-34 2.6E-39 334.5 1.4 162 156-328 91-260 (576)
29 KOG0198 MEKK and related serin 100.0 2.7E-34 5.8E-39 333.1 3.3 150 161-329 16-169 (313)
30 KOG0666 Cyclin C-dependent kin 100.0 7.6E-34 1.7E-38 312.2 2.7 161 159-329 21-187 (438)
31 KOG0610 Putative serine/threon 100.0 1.9E-33 4.1E-38 321.4 5.2 153 161-328 76-229 (459)
32 KOG0599 Phosphorylase kinase g 100.0 1E-33 2.2E-38 306.1 2.7 176 161-362 16-195 (411)
33 KOG0271 Notchless-like WD40 re 100.0 8E-33 1.7E-37 309.0 8.9 233 1277-1565 109-420 (480)
34 KOG4717 Serine/threonine prote 100.0 4.2E-33 9.2E-38 320.9 5.7 155 157-327 13-168 (864)
35 KOG0591 NIMA (never in mitosis 100.0 8.1E-35 1.7E-39 316.9 -8.1 192 160-378 17-217 (375)
36 KOG1786 Lysosomal trafficking 100.0 5E-33 1.1E-37 366.6 5.7 241 366-606 335-630 (1081)
37 KOG0578 p21-activated serine/t 100.0 6.2E-33 1.3E-37 329.2 4.5 168 161-360 272-440 (550)
38 KOG0272 U4/U6 small nuclear ri 100.0 7.4E-32 1.6E-36 305.8 10.0 224 1278-1566 212-442 (459)
39 KOG0032 Ca2+/calmodulin-depend 100.0 1E-32 2.3E-37 331.6 2.7 154 160-329 33-190 (382)
40 KOG0582 Ste20-like serine/thre 100.0 5.3E-32 1.2E-36 311.4 6.5 153 160-329 24-177 (516)
41 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3.8E-32 8.3E-37 318.5 5.1 148 161-326 4-151 (288)
42 cd05612 STKc_PRKX_like Catalyt 100.0 2.6E-32 5.7E-37 320.4 2.4 149 162-327 1-150 (291)
43 PTZ00263 protein kinase A cata 100.0 3.7E-32 8.1E-37 325.1 3.0 148 161-326 17-166 (329)
44 cd05571 STKc_PKB Catalytic dom 100.0 4.5E-32 9.8E-37 323.5 3.4 141 168-326 1-143 (323)
45 KOG0201 Serine/threonine prote 100.0 1.1E-32 2.4E-37 317.4 -1.9 170 162-361 13-183 (467)
46 KOG1240 Protein kinase contain 100.0 1.3E-29 2.9E-34 315.0 23.3 145 163-326 24-168 (1431)
47 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.2E-31 2.7E-36 320.7 4.6 147 163-327 1-152 (338)
48 KOG0579 Ste20-like serine/thre 100.0 2.6E-31 5.7E-36 311.1 7.0 171 161-361 31-202 (1187)
49 PTZ00036 glycogen synthase kin 100.0 7.1E-32 1.5E-36 335.0 1.1 146 161-327 65-220 (440)
50 KOG0596 Dual specificity; seri 100.0 4.5E-31 9.8E-36 309.4 3.6 172 163-362 362-534 (677)
51 cd05585 STKc_YPK1_like Catalyt 100.0 4.4E-31 9.5E-36 313.4 3.1 140 170-327 1-142 (312)
52 cd05593 STKc_PKB_gamma Catalyt 100.0 5.8E-31 1.3E-35 314.7 4.0 141 168-326 1-143 (328)
53 KOG0611 Predicted serine/threo 100.0 1.5E-31 3.3E-36 301.2 -1.9 189 161-378 52-242 (668)
54 cd07853 STKc_NLK Catalytic dom 100.0 8E-31 1.7E-35 318.9 2.3 146 163-326 1-151 (372)
55 cd05610 STKc_MASTL Catalytic d 100.0 5.2E-30 1.1E-34 332.9 10.0 174 161-362 3-177 (669)
56 cd05590 STKc_nPKC_eta Catalyti 100.0 1.4E-30 3E-35 310.3 3.8 141 168-326 1-144 (320)
57 cd05584 STKc_p70S6K Catalytic 100.0 2.1E-30 4.6E-35 309.1 4.4 145 167-326 1-148 (323)
58 KOG4279 Serine/threonine prote 100.0 9.6E-31 2.1E-35 309.5 1.1 164 169-361 582-748 (1226)
59 KOG0272 U4/U6 small nuclear ri 100.0 4.1E-30 8.9E-35 291.6 5.5 211 1289-1565 183-398 (459)
60 cd07878 STKc_p38beta_MAPK11 Ca 100.0 2.2E-30 4.7E-35 311.3 3.0 150 159-327 12-167 (343)
61 cd07872 STKc_PCTAIRE2 Catalyti 100.0 3.8E-30 8.2E-35 304.6 4.7 148 161-326 5-152 (309)
62 KOG0580 Serine/threonine prote 100.0 2.6E-30 5.6E-35 277.5 2.8 203 157-394 17-220 (281)
63 KOG0604 MAP kinase-activated p 100.0 3.3E-30 7.1E-35 283.0 3.1 150 157-327 56-213 (400)
64 cd05620 STKc_nPKC_delta Cataly 100.0 4.1E-30 8.9E-35 305.8 4.1 141 168-326 1-144 (316)
65 KOG0603 Ribosomal protein S6 k 100.0 7E-30 1.5E-34 307.2 3.2 184 169-385 1-186 (612)
66 PLN00034 mitogen-activated pro 100.0 8.3E-30 1.8E-34 307.8 3.7 144 161-327 73-217 (353)
67 cd05619 STKc_nPKC_theta Cataly 100.0 1.1E-29 2.4E-34 302.0 4.1 141 168-326 1-144 (316)
68 cd05570 STKc_PKC Catalytic dom 100.0 1.1E-29 2.4E-34 302.3 3.9 141 168-326 1-144 (318)
69 cd07873 STKc_PCTAIRE1 Catalyti 99.9 4.4E-29 9.5E-34 294.2 5.3 148 161-326 5-152 (301)
70 cd07861 STKc_CDK1_euk Catalyti 99.9 3.8E-29 8.3E-34 291.4 4.7 148 163-326 1-149 (285)
71 KOG0279 G protein beta subunit 99.9 3.5E-28 7.5E-33 264.1 11.5 229 1277-1566 9-245 (315)
72 PTZ00283 serine/threonine prot 99.9 4.3E-29 9.3E-34 314.1 4.2 151 161-327 31-192 (496)
73 KOG0667 Dual-specificity tyros 99.9 3.2E-29 7E-34 303.3 -0.6 192 163-392 187-384 (586)
74 cd07845 STKc_CDK10 Catalytic d 99.9 2.6E-28 5.6E-33 288.8 5.4 152 159-327 4-157 (309)
75 KOG4236 Serine/threonine prote 99.9 7.5E-29 1.6E-33 286.6 0.6 198 163-393 563-763 (888)
76 KOG0295 WD40 repeat-containing 99.9 1.9E-27 4.1E-32 265.9 10.1 258 1282-1565 107-387 (406)
77 KOG0285 Pleiotropic regulator 99.9 2.8E-27 6.1E-32 262.9 11.3 222 1278-1566 146-372 (460)
78 cd07860 STKc_CDK2_3 Catalytic 99.9 3.6E-28 7.8E-33 283.3 4.4 148 163-326 1-148 (284)
79 KOG0263 Transcription initiati 99.9 1.2E-27 2.6E-32 290.3 8.4 212 1289-1566 386-631 (707)
80 KOG0690 Serine/threonine prote 99.9 5.7E-29 1.2E-33 274.4 -3.1 214 160-408 166-381 (516)
81 KOG0192 Tyrosine kinase specif 99.9 2.2E-28 4.9E-33 291.9 1.5 210 161-405 40-256 (362)
82 KOG0197 Tyrosine kinases [Sign 99.9 3.7E-28 7.9E-33 288.8 1.3 187 162-378 206-393 (468)
83 KOG0265 U5 snRNP-specific prot 99.9 1.1E-26 2.4E-31 254.6 12.3 258 1276-1565 40-319 (338)
84 KOG0286 G-protein beta subunit 99.9 1.4E-26 3.1E-31 252.6 13.0 223 1279-1566 93-327 (343)
85 KOG0275 Conserved WD40 repeat- 99.9 1.3E-27 2.9E-32 261.2 3.8 321 1189-1565 111-490 (508)
86 KOG0574 STE20-like serine/thre 99.9 6.2E-28 1.3E-32 263.6 1.2 197 162-397 33-231 (502)
87 KOG0662 Cyclin-dependent kinas 99.9 3E-28 6.5E-33 249.6 -2.1 189 162-378 2-191 (292)
88 cd05629 STKc_NDR_like_fungal C 99.9 8.6E-28 1.9E-32 292.9 1.1 210 162-395 1-247 (377)
89 KOG0263 Transcription initiati 99.9 1.5E-26 3.4E-31 280.7 11.9 221 1277-1563 445-694 (707)
90 KOG0589 Serine/threonine prote 99.9 1.7E-27 3.8E-32 282.6 3.6 191 161-378 3-195 (426)
91 cd05628 STKc_NDR1 Catalytic do 99.9 6.8E-28 1.5E-32 292.3 0.1 211 162-396 1-236 (363)
92 cd07858 STKc_TEY_MAPK_plant Ca 99.9 2.2E-27 4.8E-32 284.8 4.0 149 161-327 4-157 (337)
93 cd05625 STKc_LATS1 Catalytic d 99.9 1E-27 2.3E-32 292.7 0.9 209 163-395 2-247 (382)
94 KOG0608 Warts/lats-like serine 99.9 1.8E-27 3.8E-32 280.3 2.6 222 163-408 630-888 (1034)
95 cd05626 STKc_LATS2 Catalytic d 99.9 1.2E-27 2.5E-32 292.2 1.1 209 163-395 2-247 (381)
96 cd06611 STKc_SLK_like Catalyti 99.9 2.1E-27 4.6E-32 276.4 3.1 147 161-326 4-151 (280)
97 cd07837 STKc_CdkB_plant Cataly 99.9 2.8E-27 6E-32 277.4 4.0 149 162-326 1-159 (295)
98 cd05599 STKc_NDR_like Catalyti 99.9 1.2E-27 2.6E-32 290.0 0.9 210 162-395 1-238 (364)
99 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 2.5E-27 5.4E-32 276.7 3.3 149 162-327 1-152 (286)
100 KOG1290 Serine/threonine prote 99.9 8.8E-27 1.9E-31 270.3 7.4 136 161-313 77-225 (590)
101 KOG0612 Rho-associated, coiled 99.9 6.1E-28 1.3E-32 301.9 -2.3 201 161-395 74-280 (1317)
102 cd07854 STKc_MAPK4_6 Catalytic 99.9 3.5E-27 7.6E-32 283.7 3.6 146 161-326 4-163 (342)
103 cd05598 STKc_LATS Catalytic do 99.9 1.4E-27 2.9E-32 291.0 -0.1 209 163-395 2-243 (376)
104 cd07880 STKc_p38gamma_MAPK12 C 99.9 4.4E-27 9.5E-32 283.0 3.3 150 158-326 11-166 (343)
105 cd07851 STKc_p38 Catalytic dom 99.9 7.3E-27 1.6E-31 281.0 4.3 148 160-326 13-166 (343)
106 cd05600 STKc_Sid2p_Dbf2p Catal 99.9 4.6E-27 1E-31 281.4 1.1 194 163-395 2-197 (333)
107 PTZ00426 cAMP-dependent protei 99.9 4.2E-27 9.1E-32 282.9 0.5 197 161-395 29-227 (340)
108 cd06636 STKc_MAP4K4_6 Catalyti 99.9 9.8E-27 2.1E-31 271.2 3.6 148 161-327 15-170 (282)
109 KOG0284 Polyadenylation factor 99.9 2.9E-26 6.3E-31 259.2 6.9 223 1279-1566 134-362 (464)
110 PTZ00024 cyclin-dependent prot 99.9 1.8E-26 3.8E-31 276.4 5.3 157 161-327 7-168 (335)
111 KOG0986 G protein-coupled rece 99.9 2.9E-27 6.3E-32 271.7 -1.7 200 162-395 185-385 (591)
112 cd05621 STKc_ROCK2 Catalytic d 99.9 5E-27 1.1E-31 285.5 0.2 200 161-395 42-246 (370)
113 cd05627 STKc_NDR2 Catalytic do 99.9 6.6E-27 1.4E-31 283.3 0.6 210 162-395 1-235 (360)
114 KOG0313 Microtubule binding pr 99.9 1.1E-25 2.5E-30 252.8 10.3 277 1254-1565 76-400 (423)
115 cd06608 STKc_myosinIII_like Ca 99.9 1.9E-26 4E-31 266.4 3.4 148 161-327 5-162 (275)
116 cd05573 STKc_ROCK_NDR_like Cat 99.9 1.1E-26 2.4E-31 279.6 1.5 210 162-395 1-229 (350)
117 cd05631 STKc_GRK4 Catalytic do 99.9 8.1E-27 1.8E-31 273.1 0.1 197 164-395 2-200 (285)
118 KOG0607 MAP kinase-interacting 99.9 1.3E-26 2.8E-31 256.1 1.6 196 161-378 76-280 (463)
119 KOG0695 Serine/threonine prote 99.9 2.5E-26 5.5E-31 253.7 3.5 203 161-398 249-453 (593)
120 KOG0586 Serine/threonine prote 99.9 1.6E-26 3.4E-31 277.1 1.4 203 160-399 54-258 (596)
121 KOG0669 Cyclin T-dependent kin 99.9 9.4E-27 2E-31 250.0 -0.5 203 159-392 14-225 (376)
122 KOG0316 Conserved WD40 repeat- 99.9 1.4E-25 2.9E-30 238.1 8.1 254 1277-1565 11-281 (307)
123 KOG1187 Serine/threonine prote 99.9 2.8E-26 6E-31 275.7 3.2 203 161-399 74-281 (361)
124 KOG0577 Serine/threonine prote 99.9 6E-27 1.3E-31 274.3 -2.9 185 162-378 26-214 (948)
125 cd07869 STKc_PFTAIRE1 Catalyti 99.9 2.5E-26 5.3E-31 271.3 1.7 199 161-395 4-203 (303)
126 cd05622 STKc_ROCK1 Catalytic d 99.9 1.7E-26 3.7E-31 281.0 0.2 200 161-395 42-246 (371)
127 cd05596 STKc_ROCK Catalytic do 99.9 1.9E-26 4E-31 280.5 0.4 200 161-395 42-246 (370)
128 KOG0281 Beta-TrCP (transducin 99.9 8E-26 1.7E-30 249.8 5.0 236 1284-1563 198-458 (499)
129 KOG0279 G protein beta subunit 99.9 3.2E-25 6.9E-30 241.2 9.2 219 1279-1566 59-295 (315)
130 cd05595 STKc_PKB_beta Catalyti 99.9 2.4E-26 5.1E-31 274.4 0.2 192 168-395 1-194 (323)
131 KOG0696 Serine/threonine prote 99.9 6.9E-26 1.5E-30 256.2 3.8 213 161-408 348-563 (683)
132 PHA03212 serine/threonine kina 99.9 2.9E-26 6.2E-31 280.7 0.3 191 161-394 91-281 (391)
133 cd05589 STKc_PKN Catalytic dom 99.9 4.6E-26 9.9E-31 271.9 1.4 198 164-395 1-200 (324)
134 KOG0193 Serine/threonine prote 99.9 8.5E-26 1.8E-30 268.7 3.4 197 162-395 392-592 (678)
135 cd05102 PTKc_VEGFR3 Catalytic 99.9 6.3E-26 1.4E-30 272.0 2.3 207 161-395 6-276 (338)
136 cd05597 STKc_DMPK_like Catalyt 99.9 3.1E-26 6.7E-31 274.3 -0.5 201 162-395 1-207 (331)
137 KOG0286 G-protein beta subunit 99.9 1.9E-24 4.1E-29 236.1 13.2 224 1277-1566 49-285 (343)
138 cd05601 STKc_CRIK Catalytic do 99.9 4.6E-26 1E-30 272.4 0.7 200 163-395 2-208 (330)
139 cd05624 STKc_MRCK_beta Catalyt 99.9 3.8E-26 8.2E-31 273.6 -0.1 201 162-395 1-207 (331)
140 cd05587 STKc_cPKC Catalytic do 99.9 5.2E-26 1.1E-30 271.4 1.1 197 163-395 1-200 (324)
141 cd07848 STKc_CDKL5 Catalytic d 99.9 5.8E-26 1.3E-30 265.4 1.4 199 163-395 2-200 (287)
142 cd05594 STKc_PKB_alpha Catalyt 99.9 4.6E-26 1E-30 272.0 0.5 191 168-394 1-194 (325)
143 cd07862 STKc_CDK6 Catalytic do 99.9 5.9E-26 1.3E-30 265.7 1.2 198 163-394 2-207 (290)
144 KOG0315 G-protein beta subunit 99.9 1.2E-24 2.5E-29 232.9 11.0 237 1289-1563 48-309 (311)
145 cd05588 STKc_aPKC Catalytic do 99.9 4.8E-26 1E-30 272.4 0.5 195 168-397 1-197 (329)
146 cd05616 STKc_cPKC_beta Catalyt 99.9 6.5E-26 1.4E-30 270.5 1.0 197 163-395 1-200 (323)
147 KOG0194 Protein tyrosine kinas 99.9 3.4E-26 7.4E-31 276.5 -1.7 215 163-408 158-376 (474)
148 cd05614 STKc_MSK2_N N-terminal 99.9 7.3E-26 1.6E-30 270.9 1.1 202 163-395 1-206 (332)
149 KOG4250 TANK binding protein k 99.9 9.6E-26 2.1E-30 273.1 1.6 198 163-394 14-222 (732)
150 PHA03207 serine/threonine kina 99.9 2.1E-25 4.7E-30 273.4 4.6 195 161-394 91-285 (392)
151 cd05602 STKc_SGK1 Catalytic do 99.9 3.8E-26 8.2E-31 272.7 -2.2 193 168-395 1-195 (325)
152 KOG0282 mRNA splicing factor [ 99.9 2.9E-25 6.4E-30 256.2 5.0 234 1277-1565 208-485 (503)
153 cd05618 STKc_aPKC_iota Catalyt 99.9 1E-25 2.2E-30 269.7 0.7 193 168-395 1-195 (329)
154 KOG4721 Serine/threonine prote 99.9 9.5E-26 2.1E-30 263.4 0.0 217 165-430 127-348 (904)
155 cd05592 STKc_nPKC_theta_delta 99.9 1.1E-25 2.4E-30 267.8 0.5 192 168-395 1-195 (316)
156 cd05623 STKc_MRCK_alpha Cataly 99.9 8.7E-26 1.9E-30 270.5 -0.5 201 162-395 1-207 (332)
157 cd05603 STKc_SGK2 Catalytic do 99.9 1.2E-25 2.7E-30 267.7 0.7 192 168-395 1-195 (321)
158 KOG0293 WD40 repeat-containing 99.9 2.3E-24 5E-29 243.5 10.8 254 1278-1565 219-493 (519)
159 cd05582 STKc_RSK_N N-terminal 99.9 1.1E-25 2.3E-30 267.9 0.0 196 167-395 1-197 (318)
160 cd05591 STKc_nPKC_epsilon Cata 99.9 1E-25 2.2E-30 268.5 -0.2 192 168-395 1-195 (321)
161 cd05615 STKc_cPKC_alpha Cataly 99.9 1.3E-25 2.9E-30 267.9 0.7 197 163-395 1-200 (323)
162 cd05575 STKc_SGK Catalytic dom 99.9 1.5E-25 3.3E-30 267.3 1.1 191 168-394 1-194 (323)
163 cd05604 STKc_SGK3 Catalytic do 99.9 1.4E-25 2.9E-30 267.9 0.6 191 168-394 1-194 (325)
164 cd07876 STKc_JNK2 Catalytic do 99.9 1.9E-25 4.2E-30 270.4 1.8 196 160-394 19-220 (359)
165 KOG0266 WD40 repeat-containing 99.9 3.7E-24 8.1E-29 266.4 13.1 244 1289-1565 167-433 (456)
166 cd05605 STKc_GRK4_like Catalyt 99.9 1.5E-25 3.3E-30 262.3 0.5 198 163-395 1-200 (285)
167 cd05617 STKc_aPKC_zeta Catalyt 99.9 1.5E-25 3.3E-30 267.8 -0.1 193 168-395 1-195 (327)
168 cd07863 STKc_CDK4 Catalytic do 99.9 2.9E-25 6.2E-30 259.5 1.8 198 163-395 1-206 (288)
169 KOG0319 WD40-repeat-containing 99.9 2.9E-24 6.3E-29 257.8 10.3 236 1258-1565 346-600 (775)
170 PLN03225 Serine/threonine-prot 99.9 4.7E-25 1E-29 280.2 3.6 174 160-361 130-329 (566)
171 KOG1151 Tousled-like protein k 99.9 6.4E-25 1.4E-29 249.8 3.6 222 161-405 462-695 (775)
172 cd07874 STKc_JNK3 Catalytic do 99.9 2.8E-25 6E-30 268.5 0.4 196 160-394 15-216 (355)
173 KOG0296 Angio-associated migra 99.9 1.1E-23 2.3E-28 236.3 12.9 258 1274-1566 55-380 (399)
174 KOG0284 Polyadenylation factor 99.9 9.6E-25 2.1E-29 247.0 4.4 216 1282-1564 97-316 (464)
175 KOG0273 Beta-transducin family 99.9 1.1E-23 2.5E-28 241.9 13.3 253 1285-1566 237-505 (524)
176 KOG4645 MAPKKK (MAP kinase kin 99.9 1.9E-25 4.1E-30 282.9 -2.2 201 163-395 1236-1440(1509)
177 cd07875 STKc_JNK1 Catalytic do 99.9 4.4E-25 9.6E-30 267.7 0.9 196 160-394 22-223 (364)
178 cd07868 STKc_CDK8 Catalytic do 99.9 4.8E-25 1E-29 261.7 0.3 196 167-395 6-215 (317)
179 PRK13184 pknD serine/threonine 99.9 6.9E-25 1.5E-29 283.5 1.6 211 162-395 2-230 (932)
180 cd06649 PKc_MEK2 Catalytic dom 99.9 6.3E-25 1.4E-29 263.0 1.2 196 161-395 4-201 (331)
181 cd05106 PTKc_CSF-1R Catalytic 99.9 6.2E-25 1.4E-29 267.6 0.8 206 161-394 37-313 (374)
182 cd05608 STKc_GRK1 Catalytic do 99.9 5.3E-25 1.2E-29 257.1 -0.1 192 170-395 1-196 (280)
183 PHA03209 serine/threonine kina 99.9 8.2E-25 1.8E-29 264.9 1.3 180 162-378 66-245 (357)
184 PTZ00267 NIMA-related protein 99.9 6.9E-25 1.5E-29 275.5 0.7 201 162-395 67-270 (478)
185 KOG0273 Beta-transducin family 99.9 3.3E-23 7.2E-28 238.2 14.2 258 1282-1566 177-464 (524)
186 KOG0292 Vesicle coat complex C 99.9 1.4E-23 3.1E-28 253.7 11.4 249 1279-1565 47-303 (1202)
187 KOG0664 Nemo-like MAPK-related 99.9 1.2E-25 2.7E-30 243.1 -6.3 189 162-378 53-247 (449)
188 cd05096 PTKc_DDR1 Catalytic do 99.9 1.2E-24 2.6E-29 256.9 1.3 198 161-378 4-229 (304)
189 cd05586 STKc_Sck1_like Catalyt 99.9 7.2E-25 1.6E-29 262.2 -1.0 189 170-394 1-195 (330)
190 cd05064 PTKc_EphR_A10 Catalyti 99.9 8.3E-25 1.8E-29 253.2 -0.8 192 162-378 5-197 (266)
191 KOG0196 Tyrosine kinase, EPH ( 99.9 2E-24 4.3E-29 261.5 2.2 231 163-421 630-862 (996)
192 KOG0276 Vesicle coat complex C 99.9 9.5E-24 2.1E-28 248.1 7.4 212 1289-1564 63-279 (794)
193 KOG1026 Nerve growth factor re 99.9 2.6E-24 5.7E-29 266.9 2.9 219 163-407 487-718 (774)
194 cd05630 STKc_GRK6 Catalytic do 99.9 1.2E-24 2.7E-29 254.7 -0.1 198 163-395 1-200 (285)
195 cd05104 PTKc_Kit Catalytic dom 99.9 2E-24 4.4E-29 263.2 1.7 203 161-391 34-311 (375)
196 KOG0285 Pleiotropic regulator 99.9 2.9E-23 6.3E-28 231.1 10.5 186 1319-1565 143-330 (460)
197 KOG1152 Signal transduction se 99.9 1.3E-24 2.8E-29 255.7 -0.3 195 159-378 558-758 (772)
198 cd05607 STKc_GRK7 Catalytic do 99.9 1.3E-24 2.8E-29 253.5 -0.6 192 170-395 1-193 (277)
199 cd06650 PKc_MEK1 Catalytic dom 99.9 1.4E-24 3.1E-29 260.2 -0.3 195 161-394 4-200 (333)
200 KOG1095 Protein tyrosine kinas 99.9 2.3E-24 5E-29 276.3 1.2 217 163-405 693-915 (1025)
201 KOG0614 cGMP-dependent protein 99.9 5.3E-25 1.2E-29 255.2 -4.5 199 161-395 419-618 (732)
202 cd05632 STKc_GRK5 Catalytic do 99.9 2.1E-24 4.5E-29 252.7 0.2 198 163-395 1-200 (285)
203 PLN03224 probable serine/threo 99.9 1.4E-23 2.9E-28 261.0 7.4 189 160-362 143-383 (507)
204 PHA03210 serine/threonine kina 99.9 2.9E-24 6.3E-29 271.1 1.4 203 160-393 146-365 (501)
205 PTZ00284 protein kinase; Provi 99.9 3.6E-24 7.8E-29 268.5 2.0 195 161-395 128-344 (467)
206 PHA03211 serine/threonine kina 99.9 2.2E-24 4.8E-29 268.0 -0.5 184 161-378 168-351 (461)
207 KOG1035 eIF-2alpha kinase GCN2 99.9 2.4E-24 5.2E-29 272.1 -1.6 203 158-378 475-807 (1351)
208 cd08219 STKc_Nek3 Catalytic do 99.9 2.8E-24 6.1E-29 246.5 -0.9 199 163-396 1-200 (255)
209 PTZ00266 NIMA-related protein 99.9 4.2E-24 9.2E-29 277.1 0.3 202 161-395 12-242 (1021)
210 cd05105 PTKc_PDGFR_alpha Catal 99.9 5.7E-24 1.2E-28 260.9 1.3 197 161-378 36-328 (400)
211 cd07839 STKc_CDK5 Catalytic do 99.9 6E-24 1.3E-28 247.8 1.3 197 163-394 1-198 (284)
212 cd06625 STKc_MEKK3_like Cataly 99.9 3.4E-24 7.4E-29 246.6 -0.7 204 162-395 2-206 (263)
213 KOG0645 WD40 repeat protein [G 99.9 1.2E-22 2.7E-27 220.2 10.8 245 1279-1565 10-291 (312)
214 cd08529 STKc_FA2-like Catalyti 99.9 7.9E-24 1.7E-28 242.4 1.4 199 163-395 1-200 (256)
215 KOG0315 G-protein beta subunit 99.9 6E-23 1.3E-27 219.9 8.0 244 1300-1566 12-270 (311)
216 cd07867 STKc_CDC2L6 Catalytic 99.9 6.2E-24 1.3E-28 251.9 0.5 196 167-395 6-215 (317)
217 cd05049 PTKc_Trk Catalytic dom 99.9 6.1E-24 1.3E-28 247.0 0.4 206 161-394 4-223 (280)
218 cd07844 STKc_PCTAIRE_like Cata 99.9 1.2E-23 2.6E-28 246.4 2.5 199 161-395 4-203 (291)
219 PF00069 Pkinase: Protein kina 99.9 2.5E-24 5.5E-29 246.8 -3.2 196 164-395 1-198 (260)
220 PHA02988 hypothetical protein; 99.9 4.4E-24 9.4E-29 250.1 -1.6 188 168-395 26-221 (283)
221 cd05062 PTKc_IGF-1R Catalytic 99.9 6.7E-24 1.4E-28 246.9 -0.3 197 161-378 5-210 (277)
222 cd05580 STKc_PKA Catalytic dom 99.9 9.3E-24 2E-28 247.6 0.9 194 163-395 2-197 (290)
223 cd05108 PTKc_EGFR Catalytic do 99.9 1.4E-23 2.9E-28 249.6 2.1 204 161-395 6-211 (316)
224 cd05054 PTKc_VEGFR Catalytic d 99.9 1.5E-23 3.3E-28 251.9 2.4 205 162-394 7-274 (337)
225 cd05048 PTKc_Ror Catalytic Dom 99.9 6.3E-24 1.4E-28 247.5 -0.9 206 161-394 4-225 (283)
226 cd05033 PTKc_EphR Catalytic do 99.9 9.3E-24 2E-28 244.0 0.4 194 161-378 3-197 (266)
227 cd05035 PTKc_Axl_like Catalyti 99.9 9E-24 1.9E-28 244.3 0.2 202 164-394 1-214 (273)
228 KOG1989 ARK protein kinase fam 99.9 3.8E-24 8.1E-29 267.1 -3.2 196 163-378 38-247 (738)
229 cd05114 PTKc_Tec_Rlk Catalytic 99.9 1.5E-23 3.2E-28 240.9 1.8 195 162-394 4-200 (256)
230 cd08221 STKc_Nek9 Catalytic do 99.9 1.7E-23 3.7E-28 240.0 2.3 199 163-395 1-200 (256)
231 cd08227 PK_STRAD_alpha Pseudok 99.9 1.2E-23 2.6E-28 251.4 0.9 203 166-395 2-209 (327)
232 KOG0276 Vesicle coat complex C 99.9 1.1E-22 2.3E-27 239.4 8.6 223 1280-1565 10-238 (794)
233 KOG1407 WD40 repeat protein [F 99.9 1.8E-22 4E-27 217.7 9.1 257 1281-1566 18-284 (313)
234 cd05072 PTKc_Lyn Catalytic dom 99.9 1.3E-23 2.8E-28 241.9 0.3 197 161-394 5-203 (261)
235 KOG0671 LAMMER dual specificit 99.9 7.4E-24 1.6E-28 241.3 -2.0 187 161-378 88-298 (415)
236 cd08223 STKc_Nek4 Catalytic do 99.9 2.3E-23 5E-28 238.8 1.7 199 163-395 1-201 (257)
237 cd05090 PTKc_Ror1 Catalytic do 99.9 2.5E-23 5.4E-28 242.9 1.9 204 161-393 4-224 (283)
238 cd06619 PKc_MKK5 Catalytic dom 99.9 2E-23 4.4E-28 243.3 1.2 190 163-395 2-192 (279)
239 cd05065 PTKc_EphR_B Catalytic 99.9 1.3E-23 2.8E-28 243.2 -0.6 196 162-378 4-200 (269)
240 KOG0295 WD40 repeat-containing 99.9 1.2E-22 2.7E-27 227.5 7.1 242 1260-1542 132-406 (406)
241 KOG0584 Serine/threonine prote 99.9 1.1E-23 2.5E-28 252.7 -1.3 189 166-392 44-239 (632)
242 cd05068 PTKc_Frk_like Catalyti 99.9 3E-23 6.5E-28 239.1 2.1 196 162-394 6-203 (261)
243 cd08228 STKc_Nek6 Catalytic do 99.9 1.5E-23 3.4E-28 241.9 -0.3 200 162-395 2-205 (267)
244 cd05052 PTKc_Abl Catalytic dom 99.9 2E-23 4.3E-28 241.0 0.6 198 162-395 6-205 (263)
245 cd07870 STKc_PFTAIRE2 Catalyti 99.9 3.7E-23 8.1E-28 242.4 2.9 199 161-395 4-203 (291)
246 cd05574 STKc_phototropin_like 99.9 2.2E-23 4.8E-28 247.4 1.0 210 163-395 2-231 (316)
247 cd05113 PTKc_Btk_Bmx Catalytic 99.9 1.2E-23 2.7E-28 242.0 -1.1 196 161-394 3-200 (256)
248 cd06615 PKc_MEK Catalytic doma 99.9 2.1E-23 4.5E-28 247.1 0.6 193 163-394 2-196 (308)
249 KOG0288 WD40 repeat protein Ti 99.9 3E-22 6.6E-27 227.3 9.8 255 1280-1566 172-443 (459)
250 PTZ00421 coronin; Provisional 99.9 5.7E-22 1.2E-26 246.7 13.2 223 1279-1565 71-314 (493)
251 cd07842 STKc_CDK8_like Catalyt 99.9 2.6E-23 5.7E-28 246.0 1.2 204 163-394 1-214 (316)
252 cd05084 PTKc_Fes Catalytic dom 99.9 3.1E-23 6.8E-28 237.4 1.7 184 168-378 1-185 (252)
253 cd06646 STKc_MAP4K5 Catalytic 99.9 2.9E-23 6.2E-28 239.9 1.4 196 161-394 8-207 (267)
254 cd05059 PTKc_Tec_like Catalyti 99.9 2.7E-23 5.9E-28 238.8 1.1 186 162-378 4-190 (256)
255 cd06630 STKc_MEKK1 Catalytic d 99.9 1.8E-23 3.9E-28 241.2 -0.4 206 163-395 1-207 (268)
256 cd06652 STKc_MEKK2 Catalytic d 99.9 3.1E-23 6.6E-28 239.5 1.4 202 162-395 2-208 (265)
257 cd05053 PTKc_FGFR Catalytic do 99.9 2.4E-23 5.2E-28 244.1 0.5 197 161-378 11-223 (293)
258 KOG0318 WD40 repeat stress pro 99.9 7.1E-22 1.5E-26 229.6 12.3 262 1278-1566 185-542 (603)
259 cd06645 STKc_MAP4K3 Catalytic 99.9 2E-23 4.3E-28 241.2 -0.7 196 161-394 8-207 (267)
260 cd07847 STKc_CDKL1_4 Catalytic 99.9 4.5E-23 9.8E-28 240.3 2.4 197 162-394 1-199 (286)
261 cd05066 PTKc_EphR_A Catalytic 99.9 1.8E-23 3.9E-28 241.9 -1.1 194 162-378 4-198 (267)
262 PLN00009 cyclin-dependent kina 99.9 3.8E-23 8.3E-28 242.6 1.6 201 162-395 2-203 (294)
263 cd05067 PTKc_Lck_Blk Catalytic 99.9 1.9E-23 4.1E-28 240.5 -1.0 197 161-395 5-203 (260)
264 cd07865 STKc_CDK9 Catalytic do 99.9 4.7E-23 1E-27 243.0 2.4 208 156-394 6-222 (310)
265 KOG0292 Vesicle coat complex C 99.9 5.8E-22 1.3E-26 240.0 11.6 217 1288-1564 16-260 (1202)
266 cd07850 STKc_JNK Catalytic dom 99.9 2.7E-23 5.9E-28 251.1 0.3 196 160-394 14-215 (353)
267 cd05148 PTKc_Srm_Brk Catalytic 99.9 3.6E-23 7.8E-28 238.0 1.3 197 161-394 5-203 (261)
268 cd05101 PTKc_FGFR2 Catalytic d 99.9 2.3E-23 5E-28 246.0 -0.4 198 161-378 14-228 (304)
269 cd06631 STKc_YSK4 Catalytic do 99.9 2.8E-23 6.1E-28 239.6 0.2 206 163-395 1-207 (265)
270 cd05103 PTKc_VEGFR2 Catalytic 99.9 4.6E-23 1E-27 248.2 2.0 197 161-378 6-270 (343)
271 cd06628 STKc_MAPKKK_Byr2_like 99.9 4.1E-23 8.9E-28 238.3 1.5 207 163-395 1-211 (267)
272 KOG2345 Serine/threonine prote 99.9 2.2E-23 4.8E-28 225.1 -0.8 197 161-378 20-230 (302)
273 cd07841 STKc_CDK7 Catalytic do 99.9 5.8E-23 1.3E-27 241.4 2.6 198 163-394 1-201 (298)
274 cd05091 PTKc_Ror2 Catalytic do 99.9 3E-23 6.5E-28 242.0 0.1 197 161-378 4-215 (283)
275 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 6.1E-23 1.3E-27 239.6 2.6 203 162-395 3-209 (283)
276 cd05088 PTKc_Tie2 Catalytic do 99.9 2.9E-23 6.2E-28 245.4 -0.2 198 161-394 6-222 (303)
277 cd08220 STKc_Nek8 Catalytic do 99.9 4.6E-23 1E-27 236.0 1.4 199 163-395 1-200 (256)
278 cd05032 PTKc_InsR_like Catalyt 99.9 2.9E-23 6.3E-28 240.9 -0.2 197 161-378 5-210 (277)
279 cd05609 STKc_MAST Catalytic do 99.9 5E-23 1.1E-27 243.3 1.7 208 163-395 2-215 (305)
280 cd06654 STKc_PAK1 Catalytic do 99.9 4.8E-23 1E-27 242.6 1.5 198 159-395 17-215 (296)
281 cd05082 PTKc_Csk Catalytic dom 99.9 3E-23 6.4E-28 238.4 -0.4 191 161-394 5-198 (256)
282 cd05093 PTKc_TrkB Catalytic do 99.9 5.8E-23 1.2E-27 240.7 2.0 204 162-394 5-221 (288)
283 cd07866 STKc_BUR1 Catalytic do 99.9 6.9E-23 1.5E-27 241.7 2.7 211 161-395 7-226 (311)
284 KOG0291 WD40-repeat-containing 99.9 1.1E-21 2.5E-26 235.3 12.9 212 1289-1566 315-532 (893)
285 cd00200 WD40 WD40 domain, foun 99.9 1.5E-21 3.3E-26 221.7 13.5 251 1280-1566 6-273 (289)
286 cd05061 PTKc_InsR Catalytic do 99.9 2.9E-23 6.3E-28 243.2 -0.7 197 161-378 5-210 (288)
287 cd07843 STKc_CDC2L1 Catalytic 99.9 4E-23 8.6E-28 242.4 0.5 201 160-395 3-206 (293)
288 cd05071 PTKc_Src Catalytic dom 99.9 5.2E-23 1.1E-27 237.7 1.4 195 161-393 5-201 (262)
289 cd05073 PTKc_Hck Catalytic dom 99.9 3.1E-23 6.7E-28 238.9 -0.5 196 161-394 5-202 (260)
290 cd05051 PTKc_DDR Catalytic dom 99.9 7E-23 1.5E-27 240.3 2.4 198 161-378 4-221 (296)
291 cd07855 STKc_ERK5 Catalytic do 99.9 5.6E-23 1.2E-27 246.3 1.6 203 161-395 4-211 (334)
292 KOG0984 Mitogen-activated prot 99.9 6.5E-23 1.4E-27 215.7 1.8 201 161-397 45-253 (282)
293 cd05034 PTKc_Src_like Catalyti 99.9 2.3E-23 5E-28 239.6 -1.7 197 161-394 5-203 (261)
294 cd06617 PKc_MKK3_6 Catalytic d 99.9 5.1E-23 1.1E-27 239.7 1.0 198 162-395 1-206 (283)
295 cd07832 STKc_CCRK Catalytic do 99.9 6.9E-23 1.5E-27 238.7 2.0 198 163-394 1-199 (286)
296 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 6.3E-23 1.4E-27 236.4 1.3 200 162-395 2-205 (267)
297 cd06637 STKc_TNIK Catalytic do 99.9 4.4E-23 9.5E-28 238.8 -0.1 198 161-395 5-215 (272)
298 cd05098 PTKc_FGFR1 Catalytic d 99.9 8.2E-23 1.8E-27 241.7 2.1 198 161-378 17-231 (307)
299 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 5.5E-23 1.2E-27 236.7 0.6 196 161-394 5-202 (260)
300 cd05045 PTKc_RET Catalytic dom 99.9 6.6E-23 1.4E-27 240.3 1.2 205 163-395 1-229 (290)
301 cd07849 STKc_ERK1_2_like Catal 99.9 6.8E-23 1.5E-27 245.8 1.2 200 161-395 4-209 (336)
302 cd05578 STKc_Yank1 Catalytic d 99.9 5.2E-23 1.1E-27 236.5 0.2 196 163-395 1-198 (258)
303 cd05055 PTKc_PDGFR Catalytic d 99.9 7E-23 1.5E-27 242.1 1.3 206 161-394 34-242 (302)
304 cd05116 PTKc_Syk Catalytic dom 99.9 8.7E-23 1.9E-27 234.8 2.0 194 169-394 2-197 (257)
305 cd05042 PTKc_Aatyk Catalytic d 99.9 5.6E-23 1.2E-27 237.9 0.3 193 168-391 1-204 (269)
306 cd06651 STKc_MEKK3 Catalytic d 99.9 7.1E-23 1.5E-27 236.8 1.2 201 163-395 3-208 (266)
307 cd05039 PTKc_Csk_like Catalyti 99.9 5E-23 1.1E-27 236.3 -0.1 183 161-378 5-188 (256)
308 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 9.8E-23 2.1E-27 238.1 2.3 202 163-393 5-209 (284)
309 cd06656 STKc_PAK3 Catalytic do 99.9 7.9E-23 1.7E-27 240.9 1.3 197 160-395 17-214 (297)
310 KOG0983 Mitogen-activated prot 99.9 3.8E-23 8.1E-28 224.9 -1.4 213 159-408 89-308 (391)
311 cd06613 STKc_MAP4K3_like Catal 99.9 1.1E-22 2.4E-27 233.7 2.4 198 161-395 2-203 (262)
312 cd05107 PTKc_PDGFR_beta Cataly 99.9 7.9E-23 1.7E-27 250.8 1.2 197 161-378 36-330 (401)
313 cd05094 PTKc_TrkC Catalytic do 99.9 1.1E-22 2.4E-27 238.6 2.4 206 161-395 4-225 (291)
314 cd05092 PTKc_TrkA Catalytic do 99.9 4.5E-23 9.7E-28 240.6 -0.9 204 162-394 5-223 (280)
315 cd08229 STKc_Nek7 Catalytic do 99.9 4.8E-23 1E-27 237.8 -0.8 199 162-394 2-204 (267)
316 KOG1094 Discoidin domain recep 99.9 3.3E-23 7.2E-28 243.9 -2.1 210 163-403 539-749 (807)
317 cd05111 PTK_HER3 Pseudokinase 99.9 1.4E-22 3E-27 236.4 3.1 199 161-394 6-210 (279)
318 cd06644 STKc_STK10_LOK Catalyt 99.9 7.7E-23 1.7E-27 239.9 0.9 198 161-395 11-214 (292)
319 cd05069 PTKc_Yes Catalytic dom 99.9 4.3E-23 9.3E-28 237.8 -1.4 195 162-394 6-202 (260)
320 cd05109 PTKc_HER2 Catalytic do 99.9 9.2E-23 2E-27 237.5 1.3 194 161-378 6-200 (279)
321 KOG0668 Casein kinase II, alph 99.9 5.6E-23 1.2E-27 218.6 -0.5 183 159-378 35-222 (338)
322 cd05075 PTKc_Axl Catalytic dom 99.9 1.1E-22 2.4E-27 235.4 1.7 192 164-378 1-203 (272)
323 KOG0587 Traf2- and Nck-interac 99.9 1E-22 2.2E-27 250.9 1.3 201 161-398 18-231 (953)
324 KOG4278 Protein tyrosine kinas 99.8 4.8E-23 1E-27 241.9 -1.7 186 164-378 269-455 (1157)
325 cd05115 PTKc_Zap-70 Catalytic 99.8 5.6E-23 1.2E-27 236.8 -1.3 185 169-378 2-187 (257)
326 cd06643 STKc_SLK Catalytic dom 99.8 9.3E-23 2E-27 237.9 0.5 197 162-395 5-207 (282)
327 cd05089 PTKc_Tie1 Catalytic do 99.8 9E-23 1.9E-27 240.3 0.2 199 162-394 2-217 (297)
328 cd06642 STKc_STK25-YSK1 Cataly 99.8 4.8E-23 1E-27 239.7 -2.1 196 162-395 4-200 (277)
329 cd06653 STKc_MEKK3_like_1 Cata 99.8 1.2E-22 2.6E-27 234.6 1.2 201 162-395 2-208 (264)
330 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.8 1.2E-22 2.7E-27 236.5 1.2 184 169-378 2-210 (274)
331 cd05097 PTKc_DDR_like Catalyti 99.8 1.5E-22 3.3E-27 238.0 2.0 198 161-378 4-220 (295)
332 cd05085 PTKc_Fer Catalytic dom 99.8 6.9E-23 1.5E-27 234.1 -0.9 191 168-394 1-193 (250)
333 cd05063 PTKc_EphR_A2 Catalytic 99.8 1.7E-22 3.8E-27 233.5 2.3 203 162-394 5-209 (268)
334 cd08218 STKc_Nek1 Catalytic do 99.8 1.1E-22 2.3E-27 233.4 0.3 199 163-395 1-200 (256)
335 cd05099 PTKc_FGFR4 Catalytic d 99.8 1.3E-22 2.8E-27 240.9 1.0 198 161-378 11-225 (314)
336 KOG0274 Cdc4 and related F-box 99.8 1.4E-21 3.1E-26 243.4 10.2 212 1279-1563 245-463 (537)
337 cd07833 STKc_CDKL Catalytic do 99.8 1.5E-22 3.2E-27 236.2 1.3 199 163-395 2-201 (288)
338 cd05100 PTKc_FGFR3 Catalytic d 99.8 1.1E-22 2.3E-27 243.9 0.0 197 162-378 12-225 (334)
339 cd06655 STKc_PAK2 Catalytic do 99.8 2.1E-22 4.6E-27 237.2 2.6 196 161-395 18-214 (296)
340 cd05036 PTKc_ALK_LTK Catalytic 99.8 1.3E-22 2.8E-27 236.1 0.7 208 161-394 5-220 (277)
341 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.8 1.7E-22 3.6E-27 235.8 1.5 202 162-393 4-208 (284)
342 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.8 1.7E-22 3.7E-27 234.0 1.5 196 168-394 1-208 (269)
343 cd05077 PTK_Jak1_rpt1 Pseudoki 99.8 1.2E-22 2.6E-27 234.9 0.1 185 168-378 1-198 (262)
344 cd08225 STKc_Nek5 Catalytic do 99.8 1.5E-22 3.3E-27 231.9 0.9 200 163-395 1-201 (257)
345 cd07846 STKc_CDKL2_3 Catalytic 99.8 1.3E-22 2.7E-27 236.8 0.3 197 162-394 1-199 (286)
346 cd05057 PTKc_EGFR_like Catalyt 99.8 2E-22 4.3E-27 234.7 2.0 204 161-395 6-211 (279)
347 PHA02882 putative serine/threo 99.8 1.7E-22 3.6E-27 237.9 1.1 216 162-395 12-232 (294)
348 cd05083 PTKc_Chk Catalytic dom 99.8 3E-22 6.5E-27 229.8 3.2 190 161-394 5-196 (254)
349 cd05040 PTKc_Ack_like Catalyti 99.8 2.7E-22 5.8E-27 230.3 2.7 198 168-395 1-200 (257)
350 KOG0576 Mitogen-activated prot 99.8 4.3E-22 9.2E-27 238.3 4.3 188 159-377 12-203 (829)
351 cd05577 STKc_GRK Catalytic dom 99.8 1.2E-22 2.6E-27 236.5 -0.4 191 170-395 1-193 (277)
352 cd05581 STKc_PDK1 Catalytic do 99.8 7.5E-23 1.6E-27 237.2 -2.3 209 163-395 2-221 (280)
353 cd05095 PTKc_DDR2 Catalytic do 99.8 2.9E-22 6.2E-27 235.7 2.6 197 162-378 5-221 (296)
354 cd06629 STKc_MAPKKK_Bck1_like 99.8 1.7E-22 3.6E-27 234.1 0.5 203 163-395 2-211 (272)
355 cd06626 STKc_MEKK4 Catalytic d 99.8 2.8E-22 6E-27 230.7 2.3 201 163-395 1-205 (264)
356 KOG1006 Mitogen-activated prot 99.8 5.5E-23 1.2E-27 223.2 -3.4 196 162-393 64-266 (361)
357 KOG0291 WD40-repeat-containing 99.8 2.7E-21 5.9E-26 232.0 10.7 270 1258-1551 330-621 (893)
358 cd05633 STKc_GRK3 Catalytic do 99.8 1.7E-22 3.6E-27 236.0 0.4 190 169-395 1-195 (279)
359 KOG4257 Focal adhesion tyrosin 99.8 2.1E-22 4.7E-27 237.7 1.3 191 163-378 390-581 (974)
360 cd06607 STKc_TAO Catalytic dom 99.8 2E-22 4.3E-27 238.4 0.9 196 161-395 14-213 (307)
361 cd05050 PTKc_Musk Catalytic do 99.8 1.2E-22 2.5E-27 237.8 -1.1 197 161-378 4-221 (288)
362 cd06609 STKc_MST3_like Catalyt 99.8 1.6E-22 3.6E-27 234.6 0.0 196 162-395 1-197 (274)
363 cd07835 STKc_CDK1_like Catalyt 99.8 3E-22 6.4E-27 233.5 2.2 197 164-394 1-198 (283)
364 PF07714 Pkinase_Tyr: Protein 99.8 3.1E-23 6.8E-28 239.5 -6.1 198 165-391 2-200 (259)
365 KOG0603 Ribosomal protein S6 k 99.8 4.4E-22 9.4E-27 240.4 3.5 189 161-395 321-512 (612)
366 cd06610 STKc_OSR1_SPAK Catalyt 99.8 2.5E-22 5.3E-27 231.3 1.2 203 162-395 1-206 (267)
367 cd05074 PTKc_Tyro3 Catalytic d 99.8 1.9E-22 4.1E-27 233.7 0.1 202 164-394 1-214 (273)
368 cd07877 STKc_p38alpha_MAPK14 C 99.8 2.3E-22 4.9E-27 242.4 0.5 197 158-394 13-216 (345)
369 cd07864 STKc_CDK12 Catalytic d 99.8 3.7E-22 8.1E-27 234.8 2.3 202 160-395 5-217 (302)
370 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.8 4.6E-22 1E-26 229.1 3.0 192 168-392 1-201 (258)
371 cd07836 STKc_Pho85 Catalytic d 99.8 2.6E-22 5.6E-27 233.9 0.9 197 163-394 1-199 (284)
372 cd00192 PTKc Catalytic domain 99.8 3.7E-22 7.9E-27 228.4 2.1 188 168-378 1-196 (262)
373 cd05606 STKc_beta_ARK Catalyti 99.8 2.5E-22 5.4E-27 234.3 0.5 192 169-395 1-195 (278)
374 cd06638 STKc_myosinIIIA Cataly 99.8 2.4E-22 5.3E-27 234.5 0.4 198 160-394 16-227 (286)
375 cd07834 STKc_MAPK Catalytic do 99.8 3E-22 6.6E-27 239.1 1.2 199 163-394 1-205 (330)
376 KOG0281 Beta-TrCP (transducin 99.8 4.8E-22 1E-26 220.1 2.5 201 1326-1565 196-411 (499)
377 KOG0283 WD40 repeat-containing 99.8 2.5E-21 5.3E-26 237.8 8.8 227 1281-1542 265-576 (712)
378 cd05613 STKc_MSK1_N N-terminal 99.8 3.3E-22 7.2E-27 234.2 1.2 202 163-395 1-207 (290)
379 cd06632 STKc_MEKK1_plant Catal 99.8 3.8E-22 8.2E-27 228.5 1.6 196 163-395 1-201 (258)
380 cd06620 PKc_MAPKK_Byr1_like Ca 99.8 2.2E-22 4.7E-27 235.2 -0.4 196 161-395 4-201 (284)
381 cd08217 STKc_Nek2 Catalytic do 99.8 2.7E-22 5.9E-27 230.2 0.3 199 163-395 1-209 (265)
382 cd07857 STKc_MPK1 Catalytic do 99.8 3.4E-22 7.4E-27 239.3 1.1 202 163-394 1-208 (332)
383 cd05043 PTK_Ryk Pseudokinase d 99.8 1.6E-22 3.5E-27 235.4 -1.7 205 161-394 5-218 (280)
384 KOG0670 U4/U6-associated splic 99.8 1.7E-22 3.7E-27 235.0 -1.5 204 162-397 432-642 (752)
385 cd05060 PTKc_Syk_like Catalyti 99.8 4.1E-22 8.8E-27 229.1 1.5 195 168-394 1-197 (257)
386 cd06612 STKc_MST1_2 Catalytic 99.8 3.3E-22 7.2E-27 228.9 0.5 195 162-395 3-198 (256)
387 cd06658 STKc_PAK5 Catalytic do 99.8 2.1E-22 4.5E-27 236.9 -1.5 195 162-395 22-217 (292)
388 cd07852 STKc_MAPK15 Catalytic 99.8 3.7E-22 8E-27 239.4 0.6 204 160-395 5-212 (337)
389 cd05044 PTKc_c-ros Catalytic d 99.8 6E-22 1.3E-26 228.9 2.1 202 168-394 1-212 (269)
390 cd05112 PTKc_Itk Catalytic dom 99.8 4.5E-22 9.8E-27 228.2 1.0 186 162-378 4-190 (256)
391 cd05086 PTKc_Aatyk2 Catalytic 99.8 5.9E-22 1.3E-26 229.7 2.0 187 168-378 1-197 (268)
392 cd05046 PTK_CCK4 Pseudokinase 99.8 5E-22 1.1E-26 230.6 1.2 195 162-378 5-207 (275)
393 cd05110 PTKc_HER4 Catalytic do 99.8 2.7E-22 5.9E-27 237.0 -1.2 190 161-378 6-200 (303)
394 cd07856 STKc_Sty1_Hog1 Catalyt 99.8 6.1E-22 1.3E-26 237.0 1.7 195 160-394 8-204 (328)
395 cd07831 STKc_MOK Catalytic dom 99.8 5.8E-22 1.3E-26 230.5 1.5 193 164-394 1-197 (282)
396 cd05058 PTKc_Met_Ron Catalytic 99.8 6.1E-22 1.3E-26 227.9 1.6 196 168-392 1-198 (262)
397 cd06659 STKc_PAK6 Catalytic do 99.8 3.3E-22 7.2E-27 235.7 -0.6 194 163-395 22-216 (297)
398 cd06647 STKc_PAK_I Catalytic d 99.8 6.5E-22 1.4E-26 232.7 1.6 196 161-395 18-214 (293)
399 KOG0277 Peroxisomal targeting 99.8 5.7E-21 1.2E-25 205.5 8.6 204 1301-1564 76-288 (311)
400 cd07879 STKc_p38delta_MAPK13 C 99.8 7E-22 1.5E-26 237.8 1.8 196 159-395 12-214 (342)
401 KOG0278 Serine/threonine kinas 99.8 4E-21 8.7E-26 205.7 7.3 236 1278-1550 54-305 (334)
402 cd06640 STKc_MST4 Catalytic do 99.8 5E-22 1.1E-26 231.3 0.4 196 162-395 4-200 (277)
403 PTZ00420 coronin; Provisional 99.8 1.5E-20 3.2E-25 235.1 13.6 228 1278-1566 69-318 (568)
404 smart00219 TyrKc Tyrosine kina 99.8 8.5E-22 1.8E-26 225.4 2.2 192 164-378 1-193 (258)
405 KOG0308 Conserved WD40 repeat- 99.8 4.4E-21 9.6E-26 227.5 8.2 218 1290-1565 34-266 (735)
406 KOG0318 WD40 repeat stress pro 99.8 1.6E-20 3.5E-25 218.4 12.5 269 1280-1566 144-499 (603)
407 cd06635 STKc_TAO1 Catalytic do 99.8 7.5E-22 1.6E-26 234.9 1.4 195 161-394 24-222 (317)
408 cd05056 PTKc_FAK Catalytic dom 99.8 4.4E-22 9.5E-27 230.6 -0.6 191 162-378 6-197 (270)
409 KOG0665 Jun-N-terminal kinase 99.8 7.9E-22 1.7E-26 220.1 1.5 185 161-378 16-206 (369)
410 cd08226 PK_STRAD_beta Pseudoki 99.8 4.3E-22 9.2E-27 238.1 -0.8 200 168-394 4-208 (328)
411 cd05038 PTKc_Jak_rpt2 Catalyti 99.8 9.8E-22 2.1E-26 228.6 2.0 205 162-395 4-211 (284)
412 KOG0267 Microtubule severing p 99.8 3.9E-21 8.5E-26 230.1 7.2 207 1299-1566 41-250 (825)
413 KOG0316 Conserved WD40 repeat- 99.8 7.4E-21 1.6E-25 202.3 8.5 185 1317-1566 7-195 (307)
414 cd05572 STKc_cGK_PKG Catalytic 99.8 6E-22 1.3E-26 228.2 0.2 189 170-394 1-190 (262)
415 KOG0266 WD40 repeat-containing 99.8 9.2E-21 2E-25 236.1 10.8 231 1280-1542 200-454 (456)
416 cd05037 PTK_Jak_rpt1 Pseudokin 99.8 8.1E-22 1.8E-26 226.1 1.2 183 168-378 1-195 (259)
417 cd07838 STKc_CDK4_6_like Catal 99.8 8.3E-22 1.8E-26 229.6 1.1 196 164-394 1-204 (287)
418 cd06641 STKc_MST3 Catalytic do 99.8 7.6E-22 1.7E-26 229.7 0.8 196 162-395 4-200 (277)
419 KOG0647 mRNA export protein (c 99.8 1.6E-20 3.4E-25 206.6 10.9 248 1288-1566 34-305 (347)
420 KOG0319 WD40-repeat-containing 99.8 3.9E-21 8.4E-26 231.2 6.6 199 1280-1541 408-618 (775)
421 cd06633 STKc_TAO3 Catalytic do 99.8 1E-21 2.2E-26 233.4 1.5 197 160-395 19-219 (313)
422 cd06605 PKc_MAPKK Catalytic do 99.8 3.1E-22 6.7E-27 230.6 -3.0 194 163-394 2-197 (265)
423 cd07840 STKc_CDK9_like Catalyt 99.8 1.1E-21 2.5E-26 228.2 1.7 198 164-395 1-201 (287)
424 cd06624 STKc_ASK Catalytic dom 99.8 1.1E-21 2.4E-26 226.9 1.4 195 164-395 10-210 (268)
425 cd06621 PKc_MAPKK_Pek1_like Ca 99.8 1E-21 2.2E-26 230.1 1.0 197 162-395 1-202 (287)
426 cd06623 PKc_MAPKK_plant_like C 99.8 1E-21 2.2E-26 225.7 0.7 196 163-395 2-199 (264)
427 cd06917 STKc_NAK1_like Catalyt 99.8 1.2E-21 2.6E-26 227.7 1.2 195 163-395 2-201 (277)
428 cd06639 STKc_myosinIIIB Cataly 99.8 8.5E-22 1.8E-26 230.9 -0.0 198 161-395 21-232 (291)
429 cd07829 STKc_CDK_like Catalyti 99.8 2E-21 4.4E-26 225.7 3.1 196 164-394 1-197 (282)
430 KOG0199 ACK and related non-re 99.8 6.3E-22 1.4E-26 236.6 -1.2 195 160-378 108-304 (1039)
431 cd08215 STKc_Nek Catalytic dom 99.8 1.1E-21 2.3E-26 224.1 0.7 199 163-395 1-202 (258)
432 cd06616 PKc_MKK4 Catalytic dom 99.8 4.6E-22 1E-26 232.6 -2.4 198 162-395 4-209 (288)
433 cd05041 PTKc_Fes_like Catalyti 99.8 1.1E-21 2.4E-26 224.3 0.7 189 168-391 1-190 (251)
434 cd08530 STKc_CNK2-like Catalyt 99.8 1.2E-21 2.5E-26 224.2 0.8 197 163-395 1-200 (256)
435 KOG1446 Histone H3 (Lys4) meth 99.8 6.1E-20 1.3E-24 204.2 14.3 250 1284-1565 15-286 (311)
436 cd08216 PK_STRAD Pseudokinase 99.8 1.3E-21 2.8E-26 231.9 1.1 202 164-394 4-208 (314)
437 cd05611 STKc_Rim15_like Cataly 99.8 1E-21 2.3E-26 225.9 0.2 189 167-395 1-192 (260)
438 PHA03390 pk1 serine/threonine- 99.8 1.3E-21 2.9E-26 226.9 0.9 189 161-395 13-205 (267)
439 cd06627 STKc_Cdc7_like Catalyt 99.8 1.7E-21 3.8E-26 222.2 1.4 197 163-395 1-198 (254)
440 KOG0640 mRNA cleavage stimulat 99.8 1.3E-20 2.8E-25 206.7 8.0 214 1278-1552 107-345 (430)
441 cd05047 PTKc_Tie Catalytic dom 99.8 7.4E-22 1.6E-26 228.9 -1.9 191 168-394 1-210 (270)
442 cd05118 STKc_CMGC Catalytic do 99.8 1.4E-21 3.1E-26 227.2 0.3 196 164-394 1-197 (283)
443 cd08222 STKc_Nek11 Catalytic d 99.8 1.9E-21 4.2E-26 223.7 1.2 198 163-395 1-204 (260)
444 cd05579 STKc_MAST_like Catalyt 99.8 1.2E-21 2.6E-26 224.8 -0.6 198 170-395 1-200 (265)
445 cd07830 STKc_MAK_like Catalyti 99.8 2E-21 4.4E-26 226.3 1.2 195 164-394 1-197 (283)
446 KOG0294 WD40 repeat-containing 99.8 3.8E-20 8.2E-25 204.6 9.7 250 1277-1562 37-305 (362)
447 cd05583 STKc_MSK_N N-terminal 99.8 2.3E-21 5.1E-26 226.8 0.3 201 163-395 1-207 (288)
448 KOG0265 U5 snRNP-specific prot 99.8 7.6E-20 1.6E-24 201.2 11.6 216 1320-1566 40-278 (338)
449 cd06634 STKc_TAO2 Catalytic do 99.8 2.6E-21 5.5E-26 229.3 -0.1 196 161-395 14-213 (308)
450 cd06606 STKc_MAPKKK Catalytic 99.8 3.8E-21 8.2E-26 219.2 1.0 199 163-395 1-202 (260)
451 KOG0300 WD40 repeat-containing 99.8 3.6E-20 7.7E-25 203.2 8.4 219 1279-1563 144-407 (481)
452 KOG0640 mRNA cleavage stimulat 99.8 3.5E-20 7.6E-25 203.3 8.3 239 1270-1566 159-408 (430)
453 KOG0643 Translation initiation 99.8 1.2E-19 2.6E-24 196.5 12.3 211 1322-1564 5-241 (327)
454 cd06648 STKc_PAK_II Catalytic 99.8 4.3E-21 9.4E-26 224.7 1.2 194 163-395 20-214 (285)
455 KOG2052 Activin A type IB rece 99.8 6.8E-21 1.5E-25 220.2 2.4 185 160-378 209-415 (513)
456 PTZ00421 coronin; Provisional 99.8 1.4E-19 3.1E-24 225.3 14.2 206 1301-1566 35-271 (493)
457 cd06618 PKc_MKK7 Catalytic dom 99.8 4.9E-21 1.1E-25 225.3 0.8 198 161-395 14-217 (296)
458 KOG1025 Epidermal growth facto 99.8 4.4E-21 9.5E-26 233.0 0.4 207 163-398 697-904 (1177)
459 cd06614 STKc_PAK Catalytic dom 99.8 4.3E-21 9.3E-26 224.4 0.2 197 161-395 18-215 (286)
460 KOG0274 Cdc4 and related F-box 99.8 3.8E-20 8.2E-25 230.8 8.5 197 1301-1563 221-422 (537)
461 cd05122 PKc_STE Catalytic doma 99.8 5.8E-21 1.3E-25 216.8 0.8 195 163-395 1-196 (253)
462 cd05576 STKc_RPK118_like Catal 99.8 5.4E-21 1.2E-25 217.7 0.5 177 173-395 4-181 (237)
463 KOG0973 Histone transcription 99.8 1.3E-19 2.7E-24 227.5 12.4 229 1289-1566 21-337 (942)
464 PTZ00420 coronin; Provisional 99.8 1.4E-19 3E-24 226.4 12.2 193 1302-1551 48-258 (568)
465 cd06657 STKc_PAK4 Catalytic do 99.8 5.3E-21 1.1E-25 225.1 -1.0 194 163-395 21-215 (292)
466 KOG0310 Conserved WD40 repeat- 99.8 1.4E-19 3.1E-24 210.0 10.8 216 1283-1566 68-291 (487)
467 KOG0645 WD40 repeat protein [G 99.8 1.3E-19 2.9E-24 196.9 9.6 230 1281-1542 59-311 (312)
468 KOG1786 Lysosomal trafficking 99.8 2.2E-20 4.8E-25 247.5 4.3 185 367-558 873-1081(1081)
469 cd08528 STKc_Nek10 Catalytic d 99.8 6.9E-21 1.5E-25 220.3 -0.5 203 163-395 1-212 (269)
470 KOG0278 Serine/threonine kinas 99.8 2.7E-20 5.8E-25 199.4 3.9 231 1279-1566 10-279 (334)
471 cd05123 STKc_AGC Catalytic dom 99.8 9.4E-21 2E-25 216.1 0.4 191 170-395 1-192 (250)
472 KOG0282 mRNA splicing factor [ 99.8 5.3E-20 1.2E-24 213.1 5.8 227 1278-1540 253-503 (503)
473 KOG0641 WD40 repeat protein [G 99.8 2.9E-19 6.2E-24 188.4 10.7 227 1277-1565 26-284 (350)
474 KOG0643 Translation initiation 99.8 1.9E-19 4.1E-24 195.0 9.1 258 1282-1566 9-299 (327)
475 PLN00113 leucine-rich repeat r 99.8 2.5E-20 5.5E-25 254.1 1.7 188 160-397 688-879 (968)
476 KOG0289 mRNA splicing factor [ 99.8 3.3E-19 7.2E-24 203.6 10.1 208 1300-1566 233-444 (506)
477 KOG0299 U3 snoRNP-associated p 99.8 4E-19 8.8E-24 204.8 10.7 255 1280-1566 139-437 (479)
478 KOG1027 Serine/threonine prote 99.8 1.1E-20 2.5E-25 232.0 -2.6 186 164-378 511-703 (903)
479 KOG0275 Conserved WD40 repeat- 99.8 3E-19 6.5E-24 196.2 8.4 230 1275-1540 255-507 (508)
480 KOG0308 Conserved WD40 repeat- 99.8 2E-19 4.3E-24 213.7 7.5 199 1280-1544 70-287 (735)
481 KOG0313 Microtubule binding pr 99.8 6.5E-19 1.4E-23 198.8 11.1 230 1278-1542 139-418 (423)
482 KOG3653 Transforming growth fa 99.8 4.7E-20 1E-24 214.7 1.6 185 161-378 209-413 (534)
483 cd00200 WD40 WD40 domain, foun 99.8 2.5E-18 5.4E-23 195.2 12.8 216 1320-1566 2-231 (289)
484 PRK09188 serine/threonine prot 99.8 8E-20 1.7E-24 218.7 -0.3 171 161-363 17-194 (365)
485 KOG0296 Angio-associated migra 99.7 1.8E-17 4E-22 186.6 16.8 232 1318-1564 55-337 (399)
486 KOG0200 Fibroblast/platelet-de 99.7 1.3E-19 2.8E-24 232.9 -0.9 209 163-397 297-524 (609)
487 KOG1345 Serine/threonine kinas 99.7 9.9E-20 2.2E-24 198.4 -2.4 198 157-395 19-224 (378)
488 KOG0264 Nucleosome remodeling 99.7 3E-18 6.6E-23 198.2 8.6 209 1298-1565 137-384 (422)
489 KOG0310 Conserved WD40 repeat- 99.7 8.2E-18 1.8E-22 195.6 11.3 211 1289-1566 34-250 (487)
490 KOG1167 Serine/threonine prote 99.7 6.9E-19 1.5E-23 203.8 2.3 207 159-393 33-275 (418)
491 PLN00181 protein SPA1-RELATED; 99.7 5.3E-18 1.1E-22 226.0 10.8 215 1301-1541 548-792 (793)
492 KOG0264 Nucleosome remodeling 99.7 3.9E-18 8.5E-23 197.3 8.2 241 1244-1542 133-404 (422)
493 KOG0641 WD40 repeat protein [G 99.7 2.6E-17 5.6E-22 173.8 12.4 224 1282-1565 88-330 (350)
494 KOG0293 WD40 repeat-containing 99.7 8.2E-18 1.8E-22 190.9 9.2 230 1278-1542 264-513 (519)
495 KOG0283 WD40 repeat-containing 99.7 1.3E-17 2.7E-22 205.5 11.0 185 1319-1565 258-512 (712)
496 KOG0306 WD40-repeat-containing 99.7 6.2E-18 1.3E-22 203.4 8.1 198 1280-1543 451-665 (888)
497 KOG0590 Checkpoint kinase and 99.7 5.7E-18 1.2E-22 215.2 7.9 197 161-378 19-219 (601)
498 KOG1163 Casein kinase (serine/ 99.7 1.2E-18 2.7E-23 187.2 1.5 200 161-389 14-216 (341)
499 KOG0646 WD40 repeat protein [G 99.7 1.2E-17 2.6E-22 193.2 9.6 216 1284-1564 82-329 (476)
500 KOG0277 Peroxisomal targeting 99.7 4.1E-18 8.9E-23 183.7 5.3 222 1253-1541 80-308 (311)
No 1
>cd06071 Beach BEACH (Beige and Chediak-Higashi) domains, implicated in membrane trafficking, are present in a family of proteins conserved throughout eukaryotes. This group contains human lysosomal trafficking regulator (LYST), LPS-responsive and beige-like anchor (LRBA) and neurobeachin. Disruption of LYST leads to Chediak-Higashi syndrome, characterized by severe immunodeficiency, albinism, poor blood coagulation and neurologic problems. Neurobeachin is a candidate gene linked to autism. LBRA seems to be upregulated in several cancer types. It has been shown that the BEACH domain itself is important for the function of these proteins.
Probab=100.00 E-value=1.4e-65 Score=580.38 Aligned_cols=233 Identities=40% Similarity=0.674 Sum_probs=204.1
Q ss_pred cccccccccCCchhhhHHHhhcccccCCccceeecceeE-eeccC-CCCCCCcccccccccccccccCCcceee-e----
Q 000399 370 FNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGDEQLDF-T---- 442 (1566)
Q Consensus 370 ~d~Ws~G~isnfeyL~~ln~~agrs~~dl~q~pv~pwv~-d~~~~-~~~~~~~~~rdLskp~~~l~~~~~~~~~-~---- 442 (1566)
++.|..|+||||+|||.||.++||+++|++||||||||+ ||.++ .|++++..||||+||||++++++.+... .
T Consensus 1 T~~W~~g~iSNfeYL~~LN~~sGRSf~D~sqYPIfPWvi~dy~s~~ldl~~~~~~RDLskpigal~~~r~~~~~~~~~~~ 80 (275)
T cd06071 1 TKKWQNGEISNFEYLMYLNTLAGRSFNDLSQYPIFPWVISDYTSEELDLNDPSTYRDLSKPIGALNKERLQLLKERYESD 80 (275)
T ss_pred CchhhcCCccHHHHHHHHHHHhCCCCCCcccCCccCeeecCCCCcccccCCcccccCCCCchhhcCHHHHHHHHHHHhhh
Confidence 468999999999999999999999999999999999999 77765 5889999999999999999987655432 2
Q ss_pred eecCCCCccccHhhhhhhccccccccccchhHHHHhhhhcc--CCCCCchhhhhhh----c--cCCCCccCccccCcchh
Q 000399 443 YSSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVY--EPNEYPSTMQRLY----Q--WTPDECIPEFYCDPQIF 514 (1566)
Q Consensus 443 ~~~~~~~~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~~~--~~~~~~~~~~~~~----~--~~~~EliPEff~~p~~~ 514 (1566)
....+.|+||+++|+++++|++||+|++|||.+++.++++. .+++.+.++...+ . +|++|||||||++||||
T Consensus 81 ~~~~~~~~~y~shyS~~~~V~~yLvR~ePft~~~~~lq~g~fd~~~RlF~si~~~~~~~~~~~~d~~ELIPEFf~~Pe~f 160 (275)
T cd06071 81 SDDSDPPFHYGSHYSNPAIVLYYLVRLEPFTTLHLSLQGGHFDAADRLFNSIPSSWRSASENPSDVKELIPEFYYLPEFF 160 (275)
T ss_pred cccCCCCCCCCCCCCCHHHHHHHHhHcCCccHHHHHHhcCCcCCcccchhhHHHHHHHHHccCCCcccCCchHhcCHHHH
Confidence 23456789999999999999999999999999999888753 3466665554443 3 78999999999999999
Q ss_pred hccCC---------CCcccccCCCCCChHHHHHHhhhhhcccccceeeeeeEEeeeecccccccccccccccccCCCCCC
Q 000399 515 YSQHP---------GMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTK 585 (1566)
Q Consensus 515 ~~~~~---------~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDLifG~kq~g~~a~~a~Nvf~~~~~~~~ 585 (1566)
+|.|. .|+||+||+||++|++||++||+||||+|||+|||+||||||||||+|++|++|+|||+|.+++..
T Consensus 161 ~N~n~~~lg~~~g~~~~DV~LP~Wa~s~~~FV~~~R~aLES~~VS~~L~~WIDLIFG~kq~G~~A~~a~Nvf~p~~Y~~~ 240 (275)
T cd06071 161 LNINKFDFGKQDGEKVNDVELPPWAKSPEEFIRKHREALESEYVSKNLHHWIDLIFGYKQRGEEAVKAKNVFHPLTYEGS 240 (275)
T ss_pred hCCCcccccccCCCcccceecCCCcCCHHHHHHHHHHHHcccHhhhhhhhhhhhhcccccCCHHHHHhcCCCcccccCCc
Confidence 99763 389999999999999999999999999999999999999999999999999999999999987632
Q ss_pred ----------------Ccccc--ccccccCCCCcc
Q 000399 586 ----------------PKSVG--RLQLFTQPHPVR 602 (1566)
Q Consensus 586 ----------------~~~~g--~~qlF~~pHp~r 602 (1566)
...+| |.|||++|||+|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~Gq~P~QLF~~pHP~R 275 (275)
T cd06071 241 VDLDSIDVEREAIEAQINNFGQTPVQLFTKPHPKR 275 (275)
T ss_pred cccchhhHHHHHHHHHHHhcCCCcchhccCCCCCC
Confidence 13456 899999999998
No 2
>PF02138 Beach: Beige/BEACH domain; InterPro: IPR000409 The BEACH domain is found in eukaryotic proteins that have diverse cellular functions ranging from lysosomal traffic to apoptosis and cytokinesisin vesicle trafficking, membrane dynamics, and receptor signaling. The name BEACH is derived from beige and Chediak-Higashi syndrome (CHS). CHS is a rare, autosomal recessive disorder that can cause severe immunodeficiency and albinism in humans and other mammals, and beige is the name for the CHS disease in mice [, ]. The BEACH domain was first described in the lysosomal-trafficking regulators Beige protein and its human homologue CHS protein Q99698 from SWISSPROT. It is also found in distantly related proteins like, for example, the FAN proteins O35242 from SWISSPROT and Q92636 from SWISSPROT which are factor associated with neutral sphingomyelinase activation []. It has also been described in Dictyostelium proteins Lvs []. The BEACH domain is usually followed by a series of WD repeats (PDOC00574 from PROSITEDOC). The function of the BEACH domain is unknown.; PDB: 1MI1_B 1T77_C.
Probab=100.00 E-value=3.2e-64 Score=570.70 Aligned_cols=233 Identities=41% Similarity=0.672 Sum_probs=159.6
Q ss_pred cccccccccCCchhhhHHHhhcccccCCccceeecceeE-eeccC-CCCCCCcccccccccccccccCC-cceeeeee--
Q 000399 370 FNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGD-EQLDFTYS-- 444 (1566)
Q Consensus 370 ~d~Ws~G~isnfeyL~~ln~~agrs~~dl~q~pv~pwv~-d~~~~-~~~~~~~~~rdLskp~~~l~~~~-~~~~~~~~-- 444 (1566)
++.|..|+||||+|||.||.+|||+++|++||||||||+ ||.++ .|++++..||||+||||++++.+ +.+...|.
T Consensus 1 T~~W~~g~iSNfeYL~~LN~~aGRSf~D~sqYPIFPWv~~dy~s~~ldl~~~~~~RdLskPiga~~~~r~~~~~~~~~~~ 80 (270)
T PF02138_consen 1 TEKWQNGEISNFEYLMYLNILAGRSFNDLSQYPIFPWVISDYDSEELDLNDPSNYRDLSKPIGAQNEERLEKLKERYEEM 80 (270)
T ss_dssp HHHHHTTSS-HHHHHHHHHHHCT--TT-GGG---B---B---SSSS--TT-GGGB--TTS-HHHCSHHHHHHHHHHHHC-
T ss_pred CcchhcCCCcHHHHHHHHhHHhccCCCCCccCccccchhccCCccccccCCccccccccccccccCHHHHHHHHHHHHhh
Confidence 468999999999999999999999999999999999999 88765 68899999999999999987643 22333333
Q ss_pred -cCCCCccccHhhhhhhccccccccccchhHHHHhhhhc--cCCCCCchhhhhhhcc------CCCCccCccccCcchhh
Q 000399 445 -SSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV--YEPNEYPSTMQRLYQW------TPDECIPEFYCDPQIFY 515 (1566)
Q Consensus 445 -~~~~~~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~~--~~~~~~~~~~~~~~~~------~~~EliPEff~~p~~~~ 515 (1566)
..+.|+||+++|+++++|++||+|++|||.+++.++++ +.+++.+.++.+.+.+ +++|||||||++||||+
T Consensus 81 ~~~~~~~~y~s~ys~~~~v~~~L~R~ePft~l~~~lq~g~fD~~~r~F~SI~~~~~~~~~~~~d~~EliPEff~~Pe~f~ 160 (270)
T PF02138_consen 81 EEFEPPFHYGSHYSSPGTVLYYLVRLEPFTSLHIDLQSGKFDVPDRLFSSIEDTWNSVTENMNDVKELIPEFFYLPEFFK 160 (270)
T ss_dssp -SSS---SBSS-SS-HHHHHHHTTTSTTHHHHHHHCCTTS---CCCSS-BHHHHHHHHHH-TT----B-GGGGT-GGGGS
T ss_pred hccCCCccccCCCCCcchhhhhhcccChHHHHHHHHhccccCCchHHHHHHHHHHHHhhcCCccccccChhhhCCHHHhc
Confidence 23478999999999999999999999999999999876 3688999999888764 67999999999999999
Q ss_pred ccCC-------CCcccccCCCCCChHHHHHHhhhhhcccccceeeeeeEEeeeecccccccccccccccccCCCCCCC--
Q 000399 516 SQHP-------GMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSEPTKP-- 586 (1566)
Q Consensus 516 ~~~~-------~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDLifG~kq~g~~a~~a~Nvf~~~~~~~~~-- 586 (1566)
|.+. +|+||+||+||+||++||++||+||||+|||++||+||||||||||+|++|++|+|||+|.+++...
T Consensus 161 N~n~~~~g~~~~~~dV~LP~Wa~s~~~FV~~~R~aLES~~VS~~L~~WIDLIFG~kq~G~~A~~a~Nvf~p~~Y~~~~~~ 240 (270)
T PF02138_consen 161 NINNFDLGKGEDVDDVELPPWAKSPFEFVYKHRKALESDYVSQNLHHWIDLIFGYKQRGKEAVEAKNVFHPLTYEDSWIE 240 (270)
T ss_dssp -TT-SS--BS-B-SS-B--TT-SSHHHHHHHHHHHHCSHHHHTTHHHHHHHHTSCCCSCHHHHHTT--B-CCCSTTS---
T ss_pred ccccccccCCCccceeecCCccchHHHHHHHHHHHHhhhHHHhhhhHHHHHhhCcccccHHHHHHhhcccccCCCccccC
Confidence 9865 6899999999999999999999999999999999999999999999999999999999999987644
Q ss_pred ------------cccc--ccccccCCCCcc
Q 000399 587 ------------KSVG--RLQLFTQPHPVR 602 (1566)
Q Consensus 587 ------------~~~g--~~qlF~~pHp~r 602 (1566)
..+| |.|||++|||+|
T Consensus 241 ~~~~~~~~~~~~~~~Gq~P~QLF~~pHP~R 270 (270)
T PF02138_consen 241 DPMEREAIEAQLKNFGQVPIQLFTKPHPKR 270 (270)
T ss_dssp SHHHHHHHHHHHHHC--------SS-----
T ss_pred CHHHHHHHHHHHHhcCCChHHHhCCCCCCC
Confidence 4568 789999999998
No 3
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=1.1e-62 Score=561.10 Aligned_cols=615 Identities=20% Similarity=0.311 Sum_probs=450.4
Q ss_pred cccccccccCCchhhh--hHHHHHHHHHhhcChhhHhhhcHHHHHHHHhhcC--------------------------c-
Q 000399 861 YCLPLVATPLSDAEAE--CAYVLLKEFIKCLSPKAVRTMILPAIQKILQTTG--------------------------Y- 911 (1566)
Q Consensus 861 ~~L~~i~~~ls~~~~~--~~~~lf~~~~k~l~~~~t~~~L~~~i~~~~~~~~--------------------------~- 911 (1566)
..+|+|++.+.+++.. .+|.||++|++++|...||++|+..+.|+|+.++ +
T Consensus 8 lL~PHi~dl~~De~~~il~a~~lfdpIa~algvsqtqqhL~~~L~kl~dvesv~~Pddggsngstd~~~~l~Fsasssfk 87 (1034)
T KOG4190|consen 8 LLAPHIADLFDDEDHIILCAQLLFDPIAAALGVSQTQQHLFDFLFKLEDVESVDFPDDGGSNGSTDCDEFLFFSASSSFK 87 (1034)
T ss_pred HhhhhHHhhccChhHHHHHHHHhcchhHHHhcccHHHHHHHHHHhhhhccccccCCcccCcCCCcCCCceeEEeeccccc
Confidence 6789999999999888 9999999999999999999999999999997322 3
Q ss_pred ceeEeeechhhHHHHHHHhhhhHhHHhh-ccceee------------ecccc------------------------cc--
Q 000399 912 SHLKVSLLQDSFVREIWNRIGKQAYLEM-VHPLVI------------SNLYA------------------------AP-- 952 (1566)
Q Consensus 912 ~~~~~~l~~~~~~~~l~~~~g~~~~l~~-~~~~~~------------~~~~~------------------------~~-- 952 (1566)
|++.||||||+||++||||||++|||+| |.||++ +++|| +|
T Consensus 88 srksvklyhhsfllrliVRfgi~cfihhFiapliEa~Ggykepeqgngyhyhsggsrrtsknl~~aSe~elhk~dVaPe~ 167 (1034)
T KOG4190|consen 88 SRKSVKLYHHSFLLRLIVRFGIPCFIHHFIAPLIEAFGGYKEPEQGNGYHYHSGGSRRTSKNLKCASEHELHKLDVAPEF 167 (1034)
T ss_pred cccchhhhhhhhhhhheeeecCchhhhhhhhHHHHHhcCcCCcccCCccccccCcccccccccccchHhHhhhhccCCCc
Confidence 6889999999999999999999999999 999999 45554 12
Q ss_pred --------------C-C------Cccccc--------------------eeeee-----c--------------------
Q 000399 953 --------------H-K------SSASAA--------------------SVLLI-----G-------------------- 966 (1566)
Q Consensus 953 --------------~-~------~~~~~~--------------------~~~~~-----~-------------------- 966 (1566)
+ + .+++++ ....| |
T Consensus 168 k~dieeif~fEddhdkaS~qd~~~id~~dm~~~~~aa~aEEA~e~dg~pdklVIneliygarispdklSLkeS~~~~ai~ 247 (1034)
T KOG4190|consen 168 KKDIEEIFLFEDDHDKASIQDCDHIDQCDMAAFQQAAEAEEACEQDGHPDKLVINELIYGARISPDKLSLKESALEDAIN 247 (1034)
T ss_pred CcchhhheeeccccchhhhhhchhHHHHhhHHHHhhhhhHHHHhhcCCCcchhhhhhhhccccCccccccchhhCccccc
Confidence 0 0 111111 01111 0
Q ss_pred ------cccccCcc--eEE------------------eccc--------------------------------hh-----
Q 000399 967 ------SSEELGVP--ITV------------------HQTI--------------------------------LP----- 983 (1566)
Q Consensus 967 ------~~~~l~~~--~~~------------------~~~~--------------------------------~~----- 983 (1566)
-||+|.|| .|. |+.+ +|
T Consensus 248 pppigprsP~IEi~m~~TaggirrsfqlsaidcdigsrksVd~fDli~~a~eqi~p~aee~eaeasdslqasvi~~isEA 327 (1034)
T KOG4190|consen 248 PPPIGPRSPMIEIIMCETAGGIRRSFQLSAIDCDIGSRKSVDLFDLIFLAHEQICPGAEEFEAEASDSLQASVIPPISEA 327 (1034)
T ss_pred CCCCCCCCCeeEeeecccccccccccccccccccccccccchHHHHHHHhhhccCCchhhHHHHhhhhcccccCCcHHHH
Confidence 02222222 010 1000 00
Q ss_pred ------------------hhhhcCC---------------cccCCC----------------------------------
Q 000399 984 ------------------LIQCFGR---------------GICPDG---------------------------------- 996 (1566)
Q Consensus 984 ------------------l~~~~~~---------------~~~~~~---------------------------------- 996 (1566)
|+||+|| .+||.|
T Consensus 328 ~A~~N~~iSemaaESi~WLahRlGPVi~akFIsrNlLkilalCY~~~E~l~~E~ddggssfnsspdaanl~~Fnia~a~v 407 (1034)
T KOG4190|consen 328 CASMNCDISEMAAESIMWLAHRLGPVICAKFISRNLLKILALCYEAFEMLGLEQDDGGSSFNSSPDAANLAVFNIALAGV 407 (1034)
T ss_pred HhhhcCcHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHhCcccCCCCccccCCcchhhhhhhhhhhhcc
Confidence 6999999 366655
Q ss_pred ---------ceEEEEeccccchhHHHHHHHHHHHHHHhhhccccCCCCCCccccchhhHHHHHhhhcccchhccchhHHH
Q 000399 997 ---------IDVVVRIGGLLGETFIVRQMLPLLKHVARSSIDVSNTNKPEPVQSWSALSLIDCLMTLDGLVAFLPREVVV 1067 (1566)
Q Consensus 997 ---------~~~l~~i~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1566)
.+||+.|+++|||+||+.|||||+++||..|. +|++..+ |+|+|+.+++++++||+|+|..+|
T Consensus 408 vgD~saaRi~ecLm~IaalYgenFillQ~fP~~sdLI~lc~--KRisg~L------EgaiiSs~qil~~mipclsDa~iM 479 (1034)
T KOG4190|consen 408 VGDESAARIEECLMEIAALYGENFILLQFFPFCSDLIELCH--KRISGQL------EGAIISSFQILELMIPCLSDAQIM 479 (1034)
T ss_pred ccchhHHHHHHHHHHHHHHhcchhhhhhhhHHHHHHHHHHh--hhccccc------chhhhhHHHHHHHhccccchHHHH
Confidence 89999999999999999999999999999999 4898866 999999999999999999999999
Q ss_pred HHHhcccce-----eeeeehhhcccchhhhHHHHHH--------HHHHHHHhCCCcchhccc-hhhHHHHhhhhhchhcc
Q 000399 1068 KELIEDRSC-----LHVMVLMHTNLEITVLQVAAST--------LMAICQRIGPDLTALHVL-PHLKELFDELAFSQECS 1133 (1566)
Q Consensus 1068 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~r~g~~~~~~~~~-~~l~~~f~~~~f~~~~~ 1133 (1566)
|.||++.+ |...+|+++|+.||+|++..+. |++|++|||.||||+|.+ |.|.+|| +.|++.++
T Consensus 480 -ehlqhimldaillpilrllsstnlvmpsgylg~~~ia~Kf~dai~ais~kiGsdmTReh~cQPllnpFf--LiFnkaf~ 556 (1034)
T KOG4190|consen 480 -EHLQHIMLDAILLPILRLLSSTNLVMPSGYLGEEFIAQKFCDAIHAISQKIGSDMTREHACQPLLNPFF--LIFNKAFE 556 (1034)
T ss_pred -HHHHHHhhhhhhhhHHHhhccccccccchHHHHHHHHHHHHHHHHHHHHHhcchhhHHHhcCccccchh--hhhhhhcC
Confidence 88876654 5555699999999999988754 899999999999999999 9999999 99999877
Q ss_pred cCcccc---cCcccccCCCCC-Ccccccccc----ceeeeeccchhhhhhhHHHHhhhhHHHHHHHHHhhhcccceeecc
Q 000399 1134 DESGSL---GGSLKVPKPKVD-GESQIESRM----DLVLLLYPSFASLLGIEKLRQCCATWLLLEQFLLRYHNWKWEYTG 1205 (1566)
Q Consensus 1134 ~~~~~~---~~~~~~~~~~~~-~~~~~~~~~----~~~~~~y~~~~~~~g~~~~~~~~~~~~~~e~~l~~~~~~~~~~~~ 1205 (1566)
..+..- -.++....|..+ +.+.+|.|. +||...|..|++.+|...|.+.|.+-.++ +..||+.+++...
T Consensus 557 ip~tD~acdlanlsligga~qPera~eeL~dVfg~ela~~a~~~F~k~lGea~lkr~~~dl~Fl---i~~cheheqpngq 633 (1034)
T KOG4190|consen 557 IPETDEACDLANLSLIGGAKQPERAEEELFDVFGLELAEDAVDKFAKELGEAFLKRFCDDLAFL---IPFCHEHEQPNGQ 633 (1034)
T ss_pred CCCcchhhhhcchhhcccccCchhhHHHHHhcccHHHHHHHHHHHHHHhchHHHHhhccChhhe---ehhhccccCCCCC
Confidence 644221 123333445444 556666554 99999999999999999999999999999 9999998876422
Q ss_pred cccccccccccccCcccCCCCc-CccCccceeecccccccccCCCCcccccccccccccccccchHHHHHHhhccccCCC
Q 000399 1206 ESSRISEENISAKRPLLNKGST-SQCNPAKLLLNGVGWSIPQSQGSRSSKNLIPQRRVYDYHKSSVERQEATSNLMKCEP 1284 (1566)
Q Consensus 1206 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~s~~~~~~~~~~~~~i~~~~~~~le~~~~~~~~~~~~~~~H~~ 1284 (1566)
+.... +.+......+...... ..|++-......+|++.. ..+...+.+.....+.+++++..+|+.+.-.
T Consensus 634 ~k~qi-A~n~~sgqdvdsvdasce~faAnSfG~~i~GNRL~---~ar~n~elisdm~a~~Ldqmp~~~hlkGn~l----- 704 (1034)
T KOG4190|consen 634 PKAQI-AHNPPSGQDVDSVDASCEAFAANSFGGMISGNRLF---SARANSELISDMSAGGLDQMPFCDHLKGNLL----- 704 (1034)
T ss_pred CCccc-ccCCCCccccccccchhhhhhhhcccceeecceee---eeccCCccchhhhhcCccccccccccccchH-----
Confidence 22100 0110000000000101 111221111222234332 3455677778888999999999988877211
Q ss_pred ceeccCCCCCCCCCcccccccCccCCCCceEeeeeehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEec---
Q 000399 1285 WFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT--- 1361 (1566)
Q Consensus 1285 ~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~--- 1361 (1566)
.||+ .+.-+ ..+...-++++.-.+..+.||++.|+.++--.+++.++|+|+ |+||++|.+.
T Consensus 705 A~W~---------~ets~---~e~dt~~ln~~~irL~nf~GH~~~iRai~AidNENSFiSASk----DKTVKLWSik~Eg 768 (1034)
T KOG4190|consen 705 AVWC---------AETSA---AECDTDNLNFDHIRLCNFTGHQEKIRAIAAIDNENSFISASK----DKTVKLWSIKPEG 768 (1034)
T ss_pred HHHH---------hhhhH---hhcCCcccccceeeeecccCcHHHhHHHHhcccccceeeccC----CceEEEEEecccc
Confidence 1332 11000 011233356666688999999999999999999999999998 9999999985
Q ss_pred ----ccccccccccccccccceEEeecCCceeeccCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCC
Q 000399 1362 ----RINCVSGYYGHEEVVNDICVLSSSGRIASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGML 1437 (1566)
Q Consensus 1362 ----tg~~i~tl~gH~~~V~sVafsp~g~~LaSgDgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~ 1437 (1566)
|..|..+|+.|+.+|+++.|..+.+.++||||.|++||..-|+.+..+...... .+
T Consensus 769 D~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~giHlWDPFigr~Laq~~dapk~---~a----------------- 828 (1034)
T KOG4190|consen 769 DEIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDGGIHLWDPFIGRLLAQMEDAPKE---GA----------------- 828 (1034)
T ss_pred CccccceeeeEhhhccCcccceeeeeccceeeeccCcceeecccccchhHhhhcCccc---CC-----------------
Confidence 446899999999999999999999999999999999999999888754332110 00
Q ss_pred CCcccccccccccccchhHHHhhhhhccceEEEE-ecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCccc
Q 000399 1438 NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVG-IGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQ 1516 (1566)
Q Consensus 1438 ~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sg-s~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~ 1516 (1566)
...|.++.-- +..++++| +...||+++|.|.+.-+..|+..+.. +.+..++++++.
T Consensus 829 -----~~~ikcl~nv-----------~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~-~Pna~~R~iaVa------ 885 (1034)
T KOG4190|consen 829 -----GGNIKCLENV-----------DRHILIAGCSAESTVKLFDARSCEWTCELKVCNAP-GPNALTRAIAVA------ 885 (1034)
T ss_pred -----CceeEecccC-----------cchheeeeccchhhheeeecccccceeeEEeccCC-CCchheeEEEec------
Confidence 1112222110 13355555 88999999999999888888765332 345667777765
Q ss_pred CCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeee
Q 000399 1517 AGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRI 1562 (1566)
Q Consensus 1517 ~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vaf 1562 (1566)
+.|.|+|+|-++|.|.+.|.|+|+.+.+|+..+....+++.
T Consensus 886 -----~~GN~lAa~LSnGci~~LDaR~G~vINswrpmecdllqlaa 926 (1034)
T KOG4190|consen 886 -----DKGNKLAAALSNGCIAILDARNGKVINSWRPMECDLLQLAA 926 (1034)
T ss_pred -----cCcchhhHHhcCCcEEEEecCCCceeccCCcccchhhhhcC
Confidence 55689999999999999999999999999887776665553
No 4
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.5e-43 Score=397.69 Aligned_cols=180 Identities=19% Similarity=0.240 Sum_probs=149.2
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..+.|.+.+.||+|+||.|-+|..+ .+|+.||||++.+.+...... +..+.. ...+|++||++|+|||||+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~------~tgk~vAiKIi~krk~~~~s~-~~~~~~--~v~~EieILkkL~HP~IV~ 240 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEK------KTGKQVAIKIINKRKSTGCSR-AIAKTR--DVQNEIEILKKLSHPNIVR 240 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEc------ccCcEEEeeeeehhhcccccc-cccchh--hhHHHHHHHHhcCCCCEEE
Confidence 3567999999999999999998864 689999999999887655331 111100 1238999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch-hhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SWL 317 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~-~~v 317 (1566)
++++|+..+..||||||++| +|.+.+- .++.+.+..-+.+++|++.|+.|||++||+||||||+|||++.+.. ..+
T Consensus 241 ~~d~f~~~ds~YmVlE~v~GGeLfd~vv--~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~ll 318 (475)
T KOG0615|consen 241 IKDFFEVPDSSYMVLEYVEGGELFDKVV--ANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLL 318 (475)
T ss_pred EeeeeecCCceEEEEEEecCccHHHHHH--hccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEE
Confidence 99999999999999999997 9999987 4556788888999999999999999999999999999999988721 279
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~ 362 (1566)
||+|||+|+.... +.++.+.+|||.|.|||++.
T Consensus 319 KItDFGlAK~~g~------------~sfm~TlCGTpsYvAPEVl~ 351 (475)
T KOG0615|consen 319 KITDFGLAKVSGE------------GSFMKTLCGTPSYVAPEVLA 351 (475)
T ss_pred Eecccchhhcccc------------ceehhhhcCCccccChhhee
Confidence 9999999996442 22455667999999999874
No 5
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=3e-40 Score=438.07 Aligned_cols=249 Identities=16% Similarity=0.227 Sum_probs=192.6
Q ss_pred ccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee---------eehhhhhccCcceeeeecC-cceEEEeecc
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---------ILSSIRAHHGALRSVAVGQ-DECTVFTAGI 1347 (1566)
Q Consensus 1280 ~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~---------~l~tl~gH~~~V~slafsp-d~~~LaSgS~ 1347 (1566)
..|.+.|++ |+|+|.+ +++||.|++|++||.... ....+. +...|.+++|++ ++.+++||+.
T Consensus 480 ~~~~~~V~~i~fs~dg~~-----latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~ 553 (793)
T PLN00181 480 LNSSNLVCAIGFDRDGEF-----FATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNF 553 (793)
T ss_pred cCCCCcEEEEEECCCCCE-----EEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeC
Confidence 458899997 8999998 999999999999997531 112233 356899999987 5788999997
Q ss_pred CCCcccceeeEEecccccccccccccccccceEEee-cCCceeec--cCcEEEeecCCCcEEEEeecccc----------
Q 000399 1348 GPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLS-SSGRIASC--DGTLHVWNSQTGKLLSVFAEQSM---------- 1414 (1566)
Q Consensus 1348 ~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp-~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~---------- 1414 (1566)
|++|++||+.+++.+..+.+|.+.|++++|+| ++..++|| |++|++||++++.++.++..+..
T Consensus 554 ----Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~ 629 (793)
T PLN00181 554 ----EGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSES 629 (793)
T ss_pred ----CCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEEEEeCCC
Confidence 99999999999999999999999999999997 56778777 99999999999998877764321
Q ss_pred -cccccCCCCCcccccccCCCC--CCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCC------
Q 000399 1415 -DSLHGGSPSSSISKINTDQVG--MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG------ 1485 (1566)
Q Consensus 1415 -~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg------ 1485 (1566)
..+.+++.++.+.+|+..... ...+.+|...|.++.|.+ +..+++|+.|++|++||++.+
T Consensus 630 g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~-----------~~~lvs~s~D~~ikiWd~~~~~~~~~~ 698 (793)
T PLN00181 630 GRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVD-----------SSTLVSSSTDNTLKLWDLSMSISGINE 698 (793)
T ss_pred CCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEeC-----------CCEEEEEECCCEEEEEeCCCCccccCC
Confidence 123334445566777765443 234567888898888863 678999999999999999853
Q ss_pred ceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEe-------------ec
Q 000399 1486 QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW-------------RA 1552 (1566)
Q Consensus 1486 ~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l-------------~g 1552 (1566)
.+++++.+|. ..+.++++ ++++.+||+|+.|+.|++|+...+..+..+ ..
T Consensus 699 ~~l~~~~gh~------~~i~~v~~-----------s~~~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~ 761 (793)
T PLN00181 699 TPLHSFMGHT------NVKNFVGL-----------SVSDGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDD 761 (793)
T ss_pred cceEEEcCCC------CCeeEEEE-----------cCCCCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCC
Confidence 5677777763 33444444 466679999999999999998766544332 24
Q ss_pred cCceeeEeeeeccC
Q 000399 1553 HDGYVTKVRIISKR 1566 (1566)
Q Consensus 1553 H~~~V~~VafspdG 1566 (1566)
|...|.+|+|+|+|
T Consensus 762 ~~~~V~~v~ws~~~ 775 (793)
T PLN00181 762 ASQFISSVCWRGQS 775 (793)
T ss_pred CCcEEEEEEEcCCC
Confidence 56789999999985
No 6
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=1.2e-41 Score=373.33 Aligned_cols=152 Identities=21% Similarity=0.303 Sum_probs=133.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
+++|+.+.++|+|+||+||+|+++ ++|++||||++.....+.. .++. ++||+++|++++|||+|.|
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk------~TgqIVAIKkF~Esedd~~-VkKI-------AlREIrmLKqLkH~NLVnL 66 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNK------DTGQIVAIKKFVESEDDPV-VKKI-------ALREIRMLKQLKHENLVNL 66 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccC------CcccEEEEEeeccCCccHH-HHHH-------HHHHHHHHHhcccchHHHH
Confidence 357999999999999999999985 7999999999876543322 2222 3589999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++|.....++||+|||+.++.+-|...+++ +++..++.|++|++.|+.|||++++|||||||+||||+.++ .+|||
T Consensus 67 iEVFrrkrklhLVFE~~dhTvL~eLe~~p~G-~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~g--vvKLC 143 (396)
T KOG0593|consen 67 IEVFRRKRKLHLVFEYCDHTVLHELERYPNG-VPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNG--VVKLC 143 (396)
T ss_pred HHHHHhcceeEEEeeecchHHHHHHHhccCC-CCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCC--cEEec
Confidence 9999999999999999999888888766665 68889999999999999999999999999999999999999 89999
Q ss_pred CcCCCCccc
Q 000399 321 DKPLVGFNS 329 (1566)
Q Consensus 321 DFGlA~~~~ 329 (1566)
|||+||...
T Consensus 144 DFGFAR~L~ 152 (396)
T KOG0593|consen 144 DFGFARTLS 152 (396)
T ss_pred cchhhHhhc
Confidence 999999533
No 7
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.1e-41 Score=391.44 Aligned_cols=155 Identities=25% Similarity=0.322 Sum_probs=136.9
Q ss_pred hhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCc
Q 000399 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 237 (1566)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNI 237 (1566)
.+..+.|+.+++||+|+||.||+|++ ..+|++||+|++..+..... +.+.++|||.||++|+||||
T Consensus 113 ~r~~~~feki~kIGeGTyg~VYkAr~------~~tgkivALKKvr~d~~~~~--------~~~t~~REI~ILr~l~HpNI 178 (560)
T KOG0600|consen 113 PRRADSFEKIEKIGEGTYGQVYKARD------LETGKIVALKKVRFDNEKEG--------FPITAIREIKILRRLDHPNI 178 (560)
T ss_pred ccchHHHHHHHHhcCcchhheeEeee------cccCcEEEEEEeecccCCCc--------chHHHHHHHHHHHhcCCCcc
Confidence 34567899999999999999999997 47999999999987543322 22355699999999999999
Q ss_pred cccccccccc--CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 238 APVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 238 V~l~~~~~~~--~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
++|.+...+. ..+|||+|||+++|..++. ++.-.|++.+++.|++||+.||+|||++||+|||||.+||||+.+|
T Consensus 179 ikL~eivt~~~~~siYlVFeYMdhDL~GLl~-~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G-- 255 (560)
T KOG0600|consen 179 IKLEEIVTSKLSGSIYLVFEYMDHDLSGLLS-SPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNG-- 255 (560)
T ss_pred cceeeEEEecCCceEEEEEecccchhhhhhc-CCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCC--
Confidence 9999998776 6999999999999999997 3555699999999999999999999999999999999999999999
Q ss_pred hhhhcCcCCCCccc
Q 000399 316 WLYICDKPLVGFNS 329 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~ 329 (1566)
.+||+|||||++..
T Consensus 256 ~LKiaDFGLAr~y~ 269 (560)
T KOG0600|consen 256 VLKIADFGLARFYT 269 (560)
T ss_pred CEEeccccceeecc
Confidence 79999999999644
No 8
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=3.4e-41 Score=365.17 Aligned_cols=149 Identities=23% Similarity=0.302 Sum_probs=134.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|..++.||+|+||.||+|++ .++|+.||||+++.++.... +..+++|||..|+.++||||+.++
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d------~~t~~~VAIKKIkl~~~kdG--------i~~talREIK~Lqel~h~nIi~Li 67 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARD------TETGKRVAIKKIKLGNAKDG--------INRTALREIKLLQELKHPNIIELI 67 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEe------cCCCcEEEEEEeeccccccC--------ccHHHHHHHHHHHHccCcchhhhh
Confidence 4799999999999999999997 47899999999987643322 123567999999999999999999
Q ss_pred ccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++|...+.+.||+||++.+|+.+|+. +...++..+++.|+.|+++|++|||++.|+||||||.|+||+++| .+||+|
T Consensus 68 D~F~~~~~l~lVfEfm~tdLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g--~lKiAD 144 (318)
T KOG0659|consen 68 DVFPHKSNLSLVFEFMPTDLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDG--QLKIAD 144 (318)
T ss_pred hhccCCCceEEEEEeccccHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCC--cEEeec
Confidence 99999999999999999999999984 566789999999999999999999999999999999999999999 899999
Q ss_pred cCCCCc
Q 000399 322 KPLVGF 327 (1566)
Q Consensus 322 FGlA~~ 327 (1566)
||+||.
T Consensus 145 FGLAr~ 150 (318)
T KOG0659|consen 145 FGLARF 150 (318)
T ss_pred ccchhc
Confidence 999995
No 9
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=5e-41 Score=372.93 Aligned_cols=158 Identities=23% Similarity=0.200 Sum_probs=140.2
Q ss_pred cchhhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccC
Q 000399 155 FSCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH 234 (1566)
Q Consensus 155 ~~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~H 234 (1566)
+..++.++.|+.+..|++|+||.||+|+++ .++.+||+|.++.++.. . =++++.+|||.+|.+++|
T Consensus 69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk------~t~eIVALKr~kmekek-~-------GFPItsLREIniLl~~~H 134 (419)
T KOG0663|consen 69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDK------KTDEIVALKRLKMEKEK-E-------GFPITSLREINILLKARH 134 (419)
T ss_pred ccCcccHHHHHHHhhcccCcceeEEEeccC------CcceeEEeeeccccccc-C-------CCcchhHHHHHHHHhcCC
Confidence 556777899999999999999999999985 68999999999875421 1 146778999999999999
Q ss_pred CCccccccccccc--CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 235 PNVAPVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 235 pNIV~l~~~~~~~--~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
||||.+-.+.... +.+|||||||+.+|..++...+ .+|...+++.++.|+++|++|||++.|+||||||+|+|++..
T Consensus 135 ~NIV~vkEVVvG~~~d~iy~VMe~~EhDLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~ 213 (419)
T KOG0663|consen 135 PNIVEVKEVVVGSNMDKIYIVMEYVEHDLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHK 213 (419)
T ss_pred CCeeeeEEEEeccccceeeeeHHHHHhhHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccC
Confidence 9999999988655 5899999999999999998654 578999999999999999999999999999999999999999
Q ss_pred chhhhhhcCcCCCCccc
Q 000399 313 CWSWLYICDKPLVGFNS 329 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~~~ 329 (1566)
| .+||+|||+||...
T Consensus 214 G--~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 214 G--ILKIADFGLAREYG 228 (419)
T ss_pred C--cEEecccchhhhhc
Confidence 9 79999999999533
No 10
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-41 Score=386.33 Aligned_cols=154 Identities=22% Similarity=0.258 Sum_probs=137.7
Q ss_pred hhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCC
Q 000399 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPN 236 (1566)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpN 236 (1566)
....++|.++++||.|+||.||+|+.+ +++..||||.+++.-.. ..+..+ +||+..|++|+ |||
T Consensus 6 ~~~m~RY~~i~klGDGTfGsV~la~~~------~~~~~VAIK~MK~Kf~s---~ee~~n------LREvksL~kln~hpn 70 (538)
T KOG0661|consen 6 VIFMDRYTVIRKLGDGTFGSVYLAKSK------ETGELVAIKKMKKKFYS---WEECMN------LREVKSLRKLNPHPN 70 (538)
T ss_pred hhHHHHHHHHHHhcCCcceeEEEeeec------CCCceeeHHHHHhhhcc---HHHHHH------HHHHHHHHhcCCCCc
Confidence 345789999999999999999999864 68888999999876544 334443 58999999998 999
Q ss_pred cccccccccccC-ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 237 VAPVLGLLKTSG-LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 237 IV~l~~~~~~~~-~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
||++.+++.+.+ .+|+|||||+.+|+++++.+ +..|++..++.|++||++||+|+|.+|+.|||+||||||+....
T Consensus 71 iikL~Evi~d~~~~L~fVfE~Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~-- 147 (538)
T KOG0661|consen 71 IIKLKEVIRDNDRILYFVFEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGND-- 147 (538)
T ss_pred chhhHHHhhccCceEeeeHHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccc--
Confidence 999999999988 99999999999999999975 77899999999999999999999999999999999999999766
Q ss_pred hhhhcCcCCCCccc
Q 000399 316 WLYICDKPLVGFNS 329 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~ 329 (1566)
.+||+|||+||...
T Consensus 148 ~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 148 VIKIADFGLAREVR 161 (538)
T ss_pred eeEecccccccccc
Confidence 69999999999654
No 11
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.5e-40 Score=393.38 Aligned_cols=172 Identities=18% Similarity=0.232 Sum_probs=149.4
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|+..+.||+|+|+.||++++ ..+|..||+|++.+....+...++-+. +||+|.+.|+|||||+++
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~------~~tge~~A~KvVpk~~l~k~~~reKv~-------~EIeIHr~L~HpnIV~f~ 84 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARD------LDTGEVVAVKVVPKKLLKKPKQREKVL-------NEIEIHRSLKHPNIVQFY 84 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEE------cCCCcEEEEEEeehHHhcCcchHHHHH-------HHHHHHHhcCCCcEEeee
Confidence 5799999999999999999886 478999999999987666665555554 799999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++|++++++|||+|+|.. +|..+++ .++.++|.+++++++||+.||.|||+++|||||||..||+|+++. +|||+
T Consensus 85 ~~FEDs~nVYivLELC~~~sL~el~K--rrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~--~VKIg 160 (592)
T KOG0575|consen 85 HFFEDSNNVYIVLELCHRGSLMELLK--RRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENM--NVKIG 160 (592)
T ss_pred eEeecCCceEEEEEecCCccHHHHHH--hcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcC--cEEec
Confidence 999999999999999996 9999998 567899999999999999999999999999999999999999998 69999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 361 (1566)
|||||.......+ ..+ +.+|||-|.|||++
T Consensus 161 DFGLAt~le~~~E-----rk~------TlCGTPNYIAPEVl 190 (592)
T KOG0575|consen 161 DFGLATQLEYDGE-----RKK------TLCGTPNYIAPEVL 190 (592)
T ss_pred ccceeeeecCccc-----ccc------eecCCCcccChhHh
Confidence 9999987653111 111 22488888888775
No 12
>KOG1787 consensus Kinase A-anchor protein Neurobeachin and related BEACH and WD40 repeat proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-39 Score=417.59 Aligned_cols=240 Identities=34% Similarity=0.501 Sum_probs=201.7
Q ss_pred hccccccccccCCchhhhHHHhhcccccCCccceeecceeE-eeccC-CCCCCCcccccccccccccccCCcc-eeeeee
Q 000399 368 SQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGDEQ-LDFTYS 444 (1566)
Q Consensus 368 ~~~d~Ws~G~isnfeyL~~ln~~agrs~~dl~q~pv~pwv~-d~~~~-~~~~~~~~~rdLskp~~~l~~~~~~-~~~~~~ 444 (1566)
..+..|..++++||+|+|.+|..+||++||++|||||||++ ||.+. .|.+.+.+||||+||+|++|..... +..+|.
T Consensus 470 ~~t~~w~~~~~s~~~~l~~l~t~agrsyndl~qypvfpwvl~dy~s~~ld~s~~~~frdlsKpigaln~~~~~~f~dry~ 549 (1126)
T KOG1787|consen 470 GITQEWQAREISNFEVLMQLNTSAGRSYNDLTQYPVFPWVLRDYSSETLDLSKLSTFRDLSKPIGALNPKRAYLFRDRYE 549 (1126)
T ss_pred CccHHHHhhccccHHHHHHHHhccCcccCccccCCCCCeeeecccchhhhcccchhHHhhcCcccCCCcccchhHhhhhh
Confidence 46789999999999999999999999999999999999999 77664 5889999999999999999875433 445666
Q ss_pred cCC----CCccccHhhhhhhccccccccccchhHHHHhhhhc--cCCCCCchhhhhhh------ccCCCCccCccccCcc
Q 000399 445 SSE----IPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV--YEPNEYPSTMQRLY------QWTPDECIPEFYCDPQ 512 (1566)
Q Consensus 445 ~~~----~~~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~~--~~~~~~~~~~~~~~------~~~~~EliPEff~~p~ 512 (1566)
+.+ ..+||++||++...+.+|++|.+||++++++.+.+ +.+.+-+++..+-+ ..|++|+||||||.||
T Consensus 550 s~~D~~i~~~~~~thys~~~~~l~~l~rvepf~S~~~~l~~gkfd~~dr~~~sv~~~~r~~l~d~sdvkelipeffy~p~ 629 (1126)
T KOG1787|consen 550 SFEDQAIPSFHYGTHYSSAANVLAYLLRVEPFTSLHLQLQDGKFDHADRAFSSVASSWRRCLRDTSDVKELIPEFFYFPE 629 (1126)
T ss_pred ccccccccccccccccccccceeeeeeecCccccccccccccccccchhhHHHHHHHHhhhccchhhHHHhhhHHHHHHH
Confidence 543 34799999999999999999999999999887753 33333333332222 2478999999999999
Q ss_pred hhhccC----------CCCcccccCCCCCChHHHHHHhhhhhcccccceeeeeeEEeeeecccccccccccccccccCCC
Q 000399 513 IFYSQH----------PGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSSE 582 (1566)
Q Consensus 513 ~~~~~~----------~~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDLifG~kq~g~~a~~a~Nvf~~~~~ 582 (1566)
+|.|.+ ++|.||.|||||++|++|+..||+||||+|||.++|.||||||||||+|.+|+.|.|||+..+|
T Consensus 630 ll~~~~~~~lg~~~dg~~vi~v~lppwa~~pe~f~~~nr~aLes~fvs~~l~~widlifg~Kq~g~ea~~a~nvf~~~ty 709 (1126)
T KOG1787|consen 630 LLVNSNLYNLGVRVDGEPVIDVVLPPWAKSPEDFETRNREALESEFVSCQLHQWIDLIFGYKQRGPEAVRAMNVFYYLTY 709 (1126)
T ss_pred HHhccccccceeecCCccceeeecccccCCHHHHHHHHHHHhhccccccccchhHHhhhhHhhcCHHHHHhhhhhccCCc
Confidence 999763 4689999999999999999999999999999999999999999999999999999999998875
Q ss_pred CCC-------------------Ccccc--ccccccCCCCccccccc
Q 000399 583 PTK-------------------PKSVG--RLQLFTQPHPVRQTATW 607 (1566)
Q Consensus 583 ~~~-------------------~~~~g--~~qlF~~pHp~r~~~~~ 607 (1566)
... ...+| |.|+|.++||+|.....
T Consensus 710 eG~v~~~~~~d~~~~~eai~~~i~~f~~~~~~~~~e~~~~~~~~~~ 755 (1126)
T KOG1787|consen 710 EGAVDLDSITDQVLRTEAIEAQIASFGQTPSQLLQEQHPPRASESK 755 (1126)
T ss_pred cccccccccCChhHHHHHHHHHHhhccccchhhhhhccCCcchhcc
Confidence 310 11345 79999999999988766
No 13
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-39 Score=369.61 Aligned_cols=152 Identities=23% Similarity=0.373 Sum_probs=130.6
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
....|..++.||+|+||.|..+.++ .+|..||||++..........+ +++||+.+|+.++|+||+.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~------~t~~~VAIKKi~~~F~~~~~ak--------RtlRElklLr~~~HeNIi~ 85 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDK------RTGEKVAIKKILNPFENQIDAK--------RTLRELKLLRHLRHENIIG 85 (359)
T ss_pred ccceecccccccCcceeeEEEEEEc------CCCCEeehhhhhhhhhchHHHH--------HHHHHHHHHHHhcCCCcce
Confidence 3456777899999999999998874 6789999999875433333333 4458999999999999999
Q ss_pred cccccccc-----CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch
Q 000399 240 VLGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1566)
Q Consensus 240 l~~~~~~~-----~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~ 314 (1566)
+++++..+ ..+|+|+|+|+.+|..+|+ .+..+++.+++++++||++||+|+|+.+|+||||||+|+|++.++
T Consensus 86 l~di~~p~~~~~f~DvYiV~elMetDL~~iik--~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c- 162 (359)
T KOG0660|consen 86 LLDIFRPPSRDKFNDVYLVFELMETDLHQIIK--SQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADC- 162 (359)
T ss_pred EEeecccccccccceeEEehhHHhhHHHHHHH--cCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCC-
Confidence 99999762 4899999999999999998 344489999999999999999999999999999999999999999
Q ss_pred hhhhhcCcCCCCccc
Q 000399 315 SWLYICDKPLVGFNS 329 (1566)
Q Consensus 315 ~~vKL~DFGlA~~~~ 329 (1566)
.+||||||+||...
T Consensus 163 -~lKI~DFGLAR~~~ 176 (359)
T KOG0660|consen 163 -DLKICDFGLARYLD 176 (359)
T ss_pred -CEEeccccceeecc
Confidence 79999999999543
No 14
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=9.1e-39 Score=375.56 Aligned_cols=149 Identities=16% Similarity=0.240 Sum_probs=138.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||+||+|+.+ .+|.++|+|++++......+..+.++ .|-.+|...++|+||+|
T Consensus 140 ~~DFe~Lk~IgkGAfGeVrLarKk------~Tg~iyAmK~LkKS~M~~~~Qv~hV~-------aERdiL~~~ds~~vVKL 206 (550)
T KOG0605|consen 140 LDDFELLKVIGKGAFGEVRLARKK------DTGEIYAMKILKKSEMLKKNQVEHVR-------AERDILAEVDSPWVVKL 206 (550)
T ss_pred cccchhheeeccccceeEEEEEEc------cCCcEEeeecccHHHHHhhhhHHHHH-------HHHHHhhhcCCCcEEEE
Confidence 679999999999999999999853 68999999999998877766666665 79999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
|..|++.+++||||||++| ++..+|. +.+.+++.++++|+.+++.|++.+|..|+|||||||+|+|||..| ++||
T Consensus 207 yYsFQD~~~LYLiMEylPGGD~mTLL~--~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~G--HiKL 282 (550)
T KOG0605|consen 207 YYSFQDKEYLYLIMEYLPGGDMMTLLM--RKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKG--HIKL 282 (550)
T ss_pred EEEecCCCeeEEEEEecCCccHHHHHH--hcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCC--CEee
Confidence 9999999999999999997 9999998 567799999999999999999999999999999999999999999 8999
Q ss_pred cCcCCCC
Q 000399 320 CDKPLVG 326 (1566)
Q Consensus 320 ~DFGlA~ 326 (1566)
+||||++
T Consensus 283 SDFGLs~ 289 (550)
T KOG0605|consen 283 SDFGLST 289 (550)
T ss_pred ccccccc
Confidence 9999995
No 15
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-39 Score=363.47 Aligned_cols=170 Identities=18% Similarity=0.226 Sum_probs=145.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+.+.++.||+|+.|+||+++|+ .+++.+|+|++..+ ......++.+ ||+++++.++|||||.+
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk------~t~~i~AlK~I~~~-~~~~~~~Qi~--------rEl~il~~~~spyIV~~ 142 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHK------PTGKIYALKVILLN-IDPALQKQIL--------RELEILRSCQSPYIVGF 142 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEc------CCCeEEEEEeeccc-CCHHHHHHHH--------HHHHHHhhCCCCCeeeE
Confidence 457889999999999999999985 68999999999442 3334444455 69999999999999999
Q ss_pred cccccccCc-eeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhhh
Q 000399 241 LGLLKTSGL-ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 241 ~~~~~~~~~-l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
||+|..++. ++|+||||++ +|+++++. .+.++|..+..++.||++||.|||+ ++||||||||+|||++..| .|
T Consensus 143 ygaF~~~~~~isI~mEYMDgGSLd~~~k~--~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskG--eV 218 (364)
T KOG0581|consen 143 YGAFYSNGEEISICMEYMDGGSLDDILKR--VGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKG--EV 218 (364)
T ss_pred eEEEEeCCceEEeehhhcCCCCHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCC--CE
Confidence 999999995 9999999997 99999984 4668999999999999999999996 9999999999999999999 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~ 362 (1566)
||||||.++..... .+.+++||..|||||.+.
T Consensus 219 KicDFGVS~~lvnS-------------~a~tfvGT~~YMsPERi~ 250 (364)
T KOG0581|consen 219 KICDFGVSGILVNS-------------IANTFVGTSAYMSPERIS 250 (364)
T ss_pred EeccccccHHhhhh-------------hcccccccccccChhhhc
Confidence 99999999864420 234567888899887754
No 16
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.2e-37 Score=363.12 Aligned_cols=171 Identities=26% Similarity=0.309 Sum_probs=147.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|.+.+.||+|+||.||||+++ .+...||+|.+.+......+.+... +|++|++.++|||||.++
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK------~t~~~vAik~i~K~gr~~k~l~~l~--------~ev~i~r~lkHpniv~m~ 67 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRK------YTIQVVAIKFIDKSGRNEKELKNLR--------QEVRILRSLKHPNIVEML 67 (808)
T ss_pred cchhHHHHhcCCccceeeecccc------cceeEEEEEEehhcCCchHHHHHHH--------HHHHHHHhcCCcchhhHH
Confidence 57999999999999999999975 4889999999998766665555555 599999999999999999
Q ss_pred ccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++|++..++|+|+|||.|+|+.+|. ..+.++|..++.+++|++.||.|||+.+|+|||+||.|||++.++ ++|+||
T Consensus 68 esfEt~~~~~vVte~a~g~L~~il~--~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~--~~Klcd 143 (808)
T KOG0597|consen 68 ESFETSAHLWVVTEYAVGDLFTILE--QDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGG--TLKLCD 143 (808)
T ss_pred HhhcccceEEEEehhhhhhHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCC--ceeech
Confidence 9999999999999999999999998 456689999999999999999999999999999999999999999 899999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 361 (1566)
||+||..... ....+...|||.|||||+.
T Consensus 144 Fg~Ar~m~~~-----------t~vltsikGtPlYmAPElv 172 (808)
T KOG0597|consen 144 FGLARAMSTN-----------TSVLTSIKGTPLYMAPELV 172 (808)
T ss_pred hhhhhhcccC-----------ceeeeeccCcccccCHHHH
Confidence 9999964420 0112334577777777654
No 17
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-37 Score=328.48 Aligned_cols=155 Identities=19% Similarity=0.205 Sum_probs=133.9
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
...+.|++-+.||+|.|+.|+++.+. .+|+.+|+|+++..+....+.++.- ||++|.+.|+|||||
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~------~tg~~fa~kiin~~k~~~~~~e~l~--------rEarIC~~LqHP~Iv 73 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHK------TTGLEFAAKIINTKKLSARDFQKLE--------REARICRKLQHPNIV 73 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhc------cchHHHHHHHhhhhhhccccHHHHH--------HHHHHHHhcCCCcEe
Confidence 34578999999999999999999974 7899999999998777766554444 699999999999999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch-hh
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SW 316 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~-~~ 316 (1566)
+|++.+...+..|||+|++.| +|..-|- .+..++|..+..+++||+.||.|||.+||||||+||+|+|+..... .-
T Consensus 74 rL~~ti~~~~~~ylvFe~m~G~dl~~eIV--~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~ 151 (355)
T KOG0033|consen 74 RLHDSIQEESFHYLVFDLVTGGELFEDIV--AREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAA 151 (355)
T ss_pred ehhhhhcccceeEEEEecccchHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCc
Confidence 999999999999999999998 7765554 2356799999999999999999999999999999999999976543 36
Q ss_pred hhhcCcCCCCccc
Q 000399 317 LYICDKPLVGFNS 329 (1566)
Q Consensus 317 vKL~DFGlA~~~~ 329 (1566)
+||+|||+|....
T Consensus 152 vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 152 VKLADFGLAIEVN 164 (355)
T ss_pred eeecccceEEEeC
Confidence 9999999998544
No 18
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1e-36 Score=363.01 Aligned_cols=151 Identities=18% Similarity=0.208 Sum_probs=133.8
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
.++-|++++.||+|+.|.|.+|++. ++|+..|||++.+.....+....-+ -||+-+|+.+.||||++
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~------~TGqlaaiKii~k~~~~s~s~~~~I-------erEIviMkLi~HpnVl~ 76 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHA------ETGQLAAIKIIPKRSELSSSQPAGI-------EREIVIMKLIEHPNVLR 76 (786)
T ss_pred cccceeccccccCCCCceehhhhcc------cccceeEEEeeccccccccccccch-------hhhhHHHHHhcCCCeee
Confidence 3567999999999999999999984 7999999999988632222222222 28999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+|++++++.++|+|+||++| .|++++. .++++++.++..+++||+.|+.|||..+|+||||||+|+||+..+ .+|
T Consensus 77 LydVwe~~~~lylvlEyv~gGELFdylv--~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~--nIK 152 (786)
T KOG0588|consen 77 LYDVWENKQHLYLVLEYVPGGELFDYLV--RKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKN--NIK 152 (786)
T ss_pred eeeeeccCceEEEEEEecCCchhHHHHH--hhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhccc--CEe
Confidence 99999999999999999996 9999998 567899999999999999999999999999999999999999999 599
Q ss_pred hcCcCCCCc
Q 000399 319 ICDKPLVGF 327 (1566)
Q Consensus 319 L~DFGlA~~ 327 (1566)
|+|||+|..
T Consensus 153 IADFGMAsL 161 (786)
T KOG0588|consen 153 IADFGMASL 161 (786)
T ss_pred eeccceeec
Confidence 999999974
No 19
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-37 Score=352.78 Aligned_cols=203 Identities=22% Similarity=0.275 Sum_probs=176.7
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..++|...+.||+|+||+||+|+++ .++..||||.+.+.+......+... .|+.+|+.++|||||+
T Consensus 8 ~~~~y~~~~~iG~GsfavVykg~h~------~~~~~VAIK~i~~~~l~~k~~e~L~--------~Ei~iLkel~H~nIV~ 73 (429)
T KOG0595|consen 8 VVGDYELSREIGSGSFAVVYKGRHK------KSGTEVAIKCIAKKKLNKKLVELLL--------SEIKILKELKHPNIVR 73 (429)
T ss_pred ccccceehhhccCcceEEEEEeEec------cCCceEEeeeehhhccCHHHHHHHH--------HHHHHHHhcCCcceee
Confidence 4678999999999999999999985 5779999999988765443333233 6999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc-ch---
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS-CW--- 314 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~-~~--- 314 (1566)
|++++++++.+|||||||.| +|.++|+ ..+.+++..++.++.||+.||++||+++||||||||+||||+.. +.
T Consensus 74 l~d~~~~~~~i~lVMEyC~gGDLs~yi~--~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~ 151 (429)
T KOG0595|consen 74 LLDCIEDDDFIYLVMEYCNGGDLSDYIR--RRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTS 151 (429)
T ss_pred EEEEEecCCeEEEEEEeCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCC
Confidence 99999999999999999996 9999998 45578999999999999999999999999999999999999986 32
Q ss_pred hhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 315 ~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
..+||+|||+||.... +.+..+.+|+|.|||||++....|+.+.|.|+.|.| .+..+.|++
T Consensus 152 ~~LKIADFGfAR~L~~------------~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~I-------lyq~l~g~~ 212 (429)
T KOG0595|consen 152 PVLKIADFGFARFLQP------------GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTI-------LYQCLTGKP 212 (429)
T ss_pred ceEEecccchhhhCCc------------hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHH-------HHHHHhCCC
Confidence 3689999999997662 123345569999999999999999999999999998 888888988
Q ss_pred cCC
Q 000399 395 WGD 397 (1566)
Q Consensus 395 ~~d 397 (1566)
+.+
T Consensus 213 Pf~ 215 (429)
T KOG0595|consen 213 PFD 215 (429)
T ss_pred Ccc
Confidence 755
No 20
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=345.14 Aligned_cols=146 Identities=25% Similarity=0.354 Sum_probs=125.6
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
.|+-.+.+|.|+||.||+|.. .+++..+|||.+..++... + +|+++|+.++|||||+|..
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~------~e~~~~vAIKKv~~d~r~k-------n-------rEl~im~~l~HpNIV~L~~ 84 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKL------RETEEEVAIKKVLQDKRYK-------N-------RELQIMRKLDHPNIVRLLY 84 (364)
T ss_pred EEEeeEEEeecccceEEEEEE------cCCCceeEEEEecCCCCcC-------c-------HHHHHHHhcCCcCeeeEEE
Confidence 688899999999999999885 3568999999987654432 3 7999999999999999998
Q ss_pred cccccC-----ceeeeccCCccchhhhhcc--CcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 243 LLKTSG-----LITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 243 ~~~~~~-----~l~LV~E~~~gsL~~~l~~--~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
+|.... .+.+||||+|.+|.++++. ..+..++.-+++.|++||++||.|||+.||+||||||+|||+|.+..
T Consensus 85 ~f~~~~~~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg- 163 (364)
T KOG0658|consen 85 FFSSSTESDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTG- 163 (364)
T ss_pred EEEecCCCchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCC-
Confidence 885432 6789999999999999984 22455788899999999999999999999999999999999999853
Q ss_pred hhhhcCcCCCCccc
Q 000399 316 WLYICDKPLVGFNS 329 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~ 329 (1566)
.+||||||.|+...
T Consensus 164 ~LKicDFGSAK~L~ 177 (364)
T KOG0658|consen 164 VLKICDFGSAKVLV 177 (364)
T ss_pred eEEeccCCcceeec
Confidence 89999999998543
No 21
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.7e-36 Score=343.67 Aligned_cols=151 Identities=23% Similarity=0.261 Sum_probs=132.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCC-ccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN-VAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpN-IV~ 239 (1566)
...|+.+++||+|+||+||+|+++ .+|..||+|++...... ++ ++.+++||+.+|+.++|+| ||+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~------~~g~~VALKkirl~~~~-EG-------~P~taiREisllk~L~~~~~iv~ 75 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSK------RTGKFVALKKIRLEFEE-EG-------VPSTAIREISLLKRLSHANHIVR 75 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEe------cCCCEEEEEEEeccccc-cC-------CCchhhHHHHHHHHhCCCcceEE
Confidence 567999999999999999999974 57899999999865432 11 2446689999999999999 999
Q ss_pred ccccccccC------ceeeeccCCccchhhhhccCcc--cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc
Q 000399 240 VLGLLKTSG------LITSVIPKTPYTLENILQFSPN--ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1566)
Q Consensus 240 l~~~~~~~~------~l~LV~E~~~gsL~~~l~~~~~--~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~ 311 (1566)
|++++.+.+ .+++|+||++.+|..++...+. ..++...++.+++||+.||+|||+++|+||||||+||||++
T Consensus 76 L~dv~~~~~~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~ 155 (323)
T KOG0594|consen 76 LHDVIHTSNNHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISS 155 (323)
T ss_pred EEeeeeecccccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECC
Confidence 999998877 8999999999999999986543 34677889999999999999999999999999999999999
Q ss_pred cchhhhhhcCcCCCCc
Q 000399 312 SCWSWLYICDKPLVGF 327 (1566)
Q Consensus 312 ~~~~~vKL~DFGlA~~ 327 (1566)
+| .+||+|||+|+.
T Consensus 156 ~G--~lKlaDFGlAra 169 (323)
T KOG0594|consen 156 SG--VLKLADFGLARA 169 (323)
T ss_pred CC--cEeeeccchHHH
Confidence 99 799999999983
No 22
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-36 Score=362.00 Aligned_cols=173 Identities=16% Similarity=0.135 Sum_probs=144.7
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV 238 (1566)
..++|+++++||+|+||+|+++..+ .++..+|||+++|+.+...+..+-+. .|.+|+... +||.++
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k------~~~e~yAIK~LKK~~Il~~d~Ve~~~-------~EkrI~~la~~HPFL~ 432 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELK------GTNEYYAIKVLKKGDILQRDEVESLM-------CEKRIFELANRHPFLV 432 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEc------CCCcEEEEEEeeccceeccccHHHHH-------HHHHHHHHhccCCeEe
Confidence 4568999999999999999998864 57889999999998877666555544 688887777 499999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
.|+..|++++++|+||||+.| ++..+++ ...+++..+++|+..|+.||.|||++||||||||.+|||||.+| ++
T Consensus 433 ~L~~~fQT~~~l~fvmey~~Ggdm~~~~~---~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eG--h~ 507 (694)
T KOG0694|consen 433 NLFSCFQTKEHLFFVMEYVAGGDLMHHIH---TDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEG--HV 507 (694)
T ss_pred ecccccccCCeEEEEEEecCCCcEEEEEe---cccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccC--cE
Confidence 999999999999999999997 7444443 45699999999999999999999999999999999999999999 89
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 361 (1566)
||+|||+++....... ...+++|||.|||||++
T Consensus 508 kiADFGlcKe~m~~g~-----------~TsTfCGTpey~aPEil 540 (694)
T KOG0694|consen 508 KIADFGLCKEGMGQGD-----------RTSTFCGTPEFLAPEVL 540 (694)
T ss_pred EecccccccccCCCCC-----------ccccccCChhhcChhhh
Confidence 9999999996542111 12344588888887764
No 23
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-35 Score=354.95 Aligned_cols=174 Identities=22% Similarity=0.227 Sum_probs=145.0
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc--cccchhhhcCCCCCCCCCCCCccc-CCCc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ--ESKNFLRLIGVPSFDESSVPGCLR-HPNV 237 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~--~~~~~l~~~g~~~~rEi~iL~~l~-HpNI 237 (1566)
.++|++.+.||+|+||.|+.|++. .++..||+|++.+...... ...+.+. ||+.+++.++ ||||
T Consensus 16 ~g~y~~~~~lG~GsfgkV~~a~~~------~t~~~vAiKii~~~~~~~~~~~~~~~i~-------rEi~~~~~~~~HpnI 82 (370)
T KOG0583|consen 16 IGKYELGRTLGSGSFGKVKLAKHR------LTGEKVAIKIIDRKKVSSKSQKLDELIK-------REISILRRLRSHPNI 82 (370)
T ss_pred cCceeeeeeecCCCCeeEEEeeec------cCCCeEEEEEechhcccccccccchhhH-------HHHHHHHHhccCCCE
Confidence 568999999999999999999874 5679999997776533212 2233333 7999999999 9999
Q ss_pred ccccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc-chh
Q 000399 238 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS-CWS 315 (1566)
Q Consensus 238 V~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~-~~~ 315 (1566)
+++++++.+...+|+||||+.| +|.+++.. .+.+.|..++.+++|+++|++|||++||+||||||+|||++.+ +
T Consensus 83 ~~l~ev~~t~~~~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~-- 158 (370)
T KOG0583|consen 83 IRLLEVFATPTKIYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEG-- 158 (370)
T ss_pred eEEEEEEecCCeEEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCC--
Confidence 9999999999999999999997 99999984 6678999999999999999999999999999999999999999 7
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~ 362 (1566)
.+||+|||++..... ......+++||+.|+|||++.
T Consensus 159 ~~Kl~DFG~s~~~~~-----------~~~~l~t~cGsp~Y~aPEvl~ 194 (370)
T KOG0583|consen 159 NLKLSDFGLSAISPG-----------EDGLLKTFCGSPAYAAPEVLS 194 (370)
T ss_pred CEEEeccccccccCC-----------CCCcccCCCCCcccCCHHHhC
Confidence 699999999986520 001223445888888888764
No 24
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=348.27 Aligned_cols=253 Identities=18% Similarity=0.182 Sum_probs=213.7
Q ss_pred hhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCC
Q 000399 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPN 236 (1566)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpN 236 (1566)
.+...+|.+++.||+|+|++|++|+++ .+++.||||++.+.-+..+....++. +|-.+|..| .||.
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~------~t~keYAiKVl~K~~Iike~KvkYV~-------~Ek~~l~~L~~hPg 135 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREK------ATGKEYAIKVLDKRYIIKEKKVKYVT-------REKEALTQLSGHPG 135 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeec------CCCceeeHhhhhHHHHHhhcccchhh-------HHHHHHHHhhCCCC
Confidence 344679999999999999999999974 68999999999998888887778887 899999999 7999
Q ss_pred cccccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 237 IV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
||+||..|+++..+|+|+||+++ +|.++|+ +.+.+.+..+|+|+.||+.||+|||++|||||||||+||||+.++
T Consensus 136 ivkLy~TFQD~~sLYFvLe~A~nGdll~~i~--K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dm-- 211 (604)
T KOG0592|consen 136 IVKLYFTFQDEESLYFVLEYAPNGDLLDLIK--KYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDG-- 211 (604)
T ss_pred eEEEEEEeecccceEEEEEecCCCcHHHHHH--HhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCC--
Confidence 99999999999999999999996 9999998 567799999999999999999999999999999999999999999
Q ss_pred hhhhcCcCCCCccccccccCC--CCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccc
Q 000399 316 WLYICDKPLVGFNSIADWCTI--PTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~--~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
++||+|||.|+.......... ............++||..|.+||++....-+..+|+|..||| .+-+++|.
T Consensus 212 hikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCi-------lyQmlaG~ 284 (604)
T KOG0592|consen 212 HIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCI-------LYQMLAGQ 284 (604)
T ss_pred cEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHH-------HHHHhcCC
Confidence 899999999997664222110 001001111256889999999999999999999999999999 88999998
Q ss_pred c-cCCccceeecceeEeeccCCCCCCCccccccccccccccc
Q 000399 394 R-WGDYTFHMVMPWVIDFSTKPDENFDSGSRDLSKSKWRLAK 434 (1566)
Q Consensus 394 s-~~dl~q~pv~pwv~d~~~~~~~~~~~~~rdLskp~~~l~~ 434 (1566)
+ |.+-++|-+|.-|++..-......|...|||.+-+.+...
T Consensus 285 PPFra~NeyliFqkI~~l~y~fp~~fp~~a~dLv~KLLv~dp 326 (604)
T KOG0592|consen 285 PPFRAANEYLIFQKIQALDYEFPEGFPEDARDLIKKLLVRDP 326 (604)
T ss_pred CCCccccHHHHHHHHHHhcccCCCCCCHHHHHHHHHHHccCc
Confidence 8 6889999999999844333344566888888877665544
No 25
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-35 Score=337.04 Aligned_cols=201 Identities=18% Similarity=0.215 Sum_probs=178.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||+||.++.+ .+++.+|+|++++..+......+... +|..||..++||+||.+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~------dt~kiYAmKvl~K~~iv~~~e~~~~~-------~Er~IL~~v~hPFiv~l 90 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKK------DTGKIYAMKVLKKKKIVEKKEVRHTK-------AERNILSKIKHPFIVKL 90 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEc------ccCceeehhhhhhhHhhhhhhHHHHH-------HHHHHHHhCCCCcEeee
Confidence 578999999999999999998863 78999999999998877664444443 79999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
+..|++.+.+|||+||+.| +|+..|+ +.+.+++..+++|+.+|+.||.|||++|||||||||+||||+.+| +++|
T Consensus 91 ~ysFQt~~kLylVld~~~GGeLf~hL~--~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~G--Hi~L 166 (357)
T KOG0598|consen 91 IYSFQTEEKLYLVLDYLNGGELFYHLQ--REGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQG--HIKL 166 (357)
T ss_pred EEecccCCeEEEEEeccCCccHHHHHH--hcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCC--cEEE
Confidence 9999999999999999997 9999998 567799999999999999999999999999999999999999999 8999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccccC
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWG 396 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~ 396 (1566)
+|||+++....... ...+++||+.|||||++.+..|+..+|+|+.|.+ ++.++.|.++.
T Consensus 167 tDFgL~k~~~~~~~-----------~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGil-------lYeML~G~pPF 225 (357)
T KOG0598|consen 167 TDFGLCKEDLKDGD-----------ATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGIL-------LYEMLTGKPPF 225 (357)
T ss_pred eccccchhcccCCC-----------ccccccCCccccChHHHhcCCCCcccchHhHHHH-------HHHHhhCCCCC
Confidence 99999996553111 1123569999999999999999999999999987 78888887753
No 26
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4.3e-34 Score=319.18 Aligned_cols=267 Identities=18% Similarity=0.211 Sum_probs=219.4
Q ss_pred ccccccccccchHHHHHHhhccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee--eehhhhhccCcceee
Q 000399 1258 PQRRVYDYHKSSVERQEATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS--ILSSIRAHHGALRSV 1333 (1566)
Q Consensus 1258 ~~~~~~~le~~~~~~~~~~~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~--~l~tl~gH~~~V~sl 1333 (1566)
...|++|+......- +.-.|..||.| .||||++ ||||+.||+|++||.+++ .-..++||...|+++
T Consensus 137 ~TvR~WD~~TeTp~~-----t~KgH~~WVlcvawsPDgk~-----iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~L 206 (480)
T KOG0271|consen 137 TTVRLWDLDTETPLF-----TCKGHKNWVLCVAWSPDGKK-----IASGSKDGSIRLWDPKTGQQIGRALRGHKKWITAL 206 (480)
T ss_pred ceEEeeccCCCCcce-----eecCCccEEEEEEECCCcch-----hhccccCCeEEEecCCCCCcccccccCcccceeEE
Confidence 456777776554433 33459999999 7999999 999999999999999876 568899999999999
Q ss_pred eecC-----cceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEE
Q 000399 1334 AVGQ-----DECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLL 1406 (1566)
Q Consensus 1334 afsp-----d~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l 1406 (1566)
+|.| ...+|+|+|+ ||+|+|||+..+.|+.++.||+.+|+||+|-. .++|.|+ |++|++|+...|++.
T Consensus 207 awep~hl~p~~r~las~sk----Dg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG-~gliySgS~DrtIkvw~a~dG~~~ 281 (480)
T KOG0271|consen 207 AWEPLHLVPPCRRLASSSK----DGSVRIWDTKLGTCVRTLSGHTASVTCVRWGG-EGLIYSGSQDRTIKVWRALDGKLC 281 (480)
T ss_pred eecccccCCCccceecccC----CCCEEEEEccCceEEEEeccCccceEEEEEcC-CceEEecCCCceEEEEEccchhHH
Confidence 9987 5679999998 99999999999999999999999999999743 3466776 999999999999999
Q ss_pred EEeeccccccccc-----------------------------------------------CCCCCcccccccCC--CCCC
Q 000399 1407 SVFAEQSMDSLHG-----------------------------------------------GSPSSSISKINTDQ--VGML 1437 (1566)
Q Consensus 1407 ~~l~~h~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~--~~~~ 1437 (1566)
+++++|...+.+. ++.+....+|.... ....
T Consensus 282 r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~ 361 (480)
T KOG0271|consen 282 RELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPIT 361 (480)
T ss_pred HhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchh
Confidence 9998875442211 11112222333211 2233
Q ss_pred CCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccC
Q 000399 1438 NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQA 1517 (1566)
Q Consensus 1438 ~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~ 1517 (1566)
...+|..-|+.+.|+|+ +++++++|.|.+||+||-++|+.+.+|+|| -+.|+.|+++
T Consensus 362 rmtgHq~lVn~V~fSPd----------~r~IASaSFDkSVkLW~g~tGk~lasfRGH------v~~VYqvaws------- 418 (480)
T KOG0271|consen 362 RMTGHQALVNHVSFSPD----------GRYIASASFDKSVKLWDGRTGKFLASFRGH------VAAVYQVAWS------- 418 (480)
T ss_pred hhhchhhheeeEEECCC----------ccEEEEeecccceeeeeCCCcchhhhhhhc------cceeEEEEec-------
Confidence 45567777888888876 999999999999999999999999999988 4566777765
Q ss_pred CCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1518 GGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1518 ~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
.|.++|+|||.|.++++||+++.++...+.||...|.+|.|+|||
T Consensus 419 ----aDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG 463 (480)
T KOG0271|consen 419 ----ADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDG 463 (480)
T ss_pred ----cCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCC
Confidence 556799999999999999999999999999999999999999998
No 27
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=326.25 Aligned_cols=239 Identities=22% Similarity=0.217 Sum_probs=197.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|+.++.||.|+||.|.+++++ .++..+|+|++.+.+.......+... +|..+|+.+.||++++|
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k------~~g~yYAmKvL~k~~vVklKQveH~~-------nEk~vL~~v~~PFlv~l 109 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREK------HSGNYYAMKVLDKQKVVKLKQVEHTH-------NEKRVLKAVSHPFLVKL 109 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEc------cCCceeehhhcCHHHHHHHHHHHHHh-------hHHHHHhhccCceeEEE
Confidence 578999999999999999999875 67999999999998777665556655 89999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.|.+.+++||||||++| .|+.+++ +.+.+++..+++|+.||+.||+|||+++|++|||||+|||||.+| ++||
T Consensus 110 ~~t~~d~~~lymvmeyv~GGElFS~Lr--k~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G--~iKi 185 (355)
T KOG0616|consen 110 YGTFKDNSNLYMVMEYVPGGELFSYLR--KSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNG--HIKI 185 (355)
T ss_pred EEeeccCCeEEEEEeccCCccHHHHHH--hcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCC--cEEE
Confidence 9999999999999999997 9999999 456699999999999999999999999999999999999999999 8999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc-CCc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW-GDY 398 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~-~dl 398 (1566)
+|||+|+...+ .+. +.+|||.|+|||++..++|...+|+|..|++ .+++++|.++ .+-
T Consensus 186 tDFGFAK~v~~-------rT~-------TlCGTPeYLAPEii~sk~ynkavDWWalGVL-------IYEMlaG~pPF~~~ 244 (355)
T KOG0616|consen 186 TDFGFAKRVSG-------RTW-------TLCGTPEYLAPEIIQSKGYNKAVDWWALGVL-------IYEMLAGYPPFYDD 244 (355)
T ss_pred EeccceEEecC-------cEE-------EecCCccccChHHhhcCCCCcchhHHHHHHH-------HHHHHcCCCCCcCC
Confidence 99999997663 112 2349999999999999999999999999977 8999999884 444
Q ss_pred cceeecceeE--e--eccCC-----CCCCCcccccccccccccccCCc
Q 000399 399 TFHMVMPWVI--D--FSTKP-----DENFDSGSRDLSKSKWRLAKGDE 437 (1566)
Q Consensus 399 ~q~pv~pwv~--d--~~~~~-----~~~~~~~~rdLskp~~~l~~~~~ 437 (1566)
+...++.-|+ + |.+.. |+..-..-+|++|..|.+..|.+
T Consensus 245 ~~~~iY~KI~~~~v~fP~~fs~~~kdLl~~LL~vD~t~R~gnlknG~~ 292 (355)
T KOG0616|consen 245 NPIQIYEKILEGKVKFPSYFSSDAKDLLKKLLQVDLTKRFGNLKNGVE 292 (355)
T ss_pred ChHHHHHHHHhCcccCCcccCHHHHHHHHHHHhhhhHhhhcCcCCCcc
Confidence 4333333333 1 11110 22223445677777777665544
No 28
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-34 Score=334.51 Aligned_cols=162 Identities=21% Similarity=0.193 Sum_probs=129.9
Q ss_pred chhhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcC----CCCCCCCCCCCc
Q 000399 156 SCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIG----VPSFDESSVPGC 231 (1566)
Q Consensus 156 ~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g----~~~~rEi~iL~~ 231 (1566)
......++|++++.||+|.||.|-+|++ ..+++.||||++.+.+...+.........+ ....+||.||++
T Consensus 91 ~~~k~lNqy~l~~eiG~G~yGkVkLar~------~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKk 164 (576)
T KOG0585|consen 91 QDRKQLNQYELIKEIGSGQYGKVKLARD------EVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKK 164 (576)
T ss_pred ccceehhheehhhhhcCCccceEEEEee------cCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHh
Confidence 3345577999999999999999999997 368999999999886543322110000000 012479999999
Q ss_pred ccCCCccccccccccc--CceeeeccCCcc-chhhhhccCcccc-cchhHHHHHHHHHHHHHHHHhhccccCCCccCCCc
Q 000399 232 LRHPNVAPVLGLLKTS--GLITSVIPKTPY-TLENILQFSPNAL-KSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 307 (1566)
Q Consensus 232 l~HpNIV~l~~~~~~~--~~l~LV~E~~~g-sL~~~l~~~~~~~-l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NI 307 (1566)
|+|||||+|+++..+. +.+|||+|||.. .+...= ..++ +++.+++.|++.++.||+|||.+|||||||||+|+
T Consensus 165 l~H~nVV~LiEvLDDP~s~~~YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNL 241 (576)
T KOG0585|consen 165 LHHPNVVKLIEVLDDPESDKLYLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNL 241 (576)
T ss_pred cCCcCeeEEEEeecCcccCceEEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhhe
Confidence 9999999999999765 599999999974 443332 3444 89999999999999999999999999999999999
Q ss_pred cccccchhhhhhcCcCCCCcc
Q 000399 308 LLTDSCWSWLYICDKPLVGFN 328 (1566)
Q Consensus 308 Ll~~~~~~~vKL~DFGlA~~~ 328 (1566)
||+++| ++||+|||.+...
T Consensus 242 Ll~~~g--~VKIsDFGVs~~~ 260 (576)
T KOG0585|consen 242 LLSSDG--TVKISDFGVSNEF 260 (576)
T ss_pred EEcCCC--cEEeeccceeeec
Confidence 999999 8999999998754
No 29
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-34 Score=333.08 Aligned_cols=150 Identities=21% Similarity=0.217 Sum_probs=127.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|...+.||+|+||.||++.+. .++...|||.+....... .+-+. +|+.+|.+++|||||++
T Consensus 16 ~~~~~~~~~lG~Gs~G~V~l~~~~------~~g~~~AvK~v~~~~~~~---~~~l~-------~Ei~iL~~l~~p~IV~~ 79 (313)
T KOG0198|consen 16 ISNWSKGKLLGRGSFGSVYLATNK------KTGELMAVKSVELEDSPT---SESLE-------REIRILSRLNHPNIVQY 79 (313)
T ss_pred cchhhhhccccCccceEEEEEEec------CCCcceeeeeeecccchh---HHHHH-------HHHHHHHhCCCCCEEee
Confidence 346889999999999999998863 458999999987652111 22222 79999999999999999
Q ss_pred cccccccC--ceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc-cchhh
Q 000399 241 LGLLKTSG--LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-SCWSW 316 (1566)
Q Consensus 241 ~~~~~~~~--~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~-~~~~~ 316 (1566)
+|...... .+++.|||+++ +|.+++..... .+++..++.+.+||+.||.|||++|||||||||+|||++. ++ .
T Consensus 80 ~G~~~~~~~~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~--~ 156 (313)
T KOG0198|consen 80 YGSSSSRENDEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNG--D 156 (313)
T ss_pred CCccccccCeeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCC--e
Confidence 99865555 69999999997 99999985444 6899999999999999999999999999999999999999 56 6
Q ss_pred hhhcCcCCCCccc
Q 000399 317 LYICDKPLVGFNS 329 (1566)
Q Consensus 317 vKL~DFGlA~~~~ 329 (1566)
+||+|||+++...
T Consensus 157 ~KlaDFG~a~~~~ 169 (313)
T KOG0198|consen 157 VKLADFGLAKKLE 169 (313)
T ss_pred EEeccCccccccc
Confidence 9999999998544
No 30
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.98 E-value=7.6e-34 Score=312.23 Aligned_cols=161 Identities=18% Similarity=0.196 Sum_probs=131.4
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
.....|+.+..||+|+||.||+|..+. +.....+.+|||.++..+.. .+. ..+++||+.+++.++||||+
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~--~n~kr~k~yAiKkfk~~kd~-tGi-------S~SAcREiaL~REl~h~nvi 90 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKN--TNDKRTKEYAIKKFKGEKDG-TGI-------SMSACREIALLRELKHPNVI 90 (438)
T ss_pred HHHHHhhccceecccccceeeEeeecc--CCcccchhhHHHHHhccCCC-CCc-------CHHHHHHHHHHHHhcCCcch
Confidence 345689999999999999999996432 21122558999998765321 111 12457899999999999999
Q ss_pred cccccccc-cCceeeeccCCccchhhhhccCc---ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch
Q 000399 239 PVLGLLKT-SGLITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1566)
Q Consensus 239 ~l~~~~~~-~~~l~LV~E~~~gsL~~~l~~~~---~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~ 314 (1566)
.|..+|.. +..++|++||.+.+|..+|++.. ...++...++.++.||+.|+.|||++-|+||||||.|||+..++.
T Consensus 91 ~Lv~Vfl~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgp 170 (438)
T KOG0666|consen 91 SLVKVFLSHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGP 170 (438)
T ss_pred hHHHHHhccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCC
Confidence 99999987 77999999999999999998633 345788899999999999999999999999999999999998822
Q ss_pred --hhhhhcCcCCCCccc
Q 000399 315 --SWLYICDKPLVGFNS 329 (1566)
Q Consensus 315 --~~vKL~DFGlA~~~~ 329 (1566)
..|||+|||+||...
T Consensus 171 erG~VKIaDlGlaR~~~ 187 (438)
T KOG0666|consen 171 ERGRVKIADLGLARLFN 187 (438)
T ss_pred ccCeeEeecccHHHHhh
Confidence 289999999998533
No 31
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=1.9e-33 Score=321.41 Aligned_cols=153 Identities=20% Similarity=0.243 Sum_probs=137.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|.-|+||+|+.+ .++..+|+|++.+....... +.. ++..|.+||+.++||.++.|
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~------~t~~~fAmKVmdK~~l~~rk--Kl~-----Ra~tE~eIL~~lDHPFlPTL 142 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELR------GTNCLFAMKVMDKESLASRK--KLK-----RAQTEREILSLLDHPFLPTL 142 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEec------CCCceEEEEEecHHHHhhhh--HHH-----HHHHHHHHHHhcCCCccchh
Confidence 458999999999999999999863 45699999999987654422 222 33479999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
|+.|+++...|+|||||+| +|..+.+..+.+.+++..+++|+.+|+.||+|||-.|||+|||||+||||-++| +|-|
T Consensus 143 Ya~fet~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredG--HIML 220 (459)
T KOG0610|consen 143 YASFETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDG--HIML 220 (459)
T ss_pred hheeeccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCC--cEEe
Confidence 9999999999999999997 999999998899999999999999999999999999999999999999999999 8999
Q ss_pred cCcCCCCcc
Q 000399 320 CDKPLVGFN 328 (1566)
Q Consensus 320 ~DFGlA~~~ 328 (1566)
+||-|+...
T Consensus 221 sDFDLS~~~ 229 (459)
T KOG0610|consen 221 SDFDLSLRC 229 (459)
T ss_pred eeccccccC
Confidence 999998754
No 32
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1e-33 Score=306.09 Aligned_cols=176 Identities=18% Similarity=0.201 Sum_probs=146.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc--cccchhhhcCCCCCCCCCCCCcc-cCCCc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ--ESKNFLRLIGVPSFDESSVPGCL-RHPNV 237 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~--~~~~~l~~~g~~~~rEi~iL~~l-~HpNI 237 (1566)
..+|+.-+.||+|..++|.+|.++ +++..+|+|++........ ...+.+. ...+|+.||+++ .||||
T Consensus 16 y~~y~pkeilgrgvss~vrRci~k------~t~~e~a~kii~~~at~~~~e~~~~~~E----aT~~Ev~ILRqv~GHP~I 85 (411)
T KOG0599|consen 16 YAKYEPKEILGRGVSSVVRRCIHK------ETGKEFAVKIIDVTATTESGETPYEMRE----ATRQEISILRQVMGHPYI 85 (411)
T ss_pred HhhcChHHHhcccchhhhhhhhhc------ccccceeEEEEEecccccCCccHHHHHH----HHHHHHHHHHHhcCCCcE
Confidence 457899999999999999999874 6888999999886543222 2222222 446899999999 59999
Q ss_pred ccccccccccCceeeeccCCc-cchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 238 APVLGLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 238 V~l~~~~~~~~~l~LV~E~~~-gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
+++.++|+++..+++|+|.|+ |.|+|+|. ..-.+++...+.+++|+..|+.|||.++||||||||+|||++++. .
T Consensus 86 I~l~D~yes~sF~FlVFdl~prGELFDyLt--s~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~--~ 161 (411)
T KOG0599|consen 86 IDLQDVYESDAFVFLVFDLMPRGELFDYLT--SKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNM--N 161 (411)
T ss_pred EEeeeeccCcchhhhhhhhcccchHHHHhh--hheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeecccc--c
Confidence 999999999999999999999 59999998 355689999999999999999999999999999999999999999 6
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~ 362 (1566)
+||+|||+|+..... .+ ....+|||.|.|||.+.
T Consensus 162 i~isDFGFa~~l~~G--------ek----LrelCGTPgYLAPEtik 195 (411)
T KOG0599|consen 162 IKISDFGFACQLEPG--------EK----LRELCGTPGYLAPETIK 195 (411)
T ss_pred eEEeccceeeccCCc--------hh----HHHhcCCCcccChhhee
Confidence 999999999976532 11 12235999999998763
No 33
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=8e-33 Score=309.03 Aligned_cols=233 Identities=17% Similarity=0.291 Sum_probs=204.6
Q ss_pred hccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCccc
Q 000399 1277 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1277 ~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~ 1353 (1566)
+....|.+.|.+ |||+|.. |+|||.|.++++||+.+. ...+.+||...|.||+|+|||..+|||+. ||
T Consensus 109 sS~~GH~e~Vl~~~fsp~g~~-----l~tGsGD~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~----dg 179 (480)
T KOG0271|consen 109 SSIAGHGEAVLSVQFSPTGSR-----LVTGSGDTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSK----DG 179 (480)
T ss_pred cccCCCCCcEEEEEecCCCce-----EEecCCCceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhcccc----CC
Confidence 456679999998 9999998 999999999999999987 78999999999999999999999999999 99
Q ss_pred ceeeEEecccccc-cccccccccccceEEee-----cCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCc
Q 000399 1354 TVQKWELTRINCV-SGYYGHEEVVNDICVLS-----SSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSS 1425 (1566)
Q Consensus 1354 tVrlWDl~tg~~i-~tl~gH~~~V~sVafsp-----~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~ 1425 (1566)
+|++||..+|+++ +.+.||...|++++|.| ..+++||+ ||+|+|||+..|+++.++.+|
T Consensus 180 ~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgH------------- 246 (480)
T KOG0271|consen 180 SIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGH------------- 246 (480)
T ss_pred eEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccC-------------
Confidence 9999999998765 67999999999999965 56678877 999999999999999988876
Q ss_pred ccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHH
Q 000399 1426 ISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVS 1505 (1566)
Q Consensus 1426 ~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~ 1505 (1566)
+..|+|+.|-.+ .++++||.|++|++|+...|.+++.+++|. ++|+
T Consensus 247 -----------------T~~VTCvrwGG~-----------gliySgS~DrtIkvw~a~dG~~~r~lkGHa------hwvN 292 (480)
T KOG0271|consen 247 -----------------TASVTCVRWGGE-----------GLIYSGSQDRTIKVWRALDGKLCRELKGHA------HWVN 292 (480)
T ss_pred -----------------ccceEEEEEcCC-----------ceEEecCCCceEEEEEccchhHHHhhcccc------hhee
Confidence 566888888754 499999999999999999999999999884 4445
Q ss_pred Hhhcc-----------CCC---------------------------------------------------------cccC
Q 000399 1506 AICAC-----------GSE---------------------------------------------------------KMQA 1517 (1566)
Q Consensus 1506 sv~~s-----------~~~---------------------------------------------------------~~~~ 1517 (1566)
.++.+ +.+ .+..
T Consensus 293 ~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~ 372 (480)
T KOG0271|consen 293 HLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNH 372 (480)
T ss_pred eeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheee
Confidence 44443 111 0112
Q ss_pred CCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeecc
Q 000399 1518 GGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1518 ~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafspd 1565 (1566)
..||||+++|||+|-|..|++||.++|+-+.+++||-+.|+.|+|+.|
T Consensus 373 V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaD 420 (480)
T KOG0271|consen 373 VSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSAD 420 (480)
T ss_pred EEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccC
Confidence 338999999999999999999999999999999999999999999987
No 34
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=4.2e-33 Score=320.90 Aligned_cols=155 Identities=15% Similarity=0.170 Sum_probs=135.8
Q ss_pred hhhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCC
Q 000399 157 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 236 (1566)
Q Consensus 157 ~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpN 236 (1566)
..++.+=|.+.+.||+|-|++|-+|++.| +|..||||++.+.+...-....++ +|++.|+.++|||
T Consensus 13 DgkIAGLYDLekTlG~GHFAVVKLArHVF------TGekVAVKviDKTKlD~~st~hlf--------qEVRCMKLVQHpN 78 (864)
T KOG4717|consen 13 DGKIAGLYDLEKTLGRGHFAVVKLARHVF------TGEKVAVKVIDKTKLDTLSTGHLF--------QEVRCMKLVQHPN 78 (864)
T ss_pred ccceeeeehhhhhhcCCceehhhhhhhhc------ccceeEEEEecccccchhhhhHHH--------HHHHHHHHhcCcC
Confidence 33556679999999999999999999965 899999999999887665544444 5999999999999
Q ss_pred cccccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 237 IV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
||+||++..+...+|||+|+-++ +|+++|.... ..+.+..++.|+.||+.|+.|||...||||||||+|+.+-+.. .
T Consensus 79 iVRLYEViDTQTKlyLiLELGD~GDl~DyImKHe-~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKl-G 156 (864)
T KOG4717|consen 79 IVRLYEVIDTQTKLYLILELGDGGDLFDYIMKHE-EGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKL-G 156 (864)
T ss_pred eeeeeehhcccceEEEEEEecCCchHHHHHHhhh-ccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeec-C
Confidence 99999999999999999999997 9999998644 4478999999999999999999999999999999998877654 2
Q ss_pred hhhhcCcCCCCc
Q 000399 316 WLYICDKPLVGF 327 (1566)
Q Consensus 316 ~vKL~DFGlA~~ 327 (1566)
-+||+|||++..
T Consensus 157 lVKLTDFGFSNk 168 (864)
T KOG4717|consen 157 LVKLTDFGFSNK 168 (864)
T ss_pred ceEeeecccccc
Confidence 799999998763
No 35
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=8.1e-35 Score=316.85 Aligned_cols=192 Identities=20% Similarity=0.200 Sum_probs=167.2
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
...+|+++++||+|+||+||++.+ +.++..+|.|.+.-+....+.....+ .|+.+|++|+|||||+
T Consensus 17 ~l~~y~Il~~IG~GsFg~vykv~~------~~~g~l~a~K~i~f~~md~k~rq~~v--------~Ei~lLkQL~HpNIVq 82 (375)
T KOG0591|consen 17 TLADYQILKKIGRGSFGEVYKVQC------LLDGKLVALKKIQFGMMDAKARQDCV--------KEISLLKQLNHPNIVQ 82 (375)
T ss_pred cHHHHHHHHHHcCCcchheEEeee------ccCcchhhhhhcchhhccHHHHHHHH--------HHHHHHHhcCCchHHH
Confidence 356899999999999999999986 47999999999987666655555555 5999999999999999
Q ss_pred ccc-cccccCc-eeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhh--cc--ccCCCccCCCcccc
Q 000399 240 VLG-LLKTSGL-ITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHS--LG--IAHRSVCPSNVLLT 310 (1566)
Q Consensus 240 l~~-~~~~~~~-l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~--~g--IiHrDLKp~NILl~ 310 (1566)
+|+ .|.++.. ++||||||++ +|..+|++- .+..++|..++.++.|+|.||.+||. .+ |+||||||.||+|+
T Consensus 83 Yy~~~f~~~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~ 162 (375)
T KOG0591|consen 83 YYAHSFIEDNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLT 162 (375)
T ss_pred HHHHhhhccchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEc
Confidence 999 5655555 9999999995 999999853 34569999999999999999999999 55 99999999999999
Q ss_pred ccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 311 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 311 ~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
.+| .+||.|||++|.... ...+..+.+|||+||+||++.+.+|+.+.|+|+.||+
T Consensus 163 ~~g--vvKLGDfGL~r~l~s-----------~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCl 217 (375)
T KOG0591|consen 163 ANG--VVKLGDFGLGRFLSS-----------KTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCL 217 (375)
T ss_pred CCC--ceeeccchhHhHhcc-----------hhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHH
Confidence 999 799999999997652 1225567789999999999999999999999999998
No 36
>KOG1786 consensus Lysosomal trafficking regulator LYST and related BEACH and WD40 repeat proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.97 E-value=5e-33 Score=366.60 Aligned_cols=241 Identities=40% Similarity=0.624 Sum_probs=200.7
Q ss_pred hhhccccccccccCCchhhhHHHhhcccccCCccceeecceeEeec-cC-CCCCCCccccccccccccccc-CCcceeee
Q 000399 366 WHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVIDFS-TK-PDENFDSGSRDLSKSKWRLAK-GDEQLDFT 442 (1566)
Q Consensus 366 y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~dl~q~pv~pwv~d~~-~~-~~~~~~~~~rdLskp~~~l~~-~~~~~~~~ 442 (1566)
..+.+..|..|.++||+|||.+|.++||+++|+.+||||||++++. .. .+..++..+|++.|+++.... +.++....
T Consensus 335 ~~s~~~~W~~~~~~n~~yl~~ln~l~~r~~~~~~~~pi~pw~~~~~~~~~l~~~d~~~~r~~~~~~~~~s~e~~~~~~~r 414 (1081)
T KOG1786|consen 335 LKSAFGRWLSGELENFQYLMHLNTLAGRSIADLAQYPIFPWVLAFYDFSGLDLLDPLTARKLLKLGGHQSDEGYERFAKR 414 (1081)
T ss_pred hhhhhcccccCchhhhhhhhhcCcccccchhhhccCcccceeeccccccchhhcChHhhhhhhhccCCCCHHHHHHHhhh
Confidence 5678899999999999999999999999999999999999999543 33 478899999999999854332 12222333
Q ss_pred eec------CCCCccccHhhhhhhccccccccccchhHHHHhhhhccCCCCCchhhhhhhccCCCC----------ccCc
Q 000399 443 YSS------SEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSVYEPNEYPSTMQRLYQWTPDE----------CIPE 506 (1566)
Q Consensus 443 ~~~------~~~~~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~E----------liPE 506 (1566)
|.. ....+||.++++|+.+++.|++|..|++.++..++.+|.+..++..++++..|++.+ +|||
T Consensus 415 ~~~~~d~~~~~~~~~~~t~~~S~~~~~~y~~r~~p~~~~~~~i~~~~~~~~d~~~~s~~~~Wt~~~~~~~~~~i~eli~~ 494 (1081)
T KOG1786|consen 415 FEEWLDQNAEDPLFHVLTHLLSPLIVMSYFARKNPLSELFLSIRRGYFPIADRLFHSRMQAWTPDEKGNLHSCIKELIPK 494 (1081)
T ss_pred hhhhhccccccccccccccccchhhhhhhhhhcCcchHHHHHhhcccccccchhhhhhhcccCcccccccchhHHHHHHH
Confidence 322 223479999999999999999999999999999999998888877788888887655 6788
Q ss_pred cccCcchhhc-------cCCC---CcccccCCCCC-ChHHHHHHhhhhhcccccceeeeeeEEee-eecccccccccccc
Q 000399 507 FYCDPQIFYS-------QHPG---MTDLAVPPWAG-SPEEFIKLHRDALESDRVSSRIHHWIDIT-FGYKMSGQAAIDAK 574 (1566)
Q Consensus 507 ff~~p~~~~~-------~~~~---~~dv~lP~Wa~-~~~~Fi~~~r~aLEs~~Vs~~l~~WIDLi-fG~kq~g~~a~~a~ 574 (1566)
||++|+||.| .+.. ++||.|||||. +|++||.+||+|||++|||++||+|||++ |||||.|++|+.+.
T Consensus 495 ~~~~p~~l~n~~~~~lg~~~~~~~~~~~~lP~ws~~~~~~fi~~h~~ale~~~vs~~Lh~wId~~~fgykq~g~~~~~~~ 574 (1081)
T KOG1786|consen 495 FVNDPSFLENSVILDLGEKQNGDSVDDVILPPWSSSSPREFIRDHRKALESNRVSQRLHHWIDLTIFGYKQNGSAAVIAM 574 (1081)
T ss_pred hccChHHHhhhhhhhhhhhcccccccceecCcccccCHHHHHHHHhhcccccchhhccccceeeehhhhhhcchHHHHHH
Confidence 8899999998 3333 89999999998 79999999999999999999999999999 99999999999999
Q ss_pred cccc----cCCCCC---------------C---Ccccc--ccccccCCCCcccccc
Q 000399 575 NVML----PSSEPT---------------K---PKSVG--RLQLFTQPHPVRQTAT 606 (1566)
Q Consensus 575 Nvf~----~~~~~~---------------~---~~~~g--~~qlF~~pHp~r~~~~ 606 (1566)
|||+ +..+.. + ...+| |+|+|.++||.+....
T Consensus 575 nv~~~~~~~l~~~~~v~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~~~h~~~~~~~ 630 (1081)
T KOG1786|consen 575 NVFLVSNKHLFYVNSVLNLRGYDPLEQNILIVSNNHFKQTIKQLFPKKHSVSELTE 630 (1081)
T ss_pred HHHhhhhhhhccccchhhhcccchhhhhhhHHHhhccccchhhcccccccccccch
Confidence 9999 654321 0 11234 6999999999987765
No 37
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.2e-33 Score=329.23 Aligned_cols=168 Identities=17% Similarity=0.137 Sum_probs=140.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
...|....+||+|+.|.||.|+. ..++..||||.+...+... ++.+ +.|+.+|+..+|+|||.+
T Consensus 272 ~~~y~~~~kigqgaSG~vy~A~~------~~~~~~VaiK~m~l~~Q~~---keLi-------lnEi~Vm~~~~H~NiVnf 335 (550)
T KOG0578|consen 272 RSKYTDFKKIGQGATGGVYVARK------ISTKQEVAIKRMDLRKQPK---KELL-------LNEILVMRDLHHPNIVNF 335 (550)
T ss_pred hhhhcchhhhccccccceeeeee------ccCCceEEEEEEEeccCCc---hhhh-------HHHHHHHHhccchHHHHH
Confidence 44788999999999999999885 3578889999998754333 3333 479999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.|...+.+|+||||++| +|-+++.. ..++|.++..|++++++||+|||.+||||||||.+|||++.++ .+||
T Consensus 336 l~Sylv~deLWVVMEym~ggsLTDvVt~---~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g--~vKl 410 (550)
T KOG0578|consen 336 LDSYLVGDELWVVMEYMEGGSLTDVVTK---TRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDG--SVKL 410 (550)
T ss_pred HHHhcccceeEEEEeecCCCchhhhhhc---ccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCC--cEEE
Confidence 9999999999999999997 99999973 3489999999999999999999999999999999999999999 6999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKL 360 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 360 (1566)
+|||++........ .....+|||+|||||+
T Consensus 411 tDFGFcaqi~~~~~-----------KR~TmVGTPYWMAPEV 440 (550)
T KOG0578|consen 411 TDFGFCAQISEEQS-----------KRSTMVGTPYWMAPEV 440 (550)
T ss_pred eeeeeeeccccccC-----------ccccccCCCCccchhh
Confidence 99999886542110 1122357777777765
No 38
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=7.4e-32 Score=305.76 Aligned_cols=224 Identities=20% Similarity=0.235 Sum_probs=205.9
Q ss_pred ccccCCCceec--cCCC--CCCCCCcccccccCccCCCCceEee-eeehhhhhccCcceeeeecCcceEEEeeccCCCcc
Q 000399 1278 NLMKCEPWFWF--PTPA--ASWDGPDFLGRVGGLKDESPWKIKA-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1352 (1566)
Q Consensus 1278 ~~~~H~~~V~~--fSpd--g~~~~~~~LaSgS~D~~I~vWdl~~-~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D 1352 (1566)
.+..|++.|-+ |+|. +.- +|||+.||+|++|++++ ..++.+.||...|..|+|+|+|++|+|+|- |
T Consensus 212 ~l~gH~~~v~~~~fhP~~~~~~-----lat~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~Tasf----D 282 (459)
T KOG0272|consen 212 TLRGHTSRVGAAVFHPVDSDLN-----LATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASF----D 282 (459)
T ss_pred EEeccccceeeEEEccCCCccc-----eeeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeeccc----c
Confidence 34568888887 8887 333 99999999999999998 489999999999999999999999999996 9
Q ss_pred cceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccc
Q 000399 1353 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKIN 1430 (1566)
Q Consensus 1353 ~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~ 1430 (1566)
.|-++||+.+++.+....||...|.+|+|.++|..++|| |..-+|||+++|+++..+.+|
T Consensus 283 ~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH------------------ 344 (459)
T KOG0272|consen 283 STWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGH------------------ 344 (459)
T ss_pred cchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEeccc------------------
Confidence 999999999999999999999999999999999999998 999999999999999999886
Q ss_pred cCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhcc
Q 000399 1431 TDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICAC 1510 (1566)
Q Consensus 1431 ~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s 1510 (1566)
...|.+|+|+|+ |..++|||.|++++|||++..+++.++.+| .+.|+.|+|+
T Consensus 345 ------------~k~I~~V~fsPN----------Gy~lATgs~Dnt~kVWDLR~r~~ly~ipAH------~nlVS~Vk~~ 396 (459)
T KOG0272|consen 345 ------------IKEILSVAFSPN----------GYHLATGSSDNTCKVWDLRMRSELYTIPAH------SNLVSQVKYS 396 (459)
T ss_pred ------------ccceeeEeECCC----------ceEEeecCCCCcEEEeeecccccceecccc------cchhhheEec
Confidence 567999999998 889999999999999999999999888876 6678999998
Q ss_pred CCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1511 GSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1511 ~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
|. .|.+|+|+|.|+++++|..+++.+++++.||++.|-+|+++|||
T Consensus 397 p~----------~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~ 442 (459)
T KOG0272|consen 397 PQ----------EGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDS 442 (459)
T ss_pred cc----------CCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCC
Confidence 63 34689999999999999999999999999999999999999986
No 39
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97 E-value=1e-32 Score=331.63 Aligned_cols=154 Identities=21% Similarity=0.235 Sum_probs=134.1
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCcc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVA 238 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV 238 (1566)
....|++.+.||+|.||.||+|+++ .+|..+|+|.+.+.........+.+. +|+.+|+++. |||||
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~------~tg~~~A~K~i~k~~~~~~~~~~~v~-------~Ev~il~~l~~hpniv 99 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREK------STGKEVACKVIPKRKLRGKEDREDVR-------REVAILQQLSGHPNIV 99 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEec------CCCceeEEEEeehhhccccccHHHHH-------HHHHHHHhccCCCCEE
Confidence 3557999999999999999999874 56999999999987665443333443 7999999998 99999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch--h
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW--S 315 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~--~ 315 (1566)
.++++|++...+++|||+|.| .|++.|... .+++..+..++.|++.|+.|||+.||+||||||+|+|+..... .
T Consensus 100 ~l~~~~e~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~ 176 (382)
T KOG0032|consen 100 QLKDAFEDPDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSG 176 (382)
T ss_pred EEEEEEEcCCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCC
Confidence 999999999999999999996 999999854 3899999999999999999999999999999999999986642 3
Q ss_pred hhhhcCcCCCCccc
Q 000399 316 WLYICDKPLVGFNS 329 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~ 329 (1566)
.+|++|||+|....
T Consensus 177 ~ik~~DFGla~~~~ 190 (382)
T KOG0032|consen 177 RIKLIDFGLAKFIK 190 (382)
T ss_pred cEEEeeCCCceEcc
Confidence 79999999998655
No 40
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.3e-32 Score=311.38 Aligned_cols=153 Identities=17% Similarity=0.174 Sum_probs=135.1
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..+.|++...||.|.-++||+|+. ...+..||||++.-++.... .+.++ +|+..|+.++||||++
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c------~p~~e~VAIK~inLEkc~~~--ld~l~-------kE~~~msl~~HPNIv~ 88 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARC------IPTNEVVAIKIINLEKCNND--LDALR-------KEVQTMSLIDHPNIVT 88 (516)
T ss_pred CccceeEEEEEeccceeEeeeeee------cccCCEEEEEEeehhhhhhh--HHHHH-------HHHHHhhhcCCCCcce
Confidence 356899999999999999999885 46789999999987765443 23333 7999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
++..|..+..+|+||+||.+ ++.++++..-...+.|..+..|++++++||.|||.+|.||||||+.||||+.+| .||
T Consensus 89 ~~~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG--~Vk 166 (516)
T KOG0582|consen 89 YHCSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDG--TVK 166 (516)
T ss_pred EEEEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCC--cEE
Confidence 99999999999999999996 999999864445589999999999999999999999999999999999999999 799
Q ss_pred hcCcCCCCccc
Q 000399 319 ICDKPLVGFNS 329 (1566)
Q Consensus 319 L~DFGlA~~~~ 329 (1566)
|+|||.+....
T Consensus 167 LadFgvsa~l~ 177 (516)
T KOG0582|consen 167 LADFGVSASLF 177 (516)
T ss_pred EcCceeeeeec
Confidence 99999876433
No 41
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.97 E-value=3.8e-32 Score=318.47 Aligned_cols=148 Identities=22% Similarity=0.278 Sum_probs=126.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|+++ .++..||+|.+...... .....+. +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~-~~~~~~~--------~E~~~l~~l~h~niv~~ 68 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSK------LTENLVALKEIRLEHEE-GAPCTAI--------REVSLLKNLKHANIVTL 68 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEEC------CCCCEEEEEEecccccC-CcchhHH--------HHHHHHHhCCCCCEeeE
Confidence 568999999999999999998863 46888999998754221 1112222 69999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++++.+.+..|+||||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~--~~kl~ 145 (288)
T cd07871 69 HDIIHTERCLTLVFEYLDSDLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKG--ELKLA 145 (288)
T ss_pred EEEEcCCCeEEEEEeCCCcCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEC
Confidence 9999999999999999999999988642 33467888999999999999999999999999999999999998 79999
Q ss_pred CcCCCC
Q 000399 321 DKPLVG 326 (1566)
Q Consensus 321 DFGlA~ 326 (1566)
|||+++
T Consensus 146 DfG~~~ 151 (288)
T cd07871 146 DFGLAR 151 (288)
T ss_pred cCccee
Confidence 999986
No 42
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.97 E-value=2.6e-32 Score=320.44 Aligned_cols=149 Identities=17% Similarity=0.180 Sum_probs=127.0
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||+|.++ .++..+|+|++...........+.+. +|+.+|+.++||||++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~~l~~l~hp~iv~~~ 67 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDR------ISEHYYALKVMAIPEVIRLKQEQHVH-------NEKRVLKEVSHPFIIRLF 67 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEc------CCCCEEEEEEEEHHHHhhhHHHHHHH-------HHHHHHHhCCCCcHhhhH
Confidence 36899999999999999998863 46889999998754322211122222 699999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+.+.+|+||||+++ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~--~~kl~ 143 (291)
T cd05612 68 WTEHDQRFLYMLMEYVPGGELFSYLRN--SGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEG--HIKLT 143 (291)
T ss_pred hhhccCCeEEEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEEE
Confidence 999999999999999986 99999973 44578889999999999999999999999999999999999988 79999
Q ss_pred CcCCCCc
Q 000399 321 DKPLVGF 327 (1566)
Q Consensus 321 DFGlA~~ 327 (1566)
|||+++.
T Consensus 144 Dfg~~~~ 150 (291)
T cd05612 144 DFGFAKK 150 (291)
T ss_pred ecCcchh
Confidence 9998863
No 43
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.97 E-value=3.7e-32 Score=325.09 Aligned_cols=148 Identities=16% Similarity=0.140 Sum_probs=128.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|+++ .++..+|+|++.+....... ...+. +|+.+|+.++||||++
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~iv~ 82 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHK------GTGEYYAIKCLKKREILKMKQVQHVA--------QEKSILMELSHPFIVN 82 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhhHHHHH--------HHHHHHHhCCCCCCCc
Confidence 568999999999999999998863 46889999998765332221 22233 6999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++++.+++.+|+||||+++ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 83 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~--~~k 158 (329)
T PTZ00263 83 MMCSFQDENRVYFLLEFVVGGELFTHLRK--AGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKG--HVK 158 (329)
T ss_pred EEEEEEcCCEEEEEEcCCCCChHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCC--CEE
Confidence 99999999999999999986 99999973 44578889999999999999999999999999999999999998 799
Q ss_pred hcCcCCCC
Q 000399 319 ICDKPLVG 326 (1566)
Q Consensus 319 L~DFGlA~ 326 (1566)
|+|||+++
T Consensus 159 l~Dfg~~~ 166 (329)
T PTZ00263 159 VTDFGFAK 166 (329)
T ss_pred EeeccCce
Confidence 99999886
No 44
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.97 E-value=4.5e-32 Score=323.45 Aligned_cols=141 Identities=21% Similarity=0.208 Sum_probs=121.7
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCcccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~ 246 (1566)
+.||+|+||.||+|+++ .++..+|+|++.+...... ....++ +|+.+|+.++||||+++++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~hp~i~~~~~~~~~ 66 (323)
T cd05571 1 KLLGKGTFGKVILVREK------ATGKYYAMKILKKEVIIAKDEVAHTL--------TESRVLQNTRHPFLTALKYSFQT 66 (323)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhHHHHHHH--------HHHHHHHhCCCCCCCCEEEEEEc
Confidence 46999999999998863 5788999999886433222 222233 59999999999999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
.+.+|+||||+++ +|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~--~~kl~DfG~a 142 (323)
T cd05571 67 HDRLCFVMEYANGGELFFHLS--RERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDG--HIKITDFGLC 142 (323)
T ss_pred CCEEEEEEeCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC--CEEEeeCCCC
Confidence 9999999999997 9999887 345678999999999999999999999999999999999999988 7999999998
Q ss_pred C
Q 000399 326 G 326 (1566)
Q Consensus 326 ~ 326 (1566)
+
T Consensus 143 ~ 143 (323)
T cd05571 143 K 143 (323)
T ss_pred c
Confidence 6
No 45
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-32 Score=317.45 Aligned_cols=170 Identities=15% Similarity=0.187 Sum_probs=140.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
..|+.++.||+|+||.||+|.+. .+++.||+|++.-+.... ..+-++ +|+.+|.++++|||.++|
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~------~t~k~vAiKii~Le~~~d--eIediq-------qei~~Ls~~~~~~it~yy 77 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDN------KTKKVVAIKIIDLEEAED--EIEDIQ-------QEISVLSQCDSPNITEYY 77 (467)
T ss_pred cccccchhccccccceeeeeeec------cccceEEEEEechhhcch--hhHHHH-------HHHHHHHhcCcchHHhhh
Confidence 36888899999999999999974 689999999998754322 222222 699999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.|..+..++++||||.| ++.+.++ ....+.+..+..++++++.|+.|||.++.+|||||+.|||+..+| .+|++
T Consensus 78 gsyl~g~~LwiiMey~~gGsv~~lL~--~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g--~vkl~ 153 (467)
T KOG0201|consen 78 GSYLKGTKLWIIMEYCGGGSVLDLLK--SGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESG--DVKLA 153 (467)
T ss_pred hheeecccHHHHHHHhcCcchhhhhc--cCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccC--cEEEE
Confidence 999999999999999997 9999998 344558889999999999999999999999999999999999998 69999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 361 (1566)
|||++.+...... ...+++|||+|||||++
T Consensus 154 DfgVa~ql~~~~~-----------rr~tfvGTPfwMAPEVI 183 (467)
T KOG0201|consen 154 DFGVAGQLTNTVK-----------RRKTFVGTPFWMAPEVI 183 (467)
T ss_pred ecceeeeeechhh-----------ccccccccccccchhhh
Confidence 9999986542111 11234577777777664
No 46
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-29 Score=314.97 Aligned_cols=145 Identities=18% Similarity=0.279 Sum_probs=119.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|...+.||++.|=+|.+|++ .+|. ++||+.-+... .-....|.+++ +|++ ...++|||++++.-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~-------~eG~-vVvKVFvk~~p-~~sL~~~~qrL-----~~ik-~~l~~~pn~lPfqk 88 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKD-------REGL-VVVKVFVKQDP-TISLRPFKQRL-----EEIK-FALMKAPNCLPFQK 88 (1431)
T ss_pred ceeeecccCchhhhhhhhccC-------CCce-EEEEEEeccCC-CCCchHHHHHH-----HHHH-HHhhcCCcccchHH
Confidence 677889999999999999997 3555 88999876531 12223333322 4666 56678999999999
Q ss_pred cccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
+..++...|||=+|...+|+|.|.. +..+..-+.+.|+.|++.||.-||..||+|+|||.+||||+.-+| +.|+||
T Consensus 89 ~~~t~kAAylvRqyvkhnLyDRlST--RPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW--~~LtDF 164 (1431)
T KOG1240|consen 89 VLVTDKAAYLVRQYVKHNLYDRLST--RPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNW--LYLTDF 164 (1431)
T ss_pred HHHhhHHHHHHHHHHhhhhhhhhcc--chHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeech--hhhhcc
Confidence 9999999999999999999999984 344677888999999999999999999999999999999999885 999999
Q ss_pred CCCC
Q 000399 323 PLVG 326 (1566)
Q Consensus 323 GlA~ 326 (1566)
.--|
T Consensus 165 AsFK 168 (1431)
T KOG1240|consen 165 ASFK 168 (1431)
T ss_pred cccC
Confidence 7554
No 47
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.97 E-value=1.2e-31 Score=320.68 Aligned_cols=147 Identities=23% Similarity=0.336 Sum_probs=124.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|+++ .++..||||.+...........+++ +|+.+|+.++||||+++++
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~hpniv~~~~ 66 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDT------HTGEKVAIKKINDVFEHVSDATRIL--------REIKLLRLLRHPDIVEIKH 66 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEEC------CCCCEEEEEEechhhccchhHHHHH--------HHHHHHHhCCCCCEeeecc
Confidence 5899999999999999998863 5788999999875322222223333 5999999999999999999
Q ss_pred ccccc-----CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 243 LLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 243 ~~~~~-----~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++... ..+|+||||++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~--~~ 142 (338)
T cd07859 67 IMLPPSRREFKDIYVVFELMESDLHQVIKA--NDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADC--KL 142 (338)
T ss_pred eEeccCCCCCceEEEEEecCCCCHHHHHHh--cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--cE
Confidence 88543 25899999999999999873 34578899999999999999999999999999999999999998 79
Q ss_pred hhcCcCCCCc
Q 000399 318 YICDKPLVGF 327 (1566)
Q Consensus 318 KL~DFGlA~~ 327 (1566)
||+|||+++.
T Consensus 143 kL~Dfg~~~~ 152 (338)
T cd07859 143 KICDFGLARV 152 (338)
T ss_pred EEccCccccc
Confidence 9999999873
No 48
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.6e-31 Score=311.11 Aligned_cols=171 Identities=18% Similarity=0.185 Sum_probs=143.3
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.+.|+++..||.|+||.||+|.++ +++...|.|++.. .+.+....++. ||+||..++||+||+|
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nk------et~~lAAaKvIet--kseEELEDylV--------EIeILa~CdHP~ivkL 94 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNK------ETKLLAAAKVIET--KSEEELEDYLV--------EIEILAECDHPVIVKL 94 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcc------cchhhhhhhhhcc--cchhHHhhhhh--------hhhhhhcCCChHHHHH
Confidence 456899999999999999999974 6788888998765 34455566664 9999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.|...+.++|+.|||+| -+..++-.. ...+.+..++.+++|++.||.|||+++|||||||..|||++-+| .++|
T Consensus 95 l~ayy~enkLwiliEFC~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldG--dirL 171 (1187)
T KOG0579|consen 95 LSAYYFENKLWILIEFCGGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDG--DIRL 171 (1187)
T ss_pred HHHHhccCceEEEEeecCCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecC--cEee
Confidence 9999999999999999997 777666532 34589999999999999999999999999999999999999999 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 361 (1566)
+|||++..+..... ....++|||+|||||+.
T Consensus 172 ADFGVSAKn~~t~q-----------kRDsFIGTPYWMAPEVv 202 (1187)
T KOG0579|consen 172 ADFGVSAKNKSTRQ-----------KRDSFIGTPYWMAPEVV 202 (1187)
T ss_pred ecccccccchhHHh-----------hhccccCCcccccchhe
Confidence 99999875442111 12346799999999874
No 49
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.97 E-value=7.1e-32 Score=335.03 Aligned_cols=146 Identities=21% Similarity=0.252 Sum_probs=120.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++++.||+|+||.||+|.+. .++..||||.+..... ... +|+.+|+.++|||||++
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~------~~~~~vAiK~i~~~~~-------~~~-------~Ei~il~~l~h~niv~l 124 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICI------DTSEKVAIKKVLQDPQ-------YKN-------RELLIMKNLNHINIIFL 124 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEEC------CCCCEEEEEEEecCcc-------hHH-------HHHHHHHhcCCCCCcce
Confidence 357999999999999999998853 4678899998864321 122 58999999999999999
Q ss_pred ccccccc--------CceeeeccCCccchhhhhcc--CcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccc
Q 000399 241 LGLLKTS--------GLITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310 (1566)
Q Consensus 241 ~~~~~~~--------~~l~LV~E~~~gsL~~~l~~--~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~ 310 (1566)
++++... ..+++||||++++|.+++.. .....+++..++.++.||+.||.|||++||+||||||+|||++
T Consensus 125 ~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~ 204 (440)
T PTZ00036 125 KDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLID 204 (440)
T ss_pred eeeEeecccccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEc
Confidence 9887432 25779999999988887753 2334578889999999999999999999999999999999998
Q ss_pred ccchhhhhhcCcCCCCc
Q 000399 311 DSCWSWLYICDKPLVGF 327 (1566)
Q Consensus 311 ~~~~~~vKL~DFGlA~~ 327 (1566)
.++. .+||+|||+|+.
T Consensus 205 ~~~~-~vkL~DFGla~~ 220 (440)
T PTZ00036 205 PNTH-TLKLCDFGSAKN 220 (440)
T ss_pred CCCC-ceeeeccccchh
Confidence 6652 599999999873
No 50
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=4.5e-31 Score=309.36 Aligned_cols=172 Identities=19% Similarity=0.227 Sum_probs=144.0
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~l~ 241 (1566)
.|+++++||+||-+.||++.. .+...+|+|.+.....+.+...-|.+ |+..|.+|+ |-+||+||
T Consensus 362 ~Yeilk~iG~GGSSkV~kV~~-------s~~~iyalkkv~~~~~D~qtl~gy~n--------EI~lL~KLkg~~~IIqL~ 426 (677)
T KOG0596|consen 362 EYEILKQIGSGGSSKVFKVLN-------SDKQIYALKKVVLLEADNQTLDGYRN--------EIALLNKLKGHDKIIQLY 426 (677)
T ss_pred hhhHHHhhcCCCcceeeeeec-------CCCcchhhhHHHHhhcCHHHHHHHHH--------HHHHHHHhcCCceEEEEe
Confidence 699999999999999999884 56788899888766666666666664 999999995 99999999
Q ss_pred ccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
+|-.+++.+||||||-+.+|..+|+. +....+.+.+++|.+|++.|+.++|..||||.||||.|+|+-.+. +||+|
T Consensus 427 DYEv~d~~lYmvmE~Gd~DL~kiL~k-~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVkG~---LKLID 502 (677)
T KOG0596|consen 427 DYEVTDGYLYMVMECGDIDLNKILKK-KKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVKGR---LKLID 502 (677)
T ss_pred eeeccCceEEEEeecccccHHHHHHh-ccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEeee---EEeee
Confidence 99999999999999999999999984 333456689999999999999999999999999999999999876 99999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCccccccccccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~ 362 (1566)
||+|...... + +......-+||+-||+||.+.
T Consensus 503 FGIA~aI~~D----T-----TsI~kdsQvGT~NYMsPEAl~ 534 (677)
T KOG0596|consen 503 FGIANAIQPD----T-----TSIVKDSQVGTVNYMSPEALT 534 (677)
T ss_pred echhcccCcc----c-----cceeeccccCcccccCHHHHh
Confidence 9999976531 1 111223345888899988763
No 51
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.96 E-value=4.4e-31 Score=313.36 Aligned_cols=140 Identities=21% Similarity=0.248 Sum_probs=120.3
Q ss_pred eeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcccCCCcccccccccccC
Q 000399 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1566)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~ 248 (1566)
||+|+||.||+|++. .++..+|+|++.+..... .....+. +|+.+|+.++||||+++++++...+
T Consensus 1 lg~G~~g~Vy~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~~~~~~~ 66 (312)
T cd05585 1 IGKGSFGKVMQVRKR------DTQRIYALKTIRKAHIVSRSEVTHTL--------AERTVLAQVNCPFIVPLKFSFQSPE 66 (312)
T ss_pred CCcCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCcEeceeeEEecCC
Confidence 799999999998863 568889999987643222 2222333 5999999999999999999999999
Q ss_pred ceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCc
Q 000399 249 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1566)
Q Consensus 249 ~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~ 327 (1566)
.+|+||||+++ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.
T Consensus 67 ~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~--~~kl~Dfg~~~~ 142 (312)
T cd05585 67 KLYLVLAFINGGELFHHLQR--EGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQG--HIALCDFGLCKL 142 (312)
T ss_pred eEEEEEcCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCC--cEEEEECccccc
Confidence 99999999997 99999973 44578999999999999999999999999999999999999988 799999999873
No 52
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.96 E-value=5.8e-31 Score=314.71 Aligned_cols=141 Identities=22% Similarity=0.192 Sum_probs=121.4
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcccCCCcccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~ 246 (1566)
+.||+|+||.||+++++ .++..+|+|++.+..... .....++ +|+.+|+.++||||+++++++..
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~iv~~~~~~~~ 66 (328)
T cd05593 1 KLLGKGTFGKVILVREK------ASGKYYAMKILKKEVIIAKDEVAHTL--------TESRVLKNTRHPFLTSLKYSFQT 66 (328)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCCCcceEEEEEc
Confidence 46999999999998863 578899999998653322 2222333 59999999999999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
.+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~~~lv~Ey~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~--~~kL~DfG~~ 142 (328)
T cd05593 67 KDRLCFVMEYVNGGELFFHLSR--ERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDG--HIKITDFGLC 142 (328)
T ss_pred CCEEEEEEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCC--cEEEecCcCC
Confidence 9999999999987 99888863 44578999999999999999999999999999999999999988 7999999998
Q ss_pred C
Q 000399 326 G 326 (1566)
Q Consensus 326 ~ 326 (1566)
+
T Consensus 143 ~ 143 (328)
T cd05593 143 K 143 (328)
T ss_pred c
Confidence 6
No 53
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=1.5e-31 Score=301.18 Aligned_cols=189 Identities=17% Similarity=0.246 Sum_probs=166.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++.+.||+|+||.|-+|++. ..|+.||||.+++.++..+...-.++ |||+||..|+||||+.+
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~------~sgR~VAiKsIrKdkIkdeqDlvhIR-------REIeIMSsLNHPhII~I 118 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEH------KSGREVAIKSIRKDKIKDEQDLVHIR-------REIEIMSSLNHPHIIQI 118 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhc------cCCcEeehhhhhhhhcccHHHHHHHH-------HHHHHHhhcCCCceeeh
Confidence 458999999999999999999874 57999999999998765543333333 89999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
|++|+..+.+.|||||..+ .|++|+. ..+.+++.+++.+++||++|+.|||.++|+|||||.+|||+|.++ .+||
T Consensus 119 yEVFENkdKIvivMEYaS~GeLYDYiS--er~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~--NiKI 194 (668)
T KOG0611|consen 119 YEVFENKDKIVIVMEYASGGELYDYIS--ERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNN--NIKI 194 (668)
T ss_pred hhhhcCCceEEEEEEecCCccHHHHHH--HhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCC--Ceee
Confidence 9999999999999999986 9999998 456689999999999999999999999999999999999999999 5999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhh-cccccccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS-QFNRWWRGEL 378 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~-~~d~Ws~G~i 378 (1566)
+|||++..... ..+..+++|+|.|.+||++.+.+|.. .+|-|+.|++
T Consensus 195 ADFGLSNly~~------------~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvL 242 (668)
T KOG0611|consen 195 ADFGLSNLYAD------------KKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVL 242 (668)
T ss_pred eccchhhhhcc------------ccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHH
Confidence 99999986542 12445567999999999999999965 8999999986
No 54
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.96 E-value=8e-31 Score=318.90 Aligned_cols=146 Identities=27% Similarity=0.357 Sum_probs=124.8
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++++.||+|+||.||+|.+. .++..||+|.+..........+++. +|+.+|+.++||||+++++
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~~~~ 66 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDP------RDGKRVALKKMPNVFQNLVSCKRVF--------RELKMLCFFKHDNVLSALD 66 (372)
T ss_pred CCcccceeeeCCCEEEEEEEEC------CCCCEEEEEeccccccchHHHHHHH--------HHHHHHHhCCCCCcCCHhh
Confidence 4788999999999999998863 4788999999865322222223333 6999999999999999999
Q ss_pred cccccC-----ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 243 LLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 243 ~~~~~~-----~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++...+ .+|+||||++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~--~~ 142 (372)
T cd07853 67 ILQPPHIDPFEEIYVVTELMQSDLHKIIVS--PQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNC--VL 142 (372)
T ss_pred eecCCCccccceEEEEeeccccCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCC--CE
Confidence 998776 7999999999999888863 44578899999999999999999999999999999999999998 79
Q ss_pred hhcCcCCCC
Q 000399 318 YICDKPLVG 326 (1566)
Q Consensus 318 KL~DFGlA~ 326 (1566)
||+|||+++
T Consensus 143 kL~Dfg~a~ 151 (372)
T cd07853 143 KICDFGLAR 151 (372)
T ss_pred Eecccccee
Confidence 999999886
No 55
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.96 E-value=5.2e-30 Score=332.92 Aligned_cols=174 Identities=13% Similarity=0.129 Sum_probs=141.7
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
+++|++++.||+|+||.||+|++. .++..||||++.+.........+.+. +|+.+++.++||||+++
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~------~~~~~vAiKvi~~~~~~~~~~~~~~~-------~E~~~l~~l~hp~Iv~~ 69 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKK------NNSKLYAVKVVKKADMINKNMVHQVQ-------AERDALALSKSPFIVHL 69 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEEC------CCCcEEEEEEEehhhccCHHHHHHHH-------HHHHHHHhcCCCCcCeE
Confidence 568999999999999999998863 46889999998764433222222222 68889999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++...+.+||||||+.+ +|.+++.. .+.+++..++.++.||+.||.|||.+|||||||||+||||+.++ .+||
T Consensus 70 ~~~~~~~~~~~lVmEy~~g~~L~~li~~--~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g--~vkL 145 (669)
T cd05610 70 YYSLQSANNVYLVMEYLIGGDVKSLLHI--YGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEG--HIKL 145 (669)
T ss_pred EEEEEECCEEEEEEeCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCC--CEEE
Confidence 9999999999999999986 99999973 34578888999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ 362 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~ 362 (1566)
+|||+++....... ......+|+.|++||...
T Consensus 146 ~DFGls~~~~~~~~-----------~~~~~~~t~~~~~pe~~~ 177 (669)
T cd05610 146 TDFGLSKVTLNREL-----------NMMDILTTPSMAKPKNDY 177 (669)
T ss_pred EeCCCCccccCCcc-----------cccccccCccccCccccc
Confidence 99999986442110 112235888999998653
No 56
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.96 E-value=1.4e-30 Score=310.35 Aligned_cols=141 Identities=19% Similarity=0.173 Sum_probs=118.9
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcc-cCCCccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l~~~~~ 245 (1566)
+.||+|+||.||+|+++ .++..||+|++.+..... .....+. +|..++..+ +||||+++++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~h~~iv~~~~~~~ 66 (320)
T cd05590 1 RVLGKGSFGKVMLARLK------ESGRLYAVKVLKKDVILQDDDVECTM--------TEKRILSLARNHPFLTQLYCCFQ 66 (320)
T ss_pred CeeeeCCCeEEEEEEEc------CCCCEEEEEEEEHHHHhhccHHHHHH--------HHHHHHHhccCCCchhceeeEEE
Confidence 47999999999998863 568899999987653222 1222223 477777766 6999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
+.+.+|+||||+++ +|.+++.. ...+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~iv~Ey~~~g~L~~~i~~--~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~--~~kL~DfG~ 142 (320)
T cd05590 67 TPDRLFFVMEFVNGGDLMFHIQK--SRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEG--HCKLADFGM 142 (320)
T ss_pred cCCEEEEEEcCCCCchHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--cEEEeeCCC
Confidence 99999999999997 99998873 34578999999999999999999999999999999999999998 799999999
Q ss_pred CC
Q 000399 325 VG 326 (1566)
Q Consensus 325 A~ 326 (1566)
++
T Consensus 143 ~~ 144 (320)
T cd05590 143 CK 144 (320)
T ss_pred Ce
Confidence 76
No 57
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.96 E-value=2.1e-30 Score=309.06 Aligned_cols=145 Identities=17% Similarity=0.220 Sum_probs=121.5
Q ss_pred ceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc--ccccchhhhcCCCCCCCCCCCCcccCCCcccccccc
Q 000399 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 244 (1566)
Q Consensus 167 ~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~--~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~ 244 (1566)
++.||+|+||.||++++. .....+..+|+|++.+..... .....+. +|+.+|+.++||||+++++++
T Consensus 1 ~~~lg~G~~g~V~~~~~~---~~~~~~~~~avK~~~~~~~~~~~~~~~~~~--------~E~~il~~l~hp~iv~~~~~~ 69 (323)
T cd05584 1 LKVLGKGGYGKVFQVRKV---TGADTGKIFAMKVLKKATIVRNQKDTAHTK--------AERNILEAVKHPFIVDLIYAF 69 (323)
T ss_pred CceeeecCCeEEEEEEEc---ccCCCCCEEEEEEEEHHHHHhhhhhHHHHH--------HHHHHHHhCCCCchhceeeEE
Confidence 468999999999988742 122568899999988643221 1111222 589999999999999999999
Q ss_pred cccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcC
Q 000399 245 KTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1566)
Q Consensus 245 ~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFG 323 (1566)
.+++.+|+||||+++ +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||
T Consensus 70 ~~~~~~~lv~e~~~~~~L~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~kl~Dfg 145 (323)
T cd05584 70 QTGGKLYLILEYLSGGELFMHLE--REGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQG--HVKLTDFG 145 (323)
T ss_pred ecCCeEEEEEeCCCCchHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--CEEEeeCc
Confidence 999999999999997 9999987 345578888999999999999999999999999999999999998 79999999
Q ss_pred CCC
Q 000399 324 LVG 326 (1566)
Q Consensus 324 lA~ 326 (1566)
+++
T Consensus 146 ~~~ 148 (323)
T cd05584 146 LCK 148 (323)
T ss_pred CCe
Confidence 886
No 58
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=9.6e-31 Score=309.47 Aligned_cols=164 Identities=23% Similarity=0.294 Sum_probs=135.1
Q ss_pred eeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccccC
Q 000399 169 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1566)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~ 248 (1566)
.||+|+||+||-|++. .+...+|||.+.... .+... +...||.+-+.|+|.|||+++|.+..++
T Consensus 582 VLGKGTYG~VYA~RD~------~tqvrIaIKEIpekd--sr~~Q--------PLhEEIaLH~~LrHkNIVrYLGs~senG 645 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDM------DTQVRIAIKEIPEKD--SREVQ--------PLHEEIALHSTLRHKNIVRYLGSVSENG 645 (1226)
T ss_pred EeecCceeEEEeeccc------cceeEEEeeeccccc--chhhc--------cHHHHHHHHHHHhhHhHHHHhhccCCCC
Confidence 6999999999999974 678889999987532 12111 2336999999999999999999999999
Q ss_pred ceeeeccCCcc-chhhhhccCccccc--chhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 249 LITSVIPKTPY-TLENILQFSPNALK--SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 249 ~l~LV~E~~~g-sL~~~l~~~~~~~l--~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
.+-|.||-++| +|.++|+ ++-+++ .+..+.+|.+||++||+|||++.|||||||-+|+|++.-. ..+||+|||.+
T Consensus 646 f~kIFMEqVPGGSLSsLLr-skWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTyS-GvlKISDFGTs 723 (1226)
T KOG4279|consen 646 FFKIFMEQVPGGSLSSLLR-SKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYS-GVLKISDFGTS 723 (1226)
T ss_pred eEEEEeecCCCCcHHHHHH-hccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeecc-ceEEecccccc
Confidence 99999999997 9999998 456676 7888899999999999999999999999999999998643 27999999999
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccc
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 361 (1566)
+...+. . -+.+++.||.-|||||++
T Consensus 724 KRLAgi-------n----P~TETFTGTLQYMAPEvI 748 (1226)
T KOG4279|consen 724 KRLAGI-------N----PCTETFTGTLQYMAPEVI 748 (1226)
T ss_pred hhhccC-------C----ccccccccchhhhChHhh
Confidence 865532 1 134456688888888775
No 59
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=99.96 E-value=4.1e-30 Score=291.64 Aligned_cols=211 Identities=19% Similarity=0.305 Sum_probs=193.1
Q ss_pred cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCc--ceEEEeeccCCCcccceeeEEeccccc
Q 000399 1289 PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQD--ECTVFTAGIGPGFKGTVQKWELTRINC 1365 (1566)
Q Consensus 1289 fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd--~~~LaSgS~~~~~D~tVrlWDl~tg~~ 1365 (1566)
||.|+.. |+|||++|.+++|+..+. .+++++||++.|.++.|+|. +..++||+. ||+|++|++.+...
T Consensus 183 fS~ds~~-----laT~swsG~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~----Dgtvklw~~~~e~~ 253 (459)
T KOG0272|consen 183 FSRDSKH-----LATGSWSGLVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASA----DGTVKLWKLSQETP 253 (459)
T ss_pred eecCCCe-----EEEeecCCceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeecc----CCceeeeccCCCcc
Confidence 8999998 999999999999998864 88999999999999999996 568999998 99999999999999
Q ss_pred ccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccc
Q 000399 1366 VSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLS 1443 (1566)
Q Consensus 1366 i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1443 (1566)
+..++||...|..|+|+|+|++|+|+ |.+-++||+++++.+....+| +
T Consensus 254 l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~ElL~QEGH------------------------------s 303 (459)
T KOG0272|consen 254 LQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSELLLQEGH------------------------------S 303 (459)
T ss_pred hhhhhcchhhheeeeecCCCceeeecccccchhhcccccchhhHhhccc------------------------------c
Confidence 99999999999999999999999876 999999999999887655554 6
Q ss_pred cccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccc
Q 000399 1444 SGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVAS 1523 (1566)
Q Consensus 1444 ~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spd 1523 (1566)
.+|.+++|+++ |..++|||.|..-||||+|+|+++..+.+|.. .|.+|+| +|+
T Consensus 304 ~~v~~iaf~~D----------GSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k------~I~~V~f-----------sPN 356 (459)
T KOG0272|consen 304 KGVFSIAFQPD----------GSLAATGGLDSLGRVWDLRTGRCIMFLAGHIK------EILSVAF-----------SPN 356 (459)
T ss_pred cccceeEecCC----------CceeeccCccchhheeecccCcEEEEeccccc------ceeeEeE-----------CCC
Confidence 77999999987 99999999999999999999999999998844 4455554 577
Q ss_pred hhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeecc
Q 000399 1524 PSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1524 g~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafspd 1565 (1566)
|..|||||.|++++|||++..+.++++.+|.+-|+.|+|+|+
T Consensus 357 Gy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~ 398 (459)
T KOG0272|consen 357 GYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQ 398 (459)
T ss_pred ceEEeecCCCCcEEEeeecccccceecccccchhhheEeccc
Confidence 789999999999999999999999999999999999999984
No 60
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.96 E-value=2.2e-30 Score=311.31 Aligned_cols=150 Identities=25% Similarity=0.298 Sum_probs=125.8
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
.+.++|++++.||+|+||.||+|.+. .++..||+|.+............+. +|+.+|+.++||||+
T Consensus 12 ~~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv 77 (343)
T cd07878 12 EVPERYQNLTPVGSGAYGSVCSAYDT------RLRQKVAVKKLSRPFQSLIHARRTY--------RELRLLKHMKHENVI 77 (343)
T ss_pred hhhhhhhhheecccCCCeEEEEEEEC------CCCCEEEEEEeCchhhhhHHHHHHH--------HHHHHHHhcCCCchh
Confidence 44678999999999999999998763 4678899999875432222222333 599999999999999
Q ss_pred ccccccccc------CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 239 PVLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 239 ~l~~~~~~~------~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
++++++... ...|++||+++++|.++++ ...+++..++.++.||+.||.|||++||+||||||+|||++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~ 154 (343)
T cd07878 78 GLLDVFTPATSIENFNEVYLVTNLMGADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNED 154 (343)
T ss_pred hhhhhhcccccccccCcEEEEeecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCC
Confidence 999988643 3579999999889998886 3357899999999999999999999999999999999999999
Q ss_pred chhhhhhcCcCCCCc
Q 000399 313 CWSWLYICDKPLVGF 327 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~ 327 (1566)
+ .+||+|||+++.
T Consensus 155 ~--~~kl~Dfg~~~~ 167 (343)
T cd07878 155 C--ELRILDFGLARQ 167 (343)
T ss_pred C--CEEEcCCcccee
Confidence 8 799999999863
No 61
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.96 E-value=3.8e-30 Score=304.57 Aligned_cols=148 Identities=21% Similarity=0.269 Sum_probs=126.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|+++ .++..+|+|.+...... .....+. +|+.+++.++||||+++
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~-~~~~~~~--------~E~~~l~~l~h~~iv~~ 69 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSK------LTENLVALKEIRLEHEE-GAPCTAI--------REVSLLKDLKHANIVTL 69 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEec------CCCCeEEEEEeeccccC-CcchhHH--------HHHHHHHhCCCCCcceE
Confidence 568999999999999999998863 46788999998754322 1112222 59999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++++..++..|+||||++++|.+++... ...++...++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 70 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~--~~kl~ 146 (309)
T cd07872 70 HDIVHTDKSLTLVFEYLDKDLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERG--ELKLA 146 (309)
T ss_pred EEEEeeCCeEEEEEeCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEC
Confidence 9999999999999999999998888643 33467888999999999999999999999999999999999988 79999
Q ss_pred CcCCCC
Q 000399 321 DKPLVG 326 (1566)
Q Consensus 321 DFGlA~ 326 (1566)
|||+++
T Consensus 147 Dfg~~~ 152 (309)
T cd07872 147 DFGLAR 152 (309)
T ss_pred ccccce
Confidence 999886
No 62
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.6e-30 Score=277.48 Aligned_cols=203 Identities=19% Similarity=0.187 Sum_probs=177.5
Q ss_pred hhhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCC
Q 000399 157 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 236 (1566)
Q Consensus 157 ~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpN 236 (1566)
.....++|++.+.||+|-||.||+|+.+ +++.+||+|++.+.+.........++ ||++|-..|+|||
T Consensus 17 ~~~~l~dfeigr~LgkgkFG~vYlarek------ks~~IvalKVlfKsqi~~~~v~~qlr-------REiEIqs~L~hpn 83 (281)
T KOG0580|consen 17 KTWTLDDFEIGRPLGKGKFGNVYLAREK------KSLFIVALKVLFKSQILKTQVEHQLR-------REIEIQSHLRHPN 83 (281)
T ss_pred cccchhhccccccccCCccccEeEeeec------cCCcEEEEeeeeHHHHHHhcchhhhh-------heeEeecccCCcc
Confidence 3455789999999999999999999864 68999999999998877766666666 8999999999999
Q ss_pred cccccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 237 IV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
|+++|++|.++..+||++||.+. +|...|+..+...+++..+..|++|++.||.|||.++||||||||+|+|++..+
T Consensus 84 ilrlY~~fhd~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~-- 161 (281)
T KOG0580|consen 84 ILRLYGYFHDSKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAG-- 161 (281)
T ss_pred HHhhhhheeccceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCC--
Confidence 99999999999999999999985 999999977777899999999999999999999999999999999999999999
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
.+||+|||-+-.... ..+ .+.+||..|.+||+..+..++..+|.|+.|++ .++.+-|.+
T Consensus 162 ~lkiAdfGwsV~~p~--------~kR-----~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl-------~yeflvg~p 220 (281)
T KOG0580|consen 162 ELKIADFGWSVHAPS--------NKR-----KTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVL-------CYEFLVGLP 220 (281)
T ss_pred CeeccCCCceeecCC--------CCc-----eeeecccccCCHhhcCCCCccchhhHHHHHHH-------HHHHHhcCC
Confidence 799999999875431 111 12349999999999999999999999999987 555555544
No 63
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.96 E-value=3.3e-30 Score=282.99 Aligned_cols=150 Identities=19% Similarity=0.159 Sum_probs=125.5
Q ss_pred hhhhhccccc-ceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cC
Q 000399 157 CSRIMTALFP-IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RH 234 (1566)
Q Consensus 157 ~~~~~~~y~~-~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~H 234 (1566)
...+.++|.+ -++||-|-.|.|..|.++ .++..+|+|++..... +.||+++--.. .|
T Consensus 56 ~~~itedY~is~qvLG~GinGkV~~C~~k------~T~ekfALKvL~Ds~K---------------ARrEVeLHw~~s~h 114 (400)
T KOG0604|consen 56 EYSITEDYSISWQVLGAGINGKVVQCVHK------RTQEKFALKVLLDSPK---------------ARREVELHWMASGH 114 (400)
T ss_pred cccchhhheehhhhhccccCCceEEEEec------cchhhhHHHHHhcCHH---------------HHhHhhhhhhhcCC
Confidence 3445678887 678999999999988874 5889999999875321 12577754333 69
Q ss_pred CCcccccccccc----cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccc
Q 000399 235 PNVAPVLGLLKT----SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1566)
Q Consensus 235 pNIV~l~~~~~~----~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl 309 (1566)
||||.++++|+. ...+.+|||.|+| +|++.|.....+.++|.++..|++||+.|+.|||+.+|.||||||+|+|.
T Consensus 115 ~~iV~IidVyeNs~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLy 194 (400)
T KOG0604|consen 115 PHIVSIIDVYENSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLY 194 (400)
T ss_pred CceEEeehhhhhhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheee
Confidence 999999999864 3578999999997 99999997777889999999999999999999999999999999999999
Q ss_pred cccch-hhhhhcCcCCCCc
Q 000399 310 TDSCW-SWLYICDKPLVGF 327 (1566)
Q Consensus 310 ~~~~~-~~vKL~DFGlA~~ 327 (1566)
+.... ..+||+|||+|+.
T Consensus 195 t~t~~na~lKLtDfGFAK~ 213 (400)
T KOG0604|consen 195 TTTSPNAPLKLTDFGFAKE 213 (400)
T ss_pred ecCCCCcceEecccccccc
Confidence 86543 3799999999984
No 64
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.96 E-value=4.1e-30 Score=305.76 Aligned_cols=141 Identities=16% Similarity=0.118 Sum_probs=118.0
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCc-ccCCCccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGC-LRHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~-l~HpNIV~l~~~~~ 245 (1566)
+.||+|+||.||+|+++ .++..+|+|.+.+...... ...... +|..++.. ++||||+++++++.
T Consensus 1 ~~lg~G~~g~V~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~~~~~~ 66 (316)
T cd05620 1 KVLGKGSFGKVLLAELK------GKGEYFAVKALKKDVVLIDDDVECTM--------VEKRVLALAWENPFLTHLYCTFQ 66 (316)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhcchHHHHH--------HHHHHHHhccCCCCccCeeEEEE
Confidence 47999999999998863 4688999999986532211 112222 46677765 48999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
+.+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~--~~kl~Dfg~ 142 (316)
T cd05620 67 TKEHLFFVMEFLNGGDLMFHIQD--KGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDG--HIKIADFGM 142 (316)
T ss_pred eCCEEEEEECCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEeCccCC
Confidence 99999999999997 99988873 44578889999999999999999999999999999999999998 799999998
Q ss_pred CC
Q 000399 325 VG 326 (1566)
Q Consensus 325 A~ 326 (1566)
++
T Consensus 143 ~~ 144 (316)
T cd05620 143 CK 144 (316)
T ss_pred Ce
Confidence 76
No 65
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.95 E-value=7e-30 Score=307.21 Aligned_cols=184 Identities=21% Similarity=0.200 Sum_probs=150.0
Q ss_pred eeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCccccccccccc
Q 000399 169 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVLGLLKTS 247 (1566)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~l~~~~~~~ 247 (1566)
.+|+|+||.|++++. .+....+..+|+|++++......... .. ..|..++..++ ||.+|+++.+|+++
T Consensus 1 vlg~g~~gkvfLvrk---~~g~da~~~yamkvl~k~t~~~~~~~-~t-------~~er~il~~~~~~~f~v~lhyafqt~ 69 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRK---AGGADAGHLYAMKVLKKATLKVRDRT-HT-------KQERIILAFVHNTPFLVKLHYAFQTD 69 (612)
T ss_pred CCCcCCCcchHHHHH---hccccccchhhhhccccccccccccc-cc-------ccHHHHHhhccCCCceeeeeeeeccc
Confidence 379999999999884 23346788999999987644333222 22 26888888887 99999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCC
Q 000399 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~ 326 (1566)
..++++++|..| +|...+. ....+.+...+++...++-|++++|+.+|+|||+|++||+++.+| ++|+.|||+++
T Consensus 70 ~kl~l~ld~~rgg~lft~l~--~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~G--hi~~tdfglsk 145 (612)
T KOG0603|consen 70 GKLYLILDFLRGGDLFTRLS--KEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEG--HIKLTDFGLSK 145 (612)
T ss_pred cchhHhhhhcccchhhhccc--cCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccC--ccccCCchhhh
Confidence 999999999997 8888877 344578889999999999999999999999999999999999999 89999999999
Q ss_pred ccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhh
Q 000399 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 385 (1566)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~ 385 (1566)
..... ... +||..|||||++. ......|+|+.|.+ +|+.+.
T Consensus 146 e~v~~---------~~~------cgt~eymApEI~~--gh~~a~D~ws~gvl-~fellt 186 (612)
T KOG0603|consen 146 EAVKE---------KIA------CGTYEYRAPEIIN--GHLSAADWWSFGVL-AFELLT 186 (612)
T ss_pred HhHhh---------hhc------ccchhhhhhHhhh--ccCCcccchhhhhh-HHHHhh
Confidence 64421 111 3899999999998 55778899999987 444443
No 66
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.95 E-value=8.3e-30 Score=307.76 Aligned_cols=144 Identities=22% Similarity=0.263 Sum_probs=121.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|+.++.||+|+||.||+|++. .++..||||++..... ......+. +|+++|+.++||||+++
T Consensus 73 ~~~~~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~-~~~~~~~~--------~E~~~l~~l~h~~iv~~ 137 (353)
T PLN00034 73 LSELERVNRIGSGAGGTVYKVIHR------PTGRLYALKVIYGNHE-DTVRRQIC--------REIEILRDVNHPNVVKC 137 (353)
T ss_pred HHHHhhhhhccCCCCeEEEEEEEC------CCCCEEEEEEEecCCc-HHHHHHHH--------HHHHHHHhCCCCCccee
Confidence 567999999999999999998753 4688999999865321 11122233 69999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++...+.+|+||||+++ +|.+... ..+..+..++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 138 ~~~~~~~~~~~lv~e~~~~~~L~~~~~------~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~--~~kL 209 (353)
T PLN00034 138 HDMFDHNGEIQVLLEFMDGGSLEGTHI------ADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAK--NVKI 209 (353)
T ss_pred eeEeccCCeEEEEEecCCCCccccccc------CCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC--CEEE
Confidence 9999999999999999997 7765332 45667788999999999999999999999999999999998 7999
Q ss_pred cCcCCCCc
Q 000399 320 CDKPLVGF 327 (1566)
Q Consensus 320 ~DFGlA~~ 327 (1566)
+|||+++.
T Consensus 210 ~DfG~~~~ 217 (353)
T PLN00034 210 ADFGVSRI 217 (353)
T ss_pred ccccccee
Confidence 99999874
No 67
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.95 E-value=1.1e-29 Score=302.05 Aligned_cols=141 Identities=16% Similarity=0.121 Sum_probs=117.6
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCc-ccCCCccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGC-LRHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~-l~HpNIV~l~~~~~ 245 (1566)
+.||+|+||+||+|++. .++..+|+|++.+..... ....... +|..++.. ++||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~hp~iv~~~~~~~ 66 (316)
T cd05619 1 KMLGKGSFGKVFLAELK------GTNQFFAIKALKKDVVLMDDDVECTM--------VEKRVLSLAWEHPFLTHLYCTFQ 66 (316)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhcchHHHHH--------HHHHHHHhccCCCcCcceEEEEE
Confidence 47999999999998863 467889999998653221 1112222 46667765 48999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
+.+.+|+||||+++ +|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~ey~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~--~~kl~Dfg~ 142 (316)
T cd05619 67 TKENLFFVMEYLNGGDLMFHIQS--CHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDG--HIKIADFGM 142 (316)
T ss_pred eCCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCC--CEEEccCCc
Confidence 99999999999986 99999873 34578888999999999999999999999999999999999998 799999998
Q ss_pred CC
Q 000399 325 VG 326 (1566)
Q Consensus 325 A~ 326 (1566)
++
T Consensus 143 ~~ 144 (316)
T cd05619 143 CK 144 (316)
T ss_pred ce
Confidence 86
No 68
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.95 E-value=1.1e-29 Score=302.31 Aligned_cols=141 Identities=18% Similarity=0.174 Sum_probs=119.0
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcc-cCCCccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l~~~~~ 245 (1566)
+.||+|+||.||+|+++ .++..+|+|++.+....... ...+. +|+.+++.+ +||||+++++++.
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~il~~~~~h~~i~~~~~~~~ 66 (318)
T cd05570 1 KVLGKGSFGKVLLAELK------GTDELYAVKVLKKDVILQDDDVECTM--------TEKRVLALAGKHPFLTQLHSCFQ 66 (318)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhHHHHHH--------HHHHHHHhccCCCCccceeeEEE
Confidence 47999999999998863 46788999999865332221 22222 577788777 6999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
+.+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~--~~kl~Dfg~ 142 (318)
T cd05570 67 TKDRLFFVMEYVNGGDLMFHIQR--SGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEG--HIKIADFGM 142 (318)
T ss_pred cCCEEEEEEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCC--cEEecccCC
Confidence 99999999999986 99988873 34588999999999999999999999999999999999999998 799999998
Q ss_pred CC
Q 000399 325 VG 326 (1566)
Q Consensus 325 A~ 326 (1566)
++
T Consensus 143 ~~ 144 (318)
T cd05570 143 CK 144 (318)
T ss_pred Ce
Confidence 86
No 69
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.95 E-value=4.4e-29 Score=294.25 Aligned_cols=148 Identities=20% Similarity=0.265 Sum_probs=126.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|+++ .++..||+|.+....... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~vaiK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~nI~~~ 69 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSK------LTDNLVALKEIRLEHEEG-APCTAI--------REVSLLKDLKHANIVTL 69 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEc------CCCcEEEEEEEecccccC-chhHHH--------HHHHHHHhcCCCCcceE
Confidence 568999999999999999998763 467889999987543221 111222 59999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++++...+..|+||||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+
T Consensus 70 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~--~~kl~ 146 (301)
T cd07873 70 HDIIHTEKSLTLVFEYLDKDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERG--ELKLA 146 (301)
T ss_pred EEEEecCCeEEEEEeccccCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCC--cEEEC
Confidence 9999999999999999999999988743 33478888999999999999999999999999999999999998 79999
Q ss_pred CcCCCC
Q 000399 321 DKPLVG 326 (1566)
Q Consensus 321 DFGlA~ 326 (1566)
|||+++
T Consensus 147 dfg~~~ 152 (301)
T cd07873 147 DFGLAR 152 (301)
T ss_pred cCcchh
Confidence 999886
No 70
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.95 E-value=3.8e-29 Score=291.45 Aligned_cols=148 Identities=19% Similarity=0.246 Sum_probs=126.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|++. .++..+|+|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 66 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNK------KTGQIVAMKKIRLESEEEGVPSTAI--------REISLLKELQHPNIVCLQD 66 (285)
T ss_pred CceEeeEecccCceEEEEEEEC------CCCcEEEEEEeccccccCCchHHHH--------HHHHHHHhcCCCCEeeeEE
Confidence 4889999999999999998853 4688899999865432222222233 5999999999999999999
Q ss_pred cccccCceeeeccCCccchhhhhccCcc-cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPYTLENILQFSPN-ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~gsL~~~l~~~~~-~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++..++.+|+||||++++|.+++...+. ..+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~--~~~l~d 144 (285)
T cd07861 67 VLMQESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKG--VIKLAD 144 (285)
T ss_pred EEeeCCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCC--cEEECc
Confidence 9999999999999999999888865332 5678999999999999999999999999999999999999998 799999
Q ss_pred cCCCC
Q 000399 322 KPLVG 326 (1566)
Q Consensus 322 FGlA~ 326 (1566)
||+++
T Consensus 145 fg~~~ 149 (285)
T cd07861 145 FGLAR 149 (285)
T ss_pred cccee
Confidence 99876
No 71
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=99.95 E-value=3.5e-28 Score=264.11 Aligned_cols=229 Identities=19% Similarity=0.281 Sum_probs=196.2
Q ss_pred hccccCCCceeccCCCCCCCCCcccccccCccCCCCceEeee------eehhhhhccCcceeeeecCcceEEEeeccCCC
Q 000399 1277 SNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKAS------ILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1350 (1566)
Q Consensus 1277 ~~~~~H~~~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~------~l~tl~gH~~~V~slafspd~~~LaSgS~~~~ 1350 (1566)
.+...|.+||....-.. .+++.+.+++.|+++.+|++... .++.++||+..|..++.++||++.+|+|.
T Consensus 9 ~tl~gh~d~Vt~la~~~--~~~~~l~sasrDk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~sw--- 83 (315)
T KOG0279|consen 9 GTLEGHTDWVTALAIKI--KNSDILVSASRDKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALSASW--- 83 (315)
T ss_pred eeecCCCceEEEEEeec--CCCceEEEcccceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEeccc---
Confidence 34567999998842211 12455999999999999998742 67889999999999999999999999998
Q ss_pred cccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccc
Q 000399 1351 FKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK 1428 (1566)
Q Consensus 1351 ~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~ 1428 (1566)
|+++++||+.+|++.+.|.||...|.+++|+++.++++|| |.+|++||+. |.|..++....
T Consensus 84 -D~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~-g~ck~t~~~~~--------------- 146 (315)
T KOG0279|consen 84 -DGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTL-GVCKYTIHEDS--------------- 146 (315)
T ss_pred -cceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeec-ccEEEEEecCC---------------
Confidence 9999999999999999999999999999999999999998 9999999997 55555554321
Q ss_pred cccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhh
Q 000399 1429 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAIC 1508 (1566)
Q Consensus 1429 ~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~ 1508 (1566)
+...|.++.|+|+ ++..+++++|.|++|++||+++.+..+.+-+| ++.|+.++
T Consensus 147 -------------~~~WVscvrfsP~--------~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh------~~~v~t~~ 199 (315)
T KOG0279|consen 147 -------------HREWVSCVRFSPN--------ESNPIIVSASWDKTVKVWNLRNCQLRTTFIGH------SGYVNTVT 199 (315)
T ss_pred -------------CcCcEEEEEEcCC--------CCCcEEEEccCCceEEEEccCCcchhhccccc------cccEEEEE
Confidence 2567899999998 45789999999999999999999988888776 55566665
Q ss_pred ccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1509 ACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1509 ~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
+ ||||..+++|+.||.+.+||++.++.++++. |...|.+++|+|++
T Consensus 200 v-----------SpDGslcasGgkdg~~~LwdL~~~k~lysl~-a~~~v~sl~fspnr 245 (315)
T KOG0279|consen 200 V-----------SPDGSLCASGGKDGEAMLWDLNEGKNLYSLE-AFDIVNSLCFSPNR 245 (315)
T ss_pred E-----------CCCCCEEecCCCCceEEEEEccCCceeEecc-CCCeEeeEEecCCc
Confidence 5 4777899999999999999999999999987 78999999999974
No 72
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.95 E-value=4.3e-29 Score=314.13 Aligned_cols=151 Identities=14% Similarity=0.081 Sum_probs=126.3
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++.+.||+|+||+||+|++. .++..||||++............+. +|+.+|..++|+||+++
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~------~~g~~vAvK~i~~~~~~~~~~~~~~--------~Ei~~l~~~~h~~iv~~ 96 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRV------SDGEPFAVKVVDMEGMSEADKNRAQ--------AEVCCLLNCDFFSIVKC 96 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEc------CCCCEEEEEEEecccCCHHHHHHHH--------HHHHHHhcCCCCcEEEe
Confidence 458999999999999999998753 5788999999876544433333333 59999999999999999
Q ss_pred cccccccC--------ceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccc
Q 000399 241 LGLLKTSG--------LITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1566)
Q Consensus 241 ~~~~~~~~--------~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl 309 (1566)
++.+...+ .+++||||+++ +|.++++.. ....+++..++.++.|++.||.|||++||+||||||+|||+
T Consensus 97 ~~~~~~~~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl 176 (496)
T PTZ00283 97 HEDFAKKDPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILL 176 (496)
T ss_pred ecceecccccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEE
Confidence 88875432 37899999996 999998642 23457888999999999999999999999999999999999
Q ss_pred cccchhhhhhcCcCCCCc
Q 000399 310 TDSCWSWLYICDKPLVGF 327 (1566)
Q Consensus 310 ~~~~~~~vKL~DFGlA~~ 327 (1566)
+.++ .+||+|||+++.
T Consensus 177 ~~~~--~vkL~DFGls~~ 192 (496)
T PTZ00283 177 CSNG--LVKLGDFGFSKM 192 (496)
T ss_pred eCCC--CEEEEecccCee
Confidence 9988 799999999873
No 73
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.94 E-value=3.2e-29 Score=303.33 Aligned_cols=192 Identities=20% Similarity=0.237 Sum_probs=168.0
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-C-----CC
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-H-----PN 236 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-H-----pN 236 (1566)
+|++++.||+|+||.|.+|.+. .+++.||||++++.+.- .+ .+..|+.+|..|+ | -|
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~------~T~e~VAIKIiKN~k~f-------~~----Q~~~Ei~iL~~ln~~d~~~~~n 249 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDH------KTGEIVAIKIIKNKKRF-------LR----QAQIEIRILELLNKHDPDDKYN 249 (586)
T ss_pred EEEEEEEecccccceeEEEEec------CCCcEEEEEeeccChHH-------HH----HHHHHHHHHHHHhccCCCCCee
Confidence 8999999999999999999973 68999999999875422 22 2235899999997 4 38
Q ss_pred cccccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 237 VAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 237 IV~l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
||+++++|...+++|||+|.+..+|+++|+.++...++...++.++.||+.||.+||+.||||+|||||||||.+.....
T Consensus 250 ~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~ 329 (586)
T KOG0667|consen 250 IVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSR 329 (586)
T ss_pred EEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCc
Confidence 99999999999999999999999999999988778899999999999999999999999999999999999998877668
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~ag 392 (1566)
|||+|||.|...... ....+.+.+|+|||++.+..|+..+|+|+.||| .-+++.|
T Consensus 330 vKVIDFGSSc~~~q~--------------vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCI-------lAEL~tG 384 (586)
T KOG0667|consen 330 IKVIDFGSSCFESQR--------------VYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCI-------LAELFTG 384 (586)
T ss_pred eeEEecccccccCCc--------------ceeeeeccccccchhhccCCCCCccceeehhhh-------HHhHhcC
Confidence 999999999865421 113457889999999999999999999999999 6777666
No 74
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.94 E-value=2.6e-28 Score=288.78 Aligned_cols=152 Identities=28% Similarity=0.271 Sum_probs=127.2
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
+..++|++.+.||+|+||.||+|.++ .++..||+|.+............ ..+|+.+++.++||||+
T Consensus 4 ~~~~~y~~~~~ig~g~~~~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~--------~~~E~~~l~~l~h~~i~ 69 (309)
T cd07845 4 RSVTEFEKLNRIGEGTYGIVYRARDT------TSGEIVALKKVRMDNERDGIPIS--------SLREITLLLNLRHPNIV 69 (309)
T ss_pred ccccceeEeeeeeecCCEEEEEEEEC------CCCcEEEEEEEEeccCCCCCcch--------hhHHHHHHHhCCCCCCc
Confidence 34678999999999999999998863 46889999998754322211111 23699999999999999
Q ss_pred ccccccccc--CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 239 PVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 239 ~l~~~~~~~--~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
++++++... +.+|+||||++++|.+++... ...+++..++.++.||+.||.|||++|++||||||+||+++.++ .
T Consensus 70 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~--~ 146 (309)
T cd07845 70 ELKEVVVGKHLDSIFLVMEYCEQDLASLLDNM-PTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKG--C 146 (309)
T ss_pred ceEEEEecCCCCeEEEEEecCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--C
Confidence 999998755 578999999999998888743 24578889999999999999999999999999999999999988 7
Q ss_pred hhhcCcCCCCc
Q 000399 317 LYICDKPLVGF 327 (1566)
Q Consensus 317 vKL~DFGlA~~ 327 (1566)
+||+|||+++.
T Consensus 147 ~kL~dfg~~~~ 157 (309)
T cd07845 147 LKIADFGLART 157 (309)
T ss_pred EEECccceeee
Confidence 99999998863
No 75
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.94 E-value=7.5e-29 Score=286.62 Aligned_cols=198 Identities=16% Similarity=0.220 Sum_probs=171.2
Q ss_pred cccc--ceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 163 ALFP--IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 163 ~y~~--~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
-|++ .+.||+|.||+||-|+++ .+|+.||||++.+-+.......+.. .|+.||+++.||.||.+
T Consensus 563 vYQif~devLGSGQFG~VYgg~hR------ktGrdVAvKvIdKlrFp~kqesqlR--------~EVaILq~l~HPGiV~l 628 (888)
T KOG4236|consen 563 VYQIFADEVLGSGQFGTVYGGKHR------KTGRDVAVKVIDKLRFPTKQESQLR--------NEVAILQNLHHPGIVNL 628 (888)
T ss_pred HHHhhhHhhccCCcceeeecceec------ccCceeeeeeeecccCCCchHHHHH--------HHHHHHHhcCCCCeeEE
Confidence 3554 789999999999999974 6899999999999877665554443 69999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch-hhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~-~~vKL 319 (1566)
.-.|++.+.+++|||.+.|+..+.|-.+..+.+++...++++.||+.||.|||.++|+|+||||+|||+.+... .++||
T Consensus 629 e~M~ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKl 708 (888)
T KOG4236|consen 629 ECMFETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKL 708 (888)
T ss_pred EEeecCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceee
Confidence 99999999999999999997777666667788999999999999999999999999999999999999987643 58999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
||||+||..... .|....+|||.|.|||++..+.|....|+|+-|+| .+-.++|.
T Consensus 709 CDFGfARiIgEk------------sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVI-------iYVsLSGT 763 (888)
T KOG4236|consen 709 CDFGFARIIGEK------------SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVI-------IYVSLSGT 763 (888)
T ss_pred ccccceeecchh------------hhhhhhcCCccccCHHHHhhccccccccceeeeEE-------EEEEeccc
Confidence 999999975521 13455679999999999999999999999999998 55556664
No 76
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=1.9e-27 Score=265.86 Aligned_cols=258 Identities=15% Similarity=0.215 Sum_probs=215.0
Q ss_pred CCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeE
Q 000399 1282 CEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKW 1358 (1566)
Q Consensus 1282 H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlW 1358 (1566)
|...|+. |+|+-.. .++++.|++|++||..++ ....++||+++|.+++|+-.|.+++|+|. |=.+++|
T Consensus 107 ~r~~vt~v~~hp~~~~-----v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSs----Dl~~~LW 177 (406)
T KOG0295|consen 107 HRSSVTRVIFHPSEAL-----VVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSS----DLSAKLW 177 (406)
T ss_pred cccceeeeeeccCceE-----EEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCC----ccchhhe
Confidence 6667777 7988887 999999999999999987 77899999999999999999999999998 8889999
Q ss_pred Eecc-cccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccc-----------cccCCCCC
Q 000399 1359 ELTR-INCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDS-----------LHGGSPSS 1424 (1566)
Q Consensus 1359 Dl~t-g~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~-----------~~~~~~~~ 1424 (1566)
|..+ -+|++...||+..|.+++|.|.|.+++|| |.+|+.||+.+|-|+.++.+|...+ +.+++.+.
T Consensus 178 d~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dq 257 (406)
T KOG0295|consen 178 DFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQ 257 (406)
T ss_pred eHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCc
Confidence 9987 68999999999999999999999999998 9999999999999999999887542 22233333
Q ss_pred cccccccCCCC-CCCCcccccccccccccchhHHHhhhhh-----ccceEEEEecCceEEEEEccCCceeeeeccCCccc
Q 000399 1425 SISKINTDQVG-MLNSNTLSSGILSTAFDGNLYTCLHHIE-----CVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTEL 1498 (1566)
Q Consensus 1425 ~~~~~~~~~~~-~~~~~~~~~~V~svafsp~~~t~v~~~p-----dg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v 1498 (1566)
.+.+|...... ...+..|...|.+++|.|.....-..-. .|.++.+||.|++||+||+.+|.|+.++.+|
T Consensus 258 tl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~gh---- 333 (406)
T KOG0295|consen 258 TLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGH---- 333 (406)
T ss_pred eEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecc----
Confidence 34444433332 2345568889999999887321111111 2469999999999999999999999999987
Q ss_pred CchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeecc
Q 000399 1499 GFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1499 ~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafspd 1565 (1566)
..+|+.++|+ |.|++|+|+.+|+++++||++++++..++.+|+..|++++|+.+
T Consensus 334 --dnwVr~~af~-----------p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hfvt~lDfh~~ 387 (406)
T KOG0295|consen 334 --DNWVRGVAFS-----------PGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHFVTSLDFHKT 387 (406)
T ss_pred --cceeeeeEEc-----------CCCeEEEEEecCCcEEEEEeccceeeeccCCCcceeEEEecCCC
Confidence 5567777765 66689999999999999999999999999999999999999754
No 77
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.94 E-value=2.8e-27 Score=262.86 Aligned_cols=222 Identities=17% Similarity=0.340 Sum_probs=198.8
Q ss_pred ccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccc
Q 000399 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1354 (1566)
Q Consensus 1278 ~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~t 1354 (1566)
....|.+||+| +-|...| ++|||.|++|+|||+.++ ...++.||-..|+.|++|+-..++++++. |+.
T Consensus 146 Vi~gHlgWVr~vavdP~n~w-----f~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~ge----dk~ 216 (460)
T KOG0285|consen 146 VISGHLGWVRSVAVDPGNEW-----FATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGE----DKQ 216 (460)
T ss_pred hhhhccceEEEEeeCCCcee-----EEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecC----CCe
Confidence 35579999999 6887787 999999999999999988 55789999999999999999999999998 999
Q ss_pred eeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccC
Q 000399 1355 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTD 1432 (1566)
Q Consensus 1355 VrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~ 1432 (1566)
|+.||++..+.++.|.||-+.|+|++.+|....|++| |.++||||+++...+.++.+|
T Consensus 217 VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH-------------------- 276 (460)
T KOG0285|consen 217 VKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGH-------------------- 276 (460)
T ss_pred eEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCC--------------------
Confidence 9999999999999999999999999999999999888 999999999999999999886
Q ss_pred CCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCC
Q 000399 1433 QVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGS 1512 (1566)
Q Consensus 1433 ~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~ 1512 (1566)
...|.+|.+.|. ...+++||.|++||+||++.|+...++..| ...|++++.+|.
T Consensus 277 ----------~~~V~~V~~~~~----------dpqvit~S~D~tvrlWDl~agkt~~tlt~h------kksvral~lhP~ 330 (460)
T KOG0285|consen 277 ----------TNPVASVMCQPT----------DPQVITGSHDSTVRLWDLRAGKTMITLTHH------KKSVRALCLHPK 330 (460)
T ss_pred ----------CCcceeEEeecC----------CCceEEecCCceEEEeeeccCceeEeeecc------cceeeEEecCCc
Confidence 445667776665 457999999999999999999999888866 445677777765
Q ss_pred CcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1513 ~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
. ..+||+|.|+ |+-|++..|..++.+.+|+.-|++++.+.||
T Consensus 331 e-----------~~fASas~dn-ik~w~~p~g~f~~nlsgh~~iintl~~nsD~ 372 (460)
T KOG0285|consen 331 E-----------NLFASASPDN-IKQWKLPEGEFLQNLSGHNAIINTLSVNSDG 372 (460)
T ss_pred h-----------hhhhccCCcc-ceeccCCccchhhccccccceeeeeeeccCc
Confidence 4 5788999886 8999999999999999999999999998876
No 78
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.94 E-value=3.6e-28 Score=283.30 Aligned_cols=148 Identities=20% Similarity=0.250 Sum_probs=127.5
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++++.||+|+||.||+|++. .++..+|||.+............+. +|++++++++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i~~~~~ 66 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNK------LTGEVVALKKIRLDTETEGVPSTAI--------REISLLKELNHPNIVKLLD 66 (284)
T ss_pred CceeeeeecCCCceEEEEEEEC------CCCCEEEEEEccccccccccchHHH--------HHHHHHHhcCCCCCcchhh
Confidence 4889999999999999998753 4678899998865432222222333 5999999999999999999
Q ss_pred cccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
++.+.+..++||||++++|.+++...+...+++..++.++.|++.||.|||++|++||||||+||+++.++ .+||+||
T Consensus 67 ~~~~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~--~~~l~df 144 (284)
T cd07860 67 VIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG--AIKLADF 144 (284)
T ss_pred hcccCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEeec
Confidence 99999999999999988999988765556688889999999999999999999999999999999999998 7999999
Q ss_pred CCCC
Q 000399 323 PLVG 326 (1566)
Q Consensus 323 GlA~ 326 (1566)
|+++
T Consensus 145 g~~~ 148 (284)
T cd07860 145 GLAR 148 (284)
T ss_pred cchh
Confidence 9876
No 79
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.94 E-value=1.2e-27 Score=290.31 Aligned_cols=212 Identities=19% Similarity=0.364 Sum_probs=192.6
Q ss_pred cCCCCCCCCCcccccccCccCCCCceEeee--------------------------------eehhhhhccCcceeeeec
Q 000399 1289 PTPAASWDGPDFLGRVGGLKDESPWKIKAS--------------------------------ILSSIRAHHGALRSVAVG 1336 (1566)
Q Consensus 1289 fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~--------------------------------~l~tl~gH~~~V~slafs 1336 (1566)
||+|++. ||.|-.|..|++|.+... ...++.||+++|..+.|+
T Consensus 386 fSddssm-----lA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~sFs 460 (707)
T KOG0263|consen 386 FSDDSSM-----LACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGCSFS 460 (707)
T ss_pred ecCCcch-----hhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEeecCCCceeeeeec
Confidence 8888887 999999999999988621 223578999999999999
Q ss_pred CcceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccc
Q 000399 1337 QDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSM 1414 (1566)
Q Consensus 1337 pd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~ 1414 (1566)
||.++|+|+|. |++||+|.+.+..|+-.|+||..+|+++.|+|-|-++||+ |++.++|.....++++.+.+|
T Consensus 461 Pd~rfLlScSE----D~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~PlRifagh-- 534 (707)
T KOG0263|consen 461 PDRRFLLSCSE----DSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGH-- 534 (707)
T ss_pred ccccceeeccC----CcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCchhhhccc--
Confidence 99999999998 9999999999999999999999999999999999999877 999999999999999988876
Q ss_pred cccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccC
Q 000399 1415 DSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGE 1494 (1566)
Q Consensus 1415 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h 1494 (1566)
-+.|.|++|||+ +.++++||.|.+||+||+.+|..++.|.||
T Consensus 535 ----------------------------lsDV~cv~FHPN----------s~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH 576 (707)
T KOG0263|consen 535 ----------------------------LSDVDCVSFHPN----------SNYVATGSSDRTVRLWDVSTGNSVRIFTGH 576 (707)
T ss_pred ----------------------------ccccceEEECCc----------ccccccCCCCceEEEEEcCCCcEEEEecCC
Confidence 345778888887 899999999999999999999999999987
Q ss_pred CcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1495 PTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1495 ~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
.++|.+++|+ |+|++||+|+.||.|++||+.+|+++..+.+|++.|.+|.|+.||
T Consensus 577 ------~~~V~al~~S-----------p~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg 631 (707)
T KOG0263|consen 577 ------KGPVTALAFS-----------PCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDG 631 (707)
T ss_pred ------CCceEEEEEc-----------CCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCC
Confidence 5566777765 677899999999999999999999999999999999999999987
No 80
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=5.7e-29 Score=274.37 Aligned_cols=214 Identities=17% Similarity=0.170 Sum_probs=180.9
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
.+++|..++.||+|+||+|.+|+.+ .+++.+|+|+++++-+...+.... .+.|-++|+..+||.+..
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEK------at~k~YAiKIlkKeviiakdEVAH-------TlTE~RVL~~~~HPFLt~ 232 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREK------ATGKLYAIKILKKEVIIAKDEVAH-------TLTENRVLQNCRHPFLTS 232 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeec------ccCceeehhhhhhhheeehHHhhh-------hhhHHHHHHhccCcHHHH
Confidence 4679999999999999999998864 689999999999876655443322 247999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
|...|++.+.+|+||||+.| .|+-.|. +...+++..++++..+|+.||.|||+++||+||||.+|+|++.+| ++|
T Consensus 233 LKYsFQt~drlCFVMeyanGGeLf~HLs--rer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDG--HIK 308 (516)
T KOG0690|consen 233 LKYSFQTQDRLCFVMEYANGGELFFHLS--RERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDG--HIK 308 (516)
T ss_pred hhhhhccCceEEEEEEEccCceEeeehh--hhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCC--ceE
Confidence 99999999999999999997 9998887 356699999999999999999999999999999999999999999 899
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc-CC
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW-GD 397 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~-~d 397 (1566)
|+|||+++..... +. ...+++|||.|.|||++...+|+..+|+|..|++ ++++.+||-+ ..
T Consensus 309 itDFGLCKE~I~~-----g~------t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVV-------MYEMmCGRLPFyn 370 (516)
T KOG0690|consen 309 ITDFGLCKEEIKY-----GD------TTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVV-------MYEMMCGRLPFYN 370 (516)
T ss_pred eeecccchhcccc-----cc------eeccccCChhhcCchhhccccccceeehhhhhHH-------HHHHHhccCcccc
Confidence 9999999964421 11 2234569999999999999999999999999988 8899999874 33
Q ss_pred ccceeecceeE
Q 000399 398 YTFHMVMPWVI 408 (1566)
Q Consensus 398 l~q~pv~pwv~ 408 (1566)
-.+...|--|+
T Consensus 371 ~dh~kLFeLIl 381 (516)
T KOG0690|consen 371 KDHEKLFELIL 381 (516)
T ss_pred cchhHHHHHHH
Confidence 33334444444
No 81
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.94 E-value=2.2e-28 Score=291.93 Aligned_cols=210 Identities=18% Similarity=0.176 Sum_probs=171.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhc-cccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVL-GSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~-vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
.......+.||+|+||+||+|.. .|.. ||+|++...........+|. +|+.+|.+++|||||+
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~--------~g~~~vavK~~~~~~~~~~~~~~f~--------~E~~il~~l~HpNIV~ 103 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKW--------RGTDVVAVKIISDPDFDDESRKAFR--------REASLLSRLRHPNIVQ 103 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEe--------CCceeEEEEEecchhcChHHHHHHH--------HHHHHHHhCCCCCeee
Confidence 34566677799999999998763 4566 99999987655544444555 5999999999999999
Q ss_pred ccccccccC-ceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhcc-ccCCCccCCCccccccchhh
Q 000399 240 VLGLLKTSG-LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG-IAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 240 l~~~~~~~~-~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~g-IiHrDLKp~NILl~~~~~~~ 316 (1566)
++|++.... .++|||||+++ +|.+++.......++...+..++.||++||.|||+++ ||||||||+|||++.+. .+
T Consensus 104 f~G~~~~~~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~-~~ 182 (362)
T KOG0192|consen 104 FYGACTSPPGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKG-KT 182 (362)
T ss_pred EEEEEcCCCCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCC-CE
Confidence 999999887 79999999996 9999998543566889999999999999999999999 99999999999999985 26
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc--ccchhhccccccccccCCchhhhHHHhhccc-
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ--SMDWHSQFNRWWRGELSNFEYLLFLNKLAGR- 393 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~--~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr- 393 (1566)
+||||||+++...... ...+...||+.|||||++. ...|+.++|+|+.|.+ ..+.++|+
T Consensus 183 ~KI~DFGlsr~~~~~~-----------~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIv-------lWEl~t~~~ 244 (362)
T KOG0192|consen 183 LKIADFGLSREKVISK-----------TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIV-------LWELLTGEI 244 (362)
T ss_pred EEECCCccceeecccc-----------ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHH-------HHHHHHCCC
Confidence 9999999998654210 0112245999999999999 6699999999999987 78888885
Q ss_pred ccCCccceeecc
Q 000399 394 RWGDYTFHMVMP 405 (1566)
Q Consensus 394 s~~dl~q~pv~p 405 (1566)
+|.++..-.+.-
T Consensus 245 Pf~~~~~~~~~~ 256 (362)
T KOG0192|consen 245 PFEDLAPVQVAS 256 (362)
T ss_pred CCCCCCHHHHHH
Confidence 566665433333
No 82
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.94 E-value=3.7e-28 Score=288.85 Aligned_cols=187 Identities=20% Similarity=0.168 Sum_probs=158.3
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+.+++++.||+|-||+||+|+. .....||+|.++......+ .|+ +|+++|++|+|+|||+++
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~-------~~~~~vavk~ik~~~m~~~---~f~--------~Ea~iMk~L~H~~lV~l~ 267 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKW-------NGSTKVAVKTIKEGSMSPE---AFL--------REAQIMKKLRHEKLVKLY 267 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEE-------cCCCcccceEEeccccChh---HHH--------HHHHHHHhCcccCeEEEE
Confidence 3678899999999999998884 3455899999987644433 455 599999999999999999
Q ss_pred ccccccCceeeeccCCc-cchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~-gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++..++.+|||||||+ |+|.++|+...+..+.......++.|||+||+||+++++|||||.+.||||+++. .+||+
T Consensus 268 gV~~~~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~--~vKIs 345 (468)
T KOG0197|consen 268 GVCTKQEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDL--VVKIS 345 (468)
T ss_pred EEEecCCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCc--eEEEc
Confidence 99999999999999999 5999999975566788888999999999999999999999999999999999999 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||+||.... +.+......+ -...|.|||.+....++.+.|+|+.|++
T Consensus 346 DFGLAr~~~d-~~Y~~~~~~k---------fPIkWtAPEa~~~~~FS~kSDVWSFGVl 393 (468)
T KOG0197|consen 346 DFGLARLIGD-DEYTASEGGK---------FPIKWTAPEALNYGKFSSKSDVWSFGVL 393 (468)
T ss_pred ccccccccCC-CceeecCCCC---------CCceecCHHHHhhCCcccccceeehhhh
Confidence 9999995442 2222222222 3445899999999999999999999987
No 83
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.94 E-value=1.1e-26 Score=254.60 Aligned_cols=258 Identities=16% Similarity=0.251 Sum_probs=213.5
Q ss_pred hhccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee--eehhhhhccCcceeeeecCcceEEEeeccCCCc
Q 000399 1276 TSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS--ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1351 (1566)
Q Consensus 1276 ~~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~--~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~ 1351 (1566)
......|++.|.. |+|+|.. |||||.|..|.+|++.+. ...+++||.++|..+.|..|++.++|+|.
T Consensus 40 ~m~l~gh~geI~~~~F~P~gs~-----~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gt---- 110 (338)
T KOG0265|consen 40 IMLLPGHKGEIYTIKFHPDGSC-----FASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGT---- 110 (338)
T ss_pred hhhcCCCcceEEEEEECCCCCe-----EeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecC----
Confidence 4456679999998 9999998 999999999999998764 45567799999999999999999999999
Q ss_pred ccceeeEEecccccccccccccccccceEEeecCCce-eec--cCcEEEeecCCCcEEEEeecc----------cccccc
Q 000399 1352 KGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFAEQ----------SMDSLH 1418 (1566)
Q Consensus 1352 D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~L-aSg--DgtIkLWDl~tg~~l~~l~~h----------~~~~~~ 1418 (1566)
|++|+.||+++|++++.+++|.+-|++++-+.-|..+ .|+ |++++|||+++..+++++... ....+.
T Consensus 111 Dk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~s~qv~ 190 (338)
T KOG0265|consen 111 DKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDTSDQVI 190 (338)
T ss_pred CceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEeccccccee
Confidence 9999999999999999999999999999854445555 466 999999999988887776322 112334
Q ss_pred cCCCCCcccccccCCC-CCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccC----Cceeeeecc
Q 000399 1419 GGSPSSSISKINTDQV-GMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQ----GQKLHLWRG 1493 (1566)
Q Consensus 1419 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~t----g~~l~~~~~ 1493 (1566)
.+.-++.+++|+.... ....+.+|...|..++.++. |..+.+-+.|.++++||++. .+++..+.+
T Consensus 191 sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~----------gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g 260 (338)
T KOG0265|consen 191 SGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRY----------GSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQG 260 (338)
T ss_pred eccccCceeeeccccCcceEEeecccCceeeEEeccC----------CCccccccccceEEEEEecccCCCCceEEEeec
Confidence 4555667788887544 34556788888888888876 99999999999999999985 366888888
Q ss_pred CCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeecc
Q 000399 1494 EPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1494 h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafspd 1565 (1566)
|.... ..+ ...++++|++..+.+|+.|..+++||+.+...+..|+||.+.|++++|+|.
T Consensus 261 ~~hnf----ekn---------lL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~ 319 (338)
T KOG0265|consen 261 HIHNF----EKN---------LLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPT 319 (338)
T ss_pred chhhh----hhh---------cceeeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCC
Confidence 74322 111 234678899999999999999999999999999999999999999999995
No 84
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=99.94 E-value=1.4e-26 Score=252.62 Aligned_cols=223 Identities=16% Similarity=0.291 Sum_probs=197.5
Q ss_pred cccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-------eehhhhhccCcceeeeecCcceEEEeeccCC
Q 000399 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-------ILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1349 (1566)
Q Consensus 1279 ~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-------~l~tl~gH~~~V~slafspd~~~LaSgS~~~ 1349 (1566)
.+.-+.||.. |+|.|+. +|+||-|+...||++.+. ..+.+.||++-+.|+.|-+|+ .++|||.
T Consensus 93 ipl~s~WVMtCA~sPSg~~-----VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~-~ilT~SG-- 164 (343)
T KOG0286|consen 93 IPLPSSWVMTCAYSPSGNF-----VACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDN-HILTGSG-- 164 (343)
T ss_pred EecCceeEEEEEECCCCCe-----EEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcCCC-ceEecCC--
Confidence 3445789987 9999998 999999999999998743 456789999999999998855 5778887
Q ss_pred CcccceeeEEecccccccccccccccccceEEee-cCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcc
Q 000399 1350 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLS-SSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSI 1426 (1566)
Q Consensus 1350 ~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp-~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~ 1426 (1566)
|.|+.+||+++|+.+..|.||.+.|.+++++| +++.++|| |++.+|||++.+.++++|.+|
T Consensus 165 --D~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~gh-------------- 228 (343)
T KOG0286|consen 165 --DMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGH-------------- 228 (343)
T ss_pred --CceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCcceeEeeccc--------------
Confidence 99999999999999999999999999999999 78888877 999999999999999999886
Q ss_pred cccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHH
Q 000399 1427 SKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSA 1506 (1566)
Q Consensus 1427 ~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~s 1506 (1566)
..-|++|.|.|+ |.-+++||.|++.|+||+|..+.+..|..... ...|++
T Consensus 229 ----------------esDINsv~ffP~----------G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~----~~gitS 278 (343)
T KOG0286|consen 229 ----------------ESDINSVRFFPS----------GDAFATGSDDATCRLYDLRADQELAVYSHDSI----ICGITS 278 (343)
T ss_pred ----------------ccccceEEEccC----------CCeeeecCCCceeEEEeecCCcEEeeeccCcc----cCCcee
Confidence 455888999887 89999999999999999999999999985422 344555
Q ss_pred hhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1507 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1507 v~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
++| |..|++|++|..|.++.+||+-.++.+..+.||++.|+||..+|||
T Consensus 279 v~F-----------S~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG 327 (343)
T KOG0286|consen 279 VAF-----------SKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDG 327 (343)
T ss_pred EEE-----------cccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCC
Confidence 555 5677899999999999999999999999999999999999999998
No 85
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.93 E-value=1.3e-27 Score=261.25 Aligned_cols=321 Identities=16% Similarity=0.197 Sum_probs=241.5
Q ss_pred HHHHHhhhcccceeecccccccccccccccCcccC----CCCcCccCc---cceeecccccccccCCCCcccccc---cc
Q 000399 1189 LEQFLLRYHNWKWEYTGESSRISEENISAKRPLLN----KGSTSQCNP---AKLLLNGVGWSIPQSQGSRSSKNL---IP 1258 (1566)
Q Consensus 1189 ~e~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~---~~~~~~~~g~s~~~~~~~~~~~~~---i~ 1258 (1566)
-|+|+.+++...++|++|.+.|+- ..++.|...- ++-..-..| ..++.+.+.| .|.||...-+.. ..
T Consensus 111 peRy~~lE~ll~R~YFDp~EaY~d-ssKEkrRa~IAQ~ls~EV~VVppSRLlaLlGQaLKW--QqHQGLLPPGt~iDLFR 187 (508)
T KOG0275|consen 111 PERYIRLENLLNRSYFDPREAYGD-SSKEKRRAVIAQALSGEVHVVPPSRLLALLGQALKW--QQHQGLLPPGTTIDLFR 187 (508)
T ss_pred hHHHHHHHHHhcccccChhhhcCc-chHHHHHHHHHHHhcCceEEcChHHHHHHHHHHhhh--HhhcCCCCCCceeeecc
Confidence 367888888888899988887763 4455544321 111222334 3345667779 577886553332 12
Q ss_pred ccccccc-ccchHHHHHHhhccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeeeeeh---------hhhhc
Q 000399 1259 QRRVYDY-HKSSVERQEATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASILS---------SIRAH 1326 (1566)
Q Consensus 1259 ~~~~~~l-e~~~~~~~~~~~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~~l~---------tl~gH 1326 (1566)
-++..+- +...-...+...........+-| |||||++ |++||.||-|.+||..++.++ .+..|
T Consensus 188 GkAA~K~~~Ee~~Pt~l~r~IKFg~KSh~EcA~FSPDgqy-----LvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMm 262 (508)
T KOG0275|consen 188 GKAAMKDQEEERYPTQLARSIKFGQKSHVECARFSPDGQY-----LVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMM 262 (508)
T ss_pred chhhhhhhHhhhchHHhhhheecccccchhheeeCCCCce-----Eeeccccceeeeehhccchhhhhhhhhhhcceeec
Confidence 2222111 00111112222333334445555 9999999 999999999999999887442 45568
Q ss_pred cCcceeeeecCcceEEEeeccCCCcccceeeEEecccccccccc-cccccccceEEeecCCceeec--cCcEEEeecCCC
Q 000399 1327 HGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYY-GHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG 1403 (1566)
Q Consensus 1327 ~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~-gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg 1403 (1566)
..+|.|++|+.|..+++||+. ||.|+||.+.+|.|++.|. .|+..|+|+.|+.++..+.|+ |.+++|..+.+|
T Consensus 263 d~aVlci~FSRDsEMlAsGsq----DGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSG 338 (508)
T KOG0275|consen 263 DDAVLCISFSRDSEMLASGSQ----DGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSG 338 (508)
T ss_pred ccceEEEeecccHHHhhccCc----CCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccc
Confidence 999999999999999999999 9999999999999999996 899999999999999999766 999999999999
Q ss_pred cEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEcc
Q 000399 1404 KLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDIN 1483 (1566)
Q Consensus 1404 ~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~ 1483 (1566)
+++..+.+|+ +.|+...|.++ |..++++|+||+|++|+..
T Consensus 339 K~LKEfrGHs------------------------------Syvn~a~ft~d----------G~~iisaSsDgtvkvW~~K 378 (508)
T KOG0275|consen 339 KCLKEFRGHS------------------------------SYVNEATFTDD----------GHHIISASSDGTVKVWHGK 378 (508)
T ss_pred hhHHHhcCcc------------------------------ccccceEEcCC----------CCeEEEecCCccEEEecCc
Confidence 9999998874 44666667665 9999999999999999999
Q ss_pred CCceeeeeccCCcccCchhhHHHhhcc----------------------------------CCCcccCCCcccchhHHHh
Q 000399 1484 QGQKLHLWRGEPTELGFPSLVSAICAC----------------------------------GSEKMQAGGAVASPSWIAA 1529 (1566)
Q Consensus 1484 tg~~l~~~~~h~~~v~~~~~V~sv~~s----------------------------------~~~~~~~~~~spdg~~LaS 1529 (1566)
+++|+.+|+..... -.|++|-.- ..+.|.++..||.|.|+.+
T Consensus 379 tteC~~Tfk~~~~d----~~vnsv~~~PKnpeh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~lSpkGewiYc 454 (508)
T KOG0275|consen 379 TTECLSTFKPLGTD----YPVNSVILLPKNPEHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAILSPKGEWIYC 454 (508)
T ss_pred chhhhhhccCCCCc----ccceeEEEcCCCCceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEEEEecCCCcEEEE
Confidence 99999998865321 122222111 1234556668999999999
Q ss_pred ccCCCceeEEeeccCceeEEeeccCceeeEeeeecc
Q 000399 1530 GLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1530 Gs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafspd 1565 (1566)
.+.|+.++.|.+.+|++-.++..|+..|..++.+|.
T Consensus 455 igED~vlYCF~~~sG~LE~tl~VhEkdvIGl~HHPH 490 (508)
T KOG0275|consen 455 IGEDGVLYCFSVLSGKLERTLPVHEKDVIGLTHHPH 490 (508)
T ss_pred EccCcEEEEEEeecCceeeeeecccccccccccCcc
Confidence 999999999999999999999999999999999884
No 86
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.93 E-value=6.2e-28 Score=263.56 Aligned_cols=197 Identities=15% Similarity=0.169 Sum_probs=172.2
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+-|.++.+||+|+||.||+|.++ +.|.++|||.+..+ .+..+.+ .|+.||++++.|+||++|
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~------EsG~v~AIK~VPV~----sDLQEII--------KEISIMQQC~S~yVVKYY 94 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHR------ESGHVLAIKKVPVD----TDLQEII--------KEISIMQQCKSKYVVKYY 94 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHh------ccCcEEEEEecCcc----chHHHHH--------HHHHHHHHcCCchhhhhh
Confidence 45899999999999999999985 79999999998653 3344555 499999999999999999
Q ss_pred ccccccCceeeeccCCc-cchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~-gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
|.+.....+|||||||+ |++.++++. +++++++.++.-+++..++||+|||...-||||||..|||++.+| +.||+
T Consensus 95 GSYFK~sDLWIVMEYCGAGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G--~AKLA 171 (502)
T KOG0574|consen 95 GSYFKHSDLWIVMEYCGAGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDG--IAKLA 171 (502)
T ss_pred hhhccCCceEeehhhcCCCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccc--hhhhh
Confidence 99999999999999999 599999984 567799999999999999999999999999999999999999999 89999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc-CC
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW-GD 397 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~-~d 397 (1566)
|||+|..... .+. ...+.+|||+|||||++....|+...|+|+.|.- .+++.-||++ .|
T Consensus 172 DFGVAGQLTD-------TMA----KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGIT-------aIEMAEG~PPYsD 231 (502)
T KOG0574|consen 172 DFGVAGQLTD-------TMA----KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGIT-------AIEMAEGRPPYSD 231 (502)
T ss_pred hccccchhhh-------hHH----hhCccccCcccccHHHHHHhccchhhhHhhhcch-------hhhhhcCCCCccc
Confidence 9999986552 111 1234579999999999999999999999999955 7889999985 44
No 87
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.93 E-value=3e-28 Score=249.58 Aligned_cols=189 Identities=19% Similarity=0.205 Sum_probs=159.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|...++||+|+||+||+|++ .+++.+||+|.+..+..... ++.+++||+.+|+.++|.|||+++
T Consensus 2 ~~ydkmekigegtygtvfkarn------~~t~eivalkrvrlddddeg--------vpssalreicllkelkhknivrl~ 67 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARN------RETHEIVALKRVRLDDDDEG--------VPSSALREICLLKELKHKNIVRLH 67 (292)
T ss_pred cchHHHHhhcCCcceeeEeccc------CCccceEEEEEEeccCCCCC--------CcHHHHHHHHHHHHhhhcceeehh
Confidence 3688889999999999999996 37899999999886543322 223456899999999999999999
Q ss_pred ccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++...+..+.+|+|||..+|..+.... ++-+....++.++.|+++||.+||++++.||||||.|+||+.+| .+|++|
T Consensus 68 dvlhsdkkltlvfe~cdqdlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ng--elklad 144 (292)
T KOG0662|consen 68 DVLHSDKKLTLVFEFCDQDLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNG--ELKLAD 144 (292)
T ss_pred hhhccCceeEEeHHHhhHHHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCC--cEEecc
Confidence 999999999999999999999998753 45578888999999999999999999999999999999999999 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhcccccccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGEL 378 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~i 378 (1566)
||+||.... .+.|++.. +-|.+|++|.++.+. -|+...|+|+.|||
T Consensus 145 fglarafgi----------pvrcysae-vvtlwyrppdvlfgakly~tsidmwsagci 191 (292)
T KOG0662|consen 145 FGLARAFGI----------PVRCYSAE-VVTLWYRPPDVLFGAKLYSTSIDMWSAGCI 191 (292)
T ss_pred cchhhhcCC----------ceEeeece-eeeeeccCcceeeeeehhccchHhhhcchH
Confidence 999996442 12333322 458899999987654 57889999999998
No 88
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.93 E-value=8.6e-28 Score=292.88 Aligned_cols=210 Identities=16% Similarity=0.167 Sum_probs=164.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++++.||+|+||.||+|.++ .++..||||++.+.........+.+. +|+++|+.++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~il~~l~hp~iv~~~ 67 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKK------DTGKIYAMKTLLKSEMFKKDQLAHVK-------AERDVLAESDSPWVVSLY 67 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHhHHHHHHH-------HHHHHHHhCCCCCcceEE
Confidence 36899999999999999998763 57889999998764332222222222 699999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+.+.+|+||||+++ +|.+++.. ...+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~--~~kl~ 143 (377)
T cd05629 68 YSFQDAQYLYLIMEFLPGGDLMTMLIK--YDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGG--HIKLS 143 (377)
T ss_pred EEEEcCCeeEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC--CEEEe
Confidence 999999999999999986 99999973 45678999999999999999999999999999999999999988 79999
Q ss_pred CcCCCCcccccccc------CCC--CCCc---------------------e-------eeeecCCccccccccccccccc
Q 000399 321 DKPLVGFNSIADWC------TIP--TSPM---------------------I-------GCCIEGCSSQGLYADLKLSQSM 364 (1566)
Q Consensus 321 DFGlA~~~~~~~~~------~~~--~~~~---------------------~-------~~~~~~~~gt~~Y~APE~l~~~ 364 (1566)
|||+++........ ... .... . ........||+.|+|||++.+.
T Consensus 144 DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~ 223 (377)
T cd05629 144 DFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQ 223 (377)
T ss_pred ecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccC
Confidence 99999742210000 000 0000 0 0001124689999999999988
Q ss_pred chhhccccccccccCCchhhhHHHhhccccc
Q 000399 365 DWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 365 ~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
.|+..+|+|+.|++ .+..+.|+.+
T Consensus 224 ~~~~~~DiwSlGvi-------l~elltG~~P 247 (377)
T cd05629 224 GYGQECDWWSLGAI-------MFECLIGWPP 247 (377)
T ss_pred CCCCceeeEecchh-------hhhhhcCCCC
Confidence 99999999999998 6677778754
No 89
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.93 E-value=1.5e-26 Score=280.69 Aligned_cols=221 Identities=17% Similarity=0.254 Sum_probs=195.9
Q ss_pred hccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCccc
Q 000399 1277 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1277 ~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~ 1353 (1566)
+....|++.|+. |+|+-++ |+++|.|++||+|.+.+. ++..++||..+|++|.|+|-|-+|||||. |+
T Consensus 445 ~~L~GH~GPVyg~sFsPd~rf-----LlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~----D~ 515 (707)
T KOG0263|consen 445 RTLYGHSGPVYGCSFSPDRRF-----LLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASH----DQ 515 (707)
T ss_pred EEeecCCCceeeeeecccccc-----eeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCC----Cc
Confidence 347789999998 9999998 999999999999999986 78888999999999999999999999998 99
Q ss_pred ceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCccccccc
Q 000399 1354 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINT 1431 (1566)
Q Consensus 1354 tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~ 1431 (1566)
|-++|.....++.+.+.||-+.|.|+.|+|.+.++++| |.+||+||+.+|..++.|.+|
T Consensus 516 tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH------------------- 576 (707)
T KOG0263|consen 516 TARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGH------------------- 576 (707)
T ss_pred eeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCC-------------------
Confidence 99999999999999999999999999999999999988 999999999999999999876
Q ss_pred CCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccC
Q 000399 1432 DQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACG 1511 (1566)
Q Consensus 1432 ~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~ 1511 (1566)
...|.+++|+|+ |++|++|+.||.|++||+.+|+.+.++.+| ++.|.++.|
T Consensus 577 -----------~~~V~al~~Sp~----------Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~H------t~ti~SlsF-- 627 (707)
T KOG0263|consen 577 -----------KGPVTALAFSPC----------GRYLASGDEDGLIKIWDLANGSLVKQLKGH------TGTIYSLSF-- 627 (707)
T ss_pred -----------CCceEEEEEcCC----------CceEeecccCCcEEEEEcCCCcchhhhhcc------cCceeEEEE--
Confidence 456788888876 999999999999999999999999999988 344566655
Q ss_pred CCcccCCCcccchhHHHhccCCCceeEEeeccC--c----------------------eeEEeeccCceeeEeeee
Q 000399 1512 SEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG--N----------------------VIASWRAHDGYVTKVRII 1563 (1566)
Q Consensus 1512 ~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sg--k----------------------~l~~l~gH~~~V~~Vafs 1563 (1566)
|.+|..||+|+.|++|++||+..- . ++.++.....+|.+|.|.
T Consensus 628 ---------S~dg~vLasgg~DnsV~lWD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llgs~~tK~tpv~~l~Ft 694 (707)
T KOG0263|consen 628 ---------SRDGNVLASGGADNSVRLWDLTKVIELLNLGHISTSNSAITQENNASSLLLGSFYTKNTPVVGLHFT 694 (707)
T ss_pred ---------ecCCCEEEecCCCCeEEEEEchhhcccccccccccccccccccCCCCcceeeeeeecCceEEEEEEe
Confidence 477789999999999999998632 2 455666666777777775
No 90
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.93 E-value=1.7e-27 Score=282.56 Aligned_cols=191 Identities=18% Similarity=0.187 Sum_probs=168.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|+.++.||+|+||.++.++++ .+...+++|.+.-.+......... ..|+.++++++|||||.+
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk------~~~~~~vlK~I~l~~~t~~~r~~A--------~~E~~lis~~~hP~iv~y 68 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHK------SDDKLYVLKKINLEKLTEPERRSA--------IQEMDLLSKLLHPNIVEY 68 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhc------cCCceEEEEEEeccccCchhhHHH--------HHHHHHHHhccCCCeeee
Confidence 568999999999999999999985 466789999998776555443323 369999999999999999
Q ss_pred cccccccCc-eeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 241 LGLLKTSGL-ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 241 ~~~~~~~~~-l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
++.|..++. ++|||+||+| +|.+.|...++..+++..+..|+.|++.|+.|||+++|+|||||+.||+++.++ .||
T Consensus 69 ~ds~~~~~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~--~Vk 146 (426)
T KOG0589|consen 69 KDSFEEDGQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDK--KVK 146 (426)
T ss_pred ccchhcCCceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccC--cee
Confidence 999999988 9999999997 999999977767899999999999999999999999999999999999999999 789
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|.|||+|+...... .+..+++|||.||.||++.+.+|+.+.|+|+.||+
T Consensus 147 LgDfGlaK~l~~~~-----------~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~ 195 (426)
T KOG0589|consen 147 LGDFGLAKILNPED-----------SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCC 195 (426)
T ss_pred ecchhhhhhcCCch-----------hhhheecCCCcccCHHHhCCCCCCccCcchhhcch
Confidence 99999999766311 12345679999999999999999999999999998
No 91
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.93 E-value=6.8e-28 Score=292.31 Aligned_cols=211 Identities=15% Similarity=0.142 Sum_probs=167.3
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++++.||+|+||+||+|+++ .++..+|+|++.+.........+.+. +|+.++..++||||++++
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~il~~~~~~~iv~~~ 67 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKK------DTGHVYAMKILRKADMLEKEQVGHIR-------AERDILVEADSLWVVKMF 67 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHhhHHHHHH-------HHHHHHHhCCCCCcceEE
Confidence 36999999999999999998863 46889999999764332222222232 689999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+.+...+|+||||+++ +|.+++.. .+.+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~--~vkL~ 143 (363)
T cd05628 68 YSFQDKLNLYLIMEFLPGGDMMTLLMK--KDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKG--HVKLS 143 (363)
T ss_pred EEEecCCeEEEEEcCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC--CEEEe
Confidence 999999999999999987 99999973 45688999999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCC--------CC---------CCc-------eeeeecCCcccccccccccccccchhhcccccccc
Q 000399 321 DKPLVGFNSIADWCTI--------PT---------SPM-------IGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~--------~~---------~~~-------~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G 376 (1566)
|||+++.......... .. ... ........+||+.|+|||++.+..++..+|+|+.|
T Consensus 144 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlG 223 (363)
T cd05628 144 DFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLG 223 (363)
T ss_pred eccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhH
Confidence 9999985432100000 00 000 00011234699999999999998999999999999
Q ss_pred ccCCchhhhHHHhhcccccC
Q 000399 377 ELSNFEYLLFLNKLAGRRWG 396 (1566)
Q Consensus 377 ~isnfeyL~~ln~~agrs~~ 396 (1566)
++ .+.++.|+.+.
T Consensus 224 vi-------l~ell~G~~Pf 236 (363)
T cd05628 224 VI-------MYEMLIGYPPF 236 (363)
T ss_pred HH-------HHHHHhCCCCC
Confidence 88 77777887653
No 92
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.93 E-value=2.2e-27 Score=284.78 Aligned_cols=149 Identities=27% Similarity=0.374 Sum_probs=125.7
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|.+.+.||+|+||.||+|++. .++..||||.+............+. +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~ni~~~ 69 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNS------ETNEKVAIKKIANAFDNRIDAKRTL--------REIKLLRHLDHENVIAI 69 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEec------CCCCeEEEEEecccccccchhHHHH--------HHHHHHHhcCCCCccch
Confidence 457999999999999999998863 5789999999875422222222233 59999999999999999
Q ss_pred ccccccc-----CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 241 LGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 241 ~~~~~~~-----~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
++++... ..+|+||||++++|.+++.. .+.+++..++.++.|++.||.|||+++++||||||+||+++.++
T Consensus 70 ~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~-- 145 (337)
T cd07858 70 KDIMPPPHREAFNDVYIVYELMDTDLHQIIRS--SQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANC-- 145 (337)
T ss_pred HHheecccccccCcEEEEEeCCCCCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--
Confidence 9988654 35899999999999998873 34588999999999999999999999999999999999999988
Q ss_pred hhhhcCcCCCCc
Q 000399 316 WLYICDKPLVGF 327 (1566)
Q Consensus 316 ~vKL~DFGlA~~ 327 (1566)
.+||+|||+++.
T Consensus 146 ~~kL~Dfg~~~~ 157 (337)
T cd07858 146 DLKICDFGLART 157 (337)
T ss_pred CEEECcCccccc
Confidence 799999998873
No 93
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.93 E-value=1e-27 Score=292.66 Aligned_cols=209 Identities=14% Similarity=0.154 Sum_probs=165.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++++.||+|+||+||+|++. .++..+|+|++.+.........+.+. +|+.+|+.++|||||++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~E~~il~~~~h~~iv~~~~ 68 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKV------DTKALYAMKTLRKKDVLLRNQVAHVK-------AERDILAEADNEWVVRLYY 68 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEEC------CCCCEEEEEEEeHHHhhhHHHHHHHH-------HHHHHHHhCCCCcCCeEEE
Confidence 5899999999999999998863 57889999998764332222222222 6999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+.+++.+|+||||+++ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g--~~kL~D 144 (382)
T cd05625 69 SFQDKDNLYFVMDYIPGGDMMSLLIR--MGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG--HIKLTD 144 (382)
T ss_pred EEEeCCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC--CEEEeE
Confidence 99999999999999986 99999873 34578899999999999999999999999999999999999998 799999
Q ss_pred cCCCCccccccc---cCCC---------------------------------CCCceeeeecCCcccccccccccccccc
Q 000399 322 KPLVGFNSIADW---CTIP---------------------------------TSPMIGCCIEGCSSQGLYADLKLSQSMD 365 (1566)
Q Consensus 322 FGlA~~~~~~~~---~~~~---------------------------------~~~~~~~~~~~~~gt~~Y~APE~l~~~~ 365 (1566)
||+|+....... .... ......+.....+||+.|+|||++.+..
T Consensus 145 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 224 (382)
T cd05625 145 FGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTG 224 (382)
T ss_pred CCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCC
Confidence 999863221000 0000 0000011123456999999999999999
Q ss_pred hhhccccccccccCCchhhhHHHhhccccc
Q 000399 366 WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 366 y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+..+|+|+.|++ .+.++.|+.+
T Consensus 225 ~~~~~DiwSlGvi-------l~elltG~~P 247 (382)
T cd05625 225 YTQLCDWWSVGVI-------LYEMLVGQPP 247 (382)
T ss_pred CCCeeeEEechHH-------HHHHHhCCCC
Confidence 9999999999988 7777888764
No 94
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93 E-value=1.8e-27 Score=280.26 Aligned_cols=222 Identities=15% Similarity=0.166 Sum_probs=182.5
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
-|..++.||-|+||+|.+++. ..+..++|+|.+.+...........++ .|..||...+.+.||+||.
T Consensus 630 mFvkik~iGvGAFGeV~Lv~K------vDT~~lYAmKTLrKaDVl~rnQvaHVK-------AERDILAEADn~WVVrLyy 696 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRK------VDTRALYAMKTLRKADVLMRNQVAHVK-------AERDILAEADNEWVVRLYY 696 (1034)
T ss_pred ceEEEeeecccccceeEEEee------cchhhHHHHhhhHHHHHHhhhhhhhhh-------hhhhhHhhcCCcceEEEEE
Confidence 578899999999999999874 467999999999987665555555555 7999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.|.+++++|+||||++| ++..+|- +.+.|.|..++||+.++..|+++.|..|+|||||||+|||||.+| ++||+|
T Consensus 697 SFQDkdnLYFVMdYIPGGDmMSLLI--rmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdG--HIKLTD 772 (1034)
T KOG0608|consen 697 SFQDKDNLYFVMDYIPGGDMMSLLI--RMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG--HIKLTD 772 (1034)
T ss_pred EeccCCceEEEEeccCCccHHHHHH--HhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCC--ceeeee
Confidence 99999999999999997 9999887 467899999999999999999999999999999999999999999 899999
Q ss_pred cCCCCcccc---ccccCCCCC----------------------------CceeeeecCCcccccccccccccccchhhcc
Q 000399 322 KPLVGFNSI---ADWCTIPTS----------------------------PMIGCCIEGCSSQGLYADLKLSQSMDWHSQF 370 (1566)
Q Consensus 322 FGlA~~~~~---~~~~~~~~~----------------------------~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~ 370 (1566)
|||+.-... ...+..+.- ....|.....+||+-|+|||++....|+..|
T Consensus 773 FGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~c 852 (1034)
T KOG0608|consen 773 FGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLC 852 (1034)
T ss_pred ccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccc
Confidence 999863221 000100000 0112334466899999999999999999999
Q ss_pred ccccccccCCchhhhHHHhhccccc-CC----ccceeecceeE
Q 000399 371 NRWWRGELSNFEYLLFLNKLAGRRW-GD----YTFHMVMPWVI 408 (1566)
Q Consensus 371 d~Ws~G~isnfeyL~~ln~~agrs~-~d----l~q~pv~pwv~ 408 (1566)
|+|+.|+| +++++-||.. .+ -+||.|.-|-.
T Consensus 853 dwws~gvi-------l~em~~g~~pf~~~tp~~tq~kv~nw~~ 888 (1034)
T KOG0608|consen 853 DWWSVGVI-------LYEMLVGQPPFLADTPGETQYKVINWRN 888 (1034)
T ss_pred hhhHhhHH-------HHHHhhCCCCccCCCCCcceeeeeehhh
Confidence 99999998 7888888874 22 25677777754
No 95
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.93 E-value=1.2e-27 Score=292.20 Aligned_cols=209 Identities=15% Similarity=0.169 Sum_probs=166.0
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
.|++++.||+|+||+||+|+++ .++..+|+|++.+.........+.+. +|+.+|+.++||||+++++
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~E~~il~~l~h~~iv~l~~ 68 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKV------DTHALYAMKTLRKKDVLNRNQVAHVK-------AERDILAEADNEWVVKLYY 68 (381)
T ss_pred CceEEEEEeecCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhHHHHHHH-------HHHHHHHhcCCCCeeeeEE
Confidence 5899999999999999998863 57889999999865433322222222 6999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+.+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ ++||+|
T Consensus 69 ~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~--~~kL~D 144 (381)
T cd05626 69 SFQDKDNLYFVMDYIPGGDMMSLLIR--MEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDG--HIKLTD 144 (381)
T ss_pred EEecCCEEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCC--CEEEee
Confidence 99999999999999986 99999873 44578899999999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccc---cCC------C---------------------------CCCceeeeecCCcccccccccccccccc
Q 000399 322 KPLVGFNSIADW---CTI------P---------------------------TSPMIGCCIEGCSSQGLYADLKLSQSMD 365 (1566)
Q Consensus 322 FGlA~~~~~~~~---~~~------~---------------------------~~~~~~~~~~~~~gt~~Y~APE~l~~~~ 365 (1566)
||+++....... ... . ......+......||+.|+|||++.+..
T Consensus 145 FGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~ 224 (381)
T cd05626 145 FGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKG 224 (381)
T ss_pred CcCCcccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCC
Confidence 999864321000 000 0 0000011123457999999999999888
Q ss_pred hhhccccccccccCCchhhhHHHhhccccc
Q 000399 366 WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 366 y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+..+|+|+.|+| .+..+.|+.+
T Consensus 225 ~~~~~DiwSlG~i-------l~elltG~~P 247 (381)
T cd05626 225 YTQLCDWWSVGVI-------LFEMLVGQPP 247 (381)
T ss_pred CCCccceeehhhH-------HHHHHhCCCC
Confidence 9999999999988 7777888764
No 96
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.93 E-value=2.1e-27 Score=276.41 Aligned_cols=147 Identities=18% Similarity=0.209 Sum_probs=126.7
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||.||++.+. .++..+|+|.+.... ......+. +|+.+++.++||||+++
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~i~~~ 67 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHK------ETGLFAAAKIIQIES--EEELEDFM--------VEIDILSECKHPNIVGL 67 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEc------CCCcEEEEEEEeeCC--HHHHHHHH--------HHHHHHHhCCCCceeEE
Confidence 467999999999999999998753 467889999986532 22223344 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+..+...|+||||+++ +|.+++... ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .++|
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~--~~~l 144 (280)
T cd06611 68 YEAYFYENKLWILIEFCDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDG--DVKL 144 (280)
T ss_pred EEEEecCCeEEEEeeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCC--CEEE
Confidence 9999999999999999997 999988742 34588999999999999999999999999999999999999988 7999
Q ss_pred cCcCCCC
Q 000399 320 CDKPLVG 326 (1566)
Q Consensus 320 ~DFGlA~ 326 (1566)
+|||++.
T Consensus 145 ~d~g~~~ 151 (280)
T cd06611 145 ADFGVSA 151 (280)
T ss_pred ccCccch
Confidence 9999876
No 97
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.93 E-value=2.8e-27 Score=277.43 Aligned_cols=149 Identities=20% Similarity=0.179 Sum_probs=123.0
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~l 240 (1566)
++|++.+.||+|+||.||+|.+. .++..||+|.+............+. +|+.+++.+. ||||+++
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~------~~~~~v~lK~~~~~~~~~~~~~~~~--------~E~~~l~~l~~~~~i~~~ 66 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDK------NTGKLVALKKTRLEMDEEGIPPTAL--------REISLLQMLSESIYIVRL 66 (295)
T ss_pred CCceEeeEecccCCeEEEEEEEC------CCCcEEEEEeehhhccccCCchHHH--------HHHHHHHHccCCCCccce
Confidence 36899999999999999998863 4688999998765432222222233 5999999995 6999999
Q ss_pred cccccccCc-----eeeeccCCccchhhhhccCc---ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc-
Q 000399 241 LGLLKTSGL-----ITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD- 311 (1566)
Q Consensus 241 ~~~~~~~~~-----l~LV~E~~~gsL~~~l~~~~---~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~- 311 (1566)
++++...+. .|+||||++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+||+++.
T Consensus 67 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~ 146 (295)
T cd07837 67 LDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQ 146 (295)
T ss_pred eeeEeecCCCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecC
Confidence 999987665 89999999999988886422 235788899999999999999999999999999999999998
Q ss_pred cchhhhhhcCcCCCC
Q 000399 312 SCWSWLYICDKPLVG 326 (1566)
Q Consensus 312 ~~~~~vKL~DFGlA~ 326 (1566)
++ .+||+|||+++
T Consensus 147 ~~--~~kl~dfg~~~ 159 (295)
T cd07837 147 KG--LLKIADLGLGR 159 (295)
T ss_pred CC--eEEEeecccce
Confidence 66 79999999876
No 98
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.93 E-value=1.2e-27 Score=290.00 Aligned_cols=210 Identities=15% Similarity=0.182 Sum_probs=166.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++++.||+|+||.||+|++. .++..||||++.+...........+. +|+.+|+.++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~-------~E~~il~~l~h~~iv~~~ 67 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKK------DTGHIYAMKKLRKSEMLEKEQVAHVR-------AERDILAEADNPWVVKLY 67 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhCCCCCCcceE
Confidence 36999999999999999998863 46889999999865332222222222 699999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+++.+|+||||+++ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~~g~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~--~~kl~ 143 (364)
T cd05599 68 YSFQDENYLYLIMEYLPGGDMMTLLMK--KDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKG--HIKLS 143 (364)
T ss_pred EEEEcCCeEEEEECCCCCcHHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEe
Confidence 999999999999999986 99999973 44689999999999999999999999999999999999999998 79999
Q ss_pred CcCCCCccccccccCC-----C---------------CCCce-------eeeecCCcccccccccccccccchhhccccc
Q 000399 321 DKPLVGFNSIADWCTI-----P---------------TSPMI-------GCCIEGCSSQGLYADLKLSQSMDWHSQFNRW 373 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~-----~---------------~~~~~-------~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~W 373 (1566)
|||+++.......... . ..... .......+||+.|+|||++.+..++..+|+|
T Consensus 144 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 223 (364)
T cd05599 144 DFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWW 223 (364)
T ss_pred ecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeee
Confidence 9999875432110000 0 00000 0011234699999999999998999999999
Q ss_pred cccccCCchhhhHHHhhccccc
Q 000399 374 WRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 374 s~G~isnfeyL~~ln~~agrs~ 395 (1566)
+.|++ .+..+.|+.+
T Consensus 224 SlG~i-------l~el~~G~~P 238 (364)
T cd05599 224 SLGVI-------MYEMLVGYPP 238 (364)
T ss_pred cchhH-------HHHhhcCCCC
Confidence 99988 7777788764
No 99
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.93 E-value=2.5e-27 Score=276.71 Aligned_cols=149 Identities=15% Similarity=0.197 Sum_probs=125.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++++.||+|+||.||+|++. .++..+|+|.+... .......++. +|+.+++.++||||++++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~~~a~k~~~~~-~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~ 65 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHR------PTGVTMAMKEIRLE-LDESKFNQII--------MELDILHKAVSPYIVDFY 65 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEc------CCCcEEEEEEeecc-cCHHHHHHHH--------HHHHHHHhcCCCcHHhhh
Confidence 36899999999999999998863 46889999988643 2222223444 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCc-ccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhhhh
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~-~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+.+...+.+|+||||+++ +|..++.... ...+++..++.++.|++.||.|||+ .||+||||||+||+++.++ .+|
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--~~~ 143 (286)
T cd06622 66 GAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNG--QVK 143 (286)
T ss_pred hheecCCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCC--CEE
Confidence 999999999999999997 9988887421 2357888999999999999999997 5999999999999999988 799
Q ss_pred hcCcCCCCc
Q 000399 319 ICDKPLVGF 327 (1566)
Q Consensus 319 L~DFGlA~~ 327 (1566)
|+|||+++.
T Consensus 144 l~dfg~~~~ 152 (286)
T cd06622 144 LCDFGVSGN 152 (286)
T ss_pred EeecCCccc
Confidence 999998863
No 100
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=8.8e-27 Score=270.34 Aligned_cols=136 Identities=21% Similarity=0.237 Sum_probs=117.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-----CC
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-----HP 235 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-----Hp 235 (1566)
..+|.++++||.|-|++||+|.|. ...+.||+|+.+..+...+ +++.||.+|++++ |+
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDt------q~~r~VAlKVvKSAqhYtE-----------aAlDEIklL~~v~~~Dp~~~ 139 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDT------QNKRYVALKVVKSAQHYTE-----------AALDEIKLLQQVREGDPNDP 139 (590)
T ss_pred CceEEEEEeccccccceeEEEeec------cCCeEEEEEEEehhhHHHH-----------HHHHHHHHHHHHHhcCCCCC
Confidence 368999999999999999999973 6789999999875432222 4567999999884 33
Q ss_pred ---CcccccccccccC----ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCc
Q 000399 236 ---NVAPVLGLLKTSG----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNV 307 (1566)
Q Consensus 236 ---NIV~l~~~~~~~~----~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NI 307 (1566)
.||+|++.|...+ ++|||+|+++.+|..+|.++..+.++...++.|++||+.||.|||+ .||||-||||+||
T Consensus 140 ~~~~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENv 219 (590)
T KOG1290|consen 140 GKKCVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENV 219 (590)
T ss_pred CCceeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCccee
Confidence 6999999997653 8999999999999999998888889999999999999999999998 7999999999999
Q ss_pred cccccc
Q 000399 308 LLTDSC 313 (1566)
Q Consensus 308 Ll~~~~ 313 (1566)
|+..+.
T Consensus 220 Ll~~~e 225 (590)
T KOG1290|consen 220 LLCSTE 225 (590)
T ss_pred eeeccc
Confidence 998773
No 101
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=6.1e-28 Score=301.86 Aligned_cols=201 Identities=16% Similarity=0.145 Sum_probs=171.7
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||+|..++++ .++.+||+|++.+....++....++. .|-.+|..-+.+.||++
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k------~t~~VYAMK~lnK~eMlKr~~tA~F~-------EERDimv~~ns~Wiv~L 140 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHK------STEKVYAMKILNKWEMLKRAETACFR-------EERDIMVFGNSEWIVQL 140 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEee------ccccchhHHHhhHHHHhhchhHHHHH-------HHhHHHHcCCcHHHHHH
Confidence 458999999999999999998874 68999999999987666555545554 58899999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
+.+|+++.++|+||||++| +|..++.. ...+++..++||+..|+.||.-||+.|+|||||||+||||+..| ++||
T Consensus 141 hyAFQD~~~LYlVMdY~pGGDlltLlSk--~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~G--HikL 216 (1317)
T KOG0612|consen 141 HYAFQDERYLYLVMDYMPGGDLLTLLSK--FDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSG--HIKL 216 (1317)
T ss_pred HHHhcCccceEEEEecccCchHHHHHhh--cCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccC--cEee
Confidence 9999999999999999997 99999984 33789999999999999999999999999999999999999999 8999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc----c-cchhhccccccccccCCchhhhHHHhhcccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ----S-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~----~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+|||.+-..... .. ..+...+|||-|.+||++. + ..|+..||+|+.|++ .++++-|.+
T Consensus 217 ADFGsClkm~~d--------G~--V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~-------~YEMlyG~T 279 (1317)
T KOG0612|consen 217 ADFGSCLKMDAD--------GT--VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVF-------MYEMLYGET 279 (1317)
T ss_pred ccchhHHhcCCC--------Cc--EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHH-------HHHHHcCCC
Confidence 999987644411 01 1234567999999999995 2 568899999999987 778888866
Q ss_pred c
Q 000399 395 W 395 (1566)
Q Consensus 395 ~ 395 (1566)
+
T Consensus 280 P 280 (1317)
T KOG0612|consen 280 P 280 (1317)
T ss_pred c
Confidence 3
No 102
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.93 E-value=3.5e-27 Score=283.68 Aligned_cols=146 Identities=25% Similarity=0.298 Sum_probs=121.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++.+.||+|+||.||+|.+. .++..||+|.+..... ...+.+. +|+.+|+.++||||+++
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~------~~~~~v~iK~i~~~~~--~~~~~~~--------~Ei~~l~~l~h~~i~~~ 67 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDS------DCDKRVAVKKIVLTDP--QSVKHAL--------REIKIIRRLDHDNIVKV 67 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEEC------CCCcEEEEEEEecCCC--chHHHHH--------HHHHHHHhcCCCcchhh
Confidence 468999999999999999998863 5788999999865432 2222333 59999999999999999
Q ss_pred ccccccc--------------CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCC
Q 000399 241 LGLLKTS--------------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSN 306 (1566)
Q Consensus 241 ~~~~~~~--------------~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~N 306 (1566)
++++... ...|+||||++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~N 144 (342)
T cd07854 68 YEVLGPSGSDLTEDVGSLTELNSVYIVQEYMETDLANVLE---QGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPAN 144 (342)
T ss_pred HhhhcccccccccccccccccceEEEEeecccccHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHH
Confidence 9887654 3579999999999988886 2357888999999999999999999999999999999
Q ss_pred ccccccchhhhhhcCcCCCC
Q 000399 307 VLLTDSCWSWLYICDKPLVG 326 (1566)
Q Consensus 307 ILl~~~~~~~vKL~DFGlA~ 326 (1566)
|+++.++. .+||+|||+++
T Consensus 145 ili~~~~~-~~kl~dfg~~~ 163 (342)
T cd07854 145 VFINTEDL-VLKIGDFGLAR 163 (342)
T ss_pred EEEcCCCc-eEEECCcccce
Confidence 99985442 68999999876
No 103
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.93 E-value=1.4e-27 Score=290.97 Aligned_cols=209 Identities=15% Similarity=0.170 Sum_probs=164.1
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++++.||+|+||.||+|+++ .++..+|+|++.+.........+.+. +|+.+|+.++||||+++++
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~------~~~~~~avK~~~~~~~~~~~~~~~~~-------~E~~il~~l~h~~iv~~~~ 68 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKV------DTNALYAMKTLRKADVLMRNQAAHVK-------AERDILAEADNEWVVKLYY 68 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEEC------CCCCEEEEEEEcHHHHHhhhhHHHHH-------HHHHHHHhCCCCCcceEEE
Confidence 6999999999999999998863 46889999998764332222222222 6999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+.+++.+|+||||+++ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 69 ~~~~~~~~~lv~E~~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~--~ikL~D 144 (376)
T cd05598 69 SFQDKDNLYFVMDYIPGGDMMSLLIR--LGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG--HIKLTD 144 (376)
T ss_pred EEEcCCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCC--CEEEEe
Confidence 99999999999999986 99999973 45578889999999999999999999999999999999999998 799999
Q ss_pred cCCCCccccccc---cCC---------------C--C------------CCceeeeecCCcccccccccccccccchhhc
Q 000399 322 KPLVGFNSIADW---CTI---------------P--T------------SPMIGCCIEGCSSQGLYADLKLSQSMDWHSQ 369 (1566)
Q Consensus 322 FGlA~~~~~~~~---~~~---------------~--~------------~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~ 369 (1566)
||+|+....... ... . . .....+......||+.|||||++.+..++..
T Consensus 145 FG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 224 (376)
T cd05598 145 FGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQL 224 (376)
T ss_pred CCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcc
Confidence 999863211000 000 0 0 0000011234579999999999999999999
Q ss_pred cccccccccCCchhhhHHHhhccccc
Q 000399 370 FNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 370 ~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|+|+.|++ .+..+.|+.+
T Consensus 225 ~DiwSlGvi-------lyell~G~~P 243 (376)
T cd05598 225 CDWWSVGVI-------LYEMLVGQPP 243 (376)
T ss_pred eeeeeccce-------eeehhhCCCC
Confidence 999999998 5556667653
No 104
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.93 E-value=4.4e-27 Score=283.02 Aligned_cols=150 Identities=22% Similarity=0.292 Sum_probs=124.9
Q ss_pred hhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCc
Q 000399 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 237 (1566)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNI 237 (1566)
+...++|++++.||+|+||.||+|.+. .++..||+|.+.+..........+. +|+.+|+.++||||
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i 76 (343)
T cd07880 11 WEVPDRYRDLKQVGSGAYGTVCSALDR------RTGAKVAIKKLYRPFQSELFAKRAY--------RELRLLKHMKHENV 76 (343)
T ss_pred hccccceEEEEEeeecCCeEEEEEEEC------CCCcEEEEEEecccccchHHHHHHH--------HHHHHHHhcCCCCc
Confidence 345678999999999999999998753 5688999999865322222122233 59999999999999
Q ss_pred ccccccccccC------ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc
Q 000399 238 APVLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1566)
Q Consensus 238 V~l~~~~~~~~------~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~ 311 (1566)
+++++++.... .+++||||++++|.+++. ...+++..++.++.||+.||.|||++||+||||||+||+++.
T Consensus 77 v~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~ 153 (343)
T cd07880 77 IGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMK---HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNE 153 (343)
T ss_pred cceeeeecCCccccccceEEEEEecCCCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC
Confidence 99999987654 458999999779988886 235788899999999999999999999999999999999999
Q ss_pred cchhhhhhcCcCCCC
Q 000399 312 SCWSWLYICDKPLVG 326 (1566)
Q Consensus 312 ~~~~~vKL~DFGlA~ 326 (1566)
++ .+||+|||+++
T Consensus 154 ~~--~~kl~dfg~~~ 166 (343)
T cd07880 154 DC--ELKILDFGLAR 166 (343)
T ss_pred CC--CEEEeeccccc
Confidence 88 79999999876
No 105
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.93 E-value=7.3e-27 Score=281.03 Aligned_cols=148 Identities=24% Similarity=0.320 Sum_probs=125.1
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..++|++.+.||+|+||.||+|++. .++..+|+|.+............+. +|+.+++.++||||++
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~ 78 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDT------KTGRKVAIKKLSRPFQSAIHAKRTY--------RELRLLKHMDHENVIG 78 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEEC------CCCcEEEEEecccccchhhHHHHHH--------HHHHHHHhccCCCHHH
Confidence 3568999999999999999998863 4678899998765322222222233 5999999999999999
Q ss_pred ccccccccCc------eeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc
Q 000399 240 VLGLLKTSGL------ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 240 l~~~~~~~~~------l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~ 313 (1566)
+++++...+. +|+|+||++++|.+++.. ..+++..++.++.|++.||.|||++||+||||||+||+++.++
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~ 155 (343)
T cd07851 79 LLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDC 155 (343)
T ss_pred HHHHhhccccccccccEEEEEecCCCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC
Confidence 9998876654 899999998899999873 4578899999999999999999999999999999999999988
Q ss_pred hhhhhhcCcCCCC
Q 000399 314 WSWLYICDKPLVG 326 (1566)
Q Consensus 314 ~~~vKL~DFGlA~ 326 (1566)
.+||+|||++.
T Consensus 156 --~~kL~dfg~~~ 166 (343)
T cd07851 156 --ELKILDFGLAR 166 (343)
T ss_pred --CEEEccccccc
Confidence 79999999986
No 106
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.92 E-value=4.6e-27 Score=281.43 Aligned_cols=194 Identities=17% Similarity=0.195 Sum_probs=164.0
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+|++++.||+|+||.||+|++. .++..||+|++.+...... ....+. +|+.+|..++||||++++
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~iv~~~ 67 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKK------DTGEIVALKRMKKSLLFKLNEVRHVL--------TERDILTTTKSEWLVKLL 67 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhHHHHHH--------HHHHHHHhCCCCCCccEE
Confidence 6999999999999999998863 4678999999986533221 222233 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++...+..|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~g~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~kL~ 143 (333)
T cd05600 68 YAFQDDEYLYLAMEYVPGGDFRTLLNN--LGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG--HIKLT 143 (333)
T ss_pred EEEEcCCEEEEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--CEEEE
Confidence 999999999999999987 99999973 44578899999999999999999999999999999999999998 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++.... ......||+.|+|||++.+..++...|+|+.|++ .+.++.|+.+
T Consensus 144 Dfg~a~~~~~--------------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~i-------l~ell~g~~p 197 (333)
T cd05600 144 DFGLSKGIVT--------------YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCM-------LYEFLCGFPP 197 (333)
T ss_pred eCcCCccccc--------------ccCCcccCccccChhHhcCCCCCCccceecchHH-------HhhhhhCCCC
Confidence 9999985442 1123358899999999998899999999999988 6677777664
No 107
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.92 E-value=4.2e-27 Score=282.92 Aligned_cols=197 Identities=17% Similarity=0.156 Sum_probs=163.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccc-cchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~-~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|.++ ...+..+|+|.+.+........ ..+. +|+.+|+.++||||++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~Iv~ 95 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYK-----NEDFPPVAIKRFEKSKIIKQKQVDHVF--------SERKILNYINHPFCVN 95 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEE-----CCCCeEEEEEEEEHHHhhhhhhHHHHH--------HHHHHHHhCCCCCCcc
Confidence 568999999999999999998742 1234689999987654322222 2222 6999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++++.+.+.+|+||||+++ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 96 ~~~~~~~~~~~~lv~Ey~~~g~L~~~i~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~--~ik 171 (340)
T PTZ00426 96 LYGSFKDESYLYLVLEFVIGGEFFTFLRR--NKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG--FIK 171 (340)
T ss_pred eEEEEEeCCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC--CEE
Confidence 99999999999999999986 99999973 44578889999999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||+++..... .....||+.|+|||++.+..++..+|+|+.|++ .+.+++|+.+
T Consensus 172 L~DFG~a~~~~~~--------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi-------l~ell~G~~P 227 (340)
T PTZ00426 172 MTDFGFAKVVDTR--------------TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIF-------IYEILVGCPP 227 (340)
T ss_pred EecCCCCeecCCC--------------cceecCChhhcCHHHHhCCCCCccccccchhhH-------HHHHhcCCCC
Confidence 9999999854310 012248899999999998888999999999988 7777788764
No 108
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.92 E-value=9.8e-27 Score=271.16 Aligned_cols=148 Identities=16% Similarity=0.183 Sum_probs=123.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.+.|++.+.||+|+||.||+|.+. .++..+|+|++..... ...++. +|+.+++++ +||||++
T Consensus 15 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~a~K~~~~~~~---~~~~~~--------~e~~~l~~~~~h~~i~~ 77 (282)
T cd06636 15 AGIFELVEVVGNGTYGQVYKGRHV------KTGQLAAIKVMDVTED---EEEEIK--------LEINMLKKYSHHRNIAT 77 (282)
T ss_pred hhhhhhheeeccCCCeEEEEEEEc------CCCcEEEEEEEecChH---HHHHHH--------HHHHHHHHhcCCCcEEE
Confidence 457999999999999999998863 5678899999765321 112222 478888888 6999999
Q ss_pred ccccccc------cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 240 VLGLLKT------SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 240 l~~~~~~------~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
+++++.. ...+|+||||+++ +|.+++.......+++..++.++.||+.||.|||++||+||||||+||+++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~ 157 (282)
T cd06636 78 YYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTEN 157 (282)
T ss_pred EeeehhcccccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 9999853 4578999999987 99999975445557788889999999999999999999999999999999999
Q ss_pred chhhhhhcCcCCCCc
Q 000399 313 CWSWLYICDKPLVGF 327 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~ 327 (1566)
+ .++|+|||+++.
T Consensus 158 ~--~~~l~dfg~~~~ 170 (282)
T cd06636 158 A--EVKLVDFGVSAQ 170 (282)
T ss_pred C--CEEEeeCcchhh
Confidence 8 799999998763
No 109
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.92 E-value=2.9e-26 Score=259.24 Aligned_cols=223 Identities=21% Similarity=0.288 Sum_probs=201.0
Q ss_pred cccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeeeeehhhhhcc-CcceeeeecCcceEEEeeccCCCcccce
Q 000399 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHH-GALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1566)
Q Consensus 1279 ~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~~l~tl~gH~-~~V~slafspd~~~LaSgS~~~~~D~tV 1355 (1566)
...|...|++ .|++|.| ++||+.||.|++|+..-+.++.+.+|. ..|++++|+|++..|+|+|. |++|
T Consensus 134 lQaHDs~Vr~m~ws~~g~w-----miSgD~gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDskF~t~Sd----Dg~i 204 (464)
T KOG0284|consen 134 LQAHDSPVRTMKWSHNGTW-----MISGDKGGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSD----DGTI 204 (464)
T ss_pred hhhhcccceeEEEccCCCE-----EEEcCCCceEEecccchhhhHHhhHhhhhhhheeccCCCCceeEEecC----CCeE
Confidence 3459999998 7999999 999999999999999988888887776 99999999999999999998 9999
Q ss_pred eeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCC
Q 000399 1356 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1433 (1566)
Q Consensus 1356 rlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~ 1433 (1566)
+|||....+..+.+.||.-.|.|++|+|..+.|+|+ |..|++||.++|+|+.++..|
T Consensus 205 kiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~H--------------------- 263 (464)
T KOG0284|consen 205 KIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGH--------------------- 263 (464)
T ss_pred EEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhhhhhhc---------------------
Confidence 999999998889999999999999999999999988 999999999999999988765
Q ss_pred CCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCC
Q 000399 1434 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSE 1513 (1566)
Q Consensus 1434 ~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~ 1513 (1566)
...|..+.|+|+ +++|+|+|.|..++++|+++.+.+.++++| ...|+++.++|-.
T Consensus 264 ---------KntVl~~~f~~n----------~N~Llt~skD~~~kv~DiR~mkEl~~~r~H------kkdv~~~~WhP~~ 318 (464)
T KOG0284|consen 264 ---------KNTVLAVKFNPN----------GNWLLTGSKDQSCKVFDIRTMKELFTYRGH------KKDVTSLTWHPLN 318 (464)
T ss_pred ---------cceEEEEEEcCC----------CCeeEEccCCceEEEEehhHhHHHHHhhcc------hhhheeecccccc
Confidence 556888999987 899999999999999999999999999987 4557888888755
Q ss_pred cccCCCcccchhHHHhccCCCceeEEeeccCceeEEee-ccCceeeEeeeeccC
Q 000399 1514 KMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR-AHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1514 ~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~-gH~~~V~~VafspdG 1566 (1566)
. .++++|+.||.|..|.+...+.+..+. +|++.|.+++|+|-|
T Consensus 319 ~----------~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlG 362 (464)
T KOG0284|consen 319 E----------SLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLG 362 (464)
T ss_pred c----------cceeeccCCCceEEEeccccccccCCCcccccceeeeeccccc
Confidence 3 489999999999999999777776664 899999999999965
No 110
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.92 E-value=1.8e-26 Score=276.42 Aligned_cols=157 Identities=15% Similarity=0.223 Sum_probs=126.2
Q ss_pred hccccc-ceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc--ccchhhhc--CCCCCCCCCCCCcccCC
Q 000399 161 MTALFP-IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE--SKNFLRLI--GVPSFDESSVPGCLRHP 235 (1566)
Q Consensus 161 ~~~y~~-~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~--~~~~l~~~--g~~~~rEi~iL~~l~Hp 235 (1566)
.++|.. .+.||+|+||+||+|.+. .++..+|+|.+......... ..+..... -....+|+.+++.++||
T Consensus 7 ~~ry~~~~~~ig~G~~g~vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 80 (335)
T PTZ00024 7 SERYIQKGAHLGEGTYGKVEKAYDT------LTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHE 80 (335)
T ss_pred ccchhhhhhcccCCCceeEEEEEEC------CCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCc
Confidence 457765 577999999999999863 46889999998754322110 00000000 00123699999999999
Q ss_pred CcccccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 236 NVAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 236 NIV~l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
||+++++++...+..|+||||++++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++
T Consensus 81 ~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~--~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~-- 156 (335)
T PTZ00024 81 NIMGLVDVYVEGDFINLVMDIMASDLKKVVDR--KIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKG-- 156 (335)
T ss_pred ceeeeeEEEecCCcEEEEEeccccCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCC--
Confidence 99999999999999999999999999999873 34578889999999999999999999999999999999999998
Q ss_pred hhhhcCcCCCCc
Q 000399 316 WLYICDKPLVGF 327 (1566)
Q Consensus 316 ~vKL~DFGlA~~ 327 (1566)
.+||+|||+++.
T Consensus 157 ~~kl~dfg~~~~ 168 (335)
T PTZ00024 157 ICKIADFGLARR 168 (335)
T ss_pred CEEECCccceee
Confidence 799999999874
No 111
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2.9e-27 Score=271.71 Aligned_cols=200 Identities=16% Similarity=0.124 Sum_probs=172.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+.|+.-+.||+|+||+||-|+- ..+|+.+|.|.+.+..+.....+.. ++.|-.+|.+++.|.||.+-
T Consensus 185 n~F~~~RvlGkGGFGEV~acqv------raTGKMYAcKkL~KKRiKkr~ge~m-------aLnEk~iL~kV~s~FiVsla 251 (591)
T KOG0986|consen 185 NTFRVYRVLGKGGFGEVCACQV------RATGKMYACKKLDKKRIKKRKGETM-------ALNEKQILEKVSSPFIVSLA 251 (591)
T ss_pred cceeeeEEEecccccceeEEEE------ecchhhHHHHHHHHHHHHHhhhhHH-------hhHHHHHHHHhccCcEEEEe
Confidence 3688899999999999997764 3689999999998765443322221 24699999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
.+|++.+.+|+||..|.| +|.-.|....+..+++..+++|+.||+.||++||+.+||+|||||+|||+|+.| +++|+
T Consensus 252 YAfeTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~G--hvRIS 329 (591)
T KOG0986|consen 252 YAFETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHG--HVRIS 329 (591)
T ss_pred eeecCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCC--CeEee
Confidence 999999999999999997 999999866666799999999999999999999999999999999999999999 89999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|+|........ ..+-+||..|||||++.+..|+...|+|+.||+ ++++++|+++
T Consensus 330 DLGLAvei~~g~~------------~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCl-------lYemi~G~sP 385 (591)
T KOG0986|consen 330 DLGLAVEIPEGKP------------IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCL-------LYEMIAGHSP 385 (591)
T ss_pred ccceEEecCCCCc------------cccccCcccccCHHHHcCCcccCCccHHHHHhH-------HHHHHcccCc
Confidence 9999987653111 122259999999999999999999999999988 8999999986
No 112
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.92 E-value=5e-27 Score=285.49 Aligned_cols=200 Identities=17% Similarity=0.211 Sum_probs=163.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+++++ .++..+|+|++.+.........+.+. +|+.+++.++||||+++
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~i~~~~~hp~iv~~ 108 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHK------SSQKVYAMKLLSKFEMIKRSDSAFFW-------EERDIMAFANSPWVVQL 108 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhhHHHHH-------HHHHHHHhCCCCCEeeE
Confidence 468999999999999999998863 46889999998764333322222332 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.+++.+|+||||+++ +|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 109 ~~~~~~~~~~~lv~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~--~~kL 183 (370)
T cd05621 109 FCAFQDDKYLYMVMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHG--HLKL 183 (370)
T ss_pred EEEEEcCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC--CEEE
Confidence 9999999999999999986 99999963 3478889999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc----hhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD----WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~----y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+|+....... .......||+.|+|||++.+.. ++..+|+|+.|++ .+.+++|+.+
T Consensus 184 ~DFG~a~~~~~~~~----------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~i-------lyell~G~~P 246 (370)
T cd05621 184 ADFGTCMKMDETGM----------VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF-------LFEMLVGDTP 246 (370)
T ss_pred EecccceecccCCc----------eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHH-------HHHHHhCCCC
Confidence 99999986431100 0112345899999999987543 6789999999988 7777888764
No 113
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.92 E-value=6.6e-27 Score=283.31 Aligned_cols=210 Identities=15% Similarity=0.158 Sum_probs=165.4
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++++.||+|+||.||+|+++ .++..+|+|++.+.........+.+. +|+.++..++||||++++
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~l~~~~iv~~~ 67 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKK------DTGHIYAMKILRKADMLEKEQVAHIR-------AERDILVEADGAWVVKMF 67 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHHhhhhhHHHHH-------HHHHHHHhCCCCCEeeEE
Confidence 36899999999999999998863 56889999999764332222222222 588999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+.+.+.+|+||||+++ +|.+++.. ...+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~E~~~gg~L~~~l~~--~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~--~vkL~ 143 (360)
T cd05627 68 YSFQDKRNLYLIMEFLPGGDMMTLLMK--KDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKG--HVKLS 143 (360)
T ss_pred EEEEcCCEEEEEEeCCCCccHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCC--CEEEe
Confidence 999999999999999997 99999973 45588999999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCC----CCCC--------------------ceeeeecCCcccccccccccccccchhhcccccccc
Q 000399 321 DKPLVGFNSIADWCTI----PTSP--------------------MIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~----~~~~--------------------~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G 376 (1566)
|||+++.......... .... .........+||+.|+|||++.+..++..+|+|+.|
T Consensus 144 DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlG 223 (360)
T cd05627 144 DFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLG 223 (360)
T ss_pred eccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceecccc
Confidence 9999875432100000 0000 000011234689999999999999999999999999
Q ss_pred ccCCchhhhHHHhhccccc
Q 000399 377 ELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 377 ~isnfeyL~~ln~~agrs~ 395 (1566)
++ .+.++.|+.+
T Consensus 224 vi-------lyel~tG~~P 235 (360)
T cd05627 224 VI-------MYEMLIGYPP 235 (360)
T ss_pred ce-------eeecccCCCC
Confidence 98 5666677654
No 114
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.92 E-value=1.1e-25 Score=252.79 Aligned_cols=277 Identities=18% Similarity=0.255 Sum_probs=218.9
Q ss_pred ccccccccccccccchHHHHHHhhccccCCCceeccCCCCCCCCCcccccccCccCCCCceEeeeeehhhhhccCcceee
Q 000399 1254 KNLIPQRRVYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSV 1333 (1566)
Q Consensus 1254 ~~~i~~~~~~~le~~~~~~~~~~~~~~~H~~~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~~l~tl~gH~~~V~sl 1333 (1566)
.++|....+.++|+..............|.+||-+..-.+.+ |+||++||++++||.++....++.||+++|.++
T Consensus 76 ~kgiSsE~~leIEYv~~~~aP~pl~~~~hdDWVSsv~~~~~~-----IltgsYDg~~riWd~~Gk~~~~~~Ght~~ik~v 150 (423)
T KOG0313|consen 76 EKGISSEEILEIEYVEAITAPKPLQCFLHDDWVSSVKGASKW-----ILTGSYDGTSRIWDLKGKSIKTIVGHTGPIKSV 150 (423)
T ss_pred HcCcChhheeEEEEEEecCCCCccccccchhhhhhhcccCce-----EEEeecCCeeEEEecCCceEEEEecCCcceeee
Confidence 455566677777777666666666677899999876544666 999999999999999999999999999999999
Q ss_pred eecCc---ceEEEeeccCCCcccceeeEEecccc----cccccccccccccceEEeecCCceeec--cCcEEEeecC---
Q 000399 1334 AVGQD---ECTVFTAGIGPGFKGTVQKWELTRIN----CVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQ--- 1401 (1566)
Q Consensus 1334 afspd---~~~LaSgS~~~~~D~tVrlWDl~tg~----~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~--- 1401 (1566)
+|.-. .+.|+|||. |+++++|.++.++ ++..-.||++.|.+|+..++|.+++|+ |.+|+||+..
T Consensus 151 ~~v~~n~~~~~fvsas~----Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~ 226 (423)
T KOG0313|consen 151 AWVIKNSSSCLFVSASM----DQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDE 226 (423)
T ss_pred EEEecCCccceEEEecC----CceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCc
Confidence 99653 346999998 9999999998764 334446999999999999999999887 9999999932
Q ss_pred ----------------------CCcEEEEeeccccc----------ccccCCCCCcccccccCCCCCCCCcccccccccc
Q 000399 1402 ----------------------TGKLLSVFAEQSMD----------SLHGGSPSSSISKINTDQVGMLNSNTLSSGILST 1449 (1566)
Q Consensus 1402 ----------------------tg~~l~~l~~h~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~sv 1449 (1566)
++.++.++.+|... ++..++.+..++.|+....+.......+...+++
T Consensus 227 ~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~~~ksl~~i 306 (423)
T KOG0313|consen 227 EDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTLTTNKSLNCI 306 (423)
T ss_pred cccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCCCceEeecccceEEEEEeecccceeeeecCcceeEe
Confidence 22345556666543 3344555666666666655554444445566666
Q ss_pred cccchhHHHhhhhhccceEEEEecCceEEEEEccCCc---eeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhH
Q 000399 1450 AFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQ---KLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSW 1526 (1566)
Q Consensus 1450 afsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~---~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~ 1526 (1566)
+++|. .++|++|+.|..||+||.|++. ..++|.+ |.++|.++.++|.+.+ .
T Consensus 307 ~~~~~----------~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~g------H~nwVssvkwsp~~~~----------~ 360 (423)
T KOG0313|consen 307 SYSPL----------SKLLASGSSDRHIRLWDPRTGDGSVVSQSLIG------HKNWVSSVKWSPTNEF----------Q 360 (423)
T ss_pred ecccc----------cceeeecCCCCceeecCCCCCCCceeEEeeec------chhhhhheecCCCCce----------E
Confidence 66665 8999999999999999999863 3344554 5789999999998875 7
Q ss_pred HHhccCCCceeEEeeccCc-eeEEeeccCceeeEeeeecc
Q 000399 1527 IAAGLSSGQCRLFDVRSGN-VIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1527 LaSGs~Dg~I~lWD~~sgk-~l~~l~gH~~~V~~Vafspd 1565 (1566)
+++||.|+++++||+|+-+ +++.+.+|+..|.++.|+..
T Consensus 361 ~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~ 400 (423)
T KOG0313|consen 361 LVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEG 400 (423)
T ss_pred EEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCC
Confidence 8999999999999999888 99999999999999999753
No 115
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.92 E-value=1.9e-26 Score=266.45 Aligned_cols=148 Identities=17% Similarity=0.219 Sum_probs=124.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|.++ .++..+++|++..... ...++. +|+.+++++ +||||++
T Consensus 5 ~~~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~---~~~~~~--------~e~~~l~~~~~h~~i~~ 67 (275)
T cd06608 5 TGIFELVEVIGEGTYGKVYKARHK------KTGQLVAIKIMDIIED---EEEEIK--------EEYNILRKYSNHPNIAT 67 (275)
T ss_pred hhheeheeeecCCCCeEEEEEEEC------CCCcEEEEEEEecCch---hHHHHH--------HHHHHHHHhcCCCChhe
Confidence 578999999999999999998863 4578899999875432 122333 588999998 6999999
Q ss_pred ccccccccC------ceeeeccCCcc-chhhhhccCc--ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccc
Q 000399 240 VLGLLKTSG------LITSVIPKTPY-TLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310 (1566)
Q Consensus 240 l~~~~~~~~------~l~LV~E~~~g-sL~~~l~~~~--~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~ 310 (1566)
+++++.... .+|+||||+++ +|.+++.... ...+++..++.++.|++.||.|||++|++||||+|+||+++
T Consensus 68 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~ 147 (275)
T cd06608 68 FYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT 147 (275)
T ss_pred EEEEEEecCCCCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc
Confidence 999997644 48999999997 9999887433 35678889999999999999999999999999999999999
Q ss_pred ccchhhhhhcCcCCCCc
Q 000399 311 DSCWSWLYICDKPLVGF 327 (1566)
Q Consensus 311 ~~~~~~vKL~DFGlA~~ 327 (1566)
.++ .+||+|||++..
T Consensus 148 ~~~--~~~l~d~~~~~~ 162 (275)
T cd06608 148 KNA--EVKLVDFGVSAQ 162 (275)
T ss_pred cCC--eEEECCCcccee
Confidence 988 799999998863
No 116
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.92 E-value=1.1e-26 Score=279.63 Aligned_cols=210 Identities=16% Similarity=0.166 Sum_probs=167.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++++.||+|+||.||+|++. .++..||+|++.+.........+.+. +|+.+|..++||||++++
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~~~ 67 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDK------DTGQVYAMKVLRKSDMIKRNQIAHVR-------AERDILADADSPWIVKLY 67 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEEC------CCCCEEEEEEEEHHHHhhccHHHHHH-------HHHHHHHhcCCCCccchh
Confidence 36999999999999999998863 46889999999865433322222222 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+++.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~--~~kL~ 143 (350)
T cd05573 68 YSFQDEEHLYLVMEYMPGGDLMNLLIR--KDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADG--HIKLA 143 (350)
T ss_pred hheecCCeEEEEEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEee
Confidence 999999999999999986 99999974 35688999999999999999999999999999999999999998 79999
Q ss_pred CcCCCCccccccccC------------------CCCCCceeeeecCCcccccccccccccccchhhccccccccccCCch
Q 000399 321 DKPLVGFNSIADWCT------------------IPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 382 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~------------------~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfe 382 (1566)
|||+++......... ...............||+.|+|||++.+..++...|+|+.|++
T Consensus 144 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~i---- 219 (350)
T cd05573 144 DFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVI---- 219 (350)
T ss_pred cCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchh----
Confidence 999998644321000 0000000011234468999999999999999999999999988
Q ss_pred hhhHHHhhccccc
Q 000399 383 YLLFLNKLAGRRW 395 (1566)
Q Consensus 383 yL~~ln~~agrs~ 395 (1566)
.+..+.|+.+
T Consensus 220 ---l~ell~g~~P 229 (350)
T cd05573 220 ---LYEMLYGFPP 229 (350)
T ss_pred ---hhhhccCCCC
Confidence 6777778764
No 117
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.92 E-value=8.1e-27 Score=273.05 Aligned_cols=197 Identities=15% Similarity=0.100 Sum_probs=163.4
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
|+..+.||+|+||+||+|.+. .++..+|+|.+.+....... ...++ +|+.+|+.++|+||+++++
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~iv~~~~ 67 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVR------ATGKMYACKKLEKKRIKKRKGEAMAL--------NEKRILEKVNSRFVVSLAY 67 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEe------cCCceEEEEEeeHhhhhhhhhHHHHH--------HHHHHHHhcCCCcEEEEEE
Confidence 788999999999999998863 57899999998765432221 12233 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+.+.+++||||+++ +|.+++.......+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 68 ~~~~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~--~~kl~D 145 (285)
T cd05631 68 AYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRG--HIRISD 145 (285)
T ss_pred EEccCCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC--CEEEee
Confidence 99999999999999996 998888644444578889999999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++...... ......||..|+|||++.+..|+...|+|+.|++ .+..+.|+.+
T Consensus 146 fg~~~~~~~~~------------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvi-------l~el~~g~~p 200 (285)
T cd05631 146 LGLAVQIPEGE------------TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCL-------IYEMIQGQSP 200 (285)
T ss_pred CCCcEEcCCCC------------eecCCCCCCCccCHhhhcCCCCCcccCchhHHHH-------HHHHHhCCCC
Confidence 99997543110 0122358899999999999899999999999987 6777788764
No 118
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.92 E-value=1.3e-26 Score=256.11 Aligned_cols=196 Identities=17% Similarity=0.222 Sum_probs=157.9
Q ss_pred hccccc-ceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCcc
Q 000399 161 MTALFP-IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVA 238 (1566)
Q Consensus 161 ~~~y~~-~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV 238 (1566)
.+-|++ .+.||+|+|+.|--|.. +.++..+|||++.+. ...... +.+||++++.+++ |+||+
T Consensus 76 ~d~YkLt~e~LGeGAyasVqtcv~------i~t~~EYAVKiidKq--~gHsR~--------RvfREVe~f~~Cqgh~nil 139 (463)
T KOG0607|consen 76 EDMYKLTSELLGEGAYASVQTCVS------IQTGKEYAVKIIDKQ--PGHSRS--------RVFREVETFYQCQGHKNIL 139 (463)
T ss_pred HHHHHhHHHHhcCccceeeeeeee------eccchhhhhhhhhcC--CchHHH--------HHHHHHHHHHHhcCCccHH
Confidence 344665 67899999999998775 578999999999875 333333 3347999999995 99999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch-hh
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SW 316 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~-~~ 316 (1566)
+|+++|++++.+|||||.|.| .|...|. ++.-+++.++..++..|+.||++||.+||.||||||+|||-..... .-
T Consensus 140 qLiefFEdd~~FYLVfEKm~GGplLshI~--~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsP 217 (463)
T KOG0607|consen 140 QLIEFFEDDTRFYLVFEKMRGGPLLSHIQ--KRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSP 217 (463)
T ss_pred HHHHHhcccceEEEEEecccCchHHHHHH--HhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCc
Confidence 999999999999999999997 8888887 4667999999999999999999999999999999999999876553 46
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-----ccchhhcccccccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-----SMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-----~~~y~~~~d~Ws~G~i 378 (1566)
+|||||-++.-.......+...++.. .+-+|+..|||||+.. ...|++.+|.|+.|+|
T Consensus 218 vKiCDfDLgSg~k~~~~~spastP~L----~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvI 280 (463)
T KOG0607|consen 218 VKICDFDLGSGIKLNNDCSPASTPEL----LTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVI 280 (463)
T ss_pred eeeeccccccccccCCCCCCCCCccc----cCcccchhhcchhHHhhhccccccccccccHHHHHHH
Confidence 89999999875443222222233322 2345888999999863 4568999999999998
No 119
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2.5e-26 Score=253.71 Aligned_cols=203 Identities=18% Similarity=0.174 Sum_probs=176.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
..+|.+++.||+|+|++|.+++.+ .+.+++|+|+++++-....+...+.+ .|-.+.... +||.+|-
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~------~t~qiyamkvvkkel~nddedidwvq-------tek~vfe~asn~pflvg 315 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLK------KTDQIYAMKVVKKELVNDDEDIDWVQ-------TEKHVFEQASNNPFLVG 315 (593)
T ss_pred cccceeeeeecCcchhhhhheehc------ccceeeehhhHHHHhcCCcccchhHH-------hhHHHHHhccCCCeEEe
Confidence 568999999999999999999874 67899999999987666665566665 566666555 6999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
|+.+|+++..+++|.||++| +|.-.++ ....+++.++++|..+|+.||.|||++|||+||||.+|+|++..| ++|
T Consensus 316 lhscfqtesrlffvieyv~ggdlmfhmq--rqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeg--hik 391 (593)
T KOG0695|consen 316 LHSCFQTESRLFFVIEYVNGGDLMFHMQ--RQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEG--HIK 391 (593)
T ss_pred hhhhhcccceEEEEEEEecCcceeeehh--hhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCC--cee
Confidence 99999999999999999997 8887777 344589999999999999999999999999999999999999999 899
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccccCCc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDY 398 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~dl 398 (1566)
|+|+|+++....... ...+++|||-|.|||++.+.+|+-.+|+|..|++ ++++.+||++.|+
T Consensus 392 ltdygmcke~l~~gd-----------~tstfcgtpnyiapeilrgeeygfsvdwwalgvl-------mfemmagrspfdi 453 (593)
T KOG0695|consen 392 LTDYGMCKEGLGPGD-----------TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVL-------MFEMMAGRSPFDI 453 (593)
T ss_pred ecccchhhcCCCCCc-----------ccccccCCCcccchhhhcccccCceehHHHHHHH-------HHHHHcCCCCcce
Confidence 999999997553211 1234569999999999999999999999999987 8999999998764
No 120
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.92 E-value=1.6e-26 Score=277.05 Aligned_cols=203 Identities=18% Similarity=0.212 Sum_probs=172.2
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
....|.+.+.||+|.|++|.++++. .++..||||++.+..........+. ||+++|+.++|||||+
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~------~t~~~VaiK~idkt~ln~~~~~k~~--------rev~imk~l~HPnIvk 119 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHI------LTGTEVAIKIIDKTQLNPSKRQKLG--------REVDIMKSLNHPNIVK 119 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEec------CCCceEEEEEehhcccChHHHHHHH--------HHHHHHHhcCCcceee
Confidence 3668999999999999999999974 5789999999998766655444433 7999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
++.+.+++..+|+||||+.+ .+++++. +.+...+..++.++.|+++|++|||+++|+|||||++||||+.+. .+|
T Consensus 120 l~~v~~t~~~lylV~eya~~ge~~~yl~--~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~m--nik 195 (596)
T KOG0586|consen 120 LFSVIETEATLYLVMEYASGGELFDYLV--KHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENM--NIK 195 (596)
T ss_pred eeeeeeecceeEEEEEeccCchhHHHHH--hcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccccccc--cee
Confidence 99999999999999999986 9999998 455677899999999999999999999999999999999999999 599
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhh-ccccccccccCCchhhhHHHhhcccccCC
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS-QFNRWWRGELSNFEYLLFLNKLAGRRWGD 397 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~-~~d~Ws~G~isnfeyL~~ln~~agrs~~d 397 (1566)
|+|||++..... .. ...+.+|++.|.|||++.+..|+. .+|.|+.|++ .+-...|.-+.|
T Consensus 196 IaDfgfS~~~~~--------~~----~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvv-------ly~LV~GsLPFD 256 (596)
T KOG0586|consen 196 IADFGFSTFFDY--------GL----MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVV-------LYALVEGSLPFD 256 (596)
T ss_pred eeccccceeecc--------cc----cccccCCCCCccChHhhcCcccCCcceehhhhhhh-------heeeeecccccC
Confidence 999999986552 11 123345999999999999999864 9999999998 444566665555
Q ss_pred cc
Q 000399 398 YT 399 (1566)
Q Consensus 398 l~ 399 (1566)
..
T Consensus 257 G~ 258 (596)
T KOG0586|consen 257 GQ 258 (596)
T ss_pred Cc
Confidence 43
No 121
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=9.4e-27 Score=249.98 Aligned_cols=203 Identities=17% Similarity=0.176 Sum_probs=163.2
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
...+.|+.+.+||+|.||+||+|+.+ .+++.||+|++.-+.... =+|++++||+.+|..++|+|++
T Consensus 14 ~~~~~yek~~kigqGtfgeVFkAr~~------n~~kkvalkkvlmeneKe--------GfpitalreikiL~~lkHenv~ 79 (376)
T KOG0669|consen 14 DEVSKYEKLAKIGQGTFGEVFKARSK------NTGKKVALKKVLMENEKE--------GFPITALREIKILQLLKHENVV 79 (376)
T ss_pred ecchHHHHHHhcCCchHHHHHHHhhc------CccchhHHHHHHHhcccc--------CCcHHHHHHHHHHHHhcchhHH
Confidence 34568999999999999999999974 567778988765422111 1466788999999999999999
Q ss_pred ccccccccc--------CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccc
Q 000399 239 PVLGLLKTS--------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310 (1566)
Q Consensus 239 ~l~~~~~~~--------~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~ 310 (1566)
.+++.|.+. ..+|+||.+|+.+|..+|.. +...++..+++.++.+++.||.|+|+..|+|||+||+|+||+
T Consensus 80 nliEic~tk~Tp~~r~r~t~ylVf~~cehDLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt 158 (376)
T KOG0669|consen 80 NLIEICRTKATPTNRDRATFYLVFDFCEHDLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLIT 158 (376)
T ss_pred HHHHHHhhccCCcccccceeeeeHHHhhhhHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEc
Confidence 999988643 25999999999999999974 445689999999999999999999999999999999999999
Q ss_pred ccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-ccchhhccccccccccCCchhhhHHHh
Q 000399 311 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFLNK 389 (1566)
Q Consensus 311 ~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~y~~~~d~Ws~G~isnfeyL~~ln~ 389 (1566)
.++ .+||+|||+||........ ..++ -+.-+-|.+|++||.+. ..+|+..+|+|..||| .-.+
T Consensus 159 ~dg--ilklADFGlar~fs~~~n~---~kpr----ytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCi-------maeM 222 (376)
T KOG0669|consen 159 KDG--ILKLADFGLARAFSTSKNV---VKPR----YTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCI-------MAEM 222 (376)
T ss_pred CCc--eEEeeccccccceeccccc---CCCC----cccceeeeecCCHHHhhcccccCCcchhHhHHHH-------HHHH
Confidence 999 7999999999865432221 1121 11224688999999765 5679999999999998 5556
Q ss_pred hcc
Q 000399 390 LAG 392 (1566)
Q Consensus 390 ~ag 392 (1566)
+.+
T Consensus 223 wtr 225 (376)
T KOG0669|consen 223 WTR 225 (376)
T ss_pred Hcc
Confidence 554
No 122
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=1.4e-25 Score=238.13 Aligned_cols=254 Identities=16% Similarity=0.246 Sum_probs=205.3
Q ss_pred hccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCccc
Q 000399 1277 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1277 ~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~ 1353 (1566)
+....|.+.|++ |+-||++ .+++|.|++|++||+..+ +++++.||...|.+++.+.|+..|++|+. |+
T Consensus 11 ~~l~~~qgaV~avryN~dGnY-----~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~Gg----Dk 81 (307)
T KOG0316|consen 11 SILDCAQGAVRAVRYNVDGNY-----CLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGG----DK 81 (307)
T ss_pred eeecccccceEEEEEccCCCE-----EEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCC----Cc
Confidence 445678899998 8999999 999999999999998765 89999999999999999999999999998 99
Q ss_pred ceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCC--cEEEEeeccccc---------ccccC
Q 000399 1354 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG--KLLSVFAEQSMD---------SLHGG 1420 (1566)
Q Consensus 1354 tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg--~~l~~l~~h~~~---------~~~~~ 1420 (1566)
.|.+||+.||+.++.+.||.+.|+.|.|+.+...++|| |.++++||-++. ++++++....+. .+..+
T Consensus 82 ~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~heIvaG 161 (307)
T KOG0316|consen 82 AVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEHEIVAG 161 (307)
T ss_pred eEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEecccEEEee
Confidence 99999999999999999999999999999999999988 999999999864 577776554332 12233
Q ss_pred CCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCc
Q 000399 1421 SPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGF 1500 (1566)
Q Consensus 1421 ~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~ 1500 (1566)
+.++....++.+...+. ..-.+.+|+|+.|+++ |+..++++.|++||+.|-.+|+.+..+++|.+.-
T Consensus 162 S~DGtvRtydiR~G~l~-sDy~g~pit~vs~s~d----------~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~e-- 228 (307)
T KOG0316|consen 162 SVDGTVRTYDIRKGTLS-SDYFGHPITSVSFSKD----------GNCSLASSLDSTLRLLDKETGKLLKSYKGHKNME-- 228 (307)
T ss_pred ccCCcEEEEEeecceee-hhhcCCcceeEEecCC----------CCEEEEeeccceeeecccchhHHHHHhcccccce--
Confidence 33333333333332221 1224566777777765 9999999999999999999999999999995421
Q ss_pred hhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCce-eeEeeeecc
Q 000399 1501 PSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY-VTKVRIISK 1565 (1566)
Q Consensus 1501 ~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~-V~~Vafspd 1565 (1566)
.=..-|+ +.....+++||+||.|.+||+..+..+..+..|+.. |+.++++|.
T Consensus 229 --ykldc~l-----------~qsdthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~ 281 (307)
T KOG0316|consen 229 --YKLDCCL-----------NQSDTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPT 281 (307)
T ss_pred --eeeeeee-----------cccceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccC
Confidence 1111223 333457999999999999999999999999999988 899999984
No 123
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2.8e-26 Score=275.65 Aligned_cols=203 Identities=20% Similarity=0.214 Sum_probs=164.0
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|.....||+|+||.||+|. +.++..||||.+....... .++|.+ |+.+|.+++|||||+|
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~-------l~~~~~vAVK~~~~~~~~~--~~eF~~--------Ei~~ls~l~H~Nlv~L 136 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGV-------LSDGTVVAVKRLSSNSGQG--EREFLN--------EVEILSRLRHPNLVKL 136 (361)
T ss_pred HhCCchhcceecCCCeEEEEEE-------ECCCCEEEEEEecCCCCcc--hhHHHH--------HHHHHhcCCCcCcccE
Confidence 4589999999999999999766 4677999999876543221 455774 9999999999999999
Q ss_pred cccccccC-ceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhc---cccCCCccCCCccccccchh
Q 000399 241 LGLLKTSG-LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL---GIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 241 ~~~~~~~~-~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~---gIiHrDLKp~NILl~~~~~~ 315 (1566)
+|||.+.+ ..+||+||+++ +|.+.|......+++-.....|+.++++||.|||.. .||||||||+|||||++.
T Consensus 137 lGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~-- 214 (361)
T KOG1187|consen 137 LGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDF-- 214 (361)
T ss_pred EEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCC--
Confidence 99999988 59999999995 999999854332554444566999999999999994 399999999999999998
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
..||+|||+|+..... . ... .....||..|+|||.......+.+.|+|+.|++ .++.++||..
T Consensus 215 ~aKlsDFGLa~~~~~~-~-----~~~----~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVv-------llElitgr~~ 277 (361)
T KOG1187|consen 215 NAKLSDFGLAKLGPEG-D-----TSV----STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVV-------LLELITGRKA 277 (361)
T ss_pred CEEccCccCcccCCcc-c-----cce----eeecCCCCccCChhhhccCCcCcccccccchHH-------HHHHHhCCcc
Confidence 7999999999754420 0 000 000048888999999998888999999999988 7888999976
Q ss_pred CCcc
Q 000399 396 GDYT 399 (1566)
Q Consensus 396 ~dl~ 399 (1566)
-|..
T Consensus 278 ~d~~ 281 (361)
T KOG1187|consen 278 VDQS 281 (361)
T ss_pred cCCC
Confidence 5543
No 124
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=6e-27 Score=274.25 Aligned_cols=185 Identities=16% Similarity=0.172 Sum_probs=156.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeec-ccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEG-KASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..|.-++.||.|+||.||-|++. .+..+||||.+... +...+...+++ .|+.+|++++|||+|.+
T Consensus 26 klf~dLrEIGHGSFGAVYfArd~------~n~evVAIKKMsySGKQs~EKWqDIl--------KEVrFL~~l~HPntieY 91 (948)
T KOG0577|consen 26 KLFSDLREIGHGSFGAVYFARDV------RNSEVVAIKKMSYSGKQSNEKWQDIL--------KEVRFLRQLRHPNTIEY 91 (948)
T ss_pred HHHHHHHHhcCCccceeEEeecc------CccceeeeeeccccccccHHHHHHHH--------HHHHHHHhccCCCcccc
Confidence 35788999999999999999874 57899999998753 22233334445 59999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
-|+|..+...|||||||-|+-.|++.- ..+++-+-++..|..+.+.||.|||+.+.||||||..|||+++.| .|||+
T Consensus 92 kgCyLre~TaWLVMEYClGSAsDlleV-hkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g--~VKLa 168 (948)
T KOG0577|consen 92 KGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPG--LVKLA 168 (948)
T ss_pred cceeeccchHHHHHHHHhccHHHHHHH-HhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCC--eeeec
Confidence 999999999999999999977776653 245678888999999999999999999999999999999999999 89999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCccccccccccccc---ccchhhcccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~y~~~~d~Ws~G~i 378 (1566)
|||.|.... -..+++|||+|||||++. ...|+..+|+|+.|.-
T Consensus 169 DFGSAsi~~---------------PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGIT 214 (948)
T KOG0577|consen 169 DFGSASIMA---------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 214 (948)
T ss_pred cccchhhcC---------------chhcccCCccccchhHheeccccccCCccceeeccch
Confidence 999987533 134567999999999885 5569999999999953
No 125
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.92 E-value=2.5e-26 Score=271.29 Aligned_cols=199 Identities=19% Similarity=0.254 Sum_probs=161.0
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|+++ .++..+|+|++....... ....+. +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~niv~~ 68 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSK------VNGKLVALKVIRLQEEEG-TPFTAI--------REASLLKGLKHANIVLL 68 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEEC------CCCCEEEEEEeccccccc-cchhHH--------HHHHHHhhCCCCCcCeE
Confidence 468999999999999999998863 468889999987542211 111222 69999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++++.+++..|+||||++++|.+++... .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~--~~kl~ 145 (303)
T cd07869 69 HDIIHTKETLTLVFEYVHTDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTG--ELKLA 145 (303)
T ss_pred EEEEecCCeEEEEEECCCcCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEC
Confidence 9999999999999999999998888743 34578888999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... ......+++.|+|||++.+ ..++..+|+|+.|++ .+..+.|+.+
T Consensus 146 Dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i-------l~~l~~g~~p 203 (303)
T cd07869 146 DFGLARAKSVPSH-----------TYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCI-------FVEMIQGVAA 203 (303)
T ss_pred CCCcceeccCCCc-----------cCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHH-------HHHHHhCCCC
Confidence 9999875331100 0112347889999998865 457888999999987 6667777643
No 126
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.92 E-value=1.7e-26 Score=280.99 Aligned_cols=200 Identities=18% Similarity=0.207 Sum_probs=162.7
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|+++ .++..+|+|++.+.........+.+. +|+.+++.++||||+++
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~e~~i~~~~~hp~iv~~ 108 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHK------STRKVYAMKLLSKFEMIKRSDSAFFW-------EERDIMAFANSPWVVQL 108 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEC------CCCcEEEEEEEEHHHhhhhHHHHHHH-------HHHHHHHhCCCCCCCeE
Confidence 468999999999999999998863 57889999998764332222222222 58899999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.+++.+|+||||+++ +|.++++. ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 109 ~~~~~~~~~~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~--~ikL 183 (371)
T cd05622 109 FYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKL 183 (371)
T ss_pred EEEEEcCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCC--CEEE
Confidence 9999999999999999986 99999873 3478888999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc----hhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD----WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~----y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++....... . ......||+.|+|||++.+.. ++..+|+|+.|++ .+.++.|+.+
T Consensus 184 ~DfG~a~~~~~~~~------~----~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvi-------lyell~G~~P 246 (371)
T cd05622 184 ADFGTCMKMNKEGM------V----RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF-------LYEMLVGDTP 246 (371)
T ss_pred EeCCceeEcCcCCc------c----cccCcccCccccCHHHHhccCCCccCCCccceeehhHH-------HHHHHhCCCC
Confidence 99999985432100 0 012345899999999986543 7789999999988 6777788764
No 127
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.92 E-value=1.9e-26 Score=280.53 Aligned_cols=200 Identities=17% Similarity=0.188 Sum_probs=162.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|+++ .++..+|+|++.+.........+.+. +|+.+|+.++||||+++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~il~~~~h~~iv~~ 108 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHK------SSKQVYAMKLLSKFEMIKRSDSAFFW-------EERDIMAHANSEWIVQL 108 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhhHHHHH-------HHHHHHHhCCCCCcceE
Confidence 568999999999999999998863 56889999999764333222222222 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.+.+.+|+||||+++ +|.+++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 109 ~~~~~~~~~~~lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~--~~kL 183 (370)
T cd05596 109 HYAFQDDKYLYMVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSG--HLKL 183 (370)
T ss_pred EEEEecCCEEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCC--CEEE
Confidence 9999999999999999986 99999863 3478888999999999999999999999999999999999998 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc----chhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM----DWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~----~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++........ ......||+.|+|||++.+. .++..+|+|+.|++ .+..++|+.+
T Consensus 184 ~DfG~~~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvi-------lyelltG~~P 246 (370)
T cd05596 184 ADFGTCMKMDANGMV----------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVF-------LYEMLVGDTP 246 (370)
T ss_pred EeccceeeccCCCcc----------cCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHH-------HHHHHhCCCC
Confidence 999999754311000 01223589999999998653 37789999999987 6777788764
No 128
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.92 E-value=8e-26 Score=249.82 Aligned_cols=236 Identities=18% Similarity=0.275 Sum_probs=194.2
Q ss_pred CceeccCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecc
Q 000399 1284 PWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR 1362 (1566)
Q Consensus 1284 ~~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~t 1362 (1566)
.-|+|+..|... +++|..|++|+|||.++- ++..+.||+|+|.|+.+ |...++|||. |.||+|||+.+
T Consensus 198 kgVYClQYDD~k-----iVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqy--d~rviisGSS----DsTvrvWDv~t 266 (499)
T KOG0281|consen 198 KGVYCLQYDDEK-----IVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQY--DERVIVSGSS----DSTVRVWDVNT 266 (499)
T ss_pred CceEEEEecchh-----hhcccccCceEEeccccHHHHHhhhcCCCcEEeeec--cceEEEecCC----CceEEEEeccC
Confidence 445555555444 999999999999999875 88999999999999998 4669999998 99999999999
Q ss_pred cccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcE---EEEeecccc---------cccccCCCCCcccc
Q 000399 1363 INCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKL---LSVFAEQSM---------DSLHGGSPSSSISK 1428 (1566)
Q Consensus 1363 g~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~---l~~l~~h~~---------~~~~~~~~~~~~~~ 1428 (1566)
|+++.++-+|.+.|..+.|+. +++++| |.+|.+||+.+-.- .+++.+|.. ..+.+++++..++.
T Consensus 267 ge~l~tlihHceaVLhlrf~n--g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~kyIVsASgDRTikv 344 (499)
T KOG0281|consen 267 GEPLNTLIHHCEAVLHLRFSN--GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKV 344 (499)
T ss_pred CchhhHHhhhcceeEEEEEeC--CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccccceEEEecCCceEEE
Confidence 999999999999999999854 677777 99999999975432 223334332 24566777778888
Q ss_pred cccCCCCCCC-CcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHh
Q 000399 1429 INTDQVGMLN-SNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1507 (1566)
Q Consensus 1429 ~~~~~~~~~~-~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv 1507 (1566)
|+......+. +.+|..+|.|+.+. |+++++||+|.+||+||+..|.+++.++|| ...|++|
T Consensus 345 W~~st~efvRtl~gHkRGIAClQYr------------~rlvVSGSSDntIRlwdi~~G~cLRvLeGH------EeLvRci 406 (499)
T KOG0281|consen 345 WSTSTCEFVRTLNGHKRGIACLQYR------------DRLVVSGSSDNTIRLWDIECGACLRVLEGH------EELVRCI 406 (499)
T ss_pred Eeccceeeehhhhcccccceehhcc------------CeEEEecCCCceEEEEeccccHHHHHHhch------HHhhhhe
Confidence 8887776654 57889999998887 679999999999999999999999999987 7789999
Q ss_pred hccCCCcccCCCcccchhHHHhccCCCceeEEeeccCc---------eeEEeeccCceeeEeeee
Q 000399 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN---------VIASWRAHDGYVTKVRII 1563 (1566)
Q Consensus 1508 ~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk---------~l~~l~gH~~~V~~Vafs 1563 (1566)
.|+. +.|++|..||.|++||+.++. ++.++-.|++.|-.+.|.
T Consensus 407 RFd~-------------krIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQFD 458 (499)
T KOG0281|consen 407 RFDN-------------KRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQFD 458 (499)
T ss_pred eecC-------------ceeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEeec
Confidence 9853 579999999999999998765 445556688888887774
No 129
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=99.91 E-value=3.2e-25 Score=241.18 Aligned_cols=219 Identities=17% Similarity=0.240 Sum_probs=178.4
Q ss_pred cccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccce
Q 000399 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1566)
Q Consensus 1279 ~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tV 1355 (1566)
+..|+..|.. .++||++ .+++|+|+++++||+.++ ..+.|.||...|.+++|++|+..++|||. |+||
T Consensus 59 ~~GHsH~v~dv~~s~dg~~-----alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSr----DkTi 129 (315)
T KOG0279|consen 59 LTGHSHFVSDVVLSSDGNF-----ALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSR----DKTI 129 (315)
T ss_pred eeccceEecceEEccCCce-----EEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCC----ccee
Confidence 3457777776 6999998 999999999999999986 77889999999999999999999999998 9999
Q ss_pred eeEEeccccccccccc--ccccccceEEeecC--Cceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCccccc
Q 000399 1356 QKWELTRINCVSGYYG--HEEVVNDICVLSSS--GRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI 1429 (1566)
Q Consensus 1356 rlWDl~tg~~i~tl~g--H~~~V~sVafsp~g--~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~ 1429 (1566)
++|++- |.|..++.. |.+.|+|++|+|.. ..|+|+ |++||+||+++.+...++-+|
T Consensus 130 klwnt~-g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh----------------- 191 (315)
T KOG0279|consen 130 KLWNTL-GVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGH----------------- 191 (315)
T ss_pred eeeeec-ccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccc-----------------
Confidence 999976 445555533 38899999999994 467777 999999999988888777664
Q ss_pred ccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhc
Q 000399 1430 NTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICA 1509 (1566)
Q Consensus 1430 ~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~ 1509 (1566)
++.++.++++|+ |..+++|+.||.+.+||++.++++..+. +...|.++||
T Consensus 192 -------------~~~v~t~~vSpD----------GslcasGgkdg~~~LwdL~~~k~lysl~-------a~~~v~sl~f 241 (315)
T KOG0279|consen 192 -------------SGYVNTVTVSPD----------GSLCASGGKDGEAMLWDLNEGKNLYSLE-------AFDIVNSLCF 241 (315)
T ss_pred -------------cccEEEEEECCC----------CCEEecCCCCceEEEEEccCCceeEecc-------CCCeEeeEEe
Confidence 455777777766 9999999999999999999999988775 3556788888
Q ss_pred cCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeec----c-----CceeeEeeeeccC
Q 000399 1510 CGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA----H-----DGYVTKVRIISKR 1566 (1566)
Q Consensus 1510 s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~g----H-----~~~V~~VafspdG 1566 (1566)
+|.. -||+.+... .|+|||+.++.++..++- - +-.-.+++|++||
T Consensus 242 spnr-----------ywL~~at~~-sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG 295 (315)
T KOG0279|consen 242 SPNR-----------YWLCAATAT-SIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADG 295 (315)
T ss_pred cCCc-----------eeEeeccCC-ceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCC
Confidence 7664 466555444 499999999999888752 1 1223578899887
No 130
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.91 E-value=2.4e-26 Score=274.37 Aligned_cols=192 Identities=18% Similarity=0.196 Sum_probs=157.8
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCcccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~ 246 (1566)
+.||+|+||.||+++++ .++..||+|++.+...... ....+. +|+.+++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~hp~i~~~~~~~~~ 66 (323)
T cd05595 1 KLLGKGTFGKVILVREK------ATGRYYAMKILRKEVIIAKDEVAHTV--------TESRVLQNTRHPFLTALKYAFQT 66 (323)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhHHHHHHH--------HHHHHHHhCCCCCCcceeeEEec
Confidence 47999999999998863 5788999999886432222 222223 58999999999999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
.+.+|+||||+++ +|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 67 ~~~~~lv~E~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--~~kL~Dfg~~ 142 (323)
T cd05595 67 HDRLCFVMEYANGGELFFHLSR--ERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG--HIKITDFGLC 142 (323)
T ss_pred CCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCC--CEEecccHHh
Confidence 9999999999997 99888873 44678999999999999999999999999999999999999988 7999999998
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+...... .. .....||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 143 ~~~~~~~-----~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi-------l~ell~g~~P 194 (323)
T cd05595 143 KEGISDG-----AT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV-------MYEMMCGRLP 194 (323)
T ss_pred ccccCCC-----Cc------cccccCCcCcCCcccccCCCCCchhchhhhHHH-------HHHHHhCCCC
Confidence 7532100 00 112348899999999998889999999999988 6777778753
No 131
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=6.9e-26 Score=256.24 Aligned_cols=213 Identities=16% Similarity=0.114 Sum_probs=176.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
..+|..+..||+|+||.|.+|..+ .+...+|||+++++-+...+..+.. +.|-++|... +-|.+++
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerk------gtdELyAiKiLkKDViiQdDDvect-------m~EKrvLAL~~kppFL~q 414 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERK------GTDELYAIKILKKDVIIQDDDVECT-------MVEKRVLALPGKPPFLVQ 414 (683)
T ss_pred ecccceEEEeccCccceeeeeccc------CcchhhhhhhhccceeeecCcccce-------ehhhhheecCCCCchHHH
Confidence 458999999999999999998863 4678999999998866554433332 3588888777 4689999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
++.+|++-+.+|+||||+.| +|.-.|+ .-+.+.+..+.+|+.+|+-||-+||++|||+||||.+|||++.+| ++|
T Consensus 415 lHScFQTmDRLyFVMEyvnGGDLMyhiQ--Q~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eG--HiK 490 (683)
T KOG0696|consen 415 LHSCFQTMDRLYFVMEYVNGGDLMYHIQ--QVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG--HIK 490 (683)
T ss_pred HHHHhhhhhheeeEEEEecCchhhhHHH--HhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCC--ceE
Confidence 99999999999999999997 9988887 456689999999999999999999999999999999999999999 899
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccccCCc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDY 398 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~dl 398 (1566)
|+|||+++.+... ..+ ..+++|||-|+|||++...+|+..+|+|+.|++ ++++++|.++.|-
T Consensus 491 i~DFGmcKEni~~-----~~T------TkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVL-------LyEmlaGQpPFdG 552 (683)
T KOG0696|consen 491 IADFGMCKENIFD-----GVT------TKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL-------LYEMLAGQPPFDG 552 (683)
T ss_pred eeecccccccccC-----Ccc------eeeecCCCcccccceEEecccccchhHHHHHHH-------HHHHHcCCCCCCC
Confidence 9999999975521 111 123459999999999999999999999999987 8999999987553
Q ss_pred cc-eeecceeE
Q 000399 399 TF-HMVMPWVI 408 (1566)
Q Consensus 399 ~q-~pv~pwv~ 408 (1566)
.. ..+|.-|.
T Consensus 553 eDE~elF~aI~ 563 (683)
T KOG0696|consen 553 EDEDELFQAIM 563 (683)
T ss_pred CCHHHHHHHHH
Confidence 22 23444443
No 132
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.91 E-value=2.9e-26 Score=280.69 Aligned_cols=191 Identities=14% Similarity=0.139 Sum_probs=160.0
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++++.||+|+||.||+|++. .++..||+|..... .+. +|+++|+.++|||||++
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~------~~~~~vaiK~~~~~--------~~~--------~E~~il~~l~HpnIv~~ 148 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDN------KTCEHVVIKAGQRG--------GTA--------TEAHILRAINHPSIIQL 148 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEEC------CCCCEEEEechhhh--------hhH--------HHHHHHHhCCCCCCCCE
Confidence 347999999999999999999873 57888999974321 122 69999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++|......++|||++.++|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 149 ~~~~~~~~~~~lv~e~~~~~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~--~vkL~ 224 (391)
T PHA03212 149 KGTFTYNKFTCLILPRYKTDLYCYLAA--KRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPG--DVCLG 224 (391)
T ss_pred eEEEEECCeeEEEEecCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCC--CEEEE
Confidence 999999999999999999999988863 34578888999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|||+|+....... . ......||+.|+|||++.+..|+..+|+|+.|++ .+..+.|+.
T Consensus 225 DFG~a~~~~~~~~-----~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi-------l~elltg~~ 281 (391)
T PHA03212 225 DFGAACFPVDINA-----N-----KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIV-------LFEMATCHD 281 (391)
T ss_pred eCCcccccccccc-----c-----ccccccCccCCCChhhhcCCCCCcHHHHHHHHHH-------HHHHHHCCC
Confidence 9999975331100 0 0123358999999999998899999999999988 677777764
No 133
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.91 E-value=4.6e-26 Score=271.90 Aligned_cols=198 Identities=15% Similarity=0.140 Sum_probs=158.8
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
|++++.||+|+||.||+|.++ .++..||||++.+....... ...+.+ ..+++.+++.++||||+++++
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~l~~-----e~~~~~~~~~l~hp~i~~~~~ 69 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYK------KTGELYAIKALKKGDIIARDEVESLMC-----EKRIFETANSERHPFLVNLFA 69 (324)
T ss_pred CeEEEEEeecCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHHH-----HHHHHHhccccCCCChhceee
Confidence 678999999999999998763 56889999999865322222 122221 012344567788999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+.+.+|+||||+++ +|..++. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 70 ~~~~~~~~~lv~E~~~~~~L~~~~~---~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~--~~kL~D 144 (324)
T cd05589 70 CFQTEDHVCFVMEYAAGGDLMMHIH---TDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEG--FVKIAD 144 (324)
T ss_pred EEEcCCEEEEEEcCCCCCcHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCC--cEEeCc
Confidence 99999999999999997 9988876 34578999999999999999999999999999999999999998 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++....... ......|++.|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 145 fg~~~~~~~~~~-----------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~~G~~p 200 (324)
T cd05589 145 FGLCKEGMGFGD-----------RTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVL-------IYEMLVGESP 200 (324)
T ss_pred ccCCccCCCCCC-----------cccccccCccccCHhHhcCCCCCcccchhhHHHH-------HHHHHhCCCC
Confidence 999875332110 0122358899999999999889999999999988 6777778754
No 134
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.91 E-value=8.5e-26 Score=268.69 Aligned_cols=197 Identities=17% Similarity=0.100 Sum_probs=161.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+...+...||+|+||+||+|+. .-.||||+++......+..+.|.+ |+.++++-+|.||+-++
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~w---------hGdVAVK~Lnv~~pt~~qlqaFKn--------EVa~lkkTRH~NIlLFM 454 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRW---------HGDVAVKLLNVDDPTPEQLQAFKN--------EVAVLKKTRHENILLFM 454 (678)
T ss_pred HHhhccceeccccccceeeccc---------ccceEEEEEecCCCCHHHHHHHHH--------HHHHHhhcchhhheeee
Confidence 4677899999999999999985 355899999987777666666664 99999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
|++..+.. .||+-+|+| +|+.+|+-. +..|.....+.|++||++||.|||.++|||||||..||++.+++ .|||+
T Consensus 455 G~~~~p~~-AIiTqwCeGsSLY~hlHv~-etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~--kVkIg 530 (678)
T KOG0193|consen 455 GACMNPPL-AIITQWCEGSSLYTHLHVQ-ETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDL--KVKIG 530 (678)
T ss_pred hhhcCCce-eeeehhccCchhhhhccch-hhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCC--cEEEe
Confidence 99988876 899999999 999999853 45578888899999999999999999999999999999999998 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc---cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS---MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~---~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||++..-....... +. ..-.|...|||||++.. .+|+.+.|+|+.|++ .++.++|--+
T Consensus 531 DFGLatvk~~w~g~~-q~--------~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV-------~YELltg~lP 592 (678)
T KOG0193|consen 531 DFGLATVKTRWSGEQ-QL--------EQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIV-------WYELLTGELP 592 (678)
T ss_pred cccceeeeeeecccc-cc--------CCCccchhhhcHHHHhhcccCCCCcccchhhhhHH-------HHHHHhCcCC
Confidence 999997433211000 00 11126677999999863 458889999999988 7888888543
No 135
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.91 E-value=6.3e-26 Score=272.02 Aligned_cols=207 Identities=18% Similarity=0.185 Sum_probs=157.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|.+.- .....++..||+|++.... .......++ +|+.+|+.+ +||||++
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~~~~~~~vavK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~niv~ 75 (338)
T cd05102 6 RDRLRLGKVLGHGAFGKVVEASAFG-IDKKSSCNTVAVKMLKEGA-TASEHKALM--------SELKILIHIGNHLNVVN 75 (338)
T ss_pred hhHceeeeEeccCCcceEEEEEEec-cCCcccchhhheecccccc-chHHHHHHH--------HHHHHHHHhccCcceee
Confidence 3589999999999999999986411 1112456789999987532 222223344 599999999 8999999
Q ss_pred cccccccc-CceeeeccCCcc-chhhhhccCc------------------------------------------------
Q 000399 240 VLGLLKTS-GLITSVIPKTPY-TLENILQFSP------------------------------------------------ 269 (1566)
Q Consensus 240 l~~~~~~~-~~l~LV~E~~~g-sL~~~l~~~~------------------------------------------------ 269 (1566)
+++++... +.+++||||+++ +|.+++....
T Consensus 76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (338)
T cd05102 76 LLGACTKPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSG 155 (338)
T ss_pred EEeEecCCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCc
Confidence 99988764 468999999996 9999987421
Q ss_pred ------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCccccccccCCC
Q 000399 270 ------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIP 337 (1566)
Q Consensus 270 ------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~ 337 (1566)
...++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.........
T Consensus 156 ~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~--~~kl~DfG~a~~~~~~~~~~-- 231 (338)
T cd05102 156 STNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDPDYV-- 231 (338)
T ss_pred ccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCC--cEEEeecccccccccCcchh--
Confidence 12356677888999999999999999999999999999999988 79999999998543211000
Q ss_pred CCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-cccc
Q 000399 338 TSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRRW 395 (1566)
Q Consensus 338 ~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs~ 395 (1566)
......++..|+|||++.+..++...|+|+.|++ .+..++ |+.+
T Consensus 232 -------~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~i-------l~el~~~g~~p 276 (338)
T cd05102 232 -------RKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVL-------LWEIFSLGASP 276 (338)
T ss_pred -------cccCCCCCccccCcHHhhcCCCCcccCHHHHHHH-------HHHHHhCCCCC
Confidence 0112335678999999988889999999999987 566664 6543
No 136
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.91 E-value=3.1e-26 Score=274.32 Aligned_cols=201 Identities=15% Similarity=0.113 Sum_probs=161.1
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++++.||+|+||+||+++++ .++..+|+|++.+.........+.+. +|+.++..++||||++++
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~~~ 67 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMK------NTGQVYAMKILNKWEMLKRAETACFR-------EERDVLVNGDRRWITNLH 67 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhhHHHHH-------HHHHHHHhCCCCCCCceE
Confidence 36999999999999999998863 46889999999764332222222222 588899999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+++.+|+||||+++ +|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~--~~kl~ 144 (331)
T cd05597 68 YAFQDENNLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNG--HIRLA 144 (331)
T ss_pred EEEecCCeEEEEEecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCC--CEEEE
Confidence 999999999999999986 999999732 34578899999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-----cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-----MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-----~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... . ......||+.|+|||++.. ..++..+|+|+.|++ .+..+.|+.+
T Consensus 145 Dfg~~~~~~~~~~------~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~-------l~el~~g~~P 207 (331)
T cd05597 145 DFGSCLRLLADGT------V----QSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVC-------MYEMLYGETP 207 (331)
T ss_pred ECCceeecCCCCC------c----cccceeccccccCHHHHhhccccccCCCCcceeehhhhH-------HHHHhhCCCC
Confidence 9999875432100 0 0112348999999999863 346778999999988 6667777754
No 137
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=99.91 E-value=1.9e-24 Score=236.10 Aligned_cols=224 Identities=18% Similarity=0.235 Sum_probs=194.5
Q ss_pred hccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEee-eeehhhhhccCcceeeeecCcceEEEeeccCCCccc
Q 000399 1277 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1277 ~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~-~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~ 1353 (1566)
.+.-.|.+.|.+ +++|++. |+|+|.||.+.|||.-+ ++++.+.-....|..+||+|.|+++|+|+. |+
T Consensus 49 r~LkGH~~Ki~~~~ws~Dsr~-----ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGL----dN 119 (343)
T KOG0286|consen 49 RTLKGHLNKIYAMDWSTDSRR-----IVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGL----DN 119 (343)
T ss_pred EEecccccceeeeEecCCcCe-----EEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCc----Cc
Confidence 345569999998 7999998 99999999999999664 588888888999999999999999999998 99
Q ss_pred ceeeEEeccc------ccccccccccccccceEEeecCCce-eeccCcEEEeecCCCcEEEEeecccccccccCCCCCcc
Q 000399 1354 TVQKWELTRI------NCVSGYYGHEEVVNDICVLSSSGRI-ASCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSI 1426 (1566)
Q Consensus 1354 tVrlWDl~tg------~~i~tl~gH~~~V~sVafsp~g~~L-aSgDgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~ 1426 (1566)
..-||++.+. +..+.+.||++.+.|+.|.+++..| .|||.++-+||+++|+.+..|.+|
T Consensus 120 ~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH-------------- 185 (343)
T KOG0286|consen 120 KCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGH-------------- 185 (343)
T ss_pred eeEEEecccccccccceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCC--------------
Confidence 9999999754 4456789999999999998866665 577999999999999999998876
Q ss_pred cccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHH
Q 000399 1427 SKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSA 1506 (1566)
Q Consensus 1427 ~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~s 1506 (1566)
+.-|.+++++|. +++.+++|+-|++.++||+|.+.++.+|.+| ..-|++
T Consensus 186 ----------------~gDV~slsl~p~---------~~ntFvSg~cD~~aklWD~R~~~c~qtF~gh------esDINs 234 (343)
T KOG0286|consen 186 ----------------TGDVMSLSLSPS---------DGNTFVSGGCDKSAKLWDVRSGQCVQTFEGH------ESDINS 234 (343)
T ss_pred ----------------cccEEEEecCCC---------CCCeEEecccccceeeeeccCcceeEeeccc------ccccce
Confidence 445788888884 4899999999999999999999999999988 445677
Q ss_pred hhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccC---ceeeEeeeeccC
Q 000399 1507 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHD---GYVTKVRIISKR 1566 (1566)
Q Consensus 1507 v~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~---~~V~~VafspdG 1566 (1566)
|+|. |+|.-++|||+|+++|+||+|..+.+..+. |+ .+|++|+||-.|
T Consensus 235 v~ff-----------P~G~afatGSDD~tcRlyDlRaD~~~a~ys-~~~~~~gitSv~FS~SG 285 (343)
T KOG0286|consen 235 VRFF-----------PSGDAFATGSDDATCRLYDLRADQELAVYS-HDSIICGITSVAFSKSG 285 (343)
T ss_pred EEEc-----------cCCCeeeecCCCceeEEEeecCCcEEeeec-cCcccCCceeEEEcccc
Confidence 7776 555689999999999999999999999987 43 478999998765
No 138
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.91 E-value=4.6e-26 Score=272.37 Aligned_cols=200 Identities=15% Similarity=0.175 Sum_probs=162.8
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|+++ .++..+|+|++.+.........+.+. +|+.+++.++||||+++++
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~i~~~~~~~~i~~~~~ 68 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREK------ATGDIYAMKVMKKSVLLAQETVSFFE-------EERDILSISNSPWIPQLQY 68 (330)
T ss_pred CceEEEEEEeccCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhCCCCCCcceee
Confidence 6899999999999999998863 57889999999875443333333333 6889999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+.+.+|+||||+++ +|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 69 ~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~--~~kL~D 145 (330)
T cd05601 69 AFQDKDNLYLVMEYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTG--HIKLAD 145 (330)
T ss_pred EEecCCeEEEEECCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCC--CEEecc
Confidence 99999999999999986 999999743 24588999999999999999999999999999999999999998 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCccccccccccccc------ccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ------SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~------~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++........ ......||+.|+|||++. ...++..+|+|+.|++ .+..+.|+.+
T Consensus 146 fg~a~~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~i-------l~el~~g~~P 208 (330)
T cd05601 146 FGSAARLTANKMV----------NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVI-------AYEMIYGRSP 208 (330)
T ss_pred CCCCeECCCCCce----------eeecccCCccccCHHHhccccccccCCCCCcceeecccce-------eeeeccCCCC
Confidence 9999854321000 111234889999999986 4557788999999988 5566677653
No 139
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.91 E-value=3.8e-26 Score=273.57 Aligned_cols=201 Identities=15% Similarity=0.108 Sum_probs=161.5
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||+++++ .++..+|+|++.+.........+.+. +|+.++..++||||++++
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~l~ 67 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMK------HTERIYAMKILNKWEMLKRAETACFR-------EERNVLVNGDCQWITTLH 67 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEEC------CCCCEEEEEEEeHHHHHhhHHHHHHH-------HHHHHHHhCCCCCEeeEE
Confidence 36999999999999999998863 46788999998764322222222222 588889999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+.+..|+||||++| +|.+++... ...+++..++.++.|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~--~~kl~ 144 (331)
T cd05624 68 YAFQDENYLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNG--HIRLA 144 (331)
T ss_pred EEEEcCCEEEEEEeCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCC--CEEEE
Confidence 999999999999999986 999999742 34578889999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-----cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-----MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-----~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... .......||+.|+|||++.+ ..++..+|+|+.|++ .+.++.|+.+
T Consensus 145 DfG~a~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvi-------l~ell~g~~P 207 (331)
T cd05624 145 DFGSCLKMNQDGT----------VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVC-------MYEMLYGETP 207 (331)
T ss_pred eccceeeccCCCc----------eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehh-------hhhhhhCCCC
Confidence 9999975432100 00112348999999999875 457788999999988 6667778764
No 140
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.91 E-value=5.2e-26 Score=271.45 Aligned_cols=197 Identities=17% Similarity=0.136 Sum_probs=159.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcccCC-Ccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHP-NVAPV 240 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l~Hp-NIV~l 240 (1566)
+|++++.||+|+||.||+|+++ .++..||+|++.+..... .....++ +|+.++..++|+ +|+++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~ 66 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERK------GTDELYAIKILKKDVIIQDDDVECTM--------VEKRVLALPGKPPFLTQL 66 (324)
T ss_pred CceEEEEEeeccCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhcCCCCceeee
Confidence 5889999999999999998863 467889999998653322 2222233 588888888764 68889
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.+.+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~--~~kL 142 (324)
T cd05587 67 HSCFQTMDRLYFVMEYVNGGDLMYHIQQ--VGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEG--HIKI 142 (324)
T ss_pred EEEEEcCCEEEEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCC--CEEE
Confidence 9999999999999999986 99998873 44578889999999999999999999999999999999999998 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++..... ... .....||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 143 ~Dfg~~~~~~~~-----~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvi-------l~elltG~~p 200 (324)
T cd05587 143 ADFGMCKENIFG-----GKT------TRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL-------LYEMLAGQPP 200 (324)
T ss_pred eecCcceecCCC-----CCc------eeeecCCccccChhhhcCCCCCcccchhhhHHH-------HHHHHhCCCC
Confidence 999998743210 000 112248899999999999889999999999988 6677778765
No 141
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.91 E-value=5.8e-26 Score=265.36 Aligned_cols=199 Identities=17% Similarity=0.221 Sum_probs=161.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|+++ .++..+|+|++............+. +|+.+++.++||||+++++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~ 67 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHK------ETKEIVAIKKFKDSEENEEVKETTL--------RELKMLRTLKQENIVELKE 67 (287)
T ss_pred CceEEEEecccCCEEEEEEEEC------CCCcEEEEEEEecccccccchhhHH--------HHHHHHHhCCCccccchhh
Confidence 6999999999999999998863 4688899999876533322222233 5999999999999999999
Q ss_pred cccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
++..++.+|+||||+++++.+.+... ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+||
T Consensus 68 ~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~--~~kl~Df 144 (287)
T cd07848 68 AFRRRGKLYLVFEYVEKNMLELLEEM-PNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHND--VLKLCDF 144 (287)
T ss_pred hEecCCEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--cEEEeec
Confidence 99999999999999998555555422 34578888999999999999999999999999999999999988 7999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+++........ ......|++.|+|||++.+..++..+|+|+.|++ .+..++|+.+
T Consensus 145 g~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvi-------l~el~~g~~p 200 (287)
T cd07848 145 GFARNLSEGSNA----------NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCI-------LGELSDGQPL 200 (287)
T ss_pred cCcccccccccc----------cccccccccccCCcHHHcCCCCCCchhHHhHHHH-------HHHHHhCCCC
Confidence 999864321100 0112347889999999988889999999999987 6777778653
No 142
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.91 E-value=4.6e-26 Score=271.98 Aligned_cols=191 Identities=18% Similarity=0.204 Sum_probs=156.0
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCcccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~ 246 (1566)
+.||+|+||.||+++++ .++..+|+|++.+...... ...++. +|+++++.++||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~a~K~~~~~~~~~~~~~~~~~--------~e~~~l~~~~hp~i~~~~~~~~~ 66 (325)
T cd05594 1 KLLGKGTFGKVILVKEK------ATGRYYAMKILKKEVIVAKDEVAHTL--------TENRVLQNSRHPFLTALKYSFQT 66 (325)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCCCCceEEEEEc
Confidence 46999999999998863 5788999999986533222 222233 58899999999999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
.+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||+ +||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~lv~E~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~--~~kL~Dfg~ 142 (325)
T cd05594 67 HDRLCFVMEYANGGELFFHLSR--ERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDG--HIKITDFGL 142 (325)
T ss_pred CCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCC--CEEEecCCC
Confidence 9999999999997 99888863 4457899999999999999999997 8999999999999999998 799999999
Q ss_pred CCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
++...... .. .....||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.
T Consensus 143 ~~~~~~~~-----~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~tG~~ 194 (325)
T cd05594 143 CKEGIKDG-----AT------MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVV-------MYEMMCGRL 194 (325)
T ss_pred CeecCCCC-----cc------cccccCCcccCCHHHHccCCCCCccccccccce-------eeeeccCCC
Confidence 87533110 00 112348999999999998899999999999988 556666764
No 143
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.91 E-value=5.9e-26 Score=265.73 Aligned_cols=198 Identities=19% Similarity=0.233 Sum_probs=156.5
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCC---cccCCCccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG---CLRHPNVAP 239 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~---~l~HpNIV~ 239 (1566)
+|++++.||+|+||+||+|++. ...+..+|+|.+............+. +|+.+++ .++||||++
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~-----~~~~~~vavK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~hpniv~ 68 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDL-----KNGGRFVALKRVRVQTGEEGMPLSTI--------REVAVLRHLETFEHPNVVR 68 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEc-----CCCCeEEEEEEEecccCCCCchHHHH--------HHHHHHHhhcccCCCCcce
Confidence 6999999999999999998752 13467899999875433222222222 3555554 457999999
Q ss_pred cccccc-----ccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch
Q 000399 240 VLGLLK-----TSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1566)
Q Consensus 240 l~~~~~-----~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~ 314 (1566)
+++++. ....+++||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 69 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~- 147 (290)
T cd07862 69 LFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSG- 147 (290)
T ss_pred EEEEEecccCCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCC-
Confidence 999875 34579999999999999999755555578889999999999999999999999999999999999998
Q ss_pred hhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 315 ~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
.+||+|||+++..... .......||+.|+|||++.+..++..+|+|+.|++ .+..++|++
T Consensus 148 -~~kl~Dfg~~~~~~~~------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~~g~~ 207 (290)
T cd07862 148 -QIKLADFGLARIYSFQ------------MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI-------FAEMFRRKP 207 (290)
T ss_pred -CEEEccccceEeccCC------------cccccccccccccChHHHhCCCCCCccchHHHHHH-------HHHHHcCCC
Confidence 7999999999754311 01123358899999999988889999999999987 666667764
No 144
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.91 E-value=1.2e-24 Score=232.92 Aligned_cols=237 Identities=16% Similarity=0.257 Sum_probs=191.0
Q ss_pred cCCCCCCCCCcccccccCccCCCCceEeee---eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEeccccc
Q 000399 1289 PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINC 1365 (1566)
Q Consensus 1289 fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~---~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~ 1365 (1566)
..||++. ||.++. ..|++||+.++ .+.++.+|++.|++|.|..||..++|||. ||++||||+++-.|
T Consensus 48 iTpdk~~-----LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgse----Dgt~kIWdlR~~~~ 117 (311)
T KOG0315|consen 48 ITPDKKD-----LAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSE----DGTVKIWDLRSLSC 117 (311)
T ss_pred EcCCcch-----hhhccC-CeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCC----CceEEEEeccCccc
Confidence 5788876 888887 56999999875 78999999999999999999999999998 99999999999888
Q ss_pred ccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccc-----------c-ccccCCCCCccccccc
Q 000399 1366 VSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSM-----------D-SLHGGSPSSSISKINT 1431 (1566)
Q Consensus 1366 i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~-----------~-~~~~~~~~~~~~~~~~ 1431 (1566)
.+.|. |.++|++|..+|....|+|| +|.|++||+.+..+...+..... . ....+-..++.+.|..
T Consensus 118 qR~~~-~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l 196 (311)
T KOG0315|consen 118 QRNYQ-HNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRL 196 (311)
T ss_pred chhcc-CCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEc
Confidence 88886 77999999999999999888 79999999998766555432211 1 2222233345555542
Q ss_pred CC-------CCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCC-ceeeeeccCCcccCchhh
Q 000399 1432 DQ-------VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG-QKLHLWRGEPTELGFPSL 1503 (1566)
Q Consensus 1432 ~~-------~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg-~~l~~~~~h~~~v~~~~~ 1503 (1566)
.. .....+..|+..++.+.+||+ +++|+++|.|.+++||+..+. +.-.++++| ..+
T Consensus 197 ~~~~~~s~l~P~~k~~ah~~~il~C~lSPd----------~k~lat~ssdktv~iwn~~~~~kle~~l~gh------~rW 260 (311)
T KOG0315|consen 197 LNHQTASELEPVHKFQAHNGHILRCLLSPD----------VKYLATCSSDKTVKIWNTDDFFKLELVLTGH------QRW 260 (311)
T ss_pred cCCCccccceEhhheecccceEEEEEECCC----------CcEEEeecCCceEEEEecCCceeeEEEeecC------Cce
Confidence 21 223345678888999999887 999999999999999999987 555556665 445
Q ss_pred HHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeee
Q 000399 1504 VSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRII 1563 (1566)
Q Consensus 1504 V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafs 1563 (1566)
|... .||.||.+|+||++|+.+++||++.|+.++.++||-..-.|++.+
T Consensus 261 vWdc-----------~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~~vc~~ln 309 (311)
T KOG0315|consen 261 VWDC-----------AFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKAAVCVALN 309 (311)
T ss_pred EEee-----------eeccCccEEEecCCCCceeecccccCceeeecCCcccccEEEEee
Confidence 5544 455777899999999999999999999999999999998888865
No 145
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.91 E-value=4.8e-26 Score=272.44 Aligned_cols=195 Identities=19% Similarity=0.208 Sum_probs=158.9
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l~~~~~~ 246 (1566)
+.||+|+||.||+|+++ .++..||+|++.+.........+.+. +|..++..+ +||||+++++++.+
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~i~~~~~~~~~~~~~~~-------~e~~il~~~~~hp~Iv~~~~~~~~ 67 (329)
T cd05588 1 RVIGRGSYAKVLLVELK------KTRRIYAMKVIKKELVNDDEDIDWVQ-------TEKHVFETASNHPFLVGLHSCFQT 67 (329)
T ss_pred CeEeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhccCCCCCCceEEEEEc
Confidence 47999999999998863 56889999999875433322222222 588888888 69999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
.+.+|+||||+++ +|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~e~~~~g~L~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~--~~kL~Dfg~~ 143 (329)
T cd05588 68 ESRLFFVIEFVSGGDLMFHMQR--QRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEG--HIKLTDYGMC 143 (329)
T ss_pred CCEEEEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEECcCccc
Confidence 9999999999997 99888863 45689999999999999999999999999999999999999988 7999999999
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccccCC
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGD 397 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~d 397 (1566)
+...... . ......||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.+.+
T Consensus 144 ~~~~~~~-----~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~-------l~el~~g~~Pf~ 197 (329)
T cd05588 144 KEGIRPG-----D------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVL-------MFEMMAGRSPFD 197 (329)
T ss_pred cccccCC-----C------ccccccCCccccCHHHHcCCCCCCccceechHHH-------HHHHHHCCCCcc
Confidence 7432110 0 0112348899999999999899999999999988 677778876543
No 146
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.91 E-value=6.5e-26 Score=270.47 Aligned_cols=197 Identities=17% Similarity=0.138 Sum_probs=160.1
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcc-cCCCcccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l 240 (1566)
+|++.+.||+|+||.||+|+++ .++..+|+|++.+....... ...+. +|..++..+ +||+|+++
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~ 66 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERK------GTDELYAIKILKKDVVIQDDDVECTM--------VEKRVLALSGKPPFLTQL 66 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhccCCCeEeeE
Confidence 5889999999999999998863 46789999998865332221 11222 466777666 58999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.+.+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~E~~~~g~L~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--~~kL 142 (323)
T cd05616 67 HSCFQTMDRLYFVMEYVNGGDLMYQIQQ--VGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEG--HIKI 142 (323)
T ss_pred EEEEecCCEEEEEEcCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCC--cEEE
Confidence 9999999999999999986 99988873 34578889999999999999999999999999999999999998 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++...... . ......||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 143 ~DfG~~~~~~~~~-----~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi-------l~elltg~~P 200 (323)
T cd05616 143 ADFGMCKENMWDG-----V------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVL-------LYEMLAGQAP 200 (323)
T ss_pred ccCCCceecCCCC-----C------ccccCCCChhhcCHHHhcCCCCCCccchhchhHH-------HHHHHhCCCC
Confidence 9999997533100 0 0112358999999999999999999999999988 6777788765
No 147
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.91 E-value=3.4e-26 Score=276.46 Aligned_cols=215 Identities=15% Similarity=0.105 Sum_probs=168.8
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeee-cccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIE-GKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~-~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+-.+.++||+|+||+||+|+-+...+ .....||+|..+. ........+++++ |+++|++++|||||++|
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~--~~~~~VAvK~~k~~~~~~~~~~~e~m~--------EArvMr~l~H~NVVr~y 227 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNG--FKVVPVAVKTTKGSSELTKEQIKEFMK--------EARVMRQLNHPNVVRFY 227 (474)
T ss_pred CccccceeecccccEEEEEEEEecCC--ceeeeeEEEeecccccccHHHHHHHHH--------HHHHHHhCCCCCEEEEE
Confidence 45567999999999999988643111 0112289999875 2345566677775 99999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
|+...+..+|||||+|.| +|.++|+..+. .++..+...++++++.||+|||++++|||||..+|+|++.++ .+||+
T Consensus 228 GVa~~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~--~vKIS 304 (474)
T KOG0194|consen 228 GVAVLEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKG--VVKIS 304 (474)
T ss_pred EEEcCCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCC--eEEeC
Confidence 999999999999999997 99999995433 478888899999999999999999999999999999999988 58999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc--ccccCCc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA--GRRWGDY 398 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a--grs~~dl 398 (1566)
|||+++........ ...+.-...|+|||.+....|+.++|+|+.|++ ..+.++ ..+|...
T Consensus 305 DFGLs~~~~~~~~~-----------~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~-------~~Eif~~g~~Py~g~ 366 (474)
T KOG0194|consen 305 DFGLSRAGSQYVMK-----------KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVL-------LWEIFENGAEPYPGM 366 (474)
T ss_pred ccccccCCcceeec-----------cccccCcceecChhhhccCccccccchhheeee-------EEeeeccCCCCCCCC
Confidence 99999864311000 011224456999999999999999999999987 444443 2355666
Q ss_pred cceeecceeE
Q 000399 399 TFHMVMPWVI 408 (1566)
Q Consensus 399 ~q~pv~pwv~ 408 (1566)
..+.+..||+
T Consensus 367 ~~~~v~~kI~ 376 (474)
T KOG0194|consen 367 KNYEVKAKIV 376 (474)
T ss_pred CHHHHHHHHH
Confidence 6666777774
No 148
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.91 E-value=7.3e-26 Score=270.88 Aligned_cols=202 Identities=16% Similarity=0.120 Sum_probs=160.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcc-cCCCcccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l 240 (1566)
+|++++.||+|+||.||++++. ....++..+|+|++.+...... ...+.. .+|+.+|+.+ +||||+++
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~---~~~~~~~~~aiK~~~~~~~~~~~~~~~~~-------~~e~~~l~~l~~~~~i~~~ 70 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKV---TGHDTGKLYAMKVLQKAALVQKAKTVEHT-------RTERNVLEHVRQSPFLVTL 70 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEc---ccCCCCCEEEEEEEEHHHHhhhhhHHHHH-------HHHHHHHHhccCCCCcccE
Confidence 4889999999999999987752 2235688999999876432211 111111 1588899999 59999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++..++.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 71 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~--~~kl 146 (332)
T cd05614 71 HYAFQTEAKLHLILDYVSGGEMFTHLYQ--RDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEG--HVVL 146 (332)
T ss_pred EEEEecCCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCC--CEEE
Confidence 9999999999999999997 99999873 44578899999999999999999999999999999999999998 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++........ . .....||+.|+|||++.+. .++..+|+|+.|++ .+..++|+.+
T Consensus 147 ~DfG~~~~~~~~~~~------~----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~i-------l~elltg~~p 206 (332)
T cd05614 147 TDFGLSKEFLSEEKE------R----TYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGIL-------IFELLTGASP 206 (332)
T ss_pred eeCcCCccccccCCC------c----cccccCCccccCHHHhcCCCCCCCccccccchhh-------hhhhhcCCCC
Confidence 999999854321100 0 1123489999999998765 47788999999988 6677778764
No 149
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.91 E-value=9.6e-26 Score=273.14 Aligned_cols=198 Identities=18% Similarity=0.137 Sum_probs=163.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
.+...+.||+|+||.||+++++ ++|..||||..++.. .......+. +|+++|++++|||||++++
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnk------etG~~vAvK~~~~~~-~~r~~e~~~--------~EieilkKLnh~NIVk~f~ 78 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNK------ETGRLVAVKTFNKES-SLRPRERWC--------REIEILKKLNHPNIVKLFD 78 (732)
T ss_pred ceeehhhhcCCccceeeeeccc------ccccchhHHhhhhhc-ccchHHHHH--------HHHHHHHHcCchhhhhhcc
Confidence 4667789999999999999974 799999999988753 333333344 6999999999999999999
Q ss_pred cccccC------ceeeeccCCcc-chhhhhccCcc-cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc-
Q 000399 243 LLKTSG------LITSVIPKTPY-TLENILQFSPN-ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC- 313 (1566)
Q Consensus 243 ~~~~~~------~l~LV~E~~~g-sL~~~l~~~~~-~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~- 313 (1566)
+-++.. .-.+|||||.| +|+.+|+...+ ..+++.+++.++..++.||.|||++||+||||||.||++-.+.
T Consensus 79 iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Ged 158 (732)
T KOG4250|consen 79 IEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGED 158 (732)
T ss_pred cCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCC
Confidence 876644 56789999997 99999985332 3589999999999999999999999999999999999986543
Q ss_pred -hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-ccchhhccccccccccCCchhhhHHHhhc
Q 000399 314 -WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1566)
Q Consensus 314 -~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~y~~~~d~Ws~G~isnfeyL~~ln~~a 391 (1566)
...-||+|||.||...... ...+.+||+.|.+||+.. ...|+..+|.|+.|++ .+...+
T Consensus 159 gq~IyKLtDfG~Arel~d~s------------~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~Gvt-------lY~caT 219 (732)
T KOG4250|consen 159 GQSIYKLTDFGAARELDDNS------------LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVT-------LYECAT 219 (732)
T ss_pred CceEEeeecccccccCCCCC------------eeeeecCchhhcChHHHhhccCcCceeehhhhhhH-------HHHHhc
Confidence 3467999999999765311 234567999999999998 4889999999999987 777777
Q ss_pred ccc
Q 000399 392 GRR 394 (1566)
Q Consensus 392 grs 394 (1566)
|..
T Consensus 220 G~l 222 (732)
T KOG4250|consen 220 GEL 222 (732)
T ss_pred cCC
Confidence 754
No 150
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.91 E-value=2.1e-25 Score=273.35 Aligned_cols=195 Identities=16% Similarity=0.085 Sum_probs=160.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++++.||+|+||.||+|... ....+..+|+|.+..... .. +|+.+|+.++|||||++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~----~~~~~~~v~vK~~~~~~~-------~~--------~E~~il~~l~h~~iv~~ 151 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKH----GDEQRKKVIVKAVTGGKT-------PG--------REIDILKTISHRAIINL 151 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEc----CCccceeEEEEecccccc-------HH--------HHHHHHHhcCCCCccce
Confidence 347999999999999999987631 124567789998764311 11 59999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++++.....+|+|||++.++|.+++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 152 ~~~~~~~~~~~lv~e~~~~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~--~~~l~ 227 (392)
T PHA03207 152 IHAYRWKSTVCMVMPKYKCDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPE--NAVLG 227 (392)
T ss_pred eeeEeeCCEEEEEehhcCCCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC--CEEEc
Confidence 99999999999999999999999885 345688999999999999999999999999999999999999998 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|||+++....... .. ......||+.|+|||++.+..|+..+|+|+.|++ .+..+.|+.
T Consensus 228 DfG~a~~~~~~~~-----~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvi-------l~el~~g~~ 285 (392)
T PHA03207 228 DFGAACKLDAHPD-----TP----QCYGWSGTLETNSPELLALDPYCAKTDIWSAGLV-------LFEMSVKNV 285 (392)
T ss_pred cCccccccCcccc-----cc----cccccccccCccCHhHhcCCCCCchhhHHHHHHH-------HHHHHHCCC
Confidence 9999975442111 00 1123458999999999998889999999999988 677777764
No 151
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.91 E-value=3.8e-26 Score=272.74 Aligned_cols=193 Identities=19% Similarity=0.206 Sum_probs=154.5
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcccCCCcccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~ 246 (1566)
+.||+|+||+||+|+++ .++..+|+|++.+..... ....+++. .+..+++.++||||+++++++.+
T Consensus 1 ~~lg~G~fg~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~~-------e~~~~l~~~~h~~Iv~~~~~~~~ 67 (325)
T cd05602 1 KVIGKGSFGKVLLARHK------AEEKFYAVKVLQKKAILKKKEEKHIMS-------ERNVLLKNVKHPFLVGLHFSFQT 67 (325)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHHHhhhHHHHHHH-------HHHHHHHhCCCCCCCceeEEEEc
Confidence 47999999999998863 467889999987643222 12222332 12334678899999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
.+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~--~~kl~DfG~a 143 (325)
T cd05602 68 ADKLYFVLDYINGGELFYHLQR--ERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQG--HIVLTDFGLC 143 (325)
T ss_pred CCeEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCC--CEEEccCCCC
Confidence 9999999999997 99999873 44578889999999999999999999999999999999999988 7999999999
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+...... .. .....||+.|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 144 ~~~~~~~-----~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~~g~~p 195 (325)
T cd05602 144 KENIEHN-----GT------TSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAV-------LYEMLYGLPP 195 (325)
T ss_pred cccccCC-----CC------cccccCCccccCHHHHcCCCCCCccccccccHH-------HHHHhcCCCC
Confidence 8533110 00 112348999999999999899999999999988 6667777654
No 152
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.91 E-value=2.9e-25 Score=256.21 Aligned_cols=234 Identities=14% Similarity=0.173 Sum_probs=190.9
Q ss_pred hccccCCCceec--cCC-CCCCCCCcccccccCccCCCCceEee--eeehhhhhccCcceeeeecCcceEEEeeccCCCc
Q 000399 1277 SNLMKCEPWFWF--PTP-AASWDGPDFLGRVGGLKDESPWKIKA--SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1351 (1566)
Q Consensus 1277 ~~~~~H~~~V~~--fSp-dg~~~~~~~LaSgS~D~~I~vWdl~~--~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~ 1351 (1566)
.+...|+.-|.+ |.| .|.+ |++||.|+.|+||++-. ++++++.||..+|++++|+.+|..|.|+|-
T Consensus 208 ~~~~gH~kgvsai~~fp~~~hL-----lLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sf---- 278 (503)
T KOG0282|consen 208 HNLSGHTKGVSAIQWFPKKGHL-----LLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASF---- 278 (503)
T ss_pred eeccCCccccchhhhccceeeE-----EEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeec----
Confidence 456678888887 566 7888 99999999999999875 499999999999999999999999999986
Q ss_pred ccceeeEEecccccccccccccccccceEEeecCC-ceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccc
Q 000399 1352 KGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSG-RIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK 1428 (1566)
Q Consensus 1352 D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~-~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~ 1428 (1566)
|++|++||++||+|+..+. -...++|+.|+|++. .+++| |+.|+.||+++|+.++.+..|
T Consensus 279 D~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~h---------------- 341 (503)
T KOG0282|consen 279 DRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRH---------------- 341 (503)
T ss_pred ceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhh----------------
Confidence 9999999999999998884 245679999999994 44455 999999999999988766543
Q ss_pred cccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhh
Q 000399 1429 INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAIC 1508 (1566)
Q Consensus 1429 ~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~ 1508 (1566)
-+.|+.+.|-++ |+.+++.+.|+++|+|+.+.+..+.....+. .....++.
T Consensus 342 --------------Lg~i~~i~F~~~----------g~rFissSDdks~riWe~~~~v~ik~i~~~~-----~hsmP~~~ 392 (503)
T KOG0282|consen 342 --------------LGAILDITFVDE----------GRRFISSSDDKSVRIWENRIPVPIKNIADPE-----MHTMPCLT 392 (503)
T ss_pred --------------hhheeeeEEccC----------CceEeeeccCccEEEEEcCCCccchhhcchh-----hccCccee
Confidence 456778888776 9999999999999999999876543332211 01112233
Q ss_pred ccCCCc------------------------------------ccCCCcccchhHHHhccCCCceeEEeeccCceeEEeec
Q 000399 1509 ACGSEK------------------------------------MQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1552 (1566)
Q Consensus 1509 ~s~~~~------------------------------------~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~g 1552 (1566)
.+|.+. ...++|||||++|++|+.||.+.+||.++-+.+..+++
T Consensus 393 ~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lka 472 (503)
T KOG0282|consen 393 LHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKA 472 (503)
T ss_pred cCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEeechhhhhhhcccc
Confidence 333221 12245999999999999999999999999999999999
Q ss_pred cCceeeEeeeecc
Q 000399 1553 HDGYVTKVRIISK 1565 (1566)
Q Consensus 1553 H~~~V~~Vafspd 1565 (1566)
|++++..+.|+|.
T Consensus 473 h~~~ci~v~wHP~ 485 (503)
T KOG0282|consen 473 HDQPCIGVDWHPV 485 (503)
T ss_pred CCcceEEEEecCC
Confidence 9999999999984
No 153
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.91 E-value=1e-25 Score=269.74 Aligned_cols=193 Identities=20% Similarity=0.200 Sum_probs=156.7
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l~~~~~~ 246 (1566)
+.||+|+||.||+|+++ .++..+|+|++.+.........+.+. +|+.++..+ +||||+++++++.+
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~E~~~l~~~~~hp~iv~~~~~~~~ 67 (329)
T cd05618 1 RVIGRGSYAKVLLVRLK------KTERIYAMKVVKKELVNDDEDIDWVQ-------TEKHVFEQASNHPFLVGLHSCFQT 67 (329)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEhhHhcchhHHHHHH-------HHHHHHHhcCCCCcCCceeeEEEe
Confidence 47999999999998863 56889999999875333222222222 577777666 79999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
.+.+|+||||+++ +|..++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~E~~~~~~L~~~~~~--~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~--~~kL~DfG~~ 143 (329)
T cd05618 68 ESRLFFVIEYVNGGDLMFHMQR--QRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEG--HIKLTDYGMC 143 (329)
T ss_pred CCEEEEEEeCCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC--CEEEeeCCcc
Confidence 9999999999997 99888863 34578999999999999999999999999999999999999998 7999999999
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+....... ......||+.|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 144 ~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~~g~~P 195 (329)
T cd05618 144 KEGLRPGD-----------TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVL-------MFEMMAGRSP 195 (329)
T ss_pred ccccCCCC-----------ccccccCCccccCHHHHcCCCCCCccceecccHH-------HHHHhhCCCC
Confidence 75331100 0112348999999999999999999999999988 6777788764
No 154
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.91 E-value=9.5e-26 Score=263.44 Aligned_cols=217 Identities=15% Similarity=0.143 Sum_probs=176.8
Q ss_pred ccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccc
Q 000399 165 FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 244 (1566)
Q Consensus 165 ~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~ 244 (1566)
.-++-||.|+-|.||+|+- .+..||||+++.-+. .+|.-|++|+||||+.+.|+|
T Consensus 127 sELeWlGSGaQGAVF~Grl--------~netVAVKKV~elkE-----------------TdIKHLRkLkH~NII~FkGVC 181 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRL--------HNETVAVKKVRELKE-----------------TDIKHLRKLKHPNIITFKGVC 181 (904)
T ss_pred hhhhhhccCcccceeeeec--------cCceehhHHHhhhhh-----------------hhHHHHHhccCcceeeEeeee
Confidence 3467799999999999884 578899999764221 377789999999999999999
Q ss_pred cccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcC
Q 000399 245 KTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1566)
Q Consensus 245 ~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFG 323 (1566)
.....+|||||||.. -|.++|+ .+..++......|..+|+.||.|||.+.|||||||.-||||+.+. .|||+|||
T Consensus 182 tqsPcyCIiMEfCa~GqL~~VLk--a~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d--~VKIsDFG 257 (904)
T KOG4721|consen 182 TQSPCYCIIMEFCAQGQLYEVLK--AGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDD--VVKISDFG 257 (904)
T ss_pred cCCceeEEeeeccccccHHHHHh--ccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccc--eEEecccc
Confidence 999999999999995 9999998 345577777888999999999999999999999999999999998 79999999
Q ss_pred CCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc-cCCcccee
Q 000399 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR-WGDYTFHM 402 (1566)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs-~~dl~q~p 402 (1566)
.++..... .+ ...+.||..|||||++...+-.+++|+|+.|++ +.++++|.. |.|..+..
T Consensus 258 TS~e~~~~------ST------kMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVV-------LWEmLT~EiPYkdVdssA 318 (904)
T KOG4721|consen 258 TSKELSDK------ST------KMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVV-------LWEMLTGEIPYKDVDSSA 318 (904)
T ss_pred chHhhhhh------hh------hhhhhhhHhhhCHHHhhcCCcccccceehhHHH-------HHHHHhcCCCccccchhe
Confidence 99865521 11 234569999999999999999999999999998 777888865 57776665
Q ss_pred ecceeE-eeccC--CCCCCCccccccccccc
Q 000399 403 VMPWVI-DFSTK--PDENFDSGSRDLSKSKW 430 (1566)
Q Consensus 403 v~pwv~-d~~~~--~~~~~~~~~rdLskp~~ 430 (1566)
|+ |-+ ...-. ....+|..|+-|.|--|
T Consensus 319 II-wGVGsNsL~LpvPstcP~GfklL~Kqcw 348 (904)
T KOG4721|consen 319 II-WGVGSNSLHLPVPSTCPDGFKLLLKQCW 348 (904)
T ss_pred eE-EeccCCcccccCcccCchHHHHHHHHHH
Confidence 55 544 22222 24567888888776544
No 155
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.91 E-value=1.1e-25 Score=267.79 Aligned_cols=192 Identities=17% Similarity=0.163 Sum_probs=154.0
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCc-ccCCCccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGC-LRHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~-l~HpNIV~l~~~~~ 245 (1566)
+.||+|+||.||+|++. .++..||+|++.+...... .....+ +|..++.. .+||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~hp~i~~~~~~~~ 66 (316)
T cd05592 1 KVLGKGSFGKVMLAELK------GTNEFFAIKALKKDVVLEDDDVECTM--------VERRVLALAWEHPFLTHLFCTFQ 66 (316)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhhHHHHH--------HHHHHHHhccCCCCccceeeEEE
Confidence 47999999999998863 5678899999986532221 122222 35555554 47999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
..+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~gg~L~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~--~~kL~Dfg~ 142 (316)
T cd05592 67 TKEHLFFVMEYLNGGDLMFHIQS--SGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDG--HIKIADFGM 142 (316)
T ss_pred cCCEEEEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCC--CEEEccCcC
Confidence 99999999999986 99998873 34578999999999999999999999999999999999999988 799999999
Q ss_pred CCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
++....... ......||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 143 a~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~i-------l~ell~G~~P 195 (316)
T cd05592 143 CKENMNGEG-----------KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVL-------LYEMLIGQSP 195 (316)
T ss_pred CeECCCCCC-----------ccccccCCccccCHHHHcCCCCCCcccchhHHHH-------HHHHHhCCCC
Confidence 985432100 1112348999999999998889999999999988 6677778754
No 156
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.91 E-value=8.7e-26 Score=270.48 Aligned_cols=201 Identities=14% Similarity=0.086 Sum_probs=161.0
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||+++++ .++..+|+|++.+.........+.+. +|+.++..++||||++++
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~l~~~~~~~i~~~~ 67 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLK------NADKVFAMKILNKWEMLKRAETACFR-------EERDVLVNGDNQWITTLH 67 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEEC------CCCCEEEEEEEeHHHHHHhhHHHHHH-------HHHHHHhhCCCCCEeeEE
Confidence 36999999999999999988753 46788999998764332222222222 588889999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+.+.+|+||||+++ +|.+++... ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~--~~kL~ 144 (332)
T cd05623 68 YAFQDENNLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNG--HIRLA 144 (332)
T ss_pred EEEecCCEEEEEEeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCC--CEEEe
Confidence 999999999999999986 999999742 34578888999999999999999999999999999999999888 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-----ccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-----SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-----~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... . ......||+.|+|||++. ...++..+|+|+.|++ .+..+.|+.+
T Consensus 145 DfG~a~~~~~~~~------~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvi-------l~ell~g~~P 207 (332)
T cd05623 145 DFGSCLKLMEDGT------V----QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVC-------MYEMLYGETP 207 (332)
T ss_pred ecchheecccCCc------c----eecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHH-------HHHHhcCCCC
Confidence 9999875331100 0 112235899999999986 3457789999999987 6777778764
No 157
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.90 E-value=1.2e-25 Score=267.75 Aligned_cols=192 Identities=20% Similarity=0.209 Sum_probs=154.8
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCC-CCCCcccCCCccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDES-SVPGCLRHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi-~iL~~l~HpNIV~l~~~~~ 245 (1566)
+.||+|+||.||+|++. .++..+|+|++.+..... ....+++ +|. .+++.++||||+++++++.
T Consensus 1 ~~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~~l~~~~h~~iv~~~~~~~ 66 (321)
T cd05603 1 KVIGKGSFGKVLLAKRK------SDGSFYAVKVLQKKTILKKKEQNHIM--------AERNVLLKNLKHPFLVGLHYSFQ 66 (321)
T ss_pred CeeeeCCCEEEEEEEEC------CCCCEEEEEEEEHHHHHHhhHHHHHH--------HHHHHHHHhCCCCCccceeeEEE
Confidence 47999999999999863 568899999987653322 1222233 244 3578889999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
+.+..|+||||+++ +|...+. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~--~~kl~Dfg~ 142 (321)
T cd05603 67 TAEKLYFVLDYVNGGELFFHLQ--RERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQG--HVVLTDFGL 142 (321)
T ss_pred cCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEccCCC
Confidence 99999999999997 9988886 345578899999999999999999999999999999999999998 799999999
Q ss_pred CCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
++...... . ......||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 143 ~~~~~~~~-----~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~~g~~p 195 (321)
T cd05603 143 CKEGVEPE-----E------TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAV-------LYEMLYGLPP 195 (321)
T ss_pred CccCCCCC-----C------ccccccCCcccCCHHHhcCCCCCCcCcccccchh-------hhhhhcCCCC
Confidence 87532110 0 0112348899999999998889999999999988 6667777653
No 158
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.90 E-value=2.3e-24 Score=243.50 Aligned_cols=254 Identities=15% Similarity=0.223 Sum_probs=194.0
Q ss_pred ccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee----eehhhhhccCcceeeeecCcceEEEeeccCCCc
Q 000399 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS----ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGF 1351 (1566)
Q Consensus 1278 ~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~----~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~ 1351 (1566)
....|++.||+ ||++|++ |||+|.|.++.+|++... ..+++.||..+|..+.||||++++++++.
T Consensus 219 il~~htdEVWfl~FS~nGky-----LAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~---- 289 (519)
T KOG0293|consen 219 ILQDHTDEVWFLQFSHNGKY-----LASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGF---- 289 (519)
T ss_pred hHhhCCCcEEEEEEcCCCee-----EeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCc----
Confidence 45569999998 9999999 999999999999997642 57889999999999999999999999997
Q ss_pred ccceeeEEecccccccccc-cccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccc--cCCCC---
Q 000399 1352 KGTVQKWELTRINCVSGYY-GHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLH--GGSPS--- 1423 (1566)
Q Consensus 1352 D~tVrlWDl~tg~~i~tl~-gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~--~~~~~--- 1423 (1566)
|..+++||+.+|.+...|. +|...+.+++|.|+|..+++| |++|..||+. |..+...++.....+. ....+
T Consensus 290 ~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~Dgk~ 368 (519)
T KOG0293|consen 290 DEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYDGKY 368 (519)
T ss_pred hHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCC-cchhhcccccccceeEEEEEcCCCcE
Confidence 8899999999999988884 567899999999999999887 9999999986 3222222221111000 00111
Q ss_pred -------CcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCc
Q 000399 1424 -------SSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT 1496 (1566)
Q Consensus 1424 -------~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~ 1496 (1566)
..+.+++.+...-........+|.+...+.+ |+++++.=.+..|++||+...+.++.+.||..
T Consensus 369 vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d----------~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq 438 (519)
T KOG0293|consen 369 VLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKD----------GKLALVNLQDQEIHLWDLEENKLVRKYFGHKQ 438 (519)
T ss_pred EEEEecccceeeechhhhhhhccccccCceeEEEEcCC----------CcEEEEEcccCeeEEeecchhhHHHHhhcccc
Confidence 1111111111111112233455666666654 99999999999999999999999999999853
Q ss_pred ccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeecc
Q 000399 1497 ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1497 ~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafspd 1565 (1566)
...+-.-||.+. +.++|||||+|+.|+||+..+|+++.++.||...|++|+|+|.
T Consensus 439 ----~~fiIrSCFgg~----------~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~ 493 (519)
T KOG0293|consen 439 ----GHFIIRSCFGGG----------NDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPA 493 (519)
T ss_pred ----cceEEEeccCCC----------CcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCC
Confidence 234444455433 3368999999999999999999999999999999999999994
No 159
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.90 E-value=1.1e-25 Score=267.89 Aligned_cols=196 Identities=18% Similarity=0.175 Sum_probs=158.6
Q ss_pred ceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccc
Q 000399 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1566)
Q Consensus 167 ~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~ 246 (1566)
++.||+|+||.||++++.. ...++..+|+|++.+..........+. +|+++|++++||||+++++++.+
T Consensus 1 l~~lg~G~~g~Vy~~~~~~---~~~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~~~~~~~~ 69 (318)
T cd05582 1 LKVLGQGSFGKVFLVRKIT---GPDAGQLYAMKVLKKATLKVRDRVRTK--------MERDILAEVNHPFIVKLHYAFQT 69 (318)
T ss_pred CceeeeCCCEEEEEEEEec---cCCCCCEEEEEEEEHHHhhhhhHHHHH--------HHHHHHHhCCCCCcccEEEEEEc
Confidence 3689999999999876421 124688999999986543322222232 58999999999999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
++.+|+||||+++ +|.+++. +...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 70 ~~~~~lv~e~~~~~~L~~~l~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~kL~Dfg~~ 145 (318)
T cd05582 70 EGKLYLILDFLRGGDLFTRLS--KEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG--HIKLTDFGLS 145 (318)
T ss_pred CCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCC--cEEEeeccCC
Confidence 9999999999986 9999986 344578999999999999999999999999999999999999998 7999999998
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+...... . ......|++.|+|||++.+..++...|+|+.|++ .+..++|+.+
T Consensus 146 ~~~~~~~------~-----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~tg~~p 197 (318)
T cd05582 146 KESIDHE------K-----KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVL-------MFEMLTGSLP 197 (318)
T ss_pred cccCCCC------C-----ceecccCChhhcCHHHHcCCCCCCccceeccceE-------eeeeccCCCC
Confidence 8543210 0 0112358899999999998888899999999988 5666677654
No 160
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.90 E-value=1e-25 Score=268.48 Aligned_cols=192 Identities=15% Similarity=0.163 Sum_probs=155.4
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcc-cCCCccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l~~~~~ 245 (1566)
+.||+|+||.||+|+++ .++..+|+|++.+...... ....+. .|..++..+ +||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~il~~~~~hp~i~~~~~~~~ 66 (321)
T cd05591 1 KVLGKGSFGKVMLAELK------GTDEVYAIKVLKKDVILQDDDVDCTM--------TEKRILALAAKHPFLTALHCCFQ 66 (321)
T ss_pred CccccCCCeEEEEEEEC------CCCCEEEEEEEeHHHhhhhhHHHHHH--------HHHHHHHhccCCCCccceeeEEE
Confidence 46999999999998863 4678999999886533222 122222 477777755 7999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
+.+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~E~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~--~~kL~Dfg~ 142 (321)
T cd05591 67 TKDRLFFVMEYVNGGDLMFQIQR--SRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEG--HCKLADFGM 142 (321)
T ss_pred cCCeEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEEeeccc
Confidence 99999999999997 99988873 44578889999999999999999999999999999999999998 799999999
Q ss_pred CCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
++...... .. .....||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 143 ~~~~~~~~-----~~------~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~i-------l~el~tg~~P 195 (321)
T cd05591 143 CKEGILNG-----VT------TTTFCGTPDYIAPEILQELEYGPSVDWWALGVL-------MYEMMAGQPP 195 (321)
T ss_pred ceecccCC-----cc------ccccccCccccCHHHHcCCCCCCccceechhHH-------HHHHhcCCCC
Confidence 87533110 00 112348899999999998899999999999988 6777778764
No 161
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.90 E-value=1.3e-25 Score=267.89 Aligned_cols=197 Identities=15% Similarity=0.130 Sum_probs=159.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCccc-CCCcccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 240 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~l 240 (1566)
+|+..+.||+|+||.||+|+++ .++..||+|++.+...... ....+. +|..+++.+. ||+|+++
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~i~~~ 66 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERK------GTDELYAIKILKKDVVIQDDDVECTM--------VEKRVLALQDKPPFLTQL 66 (323)
T ss_pred CceEEEEEEecCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhccCCCchhhe
Confidence 4788899999999999998863 5788999999886533222 122233 4777887775 5788899
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.+.+.+|+||||+++ +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~Ey~~~g~L~~~i~--~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~--~ikL 142 (323)
T cd05615 67 HSCFQTVDRLYFVMEYVNGGDLMYHIQ--QVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEG--HIKI 142 (323)
T ss_pred eeEEecCCEEEEEEcCCCCCcHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEEE
Confidence 9999999999999999986 9999987 345588999999999999999999999999999999999999998 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++...... . ......||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 143 ~Dfg~~~~~~~~~-----~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvi-------l~elltG~~p 200 (323)
T cd05615 143 ADFGMCKEHMVDG-----V------TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVL-------LYEMLAGQPP 200 (323)
T ss_pred eccccccccCCCC-----c------cccCccCCccccCHHHHcCCCCCCccchhhhHHH-------HHHHHhCCCC
Confidence 9999998533110 0 0112348899999999998889999999999987 6677778764
No 162
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.90 E-value=1.5e-25 Score=267.26 Aligned_cols=191 Identities=20% Similarity=0.209 Sum_probs=154.4
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCC-CCCcccCCCccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESS-VPGCLRHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~-iL~~l~HpNIV~l~~~~~ 245 (1566)
+.||+|+||+||+|+++ .++..||+|++.+..... ....+++ +|.. +++.++||||+++++.+.
T Consensus 1 ~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~--------~e~~~~~~~l~hp~iv~~~~~~~ 66 (323)
T cd05575 1 KVIGKGSFGKVLLAKHK------ADGKFYAVKVLQKKAILKKKEQKHIM--------AERNVLLKNVKHPFLVGLHYSFQ 66 (323)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHHhhhhHHHHHH--------HHHHHHHhhCCCCCCCCeeEEEE
Confidence 47999999999998863 578999999987643322 1222233 2433 467889999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
..+.+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~--~~kl~Dfg~ 142 (323)
T cd05575 67 TADKLYFVLDYVNGGELFFHLQR--ERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQG--HVVLTDFGL 142 (323)
T ss_pred eCCEEEEEEcCCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCC--cEEEeccCC
Confidence 99999999999997 99998873 44678889999999999999999999999999999999999998 799999999
Q ss_pred CCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
++....... ......||+.|+|||++.+..++..+|+|+.|++ .+..+.|+.
T Consensus 143 ~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~i-------l~ell~g~~ 194 (323)
T cd05575 143 CKEGIEHSK-----------TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAV-------LYEMLYGLP 194 (323)
T ss_pred CcccccCCC-----------ccccccCChhhcChhhhcCCCCCccccccccchh-------hhhhhcCCC
Confidence 975331100 0112348999999999999899999999999988 666667764
No 163
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.90 E-value=1.4e-25 Score=267.95 Aligned_cols=191 Identities=19% Similarity=0.203 Sum_probs=154.2
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCC-CCCcccCCCccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESS-VPGCLRHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~-iL~~l~HpNIV~l~~~~~ 245 (1566)
+.||+|+||+||+|+++ .++..+|+|++.+..... ....+++ +|.. +++.++||||+++++++.
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~~l~~~~hp~iv~~~~~~~ 66 (325)
T cd05604 1 KVIGKGSFGKVLLAKRK------LDGKCYAVKVLQKKIVLNRKEQKHIM--------AERNVLLKNVKHPFLVGLHYSFQ 66 (325)
T ss_pred CceeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHHhCCCCCCccEEEEEe
Confidence 46999999999998863 578899999987643222 2222333 2443 467789999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
..+.+|+||||+++ +|..++. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~--~~kL~DfG~ 142 (325)
T cd05604 67 TTEKLYFVLDFVNGGELFFHLQ--RERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQG--HVVLTDFGL 142 (325)
T ss_pred cCCEEEEEEcCCCCCCHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEEeecCC
Confidence 99999999999997 9988886 345688999999999999999999999999999999999999998 799999999
Q ss_pred CCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
++....... ......||+.|+|||++.+..++..+|+|+.|++ .+.++.|+.
T Consensus 143 ~~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~i-------l~el~~G~~ 194 (325)
T cd05604 143 CKEGIAQSD-----------TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAV-------LYEMLYGLP 194 (325)
T ss_pred cccCCCCCC-----------CcccccCChhhCCHHHHcCCCCCCcCccccccce-------ehhhhcCCC
Confidence 875321100 0112348999999999999899999999999988 566667765
No 164
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.90 E-value=1.9e-25 Score=270.36 Aligned_cols=196 Identities=19% Similarity=0.255 Sum_probs=160.6
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..++|++.+.||+|+||.||+|.+. .++..+|+|++...........+++ +|+.+++.++||||++
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~ 84 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDT------VLGINVAVKKLSRPFQNQTHAKRAY--------RELVLLKCVNHKNIIS 84 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEc------CCCceeEEEEecccccchhHHHHHH--------HHHHHHHhCCCCCEee
Confidence 4678999999999999999998863 5688999999875433333333333 5999999999999999
Q ss_pred ccccccccC------ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc
Q 000399 240 VLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 240 l~~~~~~~~------~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~ 313 (1566)
+++++...+ .+|+||||++++|.+.+.. .+++..+..++.||+.||.|||++||+||||||+|||++.++
T Consensus 85 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~ 160 (359)
T cd07876 85 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 160 (359)
T ss_pred eeeeeccCCCccccceeEEEEeCCCcCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC
Confidence 999986543 5799999999988887752 367788899999999999999999999999999999999998
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
.+||+|||+++...... ......||+.|+|||++.+..++..+|+|+.|++ .+.++.|+
T Consensus 161 --~~kl~Dfg~a~~~~~~~------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~i-------l~el~tg~ 219 (359)
T cd07876 161 --TLKILDFGLARTACTNF------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI-------MGELVKGS 219 (359)
T ss_pred --CEEEecCCCccccccCc------------cCCCCcccCCCCCchhccCCCCCcchhhHHHHHH-------HHHHHhCC
Confidence 79999999998533110 0112347889999999999899999999999987 67777776
Q ss_pred c
Q 000399 394 R 394 (1566)
Q Consensus 394 s 394 (1566)
.
T Consensus 220 ~ 220 (359)
T cd07876 220 V 220 (359)
T ss_pred C
Confidence 4
No 165
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.90 E-value=3.7e-24 Score=266.41 Aligned_cols=244 Identities=18% Similarity=0.275 Sum_probs=203.2
Q ss_pred cCCCCCCCCCcccccccCccCCCCceEeee---eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEe-cccc
Q 000399 1289 PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWEL-TRIN 1364 (1566)
Q Consensus 1289 fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~---~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl-~tg~ 1364 (1566)
||++|.+ +++++.|+.+++|+..+. .++.+.+|...|++++|+||+.++++|+. |++|+|||+ ..+.
T Consensus 167 fs~~g~~-----l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~----D~tiriwd~~~~~~ 237 (456)
T KOG0266|consen 167 FSPDGRA-----LAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSD----DKTLRIWDLKDDGR 237 (456)
T ss_pred EcCCCCe-----EEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecC----CceEEEeeccCCCe
Confidence 8999998 999999999999999654 46777899999999999999999999998 999999999 5669
Q ss_pred cccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccc-----------cCCCCCccccccc
Q 000399 1365 CVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLH-----------GGSPSSSISKINT 1431 (1566)
Q Consensus 1365 ~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~-----------~~~~~~~~~~~~~ 1431 (1566)
++++++||...|++++|+|.++.++|| |++|+|||+++|+++..+.+|+..+.. +++.++.+.+|+.
T Consensus 238 ~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~ 317 (456)
T KOG0266|consen 238 NLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDL 317 (456)
T ss_pred EEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEEC
Confidence 999999999999999999999888887 999999999999999999998765332 3344555666666
Q ss_pred CCCCC---CCCccccc--ccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHH
Q 000399 1432 DQVGM---LNSNTLSS--GILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSA 1506 (1566)
Q Consensus 1432 ~~~~~---~~~~~~~~--~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~s 1506 (1566)
..... ..+..+.. .+.++.|+|+ |+++++++.|+++++||++.+.++..+.+|... +.+
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~fsp~----------~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~------~~~ 381 (456)
T KOG0266|consen 318 ETGSKLCLKLLSGAENSAPVTSVQFSPN----------GKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNL------VRC 381 (456)
T ss_pred CCCceeeeecccCCCCCCceeEEEECCC----------CcEEEEecCCCeEEEEEccCCcceeeecccCCc------cee
Confidence 55551 22233322 4677777766 999999999999999999999999999988442 111
Q ss_pred hhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeecc-CceeeEeeeecc
Q 000399 1507 ICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH-DGYVTKVRIISK 1565 (1566)
Q Consensus 1507 v~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH-~~~V~~Vafspd 1565 (1566)
+. ....++.|+++++|+.|+.|++||..++..+..+.+| ...|..++++|.
T Consensus 382 ~~--------~~~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~~~~~~~~~~~~~ 433 (456)
T KOG0266|consen 382 IF--------SPTLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHSKAAVSDLSSHPT 433 (456)
T ss_pred Ee--------cccccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCCCCceeccccCCC
Confidence 11 1112578899999999999999999999999999999 888999998874
No 166
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.90 E-value=1.5e-25 Score=262.32 Aligned_cols=198 Identities=15% Similarity=0.101 Sum_probs=162.1
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccc-cchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~-~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.|++.+.||+|+||+||++.+. .++..||+|.+.......... ..+. +|+.+++.++||||++++
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~------~~~~~vavK~~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 66 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVR------ATGKMYACKKLEKKRIKKRKGEAMAL--------NEKQILEKVNSRFVVSLA 66 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEc------CCCceEEEEEEehhhhhhhhhHHHHH--------HHHHHHHhcCCCCEeeee
Confidence 4889999999999999988753 468899999987643322211 2223 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+.+++.+|+||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+||++++++ .++|+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~~l~ 144 (285)
T cd05605 67 YAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYG--HIRIS 144 (285)
T ss_pred eeecCCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCC--CEEEe
Confidence 999999999999999986 998888644345588999999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... .....|++.|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 145 Dfg~~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~-------l~el~~g~~p 200 (285)
T cd05605 145 DLGLAVEIPEGET------------IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCL-------IYEMIEGKSP 200 (285)
T ss_pred eCCCceecCCCCc------------cccccCCCCccCcHHhcCCCCCccccchhHHHH-------HHHHHHCCCC
Confidence 9999875431100 012247889999999988889999999999987 6666778764
No 167
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.90 E-value=1.5e-25 Score=267.84 Aligned_cols=193 Identities=18% Similarity=0.190 Sum_probs=157.4
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLLKT 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l~~~~~~ 246 (1566)
+.||+|+||.||+|++. .++..+|+|++.+.........+.+. +|+.++..+ +||||+++++++.+
T Consensus 1 ~~lG~G~~g~V~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~e~~~~~~~~~~~~i~~~~~~~~~ 67 (327)
T cd05617 1 RVIGRGSYAKVLLVRLK------KNDQIYAMKVVKKELVHDDEDIDWVQ-------TEKHVFEQASSNPFLVGLHSCFQT 67 (327)
T ss_pred CeeeeCCCeEEEEEEEC------CCCCEEEEEEEEHHHhhhhhHHHHHH-------HHHHHHHhhcCCCCEeeEEEEEEe
Confidence 47999999999998863 56889999999875433222222222 588888777 69999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
.+.+|+||||+++ +|..++.. .+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 68 ~~~~~lv~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~--~~kl~Dfg~~ 143 (327)
T cd05617 68 TSRLFLVIEYVNGGDLMFHMQR--QRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADG--HIKLTDYGMC 143 (327)
T ss_pred CCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCC--CEEEeccccc
Confidence 9999999999987 99888863 34589999999999999999999999999999999999999998 7999999998
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+....... . .....||+.|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 144 ~~~~~~~~-----~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvi-------l~ell~g~~p 195 (327)
T cd05617 144 KEGLGPGD-----T------TSTFCGTPNYIAPEILRGEEYGFSVDWWALGVL-------MFEMMAGRSP 195 (327)
T ss_pred eeccCCCC-----c------eecccCCcccCCHHHHCCCCCCchheeehhHHH-------HHHHHhCCCC
Confidence 74321100 0 112348999999999999899999999999988 6777788764
No 168
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.90 E-value=2.9e-25 Score=259.48 Aligned_cols=198 Identities=19% Similarity=0.235 Sum_probs=156.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCc---ccCCCccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGC---LRHPNVAP 239 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~---l~HpNIV~ 239 (1566)
+|++.+.||+|+||+||+|+++ .++..+|+|.+.............. +|+.+++. ++||||++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~h~ni~~ 66 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDP------HSGHFVALKSVRVQTNEDGLPLSTV--------REVALLKRLEAFDHPNIVR 66 (288)
T ss_pred CceEeeEEeecCCeEEEEEEEC------CCCcEEEEEEeccCcCCCCCchHHH--------HHHHHHHHhhhcCCCCeee
Confidence 5899999999999999998863 5788999999875432221111222 35555554 47999999
Q ss_pred cccccccc-----CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch
Q 000399 240 VLGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1566)
Q Consensus 240 l~~~~~~~-----~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~ 314 (1566)
+++++... ..+++||||++++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.++
T Consensus 67 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~- 145 (288)
T cd07863 67 LMDVCATSRTDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGG- 145 (288)
T ss_pred eeeeeccccCCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCC-
Confidence 99988642 468999999999999998755445588999999999999999999999999999999999999998
Q ss_pred hhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 315 ~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
.+||+|||+++...... ......+|..|+|||++.+..++...|+|+.|++ .+..+.|++
T Consensus 146 -~~kl~dfg~~~~~~~~~------------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~-------l~~l~~g~~ 205 (288)
T cd07863 146 -QVKLADFGLARIYSCQM------------ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCI-------FAEMFRRKP 205 (288)
T ss_pred -CEEECccCccccccCcc------------cCCCccccccccCchHhhCCCCCCcchhhhHHHH-------HHHHHhCCc
Confidence 79999999998543110 0112347888999999988889999999999987 555566664
Q ss_pred c
Q 000399 395 W 395 (1566)
Q Consensus 395 ~ 395 (1566)
+
T Consensus 206 ~ 206 (288)
T cd07863 206 L 206 (288)
T ss_pred C
Confidence 3
No 169
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.90 E-value=2.9e-24 Score=257.77 Aligned_cols=236 Identities=16% Similarity=0.277 Sum_probs=199.3
Q ss_pred ccccccccccchHHHHHHhhccccCCCceeccC--CCCCCCCCcccccccCccCCCCceEeee-----eehhhhhccCcc
Q 000399 1258 PQRRVYDYHKSSVERQEATSNLMKCEPWFWFPT--PAASWDGPDFLGRVGGLKDESPWKIKAS-----ILSSIRAHHGAL 1330 (1566)
Q Consensus 1258 ~~~~~~~le~~~~~~~~~~~~~~~H~~~V~~fS--pdg~~~~~~~LaSgS~D~~I~vWdl~~~-----~l~tl~gH~~~V 1330 (1566)
+.-|+|++...... ...+|++-|.+.. .+|-+ |+|||.|+++++|.++.+ +++...||++.|
T Consensus 346 ~~lr~y~~~~~~c~------ii~GH~e~vlSL~~~~~g~l-----lat~sKD~svilWr~~~~~~~~~~~a~~~gH~~sv 414 (775)
T KOG0319|consen 346 PELRLYTLPTSYCQ------IIPGHTEAVLSLDVWSSGDL-----LATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSV 414 (775)
T ss_pred CceEEEecCCCceE------EEeCchhheeeeeecccCcE-----EEEecCCceEEEEEecCCcchhhhhhhhccccccc
Confidence 55567755543332 6778999999865 55544 999999999999988543 667788999999
Q ss_pred eeeeecCc-ceEEEeeccCCCcccceeeEEecccc---------cccccccccccccceEEeecCCceeec--cCcEEEe
Q 000399 1331 RSVAVGQD-ECTVFTAGIGPGFKGTVQKWELTRIN---------CVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVW 1398 (1566)
Q Consensus 1331 ~slafspd-~~~LaSgS~~~~~D~tVrlWDl~tg~---------~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLW 1398 (1566)
.+|+++.. ...|+|+|. |+|+++|++...+ +..+-..|...||||+++|..+.+|+| |++.+||
T Consensus 415 gava~~~~~asffvsvS~----D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW 490 (775)
T KOG0319|consen 415 GAVAGSKLGASFFVSVSQ----DCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIW 490 (775)
T ss_pred ceeeecccCccEEEEecC----CceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeee
Confidence 99999774 468999998 9999999997622 122346799999999999999999988 9999999
Q ss_pred ecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEE
Q 000399 1399 NSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLR 1478 (1566)
Q Consensus 1399 Dl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIr 1478 (1566)
+++.++.+.++.+| ..+|.+|.|+|. .+.++|+|.|+||+
T Consensus 491 ~le~~~l~~vLsGH------------------------------~RGvw~V~Fs~~----------dq~laT~SgD~TvK 530 (775)
T KOG0319|consen 491 DLEQLRLLGVLSGH------------------------------TRGVWCVSFSKN----------DQLLATCSGDKTVK 530 (775)
T ss_pred cccCceEEEEeeCC------------------------------ccceEEEEeccc----------cceeEeccCCceEE
Confidence 99999999999886 678999999997 78999999999999
Q ss_pred EEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceee
Q 000399 1479 FIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVT 1558 (1566)
Q Consensus 1479 lWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~ 1558 (1566)
+|.+.++.|+.+|.||...| - ...|-.+|+.|+||+.||.|++|++.+++|+.++.+|+..|.
T Consensus 531 IW~is~fSClkT~eGH~~aV------l-----------ra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvW 593 (775)
T KOG0319|consen 531 IWSISTFSCLKTFEGHTSAV------L-----------RASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVW 593 (775)
T ss_pred EEEeccceeeeeecCcccee------E-----------eeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeE
Confidence 99999999999999995543 2 233446778999999999999999999999999999999999
Q ss_pred Eeeeecc
Q 000399 1559 KVRIISK 1565 (1566)
Q Consensus 1559 ~Vafspd 1565 (1566)
+++-+|+
T Consensus 594 aL~~~~~ 600 (775)
T KOG0319|consen 594 ALSVSPL 600 (775)
T ss_pred EEeecCc
Confidence 9998875
No 170
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.90 E-value=4.7e-25 Score=280.25 Aligned_cols=174 Identities=17% Similarity=0.042 Sum_probs=113.8
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..++|++.+.||+|+||.||+|++.- .....+..+|+|.+...... ..+.+ | .++...+.+++.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~--~~~~~~~~vAvK~~~~~~~~----e~~~~--------e--~l~~~~~~~~~~ 193 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVN--KQSKKEGKYVLKKATEYGAV----EIWMN--------E--RVRRACPNSCAD 193 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcC--CccccCcEEEEEEecccchh----HHHHH--------H--HHHhhchhhHHH
Confidence 45689999999999999999998631 00122788999987542111 11111 1 111222333433
Q ss_pred ccccc------cccCceeeeccCCcc-chhhhhccCccc------------------ccchhHHHHHHHHHHHHHHHHhh
Q 000399 240 VLGLL------KTSGLITSVIPKTPY-TLENILQFSPNA------------------LKSEWHVRFLMYQLLSAIAYLHS 294 (1566)
Q Consensus 240 l~~~~------~~~~~l~LV~E~~~g-sL~~~l~~~~~~------------------~l~~~~~~~i~~Qil~aL~yLH~ 294 (1566)
+...+ .....+++||||+++ +|.+++...... ......++.++.||+.||.|||+
T Consensus 194 ~~~~~~~~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~ 273 (566)
T PLN03225 194 FVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS 273 (566)
T ss_pred HHHhhhcccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 33332 345689999999997 999888632110 01223466799999999999999
Q ss_pred ccccCCCccCCCccccc-cchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccc
Q 000399 295 LGIAHRSVCPSNVLLTD-SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS 361 (1566)
Q Consensus 295 ~gIiHrDLKp~NILl~~-~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l 361 (1566)
++|+||||||+|||++. ++ .+||+|||+|+........ ......+++.|||||.+
T Consensus 274 ~gIiHRDLKP~NILl~~~~~--~~KL~DFGlA~~l~~~~~~----------~~~~~~~t~~Y~APE~~ 329 (566)
T PLN03225 274 TGIVHRDVKPQNIIFSEGSG--SFKIIDLGAAADLRVGINY----------IPKEFLLDPRYAAPEQY 329 (566)
T ss_pred CCEEeCcCCHHHEEEeCCCC--cEEEEeCCCcccccccccc----------CCcccccCCCccChHHh
Confidence 99999999999999986 45 6999999999854321000 01123466777777743
No 171
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=6.4e-25 Score=249.84 Aligned_cols=222 Identities=17% Similarity=0.222 Sum_probs=172.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccccc-chhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESK-NFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~-~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
.++|-++..||+|+|++||+|.+ +...+.||+|+-..++....+.+ .+.+ .++||.+|-+.|+||.||+
T Consensus 462 n~RYLlLhLLGrGGFSEVyKAFD------l~EqRYvAvKIHqlNK~WrdEKKeNYhK----HAcREyrIHKeLDHpRIVK 531 (775)
T KOG1151|consen 462 NDRYLLLHLLGRGGFSEVYKAFD------LTEQRYVAVKIHQLNKNWRDEKKENYHK----HACREYRIHKELDHPRIVK 531 (775)
T ss_pred HHHHHHHHHhccccHHHHHHhcc------cchhheeeEeeehhccchhhHhhhhHHH----HHHHHHhhhhccCcceeee
Confidence 45899999999999999999997 47889999998665544433332 2333 5679999999999999999
Q ss_pred cccccc-ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhc--cccCCCccCCCccccccch-
Q 000399 240 VLGLLK-TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL--GIAHRSVCPSNVLLTDSCW- 314 (1566)
Q Consensus 240 l~~~~~-~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~--gIiHrDLKp~NILl~~~~~- 314 (1566)
+|++|. +.+.+|-|+|||+| +|.-+|+ ..+.+++.+++.|+.||+.||.||.+. -|||-||||.|||+.++..
T Consensus 532 lYDyfslDtdsFCTVLEYceGNDLDFYLK--QhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~Gtac 609 (775)
T KOG1151|consen 532 LYDYFSLDTDSFCTVLEYCEGNDLDFYLK--QHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTAC 609 (775)
T ss_pred eeeeeeeccccceeeeeecCCCchhHHHH--hhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCccc
Confidence 999996 55689999999998 9999998 466789999999999999999999985 5999999999999976543
Q ss_pred hhhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc----ccchhhccccccccccCCchhhhHHHhh
Q 000399 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ----SMDWHSQFNRWWRGELSNFEYLLFLNKL 390 (1566)
Q Consensus 315 ~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~----~~~y~~~~d~Ws~G~isnfeyL~~ln~~ 390 (1566)
..+||+|||+++...+....+...+. ......||.||.+||.|. -...+.++|+|+.|+| ++..+
T Consensus 610 GeIKITDFGLSKIMdddSy~~vdGme----LTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVI-------FyQCl 678 (775)
T KOG1151|consen 610 GEIKITDFGLSKIMDDDSYNSVDGME----LTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVI-------FYQCL 678 (775)
T ss_pred ceeEeeecchhhhccCCccCccccee----eecccCceeeecCcceeecCCCCCccccceeeEeeehh-------hhhhh
Confidence 48999999999987653322111111 223445999999999774 2346678999999999 66666
Q ss_pred ccccc--CCccceeecc
Q 000399 391 AGRRW--GDYTFHMVMP 405 (1566)
Q Consensus 391 agrs~--~dl~q~pv~p 405 (1566)
-||.+ ++.+|-.|+.
T Consensus 679 YGrKPFGhnqsQQdILq 695 (775)
T KOG1151|consen 679 YGRKPFGHNQSQQDILQ 695 (775)
T ss_pred ccCCCCCCchhHHHHHh
Confidence 77764 4555544443
No 172
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.90 E-value=2.8e-25 Score=268.50 Aligned_cols=196 Identities=19% Similarity=0.241 Sum_probs=159.7
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..++|++++.||+|+||.||+|.+. ..+..+|+|.+............+. +|+.+++.++||||++
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~niv~ 80 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDA------VLDRNVAIKKLSRPFQNQTHAKRAY--------RELVLMKCVNHKNIIS 80 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEec------CCCceEEEEEeCCcccChHHHHHHH--------HHHHHHHHhCCCchhc
Confidence 4678999999999999999998763 4678899999875433322223333 6999999999999999
Q ss_pred cccccccc------CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc
Q 000399 240 VLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 240 l~~~~~~~------~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~ 313 (1566)
+++++... ...|+||||++++|.+.+.. .+++..++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~ 156 (355)
T cd07874 81 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 156 (355)
T ss_pred eeeeeeccccccccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCC
Confidence 99988643 35799999999988887752 367788899999999999999999999999999999999988
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
.+||+|||+++...... ......||+.|+|||++.+..++..+|+|+.|++ .+..++|+
T Consensus 157 --~~kl~Dfg~~~~~~~~~------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~~g~ 215 (355)
T cd07874 157 --TLKILDFGLARTAGTSF------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI-------MGEMVRHK 215 (355)
T ss_pred --CEEEeeCcccccCCCcc------------ccCCccccCCccCHHHHcCCCCCchhhHHHHHHH-------HHHHHhCC
Confidence 79999999998543210 1122358899999999999899999999999987 66677776
Q ss_pred c
Q 000399 394 R 394 (1566)
Q Consensus 394 s 394 (1566)
.
T Consensus 216 ~ 216 (355)
T cd07874 216 I 216 (355)
T ss_pred C
Confidence 4
No 173
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.90 E-value=1.1e-23 Score=236.33 Aligned_cols=258 Identities=16% Similarity=0.213 Sum_probs=194.1
Q ss_pred HHhhccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCC
Q 000399 1274 EATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPG 1350 (1566)
Q Consensus 1274 ~~~~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~ 1350 (1566)
....++.+|++.|++ .+|+.+| ++|||.|....+|++.++ ....+.||..+|+++.|+.||.+||||+.
T Consensus 55 dS~~tF~~H~~svFavsl~P~~~l-----~aTGGgDD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdm--- 126 (399)
T KOG0296|consen 55 DSLVTFDKHTDSVFAVSLHPNNNL-----VATGGGDDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDM--- 126 (399)
T ss_pred cceeehhhcCCceEEEEeCCCCce-----EEecCCCceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCC---
Confidence 345668889999998 6888888 999999999999999987 67889999999999999999999999998
Q ss_pred cccceeeEEec------------------------------------------ccccccccccccccccceEEeecCCce
Q 000399 1351 FKGTVQKWELT------------------------------------------RINCVSGYYGHEEVVNDICVLSSSGRI 1388 (1566)
Q Consensus 1351 ~D~tVrlWDl~------------------------------------------tg~~i~tl~gH~~~V~sVafsp~g~~L 1388 (1566)
+|.|+||+.. ++...+.+.||+.++++=.|.|+|+++
T Consensus 127 -sG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~ 205 (399)
T KOG0296|consen 127 -SGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRI 205 (399)
T ss_pred -CccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceE
Confidence 6666666653 333345678999999999999999999
Q ss_pred eec--cCcEEEeecCCCcEEEEeecccccccc------------cCCCC--------CcccccccCC-CCCCCCcccccc
Q 000399 1389 ASC--DGTLHVWNSQTGKLLSVFAEQSMDSLH------------GGSPS--------SSISKINTDQ-VGMLNSNTLSSG 1445 (1566)
Q Consensus 1389 aSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~------------~~~~~--------~~~~~~~~~~-~~~~~~~~~~~~ 1445 (1566)
+++ ||+|++||+.+|+++..+......... .+... ..+++..... ........+...
T Consensus 206 ~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~ 285 (399)
T KOG0296|consen 206 LTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEEL 285 (399)
T ss_pred EEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhh
Confidence 887 999999999999999888632111000 01011 1111111111 111112234455
Q ss_pred cccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchh
Q 000399 1446 ILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS 1525 (1566)
Q Consensus 1446 V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~ 1525 (1566)
+.|+.+.|. +..-.+.++|+-||+|.|||....+..+.+. |...|..+.|-+. .
T Consensus 286 ~esve~~~~-------ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~-------he~~V~~l~w~~t------------~ 339 (399)
T KOG0296|consen 286 DESVESIPS-------SSKLPLAACGSVDGTIAIYDLAASTLRHICE-------HEDGVTKLKWLNT------------D 339 (399)
T ss_pred hhhhhhccc-------ccccchhhcccccceEEEEecccchhheecc-------CCCceEEEEEcCc------------c
Confidence 556655553 1224688999999999999999777665554 3444667776542 4
Q ss_pred HHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1526 WIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1526 ~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
+|+++..||.|+.||.|+|+++.++.||...|.+.+++|++
T Consensus 340 ~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~ 380 (399)
T KOG0296|consen 340 YLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQK 380 (399)
T ss_pred hheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCC
Confidence 89999999999999999999999999999999999999974
No 174
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.90 E-value=9.6e-25 Score=247.01 Aligned_cols=216 Identities=18% Similarity=0.314 Sum_probs=185.0
Q ss_pred CCCceeccCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEe
Q 000399 1282 CEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWEL 1360 (1566)
Q Consensus 1282 H~~~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl 1360 (1566)
|.-.+....|+|+. |++|+..|...+|+..+- ....+.+|..+|+++.|+++|.+++||+. ||.||+|+.
T Consensus 97 c~V~~v~WtPeGRR-----Lltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~----gG~iKyWqp 167 (464)
T KOG0284|consen 97 CPVNVVRWTPEGRR-----LLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDK----GGMIKYWQP 167 (464)
T ss_pred cceeeEEEcCCCce-----eEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCC----CceEEeccc
Confidence 33334447999998 999999999999998653 34456799999999999999999999998 899999997
Q ss_pred ccccccccccc-ccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCC
Q 000399 1361 TRINCVSGYYG-HEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGML 1437 (1566)
Q Consensus 1361 ~tg~~i~tl~g-H~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~ 1437 (1566)
.-. .+..+.+ |...|.+++|+|....++|| ||+|+|||....+..+++.+|
T Consensus 168 nmn-nVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GH------------------------- 221 (464)
T KOG0284|consen 168 NMN-NVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGH------------------------- 221 (464)
T ss_pred chh-hhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccC-------------------------
Confidence 644 4445555 45999999999999888877 999999999999888888776
Q ss_pred CCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccC
Q 000399 1438 NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQA 1517 (1566)
Q Consensus 1438 ~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~ 1517 (1566)
.-.|.+++|||. -..+++||.|..|++||.++|+|+.++.+| ...|.++.|+
T Consensus 222 -----gwdVksvdWHP~----------kgLiasgskDnlVKlWDprSg~cl~tlh~H------KntVl~~~f~------- 273 (464)
T KOG0284|consen 222 -----GWDVKSVDWHPT----------KGLIASGSKDNLVKLWDPRSGSCLATLHGH------KNTVLAVKFN------- 273 (464)
T ss_pred -----CCCcceeccCCc----------cceeEEccCCceeEeecCCCcchhhhhhhc------cceEEEEEEc-------
Confidence 344789999997 569999999999999999999999998877 4445556555
Q ss_pred CCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeec
Q 000399 1518 GGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIIS 1564 (1566)
Q Consensus 1518 ~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafsp 1564 (1566)
+++.||+|+|.|..++++|+|+.+.+.++++|...|++++|+|
T Consensus 274 ----~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP 316 (464)
T KOG0284|consen 274 ----PNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHP 316 (464)
T ss_pred ----CCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeecccc
Confidence 6668999999999999999999999999999999999999998
No 175
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.90 E-value=1.1e-23 Score=241.94 Aligned_cols=253 Identities=14% Similarity=0.197 Sum_probs=195.4
Q ss_pred ceec--cCCCCCCCCCcccccccCccCCCCceEeeeeehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecc
Q 000399 1285 WFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR 1362 (1566)
Q Consensus 1285 ~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~t 1362 (1566)
-|.+ ++.+|.. ||+|+.||.+++|+..++.+.++..|.++|.++.|+.+|++++|++. |+++.+||..+
T Consensus 237 dVT~L~Wn~~G~~-----LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~v----D~ttilwd~~~ 307 (524)
T KOG0273|consen 237 DVTSLDWNNDGTL-----LATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGV----DGTTILWDAHT 307 (524)
T ss_pred CcceEEecCCCCe-----EEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccC----CccEEEEeccC
Confidence 3444 5666777 99999999999999999999999999999999999999999999999 99999999977
Q ss_pred cccccccccccccccceEEeecCCceeec-cCcEEEeecCCCcEEEEeeccccc-----------ccccCCCCCcccccc
Q 000399 1363 INCVSGYYGHEEVVNDICVLSSSGRIASC-DGTLHVWNSQTGKLLSVFAEQSMD-----------SLHGGSPSSSISKIN 1430 (1566)
Q Consensus 1363 g~~i~tl~gH~~~V~sVafsp~g~~LaSg-DgtIkLWDl~tg~~l~~l~~h~~~-----------~~~~~~~~~~~~~~~ 1430 (1566)
|.+...+.-|..+-.+|.|-....+..+. |+.|+|+-+...+++.++.+|+.. ...+++.+...++|.
T Consensus 308 g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs 387 (524)
T KOG0273|consen 308 GTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWS 387 (524)
T ss_pred ceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeee
Confidence 76666666666555556665554444333 666666666666666666666544 222344455555665
Q ss_pred cCCCC-CCCCcccccccccccccchhHHHhhhhh-ccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhh
Q 000399 1431 TDQVG-MLNSNTLSSGILSTAFDGNLYTCLHHIE-CVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAIC 1508 (1566)
Q Consensus 1431 ~~~~~-~~~~~~~~~~V~svafsp~~~t~v~~~p-dg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~ 1508 (1566)
....+ .-.+..|+..|..+.|+|.+ ++.-+| ++..+++++.|++|++||+..|.++++|..| ..+|++++
T Consensus 388 ~~~~~~~~~l~~Hskei~t~~wsp~g--~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH------~~pVysva 459 (524)
T KOG0273|consen 388 MGQSNSVHDLQAHSKEIYTIKWSPTG--PVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKH------QEPVYSVA 459 (524)
T ss_pred cCCCcchhhhhhhccceeeEeecCCC--CccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccC------CCceEEEE
Confidence 43333 33455678888888888873 333333 5678999999999999999999999999876 56677776
Q ss_pred ccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1509 ACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1509 ~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
|+ |+|+++|+|+.||.|.+|++++++.++.+.+ ++.|..|+|+-+|
T Consensus 460 fS-----------~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~-~~~Ifel~Wn~~G 505 (524)
T KOG0273|consen 460 FS-----------PNGRYLASGSLDGCVHIWSTKTGKLVKSYQG-TGGIFELCWNAAG 505 (524)
T ss_pred ec-----------CCCcEEEecCCCCeeEeccccchheeEeecC-CCeEEEEEEcCCC
Confidence 65 6778999999999999999999999999986 5779999998775
No 176
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.90 E-value=1.9e-25 Score=282.86 Aligned_cols=201 Identities=19% Similarity=0.209 Sum_probs=166.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
++.....||.|.||.||-|.+ .++|...|+|.+.-........+.+. +|..+|..++|||||++||
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN------~~tGellAvKEI~iq~~~~k~~~~i~--------eEm~vlE~lnHpNlV~YyG 1301 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVN------LDTGELLAVKEIKIQDSDHKTFKLIA--------EEMKVLEGLNHPNLVRYYG 1301 (1509)
T ss_pred eeccccccCCcceeeeEEeec------CCccchhhhhhhhcCccccccCcchH--------HHHHHHHhccCccccccCc
Confidence 677889999999999998875 58999999999876544433333333 6999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
+-.+.+..+|.||||.+ +|.+++.. ++...+...+.|..|++.|+.|||+.|||||||||+||+|+.+| .+|+.|
T Consensus 1302 VEvHRekv~IFMEyC~~GsLa~ll~~--gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g--~iK~~D 1377 (1509)
T KOG4645|consen 1302 VEVHREKVYIFMEYCEGGSLASLLEH--GRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNG--LIKYGD 1377 (1509)
T ss_pred eeecHHHHHHHHHHhccCcHHHHHHh--cchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCC--cEEeec
Confidence 99999999999999996 99999983 44467777889999999999999999999999999999999999 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc---hhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD---WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~---y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||.|.......+.. ... ..+..||+.|||||++.+.. -..+.|+|+.||+ .+++.+||++
T Consensus 1378 FGsa~ki~~~~~~~---~~e----l~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCV-------VlEM~tGkrP 1440 (1509)
T KOG4645|consen 1378 FGSAVKIKNNAQTM---PGE----LQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCV-------VLEMATGKRP 1440 (1509)
T ss_pred ccceeEecCchhcC---CHH----HHhhcCCchhcCchhhcccccCCCCcchhhhcccce-------EEEeecCCCc
Confidence 99999766421110 011 12456999999999997544 4458899999999 8999999874
No 177
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.90 E-value=4.4e-25 Score=267.72 Aligned_cols=196 Identities=19% Similarity=0.253 Sum_probs=160.1
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..++|++.+.||+|+||.||+|.+. ..+..+|||++............+. +|+.+++.++||||++
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~ii~ 87 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDA------ILERNVAIKKLSRPFQNQTHAKRAY--------RELVLMKCVNHKNIIG 87 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEEC------CCCcEEEEEEeCccccCchhHHHHH--------HHHHHHHhcCCCCccc
Confidence 4678999999999999999998863 4678899999875433322223333 5999999999999999
Q ss_pred cccccccc------CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc
Q 000399 240 VLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 240 l~~~~~~~------~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~ 313 (1566)
+++++... ..+|+||||++++|.+.+.. .++...++.++.|++.||.|||++||+||||||+|||++.++
T Consensus 88 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~ 163 (364)
T cd07875 88 LLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 163 (364)
T ss_pred cceeecccccccccCeEEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCC
Confidence 99988643 35799999999988888752 367788899999999999999999999999999999999998
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
.+||+|||+++..... .......+|+.|+|||++.+..++..+|+|+.|++ .+..+.|+
T Consensus 164 --~~kL~DfG~a~~~~~~------------~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~i-------l~ell~g~ 222 (364)
T cd07875 164 --TLKILDFGLARTAGTS------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI-------MGEMIKGG 222 (364)
T ss_pred --cEEEEeCCCccccCCC------------CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHH-------HHHHHhCC
Confidence 7999999999854320 01122358899999999999899999999999988 66777776
Q ss_pred c
Q 000399 394 R 394 (1566)
Q Consensus 394 s 394 (1566)
.
T Consensus 223 ~ 223 (364)
T cd07875 223 V 223 (364)
T ss_pred C
Confidence 4
No 178
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.89 E-value=4.8e-25 Score=261.73 Aligned_cols=196 Identities=18% Similarity=0.178 Sum_probs=151.5
Q ss_pred ceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccc
Q 000399 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1566)
Q Consensus 167 ~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~ 246 (1566)
.++||+|+||+||+|+++ ...++..+|+|.+...... .... +|+.+|+.++||||+++++++..
T Consensus 6 ~~~lG~G~~g~Vy~~~~~----~~~~~~~~aiK~~~~~~~~----~~~~--------~E~~~l~~l~h~niv~~~~~~~~ 69 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRK----DGKDDRDYALKQIEGTGIS----MSAC--------REIALLRELKHPNVISLQKVFLS 69 (317)
T ss_pred ccccccCCCeEEEEEEEc----cCCCCceEEEEEECCCCCc----HHHH--------HHHHHHHhcCCCCCcceeeeEec
Confidence 568999999999998752 1245678999988643211 1122 69999999999999999999854
Q ss_pred --cCceeeeccCCccchhhhhccCc-------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccc----ccc
Q 000399 247 --SGLITSVIPKTPYTLENILQFSP-------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT----DSC 313 (1566)
Q Consensus 247 --~~~l~LV~E~~~gsL~~~l~~~~-------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~----~~~ 313 (1566)
+..+|+||||++++|.+++.... ...+++..++.++.||+.||.|||++||+||||||+|||++ .++
T Consensus 70 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~ 149 (317)
T cd07868 70 HADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG 149 (317)
T ss_pred CCCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcC
Confidence 45789999999999988875321 22478888999999999999999999999999999999994 334
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~ag 392 (1566)
.+||+|||+|+........ ........+|+.|+|||++.+ ..|+..+|+|+.|++ .+..+.|
T Consensus 150 --~~kl~DfG~a~~~~~~~~~--------~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~i-------l~el~~g 212 (317)
T cd07868 150 --RVKIADMGFARLFNSPLKP--------LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI-------FAELLTS 212 (317)
T ss_pred --cEEEeecCceeccCCCCcc--------ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHH-------HHHHHhC
Confidence 7999999999864421100 001123458999999998876 458889999999987 6777778
Q ss_pred ccc
Q 000399 393 RRW 395 (1566)
Q Consensus 393 rs~ 395 (1566)
+++
T Consensus 213 ~~~ 215 (317)
T cd07868 213 EPI 215 (317)
T ss_pred CCC
Confidence 754
No 179
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.89 E-value=6.9e-25 Score=283.54 Aligned_cols=211 Identities=18% Similarity=0.103 Sum_probs=163.5
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
++|++.+.||+|+||.||+|++. .++..||+|++........ ...+++ +|+++++.++||||+++
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~------~tg~~VAIK~I~~~l~~~e~~~~rfl--------rEi~ILs~L~HPNIVkl 67 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDP------VCSRRVALKKIREDLSENPLLKKRFL--------REAKIAADLIHPGIVPV 67 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEEC------CCCcEEEEEEECcccccCHHHHHHHH--------HHHHHHHhCCCcCcCeE
Confidence 57999999999999999998863 4688899999875432222 122344 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCc---------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccc
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP---------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~---------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~ 310 (1566)
++++.+++..|+||||++| +|.+++.... ....+...+..++.||+.||.|||++||+||||||+|||++
T Consensus 68 ~~v~~d~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd 147 (932)
T PRK13184 68 YSICSDGDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLG 147 (932)
T ss_pred EEEEeeCCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEc
Confidence 9999999999999999997 9999886311 11234456778999999999999999999999999999999
Q ss_pred ccchhhhhhcCcCCCCccccccccC--CCCC-----CceeeeecCCcccccccccccccccchhhccccccccccCCchh
Q 000399 311 DSCWSWLYICDKPLVGFNSIADWCT--IPTS-----PMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEY 383 (1566)
Q Consensus 311 ~~~~~~vKL~DFGlA~~~~~~~~~~--~~~~-----~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfey 383 (1566)
.++ .+||+|||+|+......... .... ...........||+.|||||++.+..++..+|+|+.|++
T Consensus 148 ~dg--~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVI----- 220 (932)
T PRK13184 148 LFG--EVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVI----- 220 (932)
T ss_pred CCC--CEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHH-----
Confidence 988 79999999998652111000 0000 000001123468999999999999899999999999988
Q ss_pred hhHHHhhccccc
Q 000399 384 LLFLNKLAGRRW 395 (1566)
Q Consensus 384 L~~ln~~agrs~ 395 (1566)
.+..++|+.+
T Consensus 221 --LyELLTG~~P 230 (932)
T PRK13184 221 --LYQMLTLSFP 230 (932)
T ss_pred --HHHHHHCCCC
Confidence 7777888754
No 180
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.89 E-value=6.3e-25 Score=262.95 Aligned_cols=196 Identities=17% Similarity=0.185 Sum_probs=163.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||.||++++. .++..+|+|.+.... ......++. +|+++|+.++||||+++
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~ 68 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHK------PSGLIMARKLIHLEI-KPAIRNQII--------RELQVLHECNSPYIVGF 68 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEEC------CCCcEEEEEEeeccc-CHHHHHHHH--------HHHHHHHHCCCCCCCeE
Confidence 368999999999999999998863 568889999987532 111122333 69999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhc-cccCCCccCCCccccccchhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~-gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
++++..++.+++||||+++ +|.+++.. ...+++..+..++.|++.||.|||++ +|+||||||+|||++.++ .+|
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~--~~k 144 (331)
T cd06649 69 YGAFYSDGEISICMEHMDGGSLDQVLKE--AKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRG--EIK 144 (331)
T ss_pred EEEEEECCEEEEEeecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCC--cEE
Confidence 9999999999999999997 99999973 34578888999999999999999986 699999999999999998 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||+++..... ......|++.|+|||++.+..++...|+|+.|++ .+..++|+.+
T Consensus 145 l~Dfg~~~~~~~~-------------~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~tg~~p 201 (331)
T cd06649 145 LCDFGVSGQLIDS-------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS-------LVELAIGRYP 201 (331)
T ss_pred EccCccccccccc-------------ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHH-------HHHHHhCCCC
Confidence 9999998754310 0112348899999999998889999999999987 6777888754
No 181
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.89 E-value=6.2e-25 Score=267.56 Aligned_cols=206 Identities=18% Similarity=0.160 Sum_probs=160.3
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|++.- .+...++..||+|.+...... .....++ +|+.+|+.+ +|||||+
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~-~~~~~~~~~vavK~~~~~~~~-~~~~~~~--------~E~~il~~l~~h~nIv~ 106 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFG-LGKEDNVLRVAVKMLKASAHT-DEREALM--------SELKILSHLGQHKNIVN 106 (374)
T ss_pred HHHceehheecCCCcccEEEEEEec-CCcccccceeEEEeccCCCCH-HHHHHHH--------HHHHHHHhhccCCceee
Confidence 4589999999999999999887421 222345678999998754222 1122233 599999999 8999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCc-------------------------------------------------
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSP------------------------------------------------- 269 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~------------------------------------------------- 269 (1566)
+++++...+.+|+||||+++ +|.++++...
T Consensus 107 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (374)
T cd05106 107 LLGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRP 186 (374)
T ss_pred EeeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCC
Confidence 99999999999999999996 9999885321
Q ss_pred -------------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCcccc
Q 000399 270 -------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSI 330 (1566)
Q Consensus 270 -------------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~~~ 330 (1566)
..+++...++.++.||+.||.|||++||+||||||+|||+++++ .+||+|||+++....
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~--~~kL~DfGla~~~~~ 264 (374)
T cd05106 187 VSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGR--VAKICDFGLARDIMN 264 (374)
T ss_pred ccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCC--eEEEeeceeeeeccC
Confidence 12356677889999999999999999999999999999999888 799999999985432
Q ss_pred ccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 331 ADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
... ........++..|||||++.+..++...|+|+.|++ .++.++ |+.
T Consensus 265 ~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvi-------l~ellt~G~~ 313 (374)
T cd05106 265 DSN---------YVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL-------LWEIFSLGKS 313 (374)
T ss_pred Ccc---------eeeccCCCCccceeCHHHhcCCCCCccccHHHHHHH-------HHHHHhCCCC
Confidence 100 011122335667999999988889999999999987 666665 665
No 182
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.89 E-value=5.3e-25 Score=257.05 Aligned_cols=192 Identities=16% Similarity=0.088 Sum_probs=155.8
Q ss_pred eeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCcccccccccccC
Q 000399 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1566)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~ 248 (1566)
||+|+||+||++.++ .++..+|+|.+.+...... ....+. +|+.+|+.++||||+++++++....
T Consensus 1 lg~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~i~~~~~~~~~~~ 66 (280)
T cd05608 1 LGKGGFGEVSACQMR------ATGKLYACKKLNKKRLKKRKGYEGAM--------VEKRILAKVHSRFIVSLAYAFQTKT 66 (280)
T ss_pred CCCCCceeEEEEEEc------cCCcEEEEEeeeHHHHhhhHHHHHHH--------HHHHHHHhCCCCcEeeeeEEEcCCC
Confidence 699999999988763 5788999999876533222 112222 5899999999999999999999999
Q ss_pred ceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 249 LITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 249 ~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
.+|+||||+++ +|.+++... ....+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+|||++
T Consensus 67 ~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~~l~dfg~~ 144 (280)
T cd05608 67 DLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDG--NVRISDLGLA 144 (280)
T ss_pred eEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEeeCccc
Confidence 99999999986 998877431 234578899999999999999999999999999999999999988 7999999999
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+....... ......||+.|+|||++.+..++...|+|+.|++ .+..++|+.+
T Consensus 145 ~~~~~~~~-----------~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~i-------l~el~~g~~p 196 (280)
T cd05608 145 VELKDGQS-----------KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVT-------LYEMIAARGP 196 (280)
T ss_pred eecCCCCc-----------cccccCCCcCccCHHHhcCCCCCccccHHHHHHH-------HHHHHhCCCC
Confidence 75432110 0122358899999999999899999999999987 6777778754
No 183
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.89 E-value=8.2e-25 Score=264.87 Aligned_cols=180 Identities=18% Similarity=0.170 Sum_probs=152.4
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|++++.||+|+||.||+|++. .++..||+|+..+.. ..+|+.+|+.++||||++++
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~------~~~~~valK~~~~~~----------------~~~E~~~l~~l~h~~iv~~~ 123 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKP------GQPDPVVLKIGQKGT----------------TLIEAMLLQNVNHPSVIRMK 123 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEEC------CCCceEEEEeCCccc----------------cHHHHHHHHhCCCCCCcChh
Confidence 47999999999999999998863 457788999743321 12588899999999999999
Q ss_pred ccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
+++......++|||++.++|.+++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 124 ~~~~~~~~~~lv~e~~~~~l~~~l~~-~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~--~~kl~D 200 (357)
T PHA03209 124 DTLVSGAITCMVLPHYSSDLYTYLTK-RSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVD--QVCIGD 200 (357)
T ss_pred heEEeCCeeEEEEEccCCcHHHHHHh-ccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEec
Confidence 99999999999999999999998864 334578889999999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
||+++..... . ...+..||..|+|||++.+..|+..+|+|+.|++
T Consensus 201 fG~a~~~~~~--------~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvv 245 (357)
T PHA03209 201 LGAAQFPVVA--------P----AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIV 245 (357)
T ss_pred CccccccccC--------c----ccccccccccccCCeecCCCCCCchhhHHHHHHH
Confidence 9999753310 0 0123358899999999998899999999999987
No 184
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.89 E-value=6.9e-25 Score=275.53 Aligned_cols=201 Identities=13% Similarity=0.123 Sum_probs=160.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
..|.+.+.||+|+||.||+|.+.. ..+..+|+|.+.... ........ +|+.+|+.++|||||+++
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~-----~~~~~vv~K~~~~~~---~~~~~~~~-------~E~~~l~~l~Hpniv~~~ 131 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGS-----DPKEKVVAKFVMLND---ERQAAYAR-------SELHCLAACDHFGIVKHF 131 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcC-----CCCeEEEEEEcccCC---HHHHHHHH-------HHHHHHHhCCCCCEeEEE
Confidence 359999999999999999987531 225677888764321 11122222 699999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++...+.+||||||+++ +|.+++... ...++++..+..++.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 132 ~~~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~--~~k 209 (478)
T PTZ00267 132 DDFKSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTG--IIK 209 (478)
T ss_pred EEEEECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCC--cEE
Confidence 999999999999999986 999888531 234578889999999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||+++........ .......||+.|+|||++.+..++..+|+|+.|++ .+..++|+.+
T Consensus 210 L~DFgla~~~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~-------l~el~tg~~P 270 (478)
T PTZ00267 210 LGDFGFSKQYSDSVSL---------DVASSFCGTPYYLAPELWERKRYSKKADMWSLGVI-------LYELLTLHRP 270 (478)
T ss_pred EEeCcCceecCCcccc---------ccccccCCCccccCHhHhCCCCCCcHHhHHHHHHH-------HHHHHhCCCC
Confidence 9999999864421000 01123458999999999999899999999999988 6777788654
No 185
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.89 E-value=3.3e-23 Score=238.19 Aligned_cols=258 Identities=16% Similarity=0.186 Sum_probs=205.0
Q ss_pred CCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-----eehhhh------hc----cCcceeeeecCcceEEEe
Q 000399 1282 CEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-----ILSSIR------AH----HGALRSVAVGQDECTVFT 1344 (1566)
Q Consensus 1282 H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-----~l~tl~------gH----~~~V~slafspd~~~LaS 1344 (1566)
|+..|.+ ++|-.. +++++|+.|-+.++|++... ....++ ++ +..|++++|+.+|+.||+
T Consensus 177 ~~~~V~~~~WnP~~~----~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~Lat 252 (524)
T KOG0273|consen 177 HESEVFICAWNPLRD----GLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLAT 252 (524)
T ss_pred CCCceEEEecCchhh----hhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEE
Confidence 6666665 555333 23999999999999998631 111122 22 368999999999999999
Q ss_pred eccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeeccccc-------
Q 000399 1345 AGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMD------- 1415 (1566)
Q Consensus 1345 gS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~------- 1415 (1566)
|+. ||.+++|+. +|..+.+|..|.++|.++.|+..|.+|+|+ |+++.+||..+|.....+..|+..
T Consensus 253 G~~----~G~~riw~~-~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~s~~~lDVdW~ 327 (524)
T KOG0273|consen 253 GSE----DGEARIWNK-DGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFHSAPALDVDWQ 327 (524)
T ss_pred eec----CcEEEEEec-CchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeeccCCccceEEe
Confidence 997 999999996 577789999999999999999999999877 999999999999999988876543
Q ss_pred ---ccccCCCCCcccccc-cCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeee
Q 000399 1416 ---SLHGGSPSSSISKIN-TDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLW 1491 (1566)
Q Consensus 1416 ---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~ 1491 (1566)
.+.+.+.+..+.+.. +.......+.+|.+.|.++.|+|. |.+|+++|.|+|+++|....+.+.+.+
T Consensus 328 ~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~t----------g~LLaS~SdD~TlkiWs~~~~~~~~~l 397 (524)
T KOG0273|consen 328 SNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPT----------GSLLASCSDDGTLKIWSMGQSNSVHDL 397 (524)
T ss_pred cCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCC----------CceEEEecCCCeeEeeecCCCcchhhh
Confidence 111222222222222 233444556779999999999987 899999999999999999999999999
Q ss_pred ccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1492 RGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1492 ~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
.+|. ..|..+.++|.+.... -...+..|++++.|++|++||+..|.++.++..|..+|++|+|+|+|
T Consensus 398 ~~Hs------kei~t~~wsp~g~v~~--n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g 464 (524)
T KOG0273|consen 398 QAHS------KEIYTIKWSPTGPVTS--NPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNG 464 (524)
T ss_pred hhhc------cceeeEeecCCCCccC--CCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCC
Confidence 8874 4567888888775322 22456789999999999999999999999999999999999999987
No 186
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.89 E-value=1.4e-23 Score=253.69 Aligned_cols=249 Identities=16% Similarity=0.206 Sum_probs=195.4
Q ss_pred cccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccce
Q 000399 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1566)
Q Consensus 1279 ~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tV 1355 (1566)
+..|.+.|+. |+|.+.+ ++|||+|.+|+||+.++. ++.++.||-+-|+.+.|++.-.+++|+|. |.||
T Consensus 47 FdeHdGpVRgv~FH~~qpl-----FVSGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASD----DQTI 117 (1202)
T KOG0292|consen 47 FDEHDGPVRGVDFHPTQPL-----FVSGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASD----DQTI 117 (1202)
T ss_pred hhccCCccceeeecCCCCe-----EEecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccC----CCeE
Confidence 4569999998 9999988 999999999999999986 89999999999999999999999999998 9999
Q ss_pred eeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCccccc-ccC
Q 000399 1356 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKI-NTD 1432 (1566)
Q Consensus 1356 rlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~-~~~ 1432 (1566)
+||+..+++|+++++||...|.|..|+|....+||+ |.+|||||+..-+. +......-........ .+..++ ..+
T Consensus 118 rIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGLRk-k~~~pg~~e~~~~~~~-~~~dLfg~~D 195 (1202)
T KOG0292|consen 118 RIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGLRK-KNKAPGSLEDQMRGQQ-GNSDLFGQTD 195 (1202)
T ss_pred EEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecchhc-cCCCCCCchhhhhccc-cchhhcCCcC
Confidence 999999999999999999999999999999999888 99999999862111 1111100000000000 111122 122
Q ss_pred CCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCc--eeeeeccCCcccCchhhHHHhhcc
Q 000399 1433 QVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQ--KLHLWRGEPTELGFPSLVSAICAC 1510 (1566)
Q Consensus 1433 ~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~--~l~~~~~h~~~v~~~~~V~sv~~s 1510 (1566)
-.--..+.+|..+|+.++|+|. -..+++|+.|..|++|....-+ .+.+.++| .+.|+++-|+
T Consensus 196 aVVK~VLEGHDRGVNwaAfhpT----------lpliVSG~DDRqVKlWrmnetKaWEvDtcrgH------~nnVssvlfh 259 (1202)
T KOG0292|consen 196 AVVKHVLEGHDRGVNWAAFHPT----------LPLIVSGADDRQVKLWRMNETKAWEVDTCRGH------YNNVSSVLFH 259 (1202)
T ss_pred eeeeeeecccccccceEEecCC----------cceEEecCCcceeeEEEeccccceeehhhhcc------cCCcceEEec
Confidence 2333456789999999999997 5799999999999999987433 23344444 5567777776
Q ss_pred CCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeecc
Q 000399 1511 GSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1511 ~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafspd 1565 (1566)
|.. ..|+|.|+|+.|++||+...+.+++++--.+.-..++.+|.
T Consensus 260 p~q-----------~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~ 303 (1202)
T KOG0292|consen 260 PHQ-----------DLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPE 303 (1202)
T ss_pred Ccc-----------ceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCC
Confidence 544 58999999999999999999999999765666777777775
No 187
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=1.2e-25 Score=243.09 Aligned_cols=189 Identities=21% Similarity=0.307 Sum_probs=155.1
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
-+.+..+.||-|+||+||-++|. .+|+.||+|++..-.......+. .+||+.+|..++|.||+..+
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDP------RdgrrvalkK~pnvfq~L~s~kr--------vFre~kmLcfFkHdNVLSaL 118 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDP------RSGKRVALKKMPNVFQNLASCKR--------VFREIKMLSSFRHDNVLSLL 118 (449)
T ss_pred ccCCCCCcccccceeEEEeccCC------CCccchhHhhcchHHHHHHHHHH--------HHHHHHHHHhhccccHHHHH
Confidence 35677899999999999988873 68999999998754333333333 34799999999999999999
Q ss_pred ccccccC-----ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 242 GLLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 242 ~~~~~~~-----~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
++..-.. .+|+|+|++..+|..+|- ....++..+++-+++||++||+|||+.+|.||||||.|+|++.++ .
T Consensus 119 DILQPph~dfFqEiYV~TELmQSDLHKIIV--SPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNC--v 194 (449)
T KOG0664|consen 119 DILQPANPSFFQELYVLTELMQSDLHKIIV--SPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNC--I 194 (449)
T ss_pred HhcCCCCchHHHHHHHHHHHHHhhhhheec--cCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCc--e
Confidence 9887553 689999999999999997 345688999999999999999999999999999999999999999 8
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhcccccccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGEL 378 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~i 378 (1566)
+||||||+||.....+. . .++.-+-|-+|+|||++.+. .|+..+|+|+.|||
T Consensus 195 LKICDFGLARvee~d~~-----~-----hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCI 247 (449)
T KOG0664|consen 195 LKICDFGLARTWDQRDR-----L-----NMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCI 247 (449)
T ss_pred EEecccccccccchhhh-----h-----hhHHHHHHHHhccHHHhhcchhhcCccceehhhHH
Confidence 99999999995432110 0 11222467889999999764 68999999999998
No 188
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.89 E-value=1.2e-24 Score=256.91 Aligned_cols=198 Identities=15% Similarity=0.119 Sum_probs=153.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhcc----------CCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCC
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLS----------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 230 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~----------~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~ 230 (1566)
.++|++.+.||+|+||.||+|.+.... .....+..||+|.+.... ......++. +|+.+|.
T Consensus 4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~E~~~l~ 74 (304)
T cd05096 4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA-NKNARNDFL--------KEVKILS 74 (304)
T ss_pred hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC-CHHHHHHHH--------HHHHHHh
Confidence 357999999999999999988642100 011245579999987532 222223344 5999999
Q ss_pred cccCCCcccccccccccCceeeeccCCcc-chhhhhccCcc-----------------cccchhHHHHHHHHHHHHHHHH
Q 000399 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPN-----------------ALKSEWHVRFLMYQLLSAIAYL 292 (1566)
Q Consensus 231 ~l~HpNIV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~-----------------~~l~~~~~~~i~~Qil~aL~yL 292 (1566)
.++||||+++++++.+.+..++||||+++ +|.+++..... ..++...+..++.||+.||.||
T Consensus 75 ~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~l 154 (304)
T cd05096 75 RLKDPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYL 154 (304)
T ss_pred hcCCCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999986 99998863211 1245567788999999999999
Q ss_pred hhccccCCCccCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccc
Q 000399 293 HSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNR 372 (1566)
Q Consensus 293 H~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~ 372 (1566)
|++||+||||||+|||++.++ .+||+|||+++....... ........++..|+|||++.+..++...|+
T Consensus 155 H~~~ivH~dlkp~Nill~~~~--~~kl~DfG~~~~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv 223 (304)
T cd05096 155 SSLNFVHRDLATRNCLVGENL--TIKIADFGMSRNLYAGDY---------YRIQGRAVLPIRWMAWECILMGKFTTASDV 223 (304)
T ss_pred HHCCccccCcchhheEEcCCc--cEEECCCccceecccCce---------eEecCcCCCCccccCHHHHhcCCCCchhhh
Confidence 999999999999999999988 799999999985432100 001122345778999999988889999999
Q ss_pred cccccc
Q 000399 373 WWRGEL 378 (1566)
Q Consensus 373 Ws~G~i 378 (1566)
|+.|++
T Consensus 224 ~slG~~ 229 (304)
T cd05096 224 WAFGVT 229 (304)
T ss_pred HHHHHH
Confidence 999987
No 189
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.89 E-value=7.2e-25 Score=262.20 Aligned_cols=189 Identities=17% Similarity=0.195 Sum_probs=149.4
Q ss_pred eeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcc---cCCCccccccccc
Q 000399 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCL---RHPNVAPVLGLLK 245 (1566)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l---~HpNIV~l~~~~~ 245 (1566)
||+|+||+||+|+++ .++..+|+|++.+...... .....+ +|..++..+ +||||+++++++.
T Consensus 1 lG~G~~g~Vy~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~~p~i~~~~~~~~ 66 (330)
T cd05586 1 IGKGTFGQVYQVRKK------DTRRIYAMKVLSKKEIVAKKEVAHTI--------GERNILVRTLLDESPFIVGLKFSFQ 66 (330)
T ss_pred CCCCCceEEEEEEEC------CCCCEEEEEEEeHHHHhhhhHHHHHH--------HHHHHHHHhccCCCCcCcceEEEEe
Confidence 799999999998863 5688999999876432221 111222 355565554 6999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
+.+.+|+||||+++ +|.+++. ..+.+++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||+
T Consensus 67 ~~~~~~lv~e~~~~g~L~~~l~--~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~--~~kl~Dfg~ 142 (330)
T cd05586 67 TDSDLYLVTDYMSGGELFWHLQ--KEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATG--HIALCDFGL 142 (330)
T ss_pred cCCeEEEEEcCCCCChHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCC--CEEEecCCc
Confidence 99999999999986 9998887 345688999999999999999999999999999999999999998 799999999
Q ss_pred CCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhcccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
++....... ......||+.|+|||++.+. .++..+|+|+.|++ .+.+++|+.
T Consensus 143 a~~~~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvi-------l~elltG~~ 195 (330)
T cd05586 143 SKANLTDNK-----------TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVL-------VFEMCCGWS 195 (330)
T ss_pred CcCCCCCCC-----------CccCccCCccccCHHHHcCCCCCCCccceeccccE-------EEEeccCCC
Confidence 975331100 01123489999999988654 57889999999988 556666754
No 190
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.89 E-value=8.3e-25 Score=253.23 Aligned_cols=192 Identities=15% Similarity=0.176 Sum_probs=154.0
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|++.+.||+|+||.||+|..+. ....+..+|+|.++.... ......+. +|+.+|+.++||||++++
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~---~~~~~~~vaik~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~iv~~~ 72 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKL---PSKRELPVAIHTLRAGCS-DKQRRGFL--------AEALTLGQFDHSNIVRLE 72 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEec---CCCceeeEEEEecCCCCC-HHHHHHHH--------HHHHHHhcCCCCCcCeEE
Confidence 479999999999999999886432 123567899999875422 22223344 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++..++..++||||+++ +|.+++... ...+++..++.++.||+.||.|||++|++||||||+|||++.++ .+|++
T Consensus 73 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~--~~~l~ 149 (266)
T cd05064 73 GVITRGNTMMIVTEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDL--VCKIS 149 (266)
T ss_pred EEEecCCCcEEEEEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCC--cEEEC
Confidence 999999999999999997 999998743 34578889999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||.+......... . .....++..|+|||++.+..++...|+|+.|++
T Consensus 150 dfg~~~~~~~~~~~----~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 197 (266)
T cd05064 150 GFRRLQEDKSEAIY----T------TMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIV 197 (266)
T ss_pred CCcccccccccchh----c------ccCCCCceeecCHHHHhhCCccchhHHHHHHHH
Confidence 99987653210000 0 011124567999999988889999999999987
No 191
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.89 E-value=2e-24 Score=261.52 Aligned_cols=231 Identities=15% Similarity=0.201 Sum_probs=189.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
...+.+.||.|.||+|++|+.+. ++ +....||||.++.+ ...+...+|| .|+.||.+++||||++|.|
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~-pg--kre~~VAIKTLK~G-ytekqrrdFL--------~EAsIMGQFdHPNIIrLEG 697 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKL-PG--KREITVAIKTLKAG-YTEKQRRDFL--------SEASIMGQFDHPNIIRLEG 697 (996)
T ss_pred heEEEEEEecccccceecccccC-CC--CcceeEEEeeeccC-ccHHHHhhhh--------hhhhhcccCCCCcEEEEEE
Confidence 34678999999999999999753 22 56688999999876 3444556777 4999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
+......+.||.|||++ +|+.+|+.+. +.|+..++.-+++.|+.||+||-+.++|||||...|||++.+. .+|++|
T Consensus 698 VVTks~PvMIiTEyMENGsLDsFLR~~D-GqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnL--vCKVsD 774 (996)
T KOG0196|consen 698 VVTKSKPVMIITEYMENGSLDSFLRQND-GQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNL--VCKVSD 774 (996)
T ss_pred EEecCceeEEEhhhhhCCcHHHHHhhcC-CceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccce--EEEecc
Confidence 99999999999999996 9999999654 5588888889999999999999999999999999999999999 899999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccccCCccce
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFH 401 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~dl~q~ 401 (1566)
||++|........ ..+.. +-.-...|.|||.+....+++..|+|+.|.+ ++..-.+.-|+|+|++..
T Consensus 775 FGLSRvledd~~~--~ytt~------GGKIPiRWTAPEAIa~RKFTsASDVWSyGIV-----mWEVmSyGERPYWdmSNQ 841 (996)
T KOG0196|consen 775 FGLSRVLEDDPEA--AYTTL------GGKIPIRWTAPEAIAYRKFTSASDVWSYGIV-----MWEVMSYGERPYWDMSNQ 841 (996)
T ss_pred ccceeecccCCCc--ccccc------CCccceeecChhHhhhcccCchhhccccceE-----EEEecccCCCcccccchH
Confidence 9999966532210 00000 0011345899999999999999999999988 777778888999999999
Q ss_pred eecceeE-eeccCCCCCCCcc
Q 000399 402 MVMPWVI-DFSTKPDENFDSG 421 (1566)
Q Consensus 402 pv~pwv~-d~~~~~~~~~~~~ 421 (1566)
.|+--|. +|.-.++..+|..
T Consensus 842 dVIkaIe~gyRLPpPmDCP~a 862 (996)
T KOG0196|consen 842 DVIKAIEQGYRLPPPMDCPAA 862 (996)
T ss_pred HHHHHHHhccCCCCCCCCcHH
Confidence 9998777 6766655555544
No 192
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.89 E-value=9.5e-24 Score=248.13 Aligned_cols=212 Identities=16% Similarity=0.207 Sum_probs=182.8
Q ss_pred cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEeccc-ccc
Q 000399 1289 PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRI-NCV 1366 (1566)
Q Consensus 1289 fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg-~~i 1366 (1566)
|-+--+| +++||+|..|+|||..+. ++.+|.+|.+-|++++.||...++.|+|. |-+||+||.+.+ .|.
T Consensus 63 fiaRknW-----iv~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSD----Dm~iKlW~we~~wa~~ 133 (794)
T KOG0276|consen 63 FIARKNW-----IVTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSD----DMTIKLWDWENEWACE 133 (794)
T ss_pred eeeccce-----EEEecCCceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCC----ccEEEEeeccCceeee
Confidence 3344566 999999999999999987 89999999999999999999999999998 999999999754 899
Q ss_pred cccccccccccceEEeecCC-ceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccc
Q 000399 1367 SGYYGHEEVVNDICVLSSSG-RIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLS 1443 (1566)
Q Consensus 1367 ~tl~gH~~~V~sVafsp~g~-~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1443 (1566)
++|+||+..|.+|+|+|... .+||+ |+|||+|.+.+..+..++++| .
T Consensus 134 qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gH------------------------------e 183 (794)
T KOG0276|consen 134 QTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGH------------------------------E 183 (794)
T ss_pred eEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeecc------------------------------c
Confidence 99999999999999999765 67887 999999999888888888765 6
Q ss_pred cccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccc
Q 000399 1444 SGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVAS 1523 (1566)
Q Consensus 1444 ~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spd 1523 (1566)
.+|++|.|=+. +|-.+++||+.|.+|++||.++.+|+.++.|| +..|+.++|+|.-
T Consensus 184 kGVN~Vdyy~~--------gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGH------t~Nvs~v~fhp~l---------- 239 (794)
T KOG0276|consen 184 KGVNCVDYYTG--------GDKPYLISGADDLTIKVWDYQTKSCVQTLEGH------TNNVSFVFFHPEL---------- 239 (794)
T ss_pred cCcceEEeccC--------CCcceEEecCCCceEEEeecchHHHHHHhhcc------cccceEEEecCCC----------
Confidence 77889888775 35579999999999999999999999999987 5566778887654
Q ss_pred hhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeec
Q 000399 1524 PSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIIS 1564 (1566)
Q Consensus 1524 g~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafsp 1564 (1566)
.+|+|||+||++|||+..|-+...++.---..|.|++..+
T Consensus 240 -piiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k 279 (794)
T KOG0276|consen 240 -PIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHK 279 (794)
T ss_pred -cEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecC
Confidence 4899999999999999998887777665556667766544
No 193
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.89 E-value=2.6e-24 Score=266.95 Aligned_cols=219 Identities=16% Similarity=0.157 Sum_probs=173.8
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+.+..+.||+|+||+||+|+- +.....++...||||.++.. .+.+...+|. ||+++|..++|||||+|+|
T Consensus 487 ~i~~~~eLGegaFGkVf~a~~-~~l~p~~~~~lVAVK~LKd~-a~~~~~~dF~--------REaeLla~l~H~nIVrLlG 556 (774)
T KOG1026|consen 487 DIVFKEELGEGAFGKVFLAEA-YGLLPGQDEQLVAVKALKDK-AENQARQDFR--------REAELLAELQHPNIVRLLG 556 (774)
T ss_pred heeehhhhcCchhhhhhhhhc-cCCCCCccceehhHhhhccc-ccHHHHHHHH--------HHHHHHHhccCCCeEEEEE
Confidence 567789999999999999984 11122356788999999875 3344455666 6999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCc------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccc
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSP------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl 309 (1566)
++..++.+|||+|||.. +|.++|+-+. ..+++..+...|+.||+.||.||-++.+|||||..+|+||
T Consensus 557 VC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV 636 (774)
T KOG1026|consen 557 VCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV 636 (774)
T ss_pred EEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee
Confidence 99999999999999995 9999998421 1226777888999999999999999999999999999999
Q ss_pred cccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHh
Q 000399 310 TDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNK 389 (1566)
Q Consensus 310 ~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~ 389 (1566)
.++. .|||+|||++|..=..+++....... -...||+||-+...+|+...|+|+.|++ |+.+-.
T Consensus 637 ge~l--~VKIsDfGLsRdiYssDYYk~~~~t~---------lPIRWMppEsIly~kFTteSDVWs~GVv-----LWEIFs 700 (774)
T KOG1026|consen 637 GENL--VVKISDFGLSRDIYSSDYYKVRGNTL---------LPIRWMPPESILYGKFTTESDVWSFGVV-----LWEIFS 700 (774)
T ss_pred ccce--EEEecccccchhhhhhhhhcccCCce---------eeeecCCHHHhhcCcccchhhhhhhhhh-----hhhhhc
Confidence 9999 89999999999644333322221221 2345999999999999999999999998 666666
Q ss_pred hcccccCCccceeeccee
Q 000399 390 LAGRRWGDYTFHMVMPWV 407 (1566)
Q Consensus 390 ~agrs~~dl~q~pv~pwv 407 (1566)
++-.++..++...|+..|
T Consensus 701 yG~QPy~glSn~EVIe~i 718 (774)
T KOG1026|consen 701 YGKQPYYGLSNQEVIECI 718 (774)
T ss_pred cccCcccccchHHHHHHH
Confidence 666666666665555443
No 194
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.89 E-value=1.2e-24 Score=254.71 Aligned_cols=198 Identities=16% Similarity=0.128 Sum_probs=161.8
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.|+..+.||+|+||.||++.+. .+++.+|+|.+.+....... ...++ +|+.+|+.++|+||+.++
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~------~~~~~~avK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~i~~~~ 66 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVR------ATGKMYACKKLEKKRIKKRKGESMAL--------NEKQILEKVNSRFVVSLA 66 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEc------CCCceEEEEEEehhhccchHHHHHHH--------HHHHHHHhCCCCCeeeee
Confidence 3778899999999999988863 57889999998764332221 12233 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+.+.+.+|+||||+++ +|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++ .++|+
T Consensus 67 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~--~~~l~ 144 (285)
T cd05630 67 YAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHG--HIRIS 144 (285)
T ss_pred EEEecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCC--CEEEe
Confidence 999999999999999986 999988654444588889999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||++....... . .....|+..|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 145 Dfg~~~~~~~~~------~------~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~-------l~~l~~g~~P 200 (285)
T cd05630 145 DLGLAVHVPEGQ------T------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCL-------LYEMIAGQSP 200 (285)
T ss_pred eccceeecCCCc------c------ccCCCCCccccChHHHcCCCCCCccccHHHHHH-------HHHHHhCCCC
Confidence 999987533100 0 012248899999999998889999999999987 5666677764
No 195
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.89 E-value=2e-24 Score=263.22 Aligned_cols=203 Identities=17% Similarity=0.134 Sum_probs=156.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|+..- .....++..||||+++.... ......+. +|+.+|+.+ +||||++
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~-~~~~~~~~~vavK~l~~~~~-~~~~~~~~--------~Ei~il~~l~~HpnIv~ 103 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYG-LFKSDAAMTVAVKMLKPSAH-LTEREALM--------SELKVLSYLGNHINIVN 103 (375)
T ss_pred hHHeehhheecCCccceEEEEEEec-cccCccceeEEEEeccCCcC-cHHHHHHH--------HHHHHHHHhcCCcceee
Confidence 3479999999999999999876310 11124567899999864322 12222333 699999999 8999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcc------------------------------------------------
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPN------------------------------------------------ 270 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~------------------------------------------------ 270 (1566)
+++++.+.+..++||||+++ +|.++++....
T Consensus 104 l~~~~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 183 (375)
T cd05104 104 LLGACTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKA 183 (375)
T ss_pred eeeeeccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccc
Confidence 99999999999999999996 99988863211
Q ss_pred -------------------------cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 271 -------------------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 271 -------------------------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
..++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||++
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~--~~kl~DfG~a 261 (375)
T cd05104 184 DKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGR--ITKICDFGLA 261 (375)
T ss_pred ccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCC--cEEEecCccc
Confidence 1356667788999999999999999999999999999999887 7999999999
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a 391 (1566)
+......... ......++..|+|||++.+..++...|+|+.|++ .+..++
T Consensus 262 ~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~-------l~ellt 311 (375)
T cd05104 262 RDIRNDSNYV---------VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIL-------LWEIFS 311 (375)
T ss_pred eeccCccccc---------ccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHH-------HHHHHh
Confidence 8644211100 0112235667999999998899999999999987 555555
No 196
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.89 E-value=2.9e-23 Score=231.15 Aligned_cols=186 Identities=22% Similarity=0.364 Sum_probs=168.0
Q ss_pred eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEE
Q 000399 1319 ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLH 1396 (1566)
Q Consensus 1319 ~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIk 1396 (1566)
..+.+.||.+.|+||++.|-+..|+|||. |+||+|||+++|+...++.||...|..|++++...++.|+ |+.|+
T Consensus 143 l~rVi~gHlgWVr~vavdP~n~wf~tgs~----DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VK 218 (460)
T KOG0285|consen 143 LYRVISGHLGWVRSVAVDPGNEWFATGSA----DRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVK 218 (460)
T ss_pred ehhhhhhccceEEEEeeCCCceeEEecCC----CceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeE
Confidence 45788999999999999999999999998 9999999999999999999999999999999999999877 99999
Q ss_pred EeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCce
Q 000399 1397 VWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGS 1476 (1566)
Q Consensus 1397 LWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~Dgt 1476 (1566)
.||++.++.++.+-+| -++|.+++.+|. -+.+++|+.|.+
T Consensus 219 CwDLe~nkvIR~YhGH------------------------------lS~V~~L~lhPT----------ldvl~t~grDst 258 (460)
T KOG0285|consen 219 CWDLEYNKVIRHYHGH------------------------------LSGVYCLDLHPT----------LDVLVTGGRDST 258 (460)
T ss_pred EEechhhhhHHHhccc------------------------------cceeEEEecccc----------ceeEEecCCcce
Confidence 9999999999877654 567888888887 679999999999
Q ss_pred EEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCce
Q 000399 1477 LRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY 1556 (1566)
Q Consensus 1477 IrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~ 1556 (1566)
+|+||+|+...++++.|| ...|.+|.+.+.+ ..++|||.|++|++||++.|+-..++..|...
T Consensus 259 ~RvWDiRtr~~V~~l~GH------~~~V~~V~~~~~d-----------pqvit~S~D~tvrlWDl~agkt~~tlt~hkks 321 (460)
T KOG0285|consen 259 IRVWDIRTRASVHVLSGH------TNPVASVMCQPTD-----------PQVITGSHDSTVRLWDLRAGKTMITLTHHKKS 321 (460)
T ss_pred EEEeeecccceEEEecCC------CCcceeEEeecCC-----------CceEEecCCceEEEeeeccCceeEeeecccce
Confidence 999999999999999988 4456666665433 36899999999999999999999999999999
Q ss_pred eeEeeeecc
Q 000399 1557 VTKVRIISK 1565 (1566)
Q Consensus 1557 V~~Vafspd 1565 (1566)
|++++.+|+
T Consensus 322 vral~lhP~ 330 (460)
T KOG0285|consen 322 VRALCLHPK 330 (460)
T ss_pred eeEEecCCc
Confidence 999999985
No 197
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.89 E-value=1.3e-24 Score=255.72 Aligned_cols=195 Identities=15% Similarity=0.222 Sum_probs=163.1
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc---CC
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR---HP 235 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~---Hp 235 (1566)
....+|..++.+|+|+||.|++|.++ ++...|+||.+.+++.-.....+-.+ +| +.-.||+||..++ |+
T Consensus 558 ~k~s~yttlq~lG~GAyGkV~lai~K------~n~~eVViK~I~KeRIL~DtWvrDrk-LG-tVp~EIqIla~l~~~sH~ 629 (772)
T KOG1152|consen 558 KKFSDYTTLQPLGEGAYGKVNLAIHK------ENNYEVVIKMIFKERILVDTWVRDRK-LG-TVPSEIQILATLNKHSHE 629 (772)
T ss_pred cccccceeeeeccccccceEEEeeec------ccceEEEeeehhhhhhhhhhhhcccc-cC-ccchhHHHHHHhhhcCcc
Confidence 34557999999999999999999985 56888999999988654433322221 22 2346999999997 99
Q ss_pred CcccccccccccCceeeeccCCc-c-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc
Q 000399 236 NVAPVLGLLKTSGLITSVIPKTP-Y-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 236 NIV~l~~~~~~~~~l~LV~E~~~-g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~ 313 (1566)
||++++++|++++++||+||--. | +|+++|.+.+ .++|.+++.|++||+.|+++||++||||||||-+|+.++.+|
T Consensus 630 NIlKlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g 707 (772)
T KOG1152|consen 630 NILKLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNG 707 (772)
T ss_pred chhhhhheeecCCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhccccccccCceecccccccEEEecCC
Confidence 99999999999999999999765 5 9999998644 489999999999999999999999999999999999999999
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhh-cccccccccc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHS-QFNRWWRGEL 378 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~-~~d~Ws~G~i 378 (1566)
-+||+|||.|.+.+.. + ...++||..|.|||++.+..|.. .-|+|..|.+
T Consensus 708 --~~klidfgsaa~~ksg--------p-----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgil 758 (772)
T KOG1152|consen 708 --FVKLIDFGSAAYTKSG--------P-----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGIL 758 (772)
T ss_pred --eEEEeeccchhhhcCC--------C-----cceeeeeccccchhhhCCCccCCCcchhhhhhhe
Confidence 6999999999875521 1 12346999999999999999865 6689999976
No 198
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.89 E-value=1.3e-24 Score=253.45 Aligned_cols=192 Identities=15% Similarity=0.084 Sum_probs=155.3
Q ss_pred eeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccccCc
Q 000399 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 249 (1566)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~~ 249 (1566)
||+|+||.||+++++ .++..+|+|.+.+............ ..|+++|+.++||||+++++++.++..
T Consensus 1 lg~G~~g~Vy~~~~~------~~~~~~a~K~~~~~~~~~~~~~~~~-------~~E~~il~~l~hp~i~~~~~~~~~~~~ 67 (277)
T cd05607 1 LGKGGFGEVCAVQVK------NTGKMYACKKLDKKRLKKKSGEKMA-------LLEKEILEKVNSPFIVNLAYAFESKTH 67 (277)
T ss_pred CCCCCceEEEEEEEc------cCCcEEEEEEEcHHHhhcchhhHHH-------HHHHHHHHhcCCCcEEEEEEEEecCCe
Confidence 799999999988753 4688999999875433222111111 258999999999999999999999999
Q ss_pred eeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCcc
Q 000399 250 ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFN 328 (1566)
Q Consensus 250 l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~ 328 (1566)
+|+||||+++ +|.+++.......++...+..++.||+.||.|||++||+||||||+||+++.++ .+||+|||++...
T Consensus 68 ~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~--~~~l~Dfg~~~~~ 145 (277)
T cd05607 68 LCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQG--NCRLSDLGLAVEL 145 (277)
T ss_pred EEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCC--CEEEeeceeeeec
Confidence 9999999987 998888654444577888889999999999999999999999999999999988 7999999998754
Q ss_pred ccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 329 SIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
..... .....|+..|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 146 ~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~-------l~el~~g~~p 193 (277)
T cd05607 146 KDGKT------------ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCS-------IYEMVAGRTP 193 (277)
T ss_pred CCCce------------eeccCCCCCccCHHHHccCCCCCchhHHHHHHH-------HHHHHhCCCC
Confidence 32100 112247889999999988889999999999987 6777778754
No 199
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.88 E-value=1.4e-24 Score=260.18 Aligned_cols=195 Identities=16% Similarity=0.192 Sum_probs=160.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||++.+. .++..+|+|.+.... ......++. +|+++|+.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~ 68 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHK------PSGLIMARKLIHLEI-KPAIRNQII--------RELQVLHECNSPYIVGF 68 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEEC------CCCcEEEEEEeeccc-CHHHHHHHH--------HHHHHHHHCCCCcccce
Confidence 358999999999999999998863 467889999876532 112222333 69999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhc-cccCCCccCCCccccccchhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~-gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++|.+++.+|+||||+++ +|.+++.. .+.+++..++.++.|++.||.|||++ +|+||||||+|||++.++ .+|
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~--~~k 144 (333)
T cd06650 69 YGAFYSDGEISICMEHMDGGSLDQVLKK--AGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG--EIK 144 (333)
T ss_pred eEEEEECCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCC--CEE
Confidence 9999999999999999986 99999973 34578888899999999999999985 799999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|+|||+++..... ......|+..|+|||++.+..++...|+|+.|++ .+..+.|+.
T Consensus 145 L~Dfg~~~~~~~~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~i-------l~~l~~g~~ 200 (333)
T cd06650 145 LCDFGVSGQLIDS-------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS-------LVEMAIGRY 200 (333)
T ss_pred EeeCCcchhhhhh-------------ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHH-------HHHHHHCCC
Confidence 9999998754310 0112347889999999998888999999999987 666677764
No 200
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.88 E-value=2.3e-24 Score=276.28 Aligned_cols=217 Identities=18% Similarity=0.169 Sum_probs=178.3
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+.++.+.||+|+||+||+|.-.-.++... ...||||.+.+. .+.+...+|++ |..+|++++|||||+++|
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~-~~~vaiK~l~~~-~~~~~~~~Fl~--------Ea~~m~~f~HpNiv~liG 762 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVS-PIQVAVKSLKRL-SSEQEVSDFLK--------EALLMSKFDHPNIVSLIG 762 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCcc-ceEEEEEecccc-CCHHHHHHHHH--------HHHHHhcCCCcceeeEEE
Confidence 56788999999999999987543233322 556899998765 45566777885 999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCc-----ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSP-----NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~-----~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
++.+....+|++|||.| +|..+|+..+ ...++..+...++.||++|++||+++++|||||..+|+||+... .
T Consensus 763 v~l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r--~ 840 (1025)
T KOG1095|consen 763 VCLDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERR--V 840 (1025)
T ss_pred eecCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccC--c
Confidence 99999999999999997 9999999642 23477888999999999999999999999999999999999998 8
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccccC
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWG 396 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~ 396 (1566)
+||+|||+||..-..+.+......+ -..-|||||.+....++.++|+|+.|++ |+.+-.++..+|.
T Consensus 841 VKIaDFGlArDiy~~~yyr~~~~a~---------lPvkWm~PEsl~d~iFtskSDvWsFGVl-----lWEifslG~~PY~ 906 (1025)
T KOG1095|consen 841 VKIADFGLARDIYDKDYYRKHGEAM---------LPVKWMPPESLKDGIFTSKSDVWSFGVL-----LWEIFSLGATPYP 906 (1025)
T ss_pred EEEcccchhHhhhhchheeccCccc---------cceecCCHHHHhhcccccccchhhhHHH-----HHHHHhCCCCCCC
Confidence 9999999999544322222111111 2345999999999999999999999998 8888888888888
Q ss_pred Cccceeecc
Q 000399 397 DYTFHMVMP 405 (1566)
Q Consensus 397 dl~q~pv~p 405 (1566)
+.++..|+-
T Consensus 907 ~~~n~~v~~ 915 (1025)
T KOG1095|consen 907 SRSNFEVLL 915 (1025)
T ss_pred CcchHHHHH
Confidence 888877775
No 201
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.88 E-value=5.3e-25 Score=255.16 Aligned_cols=199 Identities=18% Similarity=0.216 Sum_probs=172.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+++++..||-|+||.|-+++.+ .....+|+|++++..+......+.+. .|-+||..++.|.||+|
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~------~~~~~fAlKilkK~hIVdtkQqeHv~-------sEr~Im~~~~s~fIvrL 485 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVN------SQKATFALKILKKKHIVDTKQQEHVF-------SERNIMMECRSDFIVRL 485 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEec------ccchHHHHHHHhHhhccchhHHHHHH-------hHHHHHHhcCchHHHHH
Confidence 457889999999999999987642 23446999999988776665555553 79999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
|-.|.++.++||.||-|-| .|..+|+ .++.|.+..+++|+..++.|++|||++|||+|||||+|++++.+| .+||
T Consensus 486 YrTfrd~kyvYmLmEaClGGElWTiLr--dRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~G--y~KL 561 (732)
T KOG0614|consen 486 YRTFRDSKYVYMLMEACLGGELWTILR--DRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRG--YLKL 561 (732)
T ss_pred HHHhccchhhhhhHHhhcCchhhhhhh--hcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCC--ceEE
Confidence 9999999999999999876 9999998 567799999999999999999999999999999999999999999 5999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
.|||+|+......+ + -+++|||.|.|||++..+..+..+|.|+.|.+ .++.+.|+++
T Consensus 562 VDFGFAKki~~g~K-----T-------wTFcGTpEYVAPEIILnKGHD~avDyWaLGIl-------i~ELL~G~pP 618 (732)
T KOG0614|consen 562 VDFGFAKKIGSGRK-----T-------WTFCGTPEYVAPEIILNKGHDRAVDYWALGIL-------IYELLTGSPP 618 (732)
T ss_pred eehhhHHHhccCCc-----e-------eeecCCcccccchhhhccCcchhhHHHHHHHH-------HHHHHcCCCC
Confidence 99999997663211 1 13469999999999999999999999999965 7888888874
No 202
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.88 E-value=2.1e-24 Score=252.72 Aligned_cols=198 Identities=16% Similarity=0.112 Sum_probs=161.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccc-cchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~-~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.|+..+.||+|+||+||+|.+. .+++.+|+|.+.+........ ..+. +|+++|+.++|+||++++
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~E~~il~~l~~~~i~~~~ 66 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVR------ATGKMYACKRLEKKRIKKRKGESMAL--------NEKQILEKVNSQFVVNLA 66 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEC------CCCcEEEEEEeehhhhhhhhHHHHHH--------HHHHHHHHcCCcCceeEE
Confidence 3778899999999999988763 568899999987653332221 2223 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+..++..|+||||+++ +|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~--~~kl~ 144 (285)
T cd05632 67 YAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYG--HIRIS 144 (285)
T ss_pred EEEecCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCC--CEEEe
Confidence 999999999999999997 898888644444688999999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++...... . .....|+..|+|||++.+..++...|.|+.|++ .+..+.|+.+
T Consensus 145 Dfg~~~~~~~~~------~------~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~-------l~~l~~g~~P 200 (285)
T cd05632 145 DLGLAVKIPEGE------S------IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCL-------IYEMIEGQSP 200 (285)
T ss_pred cCCcceecCCCC------c------ccCCCCCcCccChHHhcCCCCCcccchHHHHHH-------HHHHHhCCCC
Confidence 999987533100 0 112348899999999988889999999999987 5556667654
No 203
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.88 E-value=1.4e-23 Score=260.95 Aligned_cols=189 Identities=17% Similarity=0.062 Sum_probs=124.7
Q ss_pred hhcccccceeeeecchhhHHHHHhhhc----------cCCcchhhccccceeeecccccccccchhhhc------CCCCC
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFL----------SGCLEDCVLGSLNLLIEGKASGQESKNFLRLI------GVPSF 223 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~----------~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~------g~~~~ 223 (1566)
..++|++.++||+|+||+||+|...-. ......++.||||.+..... ....+|+++. ....+
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~--~~~~~fl~e~~~~~~~~e~~~ 220 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQ--GVRQDFLKTGTLAKGSAETGM 220 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccch--hhHHHHHhhhhhhhcccchhH
Confidence 356899999999999999998753100 01123457799999864321 1112222100 00112
Q ss_pred CCCCCCCcccCCC-----cccccccccc--------cCceeeeccCCcc-chhhhhccCcc-------------------
Q 000399 224 DESSVPGCLRHPN-----VAPVLGLLKT--------SGLITSVIPKTPY-TLENILQFSPN------------------- 270 (1566)
Q Consensus 224 rEi~iL~~l~HpN-----IV~l~~~~~~--------~~~l~LV~E~~~g-sL~~~l~~~~~------------------- 270 (1566)
.|+.++.+++|.| +++++++|.. .+..+|||||+++ +|.++++....
T Consensus 221 vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~ 300 (507)
T PLN03224 221 VEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDN 300 (507)
T ss_pred HHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhh
Confidence 3555566665554 4677777653 3568999999997 99998863211
Q ss_pred ---cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeec
Q 000399 271 ---ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIE 347 (1566)
Q Consensus 271 ---~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~ 347 (1566)
..++...++.++.|++.||.|||+++|+||||||+|||++.++ .+||+|||+++....... ....
T Consensus 301 ~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~--~~kL~DFGla~~~~~~~~----~~~~------ 368 (507)
T PLN03224 301 MPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDG--QVKIIDFGAAVDMCTGIN----FNPL------ 368 (507)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCC--cEEEEeCcCccccccCCc----cCcc------
Confidence 0123445778999999999999999999999999999999988 799999999975432100 0000
Q ss_pred CCccccccccccccc
Q 000399 348 GCSSQGLYADLKLSQ 362 (1566)
Q Consensus 348 ~~~gt~~Y~APE~l~ 362 (1566)
...+++.|+|||++.
T Consensus 369 ~g~~tp~Y~aPE~l~ 383 (507)
T PLN03224 369 YGMLDPRYSPPEELV 383 (507)
T ss_pred ccCCCcceeChhhhc
Confidence 012467788888763
No 204
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.88 E-value=2.9e-24 Score=271.11 Aligned_cols=203 Identities=15% Similarity=0.113 Sum_probs=150.2
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccc--------------eeeecccccccccchhhhcCCCCCCC
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLN--------------LLIEGKASGQESKNFLRLIGVPSFDE 225 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK--------------~l~~~~~~~~~~~~~l~~~g~~~~rE 225 (1566)
..++|++++.||+|+||+||+|..+. ..+...++| .+.+...........+ .+|
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~-------~~E 213 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRA-----STEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQL-------ENE 213 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEec-----cchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHH-------HHH
Confidence 35689999999999999999765321 111111111 1111101111111112 269
Q ss_pred CCCCCcccCCCcccccccccccCceeeeccCCccchhhhhccCc---ccccchhHHHHHHHHHHHHHHHHhhccccCCCc
Q 000399 226 SSVPGCLRHPNVAPVLGLLKTSGLITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV 302 (1566)
Q Consensus 226 i~iL~~l~HpNIV~l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~---~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDL 302 (1566)
+.+|+.++|||||++++++...+..|+|+|++.++|.+++.... ......+.++.++.||+.||.|||++|||||||
T Consensus 214 i~il~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDL 293 (501)
T PHA03210 214 ILALGRLNHENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDI 293 (501)
T ss_pred HHHHHhCCCCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCC
Confidence 99999999999999999999999999999999988888775321 122345677889999999999999999999999
Q ss_pred cCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCch
Q 000399 303 CPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 382 (1566)
Q Consensus 303 Kp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfe 382 (1566)
||+|||++.++ .+||+|||+++....... ....+..||..|+|||++.+..|+..+|+|+.|++
T Consensus 294 KP~NILl~~~~--~vkL~DFGla~~~~~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi---- 357 (501)
T PHA03210 294 KLENIFLNCDG--KIVLGDFGTAMPFEKERE----------AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLI---- 357 (501)
T ss_pred CHHHEEECCCC--CEEEEeCCCceecCcccc----------cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHH----
Confidence 99999999998 799999999986442110 01123458999999999999999999999999988
Q ss_pred hhhHHHhhccc
Q 000399 383 YLLFLNKLAGR 393 (1566)
Q Consensus 383 yL~~ln~~agr 393 (1566)
++..+.|.
T Consensus 358 ---l~ell~~~ 365 (501)
T PHA03210 358 ---LLDMLSHD 365 (501)
T ss_pred ---HHHHHHCC
Confidence 56666553
No 205
>PTZ00284 protein kinase; Provisional
Probab=99.88 E-value=3.6e-24 Score=268.53 Aligned_cols=195 Identities=15% Similarity=0.183 Sum_probs=152.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCc------ccC
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGC------LRH 234 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~------l~H 234 (1566)
.++|++++.||+|+||+||+|.+. ..+..||||++........ +.. +|+.+++. ..|
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~------~~~~~vAvK~i~~~~~~~~---~~~--------~e~~~l~~l~~~~~~~~ 190 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDR------KRKEYCAVKIVRNVPKYTR---DAK--------IEIQFMEKVRQADPADR 190 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEc------CCCeEEEEEEEecchhhHH---HHH--------HHHHHHHHHhhcCcccC
Confidence 358999999999999999998863 4678899999864211111 111 24444433 446
Q ss_pred CCccccccccccc-CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCcccccc
Q 000399 235 PNVAPVLGLLKTS-GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 235 pNIV~l~~~~~~~-~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~ 312 (1566)
++|++++++|... ..+|+|||+++++|.+++.. .+.+++..++.++.||+.||.|||+ .|||||||||+|||++.+
T Consensus 191 ~~i~~i~~~~~~~~~~~~iv~~~~g~~l~~~l~~--~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~ 268 (467)
T PTZ00284 191 FPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIMK--HGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETS 268 (467)
T ss_pred cceeeeEEEEEcCCceEEEEEeccCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecC
Confidence 6799999988764 57899999998899998873 4568899999999999999999998 599999999999999876
Q ss_pred ch--------------hhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 313 CW--------------SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 313 ~~--------------~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
+. ..+||+|||.+..... . .....||+.|+|||++.+..|+..+|+|+.|++
T Consensus 269 ~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~--------~------~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvi 334 (467)
T PTZ00284 269 DTVVDPVTNRALPPDPCRVRICDLGGCCDERH--------S------RTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCI 334 (467)
T ss_pred CcccccccccccCCCCceEEECCCCccccCcc--------c------cccccCCccccCcHHhhcCCCCcHHHHHHHHHH
Confidence 52 1489999998864221 0 112358999999999999999999999999988
Q ss_pred CCchhhhHHHhhccccc
Q 000399 379 SNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 379 snfeyL~~ln~~agrs~ 395 (1566)
++..+.|+.+
T Consensus 335 -------l~elltG~~p 344 (467)
T PTZ00284 335 -------IYELYTGKLL 344 (467)
T ss_pred -------HHHHHhCCCC
Confidence 7778888764
No 206
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.88 E-value=2.2e-24 Score=267.97 Aligned_cols=184 Identities=20% Similarity=0.102 Sum_probs=153.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
...|.+.+.||+|+||.||+|.+. ..+..||||..... .+. +|+++|++++|||||++
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~------~~~~~vavK~~~~~--------~~~--------~E~~iL~~L~HpnIv~l 225 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHP------DYPQRVVVKAGWYA--------SSV--------HEARLLRRLSHPAVLAL 225 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEEC------CCCCEEEEeccccc--------CHH--------HHHHHHHHCCCCCCCcE
Confidence 347999999999999999999863 45788999963221 122 59999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++++...+..++|||++.++|.+++... ...++...++.++.||+.||.|||++||+||||||+||||+.++ .+||+
T Consensus 226 ~~~~~~~~~~~lv~e~~~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~--~vkL~ 302 (461)
T PHA03211 226 LDVRVVGGLTCLVLPKYRSDLYTYLGAR-LRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPE--DICLG 302 (461)
T ss_pred EEEEEECCEEEEEEEccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCC--CEEEc
Confidence 9999999999999999999999988642 23578899999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||+++........ .......||..|+|||++.+..++..+|+|+.|++
T Consensus 303 DFGla~~~~~~~~~---------~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGvi 351 (461)
T PHA03211 303 DFGAACFARGSWST---------PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLV 351 (461)
T ss_pred ccCCceeccccccc---------ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHH
Confidence 99999864421000 01123458999999999999899999999999987
No 207
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.88 E-value=2.4e-24 Score=272.12 Aligned_cols=203 Identities=17% Similarity=0.171 Sum_probs=153.7
Q ss_pred hhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCc
Q 000399 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 237 (1566)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNI 237 (1566)
++-..+|+.++.||+||||.||++++++ +|+.||||+|.-.. ......+.+ ||+.+|.+|+||||
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKl------DGr~YAIKKIpl~~-s~~~~skI~--------rEVk~LArLnHpNV 539 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKL------DGREYAIKKIPLKA-SDKLYSKIL--------REVKLLARLNHPNV 539 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecc------cchhhhhhhccCch-HHHHHHHHH--------HHHHHHhhcCCcce
Confidence 4456789999999999999999999874 89999999998653 333333333 69999999999999
Q ss_pred ccccccccc-------------------------------------------------------c---------------
Q 000399 238 APVLGLLKT-------------------------------------------------------S--------------- 247 (1566)
Q Consensus 238 V~l~~~~~~-------------------------------------------------------~--------------- 247 (1566)
|++|..+.+ .
T Consensus 540 VRYysAWVEs~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e 619 (1351)
T KOG1035|consen 540 VRYYSAWVESTAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEE 619 (1351)
T ss_pred eeeehhhhccCCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcc
Confidence 997654320 0
Q ss_pred -------------------------------------------------CceeeeccCCcc-chhhhhccCcccccchhH
Q 000399 248 -------------------------------------------------GLITSVIPKTPY-TLENILQFSPNALKSEWH 277 (1566)
Q Consensus 248 -------------------------------------------------~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~ 277 (1566)
..+||-||||+. +|.++++++.... ....
T Consensus 620 ~~d~dedg~~~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~-~~d~ 698 (1351)
T KOG1035|consen 620 NDDSDEDGRNLSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS-QRDE 698 (1351)
T ss_pred cccccccccccccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch-hhHH
Confidence 136888999998 6667776322111 3556
Q ss_pred HHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCcccc---ccccC---CCCCCceee-eecCCc
Q 000399 278 VRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSI---ADWCT---IPTSPMIGC-CIEGCS 350 (1566)
Q Consensus 278 ~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~~~---~~~~~---~~~~~~~~~-~~~~~~ 350 (1566)
++.+++||+.||.|+|++|||||||||.||++++++ .|||.|||+|+.... ..... ......... ..++.+
T Consensus 699 ~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd~~~--~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~V 776 (1351)
T KOG1035|consen 699 AWRLFREILEGLAYIHDQGIIHRDLKPRNIFLDSRN--SVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQV 776 (1351)
T ss_pred HHHHHHHHHHHHHHHHhCceeeccCCcceeEEcCCC--CeeecccccchhhhhhhhhHhhccCccccccCCCCccccccc
Confidence 788999999999999999999999999999999988 799999999997221 00000 000000011 345678
Q ss_pred ccccccccccccccc---hhhcccccccccc
Q 000399 351 SQGLYADLKLSQSMD---WHSQFNRWWRGEL 378 (1566)
Q Consensus 351 gt~~Y~APE~l~~~~---y~~~~d~Ws~G~i 378 (1566)
||..|+|||++.+.. |+.++|+++.|.|
T Consensus 777 GTalYvAPEll~~~~~~~Yn~KiDmYSLGIV 807 (1351)
T KOG1035|consen 777 GTALYVAPELLSDTSSNKYNSKIDMYSLGIV 807 (1351)
T ss_pred ceeeeecHHHhcccccccccchhhhHHHHHH
Confidence 999999999997655 9999999999988
No 208
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.88 E-value=2.8e-24 Score=246.50 Aligned_cols=199 Identities=13% Similarity=0.109 Sum_probs=161.9
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||++.+. .++..+|+|.+...... ...+.+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~------~~~~~~~iK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 65 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHV------NSDQKYAMKEIRLPKSS-SAVEDSR--------KEAVLLAKMKHPNIVAFKE 65 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEc------CCCceEEEEEEEcCcch-HHHHHHH--------HHHHHHHhCCCCCcceEEE
Confidence 5889999999999999998863 46788999998653221 2222333 5888999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+.+++.+|+||||+++ +|.+++.......+++..++.++.|++.||.|||++||+|+||||+||+++.++ .++|+|
T Consensus 66 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~--~~~l~d 143 (255)
T cd08219 66 SFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNG--KVKLGD 143 (255)
T ss_pred EEEECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCC--cEEEcc
Confidence 99999999999999986 999988754455678888999999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccccC
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWG 396 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~ 396 (1566)
||+++....... ......+++.|+|||++.+..++...|+|+.|++ .+.++.|+.+.
T Consensus 144 fg~~~~~~~~~~-----------~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i-------~~~l~~g~~p~ 200 (255)
T cd08219 144 FGSARLLTSPGA-----------YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCI-------LYELCTLKHPF 200 (255)
T ss_pred cCcceeeccccc-----------ccccccCCccccCHHHHccCCcCchhhhhhhchh-------heehhhccCCC
Confidence 999875432100 1123457888999999988889999999999987 55556676543
No 209
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.88 E-value=4.2e-24 Score=277.08 Aligned_cols=202 Identities=17% Similarity=0.165 Sum_probs=160.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||.||+|++. .++..+|+|.+............++ +|+.+|+.++|||||++
T Consensus 12 l~~YeIl~kLG~GgFGtVYLAkdk------~tg~~vAlKvIk~~~l~e~~~~~~~--------~EI~IL~~L~HPNIVrl 77 (1021)
T PTZ00266 12 LNEYEVIKKIGNGRFGEVFLVKHK------RTQEFFCWKAISYRGLKEREKSQLV--------IEVNVMRELKHKNIVRY 77 (1021)
T ss_pred cCCEEEEEEEecCCCeEEEEEEEC------CCCeEEEEEEEeccccCHHHHHHHH--------HHHHHHHHcCCCCcCeE
Confidence 568999999999999999999863 4678899999876543333333344 59999999999999999
Q ss_pred cccccc--cCceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhc-------cccCCCccCCCcc
Q 000399 241 LGLLKT--SGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSL-------GIAHRSVCPSNVL 308 (1566)
Q Consensus 241 ~~~~~~--~~~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~-------gIiHrDLKp~NIL 308 (1566)
+++|.. ...+||||||+++ +|.++|... ....+++..++.|+.||+.||.|||+. +||||||||+|||
T Consensus 78 ~d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNIL 157 (1021)
T PTZ00266 78 IDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIF 157 (1021)
T ss_pred EEEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeE
Confidence 999854 4579999999996 999998742 224588999999999999999999984 4999999999999
Q ss_pred ccccc---------------hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc--cchhhccc
Q 000399 309 LTDSC---------------WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS--MDWHSQFN 371 (1566)
Q Consensus 309 l~~~~---------------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~--~~y~~~~d 371 (1566)
|+.+. ...+||+|||+++...... ....+.||+.|+|||++.+ ..++..+|
T Consensus 158 L~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s------------~~~s~vGTp~YmAPEvL~ge~~~~s~KSD 225 (1021)
T PTZ00266 158 LSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES------------MAHSCVGTPYYWSPELLLHETKSYDDKSD 225 (1021)
T ss_pred eecCccccccccccccccCCCCceEEccCCccccccccc------------cccccCCCccccCHHHHhccCCCCCchhH
Confidence 97531 1248999999998543110 1123568999999999854 45788999
Q ss_pred cccccccCCchhhhHHHhhccccc
Q 000399 372 RWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 372 ~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|+.|+| ++.++.|+.+
T Consensus 226 VWSLG~I-------LYELLTGk~P 242 (1021)
T PTZ00266 226 MWALGCI-------IYELCSGKTP 242 (1021)
T ss_pred HHHHHHH-------HHHHHHCCCC
Confidence 9999988 6777778754
No 210
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.88 E-value=5.7e-24 Score=260.94 Aligned_cols=197 Identities=18% Similarity=0.148 Sum_probs=152.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~ 239 (1566)
.++|++++.||+|+||.||+|++.- .+....+..||||++..... ......++ +|+++|+++. |||||+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~-~~~~~~~~~vavK~l~~~~~-~~~~~~~~--------~Ei~~l~~l~~HpnIv~ 105 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYG-LSRSQPVMKVAVKMLKPTAR-SSEKQALM--------SELKIMTHLGPHLNIVN 105 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcc-cCCCCCceEEEEEecCCCCC-hHHHHHHH--------HHHHHHHhcCCCCCeee
Confidence 4579999999999999999887421 11123456799999865322 12223344 5999999996 999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCc-------------------------------------------------
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSP------------------------------------------------- 269 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~------------------------------------------------- 269 (1566)
+++++.+.+.+|||||||++ +|.++|....
T Consensus 106 l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (400)
T cd05105 106 LLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADT 185 (400)
T ss_pred EEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccc
Confidence 99999999999999999996 9998875321
Q ss_pred ---------------------------------------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccC
Q 000399 270 ---------------------------------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 304 (1566)
Q Consensus 270 ---------------------------------------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp 304 (1566)
...++...+..++.||+.||.|||+++|+||||||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp 265 (400)
T cd05105 186 TQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAA 265 (400)
T ss_pred cccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCh
Confidence 11356667788999999999999999999999999
Q ss_pred CCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 305 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 305 ~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
+|||++.++ .+||+|||+++......... ......++..|+|||++.+..++.+.|+|+.|++
T Consensus 266 ~Nill~~~~--~~kL~DfGla~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvi 328 (400)
T cd05105 266 RNVLLAQGK--IVKICDFGLARDIMHDSNYV---------SKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGIL 328 (400)
T ss_pred HhEEEeCCC--EEEEEeCCcceecccccccc---------ccCCcCCCcceEChhhhcCCCCCchhhHHHHHHH
Confidence 999999988 79999999998543211100 0112235677999999988889999999999987
No 211
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.88 E-value=6e-24 Score=247.84 Aligned_cols=197 Identities=19% Similarity=0.220 Sum_probs=158.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|++. .++..+|+|.+............+ .+|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~------~~g~~~~~k~~~~~~~~~~~~~~~--------~~ei~~l~~l~h~~i~~~~~ 66 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNR------ETHEIVALKRVRLDDDDEGVPSSA--------LREICLLKELKHKNIVRLYD 66 (284)
T ss_pred CceeEEEecccCCeEEEEEEEC------CCCcEEEEEEeecccccccCccch--------hHHHHHHHhcCCCCeeeHHH
Confidence 5889999999999999998863 568889999987543222211222 36999999999999999999
Q ss_pred cccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
++.+...+|+|+||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+||
T Consensus 67 ~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~--~~~l~df 143 (284)
T cd07839 67 VLHSDKKLTLVFEYCDQDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNG--ELKLADF 143 (284)
T ss_pred HhccCCceEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCC--cEEECcc
Confidence 99999999999999999998887632 34578999999999999999999999999999999999999988 7999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhcccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|+++....... ......++..|+|||++.+. .++...|+|+.|++ .+.++.|+.
T Consensus 144 g~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i-------l~~l~tg~~ 198 (284)
T cd07839 144 GLARAFGIPVR-----------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCI-------FAELANAGR 198 (284)
T ss_pred chhhccCCCCC-----------CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHH-------HHHHHhcCC
Confidence 99985431100 01112367889999987654 46889999999987 666666653
No 212
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.88 E-value=3.4e-24 Score=246.57 Aligned_cols=204 Identities=14% Similarity=0.089 Sum_probs=162.0
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||+|.+. .++..+|+|.+...........+.. ...+|+.++++++||||++++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~------~~~~~~~lk~~~~~~~~~~~~~~~~-----~~~~e~~~l~~l~~~~i~~~~ 70 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDV------DTGRELAVKQVPFDPDSPETKKEVN-----ALECEIQLLKNLQHERIVQYY 70 (263)
T ss_pred CcccccceecCCCceEEEEEEEc------CCCcEEEEEEEeecccchhhHHHHH-----HHHHHHHHHHhCCCCCeeeeE
Confidence 46899999999999999998752 5678899999875432221111110 012699999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++..++.+++||||+++ +|.+++.. .+.+++..++.++.|++.||.|||+.||+||||||+||+++.++ .++|+
T Consensus 71 ~~~~~~~~~~~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~--~~~l~ 146 (263)
T cd06625 71 GCLRDDETLSIFMEYMPGGSVKDQLKA--YGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAG--NVKLG 146 (263)
T ss_pred EEEccCCeEEEEEEECCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CEEEe
Confidence 999999999999999987 99999873 34578888899999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++.......... ......++..|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 147 dfg~~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i-------l~el~~g~~p 206 (263)
T cd06625 147 DFGASKRLQTICSSGT--------GMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCT-------VVEMLTEKPP 206 (263)
T ss_pred ecccceeccccccccc--------cccCCCcCccccCcceeccCCCCchhhhHHHHHH-------HHHHHhCCCC
Confidence 9999975432111100 0012247788999999998888899999999987 6667777654
No 213
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=1.2e-22 Score=220.22 Aligned_cols=245 Identities=22% Similarity=0.299 Sum_probs=191.4
Q ss_pred cccCCCceec--cCCC-CCCCCCcccccccCccCCCCceEeee----eehhh-hhccCcceeeeecCcceEEEeeccCCC
Q 000399 1279 LMKCEPWFWF--PTPA-ASWDGPDFLGRVGGLKDESPWKIKAS----ILSSI-RAHHGALRSVAVGQDECTVFTAGIGPG 1350 (1566)
Q Consensus 1279 ~~~H~~~V~~--fSpd-g~~~~~~~LaSgS~D~~I~vWdl~~~----~l~tl-~gH~~~V~slafspd~~~LaSgS~~~~ 1350 (1566)
..+|.+.+|. ++|. |.. |||||.|+.|++|+..++ +...+ .+|+.+|+++||+|.|++|++||-
T Consensus 10 ~~gh~~r~W~~awhp~~g~i-----lAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSF--- 81 (312)
T KOG0645|consen 10 LSGHKDRVWSVAWHPGKGVI-----LASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASF--- 81 (312)
T ss_pred ecCCCCcEEEEEeccCCceE-----EEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeec---
Confidence 3468888887 7887 777 999999999999999842 33333 489999999999999999999985
Q ss_pred cccceeeEEeccc--ccccccccccccccceEEeecCCceeec--cCcEEEeecCCC---cEEEEeecccccccc-----
Q 000399 1351 FKGTVQKWELTRI--NCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG---KLLSVFAEQSMDSLH----- 1418 (1566)
Q Consensus 1351 ~D~tVrlWDl~tg--~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg---~~l~~l~~h~~~~~~----- 1418 (1566)
|.|+.||.-..+ +|+.+++||+..|.|++|+++|++||+| |++|.||.+..+ .++.++++|...+..
T Consensus 82 -D~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHP 160 (312)
T KOG0645|consen 82 -DATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHP 160 (312)
T ss_pred -cceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCcEEEEeeeccccccccEEEEcC
Confidence 999999987644 7899999999999999999999999988 999999999754 578888888765433
Q ss_pred ------cCCCCCcccccccCCCC----CCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCcee
Q 000399 1419 ------GGSPSSSISKINTDQVG----MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKL 1488 (1566)
Q Consensus 1419 ------~~~~~~~~~~~~~~~~~----~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l 1488 (1566)
+++.++.+++|...... ...+.+|++-|.+++|++. |..+++++.|++|+||-..+.
T Consensus 161 t~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~----------G~rl~s~sdD~tv~Iw~~~~~--- 227 (312)
T KOG0645|consen 161 TEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNI----------GSRLVSCSDDGTVSIWRLYTD--- 227 (312)
T ss_pred CcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCC----------CceEEEecCCcceEeeeeccC---
Confidence 34445555555433222 3445678888999999987 899999999999999987622
Q ss_pred eeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCc------eeE-EeeccCceeeEee
Q 000399 1489 HLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN------VIA-SWRAHDGYVTKVR 1561 (1566)
Q Consensus 1489 ~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk------~l~-~l~gH~~~V~~Va 1561 (1566)
+.+ .|...++.+.+. + ..||||+.|+.|++|.-..+- .+. .-.+|+..|++|+
T Consensus 228 --~~~-----~~sr~~Y~v~W~-~------------~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~~~~aHe~dVNsV~ 287 (312)
T KOG0645|consen 228 --LSG-----MHSRALYDVPWD-N------------GVIASGGGDDAIRLFKESDSPDEPSWNLLAKKEGAHEVDVNSVQ 287 (312)
T ss_pred --cch-----hcccceEeeeec-c------------cceEeccCCCEEEEEEecCCCCCchHHHHHhhhcccccccceEE
Confidence 111 245666667665 2 279999999999999766431 122 2357999999999
Q ss_pred eecc
Q 000399 1562 IISK 1565 (1566)
Q Consensus 1562 fspd 1565 (1566)
|+|.
T Consensus 288 w~p~ 291 (312)
T KOG0645|consen 288 WNPK 291 (312)
T ss_pred EcCC
Confidence 9994
No 214
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.87 E-value=7.9e-24 Score=242.36 Aligned_cols=199 Identities=18% Similarity=0.181 Sum_probs=164.6
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|.+.+.||+|+||.||+|.++ .++..+++|.+...........++. +|+.+++.++||||+++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 66 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRK------ADKRVYAMKQIDLSKMNRREREEAI--------DEARVLAKLDSSYIIRYYE 66 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEc------CCCcEEEEEEeehhhCCHHHHHHHH--------HHHHHHHhcCCCCeehhee
Confidence 4788999999999999998753 5688899999876544444444444 5899999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++...+..|+||||+++ +|.+++.......++...+..++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~--~~~l~d 144 (256)
T cd08529 67 SFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYD--NVKIGD 144 (256)
T ss_pred eeccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCC--CEEEcc
Confidence 99999999999999986 999999854445678888899999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++....... ......+++.|+|||++.+..++...|.|+.|++ .+..+.|+.+
T Consensus 145 f~~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i-------l~~l~~g~~p 200 (256)
T cd08529 145 LGVAKLLSDNTN-----------FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVV-------LYECCTGKHP 200 (256)
T ss_pred cccceeccCccc-----------hhhccccCccccCHHHhcCCCCCCccchHHHHHH-------HHHHHhCCCC
Confidence 999885442100 0112237788999999998888999999999987 6677777654
No 215
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.87 E-value=6e-23 Score=219.89 Aligned_cols=244 Identities=14% Similarity=0.149 Sum_probs=182.3
Q ss_pred ccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccc--cccccccccccc
Q 000399 1300 FLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN--CVSGYYGHEEVV 1376 (1566)
Q Consensus 1300 ~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~--~i~tl~gH~~~V 1376 (1566)
+|+|+|.|-+|++|...+| +..+++-..+.|+.+.+.||+..||+|+. ..||+||+.+++ ++.+|.+|++.|
T Consensus 12 iLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-----qhvRlyD~~S~np~Pv~t~e~h~kNV 86 (311)
T KOG0315|consen 12 ILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-----QHVRLYDLNSNNPNPVATFEGHTKNV 86 (311)
T ss_pred EEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-----CeeEEEEccCCCCCceeEEeccCCce
Confidence 4999999999999998877 88999977889999999999999999996 899999999875 588999999999
Q ss_pred cceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccch
Q 000399 1377 NDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGN 1454 (1566)
Q Consensus 1377 ~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~ 1454 (1566)
++|.|..+|+++.+| ||++||||++.-.+-+.++... .+....-+.+...++..++.+.+..++....+..-..-|+
T Consensus 87 taVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~s-pVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe 165 (311)
T KOG0315|consen 87 TAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNS-PVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPE 165 (311)
T ss_pred EEEEEeecCeEEEecCCCceEEEEeccCcccchhccCCC-CcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCC
Confidence 999999999999887 9999999999876666665432 2222222222333333333333333332222222222221
Q ss_pred ---hHHHhhhhhccceEEEEecCceEEEEEccCCc------eeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchh
Q 000399 1455 ---LYTCLHHIECVERLVVGIGNGSLRFIDINQGQ------KLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPS 1525 (1566)
Q Consensus 1455 ---~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~------~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~ 1525 (1566)
.+..++++|||..++++...|+..+|++-+.+ ++.+|+.|. +.+ ..+-+|||++
T Consensus 166 ~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~------~~i-----------l~C~lSPd~k 228 (311)
T KOG0315|consen 166 DDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHN------GHI-----------LRCLLSPDVK 228 (311)
T ss_pred CCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheeccc------ceE-----------EEEEECCCCc
Confidence 12234455669999999999999999998653 444455442 222 2344678889
Q ss_pred HHHhccCCCceeEEeeccC-ceeEEeeccCceeeEeeeeccC
Q 000399 1526 WIAAGLSSGQCRLFDVRSG-NVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1526 ~LaSGs~Dg~I~lWD~~sg-k~l~~l~gH~~~V~~VafspdG 1566 (1566)
+||++|+|.+++||++.+- +.-..+++|..+|..++||-||
T Consensus 229 ~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg 270 (311)
T KOG0315|consen 229 YLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADG 270 (311)
T ss_pred EEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCc
Confidence 9999999999999999987 6777889999999999999886
No 216
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.87 E-value=6.2e-24 Score=251.90 Aligned_cols=196 Identities=18% Similarity=0.186 Sum_probs=150.4
Q ss_pred ceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccc
Q 000399 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1566)
Q Consensus 167 ~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~ 246 (1566)
.++||+|+||.||+|+++ ...++..+|+|.+...... ..+. +|+.+|+.++||||+++++++..
T Consensus 6 g~~lG~G~~g~Vy~~~~~----~~~~~~~~a~k~~~~~~~~----~~~~--------~E~~~l~~l~h~niv~~~~~~~~ 69 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRK----DGKDEKEYALKQIEGTGIS----MSAC--------REIALLRELKHPNVIALQKVFLS 69 (317)
T ss_pred ceEeccCCCeeEEEEEec----CCCccceEEEEEecCCCCc----HHHH--------HHHHHHHhCCCCCeeeEEEEEec
Confidence 468999999999998742 1235678999987643211 1222 69999999999999999999853
Q ss_pred --cCceeeeccCCccchhhhhccC-------cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccc----ccc
Q 000399 247 --SGLITSVIPKTPYTLENILQFS-------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT----DSC 313 (1566)
Q Consensus 247 --~~~l~LV~E~~~gsL~~~l~~~-------~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~----~~~ 313 (1566)
+..+|+||||++++|.+++... ....+++..++.++.||+.||.|||++||+||||||+|||+. .++
T Consensus 70 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~ 149 (317)
T cd07867 70 HSDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG 149 (317)
T ss_pred cCCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCC
Confidence 5678999999999988887532 122467888899999999999999999999999999999994 444
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~ag 392 (1566)
.+||+|||+++......... .......+|+.|+|||++.+ ..++..+|+|+.|++ .+..+.|
T Consensus 150 --~~kl~DfG~a~~~~~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~i-------l~el~tg 212 (317)
T cd07867 150 --RVKIADMGFARLFNSPLKPL--------ADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCI-------FAELLTS 212 (317)
T ss_pred --cEEEeeccceeccCCCcccc--------cccCcceecccccCcHHhcCCCccCcHHHHHhHHHH-------HHHHHhC
Confidence 79999999998644211100 01123458899999998876 457889999999988 7777778
Q ss_pred ccc
Q 000399 393 RRW 395 (1566)
Q Consensus 393 rs~ 395 (1566)
+.+
T Consensus 213 ~~~ 215 (317)
T cd07867 213 EPI 215 (317)
T ss_pred CCC
Confidence 653
No 217
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.87 E-value=6.1e-24 Score=247.03 Aligned_cols=206 Identities=14% Similarity=0.096 Sum_probs=160.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|.+.+.||+|+||.||+|.+.. .....++..+|+|.+..... ......+. +|+++|+.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~-~~~~~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~l~~l~~~~i~~~ 73 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYH-LEPENDKELVAVKTLKETAS-NDARKDFE--------REAELLTNFQHENIVKF 73 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeecc-ccCcCCcceEEEEeecccCC-HHHHHHHH--------HHHHHHHhcCCCCchhe
Confidence 3579999999999999999987531 11124567899999865322 11223344 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCc------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCc
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 307 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NI 307 (1566)
++++......++||||+++ +|.+++.... ...+++..+..++.|++.|+.|||++|++||||||+||
T Consensus 74 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~ni 153 (280)
T cd05049 74 YGVCTEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNC 153 (280)
T ss_pred eeEEecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceE
Confidence 9999999999999999987 9999986421 23467778899999999999999999999999999999
Q ss_pred cccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHH
Q 000399 308 LLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFL 387 (1566)
Q Consensus 308 Ll~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~l 387 (1566)
+++.++ .+||+|||+++......... ......+++.|+|||++.+..++..+|+|+.|++ .+
T Consensus 154 li~~~~--~~kl~d~g~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i-------l~ 215 (280)
T cd05049 154 LVGYDL--VVKIGDFGMSRDVYTTDYYR---------VGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVV-------LW 215 (280)
T ss_pred EEcCCC--eEEECCcccceecccCccee---------cCCCCcccceecChhhhccCCcchhhhHHHHHHH-------HH
Confidence 999998 79999999997543211100 0112235678999999998899999999999987 55
Q ss_pred Hhhc-ccc
Q 000399 388 NKLA-GRR 394 (1566)
Q Consensus 388 n~~a-grs 394 (1566)
..++ |+.
T Consensus 216 e~~~~g~~ 223 (280)
T cd05049 216 EIFTYGKQ 223 (280)
T ss_pred HHHhcCCC
Confidence 5665 554
No 218
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.87 E-value=1.2e-23 Score=246.36 Aligned_cols=199 Identities=20% Similarity=0.264 Sum_probs=160.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.++ .++..+|+|.+....... ....+. +|+.+++.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~------~~~~~~~iK~~~~~~~~~-~~~~~~--------~E~~~l~~l~h~~i~~~ 68 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSK------LTGQLVALKEIRLEHEEG-APFTAI--------REASLLKDLKHANIVTL 68 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEc------CCCcEEEEEEEecccccC-CchhHH--------HHHHHHhhCCCcceeeE
Confidence 578999999999999999998863 467889999987543221 112222 59999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++++.+++..|+||||++++|.+++...+ ..+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~--~~kl~ 145 (291)
T cd07844 69 HDIIHTKKTLTLVFEYLDTDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERG--ELKLA 145 (291)
T ss_pred EEEEecCCeEEEEEecCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCC--CEEEC
Confidence 99999999999999999999999887433 3578888999999999999999999999999999999999998 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... . .....++..|+|||++.+ ..++..+|+|+.|++ .+..++|+.+
T Consensus 146 dfg~~~~~~~~~~-----~------~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~i-------l~~l~~g~~~ 203 (291)
T cd07844 146 DFGLARAKSVPSK-----T------YSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCI-------FYEMATGRPL 203 (291)
T ss_pred ccccccccCCCCc-----c------ccccccccccCCcHHhhcCcccCcHHHHHHHHHH-------HHHHHhCCCC
Confidence 9999874321000 0 001125778999998865 457889999999987 6667777653
No 219
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.87 E-value=2.5e-24 Score=246.77 Aligned_cols=196 Identities=21% Similarity=0.296 Sum_probs=163.1
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
|++++.||+|+||.||++++. .++..+|+|.+.............. +|+.+++.++||||++++++
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~------~~~~~~~~K~~~~~~~~~~~~~~~~--------~e~~~~~~l~~~~i~~~~~~ 66 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNK------KNGQKVAVKIIDKSEIEEEEREENI--------REIKILRRLRHPNIVQILDV 66 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEET------TTTEEEEEEEEESTTHHHHHHHHHH--------HHHHHHHHHTBTTBCHEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEEC------CCCeEEEEEEeccccccccccchhh--------hhhhcccccccccccccccc
Confidence 788999999999999999874 5677899999987644433322222 48899999999999999999
Q ss_pred ccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 244 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
+......++||||+++ +|.+++. ....+++..+..++.||+.||.+||++||+||||||+||+++.++ .++|+||
T Consensus 67 ~~~~~~~~~v~~~~~~~~L~~~l~--~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~--~~~l~Df 142 (260)
T PF00069_consen 67 FQDDNYLYIVMEYCPGGSLQDYLQ--KNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENG--EVKLIDF 142 (260)
T ss_dssp EEESSEEEEEEEEETTEBHHHHHH--HHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTS--EEEESSG
T ss_pred cccccccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccc--ccccccc
Confidence 9999999999999998 9999998 456689999999999999999999999999999999999999888 6999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCccccccccccccc-ccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|.+...... .. ......+++.|+|||++. +..++...|+|+.|.+ .+.++.|+.+
T Consensus 143 g~~~~~~~~-------~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~i-------l~~l~~~~~p 198 (260)
T PF00069_consen 143 GSSVKLSEN-------NE----NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGII-------LYELLTGKLP 198 (260)
T ss_dssp TTTEESTST-------TS----EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHH-------HHHHHHSSSS
T ss_pred ccccccccc-------cc----ccccccccccccccccccccccccccccccccccc-------cccccccccc
Confidence 998743100 00 112334788999999998 7888999999999987 6777777654
No 220
>PHA02988 hypothetical protein; Provisional
Probab=99.87 E-value=4.4e-24 Score=250.10 Aligned_cols=188 Identities=10% Similarity=0.009 Sum_probs=152.6
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccc-
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT- 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~- 246 (1566)
..||+|++|.||+|.. ++..||||.+.+.........+.+. +|+.+|++++|||||++++++.+
T Consensus 26 ~~i~~g~~~~v~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~~-------~E~~~l~~l~h~nIv~~~g~~~~~ 90 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--------NNKEVIIRTFKKFHKGHKVLIDITE-------NEIKNLRRIDSNNILKIYGFIIDI 90 (283)
T ss_pred eEEeeCCceEEEEEEE--------CCEEEEEEeccccccccHHHHHHHH-------HHHHHHHhcCCCCEEEEeeeEEec
Confidence 6799999999998773 6789999998764332222112222 69999999999999999999876
Q ss_pred ---cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhhhhhcC
Q 000399 247 ---SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 247 ---~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
...+++||||+++ +|.+++.. ...++......++.|++.||.|||+ .+++||||||+|||++.++ .+||+|
T Consensus 91 ~~~~~~~~lv~Ey~~~g~L~~~l~~--~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~--~~kl~d 166 (283)
T PHA02988 91 VDDLPRLSLILEYCTRGYLREVLDK--EKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENY--KLKIIC 166 (283)
T ss_pred ccCCCceEEEEEeCCCCcHHHHHhh--CCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCC--cEEEcc
Confidence 3578999999997 99999974 3457788889999999999999998 5999999999999999998 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccc--cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS--MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~--~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++..... . ....++..|+|||++.+ ..++.+.|+|+.|++ .+..++|+.+
T Consensus 167 fg~~~~~~~~--------~------~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvi-------l~el~~g~~P 221 (283)
T PHA02988 167 HGLEKILSSP--------P------FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVV-------LWEIFTGKIP 221 (283)
T ss_pred cchHhhhccc--------c------ccccCcccccCHHHhhhccccccchhhhhHHHHH-------HHHHHHCCCC
Confidence 9999854321 0 01237788999999976 678899999999988 7777788764
No 221
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.87 E-value=6.7e-24 Score=246.85 Aligned_cols=197 Identities=15% Similarity=0.081 Sum_probs=152.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.++- ......+..+|+|.+.... ......++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~-~~~~~~~~~~aik~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~iv~~ 74 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKG-VVKDEPETRVAIKTVNEAA-SMRERIEFL--------NEASVMKEFNCHHVVRL 74 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEecc-CCCCCceeEEEEEeccccC-CHHHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 4679999999999999999876421 0112345779999875432 112223344 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcc--------cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPN--------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~--------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~ 311 (1566)
++++......++||||+++ +|.++++.... ..++...+..++.|++.||.|||++|++||||||+||++++
T Consensus 75 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~ 154 (277)
T cd05062 75 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE 154 (277)
T ss_pred EEEEcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcC
Confidence 9999999999999999996 99999864211 12455677889999999999999999999999999999999
Q ss_pred cchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 312 ~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
++ .+||+|||+++.......... .....++..|+|||++.+..++...|+|+.|++
T Consensus 155 ~~--~~~l~dfg~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 210 (277)
T cd05062 155 DF--TVKIGDFGMTRDIYETDYYRK---------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 210 (277)
T ss_pred CC--CEEECCCCCccccCCcceeec---------CCCCccCHhhcChhHhhcCCcCchhHHHHHHHH
Confidence 88 799999999985432111000 011235678999999988888999999999987
No 222
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.87 E-value=9.3e-24 Score=247.63 Aligned_cols=194 Identities=22% Similarity=0.234 Sum_probs=162.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+|++.+.||+|+||.||++.+. .++..+|+|++.+....... ...+. +|+++|++++||||++++
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 67 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHK------GSGKYYALKILSKAKIVKLKQVEHVL--------NEKRILQSIRHPFLVNLY 67 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEc------CCCCEEEEEEEEHHHhhhhhHHHHHH--------HHHHHHHhCCCCCcccee
Confidence 6899999999999999988863 46888999998765432222 22233 699999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++...+.+|+||||+++ +|.+++.. ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 68 ~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~--~~kl~ 143 (290)
T cd05580 68 GSFQDDSNLYLVMEYVPGGELFSHLRK--SGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDG--YIKIT 143 (290)
T ss_pred eEEEcCCeEEEEEecCCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCC--CEEEe
Confidence 999999999999999965 99999974 35678999999999999999999999999999999999999998 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++..... .....+++.|+|||.+.+..++...|+|+.|++ .+..+.|+.+
T Consensus 144 dfg~~~~~~~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i-------l~~l~~g~~p 197 (290)
T cd05580 144 DFGFAKRVKGR--------------TYTLCGTPEYLAPEIILSKGYGKAVDWWALGIL-------IYEMLAGYPP 197 (290)
T ss_pred eCCCccccCCC--------------CCCCCCCccccChhhhcCCCCCccccHHHHHHH-------HHHHHhCCCC
Confidence 99999864421 011237888999999988888889999999987 6777778764
No 223
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.87 E-value=1.4e-23 Score=249.57 Aligned_cols=204 Identities=18% Similarity=0.168 Sum_probs=154.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++.+.||+|+||.||+|.+.. ........+|+|.+.... ......++. +|+.+++.++||||+++
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~--~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~niv~~ 74 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIP--EGEKVKIPVAIKELREAT-SPKANKEIL--------DEAYVMASVDNPHVCRL 74 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEec--CCCccceeEEEEeccccC-CHHHHHHHH--------HHHHHHHhCCCCCCCeE
Confidence 3479999999999999999987421 111123348999886432 222223344 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++... ..++|+||+++ +|.+++... ...++...+..++.||+.||+|||++||+||||||+|||++.++ .+||
T Consensus 75 ~g~~~~~-~~~~v~e~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~--~~kl 150 (316)
T cd05108 75 LGICLTS-TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQ--HVKI 150 (316)
T ss_pred EEEEcCC-CceeeeecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCC--cEEE
Confidence 9998765 57789999986 999999743 23467778889999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-cccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs~ 395 (1566)
+|||+++......... ...+..++..|+|||.+.+..++...|+|+.|++ .+..++ |+.+
T Consensus 151 ~DfG~a~~~~~~~~~~---------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~-------l~el~t~g~~p 211 (316)
T cd05108 151 TDFGLAKLLGADEKEY---------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVT-------VWELMTFGSKP 211 (316)
T ss_pred ccccccccccCCCcce---------eccCCccceeecChHHhccCCCCchhhhHHHHHH-------HHHHHcCCCCC
Confidence 9999998654211100 0111224567999999998889999999999987 555554 5443
No 224
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.87 E-value=1.5e-23 Score=251.87 Aligned_cols=205 Identities=17% Similarity=0.169 Sum_probs=157.1
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l 240 (1566)
++|++.+.||+|+||.||+|.+.- .+...+++.||+|++.... .......+. +|+.+++++ +||||+++
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~-~~~~~~~~~va~K~~~~~~-~~~~~~~~~--------~E~~~~~~l~~h~niv~~ 76 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFG-IEKSASCRTVAVKMLKEGA-TASEYKALM--------TELKILIHIGHHLNVVNL 76 (337)
T ss_pred HHhhhhcccccCcCceEEeccccc-cccccccceeeeeeccCCC-CHHHHHHHH--------HHHHHHHhhccCcchhhe
Confidence 589999999999999999987421 2223457889999986432 112222333 599999999 79999999
Q ss_pred cccccc-cCceeeeccCCcc-chhhhhccCcc------------------------------------------------
Q 000399 241 LGLLKT-SGLITSVIPKTPY-TLENILQFSPN------------------------------------------------ 270 (1566)
Q Consensus 241 ~~~~~~-~~~l~LV~E~~~g-sL~~~l~~~~~------------------------------------------------ 270 (1566)
++++.. ...++++|||+++ +|.+++.....
T Consensus 77 ~~~~~~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (337)
T cd05054 77 LGACTKPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDV 156 (337)
T ss_pred eeeEecCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhc
Confidence 998865 4578999999997 99988853211
Q ss_pred -----------cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCccccccccCCCCC
Q 000399 271 -----------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTS 339 (1566)
Q Consensus 271 -----------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~ 339 (1566)
..++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++.........
T Consensus 157 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~--~vkL~DfG~a~~~~~~~~~~---- 230 (337)
T cd05054 157 EEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDPDYV---- 230 (337)
T ss_pred ccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCC--cEEEeccccchhcccCcchh----
Confidence 2467777889999999999999999999999999999999988 79999999998643211100
Q ss_pred CceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 340 PMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 340 ~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
......++..|+|||++.+..++...|+|+.|++ .+..+. |+.
T Consensus 231 -----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~-------l~el~t~g~~ 274 (337)
T cd05054 231 -----RKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVL-------LWEIFSLGAS 274 (337)
T ss_pred -----hccCCCCCccccCcHHhcCCCCCccccHHHHHHH-------HHHHHHcCCC
Confidence 0112345677999999998899999999999987 555554 554
No 225
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.87 E-value=6.3e-24 Score=247.53 Aligned_cols=206 Identities=15% Similarity=0.128 Sum_probs=159.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.+.. .+.......+|+|.+.... ......++. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~~~~~~~v~~K~~~~~~-~~~~~~~~~--------~ei~~l~~l~h~~i~~~ 73 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTG-PNERLSATSVAIKTLKENA-EPKVQQEFR--------QEAELMSDLQHPNIVCL 73 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEec-CCCCcceeeEEEEecccCC-CHHHHHHHH--------HHHHHHHhcCCcccceE
Confidence 4589999999999999999887532 1112345678999876432 111222333 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcc--------------cccchhHHHHHHHHHHHHHHHHhhccccCCCccCC
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPN--------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 305 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~--------------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~ 305 (1566)
++++...+..|++|||+++ +|.+++..... ..++...++.++.|++.||.|||++||+||||||+
T Consensus 74 ~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~ 153 (283)
T cd05048 74 LGVCTKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAAR 153 (283)
T ss_pred EEEEcCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccc
Confidence 9999999999999999986 99999874211 34677788899999999999999999999999999
Q ss_pred CccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhh
Q 000399 306 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 385 (1566)
Q Consensus 306 NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~ 385 (1566)
||++++++ .+||+|||+++......... ......+++.|+|||.+.+..++...|+|+.|++
T Consensus 154 Nil~~~~~--~~~L~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~i------- 215 (283)
T cd05048 154 NCLVGEGL--TVKISDFGLSRDIYSADYYR---------VQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVV------- 215 (283)
T ss_pred eEEEcCCC--cEEECCCcceeecccccccc---------ccCCCcccccccCHHHhccCcCchhhhHHHHHHH-------
Confidence 99999988 79999999998543211000 1112236778999999988889999999999987
Q ss_pred HHHhhc-ccc
Q 000399 386 FLNKLA-GRR 394 (1566)
Q Consensus 386 ~ln~~a-grs 394 (1566)
.+..++ |+.
T Consensus 216 l~el~~~g~~ 225 (283)
T cd05048 216 LWEIFSYGLQ 225 (283)
T ss_pred HHHHHcCCCC
Confidence 555554 543
No 226
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.87 E-value=9.3e-24 Score=243.97 Aligned_cols=194 Identities=15% Similarity=0.161 Sum_probs=155.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|..+. ...+...+|+|.+.... ......++. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~---~~~~~~~vaik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 70 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKL---PGKKEIDVAIKTLKAGS-SDKQRLDFL--------TEASIMGQFDHPNIIRL 70 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEcc---CCCCcceEEEEEcCCCC-ChHHHHHHH--------HHHHHHHhCCCCCcceE
Confidence 3579999999999999999987532 11345678999876532 222233444 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+...+..++||||+++ +|.+++... .+.++...++.++.|++.||.|||+++|+||||||+||++++++ .+||
T Consensus 71 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~--~~~l 147 (266)
T cd05033 71 EGVVTKSRPVMIITEYMENGSLDKFLREN-DGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNL--VCKV 147 (266)
T ss_pred eEEEecCCceEEEEEcCCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCC--CEEE
Confidence 9999999999999999987 999999743 33578888999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
+|||+++......... ......++..|+|||.+.+..++...|+|+.|++
T Consensus 148 ~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~ 197 (266)
T cd05033 148 SDFGLSRRLEDSEATY---------TTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIV 197 (266)
T ss_pred Cccchhhcccccccce---------eccCCCCCccccChhhhccCCCccccchHHHHHH
Confidence 9999998654111100 0011224567999999988889999999999987
No 227
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.87 E-value=9e-24 Score=244.27 Aligned_cols=202 Identities=15% Similarity=0.131 Sum_probs=154.7
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
|++++.||+|+||.||+|...- ....+..+|+|.+...........++. +|+.+|+.++||||++++++
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~---~~~~~~~vaiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~ 69 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQ---DDGSQLKVAVKTMKLDIHTYSEIEEFL--------SEAACMKDFDHPNVMKLIGV 69 (273)
T ss_pred CccccccCcCCCceEEEEEEec---CCCCcceEEEEEeccCcCCHHHHHHHH--------HHHHHHHhCCCCCeeeEEee
Confidence 5788999999999999887521 112357899999875433333333444 58999999999999999998
Q ss_pred ccccCc------eeeeccCCcc-chhhhhccC----cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 244 LKTSGL------ITSVIPKTPY-TLENILQFS----PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 244 ~~~~~~------l~LV~E~~~g-sL~~~l~~~----~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
+..... .++||||+++ +|..++... ....+++..++.++.|++.||.|||+++|+||||||+||+++++
T Consensus 70 ~~~~~~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~ 149 (273)
T cd05035 70 CFEASSLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLRED 149 (273)
T ss_pred eccCCccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCC
Confidence 865543 7999999996 999888532 22357888899999999999999999999999999999999998
Q ss_pred chhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-
Q 000399 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA- 391 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a- 391 (1566)
+ .+||+|||+++.......... . ....++..|+|||.+.+..++...|+|+.|++ .+..+.
T Consensus 150 ~--~~kl~dfg~~~~~~~~~~~~~---~------~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~i-------l~el~~~ 211 (273)
T cd05035 150 M--TVCVADFGLSKKIYSGDYYRQ---G------RIAKMPVKWIAIESLADRVYTSKSDVWAFGVT-------MWEIATR 211 (273)
T ss_pred C--eEEECCccceeeccccccccc---c------ccccCCccccCHhhcccCCCCcccchHHHHHH-------HHHHHhC
Confidence 8 799999999986442111000 0 01124567999999988889999999999988 566665
Q ss_pred ccc
Q 000399 392 GRR 394 (1566)
Q Consensus 392 grs 394 (1566)
|..
T Consensus 212 g~~ 214 (273)
T cd05035 212 GQT 214 (273)
T ss_pred CCC
Confidence 544
No 228
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.87 E-value=3.8e-24 Score=267.06 Aligned_cols=196 Identities=14% Similarity=0.099 Sum_probs=151.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~l~ 241 (1566)
++++.+.|.+|||+.||+|++. ..+..+|+|++.-. +..+. +.+. +||++|+.|+ |||||.++
T Consensus 38 ~v~V~~vLAEGGFa~VYla~~~------~~~~~~AlKrm~~~--de~~L-~~v~-------~EI~~MK~L~gh~nIV~yi 101 (738)
T KOG1989|consen 38 RVTVEKVLAEGGFAQVYLAQDV------KGGKKYALKRMYVN--DEEAL-NAVK-------REIDIMKLLSGHKNIVSYI 101 (738)
T ss_pred EEEEEEEEccCCcEEEEEEEec------CCCceeeeeeeecC--CHHHH-HHHH-------HHHHHHHHhcCCCceeeEe
Confidence 6889999999999999999963 33488999998754 22222 2332 7999999997 99999999
Q ss_pred cccc-cc------CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhcc--ccCCCccCCCccccc
Q 000399 242 GLLK-TS------GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLTD 311 (1566)
Q Consensus 242 ~~~~-~~------~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~g--IiHrDLKp~NILl~~ 311 (1566)
+... .. -.++|.||||.| .|-+++..+-...|++.++..|++|+|+|+.+||.+. |||||||-|||||+.
T Consensus 102 dss~~~~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~ 181 (738)
T KOG1989|consen 102 DSSAINRSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSA 181 (738)
T ss_pred ccccccccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcC
Confidence 9432 11 257888999995 9999998655556999999999999999999999988 999999999999999
Q ss_pred cchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccc---cccchhhcccccccccc
Q 000399 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS---QSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 312 ~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l---~~~~y~~~~d~Ws~G~i 378 (1566)
++ ..||||||.|......... ......+. -.-....|+.|++||++ .+...+++.|+|..|||
T Consensus 182 ~g--~~KLCDFGSatt~~~~~~~-~~e~~~ve-~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGcl 247 (738)
T KOG1989|consen 182 DG--NYKLCDFGSATTKILSPTS-AQEVNYVE-EEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCL 247 (738)
T ss_pred CC--CEEeCcccccccccCCCcc-HHHHHHHH-HHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHH
Confidence 99 7999999998753321100 00000000 00112378999999987 57788999999999997
No 229
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.87 E-value=1.5e-23 Score=240.92 Aligned_cols=195 Identities=15% Similarity=0.202 Sum_probs=157.0
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||++.. .++..+|+|.+...... ..++. +|+.+|+.++||||++++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~-------~~~~~~a~K~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~~ 65 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKW-------RAQIKVAIKAINEGAMS---EEDFI--------EEAKVMMKLSHPKLVQLY 65 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEe-------ccCceEEEEecccCCcc---HHHHH--------HHHHHHHHCCCCCceeEE
Confidence 5799999999999999998764 34567899987643222 22344 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++...+..++||||+++ +|.+++.... ..++...++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 66 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~kl~ 142 (256)
T cd05114 66 GVCTQQKPLYIVTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTG--VVKVS 142 (256)
T ss_pred EEEccCCCEEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCC--eEEEC
Confidence 999999999999999986 9999987432 3467888899999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
|||+++........ ......++..|+|||++.+..++...|.|+.|++ .+..++ |+.
T Consensus 143 d~g~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~-------l~el~~~g~~ 200 (256)
T cd05114 143 DFGMTRYVLDDEYT----------SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVL-------MWEVFTEGKM 200 (256)
T ss_pred CCCCccccCCCcee----------ccCCCCCchhhCChhhcccCccchhhhhHHHHHH-------HHHHHcCCCC
Confidence 99999854321100 0112234567999999988889999999999987 566666 554
No 230
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.87 E-value=1.7e-23 Score=239.98 Aligned_cols=199 Identities=20% Similarity=0.252 Sum_probs=165.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|+.++.||+|+||.||.+++. .++..+++|.+...........++. +|+.+|++++|+||+++++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~~~ 66 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRT------EDDSLVVWKEVNLTRLSEKERRDAL--------NEIVILSLLQHPNIIAYYN 66 (256)
T ss_pred CceEeeEecccCCceEEEEEEc------CCCcEEEEEEEeecccchhHHHHHH--------HHHHHHHhCCCCCeeEEEe
Confidence 5899999999999999987753 5788899999876544444444444 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+.+.+++||||+++ +|.+++...+...+++..+..++.|++.||.|||+.|++||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~--~~kl~d 144 (256)
T cd08221 67 HFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAG--LIKLGD 144 (256)
T ss_pred EEecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCC--CEEECc
Confidence 99999999999999986 999999754445678889999999999999999999999999999999999998 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++....... ......+++.|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 145 ~~~~~~~~~~~~-----------~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i-------~~~l~~g~~~ 200 (256)
T cd08221 145 FGISKILGSEYS-----------MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCV-------LYELLTLKRT 200 (256)
T ss_pred CcceEEcccccc-----------cccccCCCccccCHhhcCCCCCCCcchhHHHHHH-------HHHHHHCCCC
Confidence 999985432110 1122347889999999988888889999999988 6667777664
No 231
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.87 E-value=1.2e-23 Score=251.39 Aligned_cols=203 Identities=15% Similarity=0.127 Sum_probs=157.7
Q ss_pred cceeeeec--chhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 166 PIAFIGIC--SYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 166 ~~~~IG~G--~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
++++||+| +||+||+++++ .++..||+|.+...... ....+++. +|+.+++.++||||++++++
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~------~~~~~vaiK~~~~~~~~-~~~~~~~~-------~e~~~l~~l~hpniv~~~~~ 67 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYK------PTGEYVTVRRINLEACT-NEMVTFLQ-------GELHVSKLFNHPNIVPYRAT 67 (327)
T ss_pred hhhhccccccceEEEEEEeec------ccCcEEEEEEechhhcc-HHHHHHHH-------HHHHHHHhcCCCCeeeEEEE
Confidence 57889999 67899998863 67899999998764332 22334444 69999999999999999999
Q ss_pred ccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 244 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
+..++..|+||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+|||++.++ .++++||
T Consensus 68 ~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~--~~~l~~~ 145 (327)
T cd08227 68 FIADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDG--KVYLSGL 145 (327)
T ss_pred EEECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCC--cEEEccc
Confidence 9999999999999996 999999754344578888999999999999999999999999999999999988 7999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCcccccccccccccc--cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS--MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~--~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|.+.......... .....+.....++..|+|||++.+ ..|+..+|+|+.|++ .+..++|+.+
T Consensus 146 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~i-------l~el~~g~~p 209 (327)
T cd08227 146 RSNLSMINHGQRL----RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGIT-------ACELANGHVP 209 (327)
T ss_pred chhhccccccccc----cccccccccccceecccChHHhhcccCCCCchhhHHHHHHH-------HHHHHHCCCC
Confidence 8765332111000 000001112346677999999875 458889999999987 6777778753
No 232
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.87 E-value=1.1e-22 Score=239.37 Aligned_cols=223 Identities=11% Similarity=0.164 Sum_probs=201.8
Q ss_pred ccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCccccee
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQ 1356 (1566)
Q Consensus 1280 ~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVr 1356 (1566)
..|++.|-+ |||...| ++++-..|+|.|||.+++ .++++.-..-+|++..|-..-+.+++||. |..||
T Consensus 10 ~~rSdRVKsVd~HPtePw-----~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsD----D~~Ir 80 (794)
T KOG0276|consen 10 QSRSDRVKSVDFHPTEPW-----ILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSD----DMQIR 80 (794)
T ss_pred hccCCceeeeecCCCCce-----EEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecC----CceEE
Confidence 347888888 8999998 999999999999999987 77888888899999999999999999998 99999
Q ss_pred eEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCC-cEEEEeecccccccccCCCCCcccccccCC
Q 000399 1357 KWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG-KLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1433 (1566)
Q Consensus 1357 lWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg-~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~ 1433 (1566)
|++..|++.+.+|+.|.+.|.||+.+|...++.|. |-+||+||.+.+ .|.++|.+|
T Consensus 81 Vfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH--------------------- 139 (794)
T KOG0276|consen 81 VFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGH--------------------- 139 (794)
T ss_pred EEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCc---------------------
Confidence 99999999999999999999999999999998766 899999999865 677778775
Q ss_pred CCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCC
Q 000399 1434 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSE 1513 (1566)
Q Consensus 1434 ~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~ 1513 (1566)
+..|.+++|+|. |.+.++++|-|+||++|.+.+..+..++++| ..-|++|++-+.+
T Consensus 140 ---------~HyVMqv~fnPk---------D~ntFaS~sLDrTVKVWslgs~~~nfTl~gH------ekGVN~Vdyy~~g 195 (794)
T KOG0276|consen 140 ---------EHYVMQVAFNPK---------DPNTFASASLDRTVKVWSLGSPHPNFTLEGH------EKGVNCVDYYTGG 195 (794)
T ss_pred ---------ceEEEEEEecCC---------CccceeeeeccccEEEEEcCCCCCceeeecc------ccCcceEEeccCC
Confidence 567999999997 6889999999999999999999999999987 4457889887654
Q ss_pred cccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeecc
Q 000399 1514 KMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1514 ~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafspd 1565 (1566)
. -.+|+||++|.+|++||..|..|++++.||.+.|..+.|+|.
T Consensus 196 d---------kpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~ 238 (794)
T KOG0276|consen 196 D---------KPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPE 238 (794)
T ss_pred C---------cceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCC
Confidence 2 258999999999999999999999999999999999999984
No 233
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.87 E-value=1.8e-22 Score=217.71 Aligned_cols=257 Identities=13% Similarity=0.050 Sum_probs=189.9
Q ss_pred cCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee---eehhhhhccCcceeeeecC-cceEEEeeccCCCcccc
Q 000399 1281 KCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGT 1354 (1566)
Q Consensus 1281 ~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~---~l~tl~gH~~~V~slafsp-d~~~LaSgS~~~~~D~t 1354 (1566)
.|...|.+ ++.+|.. |++|+.|+++.+|+++.. .--..+||++.|..++|+| ....|++++. |++
T Consensus 18 ~~~~~v~Sv~wn~~g~~-----lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~----dk~ 88 (313)
T KOG1407|consen 18 GHVQKVHSVAWNCDGTK-----LASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASG----DKT 88 (313)
T ss_pred hhhhcceEEEEcccCce-----eeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecC----Cce
Confidence 35555655 6788988 999999999999999876 2245689999999999988 5678999998 999
Q ss_pred eeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccC
Q 000399 1355 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTD 1432 (1566)
Q Consensus 1355 VrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~ 1432 (1566)
|++||+++++|........+.++ ++|+|+|++++.+ |..|.+.|.++.+.....+......-++-..+++.....+.
T Consensus 89 ir~wd~r~~k~~~~i~~~~eni~-i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~Fflt~G 167 (313)
T KOG1407|consen 89 IRIWDIRSGKCTARIETKGENIN-ITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLFFLTNG 167 (313)
T ss_pred EEEEEeccCcEEEEeeccCcceE-EEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEEEEecC
Confidence 99999999999988876666665 7899999998655 88999999998887765432211111111111121111111
Q ss_pred CC--CCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhcc
Q 000399 1433 QV--GMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICAC 1510 (1566)
Q Consensus 1433 ~~--~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s 1510 (1566)
.+ .++.. ..-.+|.++.-||.+-.|+.++|+|+++++|+.|..+.+||+...-|++.+..+.. +|+.+
T Consensus 168 lG~v~ILsy-psLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldw------pVRTl--- 237 (313)
T KOG1407|consen 168 LGCVEILSY-PSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDW------PVRTL--- 237 (313)
T ss_pred CceEEEEec-cccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccC------ceEEE---
Confidence 11 11111 12234444444554444455555699999999999999999999999998886633 34444
Q ss_pred CCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1511 GSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1511 ~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
.||.||++||+||+|..|-|=++.||..+..++ |+++-..|+|+|..
T Consensus 238 --------SFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~ 284 (313)
T KOG1407|consen 238 --------SFSHDGRMLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPKR 284 (313)
T ss_pred --------EeccCcceeeccCccceEEeEecccCCeEEEee-ccCCceeEEecCCC
Confidence 456788999999999999999999999999998 89999999999963
No 234
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.87 E-value=1.3e-23 Score=241.86 Aligned_cols=197 Identities=15% Similarity=0.154 Sum_probs=158.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|+++++||+|+||.||+|.. .++..+|+|.+..... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~-------~~~~~v~iK~~~~~~~---~~~~~~--------~e~~~l~~l~h~~i~~~ 66 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYY-------NNSTKVAVKTLKPGTM---SVQAFL--------EEANLMKTLQHDKLVRL 66 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEe-------cCCceEEEEEccCCch---hHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 46899999999999999998874 3456789998764322 122333 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+.+.+..++||||+++ +|.+++.......++...++.++.|++.||.|||+++++||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~--~~~l 144 (261)
T cd05072 67 YAVVTKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESL--MCKI 144 (261)
T ss_pred EEEEcCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCC--cEEE
Confidence 9999999999999999986 999999754445577788889999999999999999999999999999999998 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
+|||+++........ ......++..|+|||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 145 ~dfg~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~-------l~~l~t~g~~ 203 (261)
T cd05072 145 ADFGLARVIEDNEYT----------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGIL-------LYEIVTYGKI 203 (261)
T ss_pred CCCccceecCCCcee----------ccCCCccceecCCHHHhccCCCChhhhhhhhHHH-------HHHHHccCCC
Confidence 999999864421100 0112235567999999988888889999999987 556665 543
No 235
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.87 E-value=7.4e-24 Score=241.27 Aligned_cols=187 Identities=18% Similarity=0.235 Sum_probs=157.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccC--CC--
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH--PN-- 236 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~H--pN-- 236 (1566)
..+|++++.+|+|+||.|-++.+. +.+..||||+++.-....+ ++.-|+++|+++.+ ||
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~------~~~~~vAlKIik~V~kYre-----------Aa~iEi~vLqki~~~DP~g~ 150 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDR------ETKEHVALKIIKNVDKYRE-----------AALIEIEVLQKINESDPNGK 150 (415)
T ss_pred ccceehhhhhcCCcccceEEEeec------CCCceehHHHHHHHHHHhh-----------HHHHHHHHHHHHHhcCCCCc
Confidence 568999999999999999998874 4589999999875222111 23358999999942 43
Q ss_pred --cccccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch
Q 000399 237 --VAPVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1566)
Q Consensus 237 --IV~l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~ 314 (1566)
+|++.++|.-.++.|||+|.++-+++++|+.+...+++..+++.+++|++.++++||+.+++|-||||+|||+.+...
T Consensus 151 ~rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~ 230 (415)
T KOG0671|consen 151 FRCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEY 230 (415)
T ss_pred eEEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccce
Confidence 889999999999999999999989999999877788999999999999999999999999999999999999854321
Q ss_pred ------------------hhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccc
Q 000399 315 ------------------SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRG 376 (1566)
Q Consensus 315 ------------------~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G 376 (1566)
..|||+|||.|+..... ....+.|..|+|||++.+..|...||+|+.|
T Consensus 231 ~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e~--------------hs~iVsTRHYRAPEViLgLGwS~pCDvWSiG 296 (415)
T KOG0671|consen 231 FKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHEH--------------HSTIVSTRHYRAPEVILGLGWSQPCDVWSIG 296 (415)
T ss_pred EEEeccCCccceeccCCCcceEEEecCCcceeccC--------------cceeeeccccCCchheeccCcCCccCceeee
Confidence 26799999999975531 1223588999999999999999999999999
Q ss_pred cc
Q 000399 377 EL 378 (1566)
Q Consensus 377 ~i 378 (1566)
||
T Consensus 297 CI 298 (415)
T KOG0671|consen 297 CI 298 (415)
T ss_pred eE
Confidence 99
No 236
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.87 E-value=2.3e-23 Score=238.85 Aligned_cols=199 Identities=20% Similarity=0.164 Sum_probs=160.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
.|++++.||+|+||.||++.++ .++..+|+|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHR------TDGKQYVIKKLNLRNASRRERKAAE--------QEAQLLSQLKHPNIVAYRE 66 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEc------CCCcEEEEEEEehhhcCHHHHHHHH--------HHHHHHHhCCCCCeeeeee
Confidence 4899999999999999998863 4577899999876443333333333 5889999999999999999
Q ss_pred ccccc-CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 243 LLKTS-GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 243 ~~~~~-~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
.+... ..+|+||||+++ +|.+++.......+++..++.++.|++.|+.+||++||+||||||+||+++.++ .++|+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~--~~~l~ 144 (257)
T cd08223 67 SWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTN--IIKVG 144 (257)
T ss_pred eecCCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCC--cEEEe
Confidence 88644 468999999986 999999754455678899999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++...... . ......+++.|+|||++.+..++...|+|+.|++ .+..++|+.+
T Consensus 145 df~~~~~~~~~~-----~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i-------l~~l~~g~~~ 201 (257)
T cd08223 145 DLGIARVLENQC-----D------MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCC-------VYEMATLKHA 201 (257)
T ss_pred cccceEEecccC-----C------ccccccCCcCccChhHhcCCCCCchhhhHHHHHH-------HHHHHcCCCC
Confidence 999987543210 0 0112347888999999998888899999999987 6666777654
No 237
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.87 E-value=2.5e-23 Score=242.85 Aligned_cols=204 Identities=16% Similarity=0.199 Sum_probs=157.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.... .....+..+|+|.+.... ..+...++. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~--~~~~~~~~~~ik~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~niv~~ 72 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYL--PGMDHAQLVAIKTLKDIN-NPQQWGEFQ--------QEASLMAELHHPNIVCL 72 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEec--CCCCCcceEEEEeccCCC-CHHHHHHHH--------HHHHHHhhCCCCCeeeE
Confidence 3578999999999999999987421 112456889999986432 122222333 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCc---------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccC
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP---------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 304 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~---------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp 304 (1566)
++++...+..|+||||+++ +|.+++.... ...+++..+..++.|++.||.|||++||+||||||
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp 152 (283)
T cd05090 73 LGVVTQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAA 152 (283)
T ss_pred EEEEecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhcccc
Confidence 9999999999999999986 9999885221 12366777888999999999999999999999999
Q ss_pred CCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhh
Q 000399 305 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYL 384 (1566)
Q Consensus 305 ~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL 384 (1566)
+|||+++++ .+||+|||+++......... ......++..|+|||.+.+..++...|+|+.|++
T Consensus 153 ~nili~~~~--~~kl~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i------ 215 (283)
T cd05090 153 RNILIGEQL--HVKISDLGLSREIYSADYYR---------VQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVV------ 215 (283)
T ss_pred ceEEEcCCC--cEEeccccccccccCCccee---------cccCCCccceecChHHhccCCCCchhhhHHHHHH------
Confidence 999999988 79999999998643211000 0112235667999999988888999999999987
Q ss_pred hHHHhhc-cc
Q 000399 385 LFLNKLA-GR 393 (1566)
Q Consensus 385 ~~ln~~a-gr 393 (1566)
.+..++ |.
T Consensus 216 -l~el~~~g~ 224 (283)
T cd05090 216 -LWEIFSFGL 224 (283)
T ss_pred -HHHHHcCCC
Confidence 555665 54
No 238
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.87 E-value=2e-23 Score=243.35 Aligned_cols=190 Identities=15% Similarity=0.108 Sum_probs=156.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++++.||+|+||.||+|.+. .++..+|+|.+..+. ......++. +|+.+|++++||||+++++
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~------~~~~~~aiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~ 66 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHL------LTRRILAVKVIPLDI-TVELQKQIM--------SELEILYKCDSPYIIGFYG 66 (279)
T ss_pred cchheeeeccCCCeEEEEEEEc------CCCcEEEEEEEecCC-ChHHHHHHH--------HHHHHHHhCCCCCeeeEEE
Confidence 6889999999999999998863 568889999987542 222223344 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+...+..++||||+++ +|..+. .+++..+..++.|++.||.|||++||+||||||+|||++.++ .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~--~~~l~d 138 (279)
T cd06619 67 AFFVENRISICTEFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRG--QVKLCD 138 (279)
T ss_pred EEEECCEEEEEEecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCC--CEEEee
Confidence 99999999999999997 665432 257778889999999999999999999999999999999998 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||++...... ......++..|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 139 fg~~~~~~~~-------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~-------l~~l~~g~~p 192 (279)
T cd06619 139 FGVSTQLVNS-------------IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGIS-------FMELALGRFP 192 (279)
T ss_pred CCcceecccc-------------cccCCCCChhhcCceeecCCCCCCcchHHHHHHH-------HHHHHhCCCC
Confidence 9999754311 0112348889999999998889999999999987 6667777653
No 239
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.87 E-value=1.3e-23 Score=243.17 Aligned_cols=196 Identities=15% Similarity=0.206 Sum_probs=153.3
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
..|++.+.||+|+||.||+|..+. .......+|+|.+.... ......++. +|+.+++.++||||++++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~---~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~ni~~~~ 71 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKL---PGKREIFVAIKTLKSGY-TEKQRRDFL--------SEASIMGQFDHPNIIHLE 71 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEec---CCCCceeEEEEEcCCCC-CHHHHHHHH--------HHHHHHHhCCCcCcceEE
Confidence 468999999999999999988532 11234579999986532 222233444 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+++..++||||+++ +|.++++.. .+.++...++.++.|++.||.|||++|++||||||+||+++.++ .+||+
T Consensus 72 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~--~~kl~ 148 (269)
T cd05065 72 GVVTKSRPVMIITEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNL--VCKVS 148 (269)
T ss_pred EEECCCCceEEEEecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCC--cEEEC
Confidence 999999999999999987 999998743 34578888999999999999999999999999999999999888 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||+++....... ..... ...+...+..|+|||.+.+..++...|+|+.|++
T Consensus 149 dfg~~~~~~~~~~-----~~~~~-~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~ 200 (269)
T cd05065 149 DFGLSRFLEDDTS-----DPTYT-SSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 200 (269)
T ss_pred CCccccccccCcc-----ccccc-cccCCCcceeecCHhHhccCcccchhhhhhhHHH
Confidence 9999885442111 00000 0011112456999999998889999999999987
No 240
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.86 E-value=1.2e-22 Score=227.55 Aligned_cols=242 Identities=18% Similarity=0.257 Sum_probs=199.0
Q ss_pred ccccccccchHHHHHHhhccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEee--eeehhhhhccCcceeeee
Q 000399 1260 RRVYDYHKSSVERQEATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA--SILSSIRAHHGALRSVAV 1335 (1566)
Q Consensus 1260 ~~~~~le~~~~~~~~~~~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~--~~l~tl~gH~~~V~slaf 1335 (1566)
-+++|.+....++-+. .|++.|.+ |+..|++ |+++|.|-.+++||.++ .+++++.||...|.+++|
T Consensus 132 ikv~D~~tg~~e~~Lr-----GHt~sv~di~~~a~Gk~-----l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f 201 (406)
T KOG0295|consen 132 IKVFDTETGELERSLR-----GHTDSVFDISFDASGKY-----LATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFF 201 (406)
T ss_pred EEEEEccchhhhhhhh-----ccccceeEEEEecCccE-----EEecCCccchhheeHHHHHHHHHHhcCcccceeeEEE
Confidence 3455555444444444 48888888 7777887 99999999999999987 388999999999999999
Q ss_pred cCcceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeeccc
Q 000399 1336 GQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQS 1413 (1566)
Q Consensus 1336 spd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~ 1413 (1566)
-|.|.+++|+|. |.+|+.||+.+|-|+.++.+|...|..++.+.+|..+||| |.+|++|-+.+++|...+.+|.
T Consensus 202 ~P~gd~ilS~sr----D~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hE 277 (406)
T KOG0295|consen 202 LPLGDHILSCSR----DNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHE 277 (406)
T ss_pred EecCCeeeeccc----ccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccc
Confidence 999999999998 9999999999999999999999999999999999999998 9999999999997776666543
Q ss_pred cc--------------------------ccccCCCCCcccccccCCCCC-CCCcccccccccccccchhHHHhhhhhccc
Q 000399 1414 MD--------------------------SLHGGSPSSSISKINTDQVGM-LNSNTLSSGILSTAFDGNLYTCLHHIECVE 1466 (1566)
Q Consensus 1414 ~~--------------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~V~svafsp~~~t~v~~~pdg~ 1466 (1566)
-. .....+.+..+++|+...+.. ..+.+|.++|..++|+|. |+
T Consensus 278 h~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~----------Gk 347 (406)
T KOG0295|consen 278 HPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPG----------GK 347 (406)
T ss_pred cceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCC----------Ce
Confidence 22 122223344455666555443 346689999999999998 99
Q ss_pred eEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeec
Q 000399 1467 RLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR 1542 (1566)
Q Consensus 1467 ~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~ 1542 (1566)
+|+++..|+++|+||+++++|.+++..| ...|+++.|+... .+++||+-|..+++|..+
T Consensus 348 yi~ScaDDktlrvwdl~~~~cmk~~~ah------~hfvt~lDfh~~~-----------p~VvTGsVdqt~KvwEcr 406 (406)
T KOG0295|consen 348 YILSCADDKTLRVWDLKNLQCMKTLEAH------EHFVTSLDFHKTA-----------PYVVTGSVDQTVKVWECR 406 (406)
T ss_pred EEEEEecCCcEEEEEeccceeeeccCCC------cceeEEEecCCCC-----------ceEEeccccceeeeeecC
Confidence 9999999999999999999999999866 5677777775332 389999999999999854
No 241
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.86 E-value=1.1e-23 Score=252.69 Aligned_cols=189 Identities=14% Similarity=0.135 Sum_probs=156.6
Q ss_pred cceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc--ccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 166 PIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE--SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 166 ~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~--~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
....||+|+|-+||+|.|. .+|..||...++..+..... ..+|. .|+++|+.|+|||||++|++
T Consensus 44 ~~evLGrGafKtVYka~De------~~giEVAWnqvk~~d~~q~~~~leR~~--------~Ev~lLKsL~H~NIirfy~S 109 (632)
T KOG0584|consen 44 FDEVLGRGAFKTVYKAFDE------EEGIEVAWNQVKIRDVTQSPEELERLY--------SEVHLLKSLKHPNIIRFYDS 109 (632)
T ss_pred hhhhcccccceeeeecccc------ccchhhHHHHHhHHHhhcChHHHHHHH--------HHHHHHccCCCCceeeeeeh
Confidence 4578999999999999984 68888988777655443322 24444 59999999999999999999
Q ss_pred ccccCc--eeeeccCCc-cchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhcc--ccCCCccCCCccccccchhhhh
Q 000399 244 LKTSGL--ITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 244 ~~~~~~--l~LV~E~~~-gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~g--IiHrDLKp~NILl~~~~~~~vK 318 (1566)
+.+..+ +.+|+|.+. |+|..|+++ .+.+....++.|++||++||.|||++. |||||||.+||+|+.+. ..||
T Consensus 110 W~d~~n~~in~iTEL~TSGtLr~Y~kk--~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~-G~VK 186 (632)
T KOG0584|consen 110 WVDTDNKTINFITELFTSGTLREYRKK--HRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNL-GEVK 186 (632)
T ss_pred eecCCCceeeeeeecccCCcHHHHHHH--hccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCc-Ccee
Confidence 987664 888899998 599999984 445778889999999999999999975 99999999999999875 3899
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~ag 392 (1566)
|.|+|||+.... .+...++|||.|||||+.. ..|++.+|+|+.|-- +|++.++
T Consensus 187 IGDLGLAtl~r~-------------s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMC-------mLEMvT~ 239 (632)
T KOG0584|consen 187 IGDLGLATLLRK-------------SHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMC-------MLEMVTS 239 (632)
T ss_pred ecchhHHHHhhc-------------cccceeccCccccChHHHh-hhcchhhhhhhhhHH-------HHHHHhc
Confidence 999999986552 1334578999999999988 689999999999933 6777665
No 242
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.86 E-value=3e-23 Score=239.07 Aligned_cols=196 Identities=19% Similarity=0.200 Sum_probs=157.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||+|.+ .++..+|+|.+..... ...++. +|+.++++++||||++++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~-------~~~~~v~iK~~~~~~~---~~~~~~--------~e~~~l~~l~h~~i~~~~ 67 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLW-------NNTTPVAVKTLKPGTM---DPKDFL--------AEAQIMKKLRHPKLIQLY 67 (261)
T ss_pred hheeeEEEecccCCccEEEEEe-------cCCeEEEEEeeCCCcc---cHHHHH--------HHHHHHHHCCCCCcccee
Confidence 5799999999999999998874 3456799999875432 223344 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++...+..|+||||+++ +|.+++.......++...+..++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~~l~ 145 (261)
T cd05068 68 AVCTLEEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENN--ICKVA 145 (261)
T ss_pred EEEecCCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCC--CEEEC
Confidence 999999999999999965 999999754444578888999999999999999999999999999999999998 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
|||+++....... .. ..+...+..|+|||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 146 dfg~~~~~~~~~~-----~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~-------l~el~t~g~~ 203 (261)
T cd05068 146 DFGLARVIKEDIY-----EA-----REGAKFPIKWTAPEAALYNRFSIKSDVWSFGIL-------LTEIVTYGRM 203 (261)
T ss_pred CcceEEEccCCcc-----cc-----cCCCcCceeccCccccccCCCCchhhHHHHHHH-------HHHHHhcCCC
Confidence 9999986542100 00 011123457999999988888999999999987 556665 554
No 243
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.86 E-value=1.5e-23 Score=241.90 Aligned_cols=200 Identities=19% Similarity=0.160 Sum_probs=161.4
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
++|++.+.||+|+||.||+|++. .++..+|||.+....... .....+. +|+.+++.++||||+++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 67 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCL------LDRKPVALKKVQIFEMMDAKARQDCV--------KEIDLLKQLNHPNVIKY 67 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEe------CCCCEEEEEEeeccccCCHHHHHHHH--------HHHHHHHhCCCcceeee
Confidence 57999999999999999998863 467899999876532222 2222333 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++++.+.+..++||||+++ +|.+++... ....+++..+..++.|++.||.|||++||+||||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~--~~ 145 (267)
T cd08228 68 LDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATG--VV 145 (267)
T ss_pred eeeEEECCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCC--CE
Confidence 9999999999999999996 999888632 223478888999999999999999999999999999999999988 69
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|+|||+++....... ......+++.|+|||.+.+..++...|.|+.|++ .+..++|+.+
T Consensus 146 ~l~d~g~~~~~~~~~~-----------~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~-------l~el~~g~~p 205 (267)
T cd08228 146 KLGDLGLGRFFSSKTT-----------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCL-------LYEMAALQSP 205 (267)
T ss_pred EECccccceeccchhH-----------HHhcCCCCccccChhhhccCCCCchhhHHHHHHH-------HHHHhcCCCC
Confidence 9999999886432100 0112247788999999988888889999999987 6677777653
No 244
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.86 E-value=2e-23 Score=241.02 Aligned_cols=198 Identities=18% Similarity=0.193 Sum_probs=159.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|++.+.||+|+||.||+|.++ ..+..+|+|.+.... ....++. +|+++++.++||||++++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~------~~~~~~~~K~~~~~~---~~~~~~~--------~e~~~l~~l~h~~i~~~~ 68 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWK------KYSLTVAVKTLKEDT---MEVEEFL--------KEAAVMKEIKHPNLVQLL 68 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEe------cCCceEEEEEecCCc---hHHHHHH--------HHHHHHHhCCCCChhheE
Confidence 46889999999999999998853 467889999876432 2223444 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++..++.+++||||+++ +|.+++.......++...++.++.|++.||.|||++|++||||||+||++++++ .+||+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~--~~kl~ 146 (263)
T cd05052 69 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--LVKVA 146 (263)
T ss_pred EEEcCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC--cEEeC
Confidence 999999999999999986 999999754445578888899999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-cccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs~ 395 (1566)
|||+++......... .....++..|+|||.+.+..++...|+|+.|++ .+..++ |+.+
T Consensus 147 df~~~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i-------l~el~t~g~~p 205 (263)
T cd05052 147 DFGLSRLMTGDTYTA----------HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVL-------LWEIATYGMSP 205 (263)
T ss_pred CCccccccccceeec----------cCCCCCccccCCHHHhccCCCCchhHHHHHHHH-------HHHHHcCCCCC
Confidence 999998644211000 011123567999999988888999999999987 666665 5543
No 245
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.86 E-value=3.7e-23 Score=242.35 Aligned_cols=199 Identities=22% Similarity=0.277 Sum_probs=157.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||.||+|.+. .++..+|+|.+..... ......+. +|+.+|+.++|+||+++
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~ni~~~ 68 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISR------INGQLVALKVISMKTE-EGVPFTAI--------REASLLKGLKHANIVLL 68 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEc------CCCcEEEEEEecccCc-CCCcHHHH--------HHHHHHHhcCCCCEeEE
Confidence 467999999999999999998753 4678899999865422 11112223 58999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++++...+..|+||||++++|.+.+... ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~--~~~l~ 145 (291)
T cd07870 69 HDIIHTKETLTFVFEYMHTDLAQYMIQH-PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLG--ELKLA 145 (291)
T ss_pred EEEEecCCeEEEEEecccCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCC--cEEEe
Confidence 9999999999999999998888777532 23467778889999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... . .....+++.|+|||++.+ ..++...|+|+.|++ .+..++|+.+
T Consensus 146 Dfg~~~~~~~~~~-----~------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~-------l~~l~~g~~~ 203 (291)
T cd07870 146 DFGLARAKSIPSQ-----T------YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCI-------FIEMLQGQPA 203 (291)
T ss_pred ccccccccCCCCC-----C------CCCccccccccCCceeecCCCCCcHHHHHHHHHH-------HHHHHhCCCC
Confidence 9999975331100 0 011236788999998865 357788999999987 6777777653
No 246
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.86 E-value=2.2e-23 Score=247.37 Aligned_cols=210 Identities=21% Similarity=0.222 Sum_probs=166.1
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+|++.+.||+|+||.||+|.+. .++..+|+|.+.+...... ....+. +|+++++.++||||++++
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~ 67 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLK------GTGKLFALKVLDKKEMIKRNKVKRVL--------TEQEILATLDHPFLPTLY 67 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEc------CCCcEEEEEEEeccccchHHHHHHHH--------HHHHHHHhCCCCCchhhe
Confidence 6899999999999999998863 3688999999886543321 222233 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+......|+||||+.+ +|.+++...+...+++..++.++.|++.||.|||++|++||||||+||+++.++ .++|+
T Consensus 68 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~~l~ 145 (316)
T cd05574 68 ASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESG--HIMLS 145 (316)
T ss_pred eeeecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCC--CEEEe
Confidence 999999999999999987 999999755556688999999999999999999999999999999999999988 69999
Q ss_pred CcCCCCccccccccCCCC---C---------------CceeeeecCCcccccccccccccccchhhccccccccccCCch
Q 000399 321 DKPLVGFNSIADWCTIPT---S---------------PMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 382 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~---~---------------~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfe 382 (1566)
|||++............. . .........+.|+..|+|||++.+..++..+|+|+.|++
T Consensus 146 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~l---- 221 (316)
T cd05574 146 DFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGIL---- 221 (316)
T ss_pred ecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHH----
Confidence 999987543211100000 0 000001224568889999999988888999999999987
Q ss_pred hhhHHHhhccccc
Q 000399 383 YLLFLNKLAGRRW 395 (1566)
Q Consensus 383 yL~~ln~~agrs~ 395 (1566)
.+..+.|+.+
T Consensus 222 ---l~~l~~g~~p 231 (316)
T cd05574 222 ---LYEMLYGTTP 231 (316)
T ss_pred ---HHHHhhCCCC
Confidence 6667777754
No 247
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.86 E-value=1.2e-23 Score=241.99 Aligned_cols=196 Identities=17% Similarity=0.180 Sum_probs=156.7
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.. ..+..+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~~~lg~G~~~~vy~~~~-------~~~~~~aik~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~ 64 (256)
T cd05113 3 PKDLTFLKELGTGQFGVVKYGKW-------RGQYDVAIKMIKEGSMS---EDEFI--------EEAKVMMKLSHEKLVQL 64 (256)
T ss_pred hHHeEEeeEecCcccceEEEEEe-------cCCCcEEEEEcCCCccc---HHHHH--------HHHHHHhcCCCCCeeeE
Confidence 35799999999999999998764 23456999987653221 22344 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++...+.+|+||||+++ +|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||
T Consensus 65 ~~~~~~~~~~~lv~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~--~~kl 141 (256)
T cd05113 65 YGVCTKQRPIYIVTEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQG--CVKV 141 (256)
T ss_pred EEEEccCCCcEEEEEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC--CEEE
Confidence 9999998999999999986 9999997432 2578888999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
+|||+++........ ...+..++..|++||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 142 ~d~g~~~~~~~~~~~----------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~-------l~~l~~~g~~ 200 (256)
T cd05113 142 SDFGLSRYVLDDEYT----------SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVL-------MWEVYSLGKM 200 (256)
T ss_pred CCCccceecCCCcee----------ecCCCccChhhCCHHHHhcCcccchhHHHHHHHH-------HHHHhcCCCC
Confidence 999998854321000 0112235567999999988888999999999987 555565 554
No 248
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.86 E-value=2.1e-23 Score=247.13 Aligned_cols=193 Identities=17% Similarity=0.199 Sum_probs=159.3
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||++.+. .++..+|+|.+.... ......++. +|++++++++||||+++++
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~ 66 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHR------PSGLIMARKLIHLEI-KPAIRNQII--------RELKVLHECNSPYIVGFYG 66 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEc------CCCeEEEEEEecccc-CHHHHHHHH--------HHHHHHHhCCCCCCCeEEE
Confidence 6899999999999999998763 467889999876431 111122233 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhhhhhc
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++.+++.+|+||||+++ +|.++++. .+.+++..++.++.|++.||.|||+ .+++||||||+|||++.++ .+||+
T Consensus 67 ~~~~~~~~~lv~ey~~~~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~--~~~l~ 142 (308)
T cd06615 67 AFYSDGEISICMEHMDGGSLDQVLKK--AGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRG--EIKLC 142 (308)
T ss_pred EEeeCCEEEEEeeccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCC--cEEEc
Confidence 99999999999999997 99999974 3557888899999999999999998 6999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|||+++..... ......++..|+|||.+.+..++...|+|+.|++ .+..+.|+.
T Consensus 143 dfg~~~~~~~~-------------~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~-------l~~l~~g~~ 196 (308)
T cd06615 143 DFGVSGQLIDS-------------MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLS-------LVEMAIGRY 196 (308)
T ss_pred cCCCccccccc-------------ccccCCCCcCccChhHhcCCCCCccchHHHHHHH-------HHHHHhCCC
Confidence 99998754310 0112347889999999988888889999999987 677777764
No 249
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.86 E-value=3e-22 Score=227.34 Aligned_cols=255 Identities=16% Similarity=0.182 Sum_probs=204.5
Q ss_pred ccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee---eehhhhhccCcceeeeecCcceEEEeeccCCCcccc
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1354 (1566)
Q Consensus 1280 ~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~---~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~t 1354 (1566)
..|.+.|.. |-++... |+|||.|..|++|++.+. ...++.|-.+.|+++.|.+++..+++++. |++
T Consensus 172 d~h~gev~~v~~l~~sdt-----latgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~----d~~ 242 (459)
T KOG0288|consen 172 DAHEGEVHDVEFLRNSDT-----LATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASN----DKN 242 (459)
T ss_pred hccccccceeEEccCcch-----hhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecC----CCc
Confidence 346566654 4444333 999999999999999875 56788999999999999999999999998 999
Q ss_pred eeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeeccc--------ccccccCCCCC
Q 000399 1355 VQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQS--------MDSLHGGSPSS 1424 (1566)
Q Consensus 1355 VrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~--------~~~~~~~~~~~ 1424 (1566)
+++|++.+.+...++.||++.|+++.|.-....++|| |.+||+||+..+.|.+++-.-+ ...+..+..+.
T Consensus 243 ~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~~S~cnDI~~~~~~~~SgH~Dk 322 (459)
T KOG0288|consen 243 LRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLPGSQCNDIVCSISDVISGHFDK 322 (459)
T ss_pred eeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccccccccceEecceeeeeccccc
Confidence 9999999999999999999999999998877778887 9999999999999887753211 11223344555
Q ss_pred cccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhH
Q 000399 1425 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLV 1504 (1566)
Q Consensus 1425 ~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V 1504 (1566)
.+..|+.............+.|.++..+++ |..+++++.|.++.++|+++....+++......-+ +-
T Consensus 323 kvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~----------g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~a--sD- 389 (459)
T KOG0288|consen 323 KVRFWDIRSADKTRSVPLGGRVTSLDLSMD----------GLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCA--SD- 389 (459)
T ss_pred ceEEEeccCCceeeEeecCcceeeEeeccC----------CeEEeeecCCCceeeeecccccEEEEeeccccccc--cc-
Confidence 667777766666665555667888877776 88999999999999999999999988886633211 11
Q ss_pred HHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCce--eeEeeeeccC
Q 000399 1505 SAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGY--VTKVRIISKR 1566 (1566)
Q Consensus 1505 ~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~--V~~VafspdG 1566 (1566)
+....|||++.++|+||.||.|+||++.+|++...+...... |++++|+|.|
T Consensus 390 ----------wtrvvfSpd~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG 443 (459)
T KOG0288|consen 390 ----------WTRVVFSPDGSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSG 443 (459)
T ss_pred ----------cceeEECCCCceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCC
Confidence 334456788899999999999999999999999988755544 9999999976
No 250
>PTZ00421 coronin; Provisional
Probab=99.86 E-value=5.7e-22 Score=246.68 Aligned_cols=223 Identities=12% Similarity=0.091 Sum_probs=173.2
Q ss_pred cccCCCceec--cCC-CCCCCCCcccccccCccCCCCceEeee--------eehhhhhccCcceeeeecCcc-eEEEeec
Q 000399 1279 LMKCEPWFWF--PTP-AASWDGPDFLGRVGGLKDESPWKIKAS--------ILSSIRAHHGALRSVAVGQDE-CTVFTAG 1346 (1566)
Q Consensus 1279 ~~~H~~~V~~--fSp-dg~~~~~~~LaSgS~D~~I~vWdl~~~--------~l~tl~gH~~~V~slafspd~-~~LaSgS 1346 (1566)
...|++.|++ |+| ++.+ |++||.|++|++||+..+ .+..+.+|...|.+++|+|++ .+|+|||
T Consensus 71 l~GH~~~V~~v~fsP~d~~~-----LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs 145 (493)
T PTZ00421 71 LLGQEGPIIDVAFNPFDPQK-----LFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAG 145 (493)
T ss_pred EeCCCCCEEEEEEcCCCCCE-----EEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEe
Confidence 4569999998 888 7777 999999999999998753 356788999999999999975 6899999
Q ss_pred cCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCC
Q 000399 1347 IGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSS 1424 (1566)
Q Consensus 1347 ~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~ 1424 (1566)
. |++|+|||+.+++++..+.+|.+.|++++|++++..++++ |++|+|||+++++.+.++.+|...
T Consensus 146 ~----DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~--------- 212 (493)
T PTZ00421 146 A----DMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASA--------- 212 (493)
T ss_pred C----CCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCC---------
Confidence 8 9999999999999999999999999999999999999876 999999999999998888765321
Q ss_pred cccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEe----cCceEEEEEccCCc-eeeeeccCCcccC
Q 000399 1425 SISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGI----GNGSLRFIDINQGQ-KLHLWRGEPTELG 1499 (1566)
Q Consensus 1425 ~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs----~DgtIrlWDi~tg~-~l~~~~~h~~~v~ 1499 (1566)
.+..+.|.++ +..+++++ .|++|++||+++.. .+.....+.
T Consensus 213 --------------------~~~~~~w~~~----------~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~---- 258 (493)
T PTZ00421 213 --------------------KSQRCLWAKR----------KDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQ---- 258 (493)
T ss_pred --------------------cceEEEEcCC----------CCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCC----
Confidence 1123445554 44555543 58999999999764 333332221
Q ss_pred chhhHHHhhccCCCcccCCCcccchhHHHhcc-CCCceeEEeeccCceeEEeec-cCceeeEeeeecc
Q 000399 1500 FPSLVSAICACGSEKMQAGGAVASPSWIAAGL-SSGQCRLFDVRSGNVIASWRA-HDGYVTKVRIISK 1565 (1566)
Q Consensus 1500 ~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs-~Dg~I~lWD~~sgk~l~~l~g-H~~~V~~Vafspd 1565 (1566)
...+.. ..+++++.+|++|+ .|+.|++||+++++.+..+.. +..++.+++|.|.
T Consensus 259 -~~~~~~-----------~~~d~d~~~L~lggkgDg~Iriwdl~~~~~~~~~~~~s~~~~~g~~~~pk 314 (493)
T PTZ00421 259 -SSALFI-----------PFFDEDTNLLYIGSKGEGNIRCFELMNERLTFCSSYSSVEPHKGLCMMPK 314 (493)
T ss_pred -CCceEE-----------EEEcCCCCEEEEEEeCCCeEEEEEeeCCceEEEeeccCCCCCcceEeccc
Confidence 111111 22456777888777 599999999999998887654 4567889998885
No 251
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.86 E-value=2.6e-23 Score=246.05 Aligned_cols=204 Identities=17% Similarity=0.153 Sum_probs=158.6
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|.+.. ...+..+|+|.+...........+. ..+|+.+++.++||||+++++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~----~~~~~~~alK~~~~~~~~~~~~~~~-------~~~e~~~l~~l~h~~i~~~~~ 69 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKN----GKDGKEYAIKKFKGDKEQYTGISQS-------ACREIALLRELKHENVVSLVE 69 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecC----CCCCCeEEEEEeccccccccCccHH-------HHHHHHHHHhcCCCCccceEE
Confidence 48899999999999999988631 1268899999988743222211111 126999999999999999999
Q ss_pred ccccc--CceeeeccCCccchhhhhccCc---ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc----cc
Q 000399 243 LLKTS--GLITSVIPKTPYTLENILQFSP---NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD----SC 313 (1566)
Q Consensus 243 ~~~~~--~~l~LV~E~~~gsL~~~l~~~~---~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~----~~ 313 (1566)
++... ..+|+||||++++|.+++.+.. ...+++..++.++.||+.||.|||+++|+||||||+||+++. ++
T Consensus 70 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~ 149 (316)
T cd07842 70 VFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERG 149 (316)
T ss_pred EEeCCCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccc
Confidence 99888 7899999999998888775422 235788899999999999999999999999999999999998 66
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~ag 392 (1566)
.+||+|||+++......... .....+.++..|+|||++.+ ..++...|+|+.|++ .+..++|
T Consensus 150 --~~kl~Dfg~~~~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~-------l~~l~~~ 212 (316)
T cd07842 150 --VVKIGDLGLARLFNAPLKPL--------ADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCI-------FAELLTL 212 (316)
T ss_pred --eEEECCCccccccCCCcccc--------cccCCccccccccCHHHHhCCCCCCcHHHHHHHHHH-------HHHHHhc
Confidence 79999999998654211100 01123457888999998765 457889999999987 5666667
Q ss_pred cc
Q 000399 393 RR 394 (1566)
Q Consensus 393 rs 394 (1566)
+.
T Consensus 213 ~~ 214 (316)
T cd07842 213 EP 214 (316)
T ss_pred CC
Confidence 64
No 252
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.86 E-value=3.1e-23 Score=237.44 Aligned_cols=184 Identities=16% Similarity=0.111 Sum_probs=146.2
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||.||+|+++ .++..+|+|.+.... .......+. +|+++++.++||||+++++++...
T Consensus 1 ~~lg~g~~g~vy~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~ 65 (252)
T cd05084 1 ERIGRGNFGEVFSGRLR------ADNTPVAVKSCRETL-PPDLKAKFL--------QEARILKQYSHPNIVRLIGVCTQK 65 (252)
T ss_pred CccCcccCccEEEEEEe------cCCceEEEEecCccC-CHHHHHHHH--------HHHHHHHhCCCCCcceEEEEEcCC
Confidence 46999999999998863 468889999876432 222222333 599999999999999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCC
Q 000399 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~ 326 (1566)
...|+||||+++ +|.+++... ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+|||+++
T Consensus 66 ~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~--~~kl~dfg~~~ 142 (252)
T cd05084 66 QPIYIVMELVQGGDFLTFLRTE-GPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKN--VLKISDFGMSR 142 (252)
T ss_pred CCeEEEEeeccCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCC--cEEECccccCc
Confidence 999999999987 999998732 33478888999999999999999999999999999999999988 79999999987
Q ss_pred ccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
.......... ...-..+..|+|||.+.+..++...|+|+.|++
T Consensus 143 ~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 185 (252)
T cd05084 143 EEEDGVYAST---------GGMKQIPVKWTAPEALNYGRYSSESDVWSFGIL 185 (252)
T ss_pred cccccccccc---------CCCCCCceeecCchhhcCCCCChHHHHHHHHHH
Confidence 5331100000 000012346999999988888999999999987
No 253
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.86 E-value=2.9e-23 Score=239.88 Aligned_cols=196 Identities=15% Similarity=0.147 Sum_probs=157.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|++. .++..+|+|++..... .....+. +|+.+++.++||||+++
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~~aik~~~~~~~--~~~~~~~--------~e~~~l~~~~h~~ii~~ 71 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNL------HTGELAAVKIIKLEPG--DDFSLIQ--------QEIFMVKECKHCNIVAY 71 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEEC------CCCeEEEEEEEecCcc--chHHHHH--------HHHHHHHhcCCCCeeee
Confidence 457999999999999999998853 4678899999864321 1112222 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++...+.+|+||||+++ +|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 72 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~--~~~l 147 (267)
T cd06646 72 FGSYLSREKLWICMEYCGGGSLQDIYHV--TGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNG--DVKL 147 (267)
T ss_pred eEEEEeCCEEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--CEEE
Confidence 9999999999999999996 99998863 34578889999999999999999999999999999999999988 6999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc---ccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+|||+++...... . ......++..|+|||.+. ...++...|+|+.|++ .+..+.|+.
T Consensus 148 ~dfg~~~~~~~~~------~-----~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~i-------l~el~~g~~ 207 (267)
T cd06646 148 ADFGVAAKITATI------A-----KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGIT-------AIELAELQP 207 (267)
T ss_pred CcCccceeecccc------c-----ccCccccCccccCHhHcccccCCCCcchhhHHHHHHH-------HHHHHhCCC
Confidence 9999998543110 0 011234778899999874 3446778999999987 566666664
No 254
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.86 E-value=2.7e-23 Score=238.84 Aligned_cols=186 Identities=19% Similarity=0.217 Sum_probs=150.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|++.+.||+|+||.||+|++ ..+..+|+|.+.+.... ..++. +|+.+++.++||||++++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~-------~~~~~~~iK~~~~~~~~---~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKW-------RGKIDVAIKMIREGAMS---EDDFI--------EEAKVMMKLSHPNLVQLY 65 (256)
T ss_pred HHcchhhhhccCCCceEEEeEe-------cCCccEEEEEeccCCCC---HHHHH--------HHHHHHHhCCCCCEEEEE
Confidence 4689999999999999998874 24567899987653222 12344 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++...+..|+||||+++ +|.+++...+ ..+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 66 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~kl~ 142 (256)
T cd05059 66 GVCTKQRPIFIVTEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDN--VVKVS 142 (256)
T ss_pred EEEcCCCceEEEEecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCC--cEEEC
Confidence 999999999999999986 9999987432 3578888899999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||+++........ ...+..++..|+|||++.+..++...|+|+.|++
T Consensus 143 dfg~~~~~~~~~~~----------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i 190 (256)
T cd05059 143 DFGLARYVLDDQYT----------SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVL 190 (256)
T ss_pred Ccccceeccccccc----------ccCCCCCCccccCHHHhccCCCCchhhHHHHHHH
Confidence 99999854321000 0011123456999999988889999999999987
No 255
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.86 E-value=1.8e-23 Score=241.24 Aligned_cols=206 Identities=15% Similarity=0.127 Sum_probs=160.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|+..+.||+|+||.||++.+. .++..+|+|.+...........+... ...+|+.+++.++||||+++++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~------~~~~~~alk~~~~~~~~~~~~~~~~~----~~~~e~~~l~~l~h~~iv~~~~ 70 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDV------KTGTLMAVKQVTYVRNTSSEQEEVVE----ALRKEIRLMARLNHPHIIRMLG 70 (268)
T ss_pred CccccceecCcCceEEEEEEEc------CCCcEEEEEEeecccCCchhHHHHHH----HHHHHHHHHHHcCCCceehhhc
Confidence 4788899999999999988752 56888999998754322211111111 1126999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+.+..++||||+++ +|.+++.. .+.+++..++.++.||+.||.|||++|++||||||+||+++.++. .+||+|
T Consensus 71 ~~~~~~~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~-~~~l~d 147 (268)
T cd06630 71 ATCEDSHFNLFVEWMAGGSVSHLLSK--YGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQ-RLRIAD 147 (268)
T ss_pred eeccCCeEEEEEeccCCCcHHHHHHH--hCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEEcc
Confidence 99999999999999997 99999973 345788889999999999999999999999999999999987652 589999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||.++........ .........++..|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 148 fg~~~~~~~~~~~-------~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~-------l~~l~~g~~p 207 (268)
T cd06630 148 FGAAARLAAKGTG-------AGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCV-------IIEMATAKPP 207 (268)
T ss_pred ccccccccccccc-------CCccccccccccceeCHhHhccCCCCcccchHHHHHH-------HHHHHhCCCC
Confidence 9998865421100 0001122347888999999988888899999999987 5566667643
No 256
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.86 E-value=3.1e-23 Score=239.52 Aligned_cols=202 Identities=15% Similarity=0.115 Sum_probs=158.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccc--cchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES--KNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~--~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
.+|++.+.||+|+||.||+|.+. .++..+|+|.+.......... .+.+. +|+.+++.++||||++
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~------~~~~~v~ik~~~~~~~~~~~~~~~~~~~-------~E~~~l~~l~h~~i~~ 68 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDA------DTGRELAVKQVQFDPESPETSKEVNALE-------CEIQLLKNLLHERIVQ 68 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEc------CCCcEEEEEEeecCcCCcccHHHHHHHH-------HHHHHHHhcCCCCeee
Confidence 46899999999999999988753 568899999886432221111 12222 6999999999999999
Q ss_pred cccccccc--CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 240 VLGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 240 l~~~~~~~--~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
+++++.+. ..+++||||+++ +|.+++.. ...+++..++.++.|++.||.|||+++|+||||||+||+++.++ .
T Consensus 69 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~--~ 144 (265)
T cd06652 69 YYGCLRDPMERTLSIFMEHMPGGSIKDQLKS--YGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVG--N 144 (265)
T ss_pred EEeEeccCCCceEEEEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCC--C
Confidence 99998764 468899999986 99999873 34467888899999999999999999999999999999999988 7
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+||+|||+++.......... . .....++..|+|||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 145 ~~l~Dfg~~~~~~~~~~~~~--~------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i-------l~el~~g~~p 208 (265)
T cd06652 145 VKLGDFGASKRLQTICLSGT--G------MKSVTGTPYWMSPEVISGEGYGRKADIWSVGCT-------VVEMLTEKPP 208 (265)
T ss_pred EEECcCcccccccccccccc--c------cccCCCCccccChhhhcCCCCCcchhHHHHHHH-------HHHHhhCCCC
Confidence 99999999985432111000 0 112237788999999988888889999999987 6667777654
No 257
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.86 E-value=2.4e-23 Score=244.05 Aligned_cols=197 Identities=16% Similarity=0.188 Sum_probs=153.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||++..... ........+|+|.+..... .+...++. +|+.+++.+ +||||++
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~-~~~~~~~~~a~k~~~~~~~-~~~~~~~~--------~E~~~l~~l~~h~~i~~ 80 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGL-DNPNETSTVAVKMLKDDAT-EKDLSDLV--------SEMEMMKMIGKHKNIIN 80 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecC-CCCCCceeEEEEEccCCCC-HHHHHHHH--------HHHHHHHhhcCCCCeee
Confidence 35799999999999999998775210 1113457889998875422 22223333 599999999 7999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccC--------------cccccchhHHHHHHHHHHHHHHHHhhccccCCCccC
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFS--------------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 304 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~--------------~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp 304 (1566)
+++++..++.+++||||+++ +|.+++... ....++...++.++.|++.||.|||++||+||||||
T Consensus 81 ~~~~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp 160 (293)
T cd05053 81 LLGVCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAA 160 (293)
T ss_pred EEEEEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccce
Confidence 99999999999999999986 999998631 234577888899999999999999999999999999
Q ss_pred CCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 305 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 305 ~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
+||+++.++ .+||+|||+++.......... ...-.++..|+|||++.+..++...|+|+.|+|
T Consensus 161 ~Nil~~~~~--~~kL~Dfg~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 223 (293)
T cd05053 161 RNVLVTEDH--VMKIADFGLARDIHHIDYYRK---------TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 223 (293)
T ss_pred eeEEEcCCC--eEEeCccccccccccccceec---------cCCCCCCccccCHHHhccCCcCcccceeehhhH
Confidence 999999988 799999999986542111000 001124556999999988888999999999988
No 258
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.86 E-value=7.1e-22 Score=229.57 Aligned_cols=262 Identities=15% Similarity=0.251 Sum_probs=188.6
Q ss_pred ccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhh---hccCcceeeeecCcceEEEeeccCCCc
Q 000399 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIR---AHHGALRSVAVGQDECTVFTAGIGPGF 1351 (1566)
Q Consensus 1278 ~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~---gH~~~V~slafspd~~~LaSgS~~~~~ 1351 (1566)
+...|...|.+ |||||.+ ++|.|.||+|.+||-+++ .+..+. +|.+.|.+++|+||++.|+|+|.
T Consensus 185 s~r~HskFV~~VRysPDG~~-----Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~Sa---- 255 (603)
T KOG0318|consen 185 SFREHSKFVNCVRYSPDGSR-----FATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSA---- 255 (603)
T ss_pred cccccccceeeEEECCCCCe-----EEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecC----
Confidence 45568899999 8999998 999999999999998876 566665 99999999999999999999999
Q ss_pred ccceeeEEeccccc-------------------------------------------ccccccccccccceEEeecCCce
Q 000399 1352 KGTVQKWELTRINC-------------------------------------------VSGYYGHEEVVNDICVLSSSGRI 1388 (1566)
Q Consensus 1352 D~tVrlWDl~tg~~-------------------------------------------i~tl~gH~~~V~sVafsp~g~~L 1388 (1566)
|+++||||+.+.++ ..++.||...|++++.++++.+|
T Consensus 256 Dkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i 335 (603)
T KOG0318|consen 256 DKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTI 335 (603)
T ss_pred CceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEE
Confidence 99999999964433 34458999999999999999999
Q ss_pred eec--cCcEEEeecCCCcEEEEe-eccccc----------ccccCCCCCcccccccCCCCC-----CCC-----------
Q 000399 1389 ASC--DGTLHVWNSQTGKLLSVF-AEQSMD----------SLHGGSPSSSISKINTDQVGM-----LNS----------- 1439 (1566)
Q Consensus 1389 aSg--DgtIkLWDl~tg~~l~~l-~~h~~~----------~~~~~~~~~~~~~~~~~~~~~-----~~~----------- 1439 (1566)
.|| ||.|.-||..+|..-+.. +.|... .+.+.+.+..+...+...... +.+
T Consensus 336 ~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~ 415 (603)
T KOG0318|consen 336 YSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLS 415 (603)
T ss_pred EeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcC
Confidence 887 999999999877654322 222211 122222222222221100000 000
Q ss_pred ----------------ccccc-ccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchh
Q 000399 1440 ----------------NTLSS-GILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1502 (1566)
Q Consensus 1440 ----------------~~~~~-~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~ 1502 (1566)
.+++. ....+.|.+ ++++++|++..++.|+.|+.|++|.+..+....... ...|.+
T Consensus 416 d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~---s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~----~~~h~a 488 (603)
T KOG0318|consen 416 DGGTAVVACISDIVLLQDQTKVSSIPIGYES---SAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAK----LLEHRA 488 (603)
T ss_pred CCCEEEEEecCcEEEEecCCcceeecccccc---ceEEEcCCCCEEEEecccceEEEEEecCCcccceee----eecccC
Confidence 00000 011123332 466778889999999999999999998655332211 113566
Q ss_pred hHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCce-eEEeeccCceeeEeeeeccC
Q 000399 1503 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNV-IASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1503 ~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~-l~~l~gH~~~V~~VafspdG 1566 (1566)
.|++|+++ ||+.+||+|...+.+.+||+.+++. ...|.=|...|.+|+|+|+.
T Consensus 489 ~iT~vayS-----------pd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n 542 (603)
T KOG0318|consen 489 AITDVAYS-----------PDGAYLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNN 542 (603)
T ss_pred CceEEEEC-----------CCCcEEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCc
Confidence 77777775 6668999999999999999998876 33466699999999999973
No 259
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.86 E-value=2e-23 Score=241.20 Aligned_cols=196 Identities=15% Similarity=0.162 Sum_probs=158.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|++. .++..+|+|.+..... .....+. +|+.+++.++||||+++
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~--~~~~~~~--------~e~~~~~~l~h~~ii~~ 71 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNV------NTGELAAIKVIKLEPG--EDFAVVQ--------QEIIMMKDCKHSNIVAY 71 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEc------CCCcEEEEEEEecCch--hHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 458999999999999999998753 5688899999865321 1112222 58899999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+...+.+|+||||+++ +|.+++.. .+.+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 72 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~--~~~l 147 (267)
T cd06645 72 FGSYLRRDKLWICMEFCGGGSLQDIYHV--TGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNG--HVKL 147 (267)
T ss_pred EEEEEeCCEEEEEEeccCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEE
Confidence 9999999999999999997 99999873 44688999999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc---ccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+|||++...... .. ......|+..|+|||++. ...++..+|+|+.|++ .+..+.|+.
T Consensus 148 ~dfg~~~~~~~~----~~-------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~i-------l~~l~~~~~ 207 (267)
T cd06645 148 ADFGVSAQITAT----IA-------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGIT-------AIELAELQP 207 (267)
T ss_pred CcceeeeEccCc----cc-------ccccccCcccccChhhhccccCCCCCchhhhHHHHHH-------HHHHhcCCC
Confidence 999998754310 00 011234788999999874 4457789999999987 555666654
No 260
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.86 E-value=4.5e-23 Score=240.28 Aligned_cols=197 Identities=18% Similarity=0.251 Sum_probs=157.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||+|+++ .++..+|+|++..........+.+. +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~~ 66 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNR------ETGQIVAIKKFVESEDDPVIKKIAL--------REIRMLKQLKHPNLVNLI 66 (286)
T ss_pred CceeeeeeecccCCeEEEEEEEC------CCCcEEEEEEEeecccCccccHHHH--------HHHHHHHhCCCCCEeeee
Confidence 36999999999999999998863 4688999999875432222222233 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++......++||||+++ +|..++.. ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+
T Consensus 67 ~~~~~~~~~~~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~--~~~l~ 142 (286)
T cd07847 67 EVFRRKRKLHLVFEYCDHTVLNELEKN--PRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQG--QIKLC 142 (286)
T ss_pred eEEeeCCEEEEEEeccCccHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCC--cEEEC
Confidence 999999999999999998 66666542 33478889999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|||++......... .....++..|+|||++.+ ..++...|+|+.|++ .+..+.|+.
T Consensus 143 dfg~~~~~~~~~~~-----------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i-------~~~l~~g~~ 199 (286)
T cd07847 143 DFGFARILTGPGDD-----------YTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCV-------FAELLTGQP 199 (286)
T ss_pred ccccceecCCCccc-----------ccCcccccccCCHHHHhCCCCcCchhhhHHHHHH-------HHHHHhCCC
Confidence 99999865421100 011236778999998865 457789999999987 677777764
No 261
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.86 E-value=1.8e-23 Score=241.90 Aligned_cols=194 Identities=16% Similarity=0.195 Sum_probs=152.7
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|++.+.||+|+||.||+|.++. ....+..+|+|.+..... ......+. +|+.+++.++||||++++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~---~~~~~~~~~ik~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 71 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKL---PGKREIPVAIKTLKAGYT-EKQRRDFL--------SEASIMGQFDHPNIIHLE 71 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEec---CCCCceEEEEEECCCCCC-HHHHHHHH--------HHHHHHHhCCCCCcceEE
Confidence 579999999999999999887521 112345789998765321 22223333 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+++..|+||||+++ +|.+++... .+.++...+..++.|++.||.|||++|++||||||+|||++.++ .+||+
T Consensus 72 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~--~~~l~ 148 (267)
T cd05066 72 GVVTKSKPVMIVTEYMENGSLDAFLRKH-DGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNL--VCKVS 148 (267)
T ss_pred EEEecCCccEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCC--eEEeC
Confidence 999999999999999986 999999743 34578888899999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||+++........ . . ....-.++..|+|||.+.+..++...|.|+.|++
T Consensus 149 dfg~~~~~~~~~~~----~-~---~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~ 198 (267)
T cd05066 149 DFGLSRVLEDDPEA----A-Y---TTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 198 (267)
T ss_pred CCCcccccccccce----e-e---ecCCCccceeecCHhHhccCccCchhhhHHHHHH
Confidence 99999865421100 0 0 0011113457999999998889999999999987
No 262
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.86 E-value=3.8e-23 Score=242.64 Aligned_cols=201 Identities=17% Similarity=0.198 Sum_probs=158.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|++|.||+|.++ .++..+|+|.+............+. +|+.+++.++||||++++
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 67 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDR------VTNETIALKKIRLEQEDEGVPSTAI--------REISLLKEMQHGNIVRLQ 67 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEec------CCCcEEEEEehhhccccccchHHHH--------HHHHHHHhccCCCEeeEE
Confidence 57999999999999999998863 4678899999865432222222233 599999999999999999
Q ss_pred ccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 242 GLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
+++......|+||||++++|.+.+.......+++..++.++.||+.||.|||++||+||||||+||+++.++. .+||+|
T Consensus 68 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~-~~kl~d 146 (294)
T PLN00009 68 DVVHSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTN-ALKLAD 146 (294)
T ss_pred EEEecCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCC-EEEEcc
Confidence 9999999999999999989888886544444577788899999999999999999999999999999986442 689999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++....... ......+++.|+|||.+.+ ..++...|+|+.|++ .+..++|+.+
T Consensus 147 fg~~~~~~~~~~-----------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i-------~~~l~tg~~p 203 (294)
T PLN00009 147 FGLARAFGIPVR-----------TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCI-------FAEMVNQKPL 203 (294)
T ss_pred cccccccCCCcc-----------ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHH-------HHHHHhCCCC
Confidence 999975432100 0111236788999998765 457889999999987 6777777653
No 263
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.86 E-value=1.9e-23 Score=240.53 Aligned_cols=197 Identities=15% Similarity=0.164 Sum_probs=158.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|+++++||+|+||.||+|.. .++..+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~-------~~~~~~a~K~~~~~~~~---~~~~~--------~E~~~l~~l~h~~i~~~ 66 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYY-------NGHTKVAIKSLKQGSMS---PEAFL--------AEANLMKQLQHPRLVRL 66 (260)
T ss_pred hHHceeeeeeccCccceEEeeec-------CCCceEEEEEecCCCCc---HHHHH--------HHHHHHHhcCCcCeeeE
Confidence 35799999999999999999875 35678999998754332 22344 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++. .+..|+||||+++ +|.+++.......++...+..++.|++.||.|||+.|++||||||+||+++.++ .++|
T Consensus 67 ~~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~--~~~l 143 (260)
T cd05067 67 YAVVT-QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETL--CCKI 143 (260)
T ss_pred EEEEc-cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCC--CEEE
Confidence 99874 5678999999986 999998755555678888899999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-cccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs~ 395 (1566)
+|||+++........ ......++..|+|||.+....++...|+|+.|++ .+..++ |+.+
T Consensus 144 ~dfg~~~~~~~~~~~----------~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~-------l~el~~~g~~p 203 (260)
T cd05067 144 ADFGLARLIEDNEYT----------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGIL-------LTEIVTYGRIP 203 (260)
T ss_pred ccCcceeecCCCCcc----------cccCCcccccccCHHHhccCCcCcccchHHHHHH-------HHHHHhCCCCC
Confidence 999999754411000 1112235677999999988888889999999987 555565 6653
No 264
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.86 E-value=4.7e-23 Score=243.00 Aligned_cols=208 Identities=17% Similarity=0.172 Sum_probs=160.7
Q ss_pred chhhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCC
Q 000399 156 SCSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHP 235 (1566)
Q Consensus 156 ~~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~Hp 235 (1566)
......++|++.+.||+|+||.||+|.+. .++..+|+|.+............+ .+|+.+++.++||
T Consensus 6 ~~~~~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~aik~~~~~~~~~~~~~~~--------~~e~~~l~~l~h~ 71 (310)
T cd07865 6 PFCDEVSKYEKLAKIGQGTFGEVFKARHK------KTKQIVALKKVLMENEKEGFPITA--------LREIKILQLLKHE 71 (310)
T ss_pred cccchhhheEEEEEeecCCCEEEEEEEEC------CCCcEEEEEEEeccCCcCCchhHH--------HHHHHHHHhCCCC
Confidence 34556788999999999999999998863 468899999986543222111112 2589999999999
Q ss_pred CcccccccccccC--------ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCc
Q 000399 236 NVAPVLGLLKTSG--------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 307 (1566)
Q Consensus 236 NIV~l~~~~~~~~--------~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NI 307 (1566)
||+++++++.... ..++||||++++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||
T Consensus 72 ~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~ni 150 (310)
T cd07865 72 NVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANI 150 (310)
T ss_pred CccceEEEEecccccccCCCceEEEEEcCCCcCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHE
Confidence 9999999876543 45999999999998888642 33578999999999999999999999999999999999
Q ss_pred cccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhH
Q 000399 308 LLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLF 386 (1566)
Q Consensus 308 Ll~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ 386 (1566)
+++.++ .+||+|||+++......... . .......++..|+|||++.+. .++...|+|+.|++ .
T Consensus 151 l~~~~~--~~kl~dfg~~~~~~~~~~~~----~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~-------l 214 (310)
T cd07865 151 LITKDG--ILKLADFGLARAFSLSKNSK----P---NRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCI-------M 214 (310)
T ss_pred EECCCC--cEEECcCCCcccccCCcccC----C---CCccCcccCccccCcHHhcCCcccCchhhhHHHHHH-------H
Confidence 999988 79999999998654211110 0 011223467789999987653 46788999999987 5
Q ss_pred HHhhcccc
Q 000399 387 LNKLAGRR 394 (1566)
Q Consensus 387 ln~~agrs 394 (1566)
+..++|+.
T Consensus 215 ~el~t~~~ 222 (310)
T cd07865 215 AEMWTRSP 222 (310)
T ss_pred HHHHhCCC
Confidence 66667764
No 265
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.86 E-value=5.8e-22 Score=239.95 Aligned_cols=217 Identities=18% Similarity=0.274 Sum_probs=180.3
Q ss_pred ccCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccc
Q 000399 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV 1366 (1566)
Q Consensus 1288 ~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i 1366 (1566)
+|+|...| ++++-..|.|++||.+=+ ++..|..|.|+|+.++|+|+..+|+|||. |.+|+||+..+.+|+
T Consensus 16 sFHP~rPw-----ILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGD----DykIkVWnYk~rrcl 86 (1202)
T KOG0292|consen 16 SFHPKRPW-----ILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGD----DYKIKVWNYKTRRCL 86 (1202)
T ss_pred ecCCCCCE-----EEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCC----ccEEEEEecccceeh
Confidence 48999998 999999999999999866 78899999999999999999999999998 999999999999999
Q ss_pred cccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCccccc
Q 000399 1367 SGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSS 1444 (1566)
Q Consensus 1367 ~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1444 (1566)
.++.||-+.|..+.|++.-.+|+|+ |.||+|||.++++|+.++.+| ..
T Consensus 87 ftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGH------------------------------nH 136 (1202)
T KOG0292|consen 87 FTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGH------------------------------NH 136 (1202)
T ss_pred hhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecC------------------------------ce
Confidence 9999999999999999999999877 999999999999999999887 45
Q ss_pred ccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeecc--------CC---------c------ccCch
Q 000399 1445 GILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRG--------EP---------T------ELGFP 1501 (1566)
Q Consensus 1445 ~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~--------h~---------~------~v~~~ 1501 (1566)
.|.|..|+|. ...++++|-|.|||+||+.--+....-.+ +. + .-+|.
T Consensus 137 YVMcAqFhpt----------EDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHD 206 (1202)
T KOG0292|consen 137 YVMCAQFHPT----------EDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHD 206 (1202)
T ss_pred EEEeeccCCc----------cceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccc
Confidence 5778888886 67999999999999999963221111000 00 0 00223
Q ss_pred hhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCc--eeEEeeccCceeeEeeeec
Q 000399 1502 SLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN--VIASWRAHDGYVTKVRIIS 1564 (1566)
Q Consensus 1502 ~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk--~l~~l~gH~~~V~~Vafsp 1564 (1566)
.-|+-+ +|+|.-.+|+||++|..|++|....-+ .+.+.+||.+.|++|-|+|
T Consensus 207 RGVNwa-----------AfhpTlpliVSG~DDRqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp 260 (1202)
T KOG0292|consen 207 RGVNWA-----------AFHPTLPLIVSGADDRQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHP 260 (1202)
T ss_pred cccceE-----------EecCCcceEEecCCcceeeEEEeccccceeehhhhcccCCcceEEecC
Confidence 333334 445555689999999999999987544 4567789999999999999
No 266
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.86 E-value=2.7e-23 Score=251.06 Aligned_cols=196 Identities=19% Similarity=0.238 Sum_probs=159.5
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
...+|++.+.||+|+||.||+|++. .++..+|+|.+.+.........++. +|+.+++.++||||++
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~ 79 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDT------VTGQNVAIKKLSRPFQNVTHAKRAY--------RELVLMKLVNHKNIIG 79 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEEC------CCCCEEEEEecCccccChhHHHHHH--------HHHHHHHhcCCCCCcc
Confidence 4678999999999999999998863 4788999999865322222222333 5999999999999999
Q ss_pred cccccccc------CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc
Q 000399 240 VLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 240 l~~~~~~~------~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~ 313 (1566)
++++|... ...|+||||++++|.+.+... +++..+..++.|++.||.|||++||+||||||+||+++.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~ 155 (353)
T cd07850 80 LLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDC 155 (353)
T ss_pred eeeeeccCCCccccCcEEEEEeccCCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC
Confidence 99988644 357999999999999888632 78888999999999999999999999999999999999998
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
.+||+|||+++...... . .....++..|+|||++.+..++...|+|+.|++ .+..+.|+
T Consensus 156 --~~kL~Dfg~~~~~~~~~------~------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~-------l~~l~~g~ 214 (353)
T cd07850 156 --TLKILDFGLARTAGTSF------M------MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI-------MGEMIRGT 214 (353)
T ss_pred --CEEEccCccceeCCCCC------C------CCCCcccccccCHHHHhCCCCCCchhhHhHHHH-------HHHHHHCC
Confidence 79999999998643210 0 112247788999999999899999999999987 66666776
Q ss_pred c
Q 000399 394 R 394 (1566)
Q Consensus 394 s 394 (1566)
.
T Consensus 215 ~ 215 (353)
T cd07850 215 V 215 (353)
T ss_pred C
Confidence 4
No 267
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.86 E-value=3.6e-23 Score=238.00 Aligned_cols=197 Identities=13% Similarity=0.121 Sum_probs=161.0
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++.+.||+|+||.||+|.+ ..+..+|+|.+..... ....++. +|+.+++.++||||+++
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~-------~~~~~~~~k~~~~~~~--~~~~~~~--------~e~~~l~~l~~~~i~~~ 67 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLW-------KNRVRVAIKILKSDDL--LKQQDFQ--------KEVQALKRLRHKHLISL 67 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEe-------cCCCcEEEEeccccch--hhHHHHH--------HHHHHHhcCCCcchhhe
Confidence 45799999999999999999886 3478899999875432 1122333 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.+.+..++||||+++ +|.++++......++...++.++.||+.||.|||++||+||||||+||++++++ .+||
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~--~~kl 145 (261)
T cd05148 68 FAVCSVGEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDL--VCKV 145 (261)
T ss_pred eeeEecCCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCc--eEEE
Confidence 9999999999999999997 999999865555678888999999999999999999999999999999999998 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
+|||+++........ .....++..|++||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 146 ~d~g~~~~~~~~~~~-----------~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~-------l~~l~~~g~~ 203 (261)
T cd05148 146 ADFGLARLIKEDVYL-----------SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGIL-------LYEMFTYGQV 203 (261)
T ss_pred ccccchhhcCCcccc-----------ccCCCCceEecCHHHHccCCCCchhhHHHHHHH-------HHHHHcCCCC
Confidence 999999864321000 112235667999999988888889999999987 566665 554
No 268
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.86 E-value=2.3e-23 Score=245.97 Aligned_cols=198 Identities=16% Similarity=0.157 Sum_probs=153.0
Q ss_pred hcccccceeeeecchhhHHHHHhhhc-cCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFL-SGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~-~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV 238 (1566)
.++|++.+.||+|+||.||+|+.... +....++..+|+|.+.... ......++. +|+.+++.+ +||||+
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~~i~ 84 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA-TEKDLSDLV--------SEMEMMKMIGKHKNII 84 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc-chHHHHHHH--------HHHHHHHhhccCCCch
Confidence 56899999999999999998863210 1122345679999876432 222223333 599999999 899999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCc--------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCcc
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 303 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLK 303 (1566)
++++++......|+||||+++ +|.+++.... ...++...+..++.||+.||.|||++||+|||||
T Consensus 85 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlk 164 (304)
T cd05101 85 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLA 164 (304)
T ss_pred heeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence 999999999999999999986 9999987421 1235666788899999999999999999999999
Q ss_pred CCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 304 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 304 p~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|+||+++.++ .+||+|||+++......... ....-.++..|+|||++.+..++...|+|+.|++
T Consensus 165 p~Nili~~~~--~~kl~D~g~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 228 (304)
T cd05101 165 ARNVLVTENN--VMKIADFGLARDVNNIDYYK---------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 228 (304)
T ss_pred cceEEEcCCC--cEEECCCccceecccccccc---------cccCCCCCceeeCchhhccCCCCchhhHHHHHHH
Confidence 9999999888 79999999998654211100 0011124567999999988889999999999987
No 269
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.86 E-value=2.8e-23 Score=239.63 Aligned_cols=206 Identities=14% Similarity=0.113 Sum_probs=160.6
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||+||+|.+ .++..+|+|.+...........+... ...+|+++|+.++|+||+++++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~-------~~~~~~avk~~~~~~~~~~~~~~~~~----~~~~e~~~l~~l~~~~i~~~~~ 69 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLT-------NQGQLIAVKQVELDTSNVLAAEKEYE----KLQEEVDLLKSLKHVNIVQYLG 69 (265)
T ss_pred CccccceEeccCCeEEEEEEE-------cCCCeEEEEEeecCccchhhHHHHHH----HHHHHHHHHHhcCCCCEeeEee
Confidence 488899999999999998763 46788999998754322111111111 1126999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+.+..|+||||+++ +|.+++.. ...+++..++.++.|++.||.|||+.+|+|+||||+||+++.++ .+||+|
T Consensus 70 ~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~--~~~l~d 145 (265)
T cd06631 70 TCLDDNTISIFMEFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNG--IIKLID 145 (265)
T ss_pred EeecCCeEEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCC--eEEecc
Confidence 99999999999999987 99999973 34578888999999999999999999999999999999999888 699999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++.......... . ........++..|+|||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 146 fg~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~-------~~~l~~g~~p 207 (265)
T cd06631 146 FGCARRLAWVGLHGT----H-SNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCT-------VFEMATGKPP 207 (265)
T ss_pred chhhHhhhhcccccc----c-cccccccCCCccccChhhhcCCCCcchhhHHHHHHH-------HHHHHhCCCc
Confidence 999885431110000 0 001122347889999999998888899999999987 6667777653
No 270
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.86 E-value=4.6e-23 Score=248.17 Aligned_cols=197 Identities=17% Similarity=0.162 Sum_probs=150.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|.+.- .....+++.||||++..... ......++ +|+.+|.++ +||||++
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~-~~~~~~~~~vavK~~~~~~~-~~~~~~~~--------~E~~~l~~l~~h~niv~ 75 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFG-IDKTATCRTVAVKMLKEGAT-HSEHRALM--------SELKILIHIGHHLNVVN 75 (343)
T ss_pred hhHhcccccccCCccceEEEEeecc-CCccccceeEEEEEeccCCC-hHHHHHHH--------HHHHHHHhccCCccHhh
Confidence 4589999999999999999987421 11235678999999875322 12222333 599999999 6899999
Q ss_pred cccccccc-CceeeeccCCcc-chhhhhccCc------------------------------------------------
Q 000399 240 VLGLLKTS-GLITSVIPKTPY-TLENILQFSP------------------------------------------------ 269 (1566)
Q Consensus 240 l~~~~~~~-~~l~LV~E~~~g-sL~~~l~~~~------------------------------------------------ 269 (1566)
+++++... ..+++||||+++ +|.+++....
T Consensus 76 ~~~~~~~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (343)
T cd05103 76 LLGACTKPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEE 155 (343)
T ss_pred hcceeecCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCC
Confidence 99988654 578999999997 9999886321
Q ss_pred -----------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCcccccc
Q 000399 270 -----------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIAD 332 (1566)
Q Consensus 270 -----------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~~~~~ 332 (1566)
...++...+..++.||+.||.|||++||+||||||+|||++.++ .+||+|||+++......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~--~~kl~dfg~~~~~~~~~ 233 (343)
T cd05103 156 KSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENN--VVKICDFGLARDIYKDP 233 (343)
T ss_pred CccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCC--cEEEEecccccccccCc
Confidence 01245666778999999999999999999999999999999888 79999999998643211
Q ss_pred ccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 333 WCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
... ......++..|+|||.+.+..++...|+|+.|++
T Consensus 234 ~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 270 (343)
T cd05103 234 DYV---------RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVL 270 (343)
T ss_pred chh---------hcCCCCCCcceECcHHhcCCCCCchhhHHHHHHH
Confidence 100 0112235667999999988889999999999987
No 271
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.86 E-value=4.1e-23 Score=238.35 Aligned_cols=207 Identities=18% Similarity=0.198 Sum_probs=161.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc---cccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ---ESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~---~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
+|.+.+.||+|+||.||+|.+. .++..+|+|.+........ ...+... ...+|+.++++++||||++
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~~~~----~~~~e~~~l~~l~h~~i~~ 70 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNA------SSGELMAVKQVELPSVSASSKDRKRSMLD----ALAREIALLKELQHENIVQ 70 (267)
T ss_pred CccccceeecCCCeEEEEEEec------CCCcEEEEEEecCCCcccchhHHHHHHHH----HHHHHHHHHHhcCCCCeee
Confidence 4788899999999999998853 4578899998875433221 1111111 1126999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++++...+..++||||+++ +|.+++.. .+.+++..++.++.|++.||.|||++|++||||||+||++++++ .+|
T Consensus 71 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~--~~~ 146 (267)
T cd06628 71 YLGSSLDADHLNIFLEYVPGGSVAALLNN--YGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKG--GIK 146 (267)
T ss_pred EEEEEEeCCccEEEEEecCCCCHHHHHHh--ccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCC--CEE
Confidence 99999999999999999987 99999973 35578888999999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||+++............ .......|+..|+|||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 147 l~dfg~~~~~~~~~~~~~~~-----~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~i-------l~~l~~g~~p 211 (267)
T cd06628 147 ISDFGISKKLEANSLSTKTN-----GARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCL-------VVEMLTGKHP 211 (267)
T ss_pred ecccCCCcccccccccCCcc-----ccccccCCCcCccChhHhccCCCCchhhhHHHHHH-------HHHHhhCCCC
Confidence 99999998654211100000 01112347788999999988888889999999988 6777777653
No 272
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.86 E-value=2.2e-23 Score=225.09 Aligned_cols=197 Identities=17% Similarity=0.144 Sum_probs=154.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|||+-||+++. ..++..+|+|++.-.. .++.++.+ +|++.-++++||||+++
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~------~s~~~~YAlKkI~c~~--~~~~e~~~--------rEid~~rkf~s~~vl~l 83 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKG------LSTGHLYALKKILCHS--QEDIEEAL--------REIDNHRKFNSPNVLRL 83 (302)
T ss_pred CceEEEeeeecCCCceeeeeecc------cCcccchhhheeeccc--hHHHHHHH--------HHHHHHHhhCCcchHHH
Confidence 45899999999999999999885 5789999999987643 23333333 69999999999999999
Q ss_pred cccccccC-----ceeeeccCCc-cchhhhhccCcc--cccchhHHHHHHHHHHHHHHHHhhcc--ccCCCccCCCcccc
Q 000399 241 LGLLKTSG-----LITSVIPKTP-YTLENILQFSPN--ALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLT 310 (1566)
Q Consensus 241 ~~~~~~~~-----~l~LV~E~~~-gsL~~~l~~~~~--~~l~~~~~~~i~~Qil~aL~yLH~~g--IiHrDLKp~NILl~ 310 (1566)
+++...+. ..||+++|.. |+|.+.+...+. ..+++.++..|+.+|++||++||+.. ++||||||.|||++
T Consensus 84 ~dh~l~~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls 163 (302)
T KOG2345|consen 84 VDHQLREEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS 163 (302)
T ss_pred HHHHHHhhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec
Confidence 99876543 5999999876 699999986433 35899999999999999999999999 99999999999999
Q ss_pred ccchhhhhhcCcCCCCccccccccCCCCCCceeeee-cCCccccccccccccc---ccchhhcccccccccc
Q 000399 311 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCI-EGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 311 ~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~-~~~~gt~~Y~APE~l~---~~~y~~~~d~Ws~G~i 378 (1566)
+.+ .++|.|||.++.....-.... ...+...+. +.| |..|+|||++. +...++.+|+|+.||.
T Consensus 164 ~~~--~~vl~D~GS~~~a~i~i~~~~-~a~~lQe~a~e~C--t~pyRAPELf~vk~~~ti~ertDIWSLGCt 230 (302)
T KOG2345|consen 164 DSG--LPVLMDLGSATQAPIQIEGSR-QALRLQEWAEERC--TIPYRAPELFNVKSHCTITERTDIWSLGCT 230 (302)
T ss_pred CCC--ceEEEeccCccccceEeechH-HHHHHHHHHHHhC--CCcccCchheecccCcccccccchhhhhHH
Confidence 988 799999999986543111100 011111121 222 45699999996 4456789999999987
No 273
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.86 E-value=5.8e-23 Score=241.40 Aligned_cols=198 Identities=18% Similarity=0.194 Sum_probs=158.1
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc--ccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG--QESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~--~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
+|++.+.||+|+||.||+|.+. .++..+|+|.+....... ......+ .+|+.+++.++||||+++
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~------~~~~~v~iK~~~~~~~~~~~~~~~~~~-------~~e~~~l~~~~h~~i~~~ 67 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDK------ETGRIVAIKKIKLGERKEAKDGINFTA-------LREIKLLQELKHPNIIGL 67 (298)
T ss_pred CceeeeeeeeccccEEEEEEEC------CCCcEEEEEEEeccccccccchhhHHH-------HHHHHHHhhcCCCCChhh
Confidence 4888999999999999998853 468899999987654321 1111111 258999999999999999
Q ss_pred cccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++++.+.+.+++||||+.++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~--~~~l~ 144 (298)
T cd07841 68 LDVFGHKSNINLVFEFMETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDG--VLKLA 144 (298)
T ss_pred hheeecCCEEEEEEcccCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCC--CEEEc
Confidence 99999999999999999779999997432 3578889999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|||+++........ .....+++.|+|||.+.+ ..++...|+|+.|++ .+..+.|.+
T Consensus 145 dfg~~~~~~~~~~~-----------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i-------l~e~~~g~~ 201 (298)
T cd07841 145 DFGLARSFGSPNRK-----------MTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCI-------FAELLLRVP 201 (298)
T ss_pred cceeeeeccCCCcc-----------ccccccceeeeCHHHHhCCCCCCcHHHHHHHHHH-------HHHHHcCCc
Confidence 99999864421100 011235778999998854 456788999999987 666766754
No 274
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.86 E-value=3e-23 Score=241.97 Aligned_cols=197 Identities=15% Similarity=0.154 Sum_probs=152.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++.+.||+|+||.||+|.+.- ......+..+|+|++..... ......+. +|+.++..++||||+++
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~-~~~~~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~~~~l~h~~iv~~ 73 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFG-TAPGEQTQAVAIKTLKDKAE-GPLREEFK--------HEAMMRSRLQHPNIVCL 73 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEec-CCCCCceeEEEEEEccCCCC-HHHHHHHH--------HHHHHHhcCCCCCcCeE
Confidence 3578999999999999999987421 11123567899999874321 11112222 58899999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccC--------------cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCC
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFS--------------PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 305 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~--------------~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~ 305 (1566)
++++.+.+..++++||+++ +|.+++... ....++...+..++.|++.||.|||++||+||||||+
T Consensus 74 ~~~~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~ 153 (283)
T cd05091 74 LGVVTKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATR 153 (283)
T ss_pred EEEEcCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchh
Confidence 9999999999999999986 999888521 1224677778899999999999999999999999999
Q ss_pred CccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 306 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 306 NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
||++++++ .+||+|||+++........ .......+++.|+|||.+.+..++...|+|+.|++
T Consensus 154 Nil~~~~~--~~kl~Dfg~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~ 215 (283)
T cd05091 154 NVLVFDKL--NVKISDLGLFREVYAADYY---------KLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVV 215 (283)
T ss_pred heEecCCC--ceEecccccccccccchhe---------eeccCccCCccccCHHHHhcCCCCcchhHHHHHHH
Confidence 99999888 6999999999864421110 00112235678999999988888899999999987
No 275
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.86 E-value=6.1e-23 Score=239.56 Aligned_cols=203 Identities=16% Similarity=0.132 Sum_probs=156.4
Q ss_pred ccc-ccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 162 TAL-FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y-~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
++| ++++.||+|+||+||++... .....++..+|+|.+..... ......+. +|+++|+.++||||+++
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~--~~~~~~~~~vaiK~~~~~~~-~~~~~~~~--------~E~~~l~~l~h~~i~~~ 71 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYD--PANDGTGEMVAVKTLKRECG-QQNTSGWK--------KEINILKTLYHENIVKY 71 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEc--cccCCCCceEEEEEeccccC-hHHHHHHH--------HHHHHHHhCCCCCEeeE
Confidence 345 89999999999999765421 11235678899999875421 12223333 59999999999999999
Q ss_pred ccccccc--CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 241 LGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 241 ~~~~~~~--~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++++... ..+|+||||+++ +|.+++.. ..+++..++.++.|++.||.|||++||+||||||+|||++.++ .+
T Consensus 72 ~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~ 146 (283)
T cd05080 72 KGCCSEQGGKGLQLIMEYVPLGSLRDYLPK---HKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDR--LV 146 (283)
T ss_pred EEEEecCCCceEEEEecCCCCCCHHHHHHH---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCC--cE
Confidence 9987653 468999999997 99999873 3478899999999999999999999999999999999999988 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+|||+++......... . ......++..|+|||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 147 ~l~dfg~~~~~~~~~~~~-----~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~-------l~el~tg~~p 209 (283)
T cd05080 147 KIGDFGLAKAVPEGHEYY-----R---VREDGDSPVFWYAVECLKENKFSYASDVWSFGVT-------LYELLTHCDS 209 (283)
T ss_pred EEeecccccccCCcchhh-----c---cCCCCCCCceeeCHhHhcccCCCcccccHHHHHH-------HHHHHhCCCC
Confidence 999999998644211100 0 0011235567999999988888999999999987 6777777653
No 276
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.86 E-value=2.9e-23 Score=245.38 Aligned_cols=198 Identities=18% Similarity=0.204 Sum_probs=152.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhh--ccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCV--LGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNV 237 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~--~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNI 237 (1566)
.++|++.+.||+|+||.||+|.++ .++. .+|+|.+... .......++. +|+.++.++ +||||
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~------~~~~~~~~~ik~~~~~-~~~~~~~~~~--------~Ei~~l~~l~~h~~i 70 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIK------KDGLRMDAAIKRMKEY-ASKDDHRDFA--------GELEVLCKLGHHPNI 70 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEc------cCCceeeEEEEEeccc-CCHHHHHHHH--------HHHHHHHHhcCCCCc
Confidence 458999999999999999998853 2343 4566665432 1112222333 589999999 89999
Q ss_pred ccccccccccCceeeeccCCcc-chhhhhccCc--------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCc
Q 000399 238 APVLGLLKTSGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV 302 (1566)
Q Consensus 238 V~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDL 302 (1566)
+++++++.+++..|+||||+++ +|.++++... ...+++..++.++.||+.||+|||++||+||||
T Consensus 71 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl 150 (303)
T cd05088 71 INLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDL 150 (303)
T ss_pred ceEEEEECCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCcccccc
Confidence 9999999999999999999986 9999987422 124678889999999999999999999999999
Q ss_pred cCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCch
Q 000399 303 CPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFE 382 (1566)
Q Consensus 303 Kp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfe 382 (1566)
||+|||++.++ .+||+|||+++...... .. ....++..|+|||.+.+..++...|+|+.|++
T Consensus 151 kp~Nili~~~~--~~kl~dfg~~~~~~~~~------~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i---- 212 (303)
T cd05088 151 AARNILVGENY--VAKIADFGLSRGQEVYV------KK------TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL---- 212 (303)
T ss_pred chheEEecCCC--cEEeCccccCcccchhh------hc------ccCCCcccccCHHHHhccCCcccccchhhhhH----
Confidence 99999999988 79999999987422100 00 01123556999999988888899999999987
Q ss_pred hhhHHHhhc-ccc
Q 000399 383 YLLFLNKLA-GRR 394 (1566)
Q Consensus 383 yL~~ln~~a-grs 394 (1566)
.+..++ |+.
T Consensus 213 ---l~ellt~g~~ 222 (303)
T cd05088 213 ---LWEIVSLGGT 222 (303)
T ss_pred ---HHHHHhcCCC
Confidence 555554 543
No 277
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.86 E-value=4.6e-23 Score=236.01 Aligned_cols=199 Identities=19% Similarity=0.175 Sum_probs=162.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|.+. .++..+|+|.+............+. +|+.+|+.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~~ 66 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRK------ADQKLVIIKQIPVEQMTKDERLAAQ--------NECQVLKLLSHPNIIEYYE 66 (256)
T ss_pred CceEEEEecccCceEEEEEEEc------CCCcEEEEEEEeccccccHHHHHHH--------HHHHHHhhCCCCchhheee
Confidence 5889999999999999988753 4688899999876544333333344 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+...+..++||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++. .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~-~~~l~d 145 (256)
T cd08220 67 NFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKM-VVKIGD 145 (256)
T ss_pred eEecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCC-EEEEcc
Confidence 99999999999999987 9999997544445788889999999999999999999999999999999986652 589999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++....... .....++..|+|||.+.+..++.+.|+|+.|++ .+..++|+.+
T Consensus 146 ~~~~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~-------l~~l~~~~~~ 200 (256)
T cd08220 146 FGISKILSSKSK------------AYTVVGTPCYISPELCEGKPYNQKSDIWALGCV-------LYELASLKRA 200 (256)
T ss_pred CCCceecCCCcc------------ccccccCCcccCchhccCCCCCcccchHHHHHH-------HHHHHhCCCC
Confidence 999986442100 112347788999999988888889999999987 5666666654
No 278
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.86 E-value=2.9e-23 Score=240.95 Aligned_cols=197 Identities=15% Similarity=0.098 Sum_probs=153.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.++.. .....+..+|+|.+..... .....++. +|+.+|+.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~~~~aik~~~~~~~-~~~~~~~~--------~e~~~l~~~~~~~i~~~ 74 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGV-VKGEPETRVAIKTVNENAS-MRERIEFL--------NEASVMKEFNCHHVVRL 74 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEecc-CCCCcceeEEEEecCCccC-HHHHHHHH--------HHHHHHHhCCCCceeEE
Confidence 45899999999999999998875311 1123457899999764321 12222343 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCc--------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP--------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~ 311 (1566)
++++......|+||||+++ +|.+++.... ...++...+..++.|++.||.|||+++|+||||||+||+++.
T Consensus 75 ~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~ 154 (277)
T cd05032 75 LGVVSTGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAE 154 (277)
T ss_pred EEEEcCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcC
Confidence 9999999999999999985 9999986421 122456678889999999999999999999999999999999
Q ss_pred cchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 312 ~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
++ .+||+|||+++......... . .....++..|+|||.+.+..++...|+|+.|++
T Consensus 155 ~~--~~kl~dfg~~~~~~~~~~~~-~--------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 210 (277)
T cd05032 155 DL--TVKIGDFGMTRDIYETDYYR-K--------GGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVV 210 (277)
T ss_pred CC--CEEECCcccchhhccCcccc-c--------CCCCCccccccCHHHHhcCCCCcccchHHHHHH
Confidence 98 79999999998543211100 0 011225677999999988888899999999987
No 279
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.86 E-value=5e-23 Score=243.35 Aligned_cols=208 Identities=14% Similarity=0.120 Sum_probs=161.6
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+|++.+.||+|+||.||++.++ ..+..||+|.+.+....... ...+. +|+++++.++||||++++
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~v~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~ 67 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHK------ETRQRFAMKKINKQNLILRNQIQQVF--------VERDILTFAENPFVVSMF 67 (305)
T ss_pred CceEeeEeecCCCeeEEEEEEC------CCCcEEEEEEeehhhhhhHHHHHHHH--------HHHHHHHhCCCCCeeeeE
Confidence 6899999999999999998863 46788999998765332222 22233 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+.+++.+|+||||++| +|.+++.. .+.+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+
T Consensus 68 ~~~~~~~~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~--~~~l~ 143 (305)
T cd05609 68 CSFETKRHLCMVMEYVEGGDCATLLKN--IGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMG--HIKLT 143 (305)
T ss_pred EEEecCCEEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCC--CEEEe
Confidence 999999999999999997 99999973 34578888999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccC---CCCCCc-eeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCT---IPTSPM-IGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~---~~~~~~-~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++......... ...... .........++..|+|||.+.+..++..+|.|+.|++ .++.++|+.+
T Consensus 144 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~v-------l~el~~g~~p 215 (305)
T cd05609 144 DFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGII-------LYEFLVGCVP 215 (305)
T ss_pred eCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 999987422100000 000000 0001112347788999999988888999999999987 6666777643
No 280
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.86 E-value=4.8e-23 Score=242.64 Aligned_cols=198 Identities=12% Similarity=0.089 Sum_probs=162.1
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
....+|++.+.||+|+||.||+|.+. .++..+|+|.+...... ....+. +|+.+++.++||||+
T Consensus 17 ~~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~v~ik~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~v~ 80 (296)
T cd06654 17 DPKKKYTRFEKIGQGASGTVYTAMDV------ATGQEVAIRQMNLQQQP--KKELII--------NEILVMRENKNPNIV 80 (296)
T ss_pred CcccceeeEEEecCCCCeEEEEEEEC------CCCcEEEEEEEecCCcc--hHHHHH--------HHHHHHHhCCCCCEe
Confidence 34568999999999999999998753 56788999998754322 122233 589999999999999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++++.+......|+||||+++ +|.+++.. ..++...+..++.|++.||.|||++||+||||||+||+++.++ .+
T Consensus 81 ~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~--~~ 155 (296)
T cd06654 81 NYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SV 155 (296)
T ss_pred eEEEEEEeCCEEEEeecccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCC--CE
Confidence 999999999999999999987 99998862 3467888899999999999999999999999999999999988 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+|||+++....... ......+++.|+|||.+.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 156 kl~dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvi-------l~~l~~g~~p 215 (296)
T cd06654 156 KLTDFGFCAQITPEQS-----------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM-------AIEMIEGEPP 215 (296)
T ss_pred EECccccchhcccccc-----------ccCcccCCccccCHHHHcCCCCCccchHHHHHHH-------HHHHHhCCCC
Confidence 9999999885432100 0112347889999999988888899999999987 6667778764
No 281
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.86 E-value=3e-23 Score=238.38 Aligned_cols=191 Identities=18% Similarity=0.201 Sum_probs=153.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++.+.||+|+||.||++.. .+..+|+|.+.... ..+.+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~--------~~~~~~~k~~~~~~----~~~~~~--------~e~~~l~~l~~~~i~~~ 64 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDY--------RGNKVAVKCIKNDA----TAQAFL--------AEASVMTQLRHSNLVQL 64 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEE--------cCCcEEEEEeCCCc----hHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 45899999999999999998763 46778999875432 122333 59999999999999999
Q ss_pred cccc-cccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 241 LGLL-KTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 241 ~~~~-~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
++++ ...+..|+||||+++ +|.++++......+++..+..++.|++.||.|||++||+||||||+||+++.++ .+|
T Consensus 65 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~--~~k 142 (256)
T cd05082 65 LGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDN--VAK 142 (256)
T ss_pred EEEEEcCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCC--cEE
Confidence 9976 455679999999986 999999754444577888899999999999999999999999999999999998 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
|+|||+++...... ....++..|+|||++.+..++..+|+|+.|++ .+..++ |+.
T Consensus 143 l~dfg~~~~~~~~~--------------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i-------~~~l~~~g~~ 198 (256)
T cd05082 143 VSDFGLTKEASSTQ--------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGIL-------LWEIYSFGRV 198 (256)
T ss_pred ecCCccceeccccC--------------CCCccceeecCHHHHccCCCCchhhhHHHHHH-------HHHHHhCCCC
Confidence 99999988543210 01123456999999988888899999999987 555554 554
No 282
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.86 E-value=5.8e-23 Score=240.68 Aligned_cols=204 Identities=14% Similarity=0.129 Sum_probs=159.5
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|.+.+.||+|+||.||++.+.. .....++..+|+|.+.... ......+. +|+.+|++++||||++++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~-~~~~~~~~~~~ik~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 73 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYN-LCPEQDKILVAVKTLKDAS--DNARKDFH--------REAELLTNLQHEHIVKFY 73 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEecc-CCCCCcceEEEEEecCCcC--HHHHHHHH--------HHHHHHHhCCCCCcceEE
Confidence 479999999999999999986421 1112456778999876431 22222333 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCc-----------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSP-----------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~-----------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl 309 (1566)
+++...+..++||||+++ +|.+++.... ...+++..++.++.|++.||.|||++||+||||||+|||+
T Consensus 74 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili 153 (288)
T cd05093 74 GVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV 153 (288)
T ss_pred EEEecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEE
Confidence 999999999999999986 9999986321 1247888899999999999999999999999999999999
Q ss_pred cccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHh
Q 000399 310 TDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNK 389 (1566)
Q Consensus 310 ~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~ 389 (1566)
++++ .+||+|||+++....... ......+.++..|+|||++.+..++...|+|+.|++ .+..
T Consensus 154 ~~~~--~~kl~dfg~~~~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~i-------l~~l 215 (288)
T cd05093 154 GENL--LVKIGDFGMSRDVYSTDY---------YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV-------LWEI 215 (288)
T ss_pred ccCC--cEEeccCCccccccCCce---------eecCCCCCccccccCHHHhccCCCCchhhHHHHHHH-------HHHH
Confidence 9998 799999999985432110 001122345778999999998888999999999987 5566
Q ss_pred hc-ccc
Q 000399 390 LA-GRR 394 (1566)
Q Consensus 390 ~a-grs 394 (1566)
++ |+.
T Consensus 216 ~t~g~~ 221 (288)
T cd05093 216 FTYGKQ 221 (288)
T ss_pred HhCCCC
Confidence 65 544
No 283
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.86 E-value=6.9e-23 Score=241.71 Aligned_cols=211 Identities=18% Similarity=0.185 Sum_probs=160.3
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.++ .++..+|+|.+............+ .+|+++++.++||||+++
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~--------~~e~~~l~~l~h~~i~~~ 72 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQI------KTGRVVALKKILMHNEKDGFPITA--------LREIKILKKLKHPNVVPL 72 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEEC------CCCcEEEEEEEEeccCCCCcchhH--------HHHHHHHHhcCCCCccch
Confidence 678999999999999999998863 467889999987643322211222 269999999999999999
Q ss_pred cccccccC--------ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 241 LGLLKTSG--------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 241 ~~~~~~~~--------~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
++++.... .+|+||||++++|...+.. ....+++..++.++.|++.||.|||++||+||||||+||+++++
T Consensus 73 ~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~-~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~ 151 (311)
T cd07866 73 IDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLEN-PSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQ 151 (311)
T ss_pred hhheecccccccccCceEEEEEecCCcCHHHHHhc-cccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence 99875433 5799999999988887763 23458899999999999999999999999999999999999999
Q ss_pred chhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhc
Q 000399 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~a 391 (1566)
+ .+||+|||+++........................+++.|+|||++.+ ..++...|+|+.|++ .+..+.
T Consensus 152 ~--~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i-------l~el~~ 222 (311)
T cd07866 152 G--ILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCV-------FAEMFT 222 (311)
T ss_pred C--CEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHH-------HHHHHh
Confidence 8 799999999986442211111000000011233457888999998754 457888999999987 666667
Q ss_pred cccc
Q 000399 392 GRRW 395 (1566)
Q Consensus 392 grs~ 395 (1566)
|+.+
T Consensus 223 g~~~ 226 (311)
T cd07866 223 RRPI 226 (311)
T ss_pred CCCC
Confidence 7643
No 284
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.86 E-value=1.1e-21 Score=235.27 Aligned_cols=212 Identities=18% Similarity=0.273 Sum_probs=178.4
Q ss_pred cCCCCCCCCCcccccccC-ccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccc
Q 000399 1289 PTPAASWDGPDFLGRVGG-LKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCV 1366 (1566)
Q Consensus 1289 fSpdg~~~~~~~LaSgS~-D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i 1366 (1566)
++..|.| ||-||. -|.+.||+..+. -+...+||...+++++.+|||+++|||+. ||.|||||..+|-|.
T Consensus 315 ~N~tGDW-----iA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~e----DgKVKvWn~~SgfC~ 385 (893)
T KOG0291|consen 315 FNSTGDW-----IAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAE----DGKVKVWNTQSGFCF 385 (893)
T ss_pred ecccCCE-----EEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccC----CCcEEEEeccCceEE
Confidence 5666887 776664 368999998875 55667899999999999999999999998 999999999999999
Q ss_pred cccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCccccc
Q 000399 1367 SGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSS 1444 (1566)
Q Consensus 1367 ~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1444 (1566)
.+|..|++.|+.+.|+..++.++|. ||+|+.||+...++-++|..+...
T Consensus 386 vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~----------------------------- 436 (893)
T KOG0291|consen 386 VTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPI----------------------------- 436 (893)
T ss_pred EEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCce-----------------------------
Confidence 9999999999999999999988755 999999999999999999765321
Q ss_pred ccccccccchhHHHhhhhhccceEEEEecCc-eEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccc
Q 000399 1445 GILSTAFDGNLYTCLHHIECVERLVVGIGNG-SLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVAS 1523 (1566)
Q Consensus 1445 ~V~svafsp~~~t~v~~~pdg~~L~sgs~Dg-tIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spd 1523 (1566)
...|++-+| .|.++.+|+.|. .|.+|++++|+.+..+.|| .++|.+++|+ |+
T Consensus 437 QfscvavD~----------sGelV~AG~~d~F~IfvWS~qTGqllDiLsGH------EgPVs~l~f~-----------~~ 489 (893)
T KOG0291|consen 437 QFSCVAVDP----------SGELVCAGAQDSFEIFVWSVQTGQLLDILSGH------EGPVSGLSFS-----------PD 489 (893)
T ss_pred eeeEEEEcC----------CCCEEEeeccceEEEEEEEeecCeeeehhcCC------CCcceeeEEc-----------cc
Confidence 223444444 489999999998 5999999999999999987 4556666665 56
Q ss_pred hhHHHhccCCCceeEEeeccC-ceeEEeeccCceeeEeeeeccC
Q 000399 1524 PSWIAAGLSSGQCRLFDVRSG-NVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1524 g~~LaSGs~Dg~I~lWD~~sg-k~l~~l~gH~~~V~~VafspdG 1566 (1566)
|..|||||+|.+||+||+-.. ..+.+++ +...|+.|+|+|||
T Consensus 490 ~~~LaS~SWDkTVRiW~if~s~~~vEtl~-i~sdvl~vsfrPdG 532 (893)
T KOG0291|consen 490 GSLLASGSWDKTVRIWDIFSSSGTVETLE-IRSDVLAVSFRPDG 532 (893)
T ss_pred cCeEEeccccceEEEEEeeccCceeeeEe-eccceeEEEEcCCC
Confidence 679999999999999999755 3455565 78899999999997
No 285
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.86 E-value=1.5e-21 Score=221.65 Aligned_cols=251 Identities=21% Similarity=0.350 Sum_probs=200.2
Q ss_pred ccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCccccee
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQ 1356 (1566)
Q Consensus 1280 ~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVr 1356 (1566)
..|.+.|.+ ++|++.+ +++|+.|+.+.+|++.++ ....+.+|...+.++.|++++..+++++. |+.|+
T Consensus 6 ~~h~~~i~~~~~~~~~~~-----l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~----~~~i~ 76 (289)
T cd00200 6 KGHTGGVTCVAFSPDGKL-----LATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSS----DKTIR 76 (289)
T ss_pred cccCCCEEEEEEcCCCCE-----EEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcC----CCeEE
Confidence 358888888 7999887 999999999999999876 56677889999999999999999999998 89999
Q ss_pred eEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccc-----------cCCCC
Q 000399 1357 KWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLH-----------GGSPS 1423 (1566)
Q Consensus 1357 lWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~-----------~~~~~ 1423 (1566)
+||+.+++.+..+.+|...|.+++|++++..++++ |+.|++||+++++....+..|...... .+..+
T Consensus 77 i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~ 156 (289)
T cd00200 77 LWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQD 156 (289)
T ss_pred EEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCC
Confidence 99999988888899999999999999998877655 999999999988888877755432111 11113
Q ss_pred CcccccccCCCC-CCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchh
Q 000399 1424 SSISKINTDQVG-MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1502 (1566)
Q Consensus 1424 ~~~~~~~~~~~~-~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~ 1502 (1566)
+.+.+|+..... ...+..+...|.++.|+|+ ++.+++++.|+.|++||+++++.+..+..+ ..
T Consensus 157 ~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~----------~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~------~~ 220 (289)
T cd00200 157 GTIKLWDLRTGKCVATLTGHTGEVNSVAFSPD----------GEKLLSSSSDGTIKLWDLSTGKCLGTLRGH------EN 220 (289)
T ss_pred CcEEEEEccccccceeEecCccccceEEECCC----------cCEEEEecCCCcEEEEECCCCceecchhhc------CC
Confidence 334444443222 2223345556777777665 888999999999999999999888887655 33
Q ss_pred hHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1503 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1503 ~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
.+.+++++ +++.++++++.||.|++||+.+++.+..+.+|...|.+++|+|+|
T Consensus 221 ~i~~~~~~-----------~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 273 (289)
T cd00200 221 GVNSVAFS-----------PDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDG 273 (289)
T ss_pred ceEEEEEc-----------CCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCC
Confidence 45556655 445688888889999999999999999999999999999999974
No 286
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.86 E-value=2.9e-23 Score=243.21 Aligned_cols=197 Identities=14% Similarity=0.084 Sum_probs=151.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|..+. ......+..+|+|.+..... ......+. +|+.+++.++||||+++
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~-~~~~~~~~~vavK~~~~~~~-~~~~~~~~--------~e~~~l~~l~~~~i~~~ 74 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARD-IIKGEAETRVAVKTVNESAS-LRERIEFL--------NEASVMKGFTCHHVVRL 74 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEec-cCCCCcceEEEEEECCCcCC-HHHHHHHH--------HHHHHHHhCCCCCeeeE
Confidence 4689999999999999999876421 01123456899998764321 12222333 58899999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCc--------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP--------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~ 311 (1566)
++++.+.+..|+||||+++ +|.++++... ....+...++.++.|++.||.|||+++|+||||||+||+++.
T Consensus 75 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~ 154 (288)
T cd05061 75 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAH 154 (288)
T ss_pred EEEEcCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcC
Confidence 9999999999999999986 9999997421 122345567889999999999999999999999999999999
Q ss_pred cchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 312 ~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
++ .+||+|||+++.......... .....++..|+|||.+.+..++...|+|+.|++
T Consensus 155 ~~--~~~L~Dfg~~~~~~~~~~~~~---------~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~ 210 (288)
T cd05061 155 DF--TVKIGDFGMTRDIYETDYYRK---------GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVV 210 (288)
T ss_pred CC--cEEECcCCccccccccccccc---------cCCCcccccccCHHHhccCCCChHhHHHHHHHH
Confidence 88 799999999985432111000 011224567999999988888999999999987
No 287
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.86 E-value=4e-23 Score=242.36 Aligned_cols=201 Identities=22% Similarity=0.218 Sum_probs=160.5
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..++|++.+.||+|+||.||+|.++ .++..+|+|.++...........+. +|+.+++.++||||++
T Consensus 3 ~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~ni~~ 68 (293)
T cd07843 3 SVDEYEKLNRIEEGTYGVVYRARDK------KTGEIVALKKLKMEKEKEGFPITSL--------REINILLKLQHPNIVT 68 (293)
T ss_pred chhhhhhhhhhcCCCCeEEEEEEEC------CCCcEEEEEEEeeccccccchhhHH--------HHHHHHHhcCCCCEEE
Confidence 3568999999999999999998863 4678899999876433221111222 5899999999999999
Q ss_pred cccccccc--CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 240 VLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 240 l~~~~~~~--~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
+++++... ...|+||||++++|.+++.... ..+++..++.++.||+.||.|||++||+||||||+||+++.++ .+
T Consensus 69 ~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~--~~ 145 (293)
T cd07843 69 VKEVVVGSNLDKIYMVMEYVEHDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRG--IL 145 (293)
T ss_pred EEEEEEecCCCcEEEEehhcCcCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCC--cE
Confidence 99998877 8999999999999999887432 3578999999999999999999999999999999999999998 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+|||+++....... . .....+++.|+|||.+.+. .++..+|+|+.|++ .+..++|+.+
T Consensus 146 ~l~d~g~~~~~~~~~~------~-----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~-------l~~l~~g~~~ 206 (293)
T cd07843 146 KICDFGLAREYGSPLK------P-----YTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCI-------FAELLTKKPL 206 (293)
T ss_pred EEeecCceeeccCCcc------c-----cccccccccccCchhhcCCccccchhhHHHHHHH-------HHHHHhCCCC
Confidence 9999999986442110 0 0112367789999988654 46788999999987 6677777653
No 288
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.86 E-value=5.2e-23 Score=237.68 Aligned_cols=195 Identities=16% Similarity=0.156 Sum_probs=154.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.++||+|+||.||+|++ .+...+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~-------~~~~~valK~~~~~~~~---~~~~~--------~E~~~l~~l~~~~i~~~ 66 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTW-------NGTTRVAIKTLKPGTMS---PEAFL--------QEAQVMKKLRHEKLVQL 66 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEe-------cCCceEEEEecccCccC---HHHHH--------HHHHHHHhCCCCCcceE
Confidence 35799999999999999999875 23345899998753321 12343 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+. .+..|+||||+++ +|.+++.......++...++.++.|++.||.|||+++|+||||||+||++++++ .+||
T Consensus 67 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~--~~~L 143 (262)
T cd05071 67 YAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENL--VCKV 143 (262)
T ss_pred EEEEC-CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCC--cEEe
Confidence 99875 4568999999996 999999754344567888899999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-cc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GR 393 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-gr 393 (1566)
+|||.++........ ......++..|++||...+..++..+|+|+.|++ .+..++ |+
T Consensus 144 ~dfg~~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~-------l~ellt~g~ 201 (262)
T cd05071 144 ADFGLARLIEDNEYT----------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL-------LTELTTKGR 201 (262)
T ss_pred ccCCceeeccccccc----------cccCCcccceecCHhHhccCCCCchhhHHHHHHH-------HHHHHcCCC
Confidence 999999754421100 0112235667999999988889999999999987 556665 54
No 289
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.86 E-value=3.1e-23 Score=238.94 Aligned_cols=196 Identities=15% Similarity=0.148 Sum_probs=155.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||++.+ ..+..+|+|.+..... ....+. +|+.+++.++|+||+++
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~-------~~~~~~~iK~~~~~~~---~~~~~~--------~e~~~l~~l~~~~i~~~ 66 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATY-------NKHTKVAVKTMKPGSM---SVEAFL--------AEANVMKTLQHDKLVKL 66 (260)
T ss_pred ccceeEEeEecCccceEEEEEEe-------cCCccEEEEecCCChh---HHHHHH--------HHHHHHHhcCCCCcceE
Confidence 46899999999999999998864 3456689998765322 122333 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+.. ...++||||+++ +|.+++.......++...++.++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 67 ~~~~~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~--~~~l 143 (260)
T cd05073 67 HAVVTK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASL--VCKI 143 (260)
T ss_pred EEEEcC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCC--cEEE
Confidence 999887 788999999986 999999754444567778888999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
+|||+++........ ......++..|+|||++....++...|.|+.|++ .+..++ |+.
T Consensus 144 ~d~~~~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~-------l~~l~t~g~~ 202 (260)
T cd05073 144 ADFGLARVIEDNEYT----------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGIL-------LMEIVTYGRI 202 (260)
T ss_pred CCCcceeeccCCCcc----------cccCCcccccccCHhHhccCCcCccccchHHHHH-------HHHHHhcCCC
Confidence 999999754321100 0011124566999999988888889999999987 566665 664
No 290
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.86 E-value=7e-23 Score=240.33 Aligned_cols=198 Identities=17% Similarity=0.190 Sum_probs=155.3
Q ss_pred hcccccceeeeecchhhHHHHHhhhccC----------CcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCC
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSG----------CLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 230 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~----------~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~ 230 (1566)
..+|++++.||+|+||.||+|.+....+ ....+..+|+|.+...... ....++. +|+++|+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~-~~~~~~~--------~e~~~l~ 74 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASD-NAREDFL--------KEVKILS 74 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCH-HHHHHHH--------HHHHHHH
Confidence 3579999999999999999887532111 1123466899988754222 2223333 5999999
Q ss_pred cccCCCcccccccccccCceeeeccCCcc-chhhhhccCc---------ccccchhHHHHHHHHHHHHHHHHhhccccCC
Q 000399 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSP---------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHR 300 (1566)
Q Consensus 231 ~l~HpNIV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~---------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHr 300 (1566)
.++||||+++++++..++..++||||+++ +|.+++.... ...+++..++.++.|++.||.|||++||+||
T Consensus 75 ~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~ 154 (296)
T cd05051 75 RLSDPNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHR 154 (296)
T ss_pred hcCCCCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCcccc
Confidence 99999999999999999999999999986 9999987432 1257888899999999999999999999999
Q ss_pred CccCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 301 SVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 301 DLKp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
||||+||+++.++ .++|+|||+++......... ......+++.|+|||.+.+..++...|+|+.|++
T Consensus 155 dlkp~Nili~~~~--~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~ 221 (296)
T cd05051 155 DLATRNCLVGKNY--TIKIADFGMSRNLYSSDYYR---------VQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVT 221 (296)
T ss_pred ccchhceeecCCC--ceEEccccceeecccCccee---------ecCcCCCCceecCHHHhhcCCCCccchhhhhHHH
Confidence 9999999999998 79999999998543211100 1112335678999999988888999999999987
No 291
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.86 E-value=5.6e-23 Score=246.31 Aligned_cols=203 Identities=21% Similarity=0.298 Sum_probs=160.3
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.++ .++..||+|.+............+. +|+.+|+.++||||+++
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~------~~~~~valK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv~~ 69 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDT------RSGKKVAIKKIPHAFDVPTLAKRTL--------RELKILRHFKHDNIIAI 69 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEc------CCCCEEEEEEeccccccccchHHHH--------HHHHHHHhcCCCCccCH
Confidence 468999999999999999998863 5688999999875432222222222 59999999999999999
Q ss_pred cccccc----cCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 241 LGLLKT----SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 241 ~~~~~~----~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
++++.. ...+|+||||+.++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .
T Consensus 70 ~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~--~ 145 (334)
T cd07855 70 RDILRPPGADFKDVYVVMDLMESDLHHIIHS--DQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDC--E 145 (334)
T ss_pred HHhccccCCCCceEEEEEehhhhhHHHHhcc--CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--c
Confidence 998864 347899999999999999873 34588999999999999999999999999999999999999998 7
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+||+|||+++......... ........++..|+|||++.+ ..++...|+|+.|++ .+..++|+.+
T Consensus 146 ~kl~dfg~~~~~~~~~~~~-------~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~-------l~el~~g~~p 211 (334)
T cd07855 146 LRIGDFGMARGLSSSPTEH-------KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCI-------FAEMLGRRQL 211 (334)
T ss_pred EEecccccceeecccCcCC-------CcccccccccccccChHHhcCCcccccccchHHHHHH-------HHHHHcCCCc
Confidence 9999999997543211110 001122357888999998765 457889999999987 6666777653
No 292
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.86 E-value=6.5e-23 Score=215.71 Aligned_cols=201 Identities=19% Similarity=0.253 Sum_probs=158.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCC-CcccCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVP-GCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL-~~l~HpNIV~ 239 (1566)
.+....+..||+|+||.|-+.++. .+|.+.|+|.+... ...+..++.+ +|+.+. +....|.+|.
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~------~sg~imAvKri~~t-vn~q~q~r~L--------~dldi~~r~~~CPf~V~ 109 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHI------QSGTIMAVKRIRAT-VNSQEQKRLL--------MDLDIIMRTVDCPFTVH 109 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeec------cCCeEEEEeeehhh-cChHHHHHHH--------HhhhhhccCCCCCeEEE
Confidence 346777899999999999988874 78999999998764 3344444444 588875 4457999999
Q ss_pred ccccccccCceeeeccCCccchhhhhcc--CcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhh
Q 000399 240 VLGLLKTSGLITSVIPKTPYTLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~gsL~~~l~~--~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
+||.+.....++|.||.|..+|..+-+. ..++.++|..+-.|+..++.||.|||+ ..|||||+||+||||+.+| +
T Consensus 110 FyGa~~regdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~G--q 187 (282)
T KOG0984|consen 110 FYGALFREGDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDG--Q 187 (282)
T ss_pred eehhhhccccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCC--c
Confidence 9999999999999999999888776653 345678999999999999999999998 5899999999999999999 8
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc----ccchhhccccccccccCCchhhhHHHhhcc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ----SMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~----~~~y~~~~d~Ws~G~isnfeyL~~ln~~ag 392 (1566)
+||||||++...... ...+ ..++| -.|||||.+. ...|+-..|+|+.|.- .++...+
T Consensus 188 VKiCDFGIsG~L~dS----iAkt-----~daGC---kpYmaPEri~~e~n~~gY~vksDvWSLGIt-------miElA~l 248 (282)
T KOG0984|consen 188 VKICDFGISGYLVDS----IAKT-----MDAGC---KPYMAPERINPELNQKGYSVKSDVWSLGIT-------MIEMAIL 248 (282)
T ss_pred EEEcccccceeehhh----hHHH-----HhcCC---CccCChhhcCcccCcccceeehhhhhhhhh-------hhhhhhc
Confidence 999999999875531 0011 11223 3599999884 3468889999999954 6777777
Q ss_pred cccCC
Q 000399 393 RRWGD 397 (1566)
Q Consensus 393 rs~~d 397 (1566)
|-+.+
T Consensus 249 r~PY~ 253 (282)
T KOG0984|consen 249 RFPYE 253 (282)
T ss_pred ccccc
Confidence 75544
No 293
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.86 E-value=2.3e-23 Score=239.62 Aligned_cols=197 Identities=17% Similarity=0.158 Sum_probs=158.8
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.+ .+...+|+|.+...... ..++. +|+.+++.++||||+++
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~-------~~~~~~~vK~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~ 66 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTW-------NGTTKVAVKTLKPGTMS---PEAFL--------QEAQIMKKLRHDKLVQL 66 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEE-------cCCceEEEEEecCCccC---HHHHH--------HHHHHHhhCCCCCEeee
Confidence 46899999999999999998774 34567899988754322 23344 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++......++||||+++ +|.+++.......++...++.++.|++.|+.|||++||+||||||+||++++++ .+||
T Consensus 67 ~~~~~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~--~~~l 144 (261)
T cd05034 67 YAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENL--VCKI 144 (261)
T ss_pred eeeeecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCC--CEEE
Confidence 9999988999999999986 999999754444578888999999999999999999999999999999999998 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
+|||+++........ ...+..++..|+|||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 145 ~d~g~~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i-------l~~l~t~g~~ 203 (261)
T cd05034 145 ADFGLARLIEDDEYT----------AREGAKFPIKWTAPEAANYGRFTIKSDVWSFGIL-------LTEIVTYGRV 203 (261)
T ss_pred Cccccceeccchhhh----------hhhccCCCccccCHHHhccCCcCchhHHHHHHHH-------HHHHHhCCCC
Confidence 999998854321000 0011124567999999988888899999999987 555555 554
No 294
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.86 E-value=5.1e-23 Score=239.71 Aligned_cols=198 Identities=18% Similarity=0.218 Sum_probs=156.3
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCC-CCcccCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSV-PGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~i-L~~l~HpNIV~l 240 (1566)
++|++++.||+|+||.||+|.++ .++..||+|.+...... ....+++ +|+.+ ++.++||||+++
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~-~~~~~~~--------~e~~~~~~~~~~~~iv~~ 65 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHV------PTGTIMAVKRIRATVNS-QEQKRLL--------MDLDISMRSVDCPYTVTF 65 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEc------CCCcEEEEEEEecCCCc-HHHHHHH--------HHHHHHHHHcCCCCeeee
Confidence 36899999999999999998863 56899999998764322 2223333 25444 566789999999
Q ss_pred cccccccCceeeeccCCccchhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhc-cccCCCccCCCccccccchhhh
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSL-GIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~-gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++++..++..|+||||++++|.+++... ....+++..++.++.||+.||.|||++ +++||||||+||+++.++ .+
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~--~~ 143 (283)
T cd06617 66 YGALFREGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNG--QV 143 (283)
T ss_pred eEEEecCCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCC--CE
Confidence 9999999999999999999998887642 234578999999999999999999997 999999999999999988 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc----cchhhccccccccccCCchhhhHHHhhccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS----MDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~----~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
||+|||+++..... . ......++..|+|||.+.+ ..++...|.|+.|++ .+..++|+
T Consensus 144 kl~dfg~~~~~~~~-------~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~-------l~~l~~g~ 204 (283)
T cd06617 144 KLCDFGISGYLVDS-------V-----AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGIT-------MIELATGR 204 (283)
T ss_pred EEeecccccccccc-------c-----ccccccCCccccChhhcCCcccccccCccccchhhHHH-------HHHHHhCC
Confidence 99999999854310 0 0011236778999998854 456778999999987 67777787
Q ss_pred cc
Q 000399 394 RW 395 (1566)
Q Consensus 394 s~ 395 (1566)
.+
T Consensus 205 ~p 206 (283)
T cd06617 205 FP 206 (283)
T ss_pred CC
Confidence 53
No 295
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.86 E-value=6.9e-23 Score=238.74 Aligned_cols=198 Identities=22% Similarity=0.241 Sum_probs=160.5
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|.+. .++..+|+|++............+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~vK~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~~ 66 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDR------ETGETVALKKVALRRLEGGIPNQAL--------REIKALQACQHPYVVKLLD 66 (286)
T ss_pred CceEEeecccCCCcEEEEEEEC------CCCceEEEEEEEcccccchhhHHHH--------HHHHHHHhCCCCCCcceee
Confidence 5889999999999999998853 4688999999876543333233344 5999999999999999999
Q ss_pred cccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
++.....+|+||||+.++|.+++.... ..+++..++.++.||+.||.|||++||+|+||||+||+++.++ .++|+||
T Consensus 67 ~~~~~~~~~~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~--~~~l~df 143 (286)
T cd07832 67 VFPHGSGFVLVMEYMPSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADG--VLKIADF 143 (286)
T ss_pred EEecCCeeEEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCC--cEEEeee
Confidence 999999999999999669999987433 5578899999999999999999999999999999999999988 7999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhcccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|+++........ ......++..|+|||++.+. .++.+.|+|+.|++ .+..++|++
T Consensus 144 g~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~-------l~~l~tg~~ 199 (286)
T cd07832 144 GLARLFSEEEPR----------LYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCI-------FAELLNGSP 199 (286)
T ss_pred eecccccCCCCC----------ccccccCcccccCceeeeccccCCchhHHHHHHHH-------HHHHHcCCc
Confidence 999865421110 01112478889999988643 46789999999987 777777754
No 296
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.86 E-value=6.3e-23 Score=236.40 Aligned_cols=200 Identities=20% Similarity=0.167 Sum_probs=161.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
++|++.+.||+|+||.||+|.+. .++..+|+|.++........ ...+. +|+.++++++|+||+++
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~ei~~l~~~~~~~i~~~ 67 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICL------LDGRVVALKKVQIFEMMDAKARQDCL--------KEIDLLKQLDHPNVIKY 67 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEc------CCCCEEEEEEeecccccchhhHHHHH--------HHHHHHHhCCCCCeeee
Confidence 47999999999999999998863 46888999988753332222 23333 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++++...+..++||||+++ +|.+++... ....+++..++.++.|++.||.|||+.||+||||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~--~~ 145 (267)
T cd08224 68 LASFIENNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATG--VV 145 (267)
T ss_pred eeeeecCCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCC--cE
Confidence 9999999999999999996 999988642 234478888999999999999999999999999999999999988 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|+|||+++....... . .....++..|+|||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 146 ~l~d~~~~~~~~~~~~-----~------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~i-------l~~l~~g~~p 205 (267)
T cd08224 146 KLGDLGLGRFFSSKTT-----A------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCL-------LYEMAALQSP 205 (267)
T ss_pred EEeccceeeeccCCCc-----c------cceecCCccccCHHHhccCCCCchhcHHHHHHH-------HHHHHHCCCC
Confidence 9999999875432100 0 011237788999999988888999999999987 6666677643
No 297
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.85 E-value=4.4e-23 Score=238.81 Aligned_cols=198 Identities=13% Similarity=0.137 Sum_probs=157.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.+.|++.+.||+|+||.||+|.+. .++..+|+|.+.... ....++. +|+.+++.+ +||||++
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~~aik~~~~~~---~~~~~~~--------~e~~~l~~~~~h~~i~~ 67 (272)
T cd06637 5 AGIFELVELVGNGTYGQVYKGRHV------KTGQLAAIKVMDVTG---DEEEEIK--------QEINMLKKYSHHRNIAT 67 (272)
T ss_pred hhhhhHHHheeecCCeEEEEEEEc------CCCcEEEEEEEEcCC---ccHHHHH--------HHHHHHHHhcCCCCeee
Confidence 457999999999999999988753 568899999986532 1122233 588888888 6999999
Q ss_pred cccccccc------CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 240 VLGLLKTS------GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 240 l~~~~~~~------~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
+++++... ..+|+||||+++ +|.+++.......+++..++.++.|++.||.|||+++|+||||||+||+++++
T Consensus 68 ~~~~~~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~ 147 (272)
T cd06637 68 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN 147 (272)
T ss_pred EeeEEeecCCCCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCC
Confidence 99998653 468999999996 99999985444567888899999999999999999999999999999999999
Q ss_pred chhhhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-----ccchhhccccccccccCCchhhhHH
Q 000399 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-----SMDWHSQFNRWWRGELSNFEYLLFL 387 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-----~~~y~~~~d~Ws~G~isnfeyL~~l 387 (1566)
+ .+||+|||+++...... . ......|++.|+|||++. ...|+..+|+|+.|++ .+
T Consensus 148 ~--~~~l~Dfg~~~~~~~~~----~-------~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~-------l~ 207 (272)
T cd06637 148 A--EVKLVDFGVSAQLDRTV----G-------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGIT-------AI 207 (272)
T ss_pred C--CEEEccCCCceeccccc----c-------cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHH-------HH
Confidence 8 79999999998543210 0 011234788899999885 3357778999999987 66
Q ss_pred Hhhccccc
Q 000399 388 NKLAGRRW 395 (1566)
Q Consensus 388 n~~agrs~ 395 (1566)
..+.|+.+
T Consensus 208 el~~g~~p 215 (272)
T cd06637 208 EMAEGAPP 215 (272)
T ss_pred HHHhCCCC
Confidence 67777654
No 298
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.85 E-value=8.2e-23 Score=241.75 Aligned_cols=198 Identities=16% Similarity=0.140 Sum_probs=152.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhc-cCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFL-SGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~-~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV 238 (1566)
.++|.+.+.||+|+||.||+|++.-. +.....+..+|+|.+.... ......++. +|+.+++.+ +||||+
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~h~~i~ 87 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLI--------SEMEMMKMIGKHKNII 87 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHH--------HHHHHHHHhcCCCCEe
Confidence 46899999999999999998874210 1112345679999987532 222223333 589999999 799999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCc--------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCcc
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 303 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLK 303 (1566)
++++++...+..|+||||+++ +|.+++.... ...++...++.++.|++.||+|||++|++|||||
T Consensus 88 ~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlk 167 (307)
T cd05098 88 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLA 167 (307)
T ss_pred eEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence 999999999999999999986 9999997432 1236777888999999999999999999999999
Q ss_pred CCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 304 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 304 p~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|+||+++.++ .+||+|||+++......... . .....++..|+|||.+.+..++...|+|+.|++
T Consensus 168 p~Nill~~~~--~~kL~dfg~a~~~~~~~~~~-----~----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~ 231 (307)
T cd05098 168 ARNVLVTEDN--VMKIADFGLARDIHHIDYYK-----K----TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 231 (307)
T ss_pred HHheEEcCCC--cEEECCCcccccccccchhh-----c----cccCCCccceeChHHhccCCCCcHHHHHHHHHH
Confidence 9999999988 79999999988543211000 0 001123467999999988888999999999987
No 299
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.85 E-value=5.5e-23 Score=236.72 Aligned_cols=196 Identities=17% Similarity=0.168 Sum_probs=156.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.+ ..+..+|+|.+....... ..+. +|+.++++++||||+++
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~-------~~~~~~~~k~~~~~~~~~---~~~~--------~E~~~l~~l~~~~i~~~ 66 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTW-------NGNTKVAVKTLKPGTMSP---ESFL--------EEAQIMKKLRHDKLVQL 66 (260)
T ss_pred hHHhhhhheeccccCceEEEEEe-------cCCceeEEEEecCCCCCH---HHHH--------HHHHHHHhcCCCceEEE
Confidence 45799999999999999998864 356678999987643322 2344 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++. .+..|+||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+||++++++ .+||
T Consensus 67 ~~~~~-~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~--~~~l 143 (260)
T cd05070 67 YAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGL--VCKI 143 (260)
T ss_pred EeEEC-CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCc--eEEe
Confidence 99875 4568999999986 999999754444578888999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
+|||+++........ ...+..++..|+|||.+.+..++...|.|+.|++ .+..++ |+.
T Consensus 144 ~dfg~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~-------l~~l~~~g~~ 202 (260)
T cd05070 144 ADFGLARLIEDNEYT----------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL-------LTELVTKGRV 202 (260)
T ss_pred CCceeeeeccCcccc----------cccCCCCCccccChHHHhcCCCcchhhhHHHHHH-------HHHHHhcCCC
Confidence 999999754321000 0112234567999999988888899999999987 566665 553
No 300
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.85 E-value=6.6e-23 Score=240.28 Aligned_cols=205 Identities=17% Similarity=0.181 Sum_probs=156.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|.+.... .......+|+|.+..... .....++. +|+.+++.++||||+++++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~-~~~~~~~~~~k~~~~~~~-~~~~~~~~--------~E~~~l~~l~h~~iv~~~~ 70 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLK-GRAGYTTVAVKMLKENAS-SSELRDLL--------SEFNLLKQVNHPHVIKLYG 70 (290)
T ss_pred CccccccccCcCCcceEEEEEecCC-CCCcceeEEEEecCCCCC-HHHHHHHH--------HHHHHHhhCCCCCEeeEEE
Confidence 4788999999999999998753211 122345688888764322 22223333 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCc----------------------ccccchhHHHHHHHHHHHHHHHHhhccccC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSP----------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAH 299 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~----------------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiH 299 (1566)
.+...+..++||||+++ +|.+++.... ...++...+..++.|++.||.|||+++|+|
T Consensus 71 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH 150 (290)
T cd05045 71 ACSQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVH 150 (290)
T ss_pred EEecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeeh
Confidence 99999999999999996 9999876321 123667788899999999999999999999
Q ss_pred CCccCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccC
Q 000399 300 RSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELS 379 (1566)
Q Consensus 300 rDLKp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~is 379 (1566)
|||||+|||+++++ .+||+|||+++.......... .....++..|+|||.+.+..++...|+|+.|++
T Consensus 151 ~dikp~nill~~~~--~~kl~dfg~~~~~~~~~~~~~---------~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~- 218 (290)
T cd05045 151 RDLAARNVLVAEGR--KMKISDFGLSRDVYEEDSYVK---------RSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVL- 218 (290)
T ss_pred hhhhhheEEEcCCC--cEEeccccccccccCccchhc---------ccCCCCCccccCHHHHccCCcchHhHHHHHHHH-
Confidence 99999999999988 799999999985432111000 011235567999999888888999999999987
Q ss_pred CchhhhHHHhhc-cccc
Q 000399 380 NFEYLLFLNKLA-GRRW 395 (1566)
Q Consensus 380 nfeyL~~ln~~a-grs~ 395 (1566)
.+..++ |+.+
T Consensus 219 ------l~el~t~g~~p 229 (290)
T cd05045 219 ------LWEIVTLGGNP 229 (290)
T ss_pred ------HHHHHhcCCCC
Confidence 566665 5543
No 301
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.85 E-value=6.8e-23 Score=245.81 Aligned_cols=200 Identities=20% Similarity=0.321 Sum_probs=158.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.+. .++..||+|.+..... ......+. +|+.+++.++||||+++
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~------~~~~~vaiK~~~~~~~-~~~~~~~~--------~E~~~l~~l~h~niv~~ 68 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHK------PTGVKVAIKKISPFEH-QTFCQRTL--------REIKILRRFKHENIIGI 68 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEc------CCCCeEEEEEeccccc-chhHHHHH--------HHHHHHHhCCCCCcCch
Confidence 468999999999999999998763 5688999999864211 11122233 59999999999999999
Q ss_pred ccccccc-----CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 241 LGLLKTS-----GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 241 ~~~~~~~-----~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
++++... ...|+||||++++|.+++. ...+++..++.++.|++.||.|||++||+||||||+||+++.++
T Consensus 69 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~---~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~-- 143 (336)
T cd07849 69 LDIIRPPSFESFNDVYIVQELMETDLYKLIK---TQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNC-- 143 (336)
T ss_pred hheeecccccccceEEEEehhcccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCC--
Confidence 9987544 3589999999999888886 34578889999999999999999999999999999999999998
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-ccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
.+||+|||+++......... . ......|++.|+|||.+. ...++...|+|+.|++ .+..++|+.
T Consensus 144 ~~kl~dfg~~~~~~~~~~~~-------~-~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvi-------l~el~~G~~ 208 (336)
T cd07849 144 DLKICDFGLARIADPEHDHT-------G-FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCI-------LAEMLSNRP 208 (336)
T ss_pred CEEECcccceeecccccccc-------C-CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHH-------HHHHHhCCC
Confidence 79999999998643211100 0 112345788999999864 4567889999999987 677778875
Q ss_pred c
Q 000399 395 W 395 (1566)
Q Consensus 395 ~ 395 (1566)
+
T Consensus 209 ~ 209 (336)
T cd07849 209 L 209 (336)
T ss_pred C
Confidence 3
No 302
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.85 E-value=5.2e-23 Score=236.45 Aligned_cols=196 Identities=19% Similarity=0.221 Sum_probs=162.8
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+|++.+.||.|+||.||+|.+. .++..+|+|.+.+..... ...+.+. +|++++++++||||++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 66 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKR------DTKKMFAMKYMNKQKCVEKGSVRNVL--------NERRILQELNHPFLVNLW 66 (258)
T ss_pred CceEEEEeccCCCceEEEEEEc------cCCcEEEEEEEehhhhcchhHHHHHH--------HHHHHHHhCCCCChHHHH
Confidence 4889999999999999998863 468889999998654333 2233333 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+.+....|+||||+.+ +|.+++.. ...+++..+..++.||+.||.|||++|++|+||||+||++++++ .++|+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~--~~~l~ 142 (258)
T cd05578 67 YSFQDEENMYLVVDLLLGGDLRYHLSQ--KVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQG--HVHIT 142 (258)
T ss_pred HhhcCCCeEEEEEeCCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCC--CEEEe
Confidence 999999999999999987 99999974 34678889999999999999999999999999999999999998 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||++....... ......++..|+|||++.+..++...|.|+.|++ .+..++|+.+
T Consensus 143 d~~~~~~~~~~~------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~-------l~~l~~g~~p 198 (258)
T cd05578 143 DFNIATKVTPDT------------LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVT-------AYECLRGKRP 198 (258)
T ss_pred ecccccccCCCc------------cccccCCChhhcCHHHHcccCCCCcccchhhHHH-------HHHHHhCCCC
Confidence 999987544210 0112237778999999988888999999999987 6677778754
No 303
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.85 E-value=7e-23 Score=242.06 Aligned_cols=206 Identities=18% Similarity=0.167 Sum_probs=160.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||++.+.- ......+..+|+|.+..... ......+. +|+.+++++ +||||++
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~-~~~~~~~~~vavK~~~~~~~-~~~~~~~~--------~E~~~l~~l~~h~~iv~ 103 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYG-LSKSDAVMKVAVKMLKPTAH-SSEREALM--------SELKIMSHLGNHENIVN 103 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEec-CCCCCceeEEEEEecCccCC-hHHHHHHH--------HHHHHHHhccCCCCcce
Confidence 4579999999999999999876411 11123466799998765422 12222333 599999999 7999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++++...+..|+||||+++ +|.++++......+++..+..++.|++.||.|||+++|+||||||+|||++.++ .+|
T Consensus 104 ~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~--~~~ 181 (302)
T cd05055 104 LLGACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGK--IVK 181 (302)
T ss_pred EEEEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCC--eEE
Confidence 99999999999999999986 999999743334478889999999999999999999999999999999999888 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
|+|||+++....... ........++..|+|||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 182 l~dfg~~~~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvi-------l~el~t~g~~ 242 (302)
T cd05055 182 ICDFGLARDIMNDSN---------YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIL-------LWEIFSLGSN 242 (302)
T ss_pred ECCCcccccccCCCc---------eeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHH-------HHHHHhCCCC
Confidence 999999985432100 001122346778999999988888999999999987 555555 543
No 304
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.85 E-value=8.7e-23 Score=234.82 Aligned_cols=194 Identities=16% Similarity=0.184 Sum_probs=149.9
Q ss_pred eeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccccC
Q 000399 169 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1566)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~ 248 (1566)
.||+|+||.||+|..+ ...++..+|+|++...........++. +|+.+++.++||||+++++++. .+
T Consensus 2 ~lg~G~~g~v~~~~~~----~~~~~~~~aiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~-~~ 68 (257)
T cd05116 2 ELGSGNFGTVKKGMYK----MKKSEKTVAVKILKNDNNDPALKDELL--------REANVMQQLDNPYIVRMIGICE-AE 68 (257)
T ss_pred cCCCcCCcceEEeEEe----cCCCceEEEEEEccCCCCcHHHHHHHH--------HHHHHHHhCCCCCcceEEEEEc-CC
Confidence 6899999999988532 124577899999865433222233344 5899999999999999999875 45
Q ss_pred ceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCc
Q 000399 249 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1566)
Q Consensus 249 ~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~ 327 (1566)
..++||||+++ +|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+|||+++.
T Consensus 69 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~--~~kl~Dfg~~~~ 144 (257)
T cd05116 69 SWMLVMELAELGPLNKFLQK--NKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQH--YAKISDFGLSKA 144 (257)
T ss_pred CcEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCC--eEEECCCccccc
Confidence 67899999996 89999973 34578889999999999999999999999999999999999988 799999999986
Q ss_pred cccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 328 NSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
........ .......++..|+|||.+....++...|+|+.|++ .+..++ |+.
T Consensus 145 ~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~-------l~el~t~g~~ 197 (257)
T cd05116 145 LGADENYY--------KAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVL-------MWEAFSYGQK 197 (257)
T ss_pred cCCCCCee--------eecCCCCCCccccCHhHhccCCcCchhHHHHHHHH-------HHHHHhCCCC
Confidence 44211100 00111224578999999988888889999999987 566665 543
No 305
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.85 E-value=5.6e-23 Score=237.91 Aligned_cols=193 Identities=19% Similarity=0.136 Sum_probs=144.1
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||+||+|... .+ .....+|+|.+.... .......++ +|+.+++.++||||+++++.+.+.
T Consensus 1 ~~lg~G~fg~v~~~~~~--~~--~~~~~~~~k~~~~~~-~~~~~~~~~--------~e~~~~~~l~h~nii~~~~~~~~~ 67 (269)
T cd05042 1 DEIGNGWFGKVLLGEAH--RG--MSKARVVVKELRASA-TPDEQLLFL--------QEVQPYRELNHPNVLQCLGQCIES 67 (269)
T ss_pred CcCCccCCceEEEEEEe--cC--CCCeEEEEeecCccC-ChHHHHHHH--------HHHHHHHhCCCCCcceEEEEECCC
Confidence 36999999999987531 11 345567888765432 222223344 588999999999999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCcc---cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcC
Q 000399 248 GLITSVIPKTPY-TLENILQFSPN---ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~~---~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFG 323 (1566)
...|+||||+++ +|.+++..... ...++..++.++.||+.||.|||++||+||||||+|||++.++ .+||+|||
T Consensus 68 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~--~~kl~dfg 145 (269)
T cd05042 68 IPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADL--SVKIGDYG 145 (269)
T ss_pred CceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCC--cEEEeccc
Confidence 999999999996 99999974322 2235666788999999999999999999999999999999998 79999999
Q ss_pred CCCccccccccCCCCCCceeeeecCCcccccccccccccc-------cchhhccccccccccCCchhhhHHHhhc
Q 000399 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-------MDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1566)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-------~~y~~~~d~Ws~G~isnfeyL~~ln~~a 391 (1566)
+++.......... .....++..|+|||++.. ..++...|+|+.|++ .+..++
T Consensus 146 ~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~-------l~el~~ 204 (269)
T cd05042 146 LALEQYPEDYYIT---------KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVT-------MWELFT 204 (269)
T ss_pred cccccccchheec---------cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHH-------HHHHHh
Confidence 9875331100000 011235667999998743 356778999999987 555555
No 306
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.85 E-value=7.1e-23 Score=236.81 Aligned_cols=201 Identities=15% Similarity=0.102 Sum_probs=158.9
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccc--cchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES--KNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~--~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
+|+..+.||+|+||.||+|.+. .++..+|+|.+.......... .+.+. +|+.+++.++||||+++
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~~~-------~e~~~l~~l~h~~i~~~ 69 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDV------DTGRELAAKQVQFDPESPETSKEVSALE-------CEIQLLKNLQHERIVQY 69 (266)
T ss_pred CccccceecCCCCEEEEEEEEc------CCCcEEEEEEeecCcCCchhHHHHHHHH-------HHHHHHHHcCCCCeeeE
Confidence 6899999999999999998753 468899999887543222111 11122 69999999999999999
Q ss_pred cccccc--cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 241 LGLLKT--SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 241 ~~~~~~--~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++++.+ ...++++|||+++ +|.+++.. ...+++..++.++.|++.||.|||+++|+||||||+||+++.++ .+
T Consensus 70 ~~~~~~~~~~~~~l~~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~--~~ 145 (266)
T cd06651 70 YGCLRDRAEKTLTIFMEYMPGGSVKDQLKA--YGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAG--NV 145 (266)
T ss_pred EEEEEcCCCCEEEEEEeCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCC--CE
Confidence 999865 3578999999986 99999973 34578888899999999999999999999999999999999988 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+|||+++.......... ......++..|+|||.+.+..++..+|+|+.|++ .+..++|+.+
T Consensus 146 ~l~dfg~~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i-------~~el~~g~~p 208 (266)
T cd06651 146 KLGDFGASKRLQTICMSGT--------GIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCT-------VVEMLTEKPP 208 (266)
T ss_pred EEccCCCccccccccccCC--------ccccCCccccccCHHHhCCCCCCchhhhHHHHHH-------HHHHHHCCCC
Confidence 9999999985432111000 0112347788999999988888899999999987 6777778654
No 307
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.85 E-value=5e-23 Score=236.30 Aligned_cols=183 Identities=19% Similarity=0.168 Sum_probs=153.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.. .+..+|+|.+..... ..+++. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~--------~~~~v~iK~~~~~~~---~~~~~~--------~e~~~l~~l~~~~i~~~ 65 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDY--------RGQKVAVKCLKDDST---AAQAFL--------AEASVMTTLRHPNLVQL 65 (256)
T ss_pred hhhccceeeeecCCCceEEEEEe--------cCcEEEEEEeccchh---HHHHHH--------HHHHHHHhcCCcceeee
Confidence 45799999999999999998874 478899999875432 233444 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.+.+..|+||||+++ +|.++++......+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~--~~~l 143 (256)
T cd05039 66 LGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDL--VAKV 143 (256)
T ss_pred EEEEcCCCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCC--CEEE
Confidence 9999999999999999996 999999754444678889999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
+|||.++....... ....+..|+|||.+....++...|+|+.|++
T Consensus 144 ~d~g~~~~~~~~~~--------------~~~~~~~~~ape~~~~~~~~~~~Di~slG~i 188 (256)
T cd05039 144 SDFGLAKEASQGQD--------------SGKLPVKWTAPEALREKKFSTKSDVWSFGIL 188 (256)
T ss_pred cccccccccccccc--------------cCCCcccccCchhhcCCcCCcHHHHHHHHHH
Confidence 99999986531100 0113456999999988888889999999987
No 308
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.85 E-value=9.8e-23 Score=238.10 Aligned_cols=202 Identities=15% Similarity=0.077 Sum_probs=156.6
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
.|++++.||+|+||.||+|+.. .....++..+|+|.+.... .......+. +|+.+++.++||||+++++
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~--~~~~~~~~~va~K~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~ 73 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYD--PEGDNTGEQVAVKSLKPES-GGNHIADLK--------KEIEILRNLYHENIVKYKG 73 (284)
T ss_pred hhhhceecCCCCceeEEEEEEc--cCCCCccceEEEEEcCccc-cHHHHHHHH--------HHHHHHHhCCCCCeeeeee
Confidence 4789999999999999987632 1123567889999986432 122222333 6999999999999999999
Q ss_pred ccccc--CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 243 LLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 243 ~~~~~--~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++... ...++||||+++ +|.+++... ...++...+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 74 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~--~~~l 150 (284)
T cd05079 74 ICTEDGGNGIKLIMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEH--QVKI 150 (284)
T ss_pred EEecCCCCceEEEEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCC--CEEE
Confidence 98765 578999999986 999998643 23467888899999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
+|||+++........ ........++..|+|||.+.+..++..+|+|+.|++ .+..++++
T Consensus 151 ~dfg~~~~~~~~~~~--------~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~i-------l~ellt~~ 209 (284)
T cd05079 151 GDFGLTKAIETDKEY--------YTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVT-------LYELLTYC 209 (284)
T ss_pred CCCccccccccCccc--------eeecCCCCCCccccCHHHhccCCCCccccchhhhhh-------hhhhhcCC
Confidence 999999864421110 001123346778999999988888899999999988 45555544
No 309
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.85 E-value=7.9e-23 Score=240.92 Aligned_cols=197 Identities=12% Similarity=0.087 Sum_probs=161.5
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
...+|++++.||+|+||.||+|.+. .++..+|+|.+...... ....+. +|+.+++.++||||++
T Consensus 17 ~~~~y~~~~~lg~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~i~~ 80 (297)
T cd06656 17 PKKKYTRFEKIGQGASGTVYTAIDI------ATGQEVAIKQMNLQQQP--KKELII--------NEILVMRENKNPNIVN 80 (297)
T ss_pred hhhhceeeeeeccCCCeEEEEEEEC------CCCCEEEEEEEecCccc--hHHHHH--------HHHHHHHhCCCCCEee
Confidence 3568999999999999999998752 57889999998753322 122233 5889999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++++..++..|+||||+++ +|.+++.. ..+++..+..++.|++.||.|||+.||+||||||+|||++.++ .+|
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~--~~~ 155 (297)
T cd06656 81 YLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDG--SVK 155 (297)
T ss_pred EEEEEecCCEEEEeecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEE
Confidence 99999999999999999987 99998863 3467888899999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||+++....... ......+++.|+|||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 156 l~Dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvi-------l~~l~tg~~p 214 (297)
T cd06656 156 LTDFGFCAQITPEQS-----------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM-------AIEMVEGEPP 214 (297)
T ss_pred ECcCccceEccCCcc-----------CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHH-------HHHHHhCCCC
Confidence 999999875432100 0112347888999999988888899999999988 6667777754
No 310
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.85 E-value=3.8e-23 Score=224.94 Aligned_cols=213 Identities=16% Similarity=0.153 Sum_probs=165.5
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNV 237 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNI 237 (1566)
...++.+.+..||.|+.|.|++++.+ .+|.+.|||.+.+. ...++.++++ +.+.++.+. +.|+|
T Consensus 89 ~dindl~~l~dlGsGtcG~V~k~~~r------s~~~iiAVK~M~rt-~Nkee~kRIL--------mDldvv~~s~dcpyI 153 (391)
T KOG0983|consen 89 ADINDLENLGDLGSGTCGQVWKMRFR------STGHIIAVKQMRRT-GNKEENKRIL--------MDLDVVLKSHDCPYI 153 (391)
T ss_pred cChHHhhhHHhhcCCCccceEEEEEc------ccceEEEEEeeccc-CCHHHHHHHH--------HhhhHHhhccCCCee
Confidence 34567888999999999999998863 67899999999865 2334444444 477766555 48999
Q ss_pred ccccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhh
Q 000399 238 APVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 238 V~l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
|+.+|+|.++..+++.||.|...++.+++.. .++++|..+-.+...+++||.||-+ +||||||+||+|||+|+.| .
T Consensus 154 V~c~GyFi~n~dV~IcMelMs~C~ekLlkri-k~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~G--n 230 (391)
T KOG0983|consen 154 VQCFGYFITNTDVFICMELMSTCAEKLLKRI-KGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG--N 230 (391)
T ss_pred eeeeeEEeeCchHHHHHHHHHHHHHHHHHHh-cCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCC--C
Confidence 9999999999999999999998888887743 4568999999999999999999997 6899999999999999999 6
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc---ccchhhccccccccccCCchhhhHHHhhccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
+|+||||++...... ...+. . .|-+.|||||.+. ...|+-..|+|+.|.- .++..+|+
T Consensus 231 iKlCDFGIsGrlvdS----kAhtr-----s---AGC~~YMaPERidp~~~~kYDiRaDVWSlGIT-------lveLaTg~ 291 (391)
T KOG0983|consen 231 IKLCDFGISGRLVDS----KAHTR-----S---AGCAAYMAPERIDPPDKPKYDIRADVWSLGIT-------LVELATGQ 291 (391)
T ss_pred EEeecccccceeecc----ccccc-----c---cCCccccCccccCCCCCCccchhhhhhhhccc-------hhhhhccc
Confidence 999999999865531 11111 1 2557899999985 4568889999999964 66777777
Q ss_pred ccCCc--cceeecceeE
Q 000399 394 RWGDY--TFHMVMPWVI 408 (1566)
Q Consensus 394 s~~dl--~q~pv~pwv~ 408 (1566)
.+... +.+.++--|+
T Consensus 292 yPy~~c~tdFe~ltkvl 308 (391)
T KOG0983|consen 292 YPYKGCKTDFEVLTKVL 308 (391)
T ss_pred CCCCCCCccHHHHHHHH
Confidence 65433 3344444333
No 311
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.85 E-value=1.1e-22 Score=233.66 Aligned_cols=198 Identities=17% Similarity=0.159 Sum_probs=161.7
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.+. .++..+|+|.+...... ....+. +|+.+++.++||||+++
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~--~~~~~~--------~e~~~l~~~~h~~i~~~ 65 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDI------ATGELVAIKVIKLEPGD--DFEIIQ--------QEISMLKECRHPNIVAY 65 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEec------CCCCEEEEEEEEcCchh--hHHHHH--------HHHHHHHhCCCCChhce
Confidence 357999999999999999998863 45678999998754322 222333 69999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++...+.+|++|||+++ +|.+++... ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 66 ~~~~~~~~~~~l~~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l 142 (262)
T cd06613 66 FGSYLRRDKLWIVMEYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDG--DVKL 142 (262)
T ss_pred EEEEEeCCEEEEEEeCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCC--CEEE
Confidence 9999999999999999997 999988742 24578899999999999999999999999999999999999988 6999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc---chhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM---DWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~---~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||++........ ......++..|+|||++.+. .++..+|+|+.|++ .+.++.|+.+
T Consensus 143 ~d~g~~~~~~~~~~-----------~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~-------l~~~~tg~~p 203 (262)
T cd06613 143 ADFGVSAQLTATIA-----------KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGIT-------AIELAELQPP 203 (262)
T ss_pred Cccccchhhhhhhh-----------ccccccCCccccCchhhcccccCCcCchhhhHHHHHH-------HHHHHhCCCC
Confidence 99999875432100 01123478889999999776 78889999999987 6777777653
No 312
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.85 E-value=7.9e-23 Score=250.83 Aligned_cols=197 Identities=17% Similarity=0.156 Sum_probs=152.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~ 239 (1566)
.++|.+.+.||+|+||.||+|++.- .+....+..||+|++...... .....++ +|+.+|..+. |||||+
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~-~~~~~~~~~vavK~l~~~~~~-~~~~~~~--------~E~~~l~~l~~H~niv~ 105 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHG-LSHSQSTMKVAVKMLKSTARS-SEKQALM--------SELKIMSHLGPHLNIVN 105 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcC-CCCCCCceEEEEEecCCCCCh-hHHHHHH--------HHHHHHHhcCCCCCeEE
Confidence 4578999999999999999987521 011234567999999754222 2122343 5999999997 999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcc------------------------------------------------
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPN------------------------------------------------ 270 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~------------------------------------------------ 270 (1566)
+++++...+.+++||||+++ +|.++++..+.
T Consensus 106 ~~~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (401)
T cd05107 106 LLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDE 185 (401)
T ss_pred EEEEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcc
Confidence 99999999999999999996 99999864221
Q ss_pred ------------------------------------------------cccchhHHHHHHHHHHHHHHHHhhccccCCCc
Q 000399 271 ------------------------------------------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV 302 (1566)
Q Consensus 271 ------------------------------------------------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDL 302 (1566)
..++...+..++.||+.||.|||+++|+||||
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdl 265 (401)
T cd05107 186 SADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDL 265 (401)
T ss_pred ccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccC
Confidence 12445567789999999999999999999999
Q ss_pred cCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 303 CPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 303 Kp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
||+|||++.++ .+||+|||+++......... . .....++..|+|||.+.+..++...|+|+.|++
T Consensus 266 kp~NiLl~~~~--~~kL~DfGla~~~~~~~~~~----~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvi 330 (401)
T cd05107 266 AARNVLICEGK--LVKICDFGLARDIMRDSNYI----S-----KGSTFLPLKWMAPESIFNNLYTTLSDVWSFGIL 330 (401)
T ss_pred CcceEEEeCCC--EEEEEecCcceecccccccc----c-----CCCcCCCCceeChHHhcCCCCCcHhHHHHHHHH
Confidence 99999999887 79999999998543211000 0 011235778999999988888889999999987
No 313
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.85 E-value=1.1e-22 Score=238.63 Aligned_cols=206 Identities=14% Similarity=0.102 Sum_probs=160.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|.+.+.||+|+||.||+|.+.. .....++..+++|.+.... ....+.+. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~-~~~~~~~~~~~~k~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~i~~~ 72 (291)
T cd05094 4 RRDIVLKRELGEGAFGKVFLAECYN-LSPTKDKMLVAVKALKDPT--LAARKDFQ--------REAELLTNLQHEHIVKF 72 (291)
T ss_pred hHHeEEeeeecccCCCeEEEeEeec-cCCCCcceeeEEEecCCcc--HHHHHHHH--------HHHHHHhcCCCCCcceE
Confidence 3578999999999999999887421 1122456678888875432 12222333 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCc--------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCC
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 305 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~ 305 (1566)
++++...+..++||||+++ +|.+++.... .+.++...++.++.||+.||.|||++||+||||||+
T Consensus 73 ~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~ 152 (291)
T cd05094 73 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATR 152 (291)
T ss_pred EEEEccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcc
Confidence 9999999999999999986 9999986421 123677888999999999999999999999999999
Q ss_pred CccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhh
Q 000399 306 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 385 (1566)
Q Consensus 306 NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~ 385 (1566)
|||++.++ .+||+|||+++........ .......++..|+|||.+.+..++...|+|+.|++
T Consensus 153 Nil~~~~~--~~~l~dfg~a~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i------- 214 (291)
T cd05094 153 NCLVGANL--LVKIGDFGMSRDVYSTDYY---------RVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVI------- 214 (291)
T ss_pred eEEEccCC--cEEECCCCcccccCCCcee---------ecCCCCCcceeecChHHhccCCCCchhhHHHHHHH-------
Confidence 99999988 7999999999854321100 01123346788999999988888889999999987
Q ss_pred HHHhhc-cccc
Q 000399 386 FLNKLA-GRRW 395 (1566)
Q Consensus 386 ~ln~~a-grs~ 395 (1566)
.+..++ |+.+
T Consensus 215 l~el~t~g~~p 225 (291)
T cd05094 215 LWEIFTYGKQP 225 (291)
T ss_pred HHHHHhCCCCC
Confidence 666666 6543
No 314
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.85 E-value=4.5e-23 Score=240.60 Aligned_cols=204 Identities=14% Similarity=0.112 Sum_probs=157.7
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|+..++||+|+||.||++.... .....++..+|+|.+.... ......+. +|+++++.++||||++++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~~~~~~~k~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 73 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHN-LLPEQDKMLVAVKALKEAS--ESARQDFQ--------REAELLTVLQHQHIVRFY 73 (280)
T ss_pred HhceeccccCCccCCeEEEeEEec-CCCCCCceEEEEEecCcCC--HHHHHHHH--------HHHHHHhcCCCCCCceEE
Confidence 478889999999999999876321 1112456778999876432 22222333 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcc-------------cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPN-------------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNV 307 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~-------------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NI 307 (1566)
+++...+..++||||+++ +|.+++..... ..++...++.++.|++.|+.|||++||+||||||+||
T Consensus 74 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~ni 153 (280)
T cd05092 74 GVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNC 153 (280)
T ss_pred EEEecCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhE
Confidence 999999999999999986 99999874321 2367788899999999999999999999999999999
Q ss_pred cccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHH
Q 000399 308 LLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFL 387 (1566)
Q Consensus 308 Ll~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~l 387 (1566)
|+++++ .+||+|||+++........ .......+++.|+|||.+.+..++...|+|+.|++ .+
T Consensus 154 l~~~~~--~~kL~dfg~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i-------l~ 215 (280)
T cd05092 154 LVGQGL--VVKIGDFGMSRDIYSTDYY---------RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVV-------LW 215 (280)
T ss_pred EEcCCC--CEEECCCCceeEcCCCcee---------ecCCCccccccccCHHHhccCCcCchhhHHHHHHH-------HH
Confidence 999988 7999999999754321000 01112235678999999988889999999999987 56
Q ss_pred Hhhc-ccc
Q 000399 388 NKLA-GRR 394 (1566)
Q Consensus 388 n~~a-grs 394 (1566)
..++ |+.
T Consensus 216 el~~~g~~ 223 (280)
T cd05092 216 EIFTYGKQ 223 (280)
T ss_pred HHHcCCCC
Confidence 6665 544
No 315
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.85 E-value=4.8e-23 Score=237.82 Aligned_cols=199 Identities=19% Similarity=0.154 Sum_probs=160.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
++|++.+.||+|+||.||+|.+. .++..+|||.+....... ....++. +|+.+++.++||||+++
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~------~~~~~~~vK~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~ 67 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCL------LDGVPVALKKVQIFDLMDAKARADCI--------KEIDLLKQLNHPNVIKY 67 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeec------CCCceEEEEeeeehhhhhHHHHHHHH--------HHHHHHHHccCCchhhh
Confidence 57899999999999999998853 468899999877543222 2223344 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++++..++..++||||+++ +|.+++... ....+++..++.++.||+.||.|||++|++|+||||+||+++.++ .+
T Consensus 68 ~~~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~--~~ 145 (267)
T cd08229 68 YASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATG--VV 145 (267)
T ss_pred hheeEeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--CE
Confidence 9999999999999999997 999988632 234578888999999999999999999999999999999999988 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+|+|||+++....... ......++..|+|||.+.+..++...|+|+.|++ .+..++|..
T Consensus 146 ~l~dfg~~~~~~~~~~-----------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~i-------l~~l~~g~~ 204 (267)
T cd08229 146 KLGDLGLGRFFSSKTT-----------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCL-------LYEMAALQS 204 (267)
T ss_pred EECcchhhhccccCCc-----------ccccccCCcCccCHHHhcCCCccchhhHHHHHHH-------HHHHHhCCC
Confidence 9999999875432100 0112247788999999988888889999999987 556666654
No 316
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.85 E-value=3.3e-23 Score=243.92 Aligned_cols=210 Identities=17% Similarity=0.171 Sum_probs=162.6
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
...+.++||+|-||+|.+|.- +.+..||+|.++.+ .......+|+ +|+++|.+|+|||||+|+|
T Consensus 539 ~L~~~ekiGeGqFGEVhLCev-------eg~lkVAVK~Lr~~-a~~~~r~~F~--------kEIkiLsqLkhPNIveLvG 602 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEV-------EGPLKVAVKILRPD-ATKNARNDFL--------KEIKILSRLKHPNIVELLG 602 (807)
T ss_pred heehhhhhcCcccceeEEEEe-------cCceEEEEeecCcc-cchhHHHHHH--------HHHHHHhccCCCCeeEEEe
Confidence 577899999999999999883 45799999999875 3334445666 4999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
+|..++.+++|+||+++ +|.+++..+............|+.||++||+||.+.++|||||.+.|+|++.++ ++||||
T Consensus 603 VC~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~--~iKiad 680 (807)
T KOG1094|consen 603 VCVQDDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEF--TIKIAD 680 (807)
T ss_pred eeecCCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcc--cEEecC
Confidence 99999999999999995 999999865333333344456999999999999999999999999999999999 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccccCCccce
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFH 401 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~dl~q~ 401 (1566)
||++|..-..+.+..+.. .+-...|||+|.+.-.+++.+.|.|..|+- -||..+ ...-++|.+++..
T Consensus 681 fgmsR~lysg~yy~vqgr---------~vlpiRwmawEsillgkFttaSDvWafgvT-lwE~~~---~C~e~Py~~lt~e 747 (807)
T KOG1094|consen 681 FGMSRNLYSGDYYRVQGR---------AVLPIRWMAWESILLGKFTTASDVWAFGVT-LWEVFM---LCREQPYSQLTDE 747 (807)
T ss_pred cccccccccCCceeeecc---------eeeeeeehhHHHHHhccccchhhhhhhHHH-HHHHHH---HHhhCchhhhhHH
Confidence 999995432222211111 223456999999888899999999999964 233222 2233556555544
Q ss_pred ee
Q 000399 402 MV 403 (1566)
Q Consensus 402 pv 403 (1566)
.+
T Consensus 748 ~v 749 (807)
T KOG1094|consen 748 QV 749 (807)
T ss_pred HH
Confidence 33
No 317
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.85 E-value=1.4e-22 Score=236.43 Aligned_cols=199 Identities=15% Similarity=0.151 Sum_probs=151.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhh----ccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCC
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCV----LGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 236 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~----~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpN 236 (1566)
.++|++++.||+|+||+||+|... .++. .+++|.+... .......++. .|+.+++.++|||
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~------~~~~~~~~~~~~k~~~~~-~~~~~~~~~~--------~~~~~l~~l~h~~ 70 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWI------PEGDSIKIPVAIKTIQDR-SGRQTFQEIT--------DHMLAMGSLDHAY 70 (279)
T ss_pred HhhceeccccCccCCcceEEEEEc------CCCCceeeEEEEeecccc-cchHHHHHHH--------HHHHHHhcCCCCC
Confidence 357999999999999999988742 2333 4666765432 1111122222 4777889999999
Q ss_pred cccccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 237 IV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
|+++++++.. ...++|+||+++ +|.+++... ...+++..++.++.||+.||.|||++|++||||||+|||++.++
T Consensus 71 iv~~~~~~~~-~~~~~i~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~-- 146 (279)
T cd05111 71 IVRLLGICPG-ASLQLVTQLSPLGSLLDHVRQH-RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDS-- 146 (279)
T ss_pred cceEEEEECC-CccEEEEEeCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC--
Confidence 9999998754 567889999985 999999742 34578888999999999999999999999999999999999988
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
.+||+|||+++......... ......++..|+|||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 147 ~~kl~Dfg~~~~~~~~~~~~---------~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i-------l~el~t~g~~ 210 (279)
T cd05111 147 IVQIADFGVADLLYPDDKKY---------FYSEHKTPIKWMALESILFGRYTHQSDVWSYGVT-------VWEMMSYGAE 210 (279)
T ss_pred cEEEcCCccceeccCCCccc---------ccCCCCCcccccCHHHhccCCcCchhhHHHHHHH-------HHHHHcCCCC
Confidence 79999999998543211100 1112346678999999988889999999999987 555655 554
No 318
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.85 E-value=7.7e-23 Score=239.94 Aligned_cols=198 Identities=18% Similarity=0.188 Sum_probs=158.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.+.|++++.||.|+||.||+|++. .++..+|+|.+... .......+. +|+.+++.++||||+++
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~------~~~~~~~~k~~~~~--~~~~~~~~~--------~e~~~l~~l~h~~i~~~ 74 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNK------ETGALAAAKVIETK--SEEELEDYM--------VEIEILATCNHPYIVKL 74 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEEC------CCCceEEEEEeccC--CHHHHHHHH--------HHHHHHHhCCCCcEeee
Confidence 357999999999999999998863 46788999998653 222233344 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+..++.+|+||||+++ +|..++.. ....+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 75 ~~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~--~~kl 151 (292)
T cd06644 75 LGAFYWDGKLWIMIEFCPGGAVDAIMLE-LDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDG--DIKL 151 (292)
T ss_pred EEEEEeCCeEEEEEecCCCCcHHHHHHh-hcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCC--CEEE
Confidence 9999999999999999997 78777753 234578889999999999999999999999999999999999888 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-----ccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-----SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-----~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+|||++........ ......+++.|+|||++. ...++...|+|+.|++ .+..+.|+.
T Consensus 152 ~dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~i-------l~el~~g~~ 213 (292)
T cd06644 152 ADFGVSAKNVKTLQ-----------RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGIT-------LIEMAQIEP 213 (292)
T ss_pred ccCccceecccccc-----------ccceecCCccccCceeeccccccCCCCCchhhhHhHHHH-------HHHHhcCCC
Confidence 99999875331100 011223778899999884 3446778999999988 666777765
Q ss_pred c
Q 000399 395 W 395 (1566)
Q Consensus 395 ~ 395 (1566)
+
T Consensus 214 p 214 (292)
T cd06644 214 P 214 (292)
T ss_pred C
Confidence 4
No 319
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.85 E-value=4.3e-23 Score=237.79 Aligned_cols=195 Identities=16% Similarity=0.168 Sum_probs=153.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||+|.+ ..+..+|+|.+...... ...+. +|+.+++.++||||++++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~-------~~~~~~~lK~~~~~~~~---~~~~~--------~E~~~l~~l~h~~i~~~~ 67 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTW-------NGTTKVAIKTLKPGTMM---PEAFL--------QEAQIMKKLRHDKLVPLY 67 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEE-------cCCceEEEEEcccCCcc---HHHHH--------HHHHHHHhCCCCCeeeEE
Confidence 5799999999999999998874 23345899987653221 12333 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++. .+..++||||+++ +|.+++.......++...+..++.|++.||.|||++||+||||||+||++++++ .+||+
T Consensus 68 ~~~~-~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~--~~~l~ 144 (260)
T cd05069 68 AVVS-EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNL--VCKIA 144 (260)
T ss_pred EEEc-CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCC--eEEEC
Confidence 9875 4568899999986 999999754444567888899999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
|||+++........ ......++..|+|||...+..++..+|+|+.|++ .+..++ |+.
T Consensus 145 dfg~~~~~~~~~~~----------~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~-------l~el~t~g~~ 202 (260)
T cd05069 145 DFGLARLIEDNEYT----------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGIL-------LTELVTKGRV 202 (260)
T ss_pred CCccceEccCCccc----------ccCCCccchhhCCHHHhccCCcChHHHHHHHHHH-------HHHHHhCCCC
Confidence 99999754321100 0112235667999999988888889999999987 555665 554
No 320
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.85 E-value=9.2e-23 Score=237.54 Aligned_cols=194 Identities=20% Similarity=0.217 Sum_probs=148.7
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++++.||+|+||+||+|++.- .+ ......||+|.+.... ......++. +|+.+++.++||||+++
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~-~~-~~~~~~va~K~~~~~~-~~~~~~~~~--------~e~~~l~~~~~~~i~~~ 74 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIP-DG-ENVKIPVAIKVLRENT-SPKANKEIL--------DEAYVMAGVGSPYVCRL 74 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEec-CC-CccceEEEEEEecCCC-CHHHHHHHH--------HHHHHHHhcCCCCCceE
Confidence 4579999999999999999987421 01 0112347899876432 222223333 58889999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.. ...+++|||+++ +|.++++.. ...+++..+..++.||+.||.|||+++|+||||||+|||+++++ .+||
T Consensus 75 ~~~~~~-~~~~l~~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~--~~kL 150 (279)
T cd05109 75 LGICLT-STVQLVTQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPN--HVKI 150 (279)
T ss_pred EEEEcC-CCcEEEEEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCC--cEEE
Confidence 999875 457889999986 999998742 34578889999999999999999999999999999999999888 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
+|||+++........ .......++..|++||.+.+..++..+|+|+.|++
T Consensus 151 ~dfG~~~~~~~~~~~---------~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~ 200 (279)
T cd05109 151 TDFGLARLLDIDETE---------YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVT 200 (279)
T ss_pred CCCCceeecccccce---------eecCCCccchhhCCHHHhccCCCCchhHHHHHHHH
Confidence 999999865421100 00011124567999999988889999999999987
No 321
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.85 E-value=5.6e-23 Score=218.56 Aligned_cols=183 Identities=20% Similarity=0.279 Sum_probs=146.5
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNV 237 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNI 237 (1566)
...++|++++++|+|-|++||.|.. ..+...++||+++.-+. ++.. ||+.||+.|. ||||
T Consensus 35 g~~ddYeivrk~GRGKYSEVFeg~~------~~~~eK~ViKiLKPVkk-----kKIk--------REikIL~nL~gg~NI 95 (338)
T KOG0668|consen 35 GNQDDYEIVRKVGRGKYSEVFEGIN------ITNNEKCVIKILKPVKK-----KKIK--------REIKILQNLRGGPNI 95 (338)
T ss_pred cccchHHHHHHHcCccHhhHhcccc------cCCCceEEEeeechHHH-----HHHH--------HHHHHHHhccCCCCe
Confidence 3467999999999999999999985 35667777888765321 1222 7999999997 9999
Q ss_pred cccccccccc--CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch
Q 000399 238 APVLGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1566)
Q Consensus 238 V~l~~~~~~~--~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~ 314 (1566)
+.|+++..++ ....||+||+.+ +...+.. .++..+++++++|++.||.|||++||+|||+||.|++|+....
T Consensus 96 i~L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~r 170 (338)
T KOG0668|consen 96 IKLLDIVKDPESKTPSLIFEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELR 170 (338)
T ss_pred eehhhhhcCccccCchhHhhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhc
Confidence 9999999875 467899999998 4444332 3788899999999999999999999999999999999998774
Q ss_pred hhhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-ccchhhcccccccccc
Q 000399 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 315 ~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~y~~~~d~Ws~G~i 378 (1566)
.++|+|.|+|.+.....+ ...+ +.+..|..||++- -..|+-..|+|+.||+
T Consensus 171 -kLrlIDWGLAEFYHp~~e----YnVR--------VASRyfKGPELLVdy~~YDYSLD~WS~Gcm 222 (338)
T KOG0668|consen 171 -KLRLIDWGLAEFYHPGKE----YNVR--------VASRYFKGPELLVDYQMYDYSLDMWSLGCM 222 (338)
T ss_pred -eeeeeecchHhhcCCCce----eeee--------eehhhcCCchheeechhccccHHHHHHHHH
Confidence 899999999997663221 1122 2556789999875 4567888999999997
No 322
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.85 E-value=1.1e-22 Score=235.45 Aligned_cols=192 Identities=16% Similarity=0.153 Sum_probs=145.8
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
|.+.+.||+|+||.||+|.... ......+|+|.+............+. +|+.+|+.++||||++++++
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~----~~~~~~~a~k~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv~~~~~ 68 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQ----DDSILKVAVKTMKIAICTRSEMEDFL--------SEAVCMKEFDHPNVMRLIGV 68 (272)
T ss_pred CccccccCcccCceEEEeEEcc----CCCeeeEEEEecccCcCCHHHHHHHH--------HHHHHHHhCCCCCcceEEEE
Confidence 3567899999999999987531 11223689998765433333333344 58999999999999999997
Q ss_pred cccc------CceeeeccCCcc-chhhhhccC----cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 244 LKTS------GLITSVIPKTPY-TLENILQFS----PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 244 ~~~~------~~l~LV~E~~~g-sL~~~l~~~----~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
+... ...++||||+++ +|.+++... ....+++..+..++.|++.||.|||+++|+||||||+|||++.+
T Consensus 69 ~~~~~~~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~ 148 (272)
T cd05075 69 CLQTVESEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNEN 148 (272)
T ss_pred EccCCcccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCC
Confidence 6432 257899999986 998887432 12346788889999999999999999999999999999999988
Q ss_pred chhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
+ .+||+|||+++........ . ......+++.|++||.+.+..++...|+|+.|++
T Consensus 149 ~--~~kl~Dfg~~~~~~~~~~~------~---~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~i 203 (272)
T cd05075 149 M--NVCVADFGLSKKIYNGDYY------R---QGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVT 203 (272)
T ss_pred C--CEEECCCCcccccCcccce------e---cCCcccCCcccCCHHHccCCCcChHHHHHHHHHH
Confidence 8 7999999999864421100 0 0011235667999999998889999999999987
No 323
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.85 E-value=1e-22 Score=250.86 Aligned_cols=201 Identities=15% Similarity=0.155 Sum_probs=165.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.+.|++.+.||.|.||.||+++++ .++...|+|++.......++. . .|.++|+.. .|||++.
T Consensus 18 ~d~~ei~evig~Gtygkv~k~k~~------~~~~~aa~kI~~~~~d~deEi----E-------~eynil~~~~~hpnv~~ 80 (953)
T KOG0587|consen 18 ADIFEIIEVIGNGTYGKVYKGRHV------KTGQLAAIKIMDPTEDEEEEI----E-------LEYNMLKKYSHHPNVAT 80 (953)
T ss_pred CCccEEEEEEeeccceeEEEEeee------ecCceeeeEeecCCccccHHH----H-------HHHHHHHhccCCCCcce
Confidence 457999999999999999998863 678889999987643332221 1 377788777 5999999
Q ss_pred ccccccc-----cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc
Q 000399 240 VLGLLKT-----SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 240 l~~~~~~-----~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~ 313 (1566)
+|++|.. ++.+|||||||.| +.-|+++......+.+..+.+|++.++.|+.+||.+.+||||||-.|||++.++
T Consensus 81 fyg~~~k~~~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~ 160 (953)
T KOG0587|consen 81 FYGAFIKKDPGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENA 160 (953)
T ss_pred EEEEEEEecCCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccC
Confidence 9999864 4689999999996 999999977677789999999999999999999999999999999999999999
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-----ccchhhccccccccccCCchhhhHHH
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-----SMDWHSQFNRWWRGELSNFEYLLFLN 388 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-----~~~y~~~~d~Ws~G~isnfeyL~~ln 388 (1566)
.|||+|||++....... -...+|+|||+|||||++. ...|+..+|.|+.|.. .++
T Consensus 161 --~VKLvDFGvSaQldsT~-----------grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGIT-------aIE 220 (953)
T KOG0587|consen 161 --EVKLVDFGVSAQLDSTV-----------GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGIT-------AIE 220 (953)
T ss_pred --cEEEeeeeeeeeeeccc-----------ccccCcCCCcccccceeeecccCCCCCcccccchhhccce-------eeh
Confidence 79999999998655211 1234578999999999985 3458889999999976 777
Q ss_pred hhccccc-CCc
Q 000399 389 KLAGRRW-GDY 398 (1566)
Q Consensus 389 ~~agrs~-~dl 398 (1566)
+..|.++ .|+
T Consensus 221 ladG~PPl~Dm 231 (953)
T KOG0587|consen 221 MAEGAPPLCDM 231 (953)
T ss_pred hcCCCCCccCc
Confidence 8778664 443
No 324
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.85 E-value=4.8e-23 Score=241.93 Aligned_cols=186 Identities=18% Similarity=0.200 Sum_probs=159.2
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
...-.+||-|.||+||.|..+ .-...||||.++.+.+ ...+|++ |+.+|+.++|||+|+|+|+
T Consensus 269 ItMkhKLGGGQYGeVYeGvWK------kyslTvAVKtLKEDtM---eveEFLk--------EAAvMKeikHpNLVqLLGV 331 (1157)
T KOG4278|consen 269 ITMKHKLGGGQYGEVYEGVWK------KYSLTVAVKTLKEDTM---EVEEFLK--------EAAVMKEIKHPNLVQLLGV 331 (1157)
T ss_pred eeeeeccCCCcccceeeeeee------ccceeeehhhhhhcch---hHHHHHH--------HHHHHHhhcCccHHHHhhh
Confidence 345678999999999998864 3457799999986543 4567885 9999999999999999999
Q ss_pred ccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 244 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
|..+..+|||+|||.+ +|.+||+.+.+..++.-...+++.||.+||+||..+++|||||...|+|+.++. .+||+||
T Consensus 332 CT~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnh--iVKvADF 409 (1157)
T KOG4278|consen 332 CTHEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH--IVKVADF 409 (1157)
T ss_pred hccCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccc--eEEeecc
Confidence 9999999999999995 999999998888888888889999999999999999999999999999999998 8999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|++|.+.+..... ..+..-..-|.|||-+....+..+.|+|..|++
T Consensus 410 GLsRlMtgDTYTA----------HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVL 455 (1157)
T KOG4278|consen 410 GLSRLMTGDTYTA----------HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVL 455 (1157)
T ss_pred chhhhhcCCceec----------ccCccCcccccCcccccccccccchhhHHHHHH
Confidence 9999877533221 111123345899999999999999999999987
No 325
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.85 E-value=5.6e-23 Score=236.84 Aligned_cols=185 Identities=15% Similarity=0.152 Sum_probs=143.0
Q ss_pred eeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccccC
Q 000399 169 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1566)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~ 248 (1566)
.||+|+||.||+|.... ...+..+|+|++.... ......++. +|+.+++.++||||+++++++. ..
T Consensus 2 ~ig~G~~g~v~~~~~~~----~~~~~~vavk~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~ii~~~~~~~-~~ 67 (257)
T cd05115 2 ELGSGNFGCVKKGVYKM----RKKQIDVAIKVLKNEN-EKSVRDEMM--------REAEIMHQLDNPYIVRMIGVCE-AE 67 (257)
T ss_pred ccCCCCcccEEEEEEec----CCCceeEEEEEccccc-ChHHHHHHH--------HHHHHHHhcCCCCeEEEEEEEc-CC
Confidence 48999999999876421 1345679999886532 222223343 5999999999999999999885 45
Q ss_pred ceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCc
Q 000399 249 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1566)
Q Consensus 249 ~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~ 327 (1566)
..++||||+++ +|.+++... ...+++..++.++.|++.||.|||++|++||||||+|||++.++ .+||+|||+++.
T Consensus 68 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~--~~kl~dfg~~~~ 144 (257)
T cd05115 68 ALMLVMEMASGGPLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQH--YAKISDFGLSKA 144 (257)
T ss_pred CeEEEEEeCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCC--cEEeccCCcccc
Confidence 78999999986 999998732 34578899999999999999999999999999999999999988 799999999985
Q ss_pred cccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 328 NSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
........ .. .....++..|+|||.+....++...|+|+.|++
T Consensus 145 ~~~~~~~~---~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~ 187 (257)
T cd05115 145 LGADDSYY---KA-----RSAGKWPLKWYAPECINFRKFSSRSDVWSYGIT 187 (257)
T ss_pred ccCCccce---ec-----cCCCCCCcccCCHHHHccCCCCchhhHHHHHHH
Confidence 33211100 00 011123567999999988888889999999987
No 326
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.85 E-value=9.3e-23 Score=237.89 Aligned_cols=197 Identities=15% Similarity=0.147 Sum_probs=156.7
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+.|++.+.||+|+||.||+|.+. .++..+++|.+.... ......+. +|+++++.++||||++++
T Consensus 5 ~~~~i~~~lg~g~~g~v~~~~~~------~~~~~~~~k~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~ii~~~ 68 (282)
T cd06643 5 EFWEIIGELGDGAFGKVYKAQNK------ETGVLAAAKVIDTKS--EEELEDYM--------VEIDILASCDHPNIVKLL 68 (282)
T ss_pred HHHHHHhhcccCCCeEEEEEEEC------CCCeEEEEEEeCCCC--HHHHHHHH--------HHHHHHHHCCCCCeeeEE
Confidence 35789999999999999998763 467788999875432 22233344 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++...+..|+||||+++ +|..++.. ....+++..++.++.|++.||.|||+.||+||||||+||+++.++ .+||+
T Consensus 69 ~~~~~~~~~~~v~e~~~~~~l~~~~~~-~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~--~~kl~ 145 (282)
T cd06643 69 DAFYYENNLWILIEFCAGGAVDAVMLE-LERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDG--DIKLA 145 (282)
T ss_pred EEEeeCCEEEEEEEecCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCC--CEEEc
Confidence 999999999999999997 88887753 234578889999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-----ccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-----SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-----~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... ......++..|+|||++. +..++..+|+|+.|++ .+..+.|+.+
T Consensus 146 dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi-------l~el~~g~~p 207 (282)
T cd06643 146 DFGVSAKNTRTIQ-----------RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT-------LIEMAQIEPP 207 (282)
T ss_pred ccccccccccccc-----------ccccccccccccCHhhccccCCCCCCCCccchhhhHHHH-------HHHHccCCCC
Confidence 9999875432100 011234788899999983 4456778999999988 5666666643
No 327
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.85 E-value=9e-23 Score=240.27 Aligned_cols=199 Identities=18% Similarity=0.191 Sum_probs=151.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l 240 (1566)
++|++.+.||+|+||.||+|..+. ......+++|.++.. ........+. +|+.++.++ +||||+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~----~~~~~~~~ik~~~~~-~~~~~~~~~~--------~E~~~l~~l~~hp~iv~~ 68 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKK----DGLKMNAAIKMLKEF-ASENDHRDFA--------GELEVLCKLGHHPNIINL 68 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecC----CCCcceeEEEEcccc-CCHHHHHHHH--------HHHHHHHhhcCCCchhhe
Confidence 579999999999999999887521 011234677776532 1122222333 589999889 79999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCc--------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCC
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 305 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~ 305 (1566)
++++...+.+|+||||+++ +|.+++.... ...++...++.++.|++.||+|||++||+||||||+
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~ 148 (297)
T cd05089 69 LGACENRGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAAR 148 (297)
T ss_pred EEEEccCCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcc
Confidence 9999999999999999986 9999986422 124677888999999999999999999999999999
Q ss_pred CccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhh
Q 000399 306 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLL 385 (1566)
Q Consensus 306 NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~ 385 (1566)
|||++.++ .+||+|||+++...... .. .....+..|+|||.+.+..++...|+|+.|++
T Consensus 149 Nill~~~~--~~kl~dfg~~~~~~~~~------~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~i------- 207 (297)
T cd05089 149 NVLVGENL--ASKIADFGLSRGEEVYV------KK------TMGRLPVRWMAIESLNYSVYTTKSDVWSFGVL------- 207 (297)
T ss_pred eEEECCCC--eEEECCcCCCcccccee------cc------CCCCcCccccCchhhccCCCCchhhHHHHHHH-------
Confidence 99999988 79999999987432100 00 00113446999999988889999999999987
Q ss_pred HHHhhc-ccc
Q 000399 386 FLNKLA-GRR 394 (1566)
Q Consensus 386 ~ln~~a-grs 394 (1566)
.+..++ |+.
T Consensus 208 l~el~t~g~~ 217 (297)
T cd05089 208 LWEIVSLGGT 217 (297)
T ss_pred HHHHHcCCCC
Confidence 566664 543
No 328
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.85 E-value=4.8e-23 Score=239.66 Aligned_cols=196 Identities=14% Similarity=0.134 Sum_probs=160.4
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+.|+..+.||+|+||.||+|.+. .++..+|+|.+...... .....+. +|+.+++.++||||++++
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~------~~~~~vaiK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~i~~~~ 68 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDN------RTKEVVAIKIIDLEEAE-DEIEDIQ--------QEITVLSQCDSPYITRYY 68 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEc------CCCeEEEEEEeccccch-HHHHHHH--------HHHHHHHcCCCCccHhhh
Confidence 46888999999999999998753 46788999987644221 1222233 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+..+...|+||||+++ +|.+++.. ..+++..++.++.|++.|+.|||++|++|+||||+||+++.++ .+||+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~--~~~l~ 143 (277)
T cd06642 69 GSYLKGTKLWIIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQG--DVKLA 143 (277)
T ss_pred cccccCCceEEEEEccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCC--CEEEc
Confidence 999999999999999997 99988862 3578888999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... ......++..|+|||.+.+..++..+|.|+.|++ .+..+.|+.+
T Consensus 144 dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i-------l~el~tg~~p 200 (277)
T cd06642 144 DFGVAGQLTDTQI-----------KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGIT-------AIELAKGEPP 200 (277)
T ss_pred cccccccccCcch-----------hhhcccCcccccCHHHhCcCCCchhhhHHHHHHH-------HHHHHhCCCC
Confidence 9999875442100 0112247788999999998888899999999987 6667788775
No 329
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.85 E-value=1.2e-22 Score=234.57 Aligned_cols=201 Identities=14% Similarity=0.104 Sum_probs=158.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccc---cccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKAS---GQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~---~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
.+|++.+.||+|+||.||+|.+. .++..+|+|.+...... .+....+. +|++++++++||||+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~~~--------~ei~~l~~l~h~~i~ 67 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDA------DTGRELAVKQVPFDPDSQETSKEVNALE--------CEIQLLKNLRHDRIV 67 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEc------CCCCEEEEEEEecCcccchhhHHHHHHH--------HHHHHHHHcCCCCcc
Confidence 36999999999999999998863 46889999987543211 11112222 699999999999999
Q ss_pred ccccccccc--CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 239 PVLGLLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 239 ~l~~~~~~~--~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
++++++.+. ..+++||||+++ +|.+++.. .+.+++..++.++.|++.||.|||++||+||||||+||+++.++
T Consensus 68 ~~~~~~~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~-- 143 (264)
T cd06653 68 QYYGCLRDPEEKKLSIFVEYMPGGSIKDQLKA--YGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAG-- 143 (264)
T ss_pred eEEEEEEcCCCCEEEEEEEeCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--
Confidence 999998664 468899999987 99999873 34477888899999999999999999999999999999999988
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
.++|+|||+++.......... ......++..|+|||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 144 ~~~l~dfg~~~~~~~~~~~~~--------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i-------l~~l~~g~~p 208 (264)
T cd06653 144 NVKLGDFGASKRIQTICMSGT--------GIKSVTGTPYWMSPEVISGEGYGRKADVWSVACT-------VVEMLTEKPP 208 (264)
T ss_pred CEEECccccccccccccccCc--------cccccCCcccccCHhhhcCCCCCccccHHHHHHH-------HHHHHhCCCC
Confidence 799999999986542110000 0112347888999999988888889999999987 6667777654
No 330
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.85 E-value=1.2e-22 Score=236.49 Aligned_cols=184 Identities=16% Similarity=0.113 Sum_probs=140.4
Q ss_pred eeeecchhhHHHHHhhhccC------------------CcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCC
Q 000399 169 FIGICSYSIFEELASNFLSG------------------CLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPG 230 (1566)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~------------------~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~ 230 (1566)
.||+|+||.||+|......+ .......+|+|++..... ....++. +|+.+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~--~~~~~~~--------~~~~~~~ 71 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR--DIALAFF--------ETASLMS 71 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH--HHHHHHH--------HHHHHHh
Confidence 69999999999987421100 112235578888764321 1122333 5888999
Q ss_pred cccCCCcccccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccc
Q 000399 231 CLRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1566)
Q Consensus 231 ~l~HpNIV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl 309 (1566)
.++||||+++++++..+...++||||+++ +|..++.. ..+.+++..+..++.||+.||.|||++||+||||||+|||+
T Consensus 72 ~l~h~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill 150 (274)
T cd05076 72 QVSHIHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRK-EKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILL 150 (274)
T ss_pred cCCCCCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEE
Confidence 99999999999999999999999999997 89888863 23457888889999999999999999999999999999999
Q ss_pred cccch-----hhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhcccccccccc
Q 000399 310 TDSCW-----SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGEL 378 (1566)
Q Consensus 310 ~~~~~-----~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~i 378 (1566)
+..+. ..+|++|||++...... ....++..|+|||.+.+ ..++...|+|+.|++
T Consensus 151 ~~~~~~~~~~~~~kl~d~g~~~~~~~~---------------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~ 210 (274)
T cd05076 151 ARLGLAEGTSPFIKLSDPGVSFTALSR---------------EERVERIPWIAPECVPGGNSLSTAADKWSFGTT 210 (274)
T ss_pred eccCcccCccceeeecCCccccccccc---------------cccccCCcccCchhhcCCCCCCcHHHHHHHHHH
Confidence 86531 14799999998643210 01125677999998865 567889999999986
No 331
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.85 E-value=1.5e-22 Score=237.95 Aligned_cols=198 Identities=16% Similarity=0.148 Sum_probs=151.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhcc--------CCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLS--------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL 232 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~--------~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l 232 (1566)
..+|++.+.||+|+||.||+|++.-.. ........+|+|.+.... .......+. +|+++|+++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~--------~ei~~l~~l 74 (295)
T cd05097 4 RQQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV-TKTARNDFL--------KEIKIMSRL 74 (295)
T ss_pred hHhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC-CHHHHHHHH--------HHHHHHHhC
Confidence 357999999999999999998752100 001123458999886532 222222333 599999999
Q ss_pred cCCCcccccccccccCceeeeccCCcc-chhhhhccCcc----------cccchhHHHHHHHHHHHHHHHHhhccccCCC
Q 000399 233 RHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPN----------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRS 301 (1566)
Q Consensus 233 ~HpNIV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~----------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrD 301 (1566)
+||||+++++++...+..++||||+++ +|.+++..... ..++...+..++.|++.||.|||++|++|||
T Consensus 75 ~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~d 154 (295)
T cd05097 75 KNPNIIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRD 154 (295)
T ss_pred CCCCcCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccc
Confidence 999999999999999999999999997 99998863210 1256677788999999999999999999999
Q ss_pred ccCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 302 VCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 302 LKp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||+||+++.++ .+||+|||+++....... ........++..|+|||.+.+..++...|+|+.|++
T Consensus 155 lkp~Nill~~~~--~~kl~dfg~~~~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~ 220 (295)
T cd05097 155 LATRNCLVGNHY--TIKIADFGMSRNLYSGDY---------YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVT 220 (295)
T ss_pred cChhhEEEcCCC--cEEecccccccccccCcc---------eeccCcCcCceeecChhhhccCCcCchhhHHHHHHH
Confidence 999999999888 799999999985432100 001112235678999999988889999999999987
No 332
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.85 E-value=6.9e-23 Score=234.12 Aligned_cols=191 Identities=16% Similarity=0.157 Sum_probs=149.8
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||.||+|.. .++..+|+|.+.... .......+. +|+++++.++||||+++++++...
T Consensus 1 ~~ig~g~~g~vy~~~~-------~~~~~~a~K~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~ 64 (250)
T cd05085 1 ELLGKGNFGEVFKGTL-------KDKTPVAVKTCKEDL-PQELKIKFL--------SEARILKQYDHPNIVKLIGVCTQR 64 (250)
T ss_pred CccCCCCCceEEEEEe-------cCCcEEEEEecCCcC-CHHHHHHHH--------HHHHHHHhCCCCCcCeEEEEEecC
Confidence 3689999999998864 457789999876532 111122333 599999999999999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCC
Q 000399 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~ 326 (1566)
+..++||||+++ +|.+++... ...+.+..+..++.|++.||.|||++|++||||||+||+++.++ .+||+|||+++
T Consensus 65 ~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~--~~~l~d~g~~~ 141 (250)
T cd05085 65 QPIYIVMELVPGGDFLSFLRKK-KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENN--VLKISDFGMSR 141 (250)
T ss_pred CccEEEEECCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCC--eEEECCCccce
Confidence 999999999986 999988643 23467888899999999999999999999999999999999988 79999999987
Q ss_pred ccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
........ . .....++..|+|||++.+..++...|+|+.|++ .+..++ |+.
T Consensus 142 ~~~~~~~~----~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~l-------l~~~~~~g~~ 193 (250)
T cd05085 142 QEDDGIYS----S------SGLKQIPIKWTAPEALNYGRYSSESDVWSYGIL-------LWETFSLGVC 193 (250)
T ss_pred eccccccc----c------CCCCCCcccccCHHHhccCCCCchhHHHHHHHH-------HHHHhcCCCC
Confidence 53311000 0 001123566999999988888889999999987 556565 553
No 333
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.85 E-value=1.7e-22 Score=233.47 Aligned_cols=203 Identities=15% Similarity=0.175 Sum_probs=156.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|+..+.||+|+||.||+|++.. .......+|+|.+.... ......++. +|+++++.++||||++++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~---~~~~~~~~~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 72 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKM---PGRKEVAVAIKTLKPGY-TEKQRQDFL--------SEASIMGQFSHHNIIRLE 72 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEec---CCCCceEEEEEeccccC-CHHHHHHHH--------HHHHHHhcCCCCCeeEEE
Confidence 478889999999999999988531 11234578999886532 122223344 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++...+..|+||||+++ +|.+++... .+.++...+..++.|++.|+.|||++|++||||||+||+++.++ .+||+
T Consensus 73 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~--~~kl~ 149 (268)
T cd05063 73 GVVTKFKPAMIITEYMENGALDKYLRDH-DGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNL--ECKVS 149 (268)
T ss_pred EEEccCCCcEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCC--cEEEC
Confidence 999999999999999997 999998742 34578888899999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
|||+++......... . .......+..|+|||++.+..++...|+|+.|++ .+..++ |+.
T Consensus 150 dfg~~~~~~~~~~~~------~--~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~i-------l~ell~~g~~ 209 (268)
T cd05063 150 DFGLSRVLEDDPEGT------Y--TTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIV-------MWEVMSFGER 209 (268)
T ss_pred CCccceecccccccc------e--eccCCCcCceecCHHHhhcCCcChHhHHHHHHHH-------HHHHHhCCCC
Confidence 999987544211100 0 0011123456999999988888999999999987 555554 553
No 334
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.85 E-value=1.1e-22 Score=233.41 Aligned_cols=199 Identities=17% Similarity=0.156 Sum_probs=162.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||++++. .++..+|+|.+...........++. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSK------EDGKQYVIKEINISKMSPKEREESR--------KEVAVLSNMKHPNIVQYQE 66 (256)
T ss_pred CceEEEEeccCCceEEEEEEEc------CCCCEEEEEEEEhHhCChHHHHHHH--------HHHHHHHhCCCCCeeeeEe
Confidence 5899999999999999988753 4678899999875433333333444 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++...+..|+||||+++ +|.+++.......+++..++.++.|++.||.|||++|++|+||+|+||+++.++ .++|+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~--~~~l~d 144 (256)
T cd08218 67 SFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG--TIKLGD 144 (256)
T ss_pred eecCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCC--CEEEee
Confidence 99999999999999986 999998754444568888899999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||++........ ....+.|++.|+|||++.+..++...|+|+.|++ .+..++|+.+
T Consensus 145 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i-------~~~l~~g~~~ 200 (256)
T cd08218 145 FGIARVLNSTVE-----------LARTCIGTPYYLSPEICENRPYNNKSDIWALGCV-------LYEMCTLKHA 200 (256)
T ss_pred ccceeecCcchh-----------hhhhccCCccccCHHHhCCCCCCCccchhHHHHH-------HHHHHcCCCC
Confidence 999975432100 0112347888999999988888889999999987 6666677654
No 335
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.85 E-value=1.3e-22 Score=240.93 Aligned_cols=198 Identities=16% Similarity=0.172 Sum_probs=152.0
Q ss_pred hcccccceeeeecchhhHHHHHhhhc-cCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFL-SGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~-~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV 238 (1566)
.++|.+.+.||+|+||.||+|++... +........+|+|.+.... ......++. +|+.+++.+ +||||+
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~~iv 81 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLI--------SEMELMKLIGKHKNII 81 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHH--------HHHHHHHhccCCCCee
Confidence 46899999999999999999864210 0112345678999876532 222223334 588999999 699999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCc--------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCcc
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVC 303 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLK 303 (1566)
++++++...+.+|+||||+++ +|.+++.... ...++...+..++.||+.||.|||++||+|||||
T Consensus 82 ~~~~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlk 161 (314)
T cd05099 82 NLLGVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLA 161 (314)
T ss_pred eEEEEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccc
Confidence 999999999999999999986 9999996421 1346777788899999999999999999999999
Q ss_pred CCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 304 PSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 304 p~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|+|||++.++ .+||+|||+++......... . .....++..|+|||++.+..++...|+|+.|++
T Consensus 162 p~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~----~-----~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~ 225 (314)
T cd05099 162 ARNVLVTEDN--VMKIADFGLARGVHDIDYYK----K-----TSNGRLPVKWMAPEALFDRVYTHQSDVWSFGIL 225 (314)
T ss_pred ceeEEEcCCC--cEEEcccccccccccccccc----c-----cccCCCCccccCHHHHccCCcCccchhhHHHHH
Confidence 9999999988 79999999998654211100 0 000113457999999988888999999999987
No 336
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.85 E-value=1.4e-21 Score=243.41 Aligned_cols=212 Identities=22% Similarity=0.381 Sum_probs=181.6
Q ss_pred cccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccce
Q 000399 1279 LMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1566)
Q Consensus 1279 ~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tV 1355 (1566)
...|.+-||+ +...+.. +++||.|+++++||..++ +..++.||.+.|.++...+ ..+++||. |.+|
T Consensus 245 l~GH~g~V~~l~~~~~~~~-----lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~--~~~~sgs~----D~tV 313 (537)
T KOG0274|consen 245 LVGHFGGVWGLAFPSGGDK-----LVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDP--FLLVSGSR----DNTV 313 (537)
T ss_pred ccCCCCCceeEEEecCCCE-----EEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccC--ceEeeccC----CceE
Confidence 6679999999 3334555 999999999999998876 8999999999999998754 46777777 9999
Q ss_pred eeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCC
Q 000399 1356 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1433 (1566)
Q Consensus 1356 rlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~ 1433 (1566)
++|++.+++++.++.||.++|++|... +..++|| |++|++||+.++++++++.+|
T Consensus 314 kVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH--------------------- 370 (537)
T KOG0274|consen 314 KVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSGH--------------------- 370 (537)
T ss_pred EEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecCC---------------------
Confidence 999999999999999999999999876 7778777 999999999999999999886
Q ss_pred CCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCC-ceeeeeccCCcccCchhhHHHhhccCC
Q 000399 1434 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGS 1512 (1566)
Q Consensus 1434 ~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg-~~l~~~~~h~~~v~~~~~V~sv~~s~~ 1512 (1566)
+..|.++.+.+. ..+++|+.|++|++||+++. +|+.++.+|.. .|.++.
T Consensus 371 ---------~~~V~sl~~~~~-----------~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~------~v~~l~---- 420 (537)
T KOG0274|consen 371 ---------TGRVYSLIVDSE-----------NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTS------LVSSLL---- 420 (537)
T ss_pred ---------cceEEEEEecCc-----------ceEEeeeeccceEeecCCchhhhhhhhcCCcc------cccccc----
Confidence 455777766541 59999999999999999999 99999998843 333332
Q ss_pred CcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeec-cCceeeEeeee
Q 000399 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA-HDGYVTKVRII 1563 (1566)
Q Consensus 1513 ~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~g-H~~~V~~Vafs 1563 (1566)
..++.|++++.|+.|++||..+++++.++.+ |.+.|..+++.
T Consensus 421 ---------~~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~ 463 (537)
T KOG0274|consen 421 ---------LRDNFLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALG 463 (537)
T ss_pred ---------cccceeEeccccccEEEeecccCceeeeeccCCcccEEEeecC
Confidence 3457899999999999999999999999999 67889888874
No 337
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.85 E-value=1.5e-22 Score=236.17 Aligned_cols=199 Identities=22% Similarity=0.270 Sum_probs=159.5
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|.++ .++..+|+|.+............+. +|+++++.++||||+++++
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~------~~~~~v~vK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 67 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNK------ATGEIVAIKKFKESEDDEDVKKTAL--------REVKVLRQLRHENIVNLKE 67 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeC------CCCcEEEEehhhhhcccccchhHHH--------HHHHHHHhcCCCCeeehhh
Confidence 6999999999999999998763 4678999999876433332223333 5999999999999999999
Q ss_pred cccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
++..++..++||||+++++.+.+.. ....+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||+||
T Consensus 68 ~~~~~~~~~iv~e~~~~~~l~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~--~~kl~d~ 144 (288)
T cd07833 68 AFRRKGRLYLVFEYVERTLLELLEA-SPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESG--VLKLCDF 144 (288)
T ss_pred eEEECCEEEEEEecCCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--CEEEEee
Confidence 9999999999999999854444432 234478889999999999999999999999999999999999988 7999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhccccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+++........ ......++..|+|||++.+. .++...|+|+.|++ .+..+.|+.+
T Consensus 145 g~~~~~~~~~~~----------~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~-------l~~l~~g~~~ 201 (288)
T cd07833 145 GFARALRARPAS----------PLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCI-------MAELLDGEPL 201 (288)
T ss_pred ecccccCCCccc----------cccCcccccCCcCCchhcCCCCcCchhhHHHHHHH-------HHHHHhCCCC
Confidence 999865531110 01123477889999999877 78889999999987 6677777653
No 338
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.85 E-value=1.1e-22 Score=243.94 Aligned_cols=197 Identities=16% Similarity=0.147 Sum_probs=150.4
Q ss_pred cccccceeeeecchhhHHHHHhhhc-cCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFL-SGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~-~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.+|++++.||+|+||.||+|++.-. +........+|+|.+.... ......++. +|+.+++++ +||||++
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~~iv~ 82 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDA-TDKDLSDLV--------SEMEMMKMIGKHKNIIN 82 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEccccc-CHHHHHHHH--------HHHHHHHhhcCCCCeee
Confidence 3799999999999999998864210 0111234468999876432 222233344 599999999 7999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCc--------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccC
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCP 304 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp 304 (1566)
+++++...+.+|+||||+++ +|.+++.... ...++...+..++.|++.||.|||++||+||||||
T Consensus 83 ~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp 162 (334)
T cd05100 83 LLGACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAA 162 (334)
T ss_pred eeEEEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeecccccc
Confidence 99999999999999999986 9999987421 12355667788999999999999999999999999
Q ss_pred CCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 305 SNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 305 ~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
+|||++.++ .+||+|||+++......... ......++..|+|||++.+..++...|+|+.|++
T Consensus 163 ~Nill~~~~--~~kL~Dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 225 (334)
T cd05100 163 RNVLVTEDN--VMKIADFGLARDVHNIDYYK---------KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 225 (334)
T ss_pred ceEEEcCCC--cEEECCcccceecccccccc---------cccCCCcCceEcCHHHhccCCcCchhhhHHHHHH
Confidence 999999988 79999999998544211100 0011124567999999998889999999999987
No 339
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.85 E-value=2.1e-22 Score=237.23 Aligned_cols=196 Identities=13% Similarity=0.109 Sum_probs=161.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++.+.||.|+||.||+|.+. .++..+|+|.+..... .....+. +|+.+++.++||||+++
T Consensus 18 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~v~iK~~~~~~~--~~~~~~~--------~e~~~l~~l~h~~iv~~ 81 (296)
T cd06655 18 KKKYTRYEKIGQGASGTVFTAIDV------ATGQEVAIKQINLQKQ--PKKELII--------NEILVMKELKNPNIVNF 81 (296)
T ss_pred cceEEEEEEEecCCCeEEEEEEEc------CCCcEEEEEEEecccC--chHHHHH--------HHHHHHHhcCCCceeee
Confidence 457999999999999999988753 5788899999865322 1222333 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+...+..|+|+||+++ +|..++.. ..+++..+..++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~--~~kl 156 (296)
T cd06655 82 LDSFLVGDELFVVMEYLAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDG--SVKL 156 (296)
T ss_pred eeeEecCceEEEEEEecCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEE
Confidence 9999999999999999987 99988862 3478889999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++....... ......++..|+|||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 157 ~dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvi-------l~~lltg~~p 214 (296)
T cd06655 157 TDFGFCAQITPEQS-----------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM-------AIEMVEGEPP 214 (296)
T ss_pred ccCccchhcccccc-----------cCCCcCCCccccCcchhcCCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 99999885432110 0112347888999999988888899999999988 6677778754
No 340
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.85 E-value=1.3e-22 Score=236.14 Aligned_cols=208 Identities=15% Similarity=0.057 Sum_probs=156.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|.+.+.||+|+||.||+|.+.. .........+|+|.+.... .......++ +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~-~~~~~~~~~v~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~i~~~ 74 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRG-RDGDAVELQVAVKTLPESC-SEQDESDFL--------MEALIMSKFNHQNIVRL 74 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEec-CCCCCCceeEEEEEcCCCC-CHHHHHHHH--------HHHHHHHhCCCCCEeeE
Confidence 3579999999999999999987531 0111256778899875432 122223344 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcc-----cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPN-----ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~-----~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~ 314 (1566)
++++.+.+..++||||+++ +|.+++..... ..+++..+..++.||+.||.|||+++++||||||+||+++.++.
T Consensus 75 ~~~~~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~ 154 (277)
T cd05036 75 IGVSFERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGP 154 (277)
T ss_pred EEEEccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCC
Confidence 9999999999999999986 99999864321 24677888999999999999999999999999999999987542
Q ss_pred -hhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-c
Q 000399 315 -SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-G 392 (1566)
Q Consensus 315 -~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-g 392 (1566)
..+||+|||+++......... .......+..|+|||++.+..++...|+|+.|++ .+..++ |
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~i-------l~el~~~g 218 (277)
T cd05036 155 GRVAKIADFGMARDIYRASYYR---------KGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVL-------LWEIFSLG 218 (277)
T ss_pred CcceEeccCccccccCCcccee---------cCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHH-------HHHHHcCC
Confidence 258999999998653211000 0001123457999999988889999999999988 555554 5
Q ss_pred cc
Q 000399 393 RR 394 (1566)
Q Consensus 393 rs 394 (1566)
+.
T Consensus 219 ~~ 220 (277)
T cd05036 219 YM 220 (277)
T ss_pred CC
Confidence 43
No 341
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.85 E-value=1.7e-22 Score=235.82 Aligned_cols=202 Identities=16% Similarity=0.136 Sum_probs=154.1
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|++++.||+|+||.||+|..+. -...++..+|+|.+.... ......+. +|+++|+.++||||++++
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~--~~~~~~~~v~iK~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~iv~~~ 71 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDP--LQDNTGEVVAVKKLQHST--AEHLRDFE--------REIEILKSLQHDNIVKYK 71 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecC--CcCCCCcEEEEEEeccCC--HHHHHHHH--------HHHHHHHhCCCCCeeEEE
Confidence 378999999999999999875310 012467889999976532 22222333 599999999999999999
Q ss_pred ccccc--cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 242 GLLKT--SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 242 ~~~~~--~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++.. ...+++||||+++ +|.+++... ...++...++.++.|++.||.|||++||+||||||+||+++.++ .+|
T Consensus 72 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~--~~~ 148 (284)
T cd05081 72 GVCYSAGRRNLRLVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESEN--RVK 148 (284)
T ss_pred EEEccCCCCceEEEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCC--eEE
Confidence 98643 3478999999986 999999742 23468888899999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
|+|||+++........ .. ......++..|+|||++.+..++..+|+|+.|++ .+..+.|.
T Consensus 149 l~dfg~~~~~~~~~~~-------~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~-------l~el~~~~ 208 (284)
T cd05081 149 IGDFGLTKVLPQDKEY-------YK-VREPGESPIFWYAPESLTESKFSVASDVWSFGVV-------LYELFTYS 208 (284)
T ss_pred ECCCcccccccCCCcc-------ee-ecCCCCCceEeeCHHHhccCCcChHHHHHHHHHH-------HHHHhhcC
Confidence 9999999865421110 00 0011123456999999988888999999999987 55555554
No 342
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.85 E-value=1.7e-22 Score=234.02 Aligned_cols=196 Identities=18% Similarity=0.121 Sum_probs=146.6
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||.||+|... ...++..+|+|.+..... ......+. +|+.+++.++||||+++++++.+.
T Consensus 1 ~~lg~G~~g~Vy~~~~~----~~~~~~~~~~k~~~~~~~-~~~~~~~~--------~E~~~l~~l~h~~iv~~~~~~~~~ 67 (269)
T cd05087 1 KEIGNGWFGKVILGEVN----SGYTPAQVVVKELRVSAS-VQEQMKFL--------EEAQPYRSLQHSNLLQCLGQCTEV 67 (269)
T ss_pred CcccccCCceEEEEEEc----CCCCceEEEEEecCCCCC-hHHHHHHH--------HHHHHHHhCCCCCEeeEEEEEcCC
Confidence 46899999999988642 123456789998765421 22223344 599999999999999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCcc---cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcC
Q 000399 248 GLITSVIPKTPY-TLENILQFSPN---ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~~---~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFG 323 (1566)
...++||||+++ +|.+++..... ...+...++.++.|++.||.|||++|++||||||+||+++.++ .+||+|||
T Consensus 68 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~--~~kL~dfg 145 (269)
T cd05087 68 TPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADL--TVKIGDYG 145 (269)
T ss_pred CCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCC--cEEECCcc
Confidence 999999999996 99999974221 2345556778999999999999999999999999999999988 79999999
Q ss_pred CCCccccccccCCCCCCceeeeecCCccccccccccccccc-------chhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-------DWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-------~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
+++........ .......++..|+|||++.+. .++.+.|+|+.|++ .+..+. |+.
T Consensus 146 ~~~~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~-------l~el~~~g~~ 208 (269)
T cd05087 146 LSHNKYKEDYY---------VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVT-------IWELFELGSQ 208 (269)
T ss_pred ccccccCccee---------ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHH-------HHHHHhCCCC
Confidence 98743211000 001122367789999998642 35678999999987 555553 664
No 343
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.85 E-value=1.2e-22 Score=234.93 Aligned_cols=185 Identities=16% Similarity=0.161 Sum_probs=141.0
Q ss_pred eeeeecchhhHHHHHhhhcc------CCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 168 AFIGICSYSIFEELASNFLS------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~------~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+.||+|+||.||+|+..... ........+++|.+.... ......+. +|+.+++.++||||++++
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~--------~~~~~l~~l~hp~iv~~~ 70 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFF--------ETASMMRQVSHKHIVLLY 70 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHH--------HHHHHHHhCCCCCEeeEE
Confidence 46899999999998742100 011234457788765432 11122233 588899999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch-----h
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-----S 315 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~-----~ 315 (1566)
+++..+...++||||+++ +|..++.. ....+++..++.++.||+.||.|||++||+||||||+|||++.++. .
T Consensus 71 ~~~~~~~~~~lv~e~~~~~~l~~~~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~ 149 (262)
T cd05077 71 GVCVRDVENIMVEEFVEFGPLDLFMHR-KSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGP 149 (262)
T ss_pred EEEecCCCCEEEEecccCCCHHHHHHh-cCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCc
Confidence 999999999999999997 88777763 2345788889999999999999999999999999999999987652 1
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-ccchhhcccccccccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~y~~~~d~Ws~G~i 378 (1566)
.+|++|||++..... ...+.++..|+|||.+. +..++..+|+|+.|++
T Consensus 150 ~~~l~d~g~~~~~~~---------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~ 198 (262)
T cd05077 150 FIKLSDPGIPITVLS---------------RQECVERIPWIAPECVEDSKNLSIAADKWSFGTT 198 (262)
T ss_pred eeEeCCCCCCccccC---------------cccccccccccChhhhcCCCCCCchhHHHHHHHH
Confidence 279999999875331 11234677899999886 5668889999999987
No 344
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.84 E-value=1.5e-22 Score=231.91 Aligned_cols=200 Identities=15% Similarity=0.121 Sum_probs=162.0
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|.++ .++..+|+|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~E~~~l~~~~h~~i~~~~~ 66 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAK------SDSEHCVIKEIDLTKMPVKEKEASK--------KEVILLAKMKHPNIVTFFA 66 (257)
T ss_pred CceEEEEecCCCcceEEEEEEc------CCCceEEEEEeeHhhccchhhHHHH--------HHHHHHHhCCCCChhhhhh
Confidence 5889999999999999998863 4678899999876433333323333 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+...+..|+|+||+++ +|.+++.......+++..++.++.|++.||.|||+++|+||||||+||++++++. .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~-~~~l~d 145 (257)
T cd08225 67 SFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGM-VAKLGD 145 (257)
T ss_pred eeccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCC-eEEecc
Confidence 99999999999999987 9999997544445788889999999999999999999999999999999998762 469999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||.+........ ....+.|++.|+|||.+.+..++...|.|+.|++ .+..+.|+.+
T Consensus 146 ~~~~~~~~~~~~-----------~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~i-------l~~l~~g~~p 201 (257)
T cd08225 146 FGIARQLNDSME-----------LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCV-------LYELCTLKHP 201 (257)
T ss_pred cccchhccCCcc-----------cccccCCCccccCHHHHcCCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 999875432100 1123458889999999988788889999999987 5666667643
No 345
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.84 E-value=1.3e-22 Score=236.76 Aligned_cols=197 Identities=19% Similarity=0.278 Sum_probs=156.9
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||+|.++ .++..+|+|.+.+........+.+. +|+++|+.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 66 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHK------ETGQIVAIKKFLESEDDKMVKKIAM--------REIRMLKQLRHENLVNLI 66 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEEC------CCCCEEEEEeHhhccCcchhhHHHH--------HHHHHHHhcCCcchhhHH
Confidence 36899999999999999998853 4578899998765433222222233 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+++..|+||||+++ +|..+... ...++...++.++.||+.||.|||++||+||||||+||++++++ .+||+
T Consensus 67 ~~~~~~~~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~--~~~l~ 142 (286)
T cd07846 67 EVFRRKKRLYLVFEFVDHTVLDDLEKY--PNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSG--VVKLC 142 (286)
T ss_pred HhcccCCeEEEEEecCCccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCC--cEEEE
Confidence 999999999999999998 67666552 23478888999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|||+++....... ......++..|+|||++.+ ..++...|+|+.|++ .+..++|++
T Consensus 143 dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~-------l~el~~g~~ 199 (286)
T cd07846 143 DFGFARTLAAPGE-----------VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCL-------VTEMLTGEP 199 (286)
T ss_pred eeeeeeeccCCcc-----------ccCcccceeeccCcHHhccccccCchHhHHHHHHH-------HHHHHcCCC
Confidence 9999885432100 0122347788999998865 346678999999987 677777764
No 346
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.84 E-value=2e-22 Score=234.71 Aligned_cols=204 Identities=18% Similarity=0.193 Sum_probs=156.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|++.+.||+|+||.||+|..+. .+ ......+|+|.+..... .....++. +|+.+|+.++||||+++
T Consensus 6 ~~~~~~~~~ig~g~~g~v~~~~~~~-~~-~~~~~~~aik~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~i~~~ 74 (279)
T cd05057 6 ETELEKIKVLGSGAFGTVYKGVWIP-EG-EKVKIPVAIKVLREETS-PKANKEIL--------DEAYVMASVDHPHVVRL 74 (279)
T ss_pred HHHcEEcceecCCCCccEEEEEEec-CC-CCcceEEEEEeccCCCC-HHHHHHHH--------HHHHHHHhCCCCCcceE
Confidence 3579999999999999999887531 01 11234688888765422 22223333 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++.+ ...++||||+++ +|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.++ .+||
T Consensus 75 ~~~~~~-~~~~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~--~~kL 150 (279)
T cd05057 75 LGICLS-SQVQLITQLMPLGCLLDYVRNH-KDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQ--HVKI 150 (279)
T ss_pred EEEEec-CceEEEEecCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCC--eEEE
Confidence 999987 789999999986 999999743 33478889999999999999999999999999999999999888 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-cccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs~ 395 (1566)
+|||+++......... ......++..|+|||.+....++...|.|+.|++ .+..++ |+.+
T Consensus 151 ~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~-------l~el~~~g~~p 211 (279)
T cd05057 151 TDFGLAKLLDVDEKEY---------HAEGGKVPIKWMALESILHRIYTHKSDVWSYGVT-------VWELMTFGAKP 211 (279)
T ss_pred CCCcccccccCcccce---------ecCCCcccccccCHHHhhcCCcCchhhHHHHHHH-------HHHHhcCCCCC
Confidence 9999998654211100 0111224567999999988888899999999987 555555 5543
No 347
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.84 E-value=1.7e-22 Score=237.93 Aligned_cols=216 Identities=13% Similarity=0.015 Sum_probs=146.7
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhh-hcCCCCCCCCCCCCcccCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLR-LIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~-~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.+|++.+.||+|+||.||+|.+. .....+..+|+|+...............+ ......+++...+..++|+||+++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~---~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~ 88 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCA---SDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKY 88 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEc---CCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcE
Confidence 47999999999999999998752 11111455666653322111100000000 000001123344567789999999
Q ss_pred cccccccC----ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 241 LGLLKTSG----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 241 ~~~~~~~~----~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
++++.... ..+++||++..++.+++.. ....++..++.++.|++.||.|||+++|+||||||+|||++.++ .
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~--~ 164 (294)
T PHA02882 89 YGCGSFKRCRMYYRFILLEKLVENTKEIFKR--IKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNN--R 164 (294)
T ss_pred EEeeeEecCCceEEEEEEehhccCHHHHHHh--hccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--c
Confidence 99765543 4578889887777777763 22346777889999999999999999999999999999999888 7
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+||+|||+|+.......... .. ........||+.|+|||+..+..++...|+|+.|++ .+..+.|+.+
T Consensus 165 ~~l~DFGla~~~~~~~~~~~-~~---~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~-------l~el~~g~~P 232 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIE-YS---KEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYC-------MLKWAGIKLP 232 (294)
T ss_pred EEEEEcCCceeeccCCcccc-cc---cccccccCCCccccCHHHhCCCCCCcHHHHHHHHHH-------HHHHHhCCCC
Confidence 99999999986532111000 00 001122358999999999999999999999999987 5666667543
No 348
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.84 E-value=3e-22 Score=229.75 Aligned_cols=190 Identities=18% Similarity=0.228 Sum_probs=153.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||++. .++..+|+|.+.... ....+. +|+.+++.++||||+++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~--------~~~~~~~iK~~~~~~----~~~~~~--------~e~~~l~~~~~~~i~~~ 64 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGE--------YTGQKVAVKNIKCDV----TAQAFL--------EETAVMTKLHHKNLVRL 64 (254)
T ss_pred HHHceeeeeeccCCCCceEecc--------cCCCceEEEeecCcc----hHHHHH--------HHHHHHHhCCCCCcCeE
Confidence 4679999999999999999876 356779999876431 112333 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++++..+ ..++||||+++ +|.+++.......++...+..++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 65 ~~~~~~~-~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~--~~kl 141 (254)
T cd05083 65 LGVILHN-GLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDG--VAKV 141 (254)
T ss_pred EEEEcCC-CcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCC--cEEE
Confidence 9998654 57999999986 999999754444578888899999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
+|||+++...... .....+..|+|||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 142 ~Dfg~~~~~~~~~--------------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~-------l~el~~~g~~ 196 (254)
T cd05083 142 SDFGLARVGSMGV--------------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVL-------LWEVFSYGRA 196 (254)
T ss_pred CCCccceeccccC--------------CCCCCCceecCHHHhccCCcCchhhHHHHHHH-------HHHHHhCCCC
Confidence 9999987533110 01123456999999988888999999999987 555554 554
No 349
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.84 E-value=2.7e-22 Score=230.26 Aligned_cols=198 Identities=17% Similarity=0.138 Sum_probs=154.2
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||.||+|.+.. .......+|+|.+...... ...+++. +|+.++++++||||+++++.+..
T Consensus 1 ~~ig~g~~~~v~~~~~~~---~~~~~~~vaiK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~~- 67 (257)
T cd05040 1 KKLGDGSFGVVRRGEWST---SGGKVIPVAVKCLKSDKLS-DIMDDFL--------KEAAIMHSLDHENLIRLYGVVLT- 67 (257)
T ss_pred CcCCccCcccEEeeeEec---CCCCceEEEEeecCCcccH-HHHHHHH--------HHHHHHhhcCCCCccceeEEEcC-
Confidence 468999999999988631 1123446899998765433 2233343 59999999999999999999988
Q ss_pred CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCC
Q 000399 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~ 326 (1566)
...++||||+++ +|.+++.......++...++.++.|++.||.|||++|++||||||+||+++.++ .+||+|||+++
T Consensus 68 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~--~~kl~dfg~~~ 145 (257)
T cd05040 68 HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDD--KVKIGDFGLMR 145 (257)
T ss_pred CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCC--EEEeccccccc
Confidence 889999999986 999999754324578888899999999999999999999999999999999998 79999999998
Q ss_pred ccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-cccc
Q 000399 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRRW 395 (1566)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs~ 395 (1566)
......... . ......++..|+|||.+.+..++...|+|+.|++ .+.+++ |+.+
T Consensus 146 ~~~~~~~~~-----~---~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~-------l~el~t~g~~p 200 (257)
T cd05040 146 ALPQNEDHY-----V---MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVT-------LWEMFTYGEEP 200 (257)
T ss_pred cccccccce-----e---cccCCCCCceecCHHHhcccCcCchhhhHHHHHH-------HHHHHhCCCCC
Confidence 654211100 0 0112236677999999988889999999999987 556655 5543
No 350
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.84 E-value=4.3e-22 Score=238.33 Aligned_cols=188 Identities=15% Similarity=0.182 Sum_probs=160.2
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
...++|+++..+|.|+||.||+++++ .++...|+|+++...... -..++ +|+-+++.++|||||
T Consensus 12 nP~ddyellqrvgsgTygdvyKaRd~------~s~elaavkvVkLep~dd---~~~iq-------qei~~~~dc~h~niv 75 (829)
T KOG0576|consen 12 NPQDDYELLQRVGSGTYGDVYKARDK------RSGELAAVKVVKLEPGDD---FSGIQ-------QEIGMLRDCRHPNIV 75 (829)
T ss_pred CCccchhheeeecCCcccchhhhccc------ccCchhhheeeeccCCcc---ccccc-------cceeeeecCCCcChH
Confidence 44678999999999999999999985 578999999988643221 12222 799999999999999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
.+++.+...+.++++||||++ +|.++.+ -.+++++.++.++.++.++|++|||++|-+|||||-.|||+++.+ .+
T Consensus 76 ay~gsylr~dklwicMEycgggslQdiy~--~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~g--Dv 151 (829)
T KOG0576|consen 76 AYFGSYLRRDKLWICMEYCGGGSLQDIYH--VTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEG--DV 151 (829)
T ss_pred HHHhhhhhhcCcEEEEEecCCCcccceee--ecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccC--ce
Confidence 999999999999999999997 9999877 567899999999999999999999999999999999999999999 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccc---cccchhhccccccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLS---QSMDWHSQFNRWWRGE 377 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l---~~~~y~~~~d~Ws~G~ 377 (1566)
|++|||.+...... -. ....++||++|||||+. ....|...||+|..|.
T Consensus 152 klaDfgvsaqitat-----i~------KrksfiGtpywmapEvaaverkggynqlcdiwa~gi 203 (829)
T KOG0576|consen 152 KLADFGVSAQITAT-----IA------KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGI 203 (829)
T ss_pred eecccCchhhhhhh-----hh------hhhcccCCccccchhHHHHHhccccccccccccccc
Confidence 99999998764421 00 12356799999999976 4667899999999993
No 351
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.84 E-value=1.2e-22 Score=236.48 Aligned_cols=191 Identities=16% Similarity=0.101 Sum_probs=154.9
Q ss_pred eeecchhhHHHHHhhhccCCcchhhccccceeeeccccccc-ccchhhhcCCCCCCCCCCCCcccCCCcccccccccccC
Q 000399 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQE-SKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1566)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~-~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~ 248 (1566)
||+|+||+||+|.++ .++..+|+|.+.+....... ...++ +|+.+|+.++||||+++++++...+
T Consensus 1 lg~g~~g~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~~~~~~ 66 (277)
T cd05577 1 LGKGGFGEVCACQVK------ATGKMYACKKLDKKRLKKRKGEQMAL--------NEKKILEKVSSRFIVSLAYAFETKD 66 (277)
T ss_pred CCCCCceeEEEEEEc------CCCcEEEEEEEehhhhhhhhhhHHHH--------HHHHHHHhCCCCCEeeeeeEEecCC
Confidence 699999999988753 46889999998764332222 12222 5899999999999999999999999
Q ss_pred ceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCc
Q 000399 249 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1566)
Q Consensus 249 ~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~ 327 (1566)
..|+||||+++ +|.+++.......+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+|||+++.
T Consensus 67 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~--~~~l~dfg~~~~ 144 (277)
T cd05577 67 DLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHG--NVRISDLGLAVE 144 (277)
T ss_pred eEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEccCcchhh
Confidence 99999999996 999998754434688999999999999999999999999999999999999988 799999999875
Q ss_pred cccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 328 NSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
..... ......++..|++||.+.+..++...|+|+.|++ .+..+.|+.+
T Consensus 145 ~~~~~------------~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i-------l~~l~~g~~p 193 (277)
T cd05577 145 LKGGK------------KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCT-------LYEMIAGRSP 193 (277)
T ss_pred hccCC------------ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHH-------HHHHhhCCCC
Confidence 43200 0112346778999999988788889999999987 5666677754
No 352
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.84 E-value=7.5e-23 Score=237.25 Aligned_cols=209 Identities=19% Similarity=0.173 Sum_probs=163.3
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~l~ 241 (1566)
+|.+.+.||+|+||.||+|.+. .++..+|+|++.+.........+.+. +|+.++++++ ||||++++
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~-------~e~~~~~~l~~~~~i~~~~ 68 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEK------ETNKEYAIKILDKRQLIKEKKVKYVK-------IEKEVLTRLNGHPGIIKLY 68 (280)
T ss_pred CceEeeeecCCCceEEEEEEEc------CCCCEEEEEEechHhccchHHHHHHH-------HHHHHHHhcccCCCchhHH
Confidence 6899999999999999998853 47889999998764332222122222 5888999998 99999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++...+..++||||+++ +|.+++.. ...++...++.++.|++.||.|||+.|++|+||||+||+++.++ .++|+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~--~~~l~ 144 (280)
T cd05581 69 YTFQDEENLYFVLEYAPNGELLQYIRK--YGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDM--HIKIT 144 (280)
T ss_pred HHhcCCceEEEEEcCCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCC--CEEec
Confidence 999999999999999965 99999974 34688999999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCC---------CCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc
Q 000399 321 DKPLVGFNSIADWCTIP---------TSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~---------~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a 391 (1566)
|||++............ ...........+.++..|++||++....++...|+|+.|++ .+..++
T Consensus 145 df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~-------l~~l~~ 217 (280)
T cd05581 145 DFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCI-------IYQMLT 217 (280)
T ss_pred CCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHH-------HHHHHh
Confidence 99999865431110000 00000011233457888999999988888889999999977 666677
Q ss_pred cccc
Q 000399 392 GRRW 395 (1566)
Q Consensus 392 grs~ 395 (1566)
|+.+
T Consensus 218 g~~p 221 (280)
T cd05581 218 GKPP 221 (280)
T ss_pred CCCC
Confidence 7764
No 353
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.84 E-value=2.9e-22 Score=235.75 Aligned_cols=197 Identities=17% Similarity=0.152 Sum_probs=151.5
Q ss_pred cccccceeeeecchhhHHHHHhhhcc----------CCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLS----------GCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGC 231 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~----------~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~ 231 (1566)
++|++.+.||+|+||.||++.+.-.. ....++..+|+|.+.... ......++. +|+.+|+.
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~--------~E~~~l~~ 75 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA-NKNARNDFL--------KEIKIMSR 75 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC-CHHHHHHHH--------HHHHHHHh
Confidence 47999999999999999988642100 112345678999886532 222223344 59999999
Q ss_pred ccCCCcccccccccccCceeeeccCCcc-chhhhhccCcc---------cccchhHHHHHHHHHHHHHHHHhhccccCCC
Q 000399 232 LRHPNVAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPN---------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRS 301 (1566)
Q Consensus 232 l~HpNIV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~---------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrD 301 (1566)
++||||+++++++...+..++||||+++ +|.+++..... ..++...+..++.|++.||.|||++||+|||
T Consensus 76 l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~d 155 (296)
T cd05095 76 LKDPNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRD 155 (296)
T ss_pred CCCCCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeeccc
Confidence 9999999999999999999999999986 99999874221 1255667899999999999999999999999
Q ss_pred ccCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 302 VCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 302 LKp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||+|||++.++ .+||+|||+++....... . .......++..|++||...+..++...|+|+.|++
T Consensus 156 lkp~Nili~~~~--~~~l~dfg~~~~~~~~~~------~---~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~ 221 (296)
T cd05095 156 LATRNCLVGKNY--TIKIADFGMSRNLYSGDY------Y---RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVT 221 (296)
T ss_pred CChheEEEcCCC--CEEeccCcccccccCCcc------e---eccCcCcCccccCCHHHHhcCCccchhhhhHHHHH
Confidence 999999999888 799999999985432100 0 00112234567999998887788999999999987
No 354
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.84 E-value=1.7e-22 Score=234.11 Aligned_cols=203 Identities=20% Similarity=0.193 Sum_probs=159.1
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccc----cchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES----KNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~----~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
+|.+.+.||+|+||.||+|.+. .++..+|+|.+.......... ....+ ...+|+.+++.++||||+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~------~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~----~~~~e~~~l~~l~h~~i~ 71 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNV------TTGEMMAVKQVELPATIAGRHDSRQKDMVK----ALRSEIETLKDLDHLNIV 71 (272)
T ss_pred ceeecceecccCceEEEEEeec------CCCceeeeeeeechhhhhcccchHHHHHHH----HHHHHHHHHHhcCCCCcc
Confidence 5888999999999999998753 468899999886432221110 10111 112589999999999999
Q ss_pred cccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++++++...+..++||||+++ +|.++++.. +.+++..++.++.||+.||.|||+++++||||||+||+++.++ .+
T Consensus 72 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~--~~ 147 (272)
T cd06629 72 QYLGFETTEEYLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADG--IC 147 (272)
T ss_pred eEEEEeccCCceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCC--eE
Confidence 999999999999999999987 999999743 5678888999999999999999999999999999999999988 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc--hhhccccccccccCCchhhhHHHhhccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD--WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~--y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+|||+++........ .......++..|+|||.+.... ++.+.|+|+.|++ .+..++|+.+
T Consensus 148 ~l~d~~~~~~~~~~~~~---------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~-------l~~l~~g~~p 211 (272)
T cd06629 148 KISDFGISKKSDDIYDN---------DQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCV-------VLEMFAGRRP 211 (272)
T ss_pred EEeeccccccccccccc---------cccccccCCccccCHHHhccccCCCCccchhHHHHHH-------HHHHHhCCCC
Confidence 99999999854321000 0112234778899999987654 7889999999987 6677777664
No 355
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.84 E-value=2.8e-22 Score=230.67 Aligned_cols=201 Identities=20% Similarity=0.210 Sum_probs=161.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|.+.+.||+|+||.||+|.+. .++..+|+|.+............+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~~~~l~~~~i~~~~~ 66 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNL------DTGELMAVKEIRIQDNDPKTIKEIA--------DEMKVLELLKHPNLVKYYG 66 (264)
T ss_pred CceeeeEeecCCCcEEEEEEEC------CCCcEEEEEEEECcccchHHHHHHH--------HHHHHHHhCCCCChhheee
Confidence 5889999999999999988752 4678899999876543322333333 6999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+...+.+++|+||+++ +|.+++.. ...+++..++.++.|++.||.|||++||+||||||+||++++++ .+||+|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~--~~kl~d 142 (264)
T cd06626 67 VEVHREKVYIFMEYCSGGTLEELLEH--GRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNG--VIKLGD 142 (264)
T ss_pred eEecCCEEEEEEecCCCCcHHHHHhh--cCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEEEcc
Confidence 99999999999999996 99999973 34467888899999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc---hhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD---WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~---y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||++.......... .. ......++..|++||++.+.. ++...|+|+.|++ .+..+.|+.+
T Consensus 143 ~g~~~~~~~~~~~~---~~----~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~i-------l~~l~~g~~p 205 (264)
T cd06626 143 FGCAVKLKNNTTTM---GE----EVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCV-------VLEMATGKRP 205 (264)
T ss_pred cccccccCCCCCcc---cc----cccCCcCCcCccChhhccCCCCCCCCcccchHHHHHH-------HHHHHhCCCC
Confidence 99988654211100 00 011234778899999987765 7889999999987 6677777654
No 356
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.84 E-value=5.5e-23 Score=223.24 Aligned_cols=196 Identities=18% Similarity=0.225 Sum_probs=152.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCC-CCcccCCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSV-PGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~i-L~~l~HpNIV~l 240 (1566)
++.+-+..||.|+||+|++-.++ +.|+..|||.+..... ..+.++++ .|.+. ++.-+.||||++
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk------~sg~~mAVKrIr~~n~-~keq~rll--------~e~d~~mks~~cp~IVkf 128 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHK------PSGKLMAVKRIRSNNI-EKEQKRLL--------MEHDTVMKSSNCPNIVKF 128 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcC------ccCcEEEEEEeeeccc-hHHHHHHH--------HHHHHHHhhcCCcHHHHH
Confidence 46677889999999999999875 7899999999987644 23344455 46665 444478999999
Q ss_pred cccccccCceeeeccCCccchhhhhcc---CcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhh
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQF---SPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~~---~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
||+...++..||.||+|+-+|..+.++ .....++|..+..|....+.||.||-. ..|||||+||+|||++..| .
T Consensus 129 yGa~F~EGdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G--~ 206 (361)
T KOG1006|consen 129 YGALFSEGDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHG--D 206 (361)
T ss_pred hhhhhcCCceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCC--C
Confidence 999999999999999999877666543 334557888888888889999999987 6899999999999999999 6
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc--ccchhhccccccccccCCchhhhHHHhhccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ--SMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~--~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
+||||||++.+.... ...+.. . |-..|||||.+. ...|+-..|+|+.|.- +++...|+
T Consensus 207 vKLCDFGIcGqLv~S----iAkT~d-----a---GCrpYmAPERi~p~~~gyDiRSDvWSLGIT-------L~EvAtG~ 266 (361)
T KOG1006|consen 207 VKLCDFGICGQLVDS----IAKTVD-----A---GCRPYMAPERIDPSDKGYDIRSDVWSLGIT-------LYEVATGN 266 (361)
T ss_pred EeeecccchHhHHHH----HHhhhc-----c---CCccccChhccCCccCCcchhhhhhhhcce-------EeeeecCC
Confidence 999999999865531 111111 2 334699999885 3458889999999954 45555554
No 357
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.84 E-value=2.7e-21 Score=232.05 Aligned_cols=270 Identities=17% Similarity=0.255 Sum_probs=202.2
Q ss_pred ccccccccccchHHHHHHhhccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeee
Q 000399 1258 PQRRVYDYHKSSVERQEATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVA 1334 (1566)
Q Consensus 1258 ~~~~~~~le~~~~~~~~~~~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~sla 1334 (1566)
.|--+|+.+.+.-.. ....|.+.+.+ .||||++ +|||+.||.|+|||...+ |..+|..|+..|+.+.
T Consensus 330 gQLlVweWqsEsYVl-----KQQgH~~~i~~l~YSpDgq~-----iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~ 399 (893)
T KOG0291|consen 330 GQLLVWEWQSESYVL-----KQQGHSDRITSLAYSPDGQL-----IATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQ 399 (893)
T ss_pred ceEEEEEeeccceee-----eccccccceeeEEECCCCcE-----EEeccCCCcEEEEeccCceEEEEeccCCCceEEEE
Confidence 455555554332222 23458888887 7999999 999999999999999988 9999999999999999
Q ss_pred ecCcceEEEeeccCCCcccceeeEEecccccccccccc-cccccceEEeecCCceeec--c-CcEEEeecCCCcEEEEee
Q 000399 1335 VGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGH-EEVVNDICVLSSSGRIASC--D-GTLHVWNSQTGKLLSVFA 1410 (1566)
Q Consensus 1335 fspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH-~~~V~sVafsp~g~~LaSg--D-gtIkLWDl~tg~~l~~l~ 1410 (1566)
|+.+++.++|+|. |||||.||+...++-++|... .-.-.||+..|+|..+..| | -.|.+|+++||+.+-.+.
T Consensus 400 f~~~g~~llssSL----DGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLs 475 (893)
T KOG0291|consen 400 FTARGNVLLSSSL----DGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILS 475 (893)
T ss_pred EEecCCEEEEeec----CCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhc
Confidence 9999999999999 999999999999999998764 3456778878888887655 4 469999999999999999
Q ss_pred ccccccccc-----------CCCCCccccccc-CCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEE
Q 000399 1411 EQSMDSLHG-----------GSPSSSISKINT-DQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLR 1478 (1566)
Q Consensus 1411 ~h~~~~~~~-----------~~~~~~~~~~~~-~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIr 1478 (1566)
+|.+.+... ++++..+.+|+. +....+....+.+.|+.++|+|+ |+.+++++.||.|.
T Consensus 476 GHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~sdvl~vsfrPd----------G~elaVaTldgqIt 545 (893)
T KOG0291|consen 476 GHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIRSDVLAVSFRPD----------GKELAVATLDGQIT 545 (893)
T ss_pred CCCCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeeccceeEEEEcCC----------CCeEEEEEecceEE
Confidence 988765432 333333444432 11222222334555667777765 99999999999999
Q ss_pred EEEccCCceeeeeccCCcccC---chhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEee
Q 000399 1479 FIDINQGQKLHLWRGEPTELG---FPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR 1551 (1566)
Q Consensus 1479 lWDi~tg~~l~~~~~h~~~v~---~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~ 1551 (1566)
+||+..+..+.++.+-....+ ....+++-.......|..+.+|+||..|++|+.++.|++||++++-+++.|+
T Consensus 546 f~d~~~~~q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~~~vllkkfq 621 (893)
T KOG0291|consen 546 FFDIKEAVQVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVPEGVLLKKFQ 621 (893)
T ss_pred EEEhhhceeeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECchhheeeeEE
Confidence 999999887766665432110 1222222222233456677888999999999999999999999999988875
No 358
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.84 E-value=1.7e-22 Score=236.00 Aligned_cols=190 Identities=15% Similarity=0.143 Sum_probs=148.6
Q ss_pred eeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCC---CCCCcccCCCccccccccc
Q 000399 169 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDES---SVPGCLRHPNVAPVLGLLK 245 (1566)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi---~iL~~l~HpNIV~l~~~~~ 245 (1566)
.||+|+||.||++.+. .++..+|+|.+.+............. +|. .++...+||||+.+++.+.
T Consensus 1 ~lg~G~~g~Vy~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~ 67 (279)
T cd05633 1 IIGRGGFGEVYGCRKA------DTGKMYAMKCLDKKRIKMKQGETLAL-------NERIMLSLVSTGDCPFIVCMTYAFH 67 (279)
T ss_pred CcccCCCeEEEEEEEC------CCCcEEEEEEEEccccccchHHHHHH-------HHHHHHHHHhhCCCCcEeEEEEEEe
Confidence 4899999999988752 46889999998765433222111111 233 2344457999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
..+..++||||+++ +|.+++.. .+.+++..++.++.|++.||.|||+++|+||||||+|||++.++ .+||+|||+
T Consensus 68 ~~~~~~lv~e~~~~~~L~~~i~~--~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~--~~~l~dfg~ 143 (279)
T cd05633 68 TPDKLCFILDLMNGGDLHYHLSQ--HGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRISDLGL 143 (279)
T ss_pred cCCeEEEEEecCCCCCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCC--CEEEccCCc
Confidence 99999999999997 99988873 44588999999999999999999999999999999999999988 799999999
Q ss_pred CCccccccccCCCCCCceeeeecCCccccccccccccc-ccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
++..... . .....|+..|+|||.+. +..++...|+|+.|++ .+..+.|+.+
T Consensus 144 ~~~~~~~-------~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~-------l~~l~~g~~p 195 (279)
T cd05633 144 ACDFSKK-------K------PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCM-------LFKLLRGHSP 195 (279)
T ss_pred ceecccc-------C------ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHH-------HHHHHhCCCC
Confidence 8743311 0 01124788999999886 4567889999999987 6667777754
No 359
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.84 E-value=2.1e-22 Score=237.75 Aligned_cols=191 Identities=15% Similarity=0.181 Sum_probs=155.0
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
..++.++||+|-||.||+|.... ........||||.-+.+ ......+.|++ |+.+|++++|||||+|+|
T Consensus 390 ~Itl~r~iG~GqFGdVy~gvYt~--~~kge~iaVAvKtCK~d-~t~d~tekflq--------Ea~iMrnfdHphIikLIG 458 (974)
T KOG4257|consen 390 LITLKRLIGEGQFGDVYKGVYTD--PEKGERIAVAVKTCKTD-CTPDDTEKFLQ--------EASIMRNFDHPHIIKLIG 458 (974)
T ss_pred hccHHHhhcCCcccceeeeEecc--cccCcceeeeeehhccC-CChhhHHHHHH--------HHHHHHhCCCcchhheee
Confidence 34567889999999999987432 21234556899987764 44455777885 999999999999999999
Q ss_pred cccccCceeeeccCCc-cchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~-gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+ ...|||||+++ |.|..+|+.++ ..++......|++||+.||.|||+++.|||||...|||+.... -+||+|
T Consensus 459 v~~e-~P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~--CVKLaD 534 (974)
T KOG4257|consen 459 VCVE-QPMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQ--CVKLAD 534 (974)
T ss_pred eeec-cceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcc--eeeecc
Confidence 9965 56899999999 59999998543 3468888889999999999999999999999999999999888 499999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
||++|.......+..+ ..+ -..-|||||-++-..++.+.|+|..|+-
T Consensus 535 FGLSR~~ed~~yYkaS-~~k---------LPIKWmaPESINfRrFTtASDVWMFgVC 581 (974)
T KOG4257|consen 535 FGLSRYLEDDAYYKAS-RGK---------LPIKWMAPESINFRRFTTASDVWMFGVC 581 (974)
T ss_pred cchhhhccccchhhcc-ccc---------cceeecCccccchhcccchhhHHHHHHH
Confidence 9999987754433221 111 2335999999999999999999999964
No 360
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.84 E-value=2e-22 Score=238.44 Aligned_cols=196 Identities=16% Similarity=0.138 Sum_probs=159.1
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
...|++.+.||+|+||.||+|.+. .++..||+|.+........ ...++. +|+.+++.++||||++
T Consensus 14 ~~~y~~~~~lg~g~~g~vy~~~~~------~~~~~v~iK~~~~~~~~~~~~~~~~~--------~Ei~~l~~l~h~niv~ 79 (307)
T cd06607 14 EKLFTDLREIGHGSFGAVYFARDV------RTNEVVAIKKMSYSGKQSNEKWQDII--------KEVRFLQQLRHPNTIE 79 (307)
T ss_pred chhhhhheeecCCCCeEEEEEEEc------CCCcEEEEEEEeccccCcHHHHHHHH--------HHHHHHHhCCCCCEEE
Confidence 346999999999999999988753 4678999999865432222 222333 5999999999999999
Q ss_pred ccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
+++++.+.+..|+||||++++|.+++... ...+++..+..++.|++.||.|||++||+||||+|+||+++.++ .+||
T Consensus 80 ~~~~~~~~~~~~lv~e~~~g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~--~~kL 156 (307)
T cd06607 80 YKGCYLREHTAWLVMEYCLGSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPG--TVKL 156 (307)
T ss_pred EEEEEEeCCeEEEEHHhhCCCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCC--CEEE
Confidence 99999999999999999999888877632 33578888999999999999999999999999999999999998 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc---ccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++..... ....+++.|+|||++. ...++...|+|+.|++ .+..+.|+.+
T Consensus 157 ~dfg~~~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~i-------l~el~tg~~p 213 (307)
T cd06607 157 ADFGSASLVSPA---------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT-------CIELAERKPP 213 (307)
T ss_pred eecCcceecCCC---------------CCccCCccccCceeeeccCCCCCCcccchHHHHHH-------HHHHHcCCCC
Confidence 999998753310 1234778899999874 3557789999999987 6677778754
No 361
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.84 E-value=1.2e-22 Score=237.81 Aligned_cols=197 Identities=17% Similarity=0.164 Sum_probs=152.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.+.. .....++..+|+|.+.... ......++. +|+.+++.++||||+++
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~-~~~~~~~~~~aiK~~~~~~-~~~~~~~~~--------~ei~~l~~l~h~~iv~~ 73 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPG-LLPYEPFTMVAVKMLKEEA-SADMQADFQ--------REAALMAEFDHPNIVKL 73 (288)
T ss_pred hHhceecccccccccccEEEEEEcc-cCCCCcceeEEEEecCCCc-CHHHHHHHH--------HHHHHHHhcCCCchheE
Confidence 3579999999999999999987531 0012356789999986532 222223344 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCc--------------------ccccchhHHHHHHHHHHHHHHHHhhccccC
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP--------------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAH 299 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~--------------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiH 299 (1566)
++++...+..++||||+++ +|.+++.... ...+++..+..++.|++.||.|||+++++|
T Consensus 74 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H 153 (288)
T cd05050 74 LGVCAVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVH 153 (288)
T ss_pred EEEEcCCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeec
Confidence 9999999999999999996 9999986321 123567778899999999999999999999
Q ss_pred CCccCCCccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 300 RSVCPSNVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 300 rDLKp~NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||||+||+++.++ .+||+|||+++......... .......+..|+|||.+.+..++...|+|+.|++
T Consensus 154 ~dl~p~nil~~~~~--~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i 221 (288)
T cd05050 154 RDLATRNCLVGENM--VVKIADFGLSRNIYSADYYK---------ASENDAIPIRWMPPESIFYNRYTTESDVWAYGVV 221 (288)
T ss_pred ccccHhheEecCCC--ceEECccccceecccCcccc---------ccCCCccChhhcCHHHHhcCCCCchhHHHHHHHH
Confidence 99999999999988 79999999987543211000 0111124556999999988889999999999987
No 362
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.84 E-value=1.6e-22 Score=234.62 Aligned_cols=196 Identities=13% Similarity=0.159 Sum_probs=162.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||.|+||.||+|.+. .++..+|+|.+.... .......+. +|+.+++.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 65 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDK------RTNQVVAIKVIDLEE-AEDEIEDIQ--------QEIQFLSQCRSPYITKYY 65 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEEC------CCCeEEEEEEeeccc-cchHHHHHH--------HHHHHHHHcCCCCeeeee
Confidence 36899999999999999998863 468899999987542 122222333 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.++..+|+|+||+++ +|.+++... .+++..++.++.|++.||.|||+++|+||||||+||++++++ .++|+
T Consensus 66 ~~~~~~~~~~~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l~ 140 (274)
T cd06609 66 GSFLKGSKLWIIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEG--DVKLA 140 (274)
T ss_pred EEEEECCeEEEEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCC--CEEEc
Confidence 999999999999999987 999999742 678889999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... ......+++.|+|||.+.+..++..+|+|+.|++ .+..++|+.+
T Consensus 141 d~g~~~~~~~~~~-----------~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~i-------l~~l~tg~~p 197 (274)
T cd06609 141 DFGVSGQLTSTMS-----------KRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGIT-------AIELAKGEPP 197 (274)
T ss_pred ccccceeeccccc-----------ccccccCCccccChhhhccCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 9999986542110 0112347788999999988889999999999988 6777788765
No 363
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.84 E-value=3e-22 Score=233.45 Aligned_cols=197 Identities=19% Similarity=0.224 Sum_probs=158.5
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
|++.+.||+|++|.||+|.++ .++..+|+|++............+. +|+.+++.++||||++++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~E~~~l~~l~~~~iv~~~~~ 66 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDK------LTGEIVALKKIRLETEDEGVPSTAI--------REISLLKELNHPNIVRLLDV 66 (283)
T ss_pred CchheEecCCCCeEEEEEEEc------CCCCEEEEEEeecccccccchhHHH--------HHHHHHHhcCCCCccCHhhe
Confidence 678899999999999998863 4788999999876432222222333 59999999999999999999
Q ss_pred ccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcC
Q 000399 244 LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFG 323 (1566)
+.+.+..|+||||++++|.+++...+...+++..++.++.|++.||.|||+++++||||+|+||+++.++ .++|+|||
T Consensus 67 ~~~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~--~~~l~df~ 144 (283)
T cd07835 67 VHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREG--ALKLADFG 144 (283)
T ss_pred eccCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCC--cEEEeecc
Confidence 9999999999999988999998754444578899999999999999999999999999999999999988 79999999
Q ss_pred CCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhcccc
Q 000399 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+++....... . .....++..|+|||++.+. .++...|+|+.|++ .+..++|+.
T Consensus 145 ~~~~~~~~~~-----~------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~-------l~~l~~g~~ 198 (283)
T cd07835 145 LARAFGVPVR-----T------YTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCI-------FAEMVNRRP 198 (283)
T ss_pred cccccCCCcc-----c------cCccccccCCCCCceeecCcccCcHHHHHHHHHH-------HHHHHhCCC
Confidence 9975431100 0 0111357789999987653 56788999999987 666777754
No 364
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.84 E-value=3.1e-23 Score=239.46 Aligned_cols=198 Identities=21% Similarity=0.198 Sum_probs=154.6
Q ss_pred ccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccc
Q 000399 165 FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLL 244 (1566)
Q Consensus 165 ~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~ 244 (1566)
.+.+.||.|+||.||+|...- .....+..|+||.+... .......+++ +|+++|++++||||++++|++
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~--~~~~~~~~V~vk~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~ni~~~~g~~ 70 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQ--KDNDKNQPVAVKILKPS-SSEEEEEEFL--------NEIQILRKLRHPNIVKLYGFC 70 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEES--TTTSSEEEEEEEEESTT-SSHHHHHHHH--------HHHHHHHTHSBTTBE-EEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEc--ccCCCCEEEEEEEeccc-cccccceeee--------ecccccccccccccccccccc
Confidence 356899999999999887531 22345788999998542 2233345566 499999999999999999999
Q ss_pred cccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcC
Q 000399 245 KTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1566)
Q Consensus 245 ~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFG 323 (1566)
...+.+++||||+++ +|.++|.......++......++.||+.||.|||+++|+|+||+++||+++.++ .+||+|||
T Consensus 71 ~~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~--~~Kl~~f~ 148 (259)
T PF07714_consen 71 IENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNG--QVKLSDFG 148 (259)
T ss_dssp ESSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTT--EEEEESTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccc
Confidence 988889999999985 999999865345678888999999999999999999999999999999999998 79999999
Q ss_pred CCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc
Q 000399 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1566)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a 391 (1566)
+++........ ...........|+|||.+....++...|+|+.|.+ .+..+.
T Consensus 149 ~~~~~~~~~~~---------~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~-------l~ei~~ 200 (259)
T PF07714_consen 149 LSRPISEKSKY---------KNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGML-------LYEILT 200 (259)
T ss_dssp TGEETTTSSSE---------EESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHH-------HHHHHT
T ss_pred ccccccccccc---------ccccccccccccccccccccccccccccccccccc-------cccccc
Confidence 99865211000 11222336677999999998889999999999977 667766
No 365
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.84 E-value=4.4e-22 Score=240.39 Aligned_cols=189 Identities=19% Similarity=0.208 Sum_probs=156.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.+.|++...+|.|+|+.|-.+.+. .+.+..++|++.+.....+ +|+.++... +||||++
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~------~t~~~~~vkii~~~~~~~~--------------~e~~~~~~~~~h~niv~ 380 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESS------PTDQEPAVKIISKRADDNQ--------------DEIPISLLVRDHPNIVK 380 (612)
T ss_pred chhhccccccCCCCccceeeeecc------ccccchhheeccccccccc--------------cccchhhhhcCCCccee
Confidence 557999999999999999988873 6788899999987633333 588777666 6999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccc-cccchhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL-TDSCWSWL 317 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl-~~~~~~~v 317 (1566)
+++.+.+..+.|+|||.+.| .|.+.+...+ .+. ..+..|++||+.|+.|||++|||||||||+|||+ ++.+ ++
T Consensus 381 ~~~v~~~~~~~~~v~e~l~g~ell~ri~~~~--~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g--~l 455 (612)
T KOG0603|consen 381 SHDVYEDGKEIYLVMELLDGGELLRRIRSKP--EFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAG--HL 455 (612)
T ss_pred ecceecCCceeeeeehhccccHHHHHHHhcc--hhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCC--cE
Confidence 99999999999999999997 5555555222 223 6778899999999999999999999999999999 4666 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|+|||.++..... +.+. +-|..|.|||++....|+..||+|+.|.+ .+.+++|+++
T Consensus 456 rltyFG~a~~~~~~-------------~~tp-~~t~~y~APEvl~~~~yt~acD~WSLGvl-------Ly~ML~G~tp 512 (612)
T KOG0603|consen 456 RLTYFGFWSELERS-------------CDTP-ALTLQYVAPEVLAIQEYTEACDWWSLGVL-------LYEMLTGRTL 512 (612)
T ss_pred EEEEechhhhCchh-------------hccc-chhhcccChhhhccCCCCcchhhHHHHHH-------HHHHHhCCCc
Confidence 99999999976631 1111 14677999999999999999999999988 8899999986
No 366
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.84 E-value=2.5e-22 Score=231.26 Aligned_cols=203 Identities=16% Similarity=0.118 Sum_probs=162.8
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||.|+||+||+|... .++..+|+|++....... ....+. +|+.+|+.++||||++++
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~-~~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICL------PNNEKVAIKRIDLEKCQT-SVDELR--------KEVQAMSQCNHPNVVKYY 65 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEc------CCCcEEEEEEeccCCcch-HHHHHH--------HHHHHHHhcCCCCEEEEE
Confidence 36999999999999999988752 467889999987543322 233333 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcc-cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPN-ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~-~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
+.+...+..|+|||++++ +|.++++.... ..+++..++.++.|++.||.|||++||+||||||+||++++++ .+||
T Consensus 66 ~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~--~~~l 143 (267)
T cd06610 66 TSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDG--SVKI 143 (267)
T ss_pred EEEeeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC--CEEE
Confidence 999999999999999987 99999974322 4578888999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||++........... .....+.|+..|++||++... .++..+|.|+.|++ .+..++|+.+
T Consensus 144 ~df~~~~~~~~~~~~~~-------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i-------~~~l~~g~~p 206 (267)
T cd06610 144 ADFGVSASLADGGDRTR-------KVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGIT-------AIELATGAAP 206 (267)
T ss_pred cccchHHHhccCccccc-------cccccccCChhhcChHHHccccCcCcccchHhHhHH-------HHHHHhCCCC
Confidence 99999875442111100 011233578899999998766 67889999999988 7777788754
No 367
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.84 E-value=1.9e-22 Score=233.65 Aligned_cols=202 Identities=16% Similarity=0.175 Sum_probs=152.3
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
|++.+.||+|+||.||+|... ....++..+|||++...........++. +|+.+|+.++||||++++++
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~---~~~~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~i~~~~~~ 69 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLK---SEDGSFQKVAVKMLKADIFSSSDIEEFL--------REAACMKEFDHPNVIKLIGV 69 (273)
T ss_pred CcchhcccCCCCCCEEeeEee---ccCCCceEEEEEEeccccCChHHHHHHH--------HHHHHHhcCCCCCcceEEEE
Confidence 677889999999999998752 1224578899999876543333334444 59999999999999999998
Q ss_pred ccccC------ceeeeccCCcc-chhhhhccCc----ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 244 LKTSG------LITSVIPKTPY-TLENILQFSP----NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 244 ~~~~~------~l~LV~E~~~g-sL~~~l~~~~----~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
+.... ..++++||+.+ +|.+++.... ...++...++.++.|++.||.|||++||+||||||+||+++.+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~ 149 (273)
T cd05074 70 SLRSRAKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNEN 149 (273)
T ss_pred EccCCCCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCC
Confidence 86532 24788899985 8888764211 1236777889999999999999999999999999999999988
Q ss_pred chhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-
Q 000399 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA- 391 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a- 391 (1566)
+ .+||+|||+++.......... .....+++.|++||.+....++...|+|+.|++ .+..++
T Consensus 150 ~--~~kl~dfg~~~~~~~~~~~~~---------~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~i-------l~el~~~ 211 (273)
T cd05074 150 M--TVCVADFGLSKKIYSGDYYRQ---------GCASKLPVKWLALESLADNVYTTHSDVWAFGVT-------MWEIMTR 211 (273)
T ss_pred C--CEEECcccccccccCCcceec---------CCCccCchhhcCHhHHhcCccchhhhhHHHHHH-------HHHHhhC
Confidence 8 799999999985432110000 001124567999999988888899999999987 555555
Q ss_pred ccc
Q 000399 392 GRR 394 (1566)
Q Consensus 392 grs 394 (1566)
|+.
T Consensus 212 g~~ 214 (273)
T cd05074 212 GQT 214 (273)
T ss_pred CCC
Confidence 444
No 368
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.84 E-value=2.3e-22 Score=242.37 Aligned_cols=197 Identities=22% Similarity=0.307 Sum_probs=157.3
Q ss_pred hhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCc
Q 000399 158 SRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNV 237 (1566)
Q Consensus 158 ~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNI 237 (1566)
+...++|++.+.||+|+||.||+|.+. .++..||+|++.+..........+. +|+.++++++||||
T Consensus 13 ~~~~~~y~~~~~lg~G~~g~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~Ei~~l~~l~h~~i 78 (345)
T cd07877 13 WEVPERYQNLSPVGSGAYGSVCAAFDT------KTGLRVAVKKLSRPFQSIIHAKRTY--------RELRLLKHMKHENV 78 (345)
T ss_pred hhccCceEEEEEeeecCCeEEEEEEEc------CCCeEEEEEEecCcchhhHHHHHHH--------HHHHHHHHcCCCcc
Confidence 344578999999999999999988753 4688999999875432222222333 59999999999999
Q ss_pred cccccccccc------CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc
Q 000399 238 APVLGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1566)
Q Consensus 238 V~l~~~~~~~------~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~ 311 (1566)
+++++++... ...|+++++++++|.++++. ..+++..++.++.|++.||.|||++||+||||||+||+++.
T Consensus 79 v~~~~~~~~~~~~~~~~~~~lv~~~~~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~ 155 (345)
T cd07877 79 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNE 155 (345)
T ss_pred cceeeeeeecccccccccEEEEehhcccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcC
Confidence 9999988543 35789999998899888863 34788889999999999999999999999999999999999
Q ss_pred cchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhh
Q 000399 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKL 390 (1566)
Q Consensus 312 ~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~ 390 (1566)
++ .+||+|||+++..... .....++..|+|||++.+ ..++...|+|+.|++ .+..+
T Consensus 156 ~~--~~kl~dfg~~~~~~~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~i-------l~el~ 212 (345)
T cd07877 156 DC--ELKILDFGLARHTDDE--------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI-------MAELL 212 (345)
T ss_pred CC--CEEEeccccccccccc--------------ccccccCCCccCHHHHhCccCCCchhhHHHHHHH-------HHHHH
Confidence 98 7999999998753310 112247888999998765 467788999999987 66667
Q ss_pred cccc
Q 000399 391 AGRR 394 (1566)
Q Consensus 391 agrs 394 (1566)
+|+.
T Consensus 213 ~g~~ 216 (345)
T cd07877 213 TGRT 216 (345)
T ss_pred hCCC
Confidence 7764
No 369
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.84 E-value=3.7e-22 Score=234.85 Aligned_cols=202 Identities=17% Similarity=0.164 Sum_probs=158.5
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
..++|++.+.||+|+||.||+|.++ .++..+|+|.+............+. +|+.+++.++||||++
T Consensus 5 ~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~iK~~~~~~~~~~~~~~~~--------~e~~~~~~l~h~~i~~ 70 (302)
T cd07864 5 CVDKFDIIGQIGEGTYGQVYKARDK------DTGELVALKKVRLDNEKEGFPITAI--------REIKILRQLNHRNIVN 70 (302)
T ss_pred hhhhhheeeeecccCCEEEEEEEEC------CCCcEEEEEEEeecccccCchHHHH--------HHHHHHHhCCCCCeee
Confidence 3568999999999999999998863 4678899999875432222112222 5899999999999999
Q ss_pred ccccccccC----------ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccc
Q 000399 240 VLGLLKTSG----------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1566)
Q Consensus 240 l~~~~~~~~----------~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl 309 (1566)
+++++.+.. .+|+||||++++|.+.+... ...+++..++.++.||+.||.|||+.||+||||||+||++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili 149 (302)
T cd07864 71 LKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL 149 (302)
T ss_pred eeheecCcchhhhccccCCcEEEEEcccCccHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE
Confidence 999987654 79999999999888877643 3357888999999999999999999999999999999999
Q ss_pred cccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHH
Q 000399 310 TDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLN 388 (1566)
Q Consensus 310 ~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln 388 (1566)
++++ .+||+|||+++........ +. ....++..|+|||.+.+ ..++...|+|+.|++ .+.
T Consensus 150 ~~~~--~~kl~dfg~~~~~~~~~~~-----~~-----~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~-------~~e 210 (302)
T cd07864 150 NNKG--QIKLADFGLARLYNSEESR-----PY-----TNKVITLWYRPPELLLGEERYGPAIDVWSCGCI-------LGE 210 (302)
T ss_pred CCCC--cEEeCcccccccccCCccc-----cc-----ccceeccCccChHHhcCCCCCCchhHHHHHHHH-------HHH
Confidence 9998 7999999999865421110 00 01125677999998754 346778999999987 667
Q ss_pred hhccccc
Q 000399 389 KLAGRRW 395 (1566)
Q Consensus 389 ~~agrs~ 395 (1566)
.+.|+.+
T Consensus 211 l~~g~~~ 217 (302)
T cd07864 211 LFTKKPI 217 (302)
T ss_pred HHhCCCC
Confidence 7778754
No 370
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.84 E-value=4.6e-22 Score=229.09 Aligned_cols=192 Identities=16% Similarity=0.140 Sum_probs=146.7
Q ss_pred eeeeecchhhHHHHHhhhccCC-cchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGC-LEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKT 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~-~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~ 246 (1566)
+.||+|+||.||+|.++..... ......+|+|.+.... .....++. +|+.+|+.++||||+++++++..
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~--------~e~~~l~~~~h~~iv~~~~~~~~ 70 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFF--------EAASMMSQLSHKHLVLNYGVCVC 70 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHH--------HHHHHHHhCCCCChhheeeEEEe
Confidence 4699999999999886321000 1234568888876432 12222333 48889999999999999999999
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh------hhhh
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS------WLYI 319 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~------~vKL 319 (1566)
++..++||||+++ +|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++.. .+|+
T Consensus 71 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l 149 (258)
T cd05078 71 GDESIMVQEYVKFGSLDTYLKKN-KNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKL 149 (258)
T ss_pred CCCcEEEEecCCCCcHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEe
Confidence 9999999999986 999999743 2346778888999999999999999999999999999999887621 2689
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~ag 392 (1566)
+|||++...... ....++..|+|||++.+ ..++...|+|+.|++ .+..+.|
T Consensus 150 ~d~g~~~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~-------l~~l~~g 201 (258)
T cd05078 150 SDPGISITVLPK---------------EILLERIPWVPPECIENPQNLSLAADKWSFGTT-------LWEIFSG 201 (258)
T ss_pred cccccccccCCc---------------hhccccCCccCchhccCCCCCCchhhHHHHHHH-------HHHHHcC
Confidence 999988643310 11236778999999876 457888999999987 5666666
No 371
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.84 E-value=2.6e-22 Score=233.86 Aligned_cols=197 Identities=17% Similarity=0.199 Sum_probs=158.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|++|.||+|++. .++..+|+|.+...... .....+. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~-~~~~~~~--------~E~~~l~~l~h~~i~~~~~ 65 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNR------TTGEIVALKEIHLDAEE-GTPSTAI--------REISLMKELKHENIVRLHD 65 (284)
T ss_pred CceEeeeeccCCceEEEEEEEC------CCCeEEEEEEecccccc-cchHHHH--------HHHHHHHhhcCCCEeeeee
Confidence 5889999999999999998863 46889999998764321 1122223 5999999999999999999
Q ss_pred cccccCceeeeccCCccchhhhhccCc-ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPYTLENILQFSP-NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~gsL~~~l~~~~-~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+.+..++||||++++|.+++.... ...+++..++.++.|++.||.|||++|++||||||+||++++++ .+||+|
T Consensus 66 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~--~~~l~d 143 (284)
T cd07836 66 VIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRG--ELKLAD 143 (284)
T ss_pred eEeeCCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCC--cEEEee
Confidence 999999999999999999998886432 24578889999999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
||+++....... ......++..|++||.+.+ ..++...|+|+.|++ .+..++|+.
T Consensus 144 ~g~~~~~~~~~~-----------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~-------l~~l~~g~~ 199 (284)
T cd07836 144 FGLARAFGIPVN-----------TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCI-------MAEMITGRP 199 (284)
T ss_pred cchhhhhcCCcc-----------ccccccccccccChHHhcCCCCCCcHHHHHHHHHH-------HHHHHhCCC
Confidence 999975432100 0011236778999998765 456778999999987 666777754
No 372
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.84 E-value=3.7e-22 Score=228.42 Aligned_cols=188 Identities=20% Similarity=0.147 Sum_probs=151.3
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||.||+|.+.. ....+..+|+|.+....... ....+. +|+.+++.++||||+++++++...
T Consensus 1 ~~ig~g~~g~v~~~~~~~---~~~~~~~~~ik~~~~~~~~~-~~~~~~--------~e~~~l~~~~~~~i~~~~~~~~~~ 68 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKG---KDGKTTEVAVKTLKEDASEE-ERKDFL--------KEARVMKKLGHPNVVRLLGVCTEE 68 (262)
T ss_pred CccccCCceEEEEEEEec---CCCCCceEEeEeeccccchh-HHHHHH--------HHHHHHhhcCCCChheeeeeecCC
Confidence 469999999999988631 11237889999987643322 223333 599999999999999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCc-------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 248 GLITSVIPKTPY-TLENILQFSP-------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~-------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
...++||||+++ +|.+++.... ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 69 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~--~~~l 146 (262)
T cd00192 69 EPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDL--VVKI 146 (262)
T ss_pred CceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCC--cEEE
Confidence 999999999975 9999998531 35689999999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
+|||.++......... ......++..|+|||.+....++...|+|+.|++
T Consensus 147 ~dfg~~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 196 (262)
T cd00192 147 SDFGLSRDVYDDDYYR---------KKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVL 196 (262)
T ss_pred cccccccccccccccc---------cccCCCcCccccCHHHhccCCcchhhccHHHHHH
Confidence 9999998654311100 0112336778999999988888999999999987
No 373
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.84 E-value=2.5e-22 Score=234.32 Aligned_cols=192 Identities=16% Similarity=0.132 Sum_probs=149.1
Q ss_pred eeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccc-cchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 169 FIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQES-KNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 169 ~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~-~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
.||+|+||.||+|++. .+++.||+|.+.+........ ..+.++ .+++..++...||||+++++++...
T Consensus 1 ~ig~g~~g~Vy~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~i~~~~~~~~~~ 69 (278)
T cd05606 1 IIGRGGFGEVYGCRKA------DTGKMYAMKCLDKKRIKMKQGETLALNE-----RIMLSLVSTGDCPFIVCMSYAFHTP 69 (278)
T ss_pred CcccCCCeEEEEEEEe------cCCCEEEEEEeeccccccchhHHHHHHH-----HHHHHHHHhCCCCcEeeeeeeeecC
Confidence 4899999999988752 468899999987653322111 111210 0123344556799999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCC
Q 000399 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~ 326 (1566)
+..|+||||++| +|.+++. ..+.+++..++.++.|++.||.|||+++|+||||||+||+++.++ .+||+|||+++
T Consensus 70 ~~~~~v~e~~~g~~L~~~l~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~--~~kl~dfg~~~ 145 (278)
T cd05606 70 DKLSFILDLMNGGDLHYHLS--QHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVRISDLGLAC 145 (278)
T ss_pred CEEEEEEecCCCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCC--CEEEccCcCcc
Confidence 999999999987 9988886 345688999999999999999999999999999999999999988 79999999987
Q ss_pred ccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
..... .. ....|+..|+|||++.+ ..++...|+|+.|++ .+..++|+.+
T Consensus 146 ~~~~~-------~~------~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~-------l~~l~~g~~p 195 (278)
T cd05606 146 DFSKK-------KP------HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM-------LFKLLRGHSP 195 (278)
T ss_pred ccCcc-------CC------cCcCCCcCCcCcHHhcCCCCCCcccchHhHHHH-------HHHHHhCCCC
Confidence 53311 00 12247889999999864 468889999999987 6677778754
No 374
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.84 E-value=2.4e-22 Score=234.53 Aligned_cols=198 Identities=14% Similarity=0.144 Sum_probs=154.2
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV 238 (1566)
..++|++.+.||+|+||.||+|.+. .++..+|+|++...... ..++. +|+.+++.+ +||||+
T Consensus 16 ~~~~~~~~~~lg~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~---~~~~~--------~e~~~l~~l~~h~~i~ 78 (286)
T cd06638 16 PSDTWEIIETIGKGTYGKVFKVLNK------KNGSKAAVKILDPIHDI---DEEIE--------AEYNILKALSDHPNVV 78 (286)
T ss_pred cccceeeeeeeccCCCcEEEEEEEC------CCCceeEEEeeccccch---HHHHH--------HHHHHHHHHhcCCCee
Confidence 3568999999999999999998763 46788999987542211 11222 488888888 699999
Q ss_pred ccccccc-----ccCceeeeccCCcc-chhhhhcc--CcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccc
Q 000399 239 PVLGLLK-----TSGLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLT 310 (1566)
Q Consensus 239 ~l~~~~~-----~~~~l~LV~E~~~g-sL~~~l~~--~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~ 310 (1566)
++++++. ..+..++||||+++ +|.+++.. .....+++..++.++.|++.||.|||+++|+||||||+||+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~ 158 (286)
T cd06638 79 KFYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT 158 (286)
T ss_pred eeeeeeeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC
Confidence 9999873 34579999999987 99988752 1234577888899999999999999999999999999999999
Q ss_pred ccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-----cchhhccccccccccCCchhhh
Q 000399 311 DSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-----MDWHSQFNRWWRGELSNFEYLL 385 (1566)
Q Consensus 311 ~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-----~~y~~~~d~Ws~G~isnfeyL~ 385 (1566)
.++ .+||+|||+++....... ......|++.|+|||++.. ..++.+.|+|+.|++
T Consensus 159 ~~~--~~kl~dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi------- 218 (286)
T cd06638 159 TEG--GVKLVDFGVSAQLTSTRL-----------RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGIT------- 218 (286)
T ss_pred CCC--CEEEccCCceeecccCCC-----------ccccccCCCcccChhhhchhhhccccccchhhhhhHHHH-------
Confidence 998 699999999875432100 0112348889999998853 347778999999987
Q ss_pred HHHhhcccc
Q 000399 386 FLNKLAGRR 394 (1566)
Q Consensus 386 ~ln~~agrs 394 (1566)
.+..+.|+.
T Consensus 219 ~~el~~g~~ 227 (286)
T cd06638 219 AIELGDGDP 227 (286)
T ss_pred HHHHhcCCC
Confidence 566666754
No 375
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.84 E-value=3e-22 Score=239.15 Aligned_cols=199 Identities=21% Similarity=0.290 Sum_probs=160.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|++. .++..+|+|.+..........+.+. +|+.+++.++||||+++++
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDK------RTGRKVAIKKISNVFDDLIDAKRIL--------REIKLLRHLRHENIIGLLD 66 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeC------CCCcEEEEEeeccccccchhhhhHH--------HHHHHHHhcCCcchhhhhh
Confidence 5889999999999999998853 4578899999876432222223333 5999999999999999999
Q ss_pred cccccC-----ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 243 LLKTSG-----LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 243 ~~~~~~-----~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
++...+ .+|+||||++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||++.++ .+
T Consensus 67 ~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~--~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~--~~ 142 (330)
T cd07834 67 ILRPPSPEDFNDVYIVTELMETDLHKVIKS--PQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNC--DL 142 (330)
T ss_pred hhcccCcccccceEEEecchhhhHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCC--CE
Confidence 998775 8999999999999999873 33688999999999999999999999999999999999999998 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhcccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+|+|||++......... . .......++..|+|||++.+. .++...|+|+.|++ .+..++|++
T Consensus 143 ~L~dfg~~~~~~~~~~~-----~---~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~i-------l~~l~~g~~ 205 (330)
T cd07834 143 KICDFGLARGVDPDEDE-----K---GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCI-------FAELLTRKP 205 (330)
T ss_pred EEcccCceEeecccccc-----c---ccccccccccCcCCceeeecccCCCcchhHHHHHHH-------HHHHHcCCC
Confidence 99999999865432110 0 001123478889999999877 78889999999987 666677754
No 376
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.84 E-value=4.8e-22 Score=220.12 Aligned_cols=201 Identities=18% Similarity=0.268 Sum_probs=163.2
Q ss_pred ccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCC
Q 000399 1326 HHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTG 1403 (1566)
Q Consensus 1326 H~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg 1403 (1566)
..+.|.|+.. |+..++||+. |+||+|||..+-.|...+.||++.|.|+.|.. +.++|| |.+|++||+.+|
T Consensus 196 ~skgVYClQY--DD~kiVSGlr----DnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~--rviisGSSDsTvrvWDv~tg 267 (499)
T KOG0281|consen 196 NSKGVYCLQY--DDEKIVSGLR----DNTIKIWDKNSLECLKILTGHTGSVLCLQYDE--RVIVSGSSDSTVRVWDVNTG 267 (499)
T ss_pred cCCceEEEEe--cchhhhcccc----cCceEEeccccHHHHHhhhcCCCcEEeeeccc--eEEEecCCCceEEEEeccCC
Confidence 4578888886 5567999998 99999999999999999999999999998744 577888 999999999999
Q ss_pred cEEEEeecccccccccC---------CCCCcccccccCCCC----CCCCcccccccccccccchhHHHhhhhhccceEEE
Q 000399 1404 KLLSVFAEQSMDSLHGG---------SPSSSISKINTDQVG----MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVV 1470 (1566)
Q Consensus 1404 ~~l~~l~~h~~~~~~~~---------~~~~~~~~~~~~~~~----~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~s 1470 (1566)
+++.++-.|...+.+.- +-+..+.+|+..... +-.+.+|-..|+.+.|+ .+++++
T Consensus 268 e~l~tlihHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd------------~kyIVs 335 (499)
T KOG0281|consen 268 EPLNTLIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD------------DKYIVS 335 (499)
T ss_pred chhhHHhhhcceeEEEEEeCCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc------------cceEEE
Confidence 99999988876644433 333344445433222 11245677778888886 459999
Q ss_pred EecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEe
Q 000399 1471 GIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW 1550 (1566)
Q Consensus 1471 gs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l 1550 (1566)
+|.|.||++||+.++.+++++.+|.. -|-|+.+ .|+++++||+|.+|++||+..|++++.+
T Consensus 336 ASgDRTikvW~~st~efvRtl~gHkR------GIAClQY-------------r~rlvVSGSSDntIRlwdi~~G~cLRvL 396 (499)
T KOG0281|consen 336 ASGDRTIKVWSTSTCEFVRTLNGHKR------GIACLQY-------------RDRLVVSGSSDNTIRLWDIECGACLRVL 396 (499)
T ss_pred ecCCceEEEEeccceeeehhhhcccc------cceehhc-------------cCeEEEecCCCceEEEEeccccHHHHHH
Confidence 99999999999999999999998843 3344444 4579999999999999999999999999
Q ss_pred eccCceeeEeeeecc
Q 000399 1551 RAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1551 ~gH~~~V~~Vafspd 1565 (1566)
+||+.-|+++.|...
T Consensus 397 eGHEeLvRciRFd~k 411 (499)
T KOG0281|consen 397 EGHEELVRCIRFDNK 411 (499)
T ss_pred hchHHhhhheeecCc
Confidence 999999999999764
No 377
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.84 E-value=2.5e-21 Score=237.80 Aligned_cols=227 Identities=14% Similarity=0.225 Sum_probs=173.0
Q ss_pred cCCCceec--cCCCCCCCCCcccccccCccCCCCceEee--------------------------------e--------
Q 000399 1281 KCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA--------------------------------S-------- 1318 (1566)
Q Consensus 1281 ~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~--------------------------------~-------- 1318 (1566)
.|.+.||+ ||+||++ ||+||.|+.|+||.+.. .
T Consensus 265 ah~gaIw~mKFS~DGKy-----LAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~ 339 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKY-----LASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSS 339 (712)
T ss_pred ccCCcEEEEEeCCCCce-----eeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccccccccc
Confidence 69999999 9999999 99999999999998755 0
Q ss_pred ---------------------eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEeccccccccccccccccc
Q 000399 1319 ---------------------ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVN 1377 (1566)
Q Consensus 1319 ---------------------~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~ 1377 (1566)
.++.+.||.+.|.+++||.+ ++|+|+|. |+|||||++...+|+++|. |.+.|+
T Consensus 340 ~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSM----DKTVRLWh~~~~~CL~~F~-HndfVT 413 (712)
T KOG0283|consen 340 RKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSM----DKTVRLWHPGRKECLKVFS-HNDFVT 413 (712)
T ss_pred ccccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccc----cccEEeecCCCcceeeEEe-cCCeeE
Confidence 23478899999999999975 58899998 9999999999999999996 999999
Q ss_pred ceEEeecC-Cceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCccccccc----------CCCCCCC-----C
Q 000399 1378 DICVLSSS-GRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINT----------DQVGMLN-----S 1439 (1566)
Q Consensus 1378 sVafsp~g-~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~----------~~~~~~~-----~ 1439 (1566)
||+|+|-. ++++|| ||.||||++...+.+.=.+.+.-....+..+++...++.. .+..... .
T Consensus 414 cVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~ 493 (712)
T KOG0283|consen 414 CVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRL 493 (712)
T ss_pred EEEecccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEee
Confidence 99999965 577898 9999999998777665444332222233344443333321 1111110 0
Q ss_pred c----ccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcc
Q 000399 1440 N----TLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKM 1515 (1566)
Q Consensus 1440 ~----~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~ 1515 (1566)
. .....|+.+.|.|. +...+++.+.|..|||+|.++-..++.|+|..+.- + -
T Consensus 494 ~~~Kk~~~~rITG~Q~~p~---------~~~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~---S------------Q 549 (712)
T KOG0283|consen 494 HNKKKKQGKRITGLQFFPG---------DPDEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTS---S------------Q 549 (712)
T ss_pred ccCccccCceeeeeEecCC---------CCCeEEEecCCCceEEEeccchhhhhhhcccccCC---c------------c
Confidence 0 01236888888876 23468888999999999999999999999874421 0 1
Q ss_pred cCCCcccchhHHHhccCCCceeEEeec
Q 000399 1516 QAGGAVASPSWIAAGLSSGQCRLFDVR 1542 (1566)
Q Consensus 1516 ~~~~~spdg~~LaSGs~Dg~I~lWD~~ 1542 (1566)
....|+.||++|++|++|..|++|+..
T Consensus 550 ~~Asfs~Dgk~IVs~seDs~VYiW~~~ 576 (712)
T KOG0283|consen 550 ISASFSSDGKHIVSASEDSWVYIWKND 576 (712)
T ss_pred eeeeEccCCCEEEEeecCceEEEEeCC
Confidence 234577899999999999999999974
No 378
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.84 E-value=3.3e-22 Score=234.18 Aligned_cols=202 Identities=15% Similarity=0.125 Sum_probs=158.0
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcc-cCCCcccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l 240 (1566)
+|++.+.||+|+||.||+|++. +...++..+|+|++....... ....+... +|+.+|+.+ +||||+++
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~---~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~-------~e~~~l~~l~~~~~i~~~ 70 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKV---SGHDSGKLYAMKVLKKATIVQKAKTTEHTR-------TERQVLEHIRQSPFLVTL 70 (290)
T ss_pred CceeeeeeccCCcceEEEEEec---cCCCCCceEEEEEeehhhhhhcchHHHHHH-------HHHHHHHhcccCCChhce
Confidence 4888999999999999987752 223468889999987543211 11111222 588999999 59999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+..+..+|+||||+++ +|.+++.. ...+++..+..++.|++.||.|||++|++||||||+|||++.++ .+||
T Consensus 71 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~--~~kl 146 (290)
T cd05613 71 HYAFQTDTKLHLILDYINGGELFTHLSQ--RERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNG--HVVL 146 (290)
T ss_pred eeEeecCCeEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCC--CEEE
Confidence 9999999999999999997 99999873 34578888999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc--chhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM--DWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~--~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++........ ......|+..|+|||.+... .++...|+|+.|++ .+..++|+.+
T Consensus 147 ~dfg~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~-------l~~ll~g~~p 207 (290)
T cd05613 147 TDFGLSKEFHEDEVE----------RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVL-------MYELLTGASP 207 (290)
T ss_pred eeCccceeccccccc----------ccccccCCcccCChhhccCCCCCCCccccHHHHHHH-------HHHHhcCCCC
Confidence 999999854321000 01123478889999998653 46678999999987 6677778754
No 379
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.84 E-value=3.8e-22 Score=228.49 Aligned_cols=196 Identities=16% Similarity=0.170 Sum_probs=159.5
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc---ccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG---QESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~---~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
+|+..+.||+|+||+||+|.+. .++..+++|.+....... +..+++. +|+.+++.++||||++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~ 66 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNL------DDGDFFAVKEVSLADDGQTGQEAVKQLE--------QEIALLSKLQHPNIVQ 66 (258)
T ss_pred CccccceeeecCCceEEEEEEc------CCCcEEEEEEEEEccccccchHHHHHHH--------HHHHHHHhcCCCCchh
Confidence 4778899999999999988752 468889999987643221 1222233 6999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++++.....+|+||||+++ +|.+++.. ...+++..+..++.||+.||.|||+.||+||||||+||+++.++ .+|
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~--~~k 142 (258)
T cd06632 67 YLGTEREEDNLYIFLELVPGGSLAKLLKK--YGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNG--VVK 142 (258)
T ss_pred eeeeEecCCeEEEEEEecCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCC--CEE
Confidence 99999999999999999987 99999973 34477888889999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc-hhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD-WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~-y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||+++...... ......++..|++||.+.... ++..+|.|+.|++ .+..++|+.+
T Consensus 143 l~d~~~~~~~~~~~------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~-------l~~l~~g~~p 201 (258)
T cd06632 143 LADFGMAKQVVEFS------------FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCT-------VLEMATGKPP 201 (258)
T ss_pred EccCccceeccccc------------cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHH-------HHHHHhCCCC
Confidence 99999988643211 011234788899999887666 8889999999987 6777777654
No 380
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.84 E-value=2.2e-22 Score=235.16 Aligned_cols=196 Identities=15% Similarity=0.164 Sum_probs=160.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||+||++.+. .++..+|+|++.... .....+.+. +|+++++.++||||+++
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~------~~~~~~a~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~h~~i~~~ 68 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHI------PTGTVMAKKVVHIGA-KSSVRKQIL--------RELQIMHECRSPYIVSF 68 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEc------CCCcEEEEEEEEecC-cchHHHHHH--------HHHHHHHHcCCCCcceE
Confidence 357999999999999999988752 468889999886532 122223333 59999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
++++...+.+|+||||+++ +|.+++.. .+.++...++.++.|++.||.|||+ .+++||||||+||+++.++ .++
T Consensus 69 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~--~~~ 144 (284)
T cd06620 69 YGAFLNENNICMCMEFMDCGSLDRIYKK--GGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRG--QIK 144 (284)
T ss_pred eeeEecCCEEEEEEecCCCCCHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCC--cEE
Confidence 9999999999999999997 99888873 3457888899999999999999997 6999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||+++..... .. ....|+..|+|||++.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 145 l~d~gl~~~~~~~------~~-------~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~-------l~~l~tg~~p 201 (284)
T cd06620 145 LCDFGVSGELINS------IA-------DTFVGTSTYMSPERIQGGKYTVKSDVWSLGIS-------IIELALGKFP 201 (284)
T ss_pred EccCCcccchhhh------cc-------CccccCcccCCHHHHccCCCCccchHHHHHHH-------HHHHHhCCCC
Confidence 9999998743210 00 11247888999999988888889999999987 6666777654
No 381
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.84 E-value=2.7e-22 Score=230.17 Aligned_cols=199 Identities=17% Similarity=0.170 Sum_probs=160.9
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||.|+||.||++.+. .++..+|+|.+...........++. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRK------SDGKILVWKEIDYGNMTEKEKQQLV--------SEVNILRELKHPNIVRYYD 66 (265)
T ss_pred CceeeeeeccCCCeEEEEeeec------CCCCEEEEEEEecccCCHHHHHHHH--------HHHHHHHhcCCCccceeee
Confidence 5889999999999999998863 5678899999876544333333344 5899999999999999999
Q ss_pred cccc--cCceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHh-----hccccCCCccCCCcccccc
Q 000399 243 LLKT--SGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLH-----SLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 243 ~~~~--~~~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH-----~~gIiHrDLKp~NILl~~~ 312 (1566)
++.. ...+|++|||+++ +|.+++... ....+++..++.++.||+.||.||| +.+|+||||||+||+++.+
T Consensus 67 ~~~~~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~ 146 (265)
T cd08217 67 RIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDAN 146 (265)
T ss_pred eeecCCCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecC
Confidence 8754 4568999999986 999998642 2345788889999999999999999 8999999999999999998
Q ss_pred chhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcc
Q 000399 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~ag 392 (1566)
+ .+||+|||+++....... ......+++.|++||++.+..++...|.|+.|++ .+..+.|
T Consensus 147 ~--~~kl~d~g~~~~~~~~~~-----------~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~i-------l~~l~~g 206 (265)
T cd08217 147 N--NVKLGDFGLAKILGHDSS-----------FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCL-------IYELCAL 206 (265)
T ss_pred C--CEEEecccccccccCCcc-----------cccccccCCCccChhhhcCCCCCchhHHHHHHHH-------HHHHHHC
Confidence 8 799999999986442110 0112347888999999988888889999999987 6667778
Q ss_pred ccc
Q 000399 393 RRW 395 (1566)
Q Consensus 393 rs~ 395 (1566)
+.+
T Consensus 207 ~~p 209 (265)
T cd08217 207 SPP 209 (265)
T ss_pred CCc
Confidence 754
No 382
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.84 E-value=3.4e-22 Score=239.33 Aligned_cols=202 Identities=17% Similarity=0.194 Sum_probs=153.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVL 241 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l~ 241 (1566)
+|++.+.||+|+||.||++++.. ...+..+|+|.+..........+.++ +|+.+++++ +||||++++
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~----~~~~~~~aiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~~h~~iv~~~ 68 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAE----TSEEETVAIKKITNVFSKKILAKRAL--------RELKLLRHFRGHKNITCLY 68 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCC----CCcCceEEEEEeccccccchhHHHHH--------HHHHHHHHhcCCCChheee
Confidence 48889999999999999988631 11277899999865322211122233 589999998 599999999
Q ss_pred ccccc----cCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhh
Q 000399 242 GLLKT----SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 242 ~~~~~----~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
+.+.. ...+|++|||++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .+
T Consensus 69 ~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~--~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~--~~ 144 (332)
T cd07857 69 DMDIVFPGNFNELYLYEELMEADLHQIIRS--GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADC--EL 144 (332)
T ss_pred eeeeeccccCCcEEEEEecccCCHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCC--CE
Confidence 87543 246889999999999999863 44578999999999999999999999999999999999999998 79
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
||+|||+++......... ........|+..|+|||++.+ ..++..+|+|+.|++ .+..++|+.
T Consensus 145 kl~Dfg~a~~~~~~~~~~-------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~-------l~~l~~g~~ 208 (332)
T cd07857 145 KICDFGLARGFSENPGEN-------AGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCI-------LAELLGRKP 208 (332)
T ss_pred EeCcCCCceecccccccc-------cccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHH-------HHHHHhCCc
Confidence 999999998644211110 001123458889999998754 467889999999987 455556654
No 383
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.84 E-value=1.6e-22 Score=235.43 Aligned_cols=205 Identities=16% Similarity=0.127 Sum_probs=156.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||+|.+.- .....+..+++|.+... ........+. +|+.+|+.++||||+++
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~--~~~~~~~~v~~k~~~~~-~~~~~~~~~~--------~e~~~l~~l~h~ni~~~ 73 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILID--EKPGKEEEVFVKTVKDH-ASEIQVTLLL--------QESCLLYGLSHQNILPI 73 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEec--CCCCceeEEEEEEccCC-CCHHHHHHHH--------HHHHHHHhCCCCCCCeE
Confidence 4579999999999999999988531 00113678899987643 2222223333 59999999999999999
Q ss_pred cccccc-cCceeeeccCCcc-chhhhhccCcc------cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 241 LGLLKT-SGLITSVIPKTPY-TLENILQFSPN------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 241 ~~~~~~-~~~l~LV~E~~~g-sL~~~l~~~~~------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
++++.. ....++++||+++ +|.+++...+. ..+++..+..++.|++.||.|||+++++||||||+||+++.+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~ 153 (280)
T cd05043 74 LHVCIEDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEE 153 (280)
T ss_pred EEEEecCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCC
Confidence 998765 5678899999985 99999864322 347888899999999999999999999999999999999998
Q ss_pred chhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-
Q 000399 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA- 391 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a- 391 (1566)
+ .+||+|||+++......... ......++..|+|||.+.+..++...|+|+.|++ .+..++
T Consensus 154 ~--~~kl~d~g~~~~~~~~~~~~---------~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~-------l~el~~~ 215 (280)
T cd05043 154 L--QVKITDNALSRDLFPMDYHC---------LGDNENRPVKWMALESLVNKEYSSASDVWSFGVL-------LWELMTL 215 (280)
T ss_pred C--cEEECCCCCcccccCCceEE---------eCCCCCcchhccCHHHHhcCCCCchhhHHHhHHH-------HHHHhcC
Confidence 8 79999999998543211000 0111235667999999988888999999999987 555555
Q ss_pred ccc
Q 000399 392 GRR 394 (1566)
Q Consensus 392 grs 394 (1566)
|+.
T Consensus 216 g~~ 218 (280)
T cd05043 216 GQT 218 (280)
T ss_pred CCC
Confidence 554
No 384
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.84 E-value=1.7e-22 Score=235.04 Aligned_cols=204 Identities=16% Similarity=0.197 Sum_probs=165.2
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccC------C
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH------P 235 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~H------p 235 (1566)
.+|.+....|+|-|+.|..|.+. ..+..||||+|..+..... +-++|++||++|+. -
T Consensus 432 ~RY~V~~~~GkGvFs~Vvra~D~------~r~~~vAiKIIRnNE~M~K-----------tGl~EleiLkKL~~AD~Edk~ 494 (752)
T KOG0670|consen 432 SRYEVQGYTGKGVFSTVVRARDQ------ARGQEVAIKIIRNNEVMHK-----------TGLKELEILKKLNDADPEDKF 494 (752)
T ss_pred ceeEEEeccccceeeeeeecccc------CCCCeeEEEEeecchHHhh-----------hhhHHHHHHHHhhccCchhhh
Confidence 38999999999999999999974 4566999999998754432 23479999999952 4
Q ss_pred CcccccccccccCceeeeccCCccchhhhhcc-CcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch
Q 000399 236 NVAPVLGLLKTSGLITSVIPKTPYTLENILQF-SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1566)
Q Consensus 236 NIV~l~~~~~~~~~l~LV~E~~~gsL~~~l~~-~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~ 314 (1566)
++++|+-.|...+++|||+|-+.-+|.++|+. ..+-.+....++.|++|+..||..|-..||+|.||||.|||+++..+
T Consensus 495 Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~ 574 (752)
T KOG0670|consen 495 HCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKN 574 (752)
T ss_pred HHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcc
Confidence 89999999999999999999999999999984 33445788899999999999999999999999999999999999875
Q ss_pred hhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 315 ~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
.+||||||.|..... ...++.+ -+.+|.|||++.+..|+...|.|+.||- .|+....--+|.|++
T Consensus 575 -iLKLCDfGSA~~~~e-----neitPYL--------VSRFYRaPEIiLG~~yd~~iD~WSvgct-LYElYtGkIlFpG~T 639 (752)
T KOG0670|consen 575 -ILKLCDFGSASFASE-----NEITPYL--------VSRFYRAPEIILGLPYDYPIDTWSVGCT-LYELYTGKILFPGRT 639 (752)
T ss_pred -eeeeccCcccccccc-----ccccHHH--------HHHhccCcceeecCcccCCccceeecee-eEEeeccceecCCCC
Confidence 899999999986552 1222222 4567999999999999999999999985 333333333344444
Q ss_pred cCC
Q 000399 395 WGD 397 (1566)
Q Consensus 395 ~~d 397 (1566)
.|+
T Consensus 640 NN~ 642 (752)
T KOG0670|consen 640 NNQ 642 (752)
T ss_pred cHH
Confidence 443
No 385
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.84 E-value=4.1e-22 Score=229.09 Aligned_cols=195 Identities=18% Similarity=0.151 Sum_probs=150.2
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||.||+|... .....+..+|+|.+...... ....++. +|+.+++.+.||||+++++++..
T Consensus 1 ~~ig~G~~g~v~~~~~~---~~~~~~~~~~iK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~~- 67 (257)
T cd05060 1 KELGHGNFGSVVKGVYL---MKSGKEVEVAVKTLKQEHIA-AGKKEFL--------REASVMAQLDHPCIVRLIGVCKG- 67 (257)
T ss_pred CccCccCceeEEEeEee---ccCCCcceEEEEecccccch-HHHHHHH--------HHHHHHHhcCCCCeeeEEEEEcC-
Confidence 47999999999988742 11123478999998765432 2233344 59999999999999999998764
Q ss_pred CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCC
Q 000399 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~ 326 (1566)
+..++||||+++ +|.+++... ..+++..+..++.|++.||.|||+++++||||||+|||++.++ .+||+|||+++
T Consensus 68 ~~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~--~~kl~df~~~~ 143 (257)
T cd05060 68 EPLMLVMELAPLGPLLKYLKKR--REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRH--QAKISDFGMSR 143 (257)
T ss_pred CceEEEEEeCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCC--cEEeccccccc
Confidence 468999999986 999999743 3578889999999999999999999999999999999999998 79999999998
Q ss_pred ccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
......... .......++..|+|||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 144 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~-------l~~~~~~g~~ 197 (257)
T cd05060 144 ALGAGSDYY--------RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVT-------LWEAFSYGAK 197 (257)
T ss_pred eeecCCccc--------ccccCccccccccCHHHhcCCCCCccchHHHHHHH-------HHHHHcCCCC
Confidence 643211100 00011123457999999988889999999999987 566664 544
No 386
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.83 E-value=3.3e-22 Score=228.93 Aligned_cols=195 Identities=15% Similarity=0.186 Sum_probs=161.3
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++.+.||+|+||.||+|... .++..+++|.+..... ..++. +|+.+++.++||||++++
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~----~~~~~--------~e~~~~~~l~~~~i~~~~ 64 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHK------ETGQVVAIKVVPVEED----LQEII--------KEISILKQCDSPYIVKYY 64 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEc------CCCcEEEEEEeecHHH----HHHHH--------HHHHHHHhCCCCcEeeee
Confidence 57999999999999999988753 3578899999865422 23333 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+.+...+|+++||+++ +|.+++... ...+++..++.++.|++.||.|||+.+|+||||+|+||+++.++ .+||+
T Consensus 65 ~~~~~~~~~~l~~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~--~~~l~ 141 (256)
T cd06612 65 GSYFKNTDLWIVMEYCGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEG--QAKLA 141 (256)
T ss_pred eeeecCCcEEEEEecCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCC--cEEEc
Confidence 999999999999999997 999998632 34578889999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||++........ . .....++..|+|||++.+..++.+.|+|+.|+| .+..+.|+.+
T Consensus 142 dfg~~~~~~~~~~-----~------~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~i-------l~~l~~g~~p 198 (256)
T cd06612 142 DFGVSGQLTDTMA-----K------RNTVIGTPFWMAPEVIQEIGYNNKADIWSLGIT-------AIEMAEGKPP 198 (256)
T ss_pred ccccchhcccCcc-----c------cccccCCccccCHHHHhcCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 9999986442100 0 112236788999999988888889999999988 6666777654
No 387
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.83 E-value=2.1e-22 Score=236.91 Aligned_cols=195 Identities=16% Similarity=0.183 Sum_probs=158.0
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+.|.....||+|+||.||++.+. .++..+|||.+.... ......+. +|+.+++.++||||++++
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~------~~~~~vaiK~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~ii~~~ 85 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEK------HTGKQVAVKKMDLRK--QQRRELLF--------NEVVIMRDYHHENVVDMY 85 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEEC------CCCCEEEEEEEecch--HHHHHHHH--------HHHHHHHhCCCCcHHHHH
Confidence 45666788999999999988752 467889999876432 12222233 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+...+..|+||||+++ +|.+++.. +.+++..++.++.||+.||.|||++||+||||||+||+++.++ .+||+
T Consensus 86 ~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~--~~kL~ 160 (292)
T cd06658 86 NSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDG--RIKLS 160 (292)
T ss_pred HheecCCeEEEEEeCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCC--CEEEc
Confidence 999999999999999987 89888852 3478888999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||++....... .. .....++..|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 161 dfg~~~~~~~~~----~~-------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvi-------l~el~~g~~p 217 (292)
T cd06658 161 DFGFCAQVSKEV----PK-------RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIM-------VIEMIDGEPP 217 (292)
T ss_pred cCcchhhccccc----cc-------CceeecCccccCHHHHccCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 999987543210 00 012247888999999988888899999999987 6677778754
No 388
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.83 E-value=3.7e-22 Score=239.44 Aligned_cols=204 Identities=22% Similarity=0.339 Sum_probs=159.2
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVA 238 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV 238 (1566)
+.++|++.+.||+|+||.||+|.+. .++..+|+|.+.+..........+ .+|+.+++++ +||||+
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~------~~~~~~~vK~~~~~~~~~~~~~~~--------~~E~~~l~~l~~h~ni~ 70 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDR------RTKEVVALKKIFDAFRNATDAQRT--------FREIMFLQELGDHPNIV 70 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEc------CCCeEEEEEeeccccCcchhhhhh--------hHHHHHHHHhcCCCCcc
Confidence 4678999999999999999998753 467889999886532222222222 2699999999 999999
Q ss_pred ccccccccc--CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 239 PVLGLLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 239 ~l~~~~~~~--~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
++++++... ..+|+||||++++|.+++... .+.+..++.++.||+.||.|||++||+||||||+||+++.++ .
T Consensus 71 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~--~ 145 (337)
T cd07852 71 KLLNVIKAENDKDIYLVFEYMETDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDC--R 145 (337)
T ss_pred ceeeeeccCCCceEEEEecccccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCC--c
Confidence 999998654 368999999999999988732 567778888999999999999999999999999999999999 7
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+||+|||+++......... ... ......|+..|+|||++.+ ..++...|+|+.|++ .+..++|+..
T Consensus 146 ~kl~d~g~~~~~~~~~~~~--~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~-------l~el~tg~~p 212 (337)
T cd07852 146 VKLADFGLARSLSELEENP--ENP----VLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCI-------LGEMLLGKPL 212 (337)
T ss_pred EEEeeccchhccccccccc--cCc----chhcccccccccCceeeeccccccccchHHHHHHH-------HHHHHhCCCC
Confidence 9999999998654211110 000 1122357889999998754 456788999999987 6777777653
No 389
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.83 E-value=6e-22 Score=228.94 Aligned_cols=202 Identities=18% Similarity=0.178 Sum_probs=152.4
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||.||+|+++........+..+|+|.+.+.. ......++. +|+.+|+.++||||+++++++...
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~i~~~~~~~~~~ 71 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA-TDQEKKEFL--------KEAHLMSNFNHPNIVKLLGVCLLN 71 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc-chhhHHHHH--------HHHHHHHhcCCCCeeeEeeeecCC
Confidence 46899999999998864211112345789999886542 122233444 599999999999999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCc-----ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc---hhhhh
Q 000399 248 GLITSVIPKTPY-TLENILQFSP-----NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC---WSWLY 318 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~-----~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~---~~~vK 318 (1566)
+..++||||+++ +|.+++.... ...++...+..++.|++.||.|||+++++||||||+||+++.++ ...+|
T Consensus 72 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~ 151 (269)
T cd05044 72 EPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVK 151 (269)
T ss_pred CCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceE
Confidence 999999999986 9999986421 22367788889999999999999999999999999999998765 12589
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc-ccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA-GRR 394 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a-grs 394 (1566)
|+|||+++.......... .....++..|+|||.+.+..++...|+|+.|++ .+..++ |+.
T Consensus 152 l~dfg~~~~~~~~~~~~~---------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i-------l~ellt~g~~ 212 (269)
T cd05044 152 IGDFGLARDIYKSDYYRK---------EGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVL-------MWEILTLGQQ 212 (269)
T ss_pred ECCccccccccccccccc---------CcccCCCccccCHHHHccCCcccchhHHHHHHH-------HHHHHHcCCC
Confidence 999999985432111000 011124567999999988889999999999987 555554 543
No 390
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.83 E-value=4.5e-22 Score=228.21 Aligned_cols=186 Identities=18% Similarity=0.194 Sum_probs=150.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|++.+.||+|+||.||++.+ .++..+|+|.+...... ..++. +|+++++.++||||++++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~-------~~~~~~~~k~~~~~~~~---~~~~~--------~e~~~l~~l~~~~i~~~~ 65 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYW-------LEKRKVAIKTIREGAMS---EEDFI--------EEAQVMMKLSHPKLVQLY 65 (256)
T ss_pred hHeEEEeeecCcccceEEEEEE-------eCCCeEEEEECCCCCCC---HHHHH--------HHHHHHHhCCCCCeeeEE
Confidence 4789999999999999998764 23567899987654322 12344 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++......++||||+++ +|.+++... .+.+++..++.++.|++.|+.|||+++++||||||+||+++.++ .+||+
T Consensus 66 ~~~~~~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~--~~~l~ 142 (256)
T cd05112 66 GVCTERSPICLVFEFMEHGCLSDYLRAQ-RGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQ--VVKVS 142 (256)
T ss_pred EEEccCCceEEEEEcCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCC--eEEEC
Confidence 999999999999999987 999998742 33567888899999999999999999999999999999999888 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||+++...... .. ...+..++..|+|||.+.+..++..+|+|+.|++
T Consensus 143 d~g~~~~~~~~~-----~~-----~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~ 190 (256)
T cd05112 143 DFGMTRFVLDDQ-----YT-----SSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVL 190 (256)
T ss_pred CCcceeecccCc-----cc-----ccCCCccchhhcCHhHhccCCcChHHHHHHHHHH
Confidence 999987543110 00 0111224567999999988888999999999987
No 391
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.83 E-value=5.9e-22 Score=229.68 Aligned_cols=187 Identities=14% Similarity=0.095 Sum_probs=138.7
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||.||++... .......+++|.+.... .......++ +|+.+++.++||||+++++.+.+.
T Consensus 1 ~~lg~G~~g~v~~~~~~----~~~~~~~~~~k~~~~~~-~~~~~~~~~--------~e~~~~~~l~h~~iv~~~~~~~~~ 67 (268)
T cd05086 1 QEIGNGWFGKVLLSEIY----TDTGVARVVVKELKANA-SSKEQNEFL--------QQGDPYRILQHPNILQCLGQCVEA 67 (268)
T ss_pred CcCCCCcCceEEEEEEE----cCCCcceEEEEEecCCC-ChHHHHHHH--------HHHHHHhccCCcchhheEEEecCC
Confidence 36999999999987631 01223445566654432 122233444 588899999999999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCc--ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 248 GLITSVIPKTPY-TLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~--~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
...|+||||+++ +|.++++... ....+...++.++.||+.||.|||+++|+||||||+|||++.++ .+||+|||+
T Consensus 68 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~--~~~l~Dfg~ 145 (268)
T cd05086 68 IPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDL--TVKVGDYGI 145 (268)
T ss_pred CccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCc--cEEeccccc
Confidence 999999999996 9999997432 12345566788999999999999999999999999999999988 799999999
Q ss_pred CCccccccccCCCCCCceeeeecCCcccccccccccccc-------cchhhcccccccccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-------MDWHSQFNRWWRGEL 378 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-------~~y~~~~d~Ws~G~i 378 (1566)
++......... ......++..|+|||++.. ..++...|+|+.|++
T Consensus 146 ~~~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~ 197 (268)
T cd05086 146 GPSRYKEDYIE---------TEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVT 197 (268)
T ss_pred ccccCcchhhh---------cccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHH
Confidence 86422110000 0112346788999998753 234668999999987
No 392
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.83 E-value=5e-22 Score=230.55 Aligned_cols=195 Identities=16% Similarity=0.120 Sum_probs=153.0
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|++++.||+|+||.||+|+.+.. ........+++|.+..... .....++. +|++++++++||||++++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~-~~~~~~~~~~~k~~~~~~~-~~~~~~~~--------~E~~~l~~l~h~~iv~~~ 74 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGI-EEEGGETLVLVKALQKTKD-ENLQSEFR--------RELDMFRKLSHKNVVRLL 74 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccC-CcCCCcceEEEEccCCccc-hHHHHHHH--------HHHHHHHhcCCcceeeeE
Confidence 5799999999999999999885321 1123456788988754321 11122333 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcc-------cccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPN-------ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~-------~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~ 313 (1566)
+++.+.+..|+||||+++ +|.+++..... ..++...+..++.|++.||.|||+++|+||||||+||+++.++
T Consensus 75 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~ 154 (275)
T cd05046 75 GLCREAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQR 154 (275)
T ss_pred EEECCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCC
Confidence 999999999999999995 99999974331 1578889999999999999999999999999999999999988
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
.++|+|||+++........ . .....++..|++||.+.+..+....|+|+.|++
T Consensus 155 --~~~l~~~~~~~~~~~~~~~----~------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~ 207 (275)
T cd05046 155 --EVKVSLLSLSKDVYNSEYY----K------LRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVL 207 (275)
T ss_pred --cEEEcccccccccCccccc----c------cCCceeEEeecChhhhccCCCCchhhHHHHHHH
Confidence 7999999998743311000 0 011235667999999888788889999999987
No 393
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.83 E-value=2.7e-22 Score=236.95 Aligned_cols=190 Identities=17% Similarity=0.190 Sum_probs=146.9
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchh----hccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCC
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDC----VLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPN 236 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~----~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpN 236 (1566)
.++|+..+.||+|+||.||+|.+. .++ ..+|+|.+..... .....++. +|+.+++.++|||
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~------~~~~~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~~~~l~h~n 70 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWV------PEGETVKIPVAIKILNETTG-PKANVEFM--------DEALIMASMDHPH 70 (303)
T ss_pred hhhceeccccccCCCccEEEEEEe------cCCCcceeeEEEEeccccCC-HHHHHHHH--------HHHHHHHhCCCCC
Confidence 357899999999999999998752 223 3468887754321 12122333 5889999999999
Q ss_pred cccccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 237 VAPVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 237 IV~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
|+++++++... ..++|+||+++ +|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++.++
T Consensus 71 iv~~~~~~~~~-~~~~v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~-- 146 (303)
T cd05110 71 LVRLLGVCLSP-TIQLVTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPN-- 146 (303)
T ss_pred cccEEEEEcCC-CceeeehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCC--
Confidence 99999998754 46789999995 999998742 23467888899999999999999999999999999999999888
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
.+||+|||+++......... ......++..|+|||.+.+..++...|+|+.|++
T Consensus 147 ~~kL~Dfg~~~~~~~~~~~~---------~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~ 200 (303)
T cd05110 147 HVKITDFGLARLLEGDEKEY---------NADGGKMPIKWMALECIHYRKFTHQSDVWSYGVT 200 (303)
T ss_pred ceEEccccccccccCccccc---------ccCCCccccccCCHHHhccCCCChHHHHHHHHHH
Confidence 69999999998644211100 0111235667999999988888999999999977
No 394
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.83 E-value=6.1e-22 Score=237.04 Aligned_cols=195 Identities=20% Similarity=0.352 Sum_probs=156.5
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
+.++|++++.||+|+||.||+|.+. .++..+|+|.+.+........+.+. +|+.+++.++||||++
T Consensus 8 ~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~E~~~l~~l~hpniv~ 73 (328)
T cd07856 8 ITNRYVDLQPVGMGAFGLVCSARDQ------LTGQNVAIKKIMKPFSTPVLAKRTY--------RELKLLKHLRHENIIS 73 (328)
T ss_pred cccceEEEEeecccCCeEEEEEEEC------CCCCEEEEEEecccccccchhHHHH--------HHHHHHHhcCCCCeee
Confidence 4668999999999999999998863 5788999998865432222222333 5999999999999999
Q ss_pred ccccccc-cCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKT-SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~-~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
++++|.. ....|+||||++++|.++++ ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+|
T Consensus 74 ~~~~~~~~~~~~~lv~e~~~~~L~~~~~---~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~--~~~ 148 (328)
T cd07856 74 LSDIFISPLEDIYFVTELLGTDLHRLLT---SRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENC--DLK 148 (328)
T ss_pred EeeeEecCCCcEEEEeehhccCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCC--CEE
Confidence 9999865 56889999999889998886 23467778889999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhcccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|+|||+++..... .....++..|+|||.+.+ ..++...|+|+.|++ .+..+.|+.
T Consensus 149 l~dfg~~~~~~~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~i-------l~el~tg~~ 204 (328)
T cd07856 149 ICDFGLARIQDPQ--------------MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCI-------FAEMLEGKP 204 (328)
T ss_pred eCccccccccCCC--------------cCCCcccccccCceeeeccCCcCcHHHHHHHHHH-------HHHHHhCCC
Confidence 9999998743210 012236778999998765 567889999999987 555666654
No 395
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.83 E-value=5.8e-22 Score=230.48 Aligned_cols=193 Identities=21% Similarity=0.188 Sum_probs=153.0
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCcccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVLG 242 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~l~~ 242 (1566)
|++++.||+|+||.||+|.+. .++..+|+|.+.+...... ....+ +|+.++.++. ||||+++++
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~------~~~~~~aik~~~~~~~~~~-~~~~~--------~e~~~l~~l~~h~~i~~~~~ 65 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSR------KTGKYYAIKCMKKHFKSLE-QVNNL--------REIQALRRLSPHPNILRLIE 65 (282)
T ss_pred CceEeeccccccceEEEEEEc------CCCcEEEEEEehhccCCch-hhhHH--------HHHHHHhhcCCCCCccceEE
Confidence 678899999999999998863 4678899999875422221 11222 4888888885 999999999
Q ss_pred ccccc--CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 243 LLKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 243 ~~~~~--~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++.+. +.+++||||++++|.+.+... ...+++..++.++.|++.||.|||++||+||||||+||+++. + .+||+
T Consensus 66 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~--~~kl~ 141 (282)
T cd07831 66 VLFDRKTGRLALVFELMDMNLYELIKGR-KRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-D--ILKLA 141 (282)
T ss_pred EEecCCCCcEEEEEecCCccHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-C--CeEEE
Confidence 99887 899999999999888888742 245788899999999999999999999999999999999999 6 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCccccccccccccc-ccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|||+++....... .....++..|+|||.+. +..++..+|+|+.|++ .+..++|..
T Consensus 142 dfg~~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~-------l~el~~~~~ 197 (282)
T cd07831 142 DFGSCRGIYSKPP------------YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCV-------FFEILSLFP 197 (282)
T ss_pred ecccccccccCCC------------cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHH-------HHHHHcCCc
Confidence 9999986432100 01124678899999764 3456778999999987 666666654
No 396
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.83 E-value=6.1e-22 Score=227.94 Aligned_cols=196 Identities=18% Similarity=0.185 Sum_probs=147.1
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccc-c
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLK-T 246 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~-~ 246 (1566)
+.||+|+||.||+|.+. ........+|+|.+.... .......+. +|+.+++.++||||+++++++. .
T Consensus 1 ~~lg~g~~g~v~~~~~~---~~~~~~~~~aiK~~~~~~-~~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~~~~~ 68 (262)
T cd05058 1 RVIGKGHFGCVYHGTLI---DSDGQKIHCAVKSLNRIT-DLEEVEQFL--------KEGIIMKDFSHPNVLSLLGICLPS 68 (262)
T ss_pred CcccccCCceEEEEEEe---cCCCceEEEEEEecCccC-CHHHHHHHH--------HHHHHHccCCCCCcceEEEEeecC
Confidence 46899999999988742 112345679999875421 112223333 5888999999999999999765 4
Q ss_pred cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCC
Q 000399 247 SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLV 325 (1566)
Q Consensus 247 ~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA 325 (1566)
++..++||||+.+ +|.+++.... ...+...+..++.|++.||.|||+++|+||||||+|||+++++ .+||+|||++
T Consensus 69 ~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~--~~kl~dfg~~ 145 (262)
T cd05058 69 EGSPLVVLPYMKHGDLRNFIRSET-HNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESF--TVKVADFGLA 145 (262)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCC--cEEECCcccc
Confidence 5578999999986 9999997432 2345667788999999999999999999999999999999988 7999999999
Q ss_pred CccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcc
Q 000399 326 GFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAG 392 (1566)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~ag 392 (1566)
+......... .. ......++..|+|||.+.+..++...|+|+.|++ .+..++|
T Consensus 146 ~~~~~~~~~~----~~---~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~-------l~el~~~ 198 (262)
T cd05058 146 RDIYDKEYYS----VH---NHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVL-------LWELMTR 198 (262)
T ss_pred ccccCCccee----ec---ccccCcCCccccChhHhccCccchHHHHHHHHHH-------HHHHHcC
Confidence 8543210000 00 0112335678999999988888999999999987 6666664
No 397
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.83 E-value=3.3e-22 Score=235.71 Aligned_cols=194 Identities=16% Similarity=0.148 Sum_probs=157.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
-|+....||+|+||.||+|.+. .++..+|+|.+..... .....+. +|+.+++.++||||+++++
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~------~~~~~v~iK~~~~~~~--~~~~~~~--------~e~~~l~~l~hp~i~~~~~ 85 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREK------HSGRQVAVKMMDLRKQ--QRRELLF--------NEVVIMRDYQHQNVVEMYK 85 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEc------CCCCEEEEEEEEeccc--chHHHHH--------HHHHHHHhCCCCchhhhhh
Confidence 4556668999999999988753 4678899999865322 1222233 5899999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+..++..|+||||+++ +|.+++. ...+++..++.++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 86 ~~~~~~~~~iv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~--~~kL~d 160 (297)
T cd06659 86 SYLVGEELWVLMEFLQGGALTDIVS---QTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDG--RVKLSD 160 (297)
T ss_pred heeeCCeEEEEEecCCCCCHHHHHh---hcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCC--cEEEee
Confidence 99999999999999997 8888775 23478888999999999999999999999999999999999998 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++...... . ......++..|+|||++.+..++...|+|+.|++ .+..+.|+.+
T Consensus 161 fg~~~~~~~~~-----~------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i-------l~el~~g~~p 216 (297)
T cd06659 161 FGFCAQISKDV-----P------KRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIM-------VIEMVDGEPP 216 (297)
T ss_pred chhHhhccccc-----c------cccceecCccccCHHHHccCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 99987433110 0 0112347889999999988888999999999987 6667777653
No 398
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.83 E-value=6.5e-22 Score=232.74 Aligned_cols=196 Identities=13% Similarity=0.101 Sum_probs=160.0
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++.+.||+|+||.||++.+. .++..+|+|.+..... .....+. +|+.+++.++||||+++
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~iK~~~~~~~--~~~~~~~--------~e~~~l~~l~hp~i~~~ 81 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDV------ATGQEVAIKQMNLQQQ--PKKELII--------NEILVMRENKHPNIVNY 81 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEc------CCCCEEEEEEeccccc--hHHHHHH--------HHHHHHhhcCCCCeeeh
Confidence 468999999999999999988752 4577899999754321 1122333 58899999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+...+..|+|+||+++ +|.+++.. ..++...+..++.|++.||.|||++|++||||||+||+++.++ .+||
T Consensus 82 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~--~~kL 156 (293)
T cd06647 82 LDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDG--SVKL 156 (293)
T ss_pred hheeeeCCcEEEEEecCCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCC--CEEE
Confidence 9999999999999999987 99999873 3467788899999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||++........ ......+++.|++||.+....++..+|+|+.|++ .+..+.|+.+
T Consensus 157 ~dfg~~~~~~~~~~-----------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~l-------l~~ll~g~~p 214 (293)
T cd06647 157 TDFGFCAQITPEQS-----------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIM-------AIEMVEGEPP 214 (293)
T ss_pred ccCcceeccccccc-----------ccccccCChhhcCchhhccCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 99999875432110 1122347888999999988888889999999987 6677778764
No 399
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.83 E-value=5.7e-21 Score=205.48 Aligned_cols=204 Identities=20% Similarity=0.281 Sum_probs=170.7
Q ss_pred cccccCccCCCCceEe--eeeehhhhhccCcceeeeecC-cceEEEeeccCCCcccceeeEEeccccccccccccccccc
Q 000399 1301 LGRVGGLKDESPWKIK--ASILSSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVN 1377 (1566)
Q Consensus 1301 LaSgS~D~~I~vWdl~--~~~l~tl~gH~~~V~slafsp-d~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~ 1377 (1566)
+++++.||++++||.. .+.++.++.|...|.++.|++ +...++++|. |+|||+|+..-.+.++++.||.+-|+
T Consensus 76 ~~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSW----D~TiKLW~~~r~~Sv~Tf~gh~~~Iy 151 (311)
T KOG0277|consen 76 VIAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSW----DGTIKLWDPNRPNSVQTFNGHNSCIY 151 (311)
T ss_pred EEEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeecc----CCceEeecCCCCcceEeecCCccEEE
Confidence 8889999999999965 348999999999999999998 6677888888 99999999999999999999999999
Q ss_pred ceEEeecCCce-e--eccCcEEEeecCC-CcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccc
Q 000399 1378 DICVLSSSGRI-A--SCDGTLHVWNSQT-GKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDG 1453 (1566)
Q Consensus 1378 sVafsp~g~~L-a--SgDgtIkLWDl~t-g~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp 1453 (1566)
..+|+|...-+ + |+|+++++||++. |+.+. +..| ...|+++.|+.
T Consensus 152 ~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~-i~ah------------------------------~~Eil~cdw~k 200 (311)
T KOG0277|consen 152 QAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMS-IEAH------------------------------NSEILCCDWSK 200 (311)
T ss_pred EEecCCCCCCeEEEccCCceEEEEEecCCCceeE-EEec------------------------------cceeEeecccc
Confidence 99999987654 4 5599999999985 44443 5443 45677888876
Q ss_pred hhHHHhhhhhccceEEEEecCceEEEEEccCC-ceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccC
Q 000399 1454 NLYTCLHHIECVERLVVGIGNGSLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLS 1532 (1566)
Q Consensus 1454 ~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg-~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~ 1532 (1566)
- +.+.++||+.|+.||.||+++- +++.++.+| .-.|+.|+++|... ..|||+|.
T Consensus 201 y---------~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh------~~AVRkvk~Sph~~----------~lLaSasY 255 (311)
T KOG0277|consen 201 Y---------NHNVLATGGVDNLVRGWDIRNLRTPLFELNGH------GLAVRKVKFSPHHA----------SLLASASY 255 (311)
T ss_pred c---------CCcEEEecCCCceEEEEehhhccccceeecCC------ceEEEEEecCcchh----------hHhhhccc
Confidence 5 4679999999999999999975 567777665 55678888887653 58999999
Q ss_pred CCceeEEeeccC-ceeEEeeccCceeeEeeeec
Q 000399 1533 SGQCRLFDVRSG-NVIASWRAHDGYVTKVRIIS 1564 (1566)
Q Consensus 1533 Dg~I~lWD~~sg-k~l~~l~gH~~~V~~Vafsp 1564 (1566)
|-++||||...+ ..+.+..-|+..|..+.||+
T Consensus 256 DmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~ 288 (311)
T KOG0277|consen 256 DMTVRIWDPERQDSAIETVDHHTEFVCGLDWSL 288 (311)
T ss_pred cceEEecccccchhhhhhhhccceEEecccccc
Confidence 999999998854 46777888999999999986
No 400
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.83 E-value=7e-22 Score=237.80 Aligned_cols=196 Identities=21% Similarity=0.315 Sum_probs=155.4
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
....+|.+.+.||+|+||.||+|++. .++..+|+|.+.+..........+. +|+.+++.++||||+
T Consensus 12 ~~~~~y~~~~~ig~g~~g~v~~~~~~------~~~~~vaiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~niv 77 (342)
T cd07879 12 ELPERYTSLKQVGSGAYGSVCSAIDK------RTGEKVAIKKLSRPFQSEIFAKRAY--------RELTLLKHMQHENVI 77 (342)
T ss_pred ccccceEEEEEeeecCCeEEEEEEeC------CCCcEEEEEEecCccccccchhHHH--------HHHHHHHhcCCCCcc
Confidence 34568999999999999999998752 4688999999875422222112222 699999999999999
Q ss_pred cccccccccC------ceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCcccccc
Q 000399 239 PVLGLLKTSG------LITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS 312 (1566)
Q Consensus 239 ~l~~~~~~~~------~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~ 312 (1566)
++++++.... .+|+||||+..+|..++. ..+++..++.++.|++.||.|||++||+||||||+||+++.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~ 153 (342)
T cd07879 78 GLLDVFTSAVSGDEFQDFYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNED 153 (342)
T ss_pred chhheecccccCCCCceEEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCC
Confidence 9999987543 469999999888777653 246888899999999999999999999999999999999999
Q ss_pred chhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhc
Q 000399 313 CWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1566)
Q Consensus 313 ~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~a 391 (1566)
+ .+||+|||+++..... .....++..|+|||++.+ ..++...|+|+.|++ .+..+.
T Consensus 154 ~--~~kL~dfg~~~~~~~~--------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvi-------l~el~~ 210 (342)
T cd07879 154 C--ELKILDFGLARHADAE--------------MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCI-------MAEMLT 210 (342)
T ss_pred C--CEEEeeCCCCcCCCCC--------------CCCceeeecccChhhhcCccccCchHHHHHHHHH-------HHHHHh
Confidence 8 7999999998853310 012236788999998865 457889999999987 666777
Q ss_pred cccc
Q 000399 392 GRRW 395 (1566)
Q Consensus 392 grs~ 395 (1566)
|+.+
T Consensus 211 g~~p 214 (342)
T cd07879 211 GKTL 214 (342)
T ss_pred CCCC
Confidence 7653
No 401
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.83 E-value=4e-21 Score=205.70 Aligned_cols=236 Identities=19% Similarity=0.270 Sum_probs=194.6
Q ss_pred ccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccc
Q 000399 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGT 1354 (1566)
Q Consensus 1278 ~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~t 1354 (1566)
++..|.+.||+ +..+..+ .|+++.|-+.++||.-++ .+.++. |..-|.+++|+.|..+|+||+. ++.
T Consensus 54 tfeghkgavw~~~l~~na~~-----aasaaadftakvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~----ekl 123 (334)
T KOG0278|consen 54 TFEGHKGAVWSATLNKNATR-----AASAAADFTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQ----EKL 123 (334)
T ss_pred eeeccCcceeeeecCchhhh-----hhhhcccchhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccch----HHH
Confidence 35669999998 6777777 899999999999997766 777776 9999999999999999999998 999
Q ss_pred eeeEEeccc-ccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeeccccc---------ccccCCC
Q 000399 1355 VQKWELTRI-NCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMD---------SLHGGSP 1422 (1566)
Q Consensus 1355 VrlWDl~tg-~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~---------~~~~~~~ 1422 (1566)
+||+|++.- .+...+.||++.|..+-|....+.++|. |++||+||.+||..++++...+.. -+.+...
T Consensus 124 lrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~ilTia~ 203 (334)
T KOG0278|consen 124 LRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRILTIAY 203 (334)
T ss_pred hhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecCCCCcceeeccCCCEEEEec
Confidence 999999765 3557789999999999999999988774 999999999999999887643322 2233334
Q ss_pred CCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeee-ccCCcccCch
Q 000399 1423 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLW-RGEPTELGFP 1501 (1566)
Q Consensus 1423 ~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~-~~h~~~v~~~ 1501 (1566)
...+..|+......+........|.+.+.+|+ ...+++|+.|..++.+|..+|..+-.+ ++| .
T Consensus 204 gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~----------k~~fVaGged~~~~kfDy~TgeEi~~~nkgh------~ 267 (334)
T KOG0278|consen 204 GSSVKFWDAKSFGLLKSYKMPCNVESASLHPK----------KEFFVAGGEDFKVYKFDYNTGEEIGSYNKGH------F 267 (334)
T ss_pred CceeEEeccccccceeeccCccccccccccCC----------CceEEecCcceEEEEEeccCCceeeecccCC------C
Confidence 45566777777777777777778888888887 679999999999999999999998876 544 5
Q ss_pred hhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEe
Q 000399 1502 SLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW 1550 (1566)
Q Consensus 1502 ~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l 1550 (1566)
++|-||.|+ |||...|+||.||+|++|-+..++....|
T Consensus 268 gpVhcVrFS-----------PdGE~yAsGSEDGTirlWQt~~~~~~~~~ 305 (334)
T KOG0278|consen 268 GPVHCVRFS-----------PDGELYASGSEDGTIRLWQTTPGKTYGLW 305 (334)
T ss_pred CceEEEEEC-----------CCCceeeccCCCceEEEEEecCCCchhhc
Confidence 667777665 66788999999999999999887765433
No 402
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.83 E-value=5e-22 Score=231.29 Aligned_cols=196 Identities=16% Similarity=0.162 Sum_probs=160.1
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
..|+.++.||.|+||.||+|.+. .++..+|+|.+..... ......+. +|+.+++.++||||++++
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~------~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~l~~l~h~~i~~~~ 68 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDN------RTQQVVAIKIIDLEEA-EDEIEDIQ--------QEITVLSQCDSPYVTKYY 68 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEc------cCCEEEEEEEEecccc-HHHHHHHH--------HHHHHHHhCCCCCEeeEE
Confidence 46889999999999999998753 4678899999875422 22223344 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+.+.++...|+||||+++ +|.+++.. ..+++..+..++.|++.||.|||+++++|+||+|+||+++.++ .++|+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~--~~~l~ 143 (277)
T cd06640 69 GSYLKGTKLWIIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQG--DVKLA 143 (277)
T ss_pred EEEEECCEEEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCC--CEEEc
Confidence 999999999999999987 99998873 3478888899999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||++........ ......++..|+|||++.+..++...|.|+.|++ .+..+.|..+
T Consensus 144 dfg~~~~~~~~~~-----------~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~i-------l~el~tg~~p 200 (277)
T cd06640 144 DFGVAGQLTDTQI-----------KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGIT-------AIELAKGEPP 200 (277)
T ss_pred ccccceeccCCcc-----------ccccccCcccccCHhHhccCCCccHHHHHHHHHH-------HHHHHHCCCC
Confidence 9999975432100 0112247788999999988888889999999988 5666777654
No 403
>PTZ00420 coronin; Provisional
Probab=99.83 E-value=1.5e-20 Score=235.07 Aligned_cols=228 Identities=10% Similarity=0.140 Sum_probs=169.8
Q ss_pred ccccCCCceec--cCCC-CCCCCCcccccccCccCCCCceEeee---------eehhhhhccCcceeeeecCcceE-EEe
Q 000399 1278 NLMKCEPWFWF--PTPA-ASWDGPDFLGRVGGLKDESPWKIKAS---------ILSSIRAHHGALRSVAVGQDECT-VFT 1344 (1566)
Q Consensus 1278 ~~~~H~~~V~~--fSpd-g~~~~~~~LaSgS~D~~I~vWdl~~~---------~l~tl~gH~~~V~slafspd~~~-LaS 1344 (1566)
....|.+.|++ |+|+ +.+ |+|||.|++|++||+.++ .+..+.+|.+.|.+++|+|++.. ++|
T Consensus 69 ~L~gH~~~V~~lafsP~~~~l-----LASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaS 143 (568)
T PTZ00420 69 KLKGHTSSILDLQFNPCFSEI-----LASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCS 143 (568)
T ss_pred EEcCCCCCEEEEEEcCCCCCE-----EEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEE
Confidence 34569999988 8986 666 999999999999998743 23457899999999999998865 578
Q ss_pred eccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCC
Q 000399 1345 AGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSP 1422 (1566)
Q Consensus 1345 gS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~ 1422 (1566)
||. |++|+|||+.+++.+..+. |...|.+++|+++|..++++ |++|+|||+++++.+.++.+|.....
T Consensus 144 gS~----DgtIrIWDl~tg~~~~~i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~----- 213 (568)
T PTZ00420 144 SGF----DSFVNIWDIENEKRAFQIN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKN----- 213 (568)
T ss_pred EeC----CCeEEEEECCCCcEEEEEe-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCce-----
Confidence 887 9999999999998777775 66789999999999998754 99999999999999988877643100
Q ss_pred CCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCc----eEEEEEccC-CceeeeeccCCcc
Q 000399 1423 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG----SLRFIDINQ-GQKLHLWRGEPTE 1497 (1566)
Q Consensus 1423 ~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~Dg----tIrlWDi~t-g~~l~~~~~h~~~ 1497 (1566)
...+....|++ ++.++++++.|+ +|+|||+++ ++++..+..+..
T Consensus 214 --------------------s~~v~~~~fs~----------d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~- 262 (568)
T PTZ00420 214 --------------------TKNIWIDGLGG----------DDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNA- 262 (568)
T ss_pred --------------------eEEEEeeeEcC----------CCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCC-
Confidence 00111223334 477888888774 799999995 566666543321
Q ss_pred cCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCce--eEEeeccCceeeEeeeeccC
Q 000399 1498 LGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNV--IASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1498 v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~--l~~l~gH~~~V~~VafspdG 1566 (1566)
.+ .+.. ....++|.++++|+.|+.|++|++.++.. +..+. +..++.+++|.|++
T Consensus 263 ---~~---~L~p--------~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l~~~~-s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 263 ---SA---PLIP--------HYDESTGLIYLIGKGDGNCRYYQHSLGSIRKVNEYK-SCSPFRSFGFLPKQ 318 (568)
T ss_pred ---cc---ceEE--------eeeCCCCCEEEEEECCCeEEEEEccCCcEEeecccc-cCCCccceEEcccc
Confidence 11 1100 01124577899999999999999988753 23334 67789999999974
No 404
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.83 E-value=8.5e-22 Score=225.38 Aligned_cols=192 Identities=20% Similarity=0.161 Sum_probs=152.5
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
+++.+.||+|+||.||+|.+.... ...+..+|+|.+..... ......+. +|+.+++.++||||++++++
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~--~~~~~~vaiK~~~~~~~-~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~ 69 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLS--GEKEVEVAVKTLKEDAD-EQQIEEFL--------REARIMRKLDHPNIVKLLGV 69 (258)
T ss_pred CcccceeccCCCcceEEEEecCCC--CCCCceEEEEEccCCCC-hHHHHHHH--------HHHHHHHhcCCCchheEEEE
Confidence 457789999999999998863210 12358899999865422 11223333 58999999999999999999
Q ss_pred ccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 244 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
+.+.+..|++|||+++ +|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++.++ .++|+||
T Consensus 70 ~~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~--~~~l~df 147 (258)
T smart00219 70 CTEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENL--VVKISDF 147 (258)
T ss_pred EcCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCC--eEEEccc
Confidence 9999999999999987 999999743332278889999999999999999999999999999999999998 7999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|+++.......... ..-.++..|+|||.+.+..++...|+|+.|++
T Consensus 148 g~~~~~~~~~~~~~----------~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i 193 (258)
T smart00219 148 GLSRDLYDDDYYKK----------KGGKLPIRWMAPESLKDGKFTSKSDVWSFGVL 193 (258)
T ss_pred CCceeccccccccc----------ccCCCcccccChHHhccCCCCcchhHHHHHHH
Confidence 99986543211100 01125678999999988888899999999987
No 405
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.83 E-value=4.4e-21 Score=227.55 Aligned_cols=218 Identities=20% Similarity=0.293 Sum_probs=182.2
Q ss_pred CCCCCCCCCcccccccCccCCCCceEee--e-----eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecc
Q 000399 1290 TPAASWDGPDFLGRVGGLKDESPWKIKA--S-----ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR 1362 (1566)
Q Consensus 1290 Spdg~~~~~~~LaSgS~D~~I~vWdl~~--~-----~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~t 1362 (1566)
.|++++ |.|||.|+.|++|++.. + .+.++..|...|++++...+++.|+|+|. |-||++|+...
T Consensus 34 a~~~ry-----LfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~Ss----DtTVK~W~~~~ 104 (735)
T KOG0308|consen 34 APNGRY-----LFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASS----DTTVKVWNAHK 104 (735)
T ss_pred CCCCce-----EEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecC----CceEEEeeccc
Confidence 345666 99999999999999864 2 47889999999999999999999999998 99999999987
Q ss_pred c--ccccccccccccccceEE-eecCCceeec--cCcEEEeecCCCc--EEEEeecccccccccCCCCCcccccccCCCC
Q 000399 1363 I--NCVSGYYGHEEVVNDICV-LSSSGRIASC--DGTLHVWNSQTGK--LLSVFAEQSMDSLHGGSPSSSISKINTDQVG 1435 (1566)
Q Consensus 1363 g--~~i~tl~gH~~~V~sVaf-sp~g~~LaSg--DgtIkLWDl~tg~--~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~ 1435 (1566)
+ -|..++..|.+.|.|+++ .++...+||| |+.|.|||+.+|. .+..+..-..
T Consensus 105 ~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~--------------------- 163 (735)
T KOG0308|consen 105 DNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFNNVTV--------------------- 163 (735)
T ss_pred CcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhcccccc---------------------
Confidence 7 689999999999999998 6666677888 9999999999883 4443332110
Q ss_pred CCCCc-ccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCc
Q 000399 1436 MLNSN-TLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEK 1514 (1566)
Q Consensus 1436 ~~~~~-~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~ 1514 (1566)
-.+. ++..+|.+++-+++ |..+++|+..+-||+||.++++.+..++|| +..|+.+..+
T Consensus 164 -~sl~sG~k~siYSLA~N~t----------~t~ivsGgtek~lr~wDprt~~kimkLrGH------TdNVr~ll~~---- 222 (735)
T KOG0308|consen 164 -NSLGSGPKDSIYSLAMNQT----------GTIIVSGGTEKDLRLWDPRTCKKIMKLRGH------TDNVRVLLVN---- 222 (735)
T ss_pred -ccCCCCCccceeeeecCCc----------ceEEEecCcccceEEeccccccceeeeecc------ccceEEEEEc----
Confidence 0011 45567778877776 889999999999999999999999999987 4455666654
Q ss_pred ccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeecc
Q 000399 1515 MQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1515 ~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafspd 1565 (1566)
.||..++|||+||+|++||+...+++.++..|+..|.++.-+|+
T Consensus 223 -------dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~s 266 (735)
T KOG0308|consen 223 -------DDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPS 266 (735)
T ss_pred -------CCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCC
Confidence 66789999999999999999999999999999999999988764
No 406
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.83 E-value=1.6e-20 Score=218.37 Aligned_cols=269 Identities=16% Similarity=0.166 Sum_probs=190.1
Q ss_pred ccCCCceec--cCCCCCCCCCcccccccCccCCCCceEe-eeeehhhhhccCcceeeeecCcceEEEeeccCCCccccee
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQ 1356 (1566)
Q Consensus 1280 ~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~-~~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVr 1356 (1566)
..|+-.|.+ |-|.-.+ -++|||+|++|.+|.-. -..-.+++.|..-|+|+.|+|||..|+|+|. ||+|.
T Consensus 144 ~GhSr~ins~~~KpsRPf----Ri~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gs----Dgki~ 215 (603)
T KOG0318|consen 144 TGHSRRINSVDFKPSRPF----RIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGS----DGKIY 215 (603)
T ss_pred eccceeEeeeeccCCCce----EEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecC----CccEE
Confidence 347777776 5554432 19999999999988743 2356788899999999999999999999998 99999
Q ss_pred eEEecccccccccc---cccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccc---c---------cccc
Q 000399 1357 KWELTRINCVSGYY---GHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSM---D---------SLHG 1419 (1566)
Q Consensus 1357 lWDl~tg~~i~tl~---gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~---~---------~~~~ 1419 (1566)
+||-.+|+.+..+. +|++.|++|+|+|++.+++++ |.++||||+.++++++++..... + .+.+
T Consensus 216 iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lIt 295 (603)
T KOG0318|consen 216 IYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLIT 295 (603)
T ss_pred EEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEE
Confidence 99999999999887 899999999999999998654 99999999999999998864322 0 1111
Q ss_pred CCCCCcccccccCCCC-CCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeee-ccCCcc
Q 000399 1420 GSPSSSISKINTDQVG-MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLW-RGEPTE 1497 (1566)
Q Consensus 1420 ~~~~~~~~~~~~~~~~-~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~-~~h~~~ 1497 (1566)
.+-++.+..++.+... ...+.+|...|++++.+| |++++++|+.||.|.-||..+|..-+.. ++|.+.
T Consensus 296 VSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~----------d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nq 365 (603)
T KOG0318|consen 296 VSLSGTINYLNPSDPSVLKVISGHNKSITALTVSP----------DGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQ 365 (603)
T ss_pred EEcCcEEEEecccCCChhheecccccceeEEEEcC----------CCCEEEeeccCceEEEEecCCccccccccccccce
Confidence 1112222222222222 222345666666666555 4899999999999999999887433211 111110
Q ss_pred c------------------------------------CchhhHHHhhccCCC---------------------------c
Q 000399 1498 L------------------------------------GFPSLVSAICACGSE---------------------------K 1514 (1566)
Q Consensus 1498 v------------------------------------~~~~~V~sv~~s~~~---------------------------~ 1514 (1566)
+ .......+++..+++ .
T Consensus 366 I~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~ 445 (603)
T KOG0318|consen 366 IKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYE 445 (603)
T ss_pred EEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccc
Confidence 0 000011122222221 1
Q ss_pred ccCCCcccchhHHHhccCCCceeEEeeccCce--eEEeeccCceeeEeeeeccC
Q 000399 1515 MQAGGAVASPSWIAAGLSSGQCRLFDVRSGNV--IASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1515 ~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~--l~~l~gH~~~V~~VafspdG 1566 (1566)
..+.+.+|++..+|.|+.||.|++|.+..+.. ......|.++|++|+|||||
T Consensus 446 ~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~ 499 (603)
T KOG0318|consen 446 SSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDG 499 (603)
T ss_pred cceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCC
Confidence 12244789999999999999999999986553 33466799999999999997
No 407
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.83 E-value=7.5e-22 Score=234.85 Aligned_cols=195 Identities=14% Similarity=0.155 Sum_probs=157.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
...|...+.||+|+||.||++++. .++..+|+|.+....... ....++. +|+.+++.++||||++
T Consensus 24 ~~~f~~~~~lg~G~~~~v~~~~~~------~~~~~valK~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~iv~ 89 (317)
T cd06635 24 EKLFTDLREIGHGSFGAVYFARDV------RTNEVVAIKKMSYSGKQSNEKWQDII--------KEVKFLQRIKHPNSIE 89 (317)
T ss_pred hhhhhhhheeccCCCeEEEEEEEc------CCCcEEEEEEEecCCCCchHHHHHHH--------HHHHHHHhCCCCCEEE
Confidence 345889999999999999988752 467899999987542222 1222333 5999999999999999
Q ss_pred ccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
+++++..+...|+||||++++|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||
T Consensus 90 ~~~~~~~~~~~~lv~e~~~g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~--~~kl 166 (317)
T cd06635 90 YKGCYLREHTAWLVMEYCLGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG--QVKL 166 (317)
T ss_pred EEEEEeeCCeEEEEEeCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCC--CEEE
Confidence 99999999999999999999888887632 34578888899999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc---ccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+|||++...... ....++..|+|||++. ...++..+|+|+.|++ .+..+.|+.
T Consensus 167 ~dfg~~~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvi-------l~el~~g~~ 222 (317)
T cd06635 167 ADFGSASIASPA---------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT-------CIELAERKP 222 (317)
T ss_pred ecCCCccccCCc---------------ccccCCccccChhhhhcCCCCCCCccccHHHHHHH-------HHHHHhCCC
Confidence 999998743310 1123778899999874 4457789999999988 666777775
No 408
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.83 E-value=4.4e-22 Score=230.57 Aligned_cols=191 Identities=17% Similarity=0.171 Sum_probs=148.6
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
.+|.+.+.||+|+||.||+|.+.- .......+|+|...... .....+.+. +|+.+++.++||||++++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~---~~~~~~~v~ik~~~~~~-~~~~~~~~~--------~e~~~l~~~~h~~i~~~~ 73 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMS---PENEKIAVAVKTCKNCT-SPSVREKFL--------QEAYIMRQFDHPHIVKLI 73 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEec---CCCCCcceEEEecCCcC-CHHHHHHHH--------HHHHHHHhCCCCchhcee
Confidence 468899999999999999887421 11234568888875432 122223344 599999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++.+ +..|+||||+++ +|.+++... ...++...++.++.|++.||.|||++|++||||||+||+++.++ .+||+
T Consensus 74 ~~~~~-~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~--~~~l~ 149 (270)
T cd05056 74 GVITE-NPVWIVMELAPLGELRSYLQVN-KYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPD--CVKLG 149 (270)
T ss_pred EEEcC-CCcEEEEEcCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCC--CeEEc
Confidence 98875 557899999986 999999743 23478888999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|||+++......... .....++..|+|||.+....++...|+|+.|++
T Consensus 150 d~g~~~~~~~~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 197 (270)
T cd05056 150 DFGLSRYLEDESYYK----------ASKGKLPIKWMAPESINFRRFTSASDVWMFGVC 197 (270)
T ss_pred cCceeeeccccccee----------cCCCCccccccChhhhccCCCCchhhhHHHHHH
Confidence 999998654211000 001123457999999988888999999999987
No 409
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.83 E-value=7.9e-22 Score=220.11 Aligned_cols=185 Identities=19% Similarity=0.268 Sum_probs=151.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
..+|.-++.+|.|+- .|--|-+. -.+..||+|.+..........+ ++.||..+|..++|+||+++
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~------v~~~~v~ikk~~~pf~n~~~ak--------ra~rel~l~~~v~~~nii~l 80 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQ------VLGRPVAIKKLSRPFQNQTHAK--------RAYRELKLMKCVNHKNIISL 80 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchh------hccCceehhhhcCccccCccch--------hhhhhhhhhhhhcccceeee
Confidence 457888889998888 44444442 3578899998776533222222 55689999999999999999
Q ss_pred ccccccc------CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch
Q 000399 241 LGLLKTS------GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1566)
Q Consensus 241 ~~~~~~~------~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~ 314 (1566)
+.+|.-. ..+|+|||+|..+|...+. ..+.-..++++++|++.|++|||+.||+||||||+||++..++
T Consensus 81 ~n~ftP~~~l~~~~e~y~v~e~m~~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~- 155 (369)
T KOG0665|consen 81 LNVFTPQKTLEEFQEVYLVMELMDANLCQVIL----MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDC- 155 (369)
T ss_pred eeccCccccHHHHHhHHHHHHhhhhHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchh-
Confidence 9999654 3799999999999999887 2256677899999999999999999999999999999999999
Q ss_pred hhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 315 ~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
.+||.|||+|+..... ...+..+.|.+|+|||++.+..|.+.+|+|+.|||
T Consensus 156 -~lKi~dfg~ar~e~~~------------~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci 206 (369)
T KOG0665|consen 156 -TLKILDFGLARTEDTD------------FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI 206 (369)
T ss_pred -heeeccchhhcccCcc------------cccCchhheeeccCchheeccCCcccchhhhhhhH
Confidence 7999999999854420 12345568899999999999999999999999999
No 410
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.83 E-value=4.3e-22 Score=238.11 Aligned_cols=200 Identities=15% Similarity=0.137 Sum_probs=150.7
Q ss_pred eeeeec--chhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccc
Q 000399 168 AFIGIC--SYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLK 245 (1566)
Q Consensus 168 ~~IG~G--~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~ 245 (1566)
..||+| +||+||++++. .++..||+|++.......... +.+. +|+.+++.++||||++++++|.
T Consensus 4 ~~ig~g~~~~~~v~~a~~~------~~~~~vaiK~~~~~~~~~~~~-~~~~-------~e~~~~~~l~h~niv~~~~~~~ 69 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHT------PTGTLVTVRITDLENCTEEHL-KALQ-------NEVVLSHFFRHPNIMTSWTVFT 69 (328)
T ss_pred HHhCCcccCceeEEEEEEc------CCCcEEEEEEeccccCCHHHH-HHHH-------HHHHHHHhCCCCCcceEeeeEe
Confidence 456766 89999998863 578999999987543332222 2232 6888899999999999999999
Q ss_pred ccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCC
Q 000399 246 TSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPL 324 (1566)
Q Consensus 246 ~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGl 324 (1566)
.++..|+||||+.+ +|.+++.......+++..++.++.|++.||+|||++||+||||||+|||++.++ .+|++|||.
T Consensus 70 ~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~--~~~~~~~~~ 147 (328)
T cd08226 70 TGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDG--LVSLSGLSH 147 (328)
T ss_pred cCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCC--cEEEechHH
Confidence 99999999999997 999998754344578888999999999999999999999999999999999888 799999986
Q ss_pred CCccccccccCCCCCCceeeeecCCcccccccccccccc--cchhhccccccccccCCchhhhHHHhhcccc
Q 000399 325 VGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS--MDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 325 A~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~--~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+.......... ...........++..|+|||++.+ ..++..+|+|+.|++ .+..++|+.
T Consensus 148 ~~~~~~~~~~~----~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~-------l~el~~g~~ 208 (328)
T cd08226 148 LYSLVRNGQKA----KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGIT-------ACELATGRV 208 (328)
T ss_pred HhhhhccCccc----cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHH-------HHHHHhCCC
Confidence 54322100000 000000011224566999999876 347789999999987 566667764
No 411
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.83 E-value=9.8e-22 Score=228.63 Aligned_cols=205 Identities=16% Similarity=0.095 Sum_probs=159.4
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+.|++.+.||+|+||.||+|.... ....++..+|+|.+...... ....++. +|+.+++.++||||++++
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~--~~~~~~~~~avK~~~~~~~~-~~~~~~~--------~ei~~l~~l~~~~i~~~~ 72 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDP--LGDNTGEQVAVKSLNHSGEE-QHRSDFE--------REIEILRTLDHENIVKYK 72 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecC--CCCCCceEEEEEEeccccch-HHHHHHH--------HHHHHHHhCCCCChheEE
Confidence 468899999999999999987421 11245788999998764332 1233344 589999999999999999
Q ss_pred ccccc--cCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 242 GLLKT--SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 242 ~~~~~--~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++.. ....++||||+++ +|.+++...+ ..++...+..++.|++.||.|||++||+||||||+||+++.++ .+|
T Consensus 73 ~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~--~~~ 149 (284)
T cd05038 73 GVCEKPGGRSLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESED--LVK 149 (284)
T ss_pred eeeecCCCCceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCC--CEE
Confidence 99877 5589999999986 9999997432 2478888899999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||+++.......... ......++..|++||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 150 l~dfg~~~~~~~~~~~~~--------~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~-------l~el~tg~~p 211 (284)
T cd05038 150 ISDFGLAKVLPEDKDYYY--------VKEPGESPIFWYAPECLRTSKFSSASDVWSFGVT-------LYELFTYGDP 211 (284)
T ss_pred EcccccccccccCCccee--------ccCCCCCcccccCcHHHccCCCCcccchHHHhhh-------hheeeccCCC
Confidence 999999986542111000 0001124456999999988888889999999988 6667777643
No 412
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=3.9e-21 Score=230.07 Aligned_cols=207 Identities=16% Similarity=0.241 Sum_probs=184.1
Q ss_pred cccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEeccccccccccccccccc
Q 000399 1299 DFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVN 1377 (1566)
Q Consensus 1299 ~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~ 1377 (1566)
+++++||.|-.+.+|.+... .+..+.+|+.+|.+|.|++++.++++|+. ||+||+||+..++.++++.||...+.
T Consensus 41 r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~~E~Llaagsa----sgtiK~wDleeAk~vrtLtgh~~~~~ 116 (825)
T KOG0267|consen 41 RSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDTSERLLAAGSA----SGTIKVWDLEEAKIVRTLTGHLLNIT 116 (825)
T ss_pred eeeccCCCceeeccccccCCchhheeeccCCcceeeecCcchhhhccccc----CCceeeeehhhhhhhhhhhccccCcc
Confidence 45999999999999998653 66779999999999999999999999999 99999999999999999999999999
Q ss_pred ceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchh
Q 000399 1378 DICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNL 1455 (1566)
Q Consensus 1378 sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~ 1455 (1566)
+|.|+|-+.+.++| |+.+++||.+...|...+.+| ...|..+.|+|+
T Consensus 117 sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~------------------------------~~vv~~l~lsP~- 165 (825)
T KOG0267|consen 117 SVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSH------------------------------TRVVDVLRLSPD- 165 (825)
T ss_pred eeeeccceEEeccccccccceehhhhccCceeeecCC------------------------------cceeEEEeecCC-
Confidence 99999999999887 999999999988898887764 445677788876
Q ss_pred HHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCc
Q 000399 1456 YTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQ 1535 (1566)
Q Consensus 1456 ~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~ 1535 (1566)
|+++++|+.|.++++||...|+...+|+.|. +.|.++.++| ..-++++||.|++
T Consensus 166 ---------Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e------~~v~sle~hp-----------~e~Lla~Gs~d~t 219 (825)
T KOG0267|consen 166 ---------GRWVASGGEDNTVKIWDLTAGKLSKEFKSHE------GKVQSLEFHP-----------LEVLLAPGSSDRT 219 (825)
T ss_pred ---------CceeeccCCcceeeeeccccccccccccccc------ccccccccCc-----------hhhhhccCCCCce
Confidence 9999999999999999999999999999773 4445555554 4458999999999
Q ss_pred eeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1536 CRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1536 I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
+++||+++-+.+...+.-...|.+++|+|+|
T Consensus 220 v~f~dletfe~I~s~~~~~~~v~~~~fn~~~ 250 (825)
T KOG0267|consen 220 VRFWDLETFEVISSGKPETDGVRSLAFNPDG 250 (825)
T ss_pred eeeeccceeEEeeccCCccCCceeeeecCCc
Confidence 9999999999999988888899999999986
No 413
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.83 E-value=7.4e-21 Score=202.35 Aligned_cols=185 Identities=25% Similarity=0.384 Sum_probs=160.4
Q ss_pred eeeehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCc
Q 000399 1317 ASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGT 1394 (1566)
Q Consensus 1317 ~~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--Dgt 1394 (1566)
+..+..+..|.++|+++.|+-||++.+|++. |+|||+|+...|.++++|.||...|.+++.+.+...++|| |..
T Consensus 7 tkr~~~l~~~qgaV~avryN~dGnY~ltcGs----drtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~ 82 (307)
T KOG0316|consen 7 TKRLSILDCAQGAVRAVRYNVDGNYCLTCGS----DRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKA 82 (307)
T ss_pred chhceeecccccceEEEEEccCCCEEEEcCC----CceEEeecccccceeeeecCCCceeeeccccccccccccCCCCce
Confidence 3456778899999999999999999999998 9999999999999999999999999999999999999988 999
Q ss_pred EEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecC
Q 000399 1395 LHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGN 1474 (1566)
Q Consensus 1395 IkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~D 1474 (1566)
|.+||+.||+.++.+.+| ...|+.+.|+.+ ...+++||.|
T Consensus 83 v~vwDV~TGkv~Rr~rgH------------------------------~aqVNtV~fNee----------sSVv~SgsfD 122 (307)
T KOG0316|consen 83 VQVWDVNTGKVDRRFRGH------------------------------LAQVNTVRFNEE----------SSVVASGSFD 122 (307)
T ss_pred EEEEEcccCeeeeecccc------------------------------cceeeEEEecCc----------ceEEEecccc
Confidence 999999999999999886 456888888876 7899999999
Q ss_pred ceEEEEEccCC--ceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeec
Q 000399 1475 GSLRFIDINQG--QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1552 (1566)
Q Consensus 1475 gtIrlWDi~tg--~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~g 1552 (1566)
.++|+||.|+. +++..+... ...|.+|.++ +..|++||.||++|.||+|.|+....+-
T Consensus 123 ~s~r~wDCRS~s~ePiQildea------~D~V~Si~v~-------------~heIvaGS~DGtvRtydiR~G~l~sDy~- 182 (307)
T KOG0316|consen 123 SSVRLWDCRSRSFEPIQILDEA------KDGVSSIDVA-------------EHEIVAGSVDGTVRTYDIRKGTLSSDYF- 182 (307)
T ss_pred ceeEEEEcccCCCCccchhhhh------cCceeEEEec-------------ccEEEeeccCCcEEEEEeecceeehhhc-
Confidence 99999999964 566666544 3344555544 2468999999999999999999887775
Q ss_pred cCceeeEeeeeccC
Q 000399 1553 HDGYVTKVRIISKR 1566 (1566)
Q Consensus 1553 H~~~V~~VafspdG 1566 (1566)
..+|++++|++||
T Consensus 183 -g~pit~vs~s~d~ 195 (307)
T KOG0316|consen 183 -GHPITSVSFSKDG 195 (307)
T ss_pred -CCcceeEEecCCC
Confidence 4699999999986
No 414
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.83 E-value=6e-22 Score=228.17 Aligned_cols=189 Identities=18% Similarity=0.233 Sum_probs=154.5
Q ss_pred eeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccccCc
Q 000399 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 249 (1566)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~~ 249 (1566)
||+|+||.||+|++. .++..+|+|++.+.........+.+. +|+.+++.++||||+++++.+.+...
T Consensus 1 lg~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~~-------~e~~~l~~l~h~~i~~~~~~~~~~~~ 67 (262)
T cd05572 1 LGVGGFGRVELVKVK------SKNRTFALKCVKKRHIVETGQQEHIF-------SEKEILEECNHPFIVKLYRTFKDKKY 67 (262)
T ss_pred CCCCCceEEEEEEEC------CCCcEEEEEEEehhcchhhhHHHHHH-------HHHHHHHhCCCCCEeeeeeeEEcCCc
Confidence 699999999998863 46889999998765433222222222 69999999999999999999999999
Q ss_pred eeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCcc
Q 000399 250 ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFN 328 (1566)
Q Consensus 250 l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~ 328 (1566)
+|+||||+++ +|.+++.. ...+++..++.++.||+.||.|||++|++|+||||+||+++.++ .+||+|||+++..
T Consensus 68 ~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~--~~~l~df~~~~~~ 143 (262)
T cd05572 68 IYMLMEYCLGGELWTILRD--RGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNG--YVKLVDFGFAKKL 143 (262)
T ss_pred cEEEEecCCCCcHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCC--CEEEeeCCccccc
Confidence 9999999986 99999973 34578888999999999999999999999999999999999988 7999999999865
Q ss_pred ccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 329 SIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
.... . .....+++.|++||.+.+..++...|.|+.|++ .+..+.|..
T Consensus 144 ~~~~-----~-------~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~i-------l~~l~~g~~ 190 (262)
T cd05572 144 KSGQ-----K-------TWTFCGTPEYVAPEIILNKGYDFSVDYWSLGIL-------LYELLTGRP 190 (262)
T ss_pred Cccc-----c-------cccccCCcCccChhHhcCCCCCChhhhhhhHHH-------HHHHHhCCC
Confidence 4210 0 011237788999999988888889999999987 566666754
No 415
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.83 E-value=9.2e-21 Score=236.12 Aligned_cols=231 Identities=20% Similarity=0.268 Sum_probs=176.9
Q ss_pred ccCCCceec--cCCCCCCCCCcccccccCccCCCCceEe-e-eeehhhhhccCcceeeeecCcceEEEeeccCCCcccce
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK-A-SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1566)
Q Consensus 1280 ~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~-~-~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tV 1355 (1566)
..|..+|.+ |+|+|.+ +++|+.|+++++||+. . ..+++++||+..|++++|+|++++++|||. |++|
T Consensus 200 ~~h~~~v~~~~fs~d~~~-----l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~----D~tv 270 (456)
T KOG0266|consen 200 SGHTRGVSDVAFSPDGSY-----LLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSD----DGTV 270 (456)
T ss_pred cccccceeeeEECCCCcE-----EEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecC----CCcE
Confidence 568899988 8999998 9999999999999994 3 388999999999999999999999999998 9999
Q ss_pred eeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCc--EEEEeeccccc--ccc-----------
Q 000399 1356 QKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGK--LLSVFAEQSMD--SLH----------- 1418 (1566)
Q Consensus 1356 rlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~--~l~~l~~h~~~--~~~----------- 1418 (1566)
+|||+.+++|+.++.+|.+.|++++|++++..++++ |+.|+|||+.++. ++..+..+... ...
T Consensus 271 riWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll 350 (456)
T KOG0266|consen 271 RIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLL 350 (456)
T ss_pred EEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEE
Confidence 999999999999999999999999999999999766 9999999999999 56666654433 111
Q ss_pred cCCCCCcccccccCCCCC-CCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcc
Q 000399 1419 GGSPSSSISKINTDQVGM-LNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTE 1497 (1566)
Q Consensus 1419 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~ 1497 (1566)
.+..+..+.+|+...... ....+|...+ ...|++ ..+++|+.+++|+.|+.|.+||+.++..+..+.+|.
T Consensus 351 ~~~~d~~~~~w~l~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~i~sg~~d~~v~~~~~~s~~~~~~l~~h~-- 421 (456)
T KOG0266|consen 351 SASLDRTLKLWDLRSGKSVGTYTGHSNLV-RCIFSP------TLSTGGKLIYSGSEDGSVYVWDSSSGGILQRLEGHS-- 421 (456)
T ss_pred EecCCCeEEEEEccCCcceeeecccCCcc-eeEecc------cccCCCCeEEEEeCCceEEEEeCCccchhhhhcCCC--
Confidence 122222333343332222 2223343332 111222 235679999999999999999999999998888872
Q ss_pred cCchhhHHHhhccCCCcccCCCcccchhHHHhcc--CCCceeEEeec
Q 000399 1498 LGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL--SSGQCRLFDVR 1542 (1566)
Q Consensus 1498 v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs--~Dg~I~lWD~~ 1542 (1566)
...|..+.++ +...++++++ .|+.+++|...
T Consensus 422 ---~~~~~~~~~~-----------~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 422 ---KAAVSDLSSH-----------PTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred ---CCceeccccC-----------CCcCeeeecCcCCCceEEEecCC
Confidence 2233444444 5556788887 78899999753
No 416
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.83 E-value=8.1e-22 Score=226.10 Aligned_cols=183 Identities=17% Similarity=0.140 Sum_probs=140.6
Q ss_pred eeeeecchhhHHHHHhhhccCC----cchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGC----LEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~----~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
+.||+|+||.||+|.+...... ......+++|.+...... ...+. +|+.+|+.++||||++++++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~--------~e~~~l~~l~h~~i~~~~~~ 69 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFF--------ETASLMSQLSHKHLVKLYGV 69 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHH--------HHHHHHHcCCCcchhheeeE
Confidence 4699999999999886321000 011235677776543211 23343 58899999999999999999
Q ss_pred ccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch-----hhh
Q 000399 244 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-----SWL 317 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~-----~~v 317 (1566)
+.. ...++||||+++ +|.+++...+. .++...+..++.||+.||.|||++||+||||||+|||++.++. ..+
T Consensus 70 ~~~-~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~ 147 (259)
T cd05037 70 CVR-DENIMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFI 147 (259)
T ss_pred Eec-CCcEEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeE
Confidence 988 778999999996 99999974322 5778888999999999999999999999999999999987762 148
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc--chhhcccccccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM--DWHSQFNRWWRGEL 378 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~--~y~~~~d~Ws~G~i 378 (1566)
||+|||+++.... .....++..|+|||++.+. .++...|+|+.|++
T Consensus 148 kl~Dfg~a~~~~~---------------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~ 195 (259)
T cd05037 148 KLSDPGIPITVLS---------------REERVERIPWIAPECIRNGQASLTIAADKWSFGTT 195 (259)
T ss_pred EeCCCCccccccc---------------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHH
Confidence 9999999985432 0012255679999998776 67889999999987
No 417
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.83 E-value=8.3e-22 Score=229.59 Aligned_cols=196 Identities=21% Similarity=0.227 Sum_probs=155.2
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc---cCCCcccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL---RHPNVAPV 240 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l---~HpNIV~l 240 (1566)
|++.+.||+|+||.||+|+++ .++..+|+|.+............+. +|+.+++++ +||||+++
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~------~~~~~~aiK~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~h~~i~~~ 66 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDL------NTGRFVALKKVRVPLSEEGIPLSTL--------REIALLKQLESFEHPNIVRL 66 (287)
T ss_pred CeEEEEecccCceEEEEEEEC------CCCCEEEEEEeccccccchhhhhHH--------HHHHHHHHhhccCCCCcceE
Confidence 678899999999999998863 3578899999875432211111222 466655544 69999999
Q ss_pred cccccccCc-----eeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchh
Q 000399 241 LGLLKTSGL-----ITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 241 ~~~~~~~~~-----l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
++++...+. ++++|||++++|.+++.......+++..++.++.|++.||.|||+++++|+||||+||+++.++
T Consensus 67 ~~~~~~~~~~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~-- 144 (287)
T cd07838 67 LDVCHGPRTDRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDG-- 144 (287)
T ss_pred EEEEeeccCCCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCC--
Confidence 999988776 9999999999999988754444578889999999999999999999999999999999999998
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
.+||+|||+++....... .....++..|+|||++.+..++...|.|+.|++ .+..++|++
T Consensus 145 ~~~l~dfg~~~~~~~~~~------------~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~-------l~~l~~~~~ 204 (287)
T cd07838 145 QVKIADFGLARIYSFEMA------------LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCI-------FAELFRRRP 204 (287)
T ss_pred CEEEeccCcceeccCCcc------------cccccccccccChHHhccCCCCCcchhhhHHHH-------HHHHHhCCC
Confidence 799999999875432100 112236778999999988888999999999987 566666654
No 418
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.83 E-value=7.6e-22 Score=229.73 Aligned_cols=196 Identities=15% Similarity=0.150 Sum_probs=158.5
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
+-|++.+.||+|+||.||+|.+. .++..+|+|.+...... .....+. +|+.+++.++||||++++
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~------~~~~~~aiK~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~iv~~~ 68 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDN------RTQKVVAIKIIDLEEAE-DEIEDIQ--------QEITVLSQCDSPYVTKYY 68 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEEC------CCCcEEEEEEeccccch-HHHHHHH--------HHHHHHHhcCCCCEeEEE
Confidence 34888999999999999988753 46789999987643221 2222333 589999999999999999
Q ss_pred ccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhc
Q 000399 242 GLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
+++..++..|+||||+++ +|.+++.. ..++...+..++.|++.|+.|||++|++|+||||+||+++.++ .++|+
T Consensus 69 ~~~~~~~~~~lv~e~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~--~~~l~ 143 (277)
T cd06641 69 GSYLKDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHG--EVKLA 143 (277)
T ss_pred EEEEeCCeEEEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCC--CEEEe
Confidence 999999999999999997 99988862 3468888999999999999999999999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++....... ......++..|++||.+.+..++...|.|+.|++ .+..+.|+.+
T Consensus 144 dfg~~~~~~~~~~-----------~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~-------l~~l~~g~~p 200 (277)
T cd06641 144 DFGVAGQLTDTQI-----------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGIT-------AIELAKGEPP 200 (277)
T ss_pred ecccceecccchh-----------hhccccCCccccChhhhccCCCCchhhHHHHHHH-------HHHHHcCCCC
Confidence 9999875432100 0112247788999999988888889999999987 5666677754
No 419
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.83 E-value=1.6e-20 Score=206.55 Aligned_cols=248 Identities=15% Similarity=0.185 Sum_probs=183.8
Q ss_pred ccCCCCCCCCCcccccccCccCCCCceEeee---eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccc
Q 000399 1288 FPTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRIN 1364 (1566)
Q Consensus 1288 ~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~---~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~ 1364 (1566)
.|||-.. .+++.||+|++||+|+++.. .-+....|.++|.+++|+.||+.+++|+. |+.+++||+.+++
T Consensus 34 ~FSP~~~----~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~----Dk~~k~wDL~S~Q 105 (347)
T KOG0647|consen 34 AFSPQAD----NLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGC----DKQAKLWDLASGQ 105 (347)
T ss_pred EeccccC----ceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeecc----CCceEEEEccCCC
Confidence 4888221 23889999999999999863 23566789999999999999999999998 9999999999996
Q ss_pred cccccccccccccceEEeecCC--ceeec--cCcEEEeecCCCcEEEEeeccccc--------ccccCCCCCcccccccC
Q 000399 1365 CVSGYYGHEEVVNDICVLSSSG--RIASC--DGTLHVWNSQTGKLLSVFAEQSMD--------SLHGGSPSSSISKINTD 1432 (1566)
Q Consensus 1365 ~i~tl~gH~~~V~sVafsp~g~--~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~--------~~~~~~~~~~~~~~~~~ 1432 (1566)
+..+..|.++|.++.|-+... .|++| |++||.||.+...++.+++-+..- ....+..+..+.++...
T Consensus 106 -~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~ 184 (347)
T KOG0647|consen 106 -VSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAVVATAERHIAVYNLE 184 (347)
T ss_pred -eeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCceeEEEecCCcEEEEEcC
Confidence 455678999999999998877 56777 999999999999888887654321 11111111222222111
Q ss_pred CCCCCCCc----ccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCC--ceeeeeccCCcccCchh---h
Q 000399 1433 QVGMLNSN----TLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG--QKLHLWRGEPTELGFPS---L 1503 (1566)
Q Consensus 1433 ~~~~~~~~----~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg--~~l~~~~~h~~~v~~~~---~ 1503 (1566)
+. ...+. ...-.+.||+..++ ....+.|+-.|.+-+-.+..+ +.-.+|+.|.......+ .
T Consensus 185 n~-~te~k~~~SpLk~Q~R~va~f~d----------~~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYa 253 (347)
T KOG0647|consen 185 NP-PTEFKRIESPLKWQTRCVACFQD----------KDGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYA 253 (347)
T ss_pred CC-cchhhhhcCcccceeeEEEEEec----------CCceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEE
Confidence 10 01111 12344667766655 566799999999999888876 66778888875322122 4
Q ss_pred HHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1504 VSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1504 V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
|++|+|+| .-..|+|.++||+..+||-.....+.+.+.|..+|++.+|+.+|
T Consensus 254 VNsi~FhP-----------~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G 305 (347)
T KOG0647|consen 254 VNSIAFHP-----------VHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNG 305 (347)
T ss_pred ecceEeec-----------ccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCC
Confidence 55666655 33589999999999999999999999999999999999999887
No 420
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.83 E-value=3.9e-21 Score=231.20 Aligned_cols=199 Identities=18% Similarity=0.237 Sum_probs=168.4
Q ss_pred ccCCCceeccCCCCCCCCCcccccccCccCCCCceEee-------e---eehhhhhccCcceeeeecCcceEEEeeccCC
Q 000399 1280 MKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKA-------S---ILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1349 (1566)
Q Consensus 1280 ~~H~~~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~-------~---~l~tl~gH~~~V~slafspd~~~LaSgS~~~ 1349 (1566)
..|++-|.+..- ...++.|++++|.|+++++|++.. . +..+-+.|.+.|+||+++|++.+++|||.
T Consensus 408 ~gH~~svgava~--~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~Sq-- 483 (775)
T KOG0319|consen 408 NGHTNSVGAVAG--SKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQ-- 483 (775)
T ss_pred cccccccceeee--cccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEeccc--
Confidence 357777766322 113457899999999999999875 1 22466789999999999999999999998
Q ss_pred CcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCccc
Q 000399 1350 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1566)
Q Consensus 1350 ~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~ 1427 (1566)
|+|.+||+++.+....++.||+..|+||.|++..+.+++| |+|||||.+.++.|+++|.+|.
T Consensus 484 --DktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~-------------- 547 (775)
T KOG0319|consen 484 --DKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHT-------------- 547 (775)
T ss_pred --ccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCcc--------------
Confidence 9999999999999999999999999999999999999766 9999999999999999999874
Q ss_pred ccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHh
Q 000399 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1507 (1566)
Q Consensus 1428 ~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv 1507 (1566)
..|..++|-.+ |+.|++|+.||-|++|++.++.|+.++.+|. +.|.++
T Consensus 548 ----------------~aVlra~F~~~----------~~qliS~~adGliKlWnikt~eC~~tlD~H~------DrvWaL 595 (775)
T KOG0319|consen 548 ----------------SAVLRASFIRN----------GKQLISAGADGLIKLWNIKTNECEMTLDAHN------DRVWAL 595 (775)
T ss_pred ----------------ceeEeeeeeeC----------CcEEEeccCCCcEEEEeccchhhhhhhhhcc------ceeEEE
Confidence 44666666655 8999999999999999999999999999884 445555
Q ss_pred hccCCCcccCCCcccchhHHHhccCCCceeEEee
Q 000399 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDV 1541 (1566)
Q Consensus 1508 ~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~ 1541 (1566)
..+ +.+..++||+.||.|.+|.=
T Consensus 596 ~~~-----------~~~~~~~tgg~Dg~i~~wkD 618 (775)
T KOG0319|consen 596 SVS-----------PLLDMFVTGGGDGRIIFWKD 618 (775)
T ss_pred eec-----------CccceeEecCCCeEEEEeec
Confidence 554 45568999999999999953
No 421
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.82 E-value=1e-21 Score=233.37 Aligned_cols=197 Identities=14% Similarity=0.138 Sum_probs=158.2
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
..+.|...+.||+|+||+||+|++. .++..+|+|.+........ ....+. +|+.+++.++||||+
T Consensus 19 ~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~ik~~~~~~~~~~~~~~~~~--------~E~~~l~~l~h~~iv 84 (313)
T cd06633 19 PEEIFVGLHEIGHGSFGAVYFATNS------HTNEVVAVKKMSYSGKQTNEKWQDII--------KEVKFLQQLKHPNTI 84 (313)
T ss_pred HHHHhhcceeeccCCCeEEEEEEEC------CCCcEEEEEEEeccccCchHHHHHHH--------HHHHHHHhCCCCCCc
Confidence 3445888899999999999998753 4688999999875433222 112233 589999999999999
Q ss_pred cccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 239 PVLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 239 ~l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
++++++.+....|+||||+.++|.+++... ...+++..++.++.||+.||.|||++||+||||||+||+++.++ .+|
T Consensus 85 ~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~--~~k 161 (313)
T cd06633 85 EYKGCYLKEHTAWLVMEYCLGSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPG--QVK 161 (313)
T ss_pred cEEEEEEeCCEEEEEEecCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCC--CEE
Confidence 999999999999999999999888888642 34578888899999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc---ccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||++..... .....|+..|+|||++. ...++..+|+|+.|++ .+..+.|+.+
T Consensus 162 L~dfg~~~~~~~---------------~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvi-------l~el~~g~~p 219 (313)
T cd06633 162 LADFGSASKSSP---------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT-------CIELAERKPP 219 (313)
T ss_pred EeecCCCcccCC---------------CCCccccccccChhhccccCCCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 999999864221 01124778899999984 3557788999999987 5566777653
No 422
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.82 E-value=3.1e-22 Score=230.59 Aligned_cols=194 Identities=18% Similarity=0.203 Sum_probs=160.9
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|+..+.||+|+||.||+|.++ .++..+|+|.+..... .....+++ +|+++++.++||||+++++
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~-~~~~~~~~--------~e~~~l~~~~~~~i~~~~~ 66 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHR------PTGKIMAVKTIRLEIN-EAIQKQIL--------RELDILHKCNSPYIVGFYG 66 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEc------CCCcEEEEEEEecccC-hHHHHHHH--------HHHHHHHHCCCCchhhhhe
Confidence 6888999999999999998863 4688899999876432 22233444 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhhhhhc
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
.+..++.+++|+||+++ +|.+++...+ ..+++..+..++.|++.||.|||+ .|++||||||+||+++.++ .+||+
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~--~~~l~ 143 (265)
T cd06605 67 AFYNNGDISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRG--QIKLC 143 (265)
T ss_pred eeecCCEEEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCC--CEEEe
Confidence 99999999999999996 9999997432 567888899999999999999999 9999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|||.+........ ....++..|+|||.+.+..++...|+|+.|++ .+..+.|+.
T Consensus 144 d~g~~~~~~~~~~-------------~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~-------l~~l~~g~~ 197 (265)
T cd06605 144 DFGVSGQLVNSLA-------------KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLS-------LIELATGRF 197 (265)
T ss_pred ecccchhhHHHHh-------------hcccCChhccCHHHHcCCCCCchhhHHHHHHH-------HHHHHhCCC
Confidence 9999875431100 00237788999999988888999999999987 666777764
No 423
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.82 E-value=1.1e-21 Score=228.19 Aligned_cols=198 Identities=21% Similarity=0.238 Sum_probs=157.6
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
|++.+.||+|+||.||+|.+. .++..+|+|.+............+. +|+.+++.++||||++++++
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~------~~~~~~~~K~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~ 66 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNK------KTGELVALKKIRMENEKEGFPITAI--------REIKLLQKLRHPNIVRLKEI 66 (287)
T ss_pred CeeeEEeccCCCeEEEEEEEC------CCCeEEEEEEEecccccccchHHHH--------HHHHHHHhccCCCeeeheee
Confidence 678899999999999998853 4578899999986531222122233 59999999999999999999
Q ss_pred cccc--CceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 244 LKTS--GLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 244 ~~~~--~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
+... +..++||||++++|.+++... ...+++..++.++.||+.||.|||++|++|+||||+||++++++ .+||+|
T Consensus 67 ~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~--~~~l~d 143 (287)
T cd07840 67 VTSKGKGSIYMVFEYMDHDLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDG--VLKLAD 143 (287)
T ss_pred EecCCCCcEEEEeccccccHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCC--CEEEcc
Confidence 9888 899999999999999988743 24578889999999999999999999999999999999999998 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++........ ......++..|+|||.+.+ ..++.+.|+|+.|++ .+..+.|+.+
T Consensus 144 ~g~~~~~~~~~~~----------~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~-------l~el~t~~~p 201 (287)
T cd07840 144 FGLARPYTKRNSA----------DYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCI-------LAELFLGKPI 201 (287)
T ss_pred ccceeeccCCCcc----------cccccccccccCCceeeEccccCChHHHHHHHHHH-------HHHHHhCCCC
Confidence 9999865431110 0011235678999997754 457889999999987 6666777653
No 424
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.82 E-value=1.1e-21 Score=226.95 Aligned_cols=195 Identities=19% Similarity=0.210 Sum_probs=152.0
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
+.....||+|+||.||+|++. .++..+|+|.+.... ....+.+. +|+.+++.++||||++++++
T Consensus 10 ~~~~~~lg~g~~g~v~~~~~~------~~~~~v~~k~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~iv~~~~~ 73 (268)
T cd06624 10 NGERVVLGKGTYGIVYAARDL------STQVRIAIKEIPERD--SRYVQPLH--------EEIALHSYLKHRNIVQYLGS 73 (268)
T ss_pred CCceEEEecCCceEEEEeEec------CCCcEEEEEEecCCC--HHHHHHHH--------HHHHHHHhcCCCCeeeeeee
Confidence 334568999999999998752 467889999876532 22222333 59999999999999999999
Q ss_pred ccccCceeeeccCCcc-chhhhhccCccccc--chhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc-cchhhhhh
Q 000399 244 LKTSGLITSVIPKTPY-TLENILQFSPNALK--SEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD-SCWSWLYI 319 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l--~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~-~~~~~vKL 319 (1566)
+...+..++||||+++ +|.+++... ...+ ++..++.++.||+.||.|||++||+||||||+||+++. ++ .+||
T Consensus 74 ~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~--~~~l 150 (268)
T cd06624 74 DSENGFFKIFMEQVPGGSLSALLRSK-WGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSG--VVKI 150 (268)
T ss_pred eccCCEEEEEEecCCCCCHHHHHHHh-cccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCC--eEEE
Confidence 9999999999999986 999999742 2233 67778889999999999999999999999999999986 44 6999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc--hhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD--WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~--y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||++........ ......++..|+|||++.+.. ++...|+|+.|++ .+..++|+.+
T Consensus 151 ~dfg~~~~~~~~~~-----------~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvv-------l~~l~~g~~p 210 (268)
T cd06624 151 SDFGTSKRLAGINP-----------CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCT-------IVEMATGKPP 210 (268)
T ss_pred ecchhheecccCCC-----------ccccCCCCccccChhhhccccccCCchhhhHHHHHH-------HHHHHhCCCC
Confidence 99999875432100 001123678899999986543 7789999999987 6666777654
No 425
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.82 E-value=1e-21 Score=230.11 Aligned_cols=197 Identities=17% Similarity=0.191 Sum_probs=158.2
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVL 241 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~ 241 (1566)
++|+..+.||.|++|.||+|.+. .++..+|+|.+...... ....++. +|+++++.++||||++++
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~~-~~~~~~~--------~e~~~l~~l~h~~iv~~~ 65 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLK------NTGMIFALKTITTDPNP-DLQKQIL--------RELEINKSCKSPYIVKYY 65 (287)
T ss_pred CceEEEEEeccCCceEEEEEEEC------CCCeEEEEEEEecCCch-HHHHHHH--------HHHHHHHhCCCCCeeeee
Confidence 36889999999999999998863 46788999998754221 2223344 599999999999999999
Q ss_pred cccccc--CceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 242 GLLKTS--GLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 242 ~~~~~~--~~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
+++... +.+|+||||+++ +|.+++... ....+++..+..++.||+.||.|||+.|++||||+|+||+++.++ .
T Consensus 66 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~--~ 143 (287)
T cd06621 66 GAFLDESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKG--Q 143 (287)
T ss_pred eEEEccCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCC--e
Confidence 988643 478999999987 998887531 234478888999999999999999999999999999999999988 7
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
++|+|||++....... .....++..|+|||.+.+..++..+|+|+.|++ .+..+.|+.+
T Consensus 144 ~~l~dfg~~~~~~~~~-------------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i-------l~~l~~g~~p 202 (287)
T cd06621 144 VKLCDFGVSGELVNSL-------------AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLT-------LLEVAQNRFP 202 (287)
T ss_pred EEEeeccccccccccc-------------cccccCCccccCHHHhcCCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 9999999987543100 011236778999999988889999999999988 6677777654
No 426
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.82 E-value=1e-21 Score=225.72 Aligned_cols=196 Identities=18% Similarity=0.174 Sum_probs=162.3
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||+|.+. .++..+++|++...... .....+. +|+.++..++||||+++++
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~------~~~~~~~vk~~~~~~~~-~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHK------PTGKIYALKKIHVDGDE-EFRKQLL--------RELKTLRSCESPYVVKCYG 66 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEc------CCCcEEEEEEeccCcch-HHHHHHH--------HHHHHHHhcCCCCeeeEEE
Confidence 6889999999999999998863 46889999998764322 2223344 5899999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhhhhhc
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~vKL~ 320 (1566)
++...+..++||||+++ +|.+++.. ...+++..+..++.|++.|+.|||+ +|++||||+|+||+++.++ .++|+
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~--~~~l~ 142 (264)
T cd06623 67 AFYKEGEISIVLEYMDGGSLADLLKK--VGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKG--EVKIA 142 (264)
T ss_pred EEccCCeEEEEEEecCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCC--CEEEc
Confidence 99999999999999996 99999974 3567889999999999999999999 9999999999999999988 79999
Q ss_pred CcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 321 DKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 321 DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|||+++........ .....++..|+|||.+.+..++...|.|+.|++ .+..+.|+.+
T Consensus 143 df~~~~~~~~~~~~-----------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i-------l~~l~tg~~p 199 (264)
T cd06623 143 DFGISKVLENTLDQ-----------CNTFVGTVTYMSPERIQGESYSYAADIWSLGLT-------LLECALGKFP 199 (264)
T ss_pred cCccceecccCCCc-----------ccceeecccccCHhhhCCCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 99998865421110 012237788999999988888889999999987 7777777654
No 427
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.82 E-value=1.2e-21 Score=227.65 Aligned_cols=195 Identities=13% Similarity=0.208 Sum_probs=156.6
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc---CCCccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR---HPNVAP 239 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~---HpNIV~ 239 (1566)
.|++++.||+|+||.||+|.+. .++..+|+|.+.... ......++. +|+.+++.++ ||||++
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~------~~~~~~~iK~~~~~~-~~~~~~~~~--------~e~~~l~~l~~~~~~~vi~ 66 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHV------PTGRVVALKIINLDT-PDDDVSDIQ--------REVALLSQLRQSQPPNITK 66 (277)
T ss_pred hhhhhhheeccCCceEEEEEEc------CCCcEEEEEEecCCC-CchhHHHHH--------HHHHHHHHhccCCCCCeee
Confidence 4888999999999999998863 568899999986532 222222333 5888888886 999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++++......|+||||+++ +|.++++. ..+++..+..++.|++.||.|||+.||+||||+|+||+++.++ .++
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~--~~~ 141 (277)
T cd06917 67 YYGSYLKGPRLWIIMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTG--NVK 141 (277)
T ss_pred EeeeeeeCCEEEEEEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCC--CEE
Confidence 99999999999999999987 99999863 3578888999999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccc-cchhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS-MDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~-~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||++........ ......|+..|+|||.+.+ ..++..+|.|+.|++ .+..++|+.+
T Consensus 142 l~dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~-------l~~ll~g~~p 201 (277)
T cd06917 142 LCDFGVAALLNQNSS-----------KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGIT-------IYEMATGNPP 201 (277)
T ss_pred EccCCceeecCCCcc-----------ccccccCCcceeCHHHhccCCccccchhHHHHHHH-------HHHHHhCCCC
Confidence 999999875442110 0112247888999998764 456789999999987 6667777764
No 428
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.82 E-value=8.5e-22 Score=230.90 Aligned_cols=198 Identities=17% Similarity=0.192 Sum_probs=155.4
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|.+. .++..+|+|.+...... ..++. +|+.+++++ +||||++
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~------~~~~~~aik~~~~~~~~---~~~~~--------~e~~~l~~l~~h~ni~~ 83 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNK------KDGSLAAVKILDPISDV---DEEIE--------AEYNILQSLPNHPNVVK 83 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEEC------CCCCEEEEEEecccccH---HHHHH--------HHHHHHHHhcCCCCeEE
Confidence 567999999999999999998753 56888999998653211 11222 578888888 7999999
Q ss_pred cccccccc-----CceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc
Q 000399 240 VLGLLKTS-----GLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD 311 (1566)
Q Consensus 240 l~~~~~~~-----~~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~ 311 (1566)
+++++... +..|+||||+++ +|.++++.. ....+++..++.++.|++.||.|||++||+||||||+||+++.
T Consensus 84 ~~~~~~~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~ 163 (291)
T cd06639 84 FYGMFYKADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTT 163 (291)
T ss_pred EEEEEEeccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcC
Confidence 99998654 368999999987 999988631 2345788889999999999999999999999999999999999
Q ss_pred cchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc-----chhhccccccccccCCchhhhH
Q 000399 312 SCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-----DWHSQFNRWWRGELSNFEYLLF 386 (1566)
Q Consensus 312 ~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-----~y~~~~d~Ws~G~isnfeyL~~ 386 (1566)
++ .+||+|||+++....... ......++..|+|||++... .++.+.|+|+.|++ .
T Consensus 164 ~~--~~kl~dfg~~~~~~~~~~-----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi-------~ 223 (291)
T cd06639 164 EG--GVKLVDFGVSAQLTSTRL-----------RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGIT-------A 223 (291)
T ss_pred CC--CEEEeecccchhcccccc-----------cccCccCCccccChhhhcCCCCcccccCCccchHHHHHH-------H
Confidence 88 699999999885442111 01123478889999987543 35778999999988 6
Q ss_pred HHhhccccc
Q 000399 387 LNKLAGRRW 395 (1566)
Q Consensus 387 ln~~agrs~ 395 (1566)
+..+.|+.+
T Consensus 224 ~el~~g~~p 232 (291)
T cd06639 224 IELGDGDPP 232 (291)
T ss_pred HHHhhCCCC
Confidence 677788753
No 429
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.82 E-value=2e-21 Score=225.71 Aligned_cols=196 Identities=21% Similarity=0.269 Sum_probs=158.2
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
|+..+.||+|+||.||+|++. .++..+|+|.+............+. +|+.+++.++||||++++++
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~------~~~~~~~iK~~~~~~~~~~~~~~~~--------~e~~~l~~~~~~~i~~~~~~ 66 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDK------KTGEIVALKKIRLDNEEEGIPSTAL--------REISLLKELKHPNIVKLLDV 66 (282)
T ss_pred CeeehcccccCcceEEEeeec------CCCcEEEEEEeccccccccccHHHH--------HHHHHHHhcCCCCHHHHHhh
Confidence 667889999999999998863 4688999999886532222222233 58899999999999999999
Q ss_pred ccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcC
Q 000399 244 LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFG 323 (1566)
+.+.+..++||||++++|.+++.... ..+++..++.++.|++.||.|||++||+||||||+||++++++ .+||+|||
T Consensus 67 ~~~~~~~~~v~e~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~--~~~l~d~g 143 (282)
T cd07829 67 IHTERKLYLVFEYCDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDG--VLKLADFG 143 (282)
T ss_pred hhcCCceEEEecCcCcCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCC--CEEEecCC
Confidence 99999999999999999999998432 4578899999999999999999999999999999999999988 79999999
Q ss_pred CCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhcccc
Q 000399 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
+++........ .....++..|+|||.+.+. .++...|+|+.|++ .+..++|+.
T Consensus 144 ~~~~~~~~~~~-----------~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~-------l~~l~~~~~ 197 (282)
T cd07829 144 LARAFGIPLRT-----------YTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCI-------FAEMITGKP 197 (282)
T ss_pred cccccCCCccc-----------cCccccCcCcCChHHhcCCcCCCccccHHHHHHH-------HHHHHhCCC
Confidence 99864421110 0112256779999988766 77889999999987 666666654
No 430
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.82 E-value=6.3e-22 Score=236.58 Aligned_cols=195 Identities=17% Similarity=0.167 Sum_probs=160.6
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
-.++.++.++||+|.||+|++|.... -..+...||||.+..+.... ....|+ +|+.+|.+|+|||+|+
T Consensus 108 pee~i~l~e~LG~GsFgvV~rg~Wt~---psgk~V~VAVKclr~d~l~~-~mddfl--------rEas~M~~L~H~hliR 175 (1039)
T KOG0199|consen 108 PEEQIKLYELLGEGSFGVVKRGTWTQ---PSGKHVNVAVKCLRDDSLNA-IMDDFL--------REASHMLKLQHPHLIR 175 (1039)
T ss_pred cHHHHHHHHHhcCcceeeEeeccccC---CCCcEEeEEEEeccCCccch-hHHHHH--------HHHHHHHhccCcceeE
Confidence 35578889999999999999988643 22356779999998765443 445566 5999999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
|||+..+ ..+.||||+++. +|.+.|+......+.......|+.||+.||.||..+++|||||...|||+.... .||
T Consensus 176 LyGvVl~-qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllaspr--tVK 252 (1039)
T KOG0199|consen 176 LYGVVLD-QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPR--TVK 252 (1039)
T ss_pred Eeeeecc-chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccc--eee
Confidence 9999988 778999999995 999999975666788888889999999999999999999999999999999877 799
Q ss_pred hcCcCCCCcccccccc-CCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 319 ICDKPLVGFNSIADWC-TIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~-~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
|+||||.|.....+++ ......+ -.-.|.|||.+....++.+.|.|..|+-
T Consensus 253 I~DFGLmRaLg~ned~Yvm~p~rk---------vPfAWCaPEsLrh~kFShaSDvWmyGVT 304 (1039)
T KOG0199|consen 253 ICDFGLMRALGENEDMYVMAPQRK---------VPFAWCAPESLRHRKFSHASDVWMYGVT 304 (1039)
T ss_pred eecccceeccCCCCcceEecCCCc---------CcccccCHhHhccccccccchhhhhhhh
Confidence 9999999976654332 1111111 2335889999999999999999999975
No 431
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.82 E-value=1.1e-21 Score=224.07 Aligned_cols=199 Identities=20% Similarity=0.181 Sum_probs=163.4
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||++.+. .++..+|+|.+...........++. +|+++++.++|||++++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~~~~~~~ 66 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRK------SDGKLYVLKEIDLSNMSEKEREDAL--------NEVKILKKLNHPNIIKYYE 66 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEc------CCCcEEEEEEeecccCChHHHHHHH--------HHHHHHHhcCCCChhheEE
Confidence 5889999999999999998863 4678899999876543333333333 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCc--ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~--~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
.+...+..++|+||+++ +|.+++.... ...+++..+..++.|++.||.|||++|++|+||+|+||+++.++ .++|
T Consensus 67 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~--~~~l 144 (258)
T cd08215 67 SFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNG--LVKL 144 (258)
T ss_pred EEecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCC--cEEE
Confidence 99999999999999997 9999997532 35688899999999999999999999999999999999999988 6999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||++....... .......+++.|+|||.+.+..++...|.|+.|.+ .+..++|+.+
T Consensus 145 ~d~~~~~~~~~~~-----------~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~-------~~~l~~g~~p 202 (258)
T cd08215 145 GDFGISKVLSSTV-----------DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCV-------LYELCTLKHP 202 (258)
T ss_pred CCccceeecccCc-----------ceecceeeeecccChhHhccCCCCccccHHHHHHH-------HHHHHcCCCC
Confidence 9999998644211 01122347888999999988888899999999977 5666677654
No 432
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.82 E-value=4.6e-22 Score=232.58 Aligned_cols=198 Identities=17% Similarity=0.165 Sum_probs=156.2
Q ss_pred cccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCcccc
Q 000399 162 TALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPV 240 (1566)
Q Consensus 162 ~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~l 240 (1566)
++|+..+.||+|+||.||++.+. .++..+|+|.+...... .....+. +|+.++.++. ||||+++
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~------~~~~~~aiK~~~~~~~~-~~~~~~~--------~e~~~l~~~~~~~~iv~~ 68 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHK------PSGTIMAVKRIRSTVDE-KEQKRLL--------MDLDVVMRSSDCPYIVKF 68 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEEC------CCCCEEEEEEehhccCh-HHHHHHH--------HHHHHHHHhcCCCCEeee
Confidence 46888899999999999988863 56889999998754322 2223333 5888888886 9999999
Q ss_pred cccccccCceeeeccCCccchhhhhc---cCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhh
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQ---FSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~gsL~~~l~---~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
++++..++..+++|||++.+|.++.. ......+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .
T Consensus 69 ~~~~~~~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~--~ 146 (288)
T cd06616 69 YGALFREGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNG--N 146 (288)
T ss_pred eeEEecCCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCC--c
Confidence 99999999999999999876655443 2233568889999999999999999997 5999999999999999988 7
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc---chhhccccccccccCCchhhhHHHhhccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM---DWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~---~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
+||+|||+++....... .....|+..|+|||++.+. .++...|+|+.|++ .+..++|+
T Consensus 147 ~kl~dfg~~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~i-------l~el~~g~ 207 (288)
T cd06616 147 IKLCDFGISGQLVDSIA------------KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGIT-------LYEVATGK 207 (288)
T ss_pred EEEeecchhHHhccCCc------------cccccCccCccCHHHhccccccCCcchhhhhHHHHH-------HHHHHhCC
Confidence 99999999975432100 0112377889999998765 68889999999987 56667776
Q ss_pred cc
Q 000399 394 RW 395 (1566)
Q Consensus 394 s~ 395 (1566)
.+
T Consensus 208 ~p 209 (288)
T cd06616 208 FP 209 (288)
T ss_pred CC
Confidence 54
No 433
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.82 E-value=1.1e-21 Score=224.30 Aligned_cols=189 Identities=15% Similarity=0.125 Sum_probs=149.8
Q ss_pred eeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTS 247 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~ 247 (1566)
+.||+|+||.||+|.+ ..+..+|+|.+...... ....++. +|+++++.++||||+++++++...
T Consensus 1 ~~lg~g~~g~v~~~~~-------~~~~~v~~K~~~~~~~~-~~~~~~~--------~e~~~l~~l~~~~i~~~~~~~~~~ 64 (251)
T cd05041 1 EKIGKGNFGDVYKGVL-------KGNTEVAVKTCRSTLPP-DLKRKFL--------QEAEILKQYDHPNIVKLIGVCVQK 64 (251)
T ss_pred CccccCCCceEEEEEE-------eCCCcEEEEeccccCCH-HHHHHHH--------HHHHHHHhCCCCCeEEEEEEEecC
Confidence 4699999999998875 23888999987754322 2233444 599999999999999999999999
Q ss_pred CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCC
Q 000399 248 GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVG 326 (1566)
Q Consensus 248 ~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~ 326 (1566)
...++||||+++ +|.+++... ...++...+..++.|++.||.|||+++++||||||+||+++.++ .+||+|||+++
T Consensus 65 ~~~~~v~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~--~~~l~d~g~~~ 141 (251)
T cd05041 65 QPIYIVMELVPGGSLLTFLRKK-KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENN--VLKISDFGMSR 141 (251)
T ss_pred CCeEEEEEcCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCC--cEEEeeccccc
Confidence 999999999986 999998643 33467888899999999999999999999999999999999988 79999999998
Q ss_pred ccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhc
Q 000399 327 FNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLA 391 (1566)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~a 391 (1566)
.......... ......+..|+|||.+.+..++...|+|+.|++ .+..++
T Consensus 142 ~~~~~~~~~~---------~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i-------~~~l~t 190 (251)
T cd05041 142 EEEGGIYTVS---------DGLKQIPIKWTAPEALNYGRYTSESDVWSYGIL-------LWETFS 190 (251)
T ss_pred cccCCcceec---------cccCcceeccCChHhhccCCCCcchhHHHHHHH-------HHHHHh
Confidence 5431100000 001113456999999988888999999999987 555554
No 434
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.82 E-value=1.2e-21 Score=224.20 Aligned_cols=197 Identities=17% Similarity=0.187 Sum_probs=161.3
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|+||.||++.++ .++..+|+|.+...........++. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRL------SDNQFYALKEVDLGSMSQKEREDAV--------NEIRILASVNHPNIISYKE 66 (256)
T ss_pred CceEeeeecCCCceeEEEEEEC------CCCCEEEEEEEehhhccHHHHHHHH--------HHHHHHHhCCCCCchhhhh
Confidence 4889999999999999998753 4678899999876543333333344 5899999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCc--ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSP--NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~--~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+....|+||||+++ +|.+++.... ...+++..+..++.|++.||.|||+.|++||||||+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~--~~kl 144 (256)
T cd08530 67 AFLDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAND--LVKI 144 (256)
T ss_pred hhccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCC--cEEE
Confidence 99999999999999987 9999986421 24577888899999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||+++..... . .....+++.|++||.+.+..++...|.|+.|++ .+..+.|+.+
T Consensus 145 ~d~g~~~~~~~~-------~------~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~-------~~~l~~g~~p 200 (256)
T cd08530 145 GDLGISKVLKKN-------M------AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCL-------LYEMATFAPP 200 (256)
T ss_pred eeccchhhhccC-------C------cccccCCccccCHHHHCCCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 999999865421 0 011236778999999988888889999999987 5566677754
No 435
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=6.1e-20 Score=204.24 Aligned_cols=250 Identities=13% Similarity=0.165 Sum_probs=191.1
Q ss_pred Cceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEe
Q 000399 1284 PWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWEL 1360 (1566)
Q Consensus 1284 ~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl 1360 (1566)
+.+.+ |+++|.. +++++.|.++++||...+ .+.++..+.-.|..++|......++.+|. ..|.+||.-++
T Consensus 15 ~~i~sl~fs~~G~~-----litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sSt--k~d~tIryLsl 87 (311)
T KOG1446|consen 15 GKINSLDFSDDGLL-----LITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSST--KEDDTIRYLSL 87 (311)
T ss_pred CceeEEEecCCCCE-----EEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccC--CCCCceEEEEe
Confidence 44555 8999998 999999999999998866 77888888889999999765555555554 35899999999
Q ss_pred cccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCC----------CCcccc
Q 000399 1361 TRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSP----------SSSISK 1428 (1566)
Q Consensus 1361 ~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~----------~~~~~~ 1428 (1566)
.+.++++.+.||...|++|+.+|-+..++|+ |++|++||+++.+|...+.... ..+++..+ +..+++
T Consensus 88 ~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~-~pi~AfDp~GLifA~~~~~~~IkL 166 (311)
T KOG1446|consen 88 HDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSG-RPIAAFDPEGLIFALANGSELIKL 166 (311)
T ss_pred ecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCC-CcceeECCCCcEEEEecCCCeEEE
Confidence 9999999999999999999999999988766 9999999999888876664322 12222222 222333
Q ss_pred cccCCC-----CCCCCc-ccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchh
Q 000399 1429 INTDQV-----GMLNSN-TLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1502 (1566)
Q Consensus 1429 ~~~~~~-----~~~~~~-~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~ 1502 (1566)
++.+.. ....+. .-......+.|+ |||++++.++..+.+.+.|.-+|..+.++.++.....
T Consensus 167 yD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS----------~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~--- 233 (311)
T KOG1446|consen 167 YDLRSFDKGPFTTFSITDNDEAEWTDLEFS----------PDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGN--- 233 (311)
T ss_pred EEecccCCCCceeEccCCCCccceeeeEEc----------CCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCC---
Confidence 332211 111111 122334445555 5599999999999999999999999999988854310
Q ss_pred hHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeec-cCceeeEeeeecc
Q 000399 1503 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA-HDGYVTKVRIISK 1565 (1566)
Q Consensus 1503 ~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~g-H~~~V~~Vafspd 1565 (1566)
......|+|||++|++|+.||+|.+|++++|+.+..+++ |.+++.++.|+|.
T Consensus 234 -----------~~~~a~ftPds~Fvl~gs~dg~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~ 286 (311)
T KOG1446|consen 234 -----------LPLSATFTPDSKFVLSGSDDGTIHVWNLETGKKVAVLRGPNGGPVSCVRFNPR 286 (311)
T ss_pred -----------cceeEEECCCCcEEEEecCCCcEEEEEcCCCcEeeEecCCCCCCccccccCCc
Confidence 012345779999999999999999999999999999999 7999999999984
No 436
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.82 E-value=1.3e-21 Score=231.89 Aligned_cols=202 Identities=16% Similarity=0.137 Sum_probs=153.8
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
|.+.+.+|.|+++.|+++. .++..+|+|++............+. +|+.+|+.++||||++++++
T Consensus 4 ~~i~~~~~~~~~v~~~~~~--------~~~~~~avK~~~~~~~~~~~~~~~~--------~Ei~~l~~l~h~~i~~~~~~ 67 (314)
T cd08216 4 TLIGKCFEDLMIVHLAKHK--------PTNTLVAVKKINLDSCSKEDLKLLQ--------QEIITSRQLQHPNILPYVTS 67 (314)
T ss_pred hhhhHhhcCCceEEEEEec--------CCCCEEEEEEEeccccchhHHHHHH--------HHHHHHHhcCCcchhhhhhe
Confidence 4455556666666666544 3688999999876533333333333 59999999999999999999
Q ss_pred ccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 244 LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
+...+..|++|||+++ +|.+++.......+++..++.+++|++.||.|||+++|+||||||+||+++.++ .+||+||
T Consensus 68 ~~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~--~~kl~d~ 145 (314)
T cd08216 68 FIVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDG--KVVLSGL 145 (314)
T ss_pred eecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCC--ceEEecC
Confidence 9999999999999996 999999754344578888999999999999999999999999999999999988 6999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCcccccccccccccc--cchhhccccccccccCCchhhhHHHhhcccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQS--MDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~--~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|.+.......... ...........++..|+|||++.. ..|+...|+|+.|++ .+..+.|+.
T Consensus 146 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~i-------l~el~~g~~ 208 (314)
T cd08216 146 RYSVSMIKHGKRQ----RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGIT-------ACELANGHV 208 (314)
T ss_pred ccceeeccccccc----cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHH-------HHHHHhCCC
Confidence 9987543211100 000111122346778999999865 357889999999987 667777764
No 437
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.82 E-value=1e-21 Score=225.95 Aligned_cols=189 Identities=14% Similarity=0.086 Sum_probs=150.2
Q ss_pred ceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCC-CCcccCCCcccccccc
Q 000399 167 IAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSV-PGCLRHPNVAPVLGLL 244 (1566)
Q Consensus 167 ~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~i-L~~l~HpNIV~l~~~~ 244 (1566)
++.||+|+||.||+|.+. .++..+|+|.+.+...... ....+. .|..+ ....+||||+++++++
T Consensus 1 ~~~l~~g~~~~v~~a~~~------~~~~~vavK~~~~~~~~~~~~~~~~~--------~e~~~~~~~~~~~~i~~~~~~~ 66 (260)
T cd05611 1 LKPISKGAFGSVYLAKKR------STGDYFAIKVLKKSDMIAKNQVTNVK--------AERAIMMIQGESPYVAKLYYSF 66 (260)
T ss_pred CccCCcCCCeeEEEEEec------CCCCeEEEEEecchhhhHHHHHHHHH--------HHHHHHhhcCCCCCeeeeeeeE
Confidence 367999999999998863 4678899999875432211 111122 23333 3455899999999999
Q ss_pred cccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcC
Q 000399 245 KTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1566)
Q Consensus 245 ~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFG 323 (1566)
...+.+|+||||+++ +|.++++. .+.+++..+..++.|++.||.|||+.+|+||||||+||+++.++ .+||+|||
T Consensus 67 ~~~~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~--~~~l~dfg 142 (260)
T cd05611 67 QSKDYLYLVMEYLNGGDCASLIKT--LGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTG--HLKLTDFG 142 (260)
T ss_pred EcCCeEEEEEeccCCCCHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCC--cEEEeecc
Confidence 999999999999987 99999973 34578899999999999999999999999999999999999988 79999999
Q ss_pred CCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+++.... .....++..|++||.+.+..++...|+|+.|++ .+..+.|+.+
T Consensus 143 ~~~~~~~---------------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~i-------l~~l~~g~~p 192 (260)
T cd05611 143 LSRNGLE---------------NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCV-------IFEFLFGYPP 192 (260)
T ss_pred cceeccc---------------cccCCCCcCccChhhhcCCCCcchhhhHHHHHH-------HHHHHHCCCC
Confidence 9875331 011236778999999988888889999999987 6667777754
No 438
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.82 E-value=1.3e-21 Score=226.94 Aligned_cols=189 Identities=17% Similarity=0.154 Sum_probs=150.7
Q ss_pred hcccccceee--eecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCc
Q 000399 161 MTALFPIAFI--GICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNV 237 (1566)
Q Consensus 161 ~~~y~~~~~I--G~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNI 237 (1566)
.++|++.+.+ |+|+||.||++.++ .++..+|+|.+....... .|+.+...+ +||||
T Consensus 13 ~~~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~~k~~~~~~~~~---------------~e~~~~~~~~~h~~i 71 (267)
T PHA03390 13 LKNCEIVKKLKLIDGKFGKVSVLKHK------PTQKLFVQKIIKAKNFNA---------------IEPMVHQLMKDNPNF 71 (267)
T ss_pred HHhhccccceeecCCCceEEEEEEEc------CCCcEEEEEEEehhhcch---------------hhHHHHHHhhcCCCE
Confidence 4567777776 99999999998863 568889999986532211 122111112 69999
Q ss_pred ccccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 238 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 238 V~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
+++++.|...+..|+||||+++ +|.+++.. ...+++..++.++.|+++||.|||+.|++||||||+||+++.++. .
T Consensus 72 v~~~~~~~~~~~~~iv~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~-~ 148 (267)
T PHA03390 72 IKLYYSVTTLKGHVLIMDYIKDGDLFDLLKK--EGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKD-R 148 (267)
T ss_pred EEEEEEEecCCeeEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCC-e
Confidence 9999999999999999999986 99999974 336889999999999999999999999999999999999998762 5
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
++|+|||+++..... ....++..|+|||++.+..++...|+|+.|++ .+..++|+.+
T Consensus 149 ~~l~dfg~~~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~i-------l~~l~~g~~p 205 (267)
T PHA03390 149 IYLCDYGLCKIIGTP---------------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVL-------TYELLTGKHP 205 (267)
T ss_pred EEEecCccceecCCC---------------ccCCCCCcccChhhhcCCCCCchhhHHHHHHH-------HHHHHHCCCC
Confidence 999999998754310 01136788999999998889999999999987 6667777643
No 439
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.82 E-value=1.7e-21 Score=222.25 Aligned_cols=197 Identities=18% Similarity=0.202 Sum_probs=161.3
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|++.+.||+|++|.||++.+. .++..+|+|.+............+. +|++++++++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNL------ETGDFVAIKQISLEKIKEEALKSIM--------QEIDLLKNLKHPNIVKYIG 66 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEc------CCCcEEEEEEecccccCHHHHHHHH--------HHHHHHHhCCCCCccEEEE
Confidence 5888999999999999988753 4678899999876543322333333 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++.+.+..++||||+++ +|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .+||+|
T Consensus 67 ~~~~~~~~~~v~e~~~~~~L~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~--~~~l~d 142 (254)
T cd06627 67 SIETSDSLYIILEYAENGSLRQIIKK--FGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDG--VVKLAD 142 (254)
T ss_pred EEEeCCEEEEEEecCCCCcHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCC--CEEEec
Confidence 99999999999999987 99999874 35678888999999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++........ .....++..|+|||.+.+..++...|+|+.|.+ .+..++|+..
T Consensus 143 ~~~~~~~~~~~~~-----------~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~-------l~~l~~g~~p 198 (254)
T cd06627 143 FGVATKLNDVSKD-----------DASVVGTPYWMAPEVIEMSGASTASDIWSLGCT-------VIELLTGNPP 198 (254)
T ss_pred cccceecCCCccc-----------ccccccchhhcCHhhhcCCCCCcchhHHHHHHH-------HHHHHhCCCC
Confidence 9999865421110 112247888999999887778889999999987 6667777653
No 440
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.82 E-value=1.3e-20 Score=206.67 Aligned_cols=214 Identities=11% Similarity=0.157 Sum_probs=175.2
Q ss_pred ccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEee-------------------eeehhhhhccCcceeeeec
Q 000399 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKA-------------------SILSSIRAHHGALRSVAVG 1336 (1566)
Q Consensus 1278 ~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~-------------------~~l~tl~gH~~~V~slafs 1336 (1566)
....|...+++ |||||.+ +||||.|..|+|.|++. ..++++..|.+.|+++.|+
T Consensus 107 ylt~HK~~cR~aafs~DG~l-----vATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FH 181 (430)
T KOG0640|consen 107 YLTSHKSPCRAAAFSPDGSL-----VATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFH 181 (430)
T ss_pred EEeecccceeeeeeCCCCcE-----EEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeec
Confidence 35568888887 9999998 99999999999999861 1578899999999999999
Q ss_pred CcceEEEeeccCCCcccceeeEEeccccccc--ccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecc
Q 000399 1337 QDECTVFTAGIGPGFKGTVQKWELTRINCVS--GYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQ 1412 (1566)
Q Consensus 1337 pd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~--tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h 1412 (1566)
|.+..|+|||. |++||++|.......+ .+-....+|.+|.|+|.|.+++.| -.++++||+.|-+|...-.
T Consensus 182 Pre~ILiS~sr----D~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcfvsan-- 255 (430)
T KOG0640|consen 182 PRETILISGSR----DNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCFVSAN-- 255 (430)
T ss_pred chhheEEeccC----CCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEeeecC--
Confidence 99999999998 9999999986543222 222356789999999999999766 4689999999988864322
Q ss_pred cccccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeec
Q 000399 1413 SMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWR 1492 (1566)
Q Consensus 1413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~ 1492 (1566)
...+|+..|++|.+++. |++.++||.||.|++||--+++|+.++.
T Consensus 256 -------------------------Pd~qht~ai~~V~Ys~t----------~~lYvTaSkDG~IklwDGVS~rCv~t~~ 300 (430)
T KOG0640|consen 256 -------------------------PDDQHTGAITQVRYSST----------GSLYVTASKDGAIKLWDGVSNRCVRTIG 300 (430)
T ss_pred -------------------------cccccccceeEEEecCC----------ccEEEEeccCCcEEeeccccHHHHHHHH
Confidence 12346788999999887 9999999999999999999999999986
Q ss_pred cCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeec
Q 000399 1493 GEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRA 1552 (1566)
Q Consensus 1493 ~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~g 1552 (1566)
...+ ...|. ..-|+.+|++|.+.+.|..+++|++.+|+++..+.|
T Consensus 301 ~AH~----gsevc-----------Sa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtG 345 (430)
T KOG0640|consen 301 NAHG----GSEVC-----------SAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTG 345 (430)
T ss_pred hhcC----Cceee-----------eEEEccCCeEEeecCCcceeeeeeecCCceEEEEec
Confidence 4411 11222 234567889999999999999999999999999875
No 441
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.82 E-value=7.4e-22 Score=228.94 Aligned_cols=191 Identities=18% Similarity=0.223 Sum_probs=146.0
Q ss_pred eeeeecchhhHHHHHhhhccCCcchh--hccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcccccccc
Q 000399 168 AFIGICSYSIFEELASNFLSGCLEDC--VLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVLGLL 244 (1566)
Q Consensus 168 ~~IG~G~fG~Vy~a~~~~~~~~~~~~--~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l~~~~ 244 (1566)
+.||+|+||.||+|+++ .++ ..+|+|.+.... .......+. +|+.++.++ +||||+++++++
T Consensus 1 ~~lg~g~~g~v~~~~~~------~~~~~~~~~~k~~~~~~-~~~~~~~~~--------~E~~~l~~l~~h~~iv~~~~~~ 65 (270)
T cd05047 1 DVIGEGNFGQVLKARIK------KDGLRMDAAIKRMKEYA-SKDDHRDFA--------GELEVLCKLGHHPNIINLLGAC 65 (270)
T ss_pred CcCCCCCCceEEEEEEc------CCCCeeEEEEEEccccC-CHHHHHHHH--------HHHHHHHhhccCCCeeeEEEEE
Confidence 36899999999998752 233 346778766421 112222333 589999999 799999999999
Q ss_pred cccCceeeeccCCcc-chhhhhccCc--------------ccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccc
Q 000399 245 KTSGLITSVIPKTPY-TLENILQFSP--------------NALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLL 309 (1566)
Q Consensus 245 ~~~~~l~LV~E~~~g-sL~~~l~~~~--------------~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl 309 (1566)
...+..|+||||+++ +|.+++.... ...++...++.++.|++.||+|||++|++||||||+||++
T Consensus 66 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili 145 (270)
T cd05047 66 EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV 145 (270)
T ss_pred ecCCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE
Confidence 999999999999986 9999986422 1236778889999999999999999999999999999999
Q ss_pred cccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHh
Q 000399 310 TDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNK 389 (1566)
Q Consensus 310 ~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~ 389 (1566)
+.++ .+||+|||+++..... . .. .....+..|+|||++....++...|+|+.|++ .+..
T Consensus 146 ~~~~--~~kl~dfgl~~~~~~~---~---~~------~~~~~~~~y~apE~~~~~~~~~~~Di~slG~i-------l~el 204 (270)
T cd05047 146 GENY--VAKIADFGLSRGQEVY---V---KK------TMGRLPVRWMAIESLNYSVYTTNSDVWSYGVL-------LWEI 204 (270)
T ss_pred cCCC--eEEECCCCCccccchh---h---hc------cCCCCccccCChHHHccCCCCchhhHHHHHHH-------HHHH
Confidence 9988 7999999998632210 0 00 01123456999999988888999999999987 5666
Q ss_pred hc-ccc
Q 000399 390 LA-GRR 394 (1566)
Q Consensus 390 ~a-grs 394 (1566)
++ |+.
T Consensus 205 ~~~g~~ 210 (270)
T cd05047 205 VSLGGT 210 (270)
T ss_pred HcCCCC
Confidence 64 543
No 442
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.82 E-value=1.4e-21 Score=227.17 Aligned_cols=196 Identities=20% Similarity=0.230 Sum_probs=159.4
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGL 243 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~ 243 (1566)
|++.+.||+|++|.||+|.+. .++..+++|.+............+. +|+.+|+.++||||++++++
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~~ 66 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDK------LTGEIVAIKKIKLRFESEGIPKTAL--------REIKLLKELNHPNIIKLLDV 66 (283)
T ss_pred CccceeeecCCCceEEEEEcC------CCCcEEEEEEeccccccchhHHHHH--------HHHHHHHHhcCCCcchHHHh
Confidence 678899999999999998863 4688899999876433322222333 58999999999999999999
Q ss_pred ccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcC
Q 000399 244 LKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKP 323 (1566)
Q Consensus 244 ~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFG 323 (1566)
+..++..++||||++++|.+++... ...+++..++.++.|++.||.|||+++|+|+||||+||+++.++ .+||+|||
T Consensus 67 ~~~~~~~~~v~e~~~~~l~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~--~~~l~df~ 143 (283)
T cd05118 67 FRHKGDLYLVFEFMDTDLYKLIKDR-QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEG--VLKLADFG 143 (283)
T ss_pred hccCCCEEEEEeccCCCHHHHHHhh-cccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCC--cEEEeeee
Confidence 9999999999999999998888743 24678889999999999999999999999999999999999988 79999999
Q ss_pred CCCccccccccCCCCCCceeeeecCCccccccccccccccc-chhhccccccccccCCchhhhHHHhhcccc
Q 000399 324 LVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 324 lA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
.+........ ......++..|+|||.+.+. .++...|.|+.|++ .+..++|+.
T Consensus 144 ~~~~~~~~~~-----------~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~-------l~~l~tg~~ 197 (283)
T cd05118 144 LARSFGSPVR-----------PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCI-------FAELLSRRP 197 (283)
T ss_pred eeEecCCCcc-----------cccCccCcccccCcHHHhcCCCCCchhHHHHHHHH-------HHHHHhCCC
Confidence 9875542110 01112467789999998766 67889999999987 677777764
No 443
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.82 E-value=1.9e-21 Score=223.71 Aligned_cols=198 Identities=16% Similarity=0.127 Sum_probs=151.7
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccc---ccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKA---SGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~---~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
+|.+.+.||+|+||.||++++. ..+..+++|.++.... ......++. +|+.+++.++||||++
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~ 66 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDK------KAVAEERLKVLKEIPVGELNPNETVQAN--------QEAQLLSKLDHPAIVK 66 (260)
T ss_pred CceeeeeecCCCCceEEEEEec------CCCCcceEEEeccccccccCcchHHHHH--------HHHHHHHhCCCCcHHH
Confidence 5889999999999999988753 2234455555443221 111111122 5888999999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhcc--CcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQF--SPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~--~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
+++++.+....++||||+++ +|.+++.. .....+++..++.++.|++.||.|||++|++|+||||+||+++.+ .
T Consensus 67 ~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~~---~ 143 (260)
T cd08222 67 FHASFLERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKNN---L 143 (260)
T ss_pred HHHHHhcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeecC---C
Confidence 99999999999999999997 99988863 223457888999999999999999999999999999999999864 4
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+||+|||+++....... ......+++.|+|||.+.+..++...|.|+.|++ .+..++|+.+
T Consensus 144 ~~l~d~g~~~~~~~~~~-----------~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~-------~~~l~~~~~~ 204 (260)
T cd08222 144 LKIGDFGVSRLLMGSCD-----------LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCI-------LYEMCCLAHA 204 (260)
T ss_pred EeecccCceeecCCCcc-----------cccCCCCCcCccCHHHHccCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 99999999876432110 0112236778999999888888889999999987 5666666643
No 444
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.82 E-value=1.2e-21 Score=224.77 Aligned_cols=198 Identities=16% Similarity=0.159 Sum_probs=154.7
Q ss_pred eeecchhhHHHHHhhhccCCcchhhccccceeeecccccc-cccchhhhcCCCCCCCCCCCCcccCCCcccccccccccC
Q 000399 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ-ESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSG 248 (1566)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~-~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~ 248 (1566)
||+|+||.||++++. .++..+|+|.+.......+ ....+. +|+++++.++||||+++++.+.+..
T Consensus 1 lg~g~~~~vy~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~--------~e~~~l~~~~h~~i~~~~~~~~~~~ 66 (265)
T cd05579 1 ISKGAYGRVFLAKKK------STGDIYAIKVIKKADMIRKNQVDQVL--------TERDILSQAQSPYVVKLYYSFQGKK 66 (265)
T ss_pred CCCCCceEEEEEEEC------CCCCEEEEEEecchhhhhhhHHHHHH--------HHHHHHHhCCCcchhHHHHheecCc
Confidence 689999999998863 4588999999876433221 122222 5899999999999999999999999
Q ss_pred ceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCc
Q 000399 249 LITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGF 327 (1566)
Q Consensus 249 ~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~ 327 (1566)
..|+||||+++ +|.+++.. .+.+++..+..++.||+.||.|||++|++||||+|+||+++.++ .+||+|||++..
T Consensus 67 ~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~--~~~l~dfg~~~~ 142 (265)
T cd05579 67 NLYLVMEYLPGGDLASLLEN--VGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNG--HLKLTDFGLSKV 142 (265)
T ss_pred EEEEEEecCCCCcHHHHHHH--cCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCC--CEEEEecccchh
Confidence 99999999986 99999974 23678889999999999999999999999999999999999998 799999999885
Q ss_pred cccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 328 NSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
......... ...........++..|++||.+....++...|+|+.|++ .+..++|+..
T Consensus 143 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~-------~~~l~~g~~p 200 (265)
T cd05579 143 GLVRRQINL---NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCI-------LYEFLVGIPP 200 (265)
T ss_pred cccCccccc---ccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHH-------HHHHHhCCCC
Confidence 432111000 000001122347788999999988778889999999987 5666677654
No 445
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.82 E-value=2e-21 Score=226.25 Aligned_cols=195 Identities=19% Similarity=0.174 Sum_probs=156.1
Q ss_pred cccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCcccccc
Q 000399 164 LFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAPVLG 242 (1566)
Q Consensus 164 y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~l~~ 242 (1566)
|++.+.||+|+||+||+|... .++..+|||.+...... ....... +|+..+++++ ||||+++++
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~------~~~~~~~ik~~~~~~~~-~~~~~~~--------~e~~~l~~~~~h~~i~~~~~ 65 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNK------ETGELVAIKKMKKKFYS-WEECMNL--------REVKSLRKLNEHPNIVKLKE 65 (283)
T ss_pred CeeheeeccCCceEEEEEEEC------CCCcEEEEEEehhhccc-hhHHHHH--------HHHHHHHhccCCCCchhHHH
Confidence 678899999999999998852 35788999988654221 1111112 5888889998 999999999
Q ss_pred cccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCc
Q 000399 243 LLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDK 322 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DF 322 (1566)
++..++..|+||||++++|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++.++ .++|+||
T Consensus 66 ~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~--~~~l~d~ 143 (283)
T cd07830 66 VFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPE--VVKIADF 143 (283)
T ss_pred HhhcCCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCC--CEEEeec
Confidence 99999999999999988999988754334678889999999999999999999999999999999999988 7999999
Q ss_pred CCCCccccccccCCCCCCceeeeecCCccccccccccccc-ccchhhccccccccccCCchhhhHHHhhcccc
Q 000399 323 PLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 323 GlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~-~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|+++....... .....++..|+|||++. ...++..+|.|+.|++ .+..++|+.
T Consensus 144 ~~~~~~~~~~~------------~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~-------l~el~~g~~ 197 (283)
T cd07830 144 GLAREIRSRPP------------YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCI-------MAELYTLRP 197 (283)
T ss_pred ccceeccCCCC------------cCCCCCcccccCceeeecCcCcCCccchhhHHHH-------HHHHHhCCC
Confidence 99985432100 11234788899999874 4456789999999987 666766654
No 446
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.81 E-value=3.8e-20 Score=204.56 Aligned_cols=250 Identities=14% Similarity=0.201 Sum_probs=186.2
Q ss_pred hccccCCCceeccCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcce--EEEeeccCCCccc
Q 000399 1277 SNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDEC--TVFTAGIGPGFKG 1353 (1566)
Q Consensus 1277 ~~~~~H~~~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~--~LaSgS~~~~~D~ 1353 (1566)
.....|.+.+.++.-+|.| +||||.|.+|+|||+... .+..+..|.+.|+++.|.++-. .|+||+. ||
T Consensus 37 F~~~aH~~sitavAVs~~~-----~aSGssDetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sd----DG 107 (362)
T KOG0294|consen 37 FAFSAHAGSITALAVSGPY-----VASGSSDETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSD----DG 107 (362)
T ss_pred ccccccccceeEEEeccee-----EeccCCCCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecC----CC
Confidence 4466789999888888998 999999999999999876 7788889999999999998754 8999998 99
Q ss_pred ceeeEEecccccccccccccccccceEEeecCCcee--eccCcEEEeecCCCcEEEEeecccccccccCCCCCcccc---
Q 000399 1354 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISK--- 1428 (1566)
Q Consensus 1354 tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~La--SgDgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~--- 1428 (1566)
.|.+|+..+.+++.++++|.+.|+.|+++|+++... ++|+.+++||+-+|+....+.-........-.+.+..+.
T Consensus 108 ~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~ 187 (362)
T KOG0294|consen 108 HIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSG 187 (362)
T ss_pred cEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEe
Confidence 999999999999999999999999999999999763 459999999999998766554332221111112222111
Q ss_pred ------cccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchh
Q 000399 1429 ------INTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1502 (1566)
Q Consensus 1429 ------~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~ 1502 (1566)
+..+...+.........+.++.|. ++..+++|+.|+.|++||..++.+...+.+| ..
T Consensus 188 ~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l-----------~~~~L~vG~d~~~i~~~D~ds~~~~~~~~AH------~~ 250 (362)
T KOG0294|consen 188 RNKIDIYQLDNASVFREIENPKRILCATFL-----------DGSELLVGGDNEWISLKDTDSDTPLTEFLAH------EN 250 (362)
T ss_pred ccEEEEEecccHhHhhhhhccccceeeeec-----------CCceEEEecCCceEEEeccCCCccceeeecc------hh
Confidence 111111111111122334454443 3679999999999999999999999999877 55
Q ss_pred hHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccC-----ceeEEeeccCceeeEeee
Q 000399 1503 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG-----NVIASWRAHDGYVTKVRI 1562 (1566)
Q Consensus 1503 ~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sg-----k~l~~l~gH~~~V~~Vaf 1562 (1566)
+|.++.+-. .|++.+|+|+|+||.|++||++.. +.+..+.. ...++|+..
T Consensus 251 RVK~i~~~~---------~~~~~~lvTaSSDG~I~vWd~~~~~k~~~~~l~e~n~-~~RltCl~~ 305 (362)
T KOG0294|consen 251 RVKDIASYT---------NPEHEYLVTASSDGFIKVWDIDMETKKRPTLLAELNT-NVRLTCLRV 305 (362)
T ss_pred heeeeEEEe---------cCCceEEEEeccCceEEEEEccccccCCcceeEEeec-CCccceeee
Confidence 667776431 256679999999999999999876 34544443 445666654
No 447
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.81 E-value=2.3e-21 Score=226.80 Aligned_cols=201 Identities=16% Similarity=0.132 Sum_probs=157.1
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc--cccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ--ESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~--~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
+|++.+.||+|+||.||++++. +...++..+|||.+.+...... ....+. +|+.++..+ +||||++
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~---~~~~~~~~~avk~~~~~~~~~~~~~~~~~~--------~E~~~l~~~~~~~~i~~ 69 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKV---GGHDAGKLYAMKVLKKATIVQKAKTAEHTR--------TERQVLEAVRRCPFLVT 69 (288)
T ss_pred CceEEEEeccCCCceEEEEEEe---ccccCCcEEEEEEEehHHHHhhhhHHHHHH--------HHHHHHHhccCCcchhh
Confidence 4788999999999999987642 2234678899999875432211 112222 589999999 5999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++.+......|+||||+++ +|.+++.. ...+++..++.++.|++.||.|||+.|++||||||+||+++.++ .++
T Consensus 70 ~~~~~~~~~~~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~--~~~ 145 (288)
T cd05583 70 LHYAFQTDTKLHLILDYVNGGELFTHLYQ--REHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEG--HVV 145 (288)
T ss_pred hheeeecCCEEEEEEecCCCCcHHHHHhh--cCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCC--CEE
Confidence 99999999999999999986 99998873 34578888999999999999999999999999999999999988 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc--hhhccccccccccCCchhhhHHHhhccccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD--WHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~--y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
|+|||+++........ ......++..|+|||.+.+.. .+...|+|+.|.+ .+..+.|+.+
T Consensus 146 l~dfg~~~~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~i-------l~el~tg~~p 207 (288)
T cd05583 146 LTDFGLSKEFLAEEEE----------RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVL-------TFELLTGASP 207 (288)
T ss_pred EEECcccccccccccc----------ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHH-------HHHHHhCCCC
Confidence 9999998754321000 011223778899999987654 6778999999987 5666677653
No 448
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.81 E-value=7.6e-20 Score=201.22 Aligned_cols=216 Identities=14% Similarity=0.272 Sum_probs=180.4
Q ss_pred ehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEec-ccccccccccccccccceEEeecCCceeec--cCcEE
Q 000399 1320 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELT-RINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLH 1396 (1566)
Q Consensus 1320 l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~-tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIk 1396 (1566)
+-.+.||++.|+.+.|+|+|..|+|||. |..|.+|++. ..+...+++||.++|..+.|.+++..++|| |.+|+
T Consensus 40 ~m~l~gh~geI~~~~F~P~gs~~aSgG~----Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~ 115 (338)
T KOG0265|consen 40 IMLLPGHKGEIYTIKFHPDGSCFASGGS----DRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVR 115 (338)
T ss_pred hhhcCCCcceEEEEEECCCCCeEeecCC----cceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEE
Confidence 4456799999999999999999999997 9999999963 456677889999999999999999999887 99999
Q ss_pred EeecCCCcEEEEeeccccc------------ccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhc
Q 000399 1397 VWNSQTGKLLSVFAEQSMD------------SLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIEC 1464 (1566)
Q Consensus 1397 LWDl~tg~~l~~l~~h~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pd 1464 (1566)
.||+++|++++.+++|..- .+++++.+....+|+.+.............++++.|...
T Consensus 116 ~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~kyqltAv~f~d~---------- 185 (338)
T KOG0265|consen 116 GWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFENKYQLTAVGFKDT---------- 185 (338)
T ss_pred EEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccccceeEEEEEeccc----------
Confidence 9999999999998887543 345566677778888877777766666778888888876
Q ss_pred cceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeecc-
Q 000399 1465 VERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS- 1543 (1566)
Q Consensus 1465 g~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~s- 1543 (1566)
+..+.+|+-|+.|++||++.+..+++++||.+ .|+.+.. +++|.++.+=+-|+++++||++.
T Consensus 186 s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~D------tIt~lsl-----------s~~gs~llsnsMd~tvrvwd~rp~ 248 (338)
T KOG0265|consen 186 SDQVISGGIDNDIKVWDLRKNDGLYTLSGHAD------TITGLSL-----------SRYGSFLLSNSMDNTVRVWDVRPF 248 (338)
T ss_pred ccceeeccccCceeeeccccCcceEEeecccC------ceeeEEe-----------ccCCCccccccccceEEEEEeccc
Confidence 88999999999999999999999999998844 4444444 56778899999999999999983
Q ss_pred ---CceeEEeeccCce----eeEeeeeccC
Q 000399 1544 ---GNVIASWRAHDGY----VTKVRIISKR 1566 (1566)
Q Consensus 1544 ---gk~l~~l~gH~~~----V~~VafspdG 1566 (1566)
..++..+.||... ...++|+|++
T Consensus 249 ~p~~R~v~if~g~~hnfeknlL~cswsp~~ 278 (338)
T KOG0265|consen 249 APSQRCVKIFQGHIHNFEKNLLKCSWSPNG 278 (338)
T ss_pred CCCCceEEEeecchhhhhhhcceeeccCCC
Confidence 3458888876653 4678899875
No 449
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.81 E-value=2.6e-21 Score=229.33 Aligned_cols=196 Identities=15% Similarity=0.146 Sum_probs=157.0
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccccc-ccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASG-QESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~-~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
...|...+.||+|+||.||+|++. .++..+|+|.+....... ....++. +|+++++.++||||++
T Consensus 14 ~~~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~~--------~e~~~l~~l~h~~i~~ 79 (308)
T cd06634 14 EKLFSDLREIGHGSFGAVYFARDV------RNSEVVAIKKMSYSGKQSNEKWQDII--------KEVRFLQKLRHPNTIQ 79 (308)
T ss_pred HHHHHHHHheeeCCCEEEEEEEEc------CCCcEEEEEEEecccccChHHHHHHH--------HHHHHHHhCCCCCccc
Confidence 346888999999999999998863 467889999886432221 2222333 5999999999999999
Q ss_pred ccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
+++++......++||||+.++|.+++... ...+++..++.++.|++.||.|||+++++||||||+||+++.++ .+||
T Consensus 80 ~~~~~~~~~~~~lv~e~~~~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~--~~kl 156 (308)
T cd06634 80 YRGCYLREHTAWLVMEYCLGSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPG--LVKL 156 (308)
T ss_pred EEEEEEcCCeeEEEEEccCCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCC--cEEE
Confidence 99999999999999999999888877532 34578888999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCccccccccccccc---ccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ---SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~---~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||++...... ....+++.|+|||.+. ...++..+|+|+.|++ .+..+.|+.+
T Consensus 157 ~dfg~~~~~~~~---------------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~i-------l~el~~g~~p 213 (308)
T cd06634 157 GDFGSASIMAPA---------------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT-------CIELAERKPP 213 (308)
T ss_pred CCcccceeecCc---------------ccccCCccccCHHHHhhcccCCCCcccchHHHHHH-------HHHHHcCCCC
Confidence 999998753310 1123778899999874 3456778999999987 5566677753
No 450
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.81 E-value=3.8e-21 Score=219.25 Aligned_cols=199 Identities=16% Similarity=0.162 Sum_probs=162.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|.+.+.||+|++|.||+|.+. .++..+++|++............+. +|+.++++++||||+++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~------~~~~~~~ik~~~~~~~~~~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 66 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDK------DTGELMAVKSVELSGDSEEELEALE--------REIRILSSLQHPNIVRYYG 66 (260)
T ss_pred CceeeeEeeecCceEEEEEEEC------CCCcEEEEEEeeccccchHHHHHHH--------HHHHHHHHcCCCCEeeEEE
Confidence 4788899999999999998863 4688999999876543323333333 5999999999999999999
Q ss_pred ccccc--CceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 243 LLKTS--GLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 243 ~~~~~--~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
.+... ...++||||+++ +|.+++... ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++ .+||
T Consensus 67 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~--~~~l 142 (260)
T cd06606 67 SERDEEKNTLNIFLEYVSGGSLSSLLKKF--GKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDG--VVKL 142 (260)
T ss_pred EEecCCCCeEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCC--CEEE
Confidence 99888 899999999976 999999743 3678889999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||.+......... .......++..|++||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 143 ~d~~~~~~~~~~~~~---------~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~i-------l~~l~~g~~p 202 (260)
T cd06606 143 ADFGCAKRLGDIETG---------EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCT-------VIEMATGKPP 202 (260)
T ss_pred cccccEEeccccccc---------ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 999998865531110 00112347788999999988888889999999987 6777777654
No 451
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.81 E-value=3.6e-20 Score=203.18 Aligned_cols=219 Identities=16% Similarity=0.329 Sum_probs=178.2
Q ss_pred cccCCCceeccCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceee
Q 000399 1279 LMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQK 1357 (1566)
Q Consensus 1279 ~~~H~~~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrl 1357 (1566)
+..|.+-||.++.+... .+++++|.|.+.+||.++++ |+.++.||.++|++++|++.+.+++|+|. |++-.|
T Consensus 144 ~~GHkDGiW~Vaa~~tq---pi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSG----D~taHI 216 (481)
T KOG0300|consen 144 LEGHKDGIWHVAADSTQ---PICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASG----DETAHI 216 (481)
T ss_pred hcccccceeeehhhcCC---cceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccC----CcchHH
Confidence 45699999998776543 25999999999999999987 99999999999999999999999999998 999999
Q ss_pred EEe------cc------------------------------c----ccccccccccccccceEEeecCCceeec--cCcE
Q 000399 1358 WEL------TR------------------------------I----NCVSGYYGHEEVVNDICVLSSSGRIASC--DGTL 1395 (1566)
Q Consensus 1358 WDl------~t------------------------------g----~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtI 1395 (1566)
|.. .+ | -++..++||.+.|.+..|...|+.++++ |.+.
T Consensus 217 W~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTA 296 (481)
T KOG0300|consen 217 WKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTA 296 (481)
T ss_pred HHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccc
Confidence 983 10 0 1245578999999999999999998765 9999
Q ss_pred EEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCc
Q 000399 1396 HVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNG 1475 (1566)
Q Consensus 1396 kLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~Dg 1475 (1566)
.+||+++|.++..+.+|.....+ ++-+|. .+++++.|.|.
T Consensus 297 nlwDVEtge~v~~LtGHd~ELtH------------------------------cstHpt----------QrLVvTsSrDt 336 (481)
T KOG0300|consen 297 NLWDVETGEVVNILTGHDSELTH------------------------------CSTHPT----------QRLVVTSSRDT 336 (481)
T ss_pred eeeeeccCceeccccCcchhccc------------------------------cccCCc----------ceEEEEeccCc
Confidence 99999999999999888554222 233443 78999999999
Q ss_pred eEEEEEccCC-ceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccC-ceeEEeecc
Q 000399 1476 SLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG-NVIASWRAH 1553 (1566)
Q Consensus 1476 tIrlWDi~tg-~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sg-k~l~~l~gH 1553 (1566)
+.|+||++.. ..+..|+|| +..|+++.|.-++ .+++||+|.+|++||+++. ..+++++ -
T Consensus 337 TFRLWDFReaI~sV~VFQGH------tdtVTS~vF~~dd------------~vVSgSDDrTvKvWdLrNMRsplATIR-t 397 (481)
T KOG0300|consen 337 TFRLWDFREAIQSVAVFQGH------TDTVTSVVFNTDD------------RVVSGSDDRTVKVWDLRNMRSPLATIR-T 397 (481)
T ss_pred eeEeccchhhcceeeeeccc------ccceeEEEEecCC------------ceeecCCCceEEEeeeccccCcceeee-c
Confidence 9999999954 567788877 5566777776443 6899999999999999975 4677776 4
Q ss_pred CceeeEeeee
Q 000399 1554 DGYVTKVRII 1563 (1566)
Q Consensus 1554 ~~~V~~Vafs 1563 (1566)
+++++.|+.+
T Consensus 398 dS~~NRvavs 407 (481)
T KOG0300|consen 398 DSPANRVAVS 407 (481)
T ss_pred CCccceeEee
Confidence 6677776665
No 452
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.81 E-value=3.5e-20 Score=203.27 Aligned_cols=239 Identities=13% Similarity=0.170 Sum_probs=188.6
Q ss_pred HHHHHHhhccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eeh--hhhhccCcceeeeecCcceEEEe
Q 000399 1270 VERQEATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILS--SIRAHHGALRSVAVGQDECTVFT 1344 (1566)
Q Consensus 1270 ~~~~~~~~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~--tl~gH~~~V~slafspd~~~LaS 1344 (1566)
..+|..-++...|.+.|.+ |+|.... |++||.|++|++||+... ..+ ....-...|+++.|+|.|.+++.
T Consensus 159 qa~hPvIRTlYDH~devn~l~FHPre~I-----LiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllv 233 (430)
T KOG0640|consen 159 QARHPVIRTLYDHVDEVNDLDFHPRETI-----LISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLV 233 (430)
T ss_pred ccCCceEeehhhccCcccceeecchhhe-----EEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEE
Confidence 3344455677889999998 9999988 999999999999998743 222 22234679999999999999999
Q ss_pred eccCCCcccceeeEEeccccccccc---ccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeeccccccccc
Q 000399 1345 AGIGPGFKGTVQKWELTRINCVSGY---YGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHG 1419 (1566)
Q Consensus 1345 gS~~~~~D~tVrlWDl~tg~~i~tl---~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~ 1419 (1566)
|.. ..++++||++|-+|...- .+|++.|++|.+++.++..+++ ||.|+|||--+++|+.++...++
T Consensus 234 gTd----Hp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~----- 304 (430)
T KOG0640|consen 234 GTD----HPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHG----- 304 (430)
T ss_pred ecC----CCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcC-----
Confidence 987 889999999998886443 6799999999999999988766 99999999999999998865321
Q ss_pred CCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccC
Q 000399 1420 GSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELG 1499 (1566)
Q Consensus 1420 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~ 1499 (1566)
+..|++..|..+ |+++++.+.|.++++|.+.+|+++.++.|.... +
T Consensus 305 -----------------------gsevcSa~Ftkn----------~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~t-g 350 (430)
T KOG0640|consen 305 -----------------------GSEVCSAVFTKN----------GKYILSSGKDSTVKLWEISTGRMLKEYTGAGTT-G 350 (430)
T ss_pred -----------------------CceeeeEEEccC----------CeEEeecCCcceeeeeeecCCceEEEEecCCcc-c
Confidence 356888888887 999999999999999999999999999987432 1
Q ss_pred chhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEee-ccCceeeEeeeeccC
Q 000399 1500 FPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWR-AHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1500 ~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~-gH~~~V~~VafspdG 1566 (1566)
....-+...|+....+ .|.---..+.++-||.|++..+..|. ||++.++.+..||.+
T Consensus 351 rq~~rtqAvFNhtEdy----------Vl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~ 408 (430)
T KOG0640|consen 351 RQKHRTQAVFNHTEDY----------VLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVE 408 (430)
T ss_pred chhhhhhhhhcCccce----------EEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCC
Confidence 1222233334433322 22222345779999999999888875 899999999999864
No 453
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.81 E-value=1.2e-19 Score=196.51 Aligned_cols=211 Identities=20% Similarity=0.243 Sum_probs=170.1
Q ss_pred hhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEee
Q 000399 1322 SIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWN 1399 (1566)
Q Consensus 1322 tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWD 1399 (1566)
.++||+.+++.+.++.+|.+|+|+++ |.++.||-..+|+.+.+|.||++.|+|++...+.+.+++| |.+++|||
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaK----D~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWD 80 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAK----DSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWD 80 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecC----CCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEE
Confidence 46799999999999999999999999 9999999999999999999999999999999999999877 99999999
Q ss_pred cCCCcEEEEeecccccccccCCCCCcccccccCC-----------------------CCCCCCcccccccccccccchhH
Q 000399 1400 SQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQ-----------------------VGMLNSNTLSSGILSTAFDGNLY 1456 (1566)
Q Consensus 1400 l~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~V~svafsp~~~ 1456 (1566)
+.+|+++.++........+..+.+++..++..+. .....+..+.+.+.++.|+|.
T Consensus 81 v~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l-- 158 (327)
T KOG0643|consen 81 VETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPL-- 158 (327)
T ss_pred cCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeeccc--
Confidence 9999999988765444333333444333332111 112233344566666667665
Q ss_pred HHhhhhhccceEEEEecCceEEEEEccCCceeee-eccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCc
Q 000399 1457 TCLHHIECVERLVVGIGNGSLRFIDINQGQKLHL-WRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQ 1535 (1566)
Q Consensus 1457 t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~-~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~ 1535 (1566)
++++++|..||.|..||+++|+.+.. -+. |+..|+.++++ +|..++++||.|.+
T Consensus 159 --------~~~ii~Ghe~G~is~~da~~g~~~v~s~~~------h~~~Ind~q~s-----------~d~T~FiT~s~Dtt 213 (327)
T KOG0643|consen 159 --------GETIIAGHEDGSISIYDARTGKELVDSDEE------HSSKINDLQFS-----------RDRTYFITGSKDTT 213 (327)
T ss_pred --------CCEEEEecCCCcEEEEEcccCceeeechhh------hcccccccccc-----------CCcceEEecccCcc
Confidence 99999999999999999999865533 333 45567777765 55578999999999
Q ss_pred eeEEeeccCceeEEeeccCceeeEeeeec
Q 000399 1536 CRLFDVRSGNVIASWRAHDGYVTKVRIIS 1564 (1566)
Q Consensus 1536 I~lWD~~sgk~l~~l~gH~~~V~~Vafsp 1564 (1566)
.++||+++-++++++. .+.+|++.+++|
T Consensus 214 akl~D~~tl~v~Kty~-te~PvN~aaisP 241 (327)
T KOG0643|consen 214 AKLVDVRTLEVLKTYT-TERPVNTAAISP 241 (327)
T ss_pred ceeeeccceeeEEEee-ecccccceeccc
Confidence 9999999999999998 589999999998
No 454
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.81 E-value=4.3e-21 Score=224.71 Aligned_cols=194 Identities=16% Similarity=0.192 Sum_probs=157.3
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
.|...+.||+|++|.||++.+. .++..+++|.+..... .....+. +|+.+++.++||||+++++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~------~~~~~~~iK~~~~~~~--~~~~~~~--------~e~~~l~~~~h~~vv~~~~ 83 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDK------STGRQVAVKKMDLRKQ--QRRELLF--------NEVVIMRDYQHPNIVEMYS 83 (285)
T ss_pred hhhcceEeccCCCeEEEEEEEC------CCCCEEEEEEEeccch--hHHHHHH--------HHHHHHHHcCCCChheEEE
Confidence 4666789999999999988752 4678899998754321 1122233 5899999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++...+..++|+||+++ +|.+++.. ..++...+..++.|++.||.|||++||+||||||+||+++.++ .++|+|
T Consensus 84 ~~~~~~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~--~~~l~d 158 (285)
T cd06648 84 SYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDG--RVKLSD 158 (285)
T ss_pred EEEcCCeEEEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCC--cEEEcc
Confidence 99999999999999987 99999873 4478888899999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||+++..... ... .....|++.|+|||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 159 ~g~~~~~~~~-------~~~----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~-------l~ell~g~~p 214 (285)
T cd06648 159 FGFCAQVSKE-------VPR----RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIM-------VIEMVDGEPP 214 (285)
T ss_pred cccchhhccC-------Ccc----cccccCCccccCHHHhcCCCCCCcccHHHHHHH-------HHHHHhCCCC
Confidence 9988754321 000 012247889999999988888899999999987 6677777653
No 455
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.80 E-value=6.8e-21 Score=220.21 Aligned_cols=185 Identities=17% Similarity=0.147 Sum_probs=144.5
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCc--ccCCCc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGC--LRHPNV 237 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~--l~HpNI 237 (1566)
+..+.++++.||+|.||+||+|+ ..|..||||++... +...+. ||.+|.+. |+|+||
T Consensus 209 iarqI~L~e~IGkGRyGEVwrG~--------wrGe~VAVKiF~sr-----dE~SWf--------rEtEIYqTvmLRHENI 267 (513)
T KOG2052|consen 209 IARQIVLQEIIGKGRFGEVWRGR--------WRGEDVAVKIFSSR-----DERSWF--------RETEIYQTVMLRHENI 267 (513)
T ss_pred hhheeEEEEEecCccccceeecc--------ccCCceEEEEeccc-----chhhhh--------hHHHHHHHHHhccchh
Confidence 34478899999999999999988 46899999997642 233344 57777655 499999
Q ss_pred ccccccccccC----ceeeeccCCc-cchhhhhccCcccccchhHHHHHHHHHHHHHHHHhh--------ccccCCCccC
Q 000399 238 APVLGLLKTSG----LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS--------LGIAHRSVCP 304 (1566)
Q Consensus 238 V~l~~~~~~~~----~l~LV~E~~~-gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~--------~gIiHrDLKp 304 (1566)
+.++++-..+. .+|||.+|-+ |+|+|+|.. ..++......++..++.||.|||. -.|.|||||.
T Consensus 268 LgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r---~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKS 344 (513)
T KOG2052|consen 268 LGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNR---NTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKS 344 (513)
T ss_pred hhhhhccccCCCceEEEEEeeecccCCcHHHHHhh---ccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccccc
Confidence 99999876553 8999999999 599999983 557888889999999999999996 3599999999
Q ss_pred CCccccccchhhhhhcCcCCCCccccc-cccCCCCCCceeeeecCCcccccccccccccccc----hhh--ccccccccc
Q 000399 305 SNVLLTDSCWSWLYICDKPLVGFNSIA-DWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD----WHS--QFNRWWRGE 377 (1566)
Q Consensus 305 ~NILl~~~~~~~vKL~DFGlA~~~~~~-~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~----y~~--~~d~Ws~G~ 377 (1566)
.|||+..++ ..-|+|+|||-..... ........+ -+||-.|||||++...- +++ ..|+|+.|-
T Consensus 345 KNILVKkn~--~C~IADLGLAv~h~~~t~~idi~~N~--------rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgL 414 (513)
T KOG2052|consen 345 KNILVKKNG--TCCIADLGLAVRHDSDTDTIDIPPNP--------RVGTKRYMAPEVLDETINMKHFESYKRADIYAFGL 414 (513)
T ss_pred ccEEEccCC--cEEEeeceeeEEecccCCcccCCCCC--------ccceeeccChHHhhhhcChhhhhhhhHHHHHHHHH
Confidence 999999999 7999999999754322 122222233 35999999999996432 222 567888885
Q ss_pred c
Q 000399 378 L 378 (1566)
Q Consensus 378 i 378 (1566)
+
T Consensus 415 V 415 (513)
T KOG2052|consen 415 V 415 (513)
T ss_pred H
Confidence 4
No 456
>PTZ00421 coronin; Provisional
Probab=99.80 E-value=1.4e-19 Score=225.35 Aligned_cols=206 Identities=19% Similarity=0.207 Sum_probs=154.9
Q ss_pred cccccCccCCCCceEeee----------ee----hhhhhccCcceeeeecC-cceEEEeeccCCCcccceeeEEeccc--
Q 000399 1301 LGRVGGLKDESPWKIKAS----------IL----SSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKWELTRI-- 1363 (1566)
Q Consensus 1301 LaSgS~D~~I~vWdl~~~----------~l----~tl~gH~~~V~slafsp-d~~~LaSgS~~~~~D~tVrlWDl~tg-- 1363 (1566)
+++++.+..+..|+..++ .+ ..+.||.+.|++++|+| |+.+|+|||. |++|++||+.++
T Consensus 35 ~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~----DgtIkIWdi~~~~~ 110 (493)
T PTZ00421 35 TIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASE----DGTIMGWGIPEEGL 110 (493)
T ss_pred cEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeC----CCEEEEEecCCCcc
Confidence 667666666677765433 11 13679999999999999 8899999998 999999999765
Q ss_pred -----ccccccccccccccceEEeecC-Cceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCC
Q 000399 1364 -----NCVSGYYGHEEVVNDICVLSSS-GRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVG 1435 (1566)
Q Consensus 1364 -----~~i~tl~gH~~~V~sVafsp~g-~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~ 1435 (1566)
+++.++.+|...|.+|+|+|++ ..++|+ |++|+|||+++++.+..+.+|
T Consensus 111 ~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~~~~l~~h----------------------- 167 (493)
T PTZ00421 111 TQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKAVEVIKCH----------------------- 167 (493)
T ss_pred ccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeEEEEEcCC-----------------------
Confidence 3567789999999999999986 467765 999999999999888777654
Q ss_pred CCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcc
Q 000399 1436 MLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKM 1515 (1566)
Q Consensus 1436 ~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~ 1515 (1566)
...|.+++|+|+ |+.+++|+.|++|++||+++++.+.++.+|.... +..+.+.
T Consensus 168 -------~~~V~sla~spd----------G~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~-----~~~~~w~----- 220 (493)
T PTZ00421 168 -------SDQITSLEWNLD----------GSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAK-----SQRCLWA----- 220 (493)
T ss_pred -------CCceEEEEEECC----------CCEEEEecCCCEEEEEECCCCcEEEEEecCCCCc-----ceEEEEc-----
Confidence 456888999886 8999999999999999999999999888774321 1122333
Q ss_pred cCCCcccchhHHHhc----cCCCceeEEeeccCc-eeEEeeccC-ceeeEeeeeccC
Q 000399 1516 QAGGAVASPSWIAAG----LSSGQCRLFDVRSGN-VIASWRAHD-GYVTKVRIISKR 1566 (1566)
Q Consensus 1516 ~~~~~spdg~~LaSG----s~Dg~I~lWD~~sgk-~l~~l~gH~-~~V~~VafspdG 1566 (1566)
+++..|+++ +.|+.|++||+++.. .+.....+. ..+....|++++
T Consensus 221 ------~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~ 271 (493)
T PTZ00421 221 ------KRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDT 271 (493)
T ss_pred ------CCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCC
Confidence 333345443 458999999999764 444444333 345555676664
No 457
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.80 E-value=4.9e-21 Score=225.32 Aligned_cols=198 Identities=17% Similarity=0.180 Sum_probs=155.2
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~ 239 (1566)
.++|++.+.||+|+||.||+|.++ .++..+|||.+.+.... ....+++ +|+.++.+. .||||++
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~------~~~~~~avK~~~~~~~~-~~~~~~~--------~e~~~~~~~~~~~~i~~ 78 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFK------KTGHVMAVKQMRRTGNK-EENKRIL--------MDLDVVLKSHDCPYIVK 78 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEEC------CCCeEEEEEEEeccCCh-HHHHHHH--------HHHHHHHhccCCCchHh
Confidence 568999999999999999998863 35888999998754322 1222333 366555555 5999999
Q ss_pred ccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccchhhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~~~~vK 318 (1566)
+++++.+...+|+||||++++|.+++... ...+++..+..++.|++.||.|||+ .||+||||||+||+++.++ .+|
T Consensus 79 ~~~~~~~~~~~~~v~e~~~~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~--~~k 155 (296)
T cd06618 79 CYGYFITDSDVFICMELMSTCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASG--NVK 155 (296)
T ss_pred hheeeecCCeEEEEeeccCcCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCC--CEE
Confidence 99999999999999999998888777642 3367888888999999999999997 6999999999999999888 799
Q ss_pred hcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc----hhhccccccccccCCchhhhHHHhhcccc
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD----WHSQFNRWWRGELSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~----y~~~~d~Ws~G~isnfeyL~~ln~~agrs 394 (1566)
|+|||+++....... .....++..|+|||.+.+.. ++...|+|+.|++ .+..++|+.
T Consensus 156 L~dfg~~~~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~i-------l~el~~g~~ 216 (296)
T cd06618 156 LCDFGISGRLVDSKA------------KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGIS-------LVELATGQF 216 (296)
T ss_pred ECccccchhccCCCc------------ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHH-------HHHHHhCCC
Confidence 999999875432100 01113677899999987553 7778999999987 677777876
Q ss_pred c
Q 000399 395 W 395 (1566)
Q Consensus 395 ~ 395 (1566)
+
T Consensus 217 p 217 (296)
T cd06618 217 P 217 (296)
T ss_pred C
Confidence 5
No 458
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.80 E-value=4.4e-21 Score=232.99 Aligned_cols=207 Identities=18% Similarity=0.173 Sum_probs=167.8
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
..+..++||.|+||+||+|.. +.+ ...-+.+||||++... ...+...+++ +|+-+|.+++|||+++|++
T Consensus 697 elkk~kvLGsgAfGtV~kGiw-~Pe-ge~vKipVaiKvl~~~-t~~~~s~e~L--------deAl~masldHpnl~RLLg 765 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIW-IPE-GENVKIPVAIKVLIEF-TSPKASIELL--------DEALRMASLDHPNLLRLLG 765 (1177)
T ss_pred hhhhhceeccccceeEEeeeE-ecC-CceecceeEEEEeecc-CCchhhHHHH--------HHHHHHhcCCCchHHHHhh
Confidence 566789999999999999874 222 2344678999998764 4445566677 4999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
++..+. +.||++|+++ +|.++++.. +..+-......|.+||++||.|||+++++||||..+|+|+.... ++||+|
T Consensus 766 vc~~s~-~qlvtq~mP~G~LlDyvr~h-r~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~--hvkitd 841 (1177)
T KOG1025|consen 766 VCMLST-LQLVTQLMPLGCLLDYVREH-RDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPN--HVKITD 841 (1177)
T ss_pred hcccch-HHHHHHhcccchHHHHHHHh-hccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCC--eEEEEe
Confidence 998876 8899999995 999999964 44577888899999999999999999999999999999999988 899999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhcccccCCc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWGDY 398 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~~dl 398 (1566)
||+|+......+.-....- ...+-|||-|.+....|+.+.|+|+.|+- ++.+-+|..+++..+
T Consensus 842 fgla~ll~~d~~ey~~~~g---------K~pikwmale~i~~~~~thqSDVWsfGVt-----iWElmTFGa~Py~gi 904 (1177)
T KOG1025|consen 842 FGLAKLLAPDEKEYSAPGG---------KVPIKWMALESIRIRKYTHQSDVWSFGVT-----IWELMTFGAKPYDGI 904 (1177)
T ss_pred cchhhccCccccccccccc---------ccCcHHHHHHHhhccCCCchhhhhhhhhh-----HHHHHhcCCCccCCC
Confidence 9999976643221111111 13455899999999999999999999986 778888888876543
No 459
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.80 E-value=4.3e-21 Score=224.36 Aligned_cols=197 Identities=13% Similarity=0.150 Sum_probs=161.3
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.+.|+..+.||+|+||.||+|.+. .++..+++|.+..... ....+. +|+++++.++||||+++
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~------~~~~~~~iK~~~~~~~---~~~~~~--------~e~~~l~~l~~~~i~~~ 80 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDR------ATGKEVAIKKMRLRKQ---NKELII--------NEILIMKDCKHPNIVDY 80 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEc------cCCcEEEEEEEecCch---hHHHHH--------HHHHHHHHCCCCCeeEE
Confidence 457999999999999999988863 3578899999875432 223333 58999999999999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhh
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL 319 (1566)
++.+...+..|+|+||+++ +|.+++.... ..++...+..++.|++.||.|||+.||+|+||||+||+++.++ .++|
T Consensus 81 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~--~~~l 157 (286)
T cd06614 81 YDSYLVGDELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDG--SVKL 157 (286)
T ss_pred EEEEEECCEEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCC--CEEE
Confidence 9999999999999999996 9999998432 2678888999999999999999999999999999999999988 7999
Q ss_pred cCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 320 CDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 320 ~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
+|||++........ . .....++..|++||++.+..++...|.|+.|++ .+..+.|+.+
T Consensus 158 ~d~~~~~~~~~~~~------~-----~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvi-------l~~l~~g~~p 215 (286)
T cd06614 158 ADFGFAAQLTKEKS------K-----RNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIM-------CIEMAEGEPP 215 (286)
T ss_pred Cccchhhhhccchh------h-----hccccCCcccCCHhHhcCCCCCCccccHHHHHH-------HHHHHhCCCC
Confidence 99999864332100 0 011236778999999988888999999999988 6666777653
No 460
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.80 E-value=3.8e-20 Score=230.80 Aligned_cols=197 Identities=17% Similarity=0.321 Sum_probs=172.3
Q ss_pred cccccCccCCCCceEeee-eehh-hhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccccccccccccccc
Q 000399 1301 LGRVGGLKDESPWKIKAS-ILSS-IRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1378 (1566)
Q Consensus 1301 LaSgS~D~~I~vWdl~~~-~l~t-l~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~s 1378 (1566)
+.+++.|+++++||..++ .+.+ +.||.+.|.++++..-+.++++||. |+|++|||..+|+|..++.||.+.|.+
T Consensus 221 ~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~----D~t~rvWd~~sg~C~~~l~gh~stv~~ 296 (537)
T KOG0274|consen 221 FKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGST----DKTERVWDCSTGECTHSLQGHTSSVRC 296 (537)
T ss_pred EEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEec----CCcEEeEecCCCcEEEEecCCCceEEE
Confidence 899999999999998876 5555 9999999999999888889999998 999999999999999999999999998
Q ss_pred eEEeecCCceee--ccCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchhH
Q 000399 1379 ICVLSSSGRIAS--CDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLY 1456 (1566)
Q Consensus 1379 Vafsp~g~~LaS--gDgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~ 1456 (1566)
+.. ....++| .|.+|++||+.+++++.++.+| ...|+++..+
T Consensus 297 ~~~--~~~~~~sgs~D~tVkVW~v~n~~~l~l~~~h------------------------------~~~V~~v~~~---- 340 (537)
T KOG0274|consen 297 LTI--DPFLLVSGSRDNTVKVWDVTNGACLNLLRGH------------------------------TGPVNCVQLD---- 340 (537)
T ss_pred EEc--cCceEeeccCCceEEEEeccCcceEEEeccc------------------------------cccEEEEEec----
Confidence 864 3445566 4999999999999999988775 4567777776
Q ss_pred HHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCce
Q 000399 1457 TCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQC 1536 (1566)
Q Consensus 1457 t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I 1536 (1566)
+.++++|+.|++|++||+.++++++++.+| +++|.++.+.+. ..+++|+.|+.|
T Consensus 341 --------~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH------~~~V~sl~~~~~------------~~~~Sgs~D~~I 394 (537)
T KOG0274|consen 341 --------EPLLVSGSYDGTVKVWDPRTGKCLKSLSGH------TGRVYSLIVDSE------------NRLLSGSLDTTI 394 (537)
T ss_pred --------CCEEEEEecCceEEEEEhhhceeeeeecCC------cceEEEEEecCc------------ceEEeeeeccce
Confidence 459999999999999999999999999987 567777766432 478999999999
Q ss_pred eEEeeccC-ceeEEeeccCceeeEeeee
Q 000399 1537 RLFDVRSG-NVIASWRAHDGYVTKVRII 1563 (1566)
Q Consensus 1537 ~lWD~~sg-k~l~~l~gH~~~V~~Vafs 1563 (1566)
++||++++ +++.++++|..-|.++.+.
T Consensus 395 kvWdl~~~~~c~~tl~~h~~~v~~l~~~ 422 (537)
T KOG0274|consen 395 KVWDLRTKRKCIHTLQGHTSLVSSLLLR 422 (537)
T ss_pred EeecCCchhhhhhhhcCCcccccccccc
Confidence 99999999 9999999999988777653
No 461
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.80 E-value=5.8e-21 Score=216.80 Aligned_cols=195 Identities=16% Similarity=0.191 Sum_probs=160.8
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
+|+..+.||+|++|.||++.+. .++..+++|++..... ....++. +|+.+++.++||||+++++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~------~~~~~~~~k~~~~~~~--~~~~~~~--------~e~~~l~~l~~~~i~~~~~ 64 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHK------RTGKEVAIKVIKLESK--EKKEKII--------NEIQILKKCKHPNIVKYYG 64 (253)
T ss_pred CceeeeeeccCCceEEEEEEEC------CCCcEEEEEEecccch--hHHHHHH--------HHHHHHHhCCCCCEeEEEE
Confidence 4788999999999999998853 3678899999876432 1222333 5999999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+..+...++++||+++ +|.+++...+ ..+++..+..++.|++.||.+||++|++||||+|+||+++.++ .++|+|
T Consensus 65 ~~~~~~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~--~~~l~d 141 (253)
T cd05122 65 SYLKKDELWIVMEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDG--EVKLID 141 (253)
T ss_pred EEecCCeEEEEEecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCC--eEEEee
Confidence 99999999999999996 9999987432 4578889999999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||.+........ .....++..|++||.+.+..++...|+|+.|++ .+..++|+.+
T Consensus 142 ~~~~~~~~~~~~------------~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~i-------l~~l~~g~~p 196 (253)
T cd05122 142 FGLSAQLSDTKA------------RNTMVGTPYWMAPEVINGKPYDYKADIWSLGIT-------AIELAEGKPP 196 (253)
T ss_pred cccccccccccc------------ccceecCCcccCHHHHcCCCCCccccHHHHHHH-------HHHHHhCCCC
Confidence 999886542110 112347788999999988788889999999987 6667777754
No 462
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.80 E-value=5.4e-21 Score=217.74 Aligned_cols=177 Identities=15% Similarity=0.097 Sum_probs=143.6
Q ss_pred cchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccccCceee
Q 000399 173 CSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGLITS 252 (1566)
Q Consensus 173 G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~~l~L 252 (1566)
|.||.||+++++ .++..+|+|.+.+..... +|...+....||||+++++++...+..|+
T Consensus 4 g~~~~v~~~~~~------~~~~~~~~K~i~~~~~~~---------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~l 62 (237)
T cd05576 4 GVIDKVLLVMDT------RTQQTFILKGLRKSSEYS---------------RERLTIIPHCVPNMVCLHKYIVSEDSVFL 62 (237)
T ss_pred cccceEEEEEEc------cCCcEEEEEeecchhhhh---------------hHHHHHHhcCCCceeehhhheecCCeEEE
Confidence 899999998874 578899999987642111 23333444569999999999999999999
Q ss_pred eccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCccccc
Q 000399 253 VIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFNSIA 331 (1566)
Q Consensus 253 V~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~~~~ 331 (1566)
||||+++ +|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||+++.++ .++++|||.+......
T Consensus 63 v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~--~~~l~df~~~~~~~~~ 138 (237)
T cd05576 63 VLQHAEGGKLWSHISK--FLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRG--HIQLTYFSRWSEVEDS 138 (237)
T ss_pred EEecCCCCCHHHHHHH--hcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCC--CEEEecccchhccccc
Confidence 9999997 99999873 34578889999999999999999999999999999999999998 7999999987643310
Q ss_pred cccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 332 DWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
..+..++..|+|||.+.+..++...|.|+.|++ .+..++|+..
T Consensus 139 --------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~i-------l~el~~g~~~ 181 (237)
T cd05576 139 --------------CDGEAVENMYCAPEVGGISEETEACDWWSLGAI-------LFELLTGKTL 181 (237)
T ss_pred --------------cccCCcCccccCCcccCCCCCCchhhHHHHHHH-------HHHHHHCcch
Confidence 011125667999999988888889999999987 6677778753
No 463
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.80 E-value=1.3e-19 Score=227.49 Aligned_cols=229 Identities=15% Similarity=0.154 Sum_probs=180.3
Q ss_pred cCCCCCCCCCccccccc--CccCCCCceEeee-------------eehhhhhccCcceeeeecCcceEEEeeccCCCccc
Q 000399 1289 PTPAASWDGPDFLGRVG--GLKDESPWKIKAS-------------ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1289 fSpdg~~~~~~~LaSgS--~D~~I~vWdl~~~-------------~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~ 1353 (1566)
.||||.. +|||| .|+.++||+.+.- .+.+...|.+.|+|+.|+|||.+||+||. |+
T Consensus 21 v~pdg~~-----~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSD----D~ 91 (942)
T KOG0973|consen 21 VHPDGVK-----FATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSD----DR 91 (942)
T ss_pred ecCCcee-----EecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccC----cc
Confidence 7999998 99999 9999999997531 34566789999999999999999999998 99
Q ss_pred ceeeEEecc------------------cccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeeccc
Q 000399 1354 TVQKWELTR------------------INCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQS 1413 (1566)
Q Consensus 1354 tVrlWDl~t------------------g~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~ 1413 (1566)
.|.||+... .+++.++.+|...|.+++|+|++.++||+ |++|.|||.++.+.+.++.+|
T Consensus 92 ~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H- 170 (942)
T KOG0973|consen 92 LVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFELLKVLRGH- 170 (942)
T ss_pred eEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEccccceeeeeeecc-
Confidence 999999762 24677889999999999999999999998 999999999999999998886
Q ss_pred ccccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeecc
Q 000399 1414 MDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRG 1493 (1566)
Q Consensus 1414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~ 1493 (1566)
.+.|..+.|+|- |+++++-+.|++|++|++.+....+.+.+
T Consensus 171 -----------------------------~s~VKGvs~DP~----------Gky~ASqsdDrtikvwrt~dw~i~k~It~ 211 (942)
T KOG0973|consen 171 -----------------------------QSLVKGVSWDPI----------GKYFASQSDDRTLKVWRTSDWGIEKSITK 211 (942)
T ss_pred -----------------------------cccccceEECCc----------cCeeeeecCCceEEEEEcccceeeEeecc
Confidence 455778899988 99999999999999999876555444444
Q ss_pred CCc----------------------------------------------ccCchhhHHHhhccCCCc--ccCCCcccchh
Q 000399 1494 EPT----------------------------------------------ELGFPSLVSAICACGSEK--MQAGGAVASPS 1525 (1566)
Q Consensus 1494 h~~----------------------------------------------~v~~~~~V~sv~~s~~~~--~~~~~~spdg~ 1525 (1566)
+-. .++|..++.++.|+|.-- -...|.+..+.
T Consensus 212 pf~~~~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~lfe~~~~ng~~~~~~ 291 (942)
T KOG0973|consen 212 PFEESPLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPKLFERNNKNGTSTQPN 291 (942)
T ss_pred chhhCCCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChHHhccccccCCccCCC
Confidence 332 334444444444443210 00011222222
Q ss_pred ----HHHhccCCCceeEEeeccCceeEEee-ccCceeeEeeeeccC
Q 000399 1526 ----WIAAGLSSGQCRLFDVRSGNVIASWR-AHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1526 ----~LaSGs~Dg~I~lWD~~sgk~l~~l~-gH~~~V~~VafspdG 1566 (1566)
.+|+||.|+.|.||.+..-+++.... --+..|..++|+|||
T Consensus 292 ~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG 337 (942)
T KOG0973|consen 292 CYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDG 337 (942)
T ss_pred cceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCC
Confidence 68999999999999998888776653 245789999999998
No 464
>PTZ00420 coronin; Provisional
Probab=99.80 E-value=1.4e-19 Score=226.41 Aligned_cols=193 Identities=11% Similarity=0.086 Sum_probs=152.6
Q ss_pred ccccCccCCCCceEeee-eehhhhhccCcceeeeecCc-ceEEEeeccCCCcccceeeEEecccc--------ccccccc
Q 000399 1302 GRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQD-ECTVFTAGIGPGFKGTVQKWELTRIN--------CVSGYYG 1371 (1566)
Q Consensus 1302 aSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd-~~~LaSgS~~~~~D~tVrlWDl~tg~--------~i~tl~g 1371 (1566)
..||.++.+++|+.... .+..+.+|.+.|.+++|+|+ +.+|+|||. |++|+|||+.++. ++.++.+
T Consensus 48 ~gGG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~----DgtIrIWDi~t~~~~~~~i~~p~~~L~g 123 (568)
T PTZ00420 48 EGGGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSE----DLTIRVWEIPHNDESVKEIKDPQCILKG 123 (568)
T ss_pred CCCCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeC----CCeEEEEECCCCCccccccccceEEeec
Confidence 45777889999987654 67788999999999999996 789999998 9999999997642 3446789
Q ss_pred ccccccceEEeecCCce-eec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCccccccccc
Q 000399 1372 HEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILS 1448 (1566)
Q Consensus 1372 H~~~V~sVafsp~g~~L-aSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~s 1448 (1566)
|...|.+|+|+|++..+ +|+ |++|+|||+++++.+..+.. ...|.+
T Consensus 124 H~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~-------------------------------~~~V~S 172 (568)
T PTZ00420 124 HKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINM-------------------------------PKKLSS 172 (568)
T ss_pred CCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEec-------------------------------CCcEEE
Confidence 99999999999998865 554 99999999999987765531 234778
Q ss_pred ccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHH
Q 000399 1449 TAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIA 1528 (1566)
Q Consensus 1449 vafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~La 1528 (1566)
++|+|+ |.+|++++.|++|++||+++++.+.++.+|.+.+ .+.++ ...++++++.+|+
T Consensus 173 lswspd----------G~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~------~s~~v------~~~~fs~d~~~Il 230 (568)
T PTZ00420 173 LKWNIK----------GNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGK------NTKNI------WIDGLGGDDNYIL 230 (568)
T ss_pred EEECCC----------CCEEEEEecCCEEEEEECCCCcEEEEEecccCCc------eeEEE------EeeeEcCCCCEEE
Confidence 888876 8999999999999999999999999998885421 11111 1224457777888
Q ss_pred hccCCC----ceeEEeecc-CceeEEee
Q 000399 1529 AGLSSG----QCRLFDVRS-GNVIASWR 1551 (1566)
Q Consensus 1529 SGs~Dg----~I~lWD~~s-gk~l~~l~ 1551 (1566)
|++.|+ .|+|||+++ ++++..+.
T Consensus 231 TtG~d~~~~R~VkLWDlr~~~~pl~~~~ 258 (568)
T PTZ00420 231 STGFSKNNMREMKLWDLKNTTSALVTMS 258 (568)
T ss_pred EEEcCCCCccEEEEEECCCCCCceEEEE
Confidence 877664 799999995 66776654
No 465
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.79 E-value=5.3e-21 Score=225.07 Aligned_cols=194 Identities=17% Similarity=0.175 Sum_probs=155.0
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLG 242 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~ 242 (1566)
.|+....||+|+||.||++..+ .++..+|+|.+.... ......+. +|+.+++.++||||+++++
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~~~------~~~~~v~iK~~~~~~--~~~~~~~~--------~e~~~l~~l~h~~iv~~~~ 84 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIATVK------SSGKLVAVKKMDLRK--QQRRELLF--------NEVVIMRDYQHENVVEMYN 84 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEEEc------CCCeEEEEEEecccc--hhHHHHHH--------HHHHHHHhcCCcchhheee
Confidence 4555678999999999987753 578899999875422 12222333 5899999999999999999
Q ss_pred cccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcC
Q 000399 243 LLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICD 321 (1566)
Q Consensus 243 ~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~D 321 (1566)
.+...+..|+||||+++ +|.+++.. ..+++..++.++.|++.||.|||++|++||||||+||+++.++ .++|+|
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~--~~~l~d 159 (292)
T cd06657 85 SYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDG--RVKLSD 159 (292)
T ss_pred EEEeCCEEEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCC--CEEEcc
Confidence 99999999999999997 89888752 3467888899999999999999999999999999999999988 799999
Q ss_pred cCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 322 KPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 322 FGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
||++....... .. .....+++.|++||.+.+..++...|.|+.|++ .+..++|..+
T Consensus 160 fg~~~~~~~~~----~~-------~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvi-------l~el~tg~~p 215 (292)
T cd06657 160 FGFCAQVSKEV----PR-------RKSLVGTPYWMAPELISRLPYGPEVDIWSLGIM-------VIEMVDGEPP 215 (292)
T ss_pred cccceeccccc----cc-------ccccccCccccCHHHhcCCCCCchhhHHHHHHH-------HHHHHhCCCC
Confidence 99987543110 00 012247888999999988788889999999987 5666667553
No 466
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.79 E-value=1.4e-19 Score=210.02 Aligned_cols=216 Identities=15% Similarity=0.229 Sum_probs=176.5
Q ss_pred CCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecC-cceEEEeeccCCCcccceeeE
Q 000399 1283 EPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKW 1358 (1566)
Q Consensus 1283 ~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafsp-d~~~LaSgS~~~~~D~tVrlW 1358 (1566)
.+-|++ |-.||.+ ++.|+..|.|+|||.++. .++.+.+|+.+|..+.|+| |++.+++||. |+.+++|
T Consensus 68 k~~v~s~~fR~DG~L-----laaGD~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sD----d~v~k~~ 138 (487)
T KOG0310|consen 68 KDVVYSVDFRSDGRL-----LAAGDESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSD----DKVVKYW 138 (487)
T ss_pred ccceeEEEeecCCeE-----EEccCCcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCC----CceEEEE
Confidence 344544 8899998 999999999999997765 7889999999999999999 5667777876 9999999
Q ss_pred EecccccccccccccccccceEEeecCCce-eec--cCcEEEeecCCC-cEEEEeecccccccccCCCCCcccccccCCC
Q 000399 1359 ELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTG-KLLSVFAEQSMDSLHGGSPSSSISKINTDQV 1434 (1566)
Q Consensus 1359 Dl~tg~~i~tl~gH~~~V~sVafsp~g~~L-aSg--DgtIkLWDl~tg-~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~ 1434 (1566)
|+.+...+..+.+|++.|.|.+|+|....+ +|| ||+||+||.++. ..+.++.
T Consensus 139 d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR~~~~~v~eln------------------------ 194 (487)
T KOG0310|consen 139 DLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTRSLTSRVVELN------------------------ 194 (487)
T ss_pred EcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEeccCCceeEEec------------------------
Confidence 999988766889999999999999998855 777 999999999976 4554443
Q ss_pred CCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCc
Q 000399 1435 GMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEK 1514 (1566)
Q Consensus 1435 ~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~ 1514 (1566)
|+.+|.++.|-|. |..+++++. ..|++||+-+|..+..-.. .|.-.|+|+++..+
T Consensus 195 -------hg~pVe~vl~lps----------gs~iasAgG-n~vkVWDl~~G~qll~~~~-----~H~KtVTcL~l~s~-- 249 (487)
T KOG0310|consen 195 -------HGCPVESVLALPS----------GSLIASAGG-NSVKVWDLTTGGQLLTSMF-----NHNKTVTCLRLASD-- 249 (487)
T ss_pred -------CCCceeeEEEcCC----------CCEEEEcCC-CeEEEEEecCCceehhhhh-----cccceEEEEEeecC--
Confidence 3556777777665 788888876 6799999997655433322 14556788888643
Q ss_pred ccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1515 MQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1515 ~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
+..|+|||-|+.|++||+.+-+.+..|. -.++|.+++.+||+
T Consensus 250 ---------~~rLlS~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd 291 (487)
T KOG0310|consen 250 ---------STRLLSGSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDD 291 (487)
T ss_pred ---------CceEeecccccceEEEEccceEEEEeee-cccceeeEEecCCC
Confidence 3689999999999999999999999998 57999999999964
No 467
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.79 E-value=1.3e-19 Score=196.88 Aligned_cols=230 Identities=13% Similarity=0.192 Sum_probs=174.7
Q ss_pred cCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee---eehhhhhccCcceeeeecCcceEEEeeccCCCcccce
Q 000399 1281 KCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTV 1355 (1566)
Q Consensus 1281 ~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~---~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tV 1355 (1566)
.|+-.|++ +||.|++ |++||.|.++.||.-..+ ++.++.||.+.|.|++|+++|.+|||+|. |+.|
T Consensus 59 ~hkrsVRsvAwsp~g~~-----La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSR----DKSV 129 (312)
T KOG0645|consen 59 GHKRSVRSVAWSPHGRY-----LASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSR----DKSV 129 (312)
T ss_pred cchheeeeeeecCCCcE-----EEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeC----CCeE
Confidence 47777887 7999999 999999999999986654 88999999999999999999999999998 9999
Q ss_pred eeEEeccc---ccccccccccccccceEEeecCCceeec--cCcEEEeecC---CCcEEEEeecccccccccCCCCCccc
Q 000399 1356 QKWELTRI---NCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQ---TGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1566)
Q Consensus 1356 rlWDl~tg---~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~---tg~~l~~l~~h~~~~~~~~~~~~~~~ 1427 (1566)
-||.+..+ +|+..+++|+..|..+.|+|....|+|| |.+||+|+-. .-.+++++.+|...+-...+.+....
T Consensus 130 WiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~~G~r 209 (312)
T KOG0645|consen 130 WIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDNIGSR 209 (312)
T ss_pred EEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecCCCce
Confidence 99999744 7889999999999999999999999988 9999999877 23688999988754333332222222
Q ss_pred ccccCCCCCCCC--------cccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCc--eeeeeccCCcc
Q 000399 1428 KINTDQVGMLNS--------NTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQ--KLHLWRGEPTE 1497 (1566)
Q Consensus 1428 ~~~~~~~~~~~~--------~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~--~l~~~~~h~~~ 1497 (1566)
+........+.+ ..|+..+..++|. + ..+++|+.|+.|+++--..+- ....+-.+ ..
T Consensus 210 l~s~sdD~tv~Iw~~~~~~~~~~sr~~Y~v~W~-~-----------~~IaS~ggD~~i~lf~~s~~~d~p~~~l~~~-~~ 276 (312)
T KOG0645|consen 210 LVSCSDDGTVSIWRLYTDLSGMHSRALYDVPWD-N-----------GVIASGGGDDAIRLFKESDSPDEPSWNLLAK-KE 276 (312)
T ss_pred EEEecCCcceEeeeeccCcchhcccceEeeeec-c-----------cceEeccCCCEEEEEEecCCCCCchHHHHHh-hh
Confidence 222222222222 2366778888887 3 389999999999999766431 11111111 01
Q ss_pred cCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeec
Q 000399 1498 LGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR 1542 (1566)
Q Consensus 1498 v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~ 1542 (1566)
..|..-|++|+++|.. ...|++|++||.|++|.+.
T Consensus 277 ~aHe~dVNsV~w~p~~----------~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 277 GAHEVDVNSVQWNPKV----------SNRLASGGDDGIVNFWELE 311 (312)
T ss_pred cccccccceEEEcCCC----------CCceeecCCCceEEEEEec
Confidence 1356678889988732 2489999999999999864
No 468
>KOG1786 consensus Lysosomal trafficking regulator LYST and related BEACH and WD40 repeat proteins [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.79 E-value=2.2e-20 Score=247.48 Aligned_cols=185 Identities=32% Similarity=0.501 Sum_probs=148.2
Q ss_pred hhccccccccccCCchhhhHHHhhcccccCCccceeecceeE-eeccC-CCCCCCcccccccccccccccCCcceeeee-
Q 000399 367 HSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGDEQLDFTY- 443 (1566)
Q Consensus 367 ~~~~d~Ws~G~isnfeyL~~ln~~agrs~~dl~q~pv~pwv~-d~~~~-~~~~~~~~~rdLskp~~~l~~~~~~~~~~~- 443 (1566)
...+..|..|.++||+|++.+|.++||+++|+.|||||||++ ||..+ .++.+..+||++++|+++. .+.+...+
T Consensus 873 ~a~~~~~~~~~~~n~~y~~~~~~~agrs~nd~~q~~v~~~~~ad~~~k~~~l~~~~~~~~~~r~~a~~---~~~~~~~~~ 949 (1081)
T KOG1786|consen 873 LAITNTWEEGLISNFEYLTMLNLLAGRSFNDWMQYPVFPWVLADYVSKVLDLQDLLIYRDLSRPIAVQ---KEKLEEHHS 949 (1081)
T ss_pred hhhhhhhccccccchHHHHHHHHhhcCcHHHhhcCcceEEEecccceeeEeeeccccccccccchhHH---HHHHhhhhh
Confidence 346789999999999999999999999999999999999999 88776 4788889999999999822 11111111
Q ss_pred --ecCCCCccccHhhhhhhccccccccccchhHHHHhhhhc--cCCCCCchhhhhhh-------ccCCCCccCccccCcc
Q 000399 444 --SSSEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRSV--YEPNEYPSTMQRLY-------QWTPDECIPEFYCDPQ 512 (1566)
Q Consensus 444 --~~~~~~~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~~--~~~~~~~~~~~~~~-------~~~~~EliPEff~~p~ 512 (1566)
..-.-|+||+++|++.+.|.+|++|+.||+..+...+.. ..|.+-+.+..+-+ ..+++|||| |||.||
T Consensus 950 ~~~e~~~~~~~~~~~s~~~~~~~~~~r~~p~~~~~~~~~~~~~~~~dr~f~~l~~~~~~~~~~s~td~kel~p-~f~~pe 1028 (1081)
T KOG1786|consen 950 WESEDTEPYHYGSHYSNSGTVSHFLIRLPPFTEMFLSLQDGRFDFPDRLFHSLETAWSLASIESSTDVKELIP-FFYLPE 1028 (1081)
T ss_pred hhhhccCCccccccccCccccccccccCCchHHHHHHhccCcCCCcccccccccccccccccccccchhhccc-cccCcc
Confidence 112368999999999999999999999999988765532 22333222222221 136799999 999999
Q ss_pred hhhccC----------CCCcccccCCCCCChHHHHHHhhhhhcccccceeeeeeEE
Q 000399 513 IFYSQH----------PGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWID 558 (1566)
Q Consensus 513 ~~~~~~----------~~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WID 558 (1566)
++.|-+ ++++||.+ -.+++.||++||.||||+||+.++|+|||
T Consensus 1029 ~l~n~~~~d~g~~qn~~~~~~~~~---~~~~~~~i~~hr~al~s~~v~~~~~~~i~ 1081 (1081)
T KOG1786|consen 1029 FLRNRNGFDFGERQNGERVNDVVL---RGDPRSFILIHRQALESEYVSSNLHTWID 1081 (1081)
T ss_pred eeecCCccccCcccCCCcccceee---ccchHHHHHHHHHhhhcccccccceeccC
Confidence 999753 56899999 67999999999999999999999999998
No 469
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.79 E-value=6.9e-21 Score=220.26 Aligned_cols=203 Identities=15% Similarity=0.156 Sum_probs=156.5
Q ss_pred ccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccc----cccchhhhcCCCCCCCCCCCCc-ccCCCc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQ----ESKNFLRLIGVPSFDESSVPGC-LRHPNV 237 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~----~~~~~l~~~g~~~~rEi~iL~~-l~HpNI 237 (1566)
.|++.+.||+|+||.||+|.+.. ..+..+|+|.+........ .....+. ..++|+.++.+ ++||||
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~-----~~~~~~avk~~~~~~~~~~~~~~~~~~~~~----~~~~e~~~l~~~~~h~~i 71 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKN-----NGQNLLALKEINVHNPAFGKDKRERDKSIG----DIVSEVTIIKEQLRHPNI 71 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcC-----CCCceeeeeEeeccccccccccccchHHHH----HHHHHHHHHhhcCCCCCe
Confidence 48889999999999999988631 2467899998764322111 0001111 11257777754 799999
Q ss_pred ccccccccccCceeeeccCCcc-chhhhhccC--cccccchhHHHHHHHHHHHHHHHHhh-ccccCCCccCCCccccccc
Q 000399 238 APVLGLLKTSGLITSVIPKTPY-TLENILQFS--PNALKSEWHVRFLMYQLLSAIAYLHS-LGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 238 V~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~--~~~~l~~~~~~~i~~Qil~aL~yLH~-~gIiHrDLKp~NILl~~~~ 313 (1566)
+++++++..++..++||||+++ +|.+++... ....+++..++.++.|++.||.|||+ .+|+||||||+||+++.++
T Consensus 72 ~~~~~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~ 151 (269)
T cd08528 72 VRYYKTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDD 151 (269)
T ss_pred eeEEeeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCC
Confidence 9999999999999999999997 998887532 23457888899999999999999996 7899999999999999998
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccc
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
.+||+|||++....... ......++..|++||.+.+..++...|+|+.|++ .+..+.|+
T Consensus 152 --~~~l~dfg~~~~~~~~~------------~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~l-------l~~l~~g~ 210 (269)
T cd08528 152 --KVTITDFGLAKQKQPES------------KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCI-------LYQMCTLQ 210 (269)
T ss_pred --cEEEecccceeeccccc------------ccccccCcccCcChhhhcCCCCchHHHHHHHHHH-------HHHHHhCC
Confidence 79999999998543210 0122347888999999988888899999999987 66677776
Q ss_pred cc
Q 000399 394 RW 395 (1566)
Q Consensus 394 s~ 395 (1566)
.+
T Consensus 211 ~p 212 (269)
T cd08528 211 PP 212 (269)
T ss_pred Cc
Confidence 54
No 470
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.79 E-value=2.7e-20 Score=199.41 Aligned_cols=231 Identities=15% Similarity=0.180 Sum_probs=191.4
Q ss_pred cccCCCceec-----cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcc
Q 000399 1279 LMKCEPWFWF-----PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFK 1352 (1566)
Q Consensus 1279 ~~~H~~~V~~-----fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D 1352 (1566)
.+.|+-.|.. ..|+|++ |++++.|+.=.+-+-+++ -+.+|.||.+.|++.....+-...+|++. |
T Consensus 10 c~ghtrpvvdl~~s~itp~g~f-----lisa~kd~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaa----d 80 (334)
T KOG0278|consen 10 CHGHTRPVVDLAFSPITPDGYF-----LISASKDGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAA----D 80 (334)
T ss_pred EcCCCcceeEEeccCCCCCceE-----EEEeccCCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcc----c
Confidence 4557767665 3668887 999999998887777776 78899999999999999999999999998 9
Q ss_pred cceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCc-EEEEeecccccccccCCCCCccccc
Q 000399 1353 GTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGK-LLSVFAEQSMDSLHGGSPSSSISKI 1429 (1566)
Q Consensus 1353 ~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~-~l~~l~~h~~~~~~~~~~~~~~~~~ 1429 (1566)
=|-+|||.-+|..+.++. |...|.+++|+.+..+|++| +..+||+|+..-+ +...+
T Consensus 81 ftakvw~a~tgdelhsf~-hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~-------------------- 139 (334)
T KOG0278|consen 81 FTAKVWDAVTGDELHSFE-HKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEI-------------------- 139 (334)
T ss_pred chhhhhhhhhhhhhhhhh-hhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhh--------------------
Confidence 999999999999999985 99999999999999999887 8999999987432 22222
Q ss_pred ccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhc
Q 000399 1430 NTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICA 1509 (1566)
Q Consensus 1430 ~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~ 1509 (1566)
.+|+.+|..+.|... .+.+++.+.|++||+||.++|..++++.- +..|+++.+
T Consensus 140 ----------~ghtg~Ir~v~wc~e----------D~~iLSSadd~tVRLWD~rTgt~v~sL~~-------~s~VtSlEv 192 (334)
T KOG0278|consen 140 ----------SGHTGGIRTVLWCHE----------DKCILSSADDKTVRLWDHRTGTEVQSLEF-------NSPVTSLEV 192 (334)
T ss_pred ----------cCCCCcceeEEEecc----------CceEEeeccCCceEEEEeccCcEEEEEec-------CCCCcceee
Confidence 345677777777665 56788889999999999999999888753 445566666
Q ss_pred cCCCccc-----------------------------CCCcccchhHHHhccCCCceeEEeeccCceeEEe-eccCceeeE
Q 000399 1510 CGSEKMQ-----------------------------AGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASW-RAHDGYVTK 1559 (1566)
Q Consensus 1510 s~~~~~~-----------------------------~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l-~gH~~~V~~ 1559 (1566)
++++.+. +...+|+-..+++|+.|..++.||..||+.+..+ ++|-++|.|
T Consensus 193 s~dG~ilTia~gssV~Fwdaksf~~lKs~k~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhc 272 (334)
T KOG0278|consen 193 SQDGRILTIAYGSSVKFWDAKSFGLLKSYKMPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHC 272 (334)
T ss_pred ccCCCEEEEecCceeEEeccccccceeeccCccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEE
Confidence 6554322 2336788889999999999999999999999997 899999999
Q ss_pred eeeeccC
Q 000399 1560 VRIISKR 1566 (1566)
Q Consensus 1560 VafspdG 1566 (1566)
|.|+|||
T Consensus 273 VrFSPdG 279 (334)
T KOG0278|consen 273 VRFSPDG 279 (334)
T ss_pred EEECCCC
Confidence 9999997
No 471
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.79 E-value=9.4e-21 Score=216.14 Aligned_cols=191 Identities=20% Similarity=0.228 Sum_probs=154.3
Q ss_pred eeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccccccccccCc
Q 000399 170 IGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPVLGLLKTSGL 249 (1566)
Q Consensus 170 IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l~~~~~~~~~ 249 (1566)
||+|+||.||++.+. .++..+|+|.+.+.........+... +|+.+++.++||||+++++.+..+..
T Consensus 1 lg~G~~~~v~~~~~~------~~~~~~~~k~~~~~~~~~~~~~~~~~-------~e~~~l~~l~h~~i~~~~~~~~~~~~ 67 (250)
T cd05123 1 LGKGSFGKVLLVRKK------DTGKLYAMKVLKKKKIIKRKEVEHTL-------TERNILSRINHPFIVKLHYAFQTEEK 67 (250)
T ss_pred CCCCCceEEEEEEEC------CCCcEEEEEEeehhhhcchHHHHHHH-------HHHHHHHHcCCCcHHHHHHHeecCCe
Confidence 699999999988752 36789999998875443321222222 58899999999999999999999999
Q ss_pred eeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhhhhhcCcCCCCcc
Q 000399 250 ITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYICDKPLVGFN 328 (1566)
Q Consensus 250 l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~vKL~DFGlA~~~ 328 (1566)
.|+||||+++ +|.+++.. ...+++..+..++.|++.||.|||+++++|+||||+||+++.++ .++|+|||++...
T Consensus 68 ~~~v~e~~~~~~L~~~l~~--~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~--~~~l~d~~~~~~~ 143 (250)
T cd05123 68 LYLVLEYAPGGELFSHLSK--EGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADG--HIKLTDFGLAKEL 143 (250)
T ss_pred eEEEEecCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCC--cEEEeecCcceec
Confidence 9999999965 99999973 33578889999999999999999999999999999999999998 7999999998864
Q ss_pred ccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 329 SIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
..... ......++..|++||...+..++...|.|+.|++ .+..++|+.+
T Consensus 144 ~~~~~-----------~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~-------~~~l~~g~~p 192 (250)
T cd05123 144 SSEGS-----------RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVL-------LYEMLTGKPP 192 (250)
T ss_pred ccCCC-----------cccCCcCCccccChHHhCCCCCCchhhHHHHHHH-------HHHHHHCCCC
Confidence 42110 0122347778999999988888889999999987 5666677654
No 472
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.79 E-value=5.3e-20 Score=213.05 Aligned_cols=227 Identities=14% Similarity=0.136 Sum_probs=171.7
Q ss_pred ccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeeeee-hhhhhccCcceeeeecCcc-eEEEeeccCCCccc
Q 000399 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASIL-SSIRAHHGALRSVAVGQDE-CTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1278 ~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~~l-~tl~gH~~~V~slafspd~-~~LaSgS~~~~~D~ 1353 (1566)
++..|...|.+ |+.+|.. +.|+|.|+.+++||+++|.+ ..+. -...++|+.|+||+ +.|++|+. |+
T Consensus 253 tf~gH~k~Vrd~~~s~~g~~-----fLS~sfD~~lKlwDtETG~~~~~f~-~~~~~~cvkf~pd~~n~fl~G~s----d~ 322 (503)
T KOG0282|consen 253 TFKGHRKPVRDASFNNCGTS-----FLSASFDRFLKLWDTETGQVLSRFH-LDKVPTCVKFHPDNQNIFLVGGS----DK 322 (503)
T ss_pred hhhcchhhhhhhhccccCCe-----eeeeecceeeeeeccccceEEEEEe-cCCCceeeecCCCCCcEEEEecC----CC
Confidence 45668888887 8889987 99999999999999999844 4333 45678999999998 78888887 99
Q ss_pred ceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeeccccc--ccccCCCC------
Q 000399 1354 TVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMD--SLHGGSPS------ 1423 (1566)
Q Consensus 1354 tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~--~~~~~~~~------ 1423 (1566)
.|+.||+++++.+..|..|-+.|++|.|.+.|++++|. |++++||+.+.+-.+.....+... .++...++
T Consensus 323 ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~a 402 (503)
T KOG0282|consen 323 KIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAA 402 (503)
T ss_pred cEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehh
Confidence 99999999999999999999999999999999998766 999999999988766544332211 11222222
Q ss_pred ----CcccccccCCCCC----CCCccc--ccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeecc
Q 000399 1424 ----SSISKINTDQVGM----LNSNTL--SSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRG 1493 (1566)
Q Consensus 1424 ----~~~~~~~~~~~~~----~~~~~~--~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~ 1493 (1566)
+.+.++.....-. -.+.+| .+.-..+.|||+ |++|++|..||.+.+||.++-+.+..++.
T Consensus 403 Qs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpD----------G~~l~SGdsdG~v~~wdwkt~kl~~~lka 472 (503)
T KOG0282|consen 403 QSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPD----------GRTLCSGDSDGKVNFWDWKTTKLVSKLKA 472 (503)
T ss_pred hccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCC----------CCeEEeecCCccEEEeechhhhhhhcccc
Confidence 2222332211110 112223 233445566654 99999999999999999999999999998
Q ss_pred CCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEe
Q 000399 1494 EPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFD 1540 (1566)
Q Consensus 1494 h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD 1540 (1566)
| ...+..+.|+|... ..+|||+.||.|++||
T Consensus 473 h------~~~ci~v~wHP~e~----------Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 473 H------DQPCIGVDWHPVEP----------SKVATCGWDGLIKIWD 503 (503)
T ss_pred C------CcceEEEEecCCCc----------ceeEecccCceeEecC
Confidence 7 45567777777653 4799999999999997
No 473
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.79 E-value=2.9e-19 Score=188.42 Aligned_cols=227 Identities=17% Similarity=0.255 Sum_probs=175.3
Q ss_pred hccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEe------ee----------eehhhhhccCcceeeeecCc
Q 000399 1277 SNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK------AS----------ILSSIRAHHGALRSVAVGQD 1338 (1566)
Q Consensus 1277 ~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~------~~----------~l~tl~gH~~~V~slafspd 1338 (1566)
.+....+-.|++ |+|.|.+ .+.||..++.+|.-.. .+ ..+.-+.|.++|.|++|+|+
T Consensus 26 i~~l~dsqairav~fhp~g~l-----yavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~ 100 (350)
T KOG0641|consen 26 INILEDSQAIRAVAFHPAGGL-----YAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPC 100 (350)
T ss_pred EEEecchhheeeEEecCCCce-----EEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCc
Confidence 333344455665 8999998 8999999998866432 11 11233568999999999999
Q ss_pred ceEEEeeccCCCcccceeeEEeccccccc-----ccccccccccceEEeec----CCceeec---cCcEEEeecCCCcEE
Q 000399 1339 ECTVFTAGIGPGFKGTVQKWELTRINCVS-----GYYGHEEVVNDICVLSS----SGRIASC---DGTLHVWNSQTGKLL 1406 (1566)
Q Consensus 1339 ~~~LaSgS~~~~~D~tVrlWDl~tg~~i~-----tl~gH~~~V~sVafsp~----g~~LaSg---DgtIkLWDl~tg~~l 1406 (1566)
|.+++|||. |++|++-......|.. .+.-|.+.|..++|..+ +..++|+ |..|.+-|-.+|+..
T Consensus 101 geliatgsn----dk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~ 176 (350)
T KOG0641|consen 101 GELIATGSN----DKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGF 176 (350)
T ss_pred cCeEEecCC----CceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcc
Confidence 999999998 9999998776555443 35679999999999643 3345665 888888899999999
Q ss_pred EEeecccccccccCCCCCcccccccCCCCCCCCcccccccccc-cccchhHHHhhhhhccceEEEEecCceEEEEEccCC
Q 000399 1407 SVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILST-AFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG 1485 (1566)
Q Consensus 1407 ~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~sv-afsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg 1485 (1566)
.-+.+|.+. |.++ .|+ |-.+++||.|.+||+||++..
T Consensus 177 ~a~sghtgh------------------------------ilalyswn------------~~m~~sgsqdktirfwdlrv~ 214 (350)
T KOG0641|consen 177 HALSGHTGH------------------------------ILALYSWN------------GAMFASGSQDKTIRFWDLRVN 214 (350)
T ss_pred eeecCCccc------------------------------EEEEEEec------------CcEEEccCCCceEEEEeeecc
Confidence 888877443 3332 232 569999999999999999999
Q ss_pred ceeeeeccCCcccC-chhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeec
Q 000399 1486 QKLHLWRGEPTELG-FPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIIS 1564 (1566)
Q Consensus 1486 ~~l~~~~~h~~~v~-~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafsp 1564 (1566)
.++.++.......+ -++.|.+||++ |.|++|++|-.|..+.+||++-|+.++.+..|...|+||.|+|
T Consensus 215 ~~v~~l~~~~~~~glessavaav~vd-----------psgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp 283 (350)
T KOG0641|consen 215 SCVNTLDNDFHDGGLESSAVAAVAVD-----------PSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSP 283 (350)
T ss_pred ceeeeccCcccCCCcccceeEEEEEC-----------CCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCC
Confidence 99988764422111 13566777766 5668999999999999999999999999999999999999998
Q ss_pred c
Q 000399 1565 K 1565 (1566)
Q Consensus 1565 d 1565 (1566)
.
T Consensus 284 ~ 284 (350)
T KOG0641|consen 284 G 284 (350)
T ss_pred C
Confidence 4
No 474
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.79 E-value=1.9e-19 Score=195.04 Aligned_cols=258 Identities=14% Similarity=0.151 Sum_probs=189.0
Q ss_pred CCCceec--cCCCCCCCCCcccccccCccCCCCceE-eeeeehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeE
Q 000399 1282 CEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKI-KASILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKW 1358 (1566)
Q Consensus 1282 H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl-~~~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlW 1358 (1566)
|+-.+.. ++.+|.+ |.|++.|.++.||-- ++..+.++.||+++|+|+...-+...++|||. |.++++|
T Consensus 9 HERplTqiKyN~eGDL-----lFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSA----D~t~kLW 79 (327)
T KOG0643|consen 9 HERPLTQIKYNREGDL-----LFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSA----DQTAKLW 79 (327)
T ss_pred CccccceEEecCCCcE-----EEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccc----cceeEEE
Confidence 5555544 5777776 999999999999976 45599999999999999999999999999999 9999999
Q ss_pred EecccccccccccccccccceEEeecCCcee-ec------cCcEEEeecC-------CCcEEEEeecccc----------
Q 000399 1359 ELTRINCVSGYYGHEEVVNDICVLSSSGRIA-SC------DGTLHVWNSQ-------TGKLLSVFAEQSM---------- 1414 (1566)
Q Consensus 1359 Dl~tg~~i~tl~gH~~~V~sVafsp~g~~La-Sg------DgtIkLWDl~-------tg~~l~~l~~h~~---------- 1414 (1566)
|+.+|+++.+++ -..+|..+.|+.+|.+++ +. -+.|.++|++ ..++...+..+..
T Consensus 80 Dv~tGk~la~~k-~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l 158 (327)
T KOG0643|consen 80 DVETGKQLATWK-TNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPL 158 (327)
T ss_pred EcCCCcEEEEee-cCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeeccc
Confidence 999999999986 467899999999999874 33 4679999998 3444555443322
Q ss_pred -cccccCCCCCcccccccCCCCC-CC-CcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeee
Q 000399 1415 -DSLHGGSPSSSISKINTDQVGM-LN-SNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLW 1491 (1566)
Q Consensus 1415 -~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~ 1491 (1566)
..+..+..++.+..|+...... +. ...|+..|+.+.++++ ..+++|||.|.+.++||.++-+++.++
T Consensus 159 ~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d----------~T~FiT~s~Dttakl~D~~tl~v~Kty 228 (327)
T KOG0643|consen 159 GETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRD----------RTYFITGSKDTTAKLVDVRTLEVLKTY 228 (327)
T ss_pred CCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCC----------cceEEecccCccceeeeccceeeEEEe
Confidence 2334444555666666654322 22 2457778888887776 889999999999999999999999999
Q ss_pred ccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhcc-CCC--ceeEEeeccCceeEEeeccCceeeEeeeeccC
Q 000399 1492 RGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGL-SSG--QCRLFDVRSGNVIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1492 ~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs-~Dg--~I~lWD~~sgk~l~~l~gH~~~V~~VafspdG 1566 (1566)
... .+|++.+++|-.....++-..+.+=+-+.+ ..| ..|+|++-..+.+..++||-++|++|+|+|||
T Consensus 229 ~te-------~PvN~aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdG 299 (327)
T KOG0643|consen 229 TTE-------RPVNTAAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDG 299 (327)
T ss_pred eec-------ccccceecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCC
Confidence 854 467888887755432221111111111111 111 23455555556788899999999999999997
No 475
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.78 E-value=2.5e-20 Score=254.07 Aligned_cols=188 Identities=16% Similarity=0.155 Sum_probs=152.0
Q ss_pred hhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCccc
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
....|...+.||+|+||.||+|++. .++..||+|.+........ +|+++|++++|||||+
T Consensus 688 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~~vavK~~~~~~~~~~--------------~~~~~l~~l~HpnIv~ 747 (968)
T PLN00113 688 ILSSLKEENVISRGKKGASYKGKSI------KNGMQFVVKEINDVNSIPS--------------SEIADMGKLQHPNIVK 747 (968)
T ss_pred HHhhCCcccEEccCCCeeEEEEEEC------CCCcEEEEEEccCCccccH--------------HHHHHHhhCCCCCcce
Confidence 3456778889999999999998753 4688999998764321111 3677889999999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHh---hccccCCCccCCCccccccchh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLH---SLGIAHRSVCPSNVLLTDSCWS 315 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH---~~gIiHrDLKp~NILl~~~~~~ 315 (1566)
+++++.+.+..|+||||+++ +|.++++. ++...+..++.|++.||+||| +.+|+||||||+||+++.++
T Consensus 748 ~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~-----l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~-- 820 (968)
T PLN00113 748 LIGLCRSEKGAYLIHEYIEGKNLSEVLRN-----LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKD-- 820 (968)
T ss_pred EEEEEEcCCCCEEEEeCCCCCcHHHHHhc-----CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCC--
Confidence 99999999999999999996 99999962 567778889999999999999 67999999999999999887
Q ss_pred hhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHhhccccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~~agrs~ 395 (1566)
..++. ||.++.... ...+.+|+.|+|||++.+..|+.+.|+|+.|++ .++.++|+.+
T Consensus 821 ~~~~~-~~~~~~~~~---------------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvv-------l~el~tg~~p 877 (968)
T PLN00113 821 EPHLR-LSLPGLLCT---------------DTKCFISSAYVAPETRETKDITEKSDIYGFGLI-------LIELLTGKSP 877 (968)
T ss_pred ceEEE-ecccccccc---------------CCCccccccccCcccccCCCCCcccchhhHHHH-------HHHHHhCCCC
Confidence 45554 665543221 011247889999999999999999999999988 7888888876
Q ss_pred CC
Q 000399 396 GD 397 (1566)
Q Consensus 396 ~d 397 (1566)
.+
T Consensus 878 ~~ 879 (968)
T PLN00113 878 AD 879 (968)
T ss_pred CC
Confidence 43
No 476
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.78 E-value=3.3e-19 Score=203.58 Aligned_cols=208 Identities=20% Similarity=0.284 Sum_probs=179.3
Q ss_pred ccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccccccccccccccc
Q 000399 1300 FLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1378 (1566)
Q Consensus 1300 ~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~s 1378 (1566)
+++|||.|+.+.++|...+ .+.+++||...|+++.++++...++++|. |..|+||......+......|.++|+.
T Consensus 233 ~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSa----d~~i~vws~~~~s~~~~~~~h~~~V~~ 308 (506)
T KOG0289|consen 233 KILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASA----DEIIRVWSVPLSSEPTSSRPHEEPVTG 308 (506)
T ss_pred cceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCC----cceEEeeccccccCcccccccccccee
Confidence 3999999999999998875 78999999999999999999999999999 999999999988888888999999999
Q ss_pred eEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchhH
Q 000399 1379 ICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLY 1456 (1566)
Q Consensus 1379 Vafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~ 1456 (1566)
+..+|.|.++++. |++..+.|.++|+++....... ..-.+.+.+|||+
T Consensus 309 ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~~~----------------------------s~v~~ts~~fHpD-- 358 (506)
T KOG0289|consen 309 LSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSDET----------------------------SDVEYTSAAFHPD-- 358 (506)
T ss_pred eeeccCCcEEEEecCCceEEEEEccCCcEEEEEeecc----------------------------ccceeEEeeEcCC--
Confidence 9999999999665 9999999999999987665421 0223556677765
Q ss_pred HHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCce
Q 000399 1457 TCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQC 1536 (1566)
Q Consensus 1457 t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I 1536 (1566)
|.++.+|+.||.|+|||+.++..+..|.+| ++.|.+|+|+ .+|-|+|++.+|+.|
T Consensus 359 --------gLifgtgt~d~~vkiwdlks~~~~a~Fpgh------t~~vk~i~Fs-----------ENGY~Lat~add~~V 413 (506)
T KOG0289|consen 359 --------GLIFGTGTPDGVVKIWDLKSQTNVAKFPGH------TGPVKAISFS-----------ENGYWLATAADDGSV 413 (506)
T ss_pred --------ceEEeccCCCceEEEEEcCCccccccCCCC------CCceeEEEec-----------cCceEEEEEecCCeE
Confidence 999999999999999999999999999877 5667777665 667899999999999
Q ss_pred eEEeeccCceeEEeeccC-ceeeEeeeeccC
Q 000399 1537 RLFDVRSGNVIASWRAHD-GYVTKVRIISKR 1566 (1566)
Q Consensus 1537 ~lWD~~sgk~l~~l~gH~-~~V~~VafspdG 1566 (1566)
++||+|.-+...++.-.+ ..|.++.|.+.|
T Consensus 414 ~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SG 444 (506)
T KOG0289|consen 414 KLWDLRKLKNFKTIQLDEKKEVNSLSFDQSG 444 (506)
T ss_pred EEEEehhhcccceeeccccccceeEEEcCCC
Confidence 999999999888886433 358888887765
No 477
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.78 E-value=4e-19 Score=204.84 Aligned_cols=255 Identities=18% Similarity=0.227 Sum_probs=197.9
Q ss_pred ccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeeeee------------------hhh-hhccCcceeeeecCc
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASIL------------------SSI-RAHHGALRSVAVGQD 1338 (1566)
Q Consensus 1280 ~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~~l------------------~tl-~gH~~~V~slafspd 1338 (1566)
..|.-.+.+ ++||+.+ ..++|.|++|.-|++.++.. ..- ++|.+.|.++|.++|
T Consensus 139 ~~H~~s~~~vals~d~~~-----~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~D 213 (479)
T KOG0299|consen 139 GKHQLSVTSVALSPDDKR-----VFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSD 213 (479)
T ss_pred ccccCcceEEEeeccccc-----eeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCC
Confidence 345555555 7999998 99999999999999876521 011 389999999999999
Q ss_pred ceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccc
Q 000399 1339 ECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDS 1416 (1566)
Q Consensus 1339 ~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~ 1416 (1566)
|.+|+||+. |+.|.|||..+.+.+.++++|.+.|.+++|-.....+.|+ |++|++|++.....+.++-+|.+.+
T Consensus 214 gkylatgg~----d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v 289 (479)
T KOG0299|consen 214 GKYLATGGR----DRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGV 289 (479)
T ss_pred CcEEEecCC----CceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccce
Confidence 999999998 9999999999999999999999999999998777766444 9999999999877777777776542
Q ss_pred c-----------ccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCC
Q 000399 1417 L-----------HGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG 1485 (1566)
Q Consensus 1417 ~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg 1485 (1566)
. +.+.-+....+|.........+.++...+.|++|-.+ ..+++||.||.|.+|++.+.
T Consensus 290 ~~IdaL~reR~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~In~-----------~HfvsGSdnG~IaLWs~~KK 358 (479)
T KOG0299|consen 290 LGIDALSRERCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFIND-----------EHFVSGSDNGSIALWSLLKK 358 (479)
T ss_pred eeechhcccceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEecc-----------cceeeccCCceEEEeeeccc
Confidence 2 2222334445555544444555566777888877653 58999999999999999999
Q ss_pred ceeeeeccCCc------ccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccC----ceeEEeeccCc
Q 000399 1486 QKLHLWRGEPT------ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG----NVIASWRAHDG 1555 (1566)
Q Consensus 1486 ~~l~~~~~h~~------~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sg----k~l~~l~gH~~ 1555 (1566)
+++.+.+...+ .++++.||++++.. |...++|+||.||.||+|-+.+| +++..+. -.+
T Consensus 359 kplf~~~~AHgv~~~~~~~~~~~Witsla~i-----------~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~G 426 (479)
T KOG0299|consen 359 KPLFTSRLAHGVIPELDPVNGNFWITSLAVI-----------PGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVG 426 (479)
T ss_pred CceeEeeccccccCCccccccccceeeeEec-----------ccCceEEecCCCCceEEEEecCCccccceeeecc-ccc
Confidence 99988764422 12223377777765 44468999999999999999887 4666666 578
Q ss_pred eeeEeeeeccC
Q 000399 1556 YVTKVRIISKR 1566 (1566)
Q Consensus 1556 ~V~~VafspdG 1566 (1566)
.|++|+|+++|
T Consensus 427 fVNsl~f~~sg 437 (479)
T KOG0299|consen 427 FVNSLAFSNSG 437 (479)
T ss_pred EEEEEEEccCC
Confidence 99999999886
No 478
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.78 E-value=1.1e-20 Score=232.04 Aligned_cols=186 Identities=18% Similarity=0.135 Sum_probs=148.6
Q ss_pred cccceeeeecchhh-HHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCccccc
Q 000399 164 LFPIAFIGICSYSI-FEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPVL 241 (1566)
Q Consensus 164 y~~~~~IG~G~fG~-Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l~ 241 (1566)
|..-+.+|.|+-|+ ||+|. -.++.||||.+-.+.. .+.. ||+..|+.- +|||||++|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~--------ye~R~VAVKrll~e~~------~~A~-------rEi~lL~eSD~H~NviRyy 569 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGV--------YEGREVAVKRLLEEFF------DFAQ-------REIQLLQESDEHPNVIRYY 569 (903)
T ss_pred eccHHHcccCCCCcEEEEEe--------eCCceehHHHHhhHhH------HHHH-------HHHHHHHhccCCCceEEEE
Confidence 44567789999986 77766 4688999999765322 2333 899999888 599999999
Q ss_pred ccccccCceeeeccCCccchhhhhccC-cccc-cchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccc---cchhh
Q 000399 242 GLLKTSGLITSVIPKTPYTLENILQFS-PNAL-KSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTD---SCWSW 316 (1566)
Q Consensus 242 ~~~~~~~~l~LV~E~~~gsL~~~l~~~-~~~~-l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~---~~~~~ 316 (1566)
+.-.++..+||++|.|..+|.+++... .... ......+.++.|++.||++||+.+||||||||.||||+. ++...
T Consensus 570 c~E~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~r 649 (903)
T KOG1027|consen 570 CSEQDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLR 649 (903)
T ss_pred eeccCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCccee
Confidence 999999999999999999999999853 1111 112456889999999999999999999999999999987 34458
Q ss_pred hhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccchhhcccccccccc
Q 000399 317 LYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGEL 378 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~i 378 (1566)
++|+|||+++....... ... ...++.||..|+|||++....-...+|+.+.||+
T Consensus 650 a~iSDfglsKkl~~~~s-------S~~-r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCv 703 (903)
T KOG1027|consen 650 AKISDFGLSKKLAGGKS-------SFS-RLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCV 703 (903)
T ss_pred EEecccccccccCCCcc-------hhh-cccCCCCcccccCHHHHhccccCcccchhhcCce
Confidence 99999999997663211 111 1456789999999999988777789999999999
No 479
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.78 E-value=3e-19 Score=196.23 Aligned_cols=230 Identities=18% Similarity=0.231 Sum_probs=175.0
Q ss_pred HhhccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhh-hccCcceeeeecCcceEEEeeccCCC
Q 000399 1275 ATSNLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIR-AHHGALRSVAVGQDECTVFTAGIGPG 1350 (1566)
Q Consensus 1275 ~~~~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~-gH~~~V~slafspd~~~LaSgS~~~~ 1350 (1566)
+..++.-+.+.|.| ||.|... +|+|+.||.|++|.+.++ |++.|. +|+..|+|+.|+.|+..+.|+|-
T Consensus 255 Aqd~fMMmd~aVlci~FSRDsEM-----lAsGsqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sf--- 326 (508)
T KOG0275|consen 255 AQDNFMMMDDAVLCISFSRDSEM-----LASGSQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASF--- 326 (508)
T ss_pred hhcceeecccceEEEeecccHHH-----hhccCcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccc---
Confidence 34566778899998 8999887 999999999999999987 888885 99999999999999999999986
Q ss_pred cccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeeccccc----ccccCCCCC
Q 000399 1351 FKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMD----SLHGGSPSS 1424 (1566)
Q Consensus 1351 ~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~----~~~~~~~~~ 1424 (1566)
|.+||+.-+.+|+|++.+.||.+.|+...|+++|..++|+ ||+|++|+..+++|+.++...... .+....-+.
T Consensus 327 -D~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnp 405 (508)
T KOG0275|consen 327 -DQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNP 405 (508)
T ss_pred -cceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCC
Confidence 9999999999999999999999999999999999999766 999999999999999998753221 000000111
Q ss_pred cccccccCC---------CCCCCCcc----cccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeee
Q 000399 1425 SISKINTDQ---------VGMLNSNT----LSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLW 1491 (1566)
Q Consensus 1425 ~~~~~~~~~---------~~~~~~~~----~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~ 1491 (1566)
...++.+.. +.++.... ..+...+... +|-|.++.+.+.|+.+.-+...+|+.-+++
T Consensus 406 eh~iVCNrsntv~imn~qGQvVrsfsSGkREgGdFi~~~l----------SpkGewiYcigED~vlYCF~~~sG~LE~tl 475 (508)
T KOG0275|consen 406 EHFIVCNRSNTVYIMNMQGQVVRSFSSGKREGGDFINAIL----------SPKGEWIYCIGEDGVLYCFSVLSGKLERTL 475 (508)
T ss_pred ceEEEEcCCCeEEEEeccceEEeeeccCCccCCceEEEEe----------cCCCcEEEEEccCcEEEEEEeecCceeeee
Confidence 111111111 11111100 1111222233 455999999999999999999999999999
Q ss_pred ccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEe
Q 000399 1492 RGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFD 1540 (1566)
Q Consensus 1492 ~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD 1540 (1566)
..|... |-.++- +|....||+-+.||.+++|.
T Consensus 476 ~VhEkd------vIGl~H-----------HPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 476 PVHEKD------VIGLTH-----------HPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred eccccc------cccccc-----------CcccchhhhhcccchhhhcC
Confidence 887543 233333 35557899999999999995
No 480
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.77 E-value=2e-19 Score=213.71 Aligned_cols=199 Identities=17% Similarity=0.252 Sum_probs=166.7
Q ss_pred ccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee---eehhhhhccCcceeeee-cCcceEEEeeccCCCccc
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS---ILSSIRAHHGALRSVAV-GQDECTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1280 ~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~---~l~tl~gH~~~V~slaf-spd~~~LaSgS~~~~~D~ 1353 (1566)
..|++||.+ .-.+|+. |+|+|.|-+|++|+.... +..+++.|.+-|.|++. .++...+||||- |+
T Consensus 70 e~HsDWVNDiiL~~~~~t-----lIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGL----D~ 140 (735)
T KOG0308|consen 70 EHHSDWVNDIILCGNGKT-----LISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGL----DR 140 (735)
T ss_pred hhhHhHHhhHHhhcCCCc-----eEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCC----Cc
Confidence 349999998 4555665 999999999999998754 88999999999999999 889999999998 99
Q ss_pred ceeeEEecccc--cc--------cccc-cccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccC
Q 000399 1354 TVQKWELTRIN--CV--------SGYY-GHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGG 1420 (1566)
Q Consensus 1354 tVrlWDl~tg~--~i--------~tl~-gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~ 1420 (1566)
.|.|||+.++. .+ ..+. ||..+|++++.++.|..+|+| .+.+++||.++++.+..+.+|.
T Consensus 141 ~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHT------- 213 (735)
T KOG0308|consen 141 KIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHT------- 213 (735)
T ss_pred cEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeeccc-------
Confidence 99999998772 22 2233 899999999999999888887 8999999999999998888874
Q ss_pred CCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCc
Q 000399 1421 SPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGF 1500 (1566)
Q Consensus 1421 ~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~ 1500 (1566)
..|..+..++ ||+.+++||+||+||+||++..+|++++..|...
T Consensus 214 -----------------------dNVr~ll~~d----------DGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~--- 257 (735)
T KOG0308|consen 214 -----------------------DNVRVLLVND----------DGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEG--- 257 (735)
T ss_pred -----------------------cceEEEEEcC----------CCCeEeecCCCceEEeeeccccceeeeEEeccCc---
Confidence 3455555554 4999999999999999999999999999988432
Q ss_pred hhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccC
Q 000399 1501 PSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSG 1544 (1566)
Q Consensus 1501 ~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sg 1544 (1566)
|.++..+ |+...+.+|+.||.|..=|+++-
T Consensus 258 ---VWaL~~~-----------~sf~~vYsG~rd~~i~~Tdl~n~ 287 (735)
T KOG0308|consen 258 ---VWALQSS-----------PSFTHVYSGGRDGNIYRTDLRNP 287 (735)
T ss_pred ---eEEEeeC-----------CCcceEEecCCCCcEEecccCCc
Confidence 4555544 45578999999999999999983
No 481
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.77 E-value=6.5e-19 Score=198.83 Aligned_cols=230 Identities=17% Similarity=0.182 Sum_probs=175.0
Q ss_pred ccccCCCceec---cCCCCCCCCCcccccccCccCCCCceEeee-----eehhhhhccCcceeeeecCcceEEEeeccCC
Q 000399 1278 NLMKCEPWFWF---PTPAASWDGPDFLGRVGGLKDESPWKIKAS-----ILSSIRAHHGALRSVAVGQDECTVFTAGIGP 1349 (1566)
Q Consensus 1278 ~~~~H~~~V~~---fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-----~l~tl~gH~~~V~slafspd~~~LaSgS~~~ 1349 (1566)
...+|++.+.+ ..++..- ..++++|.|.++++|..+.+ .++..+||...|.+|+..++|..++|||.
T Consensus 139 ~~~Ght~~ik~v~~v~~n~~~---~~fvsas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~-- 213 (423)
T KOG0313|consen 139 TIVGHTGPIKSVAWVIKNSSS---CLFVSASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSW-- 213 (423)
T ss_pred EEecCCcceeeeEEEecCCcc---ceEEEecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecc--
Confidence 35567777775 2333321 13999999999999998865 34555699999999999999999999998
Q ss_pred CcccceeeEEec-------------------------ccccccccccccccccceEEeecCCceeec--cCcEEEeecCC
Q 000399 1350 GFKGTVQKWELT-------------------------RINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQT 1402 (1566)
Q Consensus 1350 ~~D~tVrlWDl~-------------------------tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~t 1402 (1566)
|.++++|+.+ +..++-++.||++.|.+|-|++ ...+.|+ |.+|+.||+.+
T Consensus 214 --D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDlet 290 (423)
T KOG0313|consen 214 --DTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLET 290 (423)
T ss_pred --cceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcC-CCceEeecccceEEEEEeec
Confidence 9999999932 1234566899999999999988 4444444 99999999999
Q ss_pred CcEEEEeeccccc----------ccccCCCCCcccccccCCC--CCC--CCcccccccccccccchhHHHhhhhhccceE
Q 000399 1403 GKLLSVFAEQSMD----------SLHGGSPSSSISKINTDQV--GML--NSNTLSSGILSTAFDGNLYTCLHHIECVERL 1468 (1566)
Q Consensus 1403 g~~l~~l~~h~~~----------~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~V~svafsp~~~t~v~~~pdg~~L 1468 (1566)
|+++.++.+.... .+.+++.+..+.+|+.+.. .++ .+.+|.+.|.++.|+|. +-..|
T Consensus 291 g~~~~~~~~~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~---------~~~~~ 361 (423)
T KOG0313|consen 291 GGLKSTLTTNKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPT---------NEFQL 361 (423)
T ss_pred ccceeeeecCcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheecCCC---------CceEE
Confidence 9988877654332 2233344445566665432 222 35679999999999997 36789
Q ss_pred EEEecCceEEEEEccCCc-eeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeec
Q 000399 1469 VVGIGNGSLRFIDINQGQ-KLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR 1542 (1566)
Q Consensus 1469 ~sgs~DgtIrlWDi~tg~-~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~ 1542 (1566)
++|+.|+++++||+|+.+ .+..+.+| ...|-++.++ .|..|+||+.|++|+++...
T Consensus 362 ~S~S~D~t~klWDvRS~k~plydI~~h------~DKvl~vdW~------------~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 362 VSGSYDNTVKLWDVRSTKAPLYDIAGH------NDKVLSVDWN------------EGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred EEEecCCeEEEEEeccCCCcceeeccC------CceEEEEecc------------CCceEEeccCcceEEEeccc
Confidence 999999999999999987 88888877 4556666665 34589999999999998754
No 482
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.77 E-value=4.7e-20 Score=214.74 Aligned_cols=185 Identities=18% Similarity=0.160 Sum_probs=143.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccCCCcccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
....++.+.||+|.||.||+|.. +++.||||++... ....|.+ -++|--+-.++|+||+++
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL--------~~~~VAVKifp~~-----~kqs~~~------Ek~Iy~lp~m~h~nIl~F 269 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQL--------DNRLVAVKIFPEQ-----EKQSFQN------EKNIYSLPGMKHENILQF 269 (534)
T ss_pred CCchhhHHHhhcCccceeehhhc--------cCceeEEEecCHH-----HHHHHHh------HHHHHhccCccchhHHHh
Confidence 45678899999999999999984 5699999997652 2334443 133444556789999999
Q ss_pred cccccccC----ceeeeccCCc-cchhhhhccCcccccchhHHHHHHHHHHHHHHHHhh---------ccccCCCccCCC
Q 000399 241 LGLLKTSG----LITSVIPKTP-YTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHS---------LGIAHRSVCPSN 306 (1566)
Q Consensus 241 ~~~~~~~~----~l~LV~E~~~-gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~---------~gIiHrDLKp~N 306 (1566)
+++-+... .++||+||.+ |+|.++|+ ...++-.....++.-+++||+|||+ ..|+|||||..|
T Consensus 270 i~~ekr~t~~~~eywLVt~fh~kGsL~dyL~---~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkN 346 (534)
T KOG3653|consen 270 IGAEKRGTADRMEYWLVTEFHPKGSLCDYLK---ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKN 346 (534)
T ss_pred hchhccCCccccceeEEeeeccCCcHHHHHH---hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccc
Confidence 99987655 8999999999 59999998 3346777789999999999999997 469999999999
Q ss_pred ccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCccccccccccccccc-chh-----hcccccccccc
Q 000399 307 VLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWH-----SQFNRWWRGEL 378 (1566)
Q Consensus 307 ILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~-~y~-----~~~d~Ws~G~i 378 (1566)
|||.+++ ..-|+|||+|...... ..... ..+-+||..|||||++.+. .+. ..+|+|+.|-+
T Consensus 347 VLvK~Dl--TccIaDFGLAl~~~p~----~~~~d-----~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLV 413 (534)
T KOG3653|consen 347 VLVKNDL--TCCIADFGLALRLEPG----KPQGD-----THGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLV 413 (534)
T ss_pred eEEccCC--cEEeeccceeEEecCC----CCCcc-----hhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHH
Confidence 9999999 7999999999865521 11111 1224699999999999653 222 36788888854
No 483
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.76 E-value=2.5e-18 Score=195.24 Aligned_cols=216 Identities=19% Similarity=0.316 Sum_probs=169.9
Q ss_pred ehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEE
Q 000399 1320 LSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHV 1397 (1566)
Q Consensus 1320 l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkL 1397 (1566)
+.++++|.+.|++++|+|++.++++++. |+.|++|++.+++....+.+|...+.++.|+++++.++++ ||.|++
T Consensus 2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~----~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i 77 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPDGKLLATGSG----DGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRL 77 (289)
T ss_pred chHhcccCCCEEEEEEcCCCCEEEEeec----CcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEE
Confidence 4678899999999999999999999998 8999999999988888889999999999999999887655 999999
Q ss_pred eecCCCcEEEEeecccccccc-----------cCCCCCcccccccCCC-CCCCCcccccccccccccchhHHHhhhhhcc
Q 000399 1398 WNSQTGKLLSVFAEQSMDSLH-----------GGSPSSSISKINTDQV-GMLNSNTLSSGILSTAFDGNLYTCLHHIECV 1465 (1566)
Q Consensus 1398 WDl~tg~~l~~l~~h~~~~~~-----------~~~~~~~~~~~~~~~~-~~~~~~~~~~~V~svafsp~~~t~v~~~pdg 1465 (1566)
||+.+++.+..+..+...... .+..++.+.+|+.... ....+..|...|.+++|+|+ +
T Consensus 78 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~----------~ 147 (289)
T cd00200 78 WDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPD----------G 147 (289)
T ss_pred EEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCc----------C
Confidence 999988877777665432211 1111333444443321 12223345566777777765 7
Q ss_pred ceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCc
Q 000399 1466 ERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN 1545 (1566)
Q Consensus 1466 ~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk 1545 (1566)
+++++++.|+.|++||+++++.+..+..| ...|.+++++ ++++.+++++.|+.|++||+++++
T Consensus 148 ~~l~~~~~~~~i~i~d~~~~~~~~~~~~~------~~~i~~~~~~-----------~~~~~l~~~~~~~~i~i~d~~~~~ 210 (289)
T cd00200 148 TFVASSSQDGTIKLWDLRTGKCVATLTGH------TGEVNSVAFS-----------PDGEKLLSSSSDGTIKLWDLSTGK 210 (289)
T ss_pred CEEEEEcCCCcEEEEEccccccceeEecC------ccccceEEEC-----------CCcCEEEEecCCCcEEEEECCCCc
Confidence 88888888999999999999888888755 3455666665 555678888889999999999999
Q ss_pred eeEEeeccCceeeEeeeeccC
Q 000399 1546 VIASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1546 ~l~~l~gH~~~V~~VafspdG 1566 (1566)
.+..+.+|...|.+++|+|++
T Consensus 211 ~~~~~~~~~~~i~~~~~~~~~ 231 (289)
T cd00200 211 CLGTLRGHENGVNSVAFSPDG 231 (289)
T ss_pred eecchhhcCCceEEEEEcCCC
Confidence 999998999999999999863
No 484
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.75 E-value=8e-20 Score=218.65 Aligned_cols=171 Identities=15% Similarity=0.033 Sum_probs=121.5
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeeccc--ccccccchhhhcCCCCCCCCCCCCcccCCCcc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKA--SGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~--~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
.++|++.+.||+|+||+||+|+++. .++..+|||++..... ......+.+. +|+++|+.++|+||+
T Consensus 17 ~~~Y~~~~~IG~G~fg~Vy~a~~~~-----~~~~~vAiK~~~~~~~~~~~~~~~~~~~-------~E~~iL~~L~h~~iv 84 (365)
T PRK09188 17 SARFVETAVLKRDVFSTVERGYFAG-----DPGTARAVRRRVSEVPWWSKPLARHLAA-------REIRALKTVRGIGVV 84 (365)
T ss_pred cCCceEccEEeecCcEEEEEEEEcC-----CCCeEEEEEEecccccccccHHHHHHHH-------HHHHHHHhccCCCCC
Confidence 5679999999999999999987531 2466789998753211 0111122232 799999999999998
Q ss_pred c-ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCc-cCCCccccccchh
Q 000399 239 P-VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSV-CPSNVLLTDSCWS 315 (1566)
Q Consensus 239 ~-l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDL-Kp~NILl~~~~~~ 315 (1566)
+ +++. +..||||||++| +|.. +. +.. ...++.|++.||.|||++||+|||| ||+|||++.++
T Consensus 85 ~~l~~~----~~~~LVmE~~~G~~L~~-~~--~~~------~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~-- 149 (365)
T PRK09188 85 PQLLAT----GKDGLVRGWTEGVPLHL-AR--PHG------DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDG-- 149 (365)
T ss_pred cEEEEc----CCcEEEEEccCCCCHHH-hC--ccc------hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCC--
Confidence 5 5442 458999999998 7752 22 111 1457899999999999999999999 99999998887
Q ss_pred hhhhcCcCCCCccccccccCCCCCCcee--eeecCCcccccccccccccc
Q 000399 316 WLYICDKPLVGFNSIADWCTIPTSPMIG--CCIEGCSSQGLYADLKLSQS 363 (1566)
Q Consensus 316 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~--~~~~~~~gt~~Y~APE~l~~ 363 (1566)
.+||+|||+|+...... ...... .-.++..++..|+|||++..
T Consensus 150 ~ikLiDFGlA~~~~~~~-----~~~~~~~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 150 EAAVIDFQLASVFRRRG-----ALYRIAAYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred CEEEEECccceecccCc-----chhhhhhhhhhhhhhccCccCCcccCCh
Confidence 69999999999654211 000000 00123446777899998854
No 485
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.75 E-value=1.8e-17 Score=186.58 Aligned_cols=232 Identities=17% Similarity=0.198 Sum_probs=174.0
Q ss_pred eeehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcE
Q 000399 1318 SILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTL 1395 (1566)
Q Consensus 1318 ~~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtI 1395 (1566)
..+.+|..|+.+|.+|+.+|+.++++|||. |..-.||++.+|.....+.||++.|+++.|+.+|.+||+| +|.|
T Consensus 55 dS~~tF~~H~~svFavsl~P~~~l~aTGGg----DD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v 130 (399)
T KOG0296|consen 55 DSLVTFDKHTDSVFAVSLHPNNNLVATGGG----DDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKV 130 (399)
T ss_pred cceeehhhcCCceEEEEeCCCCceEEecCC----CceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccE
Confidence 356788999999999999999999999998 8999999999999999999999999999999999999999 8999
Q ss_pred EEeecCCCcEEEEeec----------cc-ccccccCCCCCcccccccCC-CCCCCCcccccccccccccchhHHHhhhhh
Q 000399 1396 HVWNSQTGKLLSVFAE----------QS-MDSLHGGSPSSSISKINTDQ-VGMLNSNTLSSGILSTAFDGNLYTCLHHIE 1463 (1566)
Q Consensus 1396 kLWDl~tg~~l~~l~~----------h~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~V~svafsp~~~t~v~~~p 1463 (1566)
+||+..+|.....+.. |. ......++.++.+.+|.... .....+.+|+..+++-.|.|
T Consensus 131 ~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~p---------- 200 (399)
T KOG0296|consen 131 LVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIP---------- 200 (399)
T ss_pred EEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccC----------
Confidence 9999999988877742 21 11333444555566665544 33344556666666666655
Q ss_pred ccceEEEEecCceEEEEEccCCceeeeeccCCcccCchh---hHHHh----------------------hccC-------
Q 000399 1464 CVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS---LVSAI----------------------CACG------- 1511 (1566)
Q Consensus 1464 dg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~---~V~sv----------------------~~s~------- 1511 (1566)
||+.+++|..||+|++||..+|+++++.......-.+.- ..... +.++
T Consensus 201 dGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~ 280 (399)
T KOG0296|consen 201 DGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKP 280 (399)
T ss_pred CCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccc
Confidence 599999999999999999999999988873321000000 00000 0000
Q ss_pred -----CCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeec
Q 000399 1512 -----SEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIIS 1564 (1566)
Q Consensus 1512 -----~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafsp 1564 (1566)
...+-.+.+|..-.+.|+|+-||+|-|||+.+.+....+. |+..|+.+.|-+
T Consensus 281 ~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R~~c~-he~~V~~l~w~~ 337 (399)
T KOG0296|consen 281 SQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLRHICE-HEDGVTKLKWLN 337 (399)
T ss_pred cchhhhhhhhhcccccccchhhcccccceEEEEecccchhheecc-CCCceEEEEEcC
Confidence 0011123355566789999999999999999888877776 999999999976
No 486
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.74 E-value=1.3e-19 Score=232.89 Aligned_cols=209 Identities=22% Similarity=0.244 Sum_probs=163.2
Q ss_pred ccccceeeeecchhhHHHHHhhhccCC-cchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCCCcccc
Q 000399 163 ALFPIAFIGICSYSIFEELASNFLSGC-LEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNVAPV 240 (1566)
Q Consensus 163 ~y~~~~~IG~G~fG~Vy~a~~~~~~~~-~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNIV~l 240 (1566)
+..+.+.||+|.||.|++|.-+..... ......||||.++..... .+.+.+. .|+.+|+.+ +||||+.+
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~--------~El~~m~~~g~H~niv~l 367 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLM--------SELNVLKELGKHPNIVNL 367 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHH--------HHHHHHHHhcCCcchhhh
Confidence 446777999999999999874321111 123678999998876444 4444454 599999999 59999999
Q ss_pred cccccccCceeeeccCCcc-chhhhhccCc------------c--cccchhHHHHHHHHHHHHHHHHhhccccCCCccCC
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSP------------N--ALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPS 305 (1566)
Q Consensus 241 ~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~------------~--~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~ 305 (1566)
+|++..++.+++|+||+.. +|.++++..+ . ..++..+...+++||+.|++||+++.+|||||...
T Consensus 368 lG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaR 447 (609)
T KOG0200|consen 368 LGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAAR 447 (609)
T ss_pred eeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhh
Confidence 9999999999999999995 9999998654 0 12677788999999999999999999999999999
Q ss_pred CccccccchhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcc--cccccccccccccchhhccccccccccCCchh
Q 000399 306 NVLLTDSCWSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSS--QGLYADLKLSQSMDWHSQFNRWWRGELSNFEY 383 (1566)
Q Consensus 306 NILl~~~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~g--t~~Y~APE~l~~~~y~~~~d~Ws~G~isnfey 383 (1566)
|||++.+. .+||+|||+||.......+... ...+ ...|||||.+....|+.++|+|+.|++
T Consensus 448 NVLi~~~~--~~kIaDFGlar~~~~~~~y~~~----------~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~----- 510 (609)
T KOG0200|consen 448 NVLITKNK--VIKIADFGLARDHYNKDYYRTK----------SSAGTLPVKWMAPESLFDRVFTSKSDVWSFGIL----- 510 (609)
T ss_pred hEEecCCC--EEEEccccceeccCCCCceEec----------CCCCccceeecCHHHhccCcccccchhhHHHHH-----
Confidence 99999998 7999999999964432222111 1112 223999999999999999999999987
Q ss_pred hhHHHhhcccccCC
Q 000399 384 LLFLNKLAGRRWGD 397 (1566)
Q Consensus 384 L~~ln~~agrs~~d 397 (1566)
|+.+-.+.|-+|.+
T Consensus 511 L~EifsLG~~PYp~ 524 (609)
T KOG0200|consen 511 LWEIFTLGGTPYPG 524 (609)
T ss_pred HHHHhhCCCCCCCC
Confidence 55666666766644
No 487
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.74 E-value=9.9e-20 Score=198.45 Aligned_cols=198 Identities=18% Similarity=0.188 Sum_probs=152.2
Q ss_pred hhhhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcc-cCC
Q 000399 157 CSRIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHP 235 (1566)
Q Consensus 157 ~~~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~Hp 235 (1566)
.....+.|.+.+.||+|.||.+-+|+++ .++..+++|-+.+.... .++|. ||..---.| .|.
T Consensus 19 kv~l~d~y~I~k~lgeG~FgkIlL~eHr------~s~t~ivlKavp~p~tt---~~dF~--------rEfhY~~~Ls~H~ 81 (378)
T KOG1345|consen 19 KVDLEDVYTINKQLGEGRFGKILLAEHR------QSKTRIVLKAVPRPQTT---QADFV--------REFHYSFFLSPHQ 81 (378)
T ss_pred ccchhhhhhHHHHhcccceeeEEeeecc------CCceEEEeeccCcchhh---HHHHH--------HHhccceeeccch
Confidence 3445678999999999999999999984 67888999998765332 34555 477665555 489
Q ss_pred Cccccccc-ccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccc
Q 000399 236 NVAPVLGL-LKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSC 313 (1566)
Q Consensus 236 NIV~l~~~-~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~ 313 (1566)
||+.-|++ |++.+.+++++||++. +|.+-+. ...+.|...+.++.|+++|+.|+|++++||||||.+||||-...
T Consensus 82 hIi~tY~vaFqt~d~YvF~qE~aP~gdL~snv~---~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~d 158 (378)
T KOG1345|consen 82 HIIDTYEVAFQTSDAYVFVQEFAPRGDLRSNVE---AAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDAD 158 (378)
T ss_pred hhhHHHHHHhhcCceEEEeeccCccchhhhhcC---cccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCC
Confidence 99998874 7888888999999995 9988886 23467888899999999999999999999999999999996554
Q ss_pred hhhhhhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccc-----hhhccccccccccCCchhhhHHH
Q 000399 314 WSWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMD-----WHSQFNRWWRGELSNFEYLLFLN 388 (1566)
Q Consensus 314 ~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~-----y~~~~d~Ws~G~isnfeyL~~ln 388 (1566)
..++||||||+.+......++ . --+..|.+||+..... -.+..|.|..|.| +++
T Consensus 159 f~rvKlcDFG~t~k~g~tV~~-------~-------~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi-------~f~ 217 (378)
T KOG1345|consen 159 FYRVKLCDFGLTRKVGTTVKY-------L-------EYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGII-------FFY 217 (378)
T ss_pred ccEEEeeecccccccCceehh-------h-------hhhcccCCcHHHhhccccceEecccccchheeee-------eee
Confidence 458999999998854321111 0 1233488898775332 2447799999988 777
Q ss_pred hhccccc
Q 000399 389 KLAGRRW 395 (1566)
Q Consensus 389 ~~agrs~ 395 (1566)
.+.|..+
T Consensus 218 cltG~~P 224 (378)
T KOG1345|consen 218 CLTGKFP 224 (378)
T ss_pred eecCCCc
Confidence 7788654
No 488
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.73 E-value=3e-18 Score=198.20 Aligned_cols=209 Identities=16% Similarity=0.235 Sum_probs=167.8
Q ss_pred CcccccccCccCCCCceEeee--ee---------hhhhhccCcceeeeecC-cceEEEeeccCCCcccceeeEEecccc-
Q 000399 1298 PDFLGRVGGLKDESPWKIKAS--IL---------SSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKWELTRIN- 1364 (1566)
Q Consensus 1298 ~~~LaSgS~D~~I~vWdl~~~--~l---------~tl~gH~~~V~slafsp-d~~~LaSgS~~~~~D~tVrlWDl~tg~- 1364 (1566)
+..+|+++..+.|.|||.... .. ..++||++.-++++|++ +...++||+. |++|++||+....
T Consensus 137 p~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~----d~~i~lwdi~~~~~ 212 (422)
T KOG0264|consen 137 PNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSD----DHTICLWDINAESK 212 (422)
T ss_pred CcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccC----CCcEEEEecccccc
Confidence 445999999999999998743 11 26889999999999998 4668888887 9999999996432
Q ss_pred ------cccccccccccccceEEeecCCce-eec--cCcEEEeecCCC--cEEEEeecccccccccCCCCCcccccccCC
Q 000399 1365 ------CVSGYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTG--KLLSVFAEQSMDSLHGGSPSSSISKINTDQ 1433 (1566)
Q Consensus 1365 ------~i~tl~gH~~~V~sVafsp~g~~L-aSg--DgtIkLWDl~tg--~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~ 1433 (1566)
....+.+|++.|+.++|++....+ +|+ |+.+.|||+|++ ++...
T Consensus 213 ~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~~~~~~~------------------------- 267 (422)
T KOG0264|consen 213 EDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNTSKPSHS------------------------- 267 (422)
T ss_pred CCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCCCCCccc-------------------------
Confidence 234579999999999999988765 555 999999999964 22222
Q ss_pred CCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCC-ceeeeeccCCcccCchhhHHHhhccCC
Q 000399 1434 VGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGS 1512 (1566)
Q Consensus 1434 ~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg-~~l~~~~~h~~~v~~~~~V~sv~~s~~ 1512 (1566)
..+|+..|+|++|+|. ++.+|+|||.|++|++||+|+. ++++++.+| ...|.+|.|+|.
T Consensus 268 -----~~ah~~~vn~~~fnp~---------~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H------~dev~~V~WSPh 327 (422)
T KOG0264|consen 268 -----VKAHSAEVNCVAFNPF---------NEFILATGSADKTVALWDLRNLNKPLHTFEGH------EDEVFQVEWSPH 327 (422)
T ss_pred -----ccccCCceeEEEeCCC---------CCceEEeccCCCcEEEeechhcccCceeccCC------CcceEEEEeCCC
Confidence 2346788999999997 4789999999999999999985 577888876 556788889887
Q ss_pred CcccCCCcccchhHHHhccCCCceeEEeeccCc--------------eeEEeeccCceeeEeeeecc
Q 000399 1513 EKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN--------------VIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1513 ~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk--------------~l~~l~gH~~~V~~Vafspd 1565 (1566)
.. ..|||++.|+.+.+||+..-. ++..-.||...|....|+|+
T Consensus 328 ~e----------tvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ 384 (422)
T KOG0264|consen 328 NE----------TVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPN 384 (422)
T ss_pred CC----------ceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCC
Confidence 65 478999999999999987422 24555699999999999986
No 489
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.73 E-value=8.2e-18 Score=195.57 Aligned_cols=211 Identities=16% Similarity=0.209 Sum_probs=169.2
Q ss_pred cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEeccccccc
Q 000399 1289 PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTRINCVS 1367 (1566)
Q Consensus 1289 fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~tg~~i~ 1367 (1566)
|||...+ +|.+|+| ..+.+|+..+. ...++.-....|.++.|..||.++++|.. .|.|+|+|+.+...++
T Consensus 34 fsp~~P~---d~aVt~S--~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~----sG~V~vfD~k~r~iLR 104 (487)
T KOG0310|consen 34 FSPKHPY---DFAVTSS--VRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDE----SGHVKVFDMKSRVILR 104 (487)
T ss_pred cCCCCCC---ceEEecc--cEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCC----cCcEEEeccccHHHHH
Confidence 7775554 5566766 56888887765 56667778899999999999999999998 8999999987777789
Q ss_pred ccccccccccceEEeecCCce-eec--cCcEEEeecCCCcEEEEeecccccccccCCCCCcccccccCCCCCCCCccccc
Q 000399 1368 GYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSS 1444 (1566)
Q Consensus 1368 tl~gH~~~V~sVafsp~g~~L-aSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1444 (1566)
.+.+|+.+|..+.|+|.++.+ ++| |+.+++||+.++.....+.+| +.
T Consensus 105 ~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~h------------------------------tD 154 (487)
T KOG0310|consen 105 QLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGH------------------------------TD 154 (487)
T ss_pred HHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCC------------------------------cc
Confidence 999999999999999998865 666 788999999988865455554 66
Q ss_pred ccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCC-ceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccc
Q 000399 1445 GILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG-QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVAS 1523 (1566)
Q Consensus 1445 ~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg-~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spd 1523 (1566)
.|.+.+++|.. +.+++|||.||+||+||+++. ..+.++. |..+|..|++- |.
T Consensus 155 YVR~g~~~~~~---------~hivvtGsYDg~vrl~DtR~~~~~v~eln-------hg~pVe~vl~l-----------ps 207 (487)
T KOG0310|consen 155 YVRCGDISPAN---------DHIVVTGSYDGKVRLWDTRSLTSRVVELN-------HGCPVESVLAL-----------PS 207 (487)
T ss_pred eeEeeccccCC---------CeEEEecCCCceEEEEEeccCCceeEEec-------CCCceeeEEEc-----------CC
Confidence 68888998863 568999999999999999986 5665554 56677777775 44
Q ss_pred hhHHHhccCCCceeEEeeccCce-eEEeeccCceeeEeeeeccC
Q 000399 1524 PSWIAAGLSSGQCRLFDVRSGNV-IASWRAHDGYVTKVRIISKR 1566 (1566)
Q Consensus 1524 g~~LaSGs~Dg~I~lWD~~sgk~-l~~l~gH~~~V~~VafspdG 1566 (1566)
|..||+++.. .|++||+.+|.. +.....|...|+|+++..++
T Consensus 208 gs~iasAgGn-~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~ 250 (487)
T KOG0310|consen 208 GSLIASAGGN-SVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDS 250 (487)
T ss_pred CCEEEEcCCC-eEEEEEecCCceehhhhhcccceEEEEEeecCC
Confidence 5678888866 599999996654 44445599999999998754
No 490
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.73 E-value=6.9e-19 Score=203.77 Aligned_cols=207 Identities=18% Similarity=0.155 Sum_probs=154.6
Q ss_pred hhhcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCc
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNV 237 (1566)
Q Consensus 159 ~~~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNI 237 (1566)
.+...|..+++||+|+|++||++.+.. .......||+|.+....... .. .+|+++|..+. +.||
T Consensus 33 ~~~~~~~~v~kigeGsFssv~~a~~~~---~~~~~~~valk~i~~ts~p~----ri--------~~El~~L~~~gG~~ni 97 (418)
T KOG1167|consen 33 FISNAYKVVNKIGEGSFSSVYKATDIE---QDTKRRYVALKAIYRTSSPS----RI--------LNELEMLYRLGGSDNI 97 (418)
T ss_pred hhhhhhhhhccccccchhhhhhhhHhh---hccccceEeeeecccccCch----HH--------HHHHHHHHHhccchhh
Confidence 345679999999999999999999742 12267889999987643221 12 26899998884 8999
Q ss_pred ccccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccchhh
Q 000399 238 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSW 316 (1566)
Q Consensus 238 V~l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~~~ 316 (1566)
+.+.+++..++...+||||++. +..+++.. ++...++.|++.++.||.++|.+|||||||||+|+|.+.... +
T Consensus 98 ~~~~~~~rnnd~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~-r 171 (418)
T KOG1167|consen 98 IKLNGCFRNNDQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQ-R 171 (418)
T ss_pred hcchhhhccCCeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccC-C
Confidence 9999999999999999999998 77777762 467889999999999999999999999999999999998763 6
Q ss_pred hhhcCcCCCCcccccc------c----cCCC-----------------CCCce------eeeecCCcccccccccccccc
Q 000399 317 LYICDKPLVGFNSIAD------W----CTIP-----------------TSPMI------GCCIEGCSSQGLYADLKLSQS 363 (1566)
Q Consensus 317 vKL~DFGlA~~~~~~~------~----~~~~-----------------~~~~~------~~~~~~~~gt~~Y~APE~l~~ 363 (1566)
-.|+|||+|....... . .... .+... ......-.||+.|+|||++..
T Consensus 172 g~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k 251 (418)
T KOG1167|consen 172 GVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFR 251 (418)
T ss_pred ceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhh
Confidence 7899999997211100 0 0000 00000 001233469999999998865
Q ss_pred cc-hhhccccccccccCCchhhhHHHhhccc
Q 000399 364 MD-WHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 364 ~~-y~~~~d~Ws~G~isnfeyL~~ln~~agr 393 (1566)
.+ -+..+|+|+.|+| .|-.+++|
T Consensus 252 ~~~QttaiDiws~GVI-------~Lslls~~ 275 (418)
T KOG1167|consen 252 CPRQTTAIDIWSAGVI-------LLSLLSRR 275 (418)
T ss_pred ccCcCCccceeeccce-------eehhhccc
Confidence 44 4568999999999 55555543
No 491
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.73 E-value=5.3e-18 Score=225.98 Aligned_cols=215 Identities=11% Similarity=0.129 Sum_probs=161.1
Q ss_pred cccccCccCCCCceEeee-eehhhhhccCcceeeeecC-cceEEEeeccCCCcccceeeEEecccccccccccccccccc
Q 000399 1301 LGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVND 1378 (1566)
Q Consensus 1301 LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafsp-d~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~s 1378 (1566)
|++|+.|++|++||+.++ .+..+.+|.+.|++++|+| ++.+|+|||. |++|++||+.++.++.++..| ..|.+
T Consensus 548 las~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~----Dg~v~iWd~~~~~~~~~~~~~-~~v~~ 622 (793)
T PLN00181 548 VASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSD----DGSVKLWSINQGVSIGTIKTK-ANICC 622 (793)
T ss_pred EEEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcC----CCEEEEEECCCCcEEEEEecC-CCeEE
Confidence 999999999999999865 6778899999999999997 7899999998 999999999999998888755 67899
Q ss_pred eEEee-cCCceeec--cCcEEEeecCCCc-EEEEeeccccc----------ccccCCCCCcccccccCCC-------CCC
Q 000399 1379 ICVLS-SSGRIASC--DGTLHVWNSQTGK-LLSVFAEQSMD----------SLHGGSPSSSISKINTDQV-------GML 1437 (1566)
Q Consensus 1379 Vafsp-~g~~LaSg--DgtIkLWDl~tg~-~l~~l~~h~~~----------~~~~~~~~~~~~~~~~~~~-------~~~ 1437 (1566)
++|++ ++..+++| ||+|++||+++++ .+.++.+|... .+.+++.++.+.+|+.... ...
T Consensus 623 v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~ 702 (793)
T PLN00181 623 VQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSISGINETPLH 702 (793)
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCccccCCcceE
Confidence 99965 57777766 9999999998765 45556555432 2334444556667765421 122
Q ss_pred CCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCc-c------cCchhhHHHhhcc
Q 000399 1438 NSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT-E------LGFPSLVSAICAC 1510 (1566)
Q Consensus 1438 ~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~-~------v~~~~~V~sv~~s 1510 (1566)
.+.+|...+.+++|+++ ++++++|+.|++|++||......+..+..... . ..+...|.+++
T Consensus 703 ~~~gh~~~i~~v~~s~~----------~~~lasgs~D~~v~iw~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~-- 770 (793)
T PLN00181 703 SFMGHTNVKNFVGLSVS----------DGYIATGSETNEVFVYHKAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVC-- 770 (793)
T ss_pred EEcCCCCCeeEEEEcCC----------CCEEEEEeCCCEEEEEECCCCCceEEEecccCCcccccccCCCCcEEEEEE--
Confidence 34456666777777765 88999999999999999887765544432111 0 01223344444
Q ss_pred CCCcccCCCcccchhHHHhccCCCceeEEee
Q 000399 1511 GSEKMQAGGAVASPSWIAAGLSSGQCRLFDV 1541 (1566)
Q Consensus 1511 ~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~ 1541 (1566)
+++++..|++|+.||.|++||+
T Consensus 771 ---------ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 771 ---------WRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred ---------EcCCCCeEEEecCCCcEEEEec
Confidence 4567789999999999999996
No 492
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.73 E-value=3.9e-18 Score=197.29 Aligned_cols=241 Identities=17% Similarity=0.137 Sum_probs=173.4
Q ss_pred cccCCCCcccccccccccccccccchHHHHHH-----hhccccCCCceeccCCCCCCCCCcccccccCccCCCCceEeee
Q 000399 1244 IPQSQGSRSSKNLIPQRRVYDYHKSSVERQEA-----TSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKAS 1318 (1566)
Q Consensus 1244 ~~~~~~~~~~~~~i~~~~~~~le~~~~~~~~~-----~~~~~~H~~~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~ 1318 (1566)
+||......++..-...-+++....++..... ......|+..-..++.+-.. ...|++||.|++|++||+.+.
T Consensus 133 mPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~--~g~Lls~~~d~~i~lwdi~~~ 210 (422)
T KOG0264|consen 133 MPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQ--EGTLLSGSDDHTICLWDINAE 210 (422)
T ss_pred CCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeeccccccccccccc--ceeEeeccCCCcEEEEecccc
Confidence 46666655544444444555554333332211 11233454432222222111 122999999999999999853
Q ss_pred --------eehhhhhccCcceeeeecC-cceEEEeeccCCCcccceeeEEec--ccccccccccccccccceEEeecCCc
Q 000399 1319 --------ILSSIRAHHGALRSVAVGQ-DECTVFTAGIGPGFKGTVQKWELT--RINCVSGYYGHEEVVNDICVLSSSGR 1387 (1566)
Q Consensus 1319 --------~l~tl~gH~~~V~slafsp-d~~~LaSgS~~~~~D~tVrlWDl~--tg~~i~tl~gH~~~V~sVafsp~g~~ 1387 (1566)
....+.+|+..|.+++|++ +..+|+|++. |+.+.|||++ +.++.....+|.+.|+|++|+|-+..
T Consensus 211 ~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~d----d~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ 286 (422)
T KOG0264|consen 211 SKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGD----DGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEF 286 (422)
T ss_pred ccCCccccceEEeecCCcceehhhccccchhhheeecC----CCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCc
Confidence 3457789999999999999 6778888887 9999999999 56777888999999999999999887
Q ss_pred e-eec--cCcEEEeecCC-CcEEEEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhh
Q 000399 1388 I-ASC--DGTLHVWNSQT-GKLLSVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIE 1463 (1566)
Q Consensus 1388 L-aSg--DgtIkLWDl~t-g~~l~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~p 1463 (1566)
+ |+| |++|.|||+|+ .+++.++.+| ...|.+|.|+|+.
T Consensus 287 ilAT~S~D~tV~LwDlRnL~~~lh~~e~H------------------------------~dev~~V~WSPh~-------- 328 (422)
T KOG0264|consen 287 ILATGSADKTVALWDLRNLNKPLHTFEGH------------------------------EDEVFQVEWSPHN-------- 328 (422)
T ss_pred eEEeccCCCcEEEeechhcccCceeccCC------------------------------CcceEEEEeCCCC--------
Confidence 6 665 99999999995 4555555554 6679999999984
Q ss_pred ccceEEEEecCceEEEEEccCCceeee-----------eccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccC
Q 000399 1464 CVERLVVGIGNGSLRFIDINQGQKLHL-----------WRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLS 1532 (1566)
Q Consensus 1464 dg~~L~sgs~DgtIrlWDi~tg~~l~~-----------~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~ 1532 (1566)
...|++++.|+++.+||+..-..... +-.| .+|...|..+.++|...+ .|+|.+.
T Consensus 329 -etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~H---gGH~~kV~DfsWnp~ePW----------~I~Svae 394 (422)
T KOG0264|consen 329 -ETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIH---GGHTAKVSDFSWNPNEPW----------TIASVAE 394 (422)
T ss_pred -CceeEecccCCcEEEEeccccccccChhhhccCCcceeEEe---cCcccccccccCCCCCCe----------EEEEecC
Confidence 67899999999999999975221111 0112 146788999999988754 7889999
Q ss_pred CCceeEEeec
Q 000399 1533 SGQCRLFDVR 1542 (1566)
Q Consensus 1533 Dg~I~lWD~~ 1542 (1566)
|+.+.||...
T Consensus 395 DN~LqIW~~s 404 (422)
T KOG0264|consen 395 DNILQIWQMA 404 (422)
T ss_pred CceEEEeecc
Confidence 9999999975
No 493
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.72 E-value=2.6e-17 Score=173.83 Aligned_cols=224 Identities=16% Similarity=0.201 Sum_probs=179.5
Q ss_pred CCCceec--cCCCCCCCCCcccccccCccCCCCceEe--e----eeehhhhhccCcceeeeecCc----ceEEEeeccCC
Q 000399 1282 CEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIK--A----SILSSIRAHHGALRSVAVGQD----ECTVFTAGIGP 1349 (1566)
Q Consensus 1282 H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~--~----~~l~tl~gH~~~V~slafspd----~~~LaSgS~~~ 1349 (1566)
|.+.++| +||+|.+ |++||.|++|++.-.+ + +.-..+..|.+.|++++|..| +..++|++.+
T Consensus 88 hkgsiyc~~ws~~gel-----iatgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gag- 161 (350)
T KOG0641|consen 88 HKGSIYCTAWSPCGEL-----IATGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAG- 161 (350)
T ss_pred cCccEEEEEecCccCe-----EEecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCC-
Confidence 6677777 8999998 9999999999876443 3 234567789999999999764 6789999874
Q ss_pred CcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCCCCccc
Q 000399 1350 GFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1566)
Q Consensus 1350 ~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~ 1427 (1566)
|..|.+-|-.+|+....+.||++-|.++- +-.+-.++|| |.+|++||++-..++.++...... .
T Consensus 162 --dc~iy~tdc~~g~~~~a~sghtghilaly-swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~----~------- 227 (350)
T KOG0641|consen 162 --DCKIYITDCGRGQGFHALSGHTGHILALY-SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHD----G------- 227 (350)
T ss_pred --cceEEEeecCCCCcceeecCCcccEEEEE-EecCcEEEccCCCceEEEEeeeccceeeeccCcccC----C-------
Confidence 88888888889999999999999998874 7778888988 999999999999999887542100 0
Q ss_pred ccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchhhHHHh
Q 000399 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPSLVSAI 1507 (1566)
Q Consensus 1428 ~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~~V~sv 1507 (1566)
--.++.|.+++.+|. |+++++|..|.+..+||++-|+.+..|..| +..|++|
T Consensus 228 ------------glessavaav~vdps----------grll~sg~~dssc~lydirg~r~iq~f~ph------sadir~v 279 (350)
T KOG0641|consen 228 ------------GLESSAVAAVAVDPS----------GRLLASGHADSSCMLYDIRGGRMIQRFHPH------SADIRCV 279 (350)
T ss_pred ------------CcccceeEEEEECCC----------cceeeeccCCCceEEEEeeCCceeeeeCCC------ccceeEE
Confidence 001345677777776 999999999999999999999999999876 5567888
Q ss_pred hccCCCcccCCCcccchhHHHhccCCCceeEEeeccCc-----eeEEeeccCceeeEeeeecc
Q 000399 1508 CACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGN-----VIASWRAHDGYVTKVRIISK 1565 (1566)
Q Consensus 1508 ~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk-----~l~~l~gH~~~V~~Vafspd 1565 (1566)
.|+|. ..++.+||.|..|++-|+. |. .+-....|...+..+.|+|.
T Consensus 280 rfsp~-----------a~yllt~syd~~ikltdlq-gdla~el~~~vv~ehkdk~i~~rwh~~ 330 (350)
T KOG0641|consen 280 RFSPG-----------AHYLLTCSYDMKIKLTDLQ-GDLAHELPIMVVAEHKDKAIQCRWHPQ 330 (350)
T ss_pred EeCCC-----------ceEEEEecccceEEEeecc-cchhhcCceEEEEeccCceEEEEecCc
Confidence 87754 4689999999999999986 33 23344568888889999885
No 494
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.72 E-value=8.2e-18 Score=190.90 Aligned_cols=230 Identities=16% Similarity=0.192 Sum_probs=168.8
Q ss_pred ccccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeeeeehhhhh--ccCcceeeeecCcceEEEeeccCCCccc
Q 000399 1278 NLMKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKASILSSIRA--HHGALRSVAVGQDECTVFTAGIGPGFKG 1353 (1566)
Q Consensus 1278 ~~~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~~l~tl~g--H~~~V~slafspd~~~LaSgS~~~~~D~ 1353 (1566)
+...|...|.. +|||.++ |+++|.|..+.+||+.++......+ |..++.+++|.|||..+++||. |+
T Consensus 264 tlvgh~~~V~yi~wSPDdry-----LlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~----dr 334 (519)
T KOG0293|consen 264 TLVGHSQPVSYIMWSPDDRY-----LLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSP----DR 334 (519)
T ss_pred eeecccCceEEEEECCCCCe-----EEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCC----CC
Confidence 45567777776 8999999 9999999999999999995555443 4589999999999999999999 99
Q ss_pred ceeeEEeccccccccccccc-ccccceEEeecCCcee-ec-cCcEEEeecCCCcEEEEeecccccccccCCC--------
Q 000399 1354 TVQKWELTRINCVSGYYGHE-EVVNDICVLSSSGRIA-SC-DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSP-------- 1422 (1566)
Q Consensus 1354 tVrlWDl~tg~~i~tl~gH~-~~V~sVafsp~g~~La-Sg-DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~-------- 1422 (1566)
++..||+. |+.....+|-. ..|.+++.+++|++++ ++ |..|++++.++.........+......+.+.
T Consensus 335 ~i~~wdlD-gn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~Lvn 413 (519)
T KOG0293|consen 335 TIIMWDLD-GNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVN 413 (519)
T ss_pred cEEEecCC-cchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEE
Confidence 99999986 34444454432 4589999999999874 44 9999999998765554444433322122222
Q ss_pred --CCcccccccCCC-CCCCCcccccc--cccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcc
Q 000399 1423 --SSSISKINTDQV-GMLNSNTLSSG--ILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTE 1497 (1566)
Q Consensus 1423 --~~~~~~~~~~~~-~~~~~~~~~~~--V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~ 1497 (1566)
+..+.+|+.... .+..+.+|..+ |-.-.|... +..++++||.|+.|++|+..+|+.+.++.||
T Consensus 414 L~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~---------~~~fiaSGSED~kvyIWhr~sgkll~~LsGH--- 481 (519)
T KOG0293|consen 414 LQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGG---------NDKFIASGSEDSKVYIWHRISGKLLAVLSGH--- 481 (519)
T ss_pred cccCeeEEeecchhhHHHHhhcccccceEEEeccCCC---------CcceEEecCCCceEEEEEccCCceeEeecCC---
Confidence 223344554322 22234444332 222233332 2579999999999999999999999999987
Q ss_pred cCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeec
Q 000399 1498 LGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVR 1542 (1566)
Q Consensus 1498 v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~ 1542 (1566)
...|++|+++|.+ ...+||||+||+||||-..
T Consensus 482 ---s~~vNcVswNP~~----------p~m~ASasDDgtIRIWg~~ 513 (519)
T KOG0293|consen 482 ---SKTVNCVSWNPAD----------PEMFASASDDGTIRIWGPS 513 (519)
T ss_pred ---cceeeEEecCCCC----------HHHhhccCCCCeEEEecCC
Confidence 5678999999865 3699999999999999765
No 495
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.72 E-value=1.3e-17 Score=205.47 Aligned_cols=185 Identities=19% Similarity=0.387 Sum_probs=151.5
Q ss_pred eehhhh-hccCcceeeeecCcceEEEeeccCCCcccceeeEEecc-----------------------------------
Q 000399 1319 ILSSIR-AHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWELTR----------------------------------- 1362 (1566)
Q Consensus 1319 ~l~tl~-gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl~t----------------------------------- 1362 (1566)
..+.+. +|.++|+++.||+||.+|||||. |+.|+||.+..
T Consensus 258 ~~Qe~~~ah~gaIw~mKFS~DGKyLAsaGe----D~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~ 333 (712)
T KOG0283|consen 258 VVQEISNAHKGAIWAMKFSHDGKYLASAGE----DGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKIS 333 (712)
T ss_pred EeeccccccCCcEEEEEeCCCCceeeecCC----CceEEEEEEeccchhcccccccchhhhhhhhccccCcccccccccc
Confidence 345666 89999999999999999999998 99999998743
Q ss_pred -------------------------cccccccccccccccceEEeecCCceeec-cCcEEEeecCCCcEEEEeecccccc
Q 000399 1363 -------------------------INCVSGYYGHEEVVNDICVLSSSGRIASC-DGTLHVWNSQTGKLLSVFAEQSMDS 1416 (1566)
Q Consensus 1363 -------------------------g~~i~tl~gH~~~V~sVafsp~g~~LaSg-DgtIkLWDl~tg~~l~~l~~h~~~~ 1416 (1566)
.++++.|.||.+.|.+|.|+..+-.|-|. |.|||||++....|+++|.
T Consensus 334 ~~~s~~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL~~F~------ 407 (712)
T KOG0283|consen 334 SRTSSSRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECLKVFS------ 407 (712)
T ss_pred ccccccccccCCccccCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCcceeeEEe------
Confidence 02245578999999999999877666333 9999999999999999885
Q ss_pred cccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCc
Q 000399 1417 LHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPT 1496 (1566)
Q Consensus 1417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~ 1496 (1566)
|...|+||+|+|. |.+++++||-||.||||++...+.+ .|..-
T Consensus 408 -------------------------HndfVTcVaFnPv---------DDryFiSGSLD~KvRiWsI~d~~Vv-~W~Dl-- 450 (712)
T KOG0283|consen 408 -------------------------HNDFVTCVAFNPV---------DDRYFISGSLDGKVRLWSISDKKVV-DWNDL-- 450 (712)
T ss_pred -------------------------cCCeeEEEEeccc---------CCCcEeecccccceEEeecCcCeeE-eehhh--
Confidence 4667999999997 7899999999999999999855544 44432
Q ss_pred ccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeecc--------CceeeEeeeecc
Q 000399 1497 ELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAH--------DGYVTKVRIISK 1565 (1566)
Q Consensus 1497 ~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH--------~~~V~~Vafspd 1565 (1566)
...|+++|+. |||+..+.|+.+|.+++|+++..+....+.-+ ...|+++.|.|.
T Consensus 451 ----~~lITAvcy~-----------PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~ 512 (712)
T KOG0283|consen 451 ----RDLITAVCYS-----------PDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPG 512 (712)
T ss_pred ----hhhheeEEec-----------cCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCC
Confidence 4678888886 66678999999999999999988877665421 127999998763
No 496
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.72 E-value=6.2e-18 Score=203.44 Aligned_cols=198 Identities=16% Similarity=0.224 Sum_probs=169.8
Q ss_pred ccCCCceec--cCCCCCCCCCcccccccCccCCCCceEeee--------eehhhh-----hccCcceeeeecCcceEEEe
Q 000399 1280 MKCEPWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS--------ILSSIR-----AHHGALRSVAVGQDECTVFT 1344 (1566)
Q Consensus 1280 ~~H~~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~--------~l~tl~-----gH~~~V~slafspd~~~LaS 1344 (1566)
.+|++.+|+ .+||+.. ++|||.|++|+.||.+-. .+.++. .-++.|.|+++|||+.+++.
T Consensus 451 ~AHdgaIWsi~~~pD~~g-----~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~Spdgk~LaV 525 (888)
T KOG0306|consen 451 RAHDGAIWSISLSPDNKG-----FVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSVSPDGKLLAV 525 (888)
T ss_pred hccccceeeeeecCCCCc-----eEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEEcCCCcEEEE
Confidence 369999999 6999998 999999999999997631 111111 24689999999999999999
Q ss_pred eccCCCcccceeeEEecccccccccccccccccceEEeecCCceeec--cCcEEEeecCCCcEEEEeecccccccccCCC
Q 000399 1345 AGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRIASC--DGTLHVWNSQTGKLLSVFAEQSMDSLHGGSP 1422 (1566)
Q Consensus 1345 gS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~LaSg--DgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~ 1422 (1566)
+-- |.||+||-+.+-+.--++.||.=+|.|+.++|+++.+++| |.+|++|-+.=|.|-+.+-.|
T Consensus 526 sLL----dnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fAH---------- 591 (888)
T KOG0306|consen 526 SLL----DNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFAH---------- 591 (888)
T ss_pred Eec----cCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhcc----------
Confidence 998 9999999999999999999999999999999999999988 999999999999988766554
Q ss_pred CCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCceeeeeccCCcccCchh
Q 000399 1423 SSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQKLHLWRGEPTELGFPS 1502 (1566)
Q Consensus 1423 ~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~~l~~~~~h~~~v~~~~ 1502 (1566)
...|.++.|-|. ...+.|+|.|+.|+-||.....++.++.+| ..
T Consensus 592 --------------------dDSvm~V~F~P~----------~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H------~~ 635 (888)
T KOG0306|consen 592 --------------------DDSVMSVQFLPK----------THLFFTCGKDGKVKQWDGEKFEEIQKLDGH------HS 635 (888)
T ss_pred --------------------cCceeEEEEccc----------ceeEEEecCcceEEeechhhhhhheeeccc------hh
Confidence 556888888886 678999999999999999999999999987 34
Q ss_pred hHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeecc
Q 000399 1503 LVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRS 1543 (1566)
Q Consensus 1503 ~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~s 1543 (1566)
.|+|++++ |+|.+++|+|.|.+|++|.-..
T Consensus 636 ev~cLav~-----------~~G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 636 EVWCLAVS-----------PNGSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred eeeeeEEc-----------CCCCeEEeccCCceeEeeeccC
Confidence 45666554 7778999999999999998543
No 497
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=5.7e-18 Score=215.17 Aligned_cols=197 Identities=18% Similarity=0.124 Sum_probs=147.7
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCccc-CCCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLR-HPNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~-HpNIV~ 239 (1566)
...|.+.+.||+|+|+.|-.+.... .....+|+|.+....... .+.. +.-.|..+-+.+. |+|++.
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~-----~~~~~~a~~~~s~~~~~~----~~~~----~i~~e~~~~~~~s~h~n~~~ 85 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSR-----DPESSSATKPISIPPKSE----DSSE----HIDTETDIQKKLSKHSNTVH 85 (601)
T ss_pred cccccccccccccccchhhhhhhcC-----CCcceeeccCCCCCCCcc----chhh----hcCccccccccccccccccc
Confidence 3468889999999999999877531 345556666655432111 1111 1225777777776 999999
Q ss_pred ccccccccCceeeeccCCcc-chhhhhccCcccccchhHHHHHHHHHHHHHHHHh-hccccCCCccCCCccccccchhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLH-SLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~g-sL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH-~~gIiHrDLKp~NILl~~~~~~~v 317 (1566)
+++.....+..++++||..| ++.+.+........+...+.+++.|+..++.|+| ..++.||||||+|.+++..+. .+
T Consensus 86 ~~~~~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~-~l 164 (601)
T KOG0590|consen 86 MIEPSSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGS-AL 164 (601)
T ss_pred cCCccCCCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCC-cc
Confidence 99999999999999999887 8888883222225677888999999999999999 999999999999999999884 59
Q ss_pred hhcCcCCCCccccccccCCCCCCceeeeecCCcccccccccccccccch-hhcccccccccc
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDW-HSQFNRWWRGEL 378 (1566)
Q Consensus 318 KL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y-~~~~d~Ws~G~i 378 (1566)
|++|||+|....... .........|+.++.|+|||...+..| ....|.|+.|.+
T Consensus 165 ~~~df~~At~~~~~~-------g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~ 219 (601)
T KOG0590|consen 165 KIADFGLATAYRNKN-------GAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIV 219 (601)
T ss_pred cCCCchhhccccccC-------CcceeeecccCCCCCCCCcccccchhhcCCCccccccccc
Confidence 999999998654210 111112233334899999999998655 458899999987
No 498
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.71 E-value=1.2e-18 Score=187.22 Aligned_cols=200 Identities=19% Similarity=0.142 Sum_probs=149.6
Q ss_pred hcccccceeeeecchhhHHHHHhhhccCCcchhhccccceeeecccccccccchhhhcCCCCCCCCCCCCcccC-CCccc
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRH-PNVAP 239 (1566)
Q Consensus 161 ~~~y~~~~~IG~G~fG~Vy~a~~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~H-pNIV~ 239 (1566)
.++|+++++||.|+||.+|+|.. ..+|..||||+-......++ . ..|..+.+.|++ ..|..
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~------i~~ge~VAiK~Es~~a~hpq----L--------~yEskvY~iL~~g~GiP~ 75 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGIS------ITSGEEVAIKLESSKAKHPQ----L--------LYESKVYRILQGGVGIPH 75 (341)
T ss_pred ccceEEEEeecCCchhheeeeee------ccCCceEEEEeecccCCCcc----h--------hHHHHHHHHhccCCCCch
Confidence 56899999999999999999886 47899999999654332222 2 258888888875 78888
Q ss_pred ccccccccCceeeeccCCccchhhhhccCcccccchhHHHHHHHHHHHHHHHHhhccccCCCccCCCccccccch-hhhh
Q 000399 240 VLGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW-SWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~LV~E~~~gsL~~~l~~~~~~~l~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKp~NILl~~~~~-~~vK 318 (1566)
+..++.+...-.+|||.++.+|+++...+.+ .++..++..++.|++.-++|+|.+++|||||||+|+|+.-+.. .++.
T Consensus 76 i~~y~~e~~ynvlVMdLLGPsLEdLfnfC~R-~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~ 154 (341)
T KOG1163|consen 76 IRHYGTEKDYNVLVMDLLGPSLEDLFNFCSR-RFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLY 154 (341)
T ss_pred hhhhccccccceeeeeccCccHHHHHHHHhh-hhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEE
Confidence 8889989999999999999999999987644 4799999999999999999999999999999999999875432 3789
Q ss_pred hcCcCCCCccccccc-cCCCCCCceeeeecCCcccccccccccccccchhhccccccccccCCchhhhHHHh
Q 000399 319 ICDKPLVGFNSIADW-CTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNK 389 (1566)
Q Consensus 319 L~DFGlA~~~~~~~~-~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~y~~~~d~Ws~G~isnfeyL~~ln~ 389 (1566)
++|||+|+....... .+.+... .....||..|.+--...+.+-...-|.=+.|-+ ||++|.
T Consensus 155 LIDFGLaKky~d~~t~~HIpyre-----~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYv-----LmYfnr 216 (341)
T KOG1163|consen 155 LIDFGLAKKYRDIRTRQHIPYRE-----DRNLTGTARYASINAHLGIEQSRRDDMESVGYV-----LMYFNR 216 (341)
T ss_pred EEeccchhhhccccccccCcccc-----CCccceeeeehhhhhhhhhhhhhhhhhhhhcce-----eeeeec
Confidence 999999997654322 1111111 123348888877554444443444455555544 455554
No 499
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.71 E-value=1.2e-17 Score=193.20 Aligned_cols=216 Identities=19% Similarity=0.279 Sum_probs=172.2
Q ss_pred Cceec--cCCCCCCCCCcccccccCccCCCCceEeee-eehhhhhccCcceeeeecCcceEEEeeccCCCcccceeeEEe
Q 000399 1284 PWFWF--PTPAASWDGPDFLGRVGGLKDESPWKIKAS-ILSSIRAHHGALRSVAVGQDECTVFTAGIGPGFKGTVQKWEL 1360 (1566)
Q Consensus 1284 ~~V~~--fSpdg~~~~~~~LaSgS~D~~I~vWdl~~~-~l~tl~gH~~~V~slafspd~~~LaSgS~~~~~D~tVrlWDl 1360 (1566)
+.|.+ -+|+|.| |+.|+--+.+.+|.+.+| .+..+.+|-.+|+++.|+.||.+|+|||+ ||.|.+|++
T Consensus 82 g~v~al~s~n~G~~-----l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgsk----Dg~V~vW~l 152 (476)
T KOG0646|consen 82 GPVHALASSNLGYF-----LLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSK----DGAVLVWLL 152 (476)
T ss_pred cceeeeecCCCceE-----EEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCC----CccEEEEEE
Confidence 44555 4888998 888878899999999988 67788999999999999999999999999 999999998
Q ss_pred c---------ccccccccccccccccceEEeecCC--cee--eccCcEEEeecCCCcEEEEeecccccccccCCCCCccc
Q 000399 1361 T---------RINCVSGYYGHEEVVNDICVLSSSG--RIA--SCDGTLHVWNSQTGKLLSVFAEQSMDSLHGGSPSSSIS 1427 (1566)
Q Consensus 1361 ~---------tg~~i~tl~gH~~~V~sVafsp~g~--~La--SgDgtIkLWDl~tg~~l~~l~~h~~~~~~~~~~~~~~~ 1427 (1566)
. +-++.+.+.+|+-+|+++...+.|. ++. |-|.+||+||+..|..+.++...
T Consensus 153 ~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp--------------- 217 (476)
T KOG0646|consen 153 TDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFP--------------- 217 (476)
T ss_pred EeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecC---------------
Confidence 4 3367788999999999998766543 454 34999999999999988876542
Q ss_pred ccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCCc----------------eeeee
Q 000399 1428 KINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQGQ----------------KLHLW 1491 (1566)
Q Consensus 1428 ~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg~----------------~l~~~ 1491 (1566)
..+.+++.+|. ++.+..|+.+|.|.+.++.... .+..+
T Consensus 218 ----------------~si~av~lDpa----------e~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~ 271 (476)
T KOG0646|consen 218 ----------------SSIKAVALDPA----------ERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVL 271 (476)
T ss_pred ----------------CcceeEEEccc----------ccEEEecCCcceEEeeehhcCCcccccccccccccccceeeee
Confidence 33556666665 8899999999999998876432 22333
Q ss_pred ccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEeeccCceeEEeeccCceeeEeeeec
Q 000399 1492 RGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDVRSGNVIASWRAHDGYVTKVRIIS 1564 (1566)
Q Consensus 1492 ~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~~sgk~l~~l~gH~~~V~~Vafsp 1564 (1566)
.||.+ ...|+|++++ .||.+|++|+.||.|++||+.+.++++++....++|+.+.+.|
T Consensus 272 ~Gh~~----~~~ITcLais-----------~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~ 329 (476)
T KOG0646|consen 272 VGHEN----ESAITCLAIS-----------TDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINP 329 (476)
T ss_pred ccccC----CcceeEEEEe-----------cCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeec
Confidence 33321 1256666654 6778999999999999999999999999986788999998854
No 500
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.71 E-value=4.1e-18 Score=183.68 Aligned_cols=222 Identities=11% Similarity=0.056 Sum_probs=166.3
Q ss_pred cccccccccccccccchHHHHHHhhccccCCCceeccCCCCCCCCCcccccccCccCCCCceEee-eeehhhhhccCcce
Q 000399 1253 SKNLIPQRRVYDYHKSSVERQEATSNLMKCEPWFWFPTPAASWDGPDFLGRVGGLKDESPWKIKA-SILSSIRAHHGALR 1331 (1566)
Q Consensus 1253 ~~~~i~~~~~~~le~~~~~~~~~~~~~~~H~~~V~~fSpdg~~~~~~~LaSgS~D~~I~vWdl~~-~~l~tl~gH~~~V~ 1331 (1566)
++++ .-+++++.......+.- ..|...|.+...+..+ -+.++++|+|++|++|+..- +.+.++.||..-|.
T Consensus 80 ~GDG--SLrl~d~~~~s~Pi~~~----kEH~~EV~Svdwn~~~--r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy 151 (311)
T KOG0277|consen 80 SGDG--SLRLFDLTMPSKPIHKF----KEHKREVYSVDWNTVR--RRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIY 151 (311)
T ss_pred ecCc--eEEEeccCCCCcchhHH----HhhhhheEEecccccc--ceeEEeeccCCceEeecCCCCcceEeecCCccEEE
Confidence 4444 33466654333333322 2477788775444332 22377889999999999875 47899999999999
Q ss_pred eeeecC-cceEEEeeccCCCcccceeeEEecccccccccccccccccceEEeecCCce-eec--cCcEEEeecCCC-cEE
Q 000399 1332 SVAVGQ-DECTVFTAGIGPGFKGTVQKWELTRINCVSGYYGHEEVVNDICVLSSSGRI-ASC--DGTLHVWNSQTG-KLL 1406 (1566)
Q Consensus 1332 slafsp-d~~~LaSgS~~~~~D~tVrlWDl~tg~~i~tl~gH~~~V~sVafsp~g~~L-aSg--DgtIkLWDl~tg-~~l 1406 (1566)
..+|+| ..+.|+++|. |++.++||++.......+..|...+.|+.|+.-...+ +++ |+.|++||+++- .++
T Consensus 152 ~a~~sp~~~nlfas~Sg----d~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl 227 (311)
T KOG0277|consen 152 QAAFSPHIPNLFASASG----DGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPL 227 (311)
T ss_pred EEecCCCCCCeEEEccC----CceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccc
Confidence 999999 6789999998 9999999997543333488999999999999887765 666 999999999863 334
Q ss_pred EEeecccccccccCCCCCcccccccCCCCCCCCcccccccccccccchhHHHhhhhhccceEEEEecCceEEEEEccCC-
Q 000399 1407 SVFAEQSMDSLHGGSPSSSISKINTDQVGMLNSNTLSSGILSTAFDGNLYTCLHHIECVERLVVGIGNGSLRFIDINQG- 1485 (1566)
Q Consensus 1407 ~~l~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~svafsp~~~t~v~~~pdg~~L~sgs~DgtIrlWDi~tg- 1485 (1566)
..+ .+|+-.|..++|+|.. ...|++++.|=++||||...+
T Consensus 228 ~eL------------------------------~gh~~AVRkvk~Sph~---------~~lLaSasYDmT~riw~~~~~d 268 (311)
T KOG0277|consen 228 FEL------------------------------NGHGLAVRKVKFSPHH---------ASLLASASYDMTVRIWDPERQD 268 (311)
T ss_pred eee------------------------------cCCceEEEEEecCcch---------hhHhhhccccceEEecccccch
Confidence 433 3457779999999973 568999999999999999854
Q ss_pred ceeeeeccCCcccCchhhHHHhhccCCCcccCCCcccchhHHHhccCCCceeEEee
Q 000399 1486 QKLHLWRGEPTELGFPSLVSAICACGSEKMQAGGAVASPSWIAAGLSSGQCRLFDV 1541 (1566)
Q Consensus 1486 ~~l~~~~~h~~~v~~~~~V~sv~~s~~~~~~~~~~spdg~~LaSGs~Dg~I~lWD~ 1541 (1566)
.++.+... |+..|..+.++.- ++.++|+++.|+.++||+-
T Consensus 269 s~~e~~~~------HtEFv~g~Dws~~----------~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 269 SAIETVDH------HTEFVCGLDWSLF----------DPGQVASTGWDELLYVWNP 308 (311)
T ss_pred hhhhhhhc------cceEEeccccccc----------cCceeeecccccceeeecc
Confidence 34444443 4667777777643 3469999999999999983
Done!