Query 000399
Match_columns 1566
No_of_seqs 950 out of 7961
Neff 7.0
Searched_HMMs 29240
Date Tue Mar 26 16:42:57 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000399.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_178-182//hhsearch_pdb/000399hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1t77_A Lipopolysaccharide-resp 1.0 1 1 581.0 0.0 236 367-602 134-414 (414)
2 4b9d_A Serine/threonine-protei 1.0 1 1 390.5 -1.5 153 160-328 22-175 (350)
3 4b99_A Mitogen-activated prote 1.0 1 1 378.9 2.5 202 161-394 53-261 (398)
4 4fih_A Serine/threonine-protei 1.0 1 1 377.1 6.5 148 161-329 73-221 (346)
5 4fie_A Serine/threonine-protei 1.0 1 1 377.1 6.4 148 161-329 150-298 (423)
6 3hyh_A Carbon catabolite-derep 1.0 1 1 375.3 1.4 152 161-329 12-163 (275)
7 3v5w_A G-protein coupled recep 1.0 1 1 370.0 2.7 203 160-396 187-391 (689)
8 3uto_A Twitchin; kinase, muscl 1.0 1 1 358.3 4.4 201 159-395 154-355 (573)
9 3fpq_A Serine/threonine-protei 1.0 1 1 354.8 4.2 148 162-327 25-181 (290)
10 4f9c_A Cell division cycle 7-r 1.0 1 1 350.1 1.7 207 159-394 18-245 (361)
No 1
>1t77_A Lipopolysaccharide-responsive and beige-like anchor protein, CDC4-like protein; PH-beach domains, vesicle trafficking, signal transduction; 2.40A {Homo sapiens} SCOP: a.169.1.1 b.55.1.6 PDB: 1mi1_A
Probab=1.00 E-value=1 Score=580.98 Aligned_cols=236 Identities=34% Similarity=0.567 Sum_probs=210.4
Q ss_pred HHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECCEEE-EECCC-CCCCCCCCCCCCCCCCCCCCCCCC-CEEEEE
Q ss_conf 110011001346882133677731056557743201123567-40258-898878643234323221135884-100121
Q 000399 367 HSQFNRWWRGELSNFEYLLFLNKLAGRRWGDYTFHMVMPWVI-DFSTK-PDENFDSGSRDLSKSKWRLAKGDE-QLDFTY 443 (1566)
Q Consensus 367 ~~~~D~Ws~G~Isnf~yL~~ln~~agRs~~dl~q~pv~Pwvl-d~~~~-~~~~~~~~~rdL~kp~~~l~~~~~-~~~~~~ 443 (1566)
...+..|..|+||||+|||.||.+|||+++|++||||||||+ ||.++ +|+++|..||||+||||++++++. +++.+|
T Consensus 134 ~~~t~~W~~g~iSNFeYLm~LN~~aGRs~nDl~qYPVFPWVl~dy~s~~ldl~~~~~~RDLskpigaln~~r~~~~~~ry 213 (414)
T 1t77_A 134 SNMTQRWQHREISNFEYLMFLNTIAGRSYNDLNQYPVFPWVITNYESEELDLTLPTNFRDLSKPIGALNPKRAAFFAERY 213 (414)
T ss_dssp CSHHHHHHTTSSCHHHHHHHHHHHHTCCSSCGGGCCCBCCCBCCCSSSSCCTTCGGGBCCTTSCHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHH
T ss_conf 06778875387548999999998738876654558623605436766444667864404588753332987999999999
Q ss_pred EC----CCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH--CCCCCCCCHHHHHHHCC------CCCCCCCCCCCCC
Q ss_conf 04----788856607655321001123345523578776652--04899995345663024------9887667532482
Q 000399 444 SS----SEIPHHVSDECLSELAVCSYKARRLPLSVLRTAVRS--VYEPNEYPSTMQRLYQW------TPDECIPEFYCDP 511 (1566)
Q Consensus 444 ~~----~~~p~h~~~~~~s~~~v~~y~~r~~p~~~l~~~~~~--~~~~~~~~~~~~~~~~~------~~~EliPef~~~p 511 (1566)
.. ...|+||+++|+++++|++||+|++|||++++.+|+ ++.|++.+.+|.+.|++ |++|||||||++|
T Consensus 214 ~~~~~~~~~~f~ygshyS~~~~V~~yL~R~ePft~~~~~lq~g~fD~~dR~F~Si~~~w~~~~~~~~d~kElIPEFf~~P 293 (414)
T 1t77_A 214 ESWEDDQVPKFHYGTHYSTASFVLAWLLRIEPFTTYFLNLQGGKFDHADRTFSSISRAWRNSQRDTSDIKELIPEFYYLP 293 (414)
T ss_dssp HHCCCSSSCCCSBSSCSCCHHHHHHHHTTSTTHHHHHHHHHTSSCCCTTTSCCBHHHHHHHHHHCTTCCCCBCGGGGTCG
T ss_pred HHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHCCH
T ss_conf 75013689976558877788999998705785789999874697678761155699999987346898454492320583
Q ss_pred CHHHCCC----------CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 0010239----------999644458999993789998342210145310211258853100124320133343212589
Q 000399 512 QIFYSQH----------PGMTDLAVPPWAGSPEEFIKLHRDALESDRVSSRIHHWIDITFGYKMSGQAAIDAKNVMLPSS 581 (1566)
Q Consensus 512 ~~f~~~~----------~~~~dv~lP~Wa~~~~~Fi~~~r~aLEs~~Vs~~l~~WIDliFG~kq~g~~a~~a~Nvf~~~~ 581 (1566)
|||+|.| ..|+||+|||||+||++||++||+||||+|||+|||+||||||||||+|++|++|+|||||++
T Consensus 294 e~l~N~n~~~lG~~~~g~~v~DV~LP~Wa~sp~~FI~~~R~aLES~~VS~~Lh~WIDLiFGykq~G~~Av~a~Nvf~~lt 373 (414)
T 1t77_A 294 EMFVNFNNYNLGVMDDGTVVSDVELPPWAKTSEEFVHINRLALESEFVSCQLHQWIDLIFGYKQQGPEAVRALNVFYYLT 373 (414)
T ss_dssp GGGSCTTCCCCCBCTTSCBCSSCBCCTTCSSHHHHHHHHHHHHHSHHHHTTHHHHHHHHTSTTSSHHHHHHHTCCBCGGG
T ss_pred HHHCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCE
T ss_conf 76435567765646689877753679998998999999999971828664143443554074568988995579612200
Q ss_pred CCCC------------------CCCCC--CCCCCCCCCCCC
Q ss_conf 9999------------------74433--321234788744
Q 000399 582 EPTK------------------PKSVG--RLQLFTQPHPVR 602 (1566)
Q Consensus 582 ~~~~------------------~~~~g--~~qlf~~pHp~r 602 (1566)
++.. ..++| |.|||++|||+|
T Consensus 374 Y~~~vd~~~i~d~~~~~a~~~~i~~fGQ~P~QLF~~pHP~R 414 (414)
T 1t77_A 374 YEGAVNLNSITDPVLREAVEAQIRSFGQTPSQLLIEPHPPR 414 (414)
T ss_dssp STTSCCGGGCCSHHHHHHHHHHHHHHCCCCCCCCSSCCCCC
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCC
T ss_conf 06743423369878999999999976998346516899899
No 2
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=390.55 Aligned_cols=153 Identities=19% Similarity=0.157 Sum_probs=136.2
Q ss_pred HHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10012230255503135699997310267710001011133542144662211012021777878899987456998312
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
.+++|++++.||+|+||+||+|+++ .++..||+|++.+.........++. +|+.+|+.++|||||+
T Consensus 22 sme~Y~~~~~lG~G~fg~V~~a~~~------~~~~~vAiK~i~~~~~~~~~~~~~~--------~E~~il~~l~HpnIV~ 87 (350)
T 4b9d_A 22 SMEKYVRLQKIGEGSFGKAILVKST------EDGRQYVIKEINISRMSSKEREESR--------REVAVLANMKHPNIVQ 87 (350)
T ss_dssp CCCCEEEEEEC------CEEEEEET------TTCCEEEEEEEECTTSCHHHHHHHH--------HHHHHHHHCCCTTBCC
T ss_pred CCCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCHHHHHHHH--------HHHHHHHHCCCCCCCC
T ss_conf 5125588479702779399999988------9998999999865878979999999--------9999998779989891
Q ss_pred CCCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 00110135731230248864-22213014911112014789999999999998762255677756787210110012342
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iK 318 (1566)
+++++++++.+|||||||+| +|.++|...+...+++..++.|+.||+.||.|||++||+||||||+|||++.++ .+|
T Consensus 88 ~~~~~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g--~vK 165 (350)
T 4b9d_A 88 YRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDG--TVQ 165 (350)
T ss_dssp EEEEEEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTC--CEE
T ss_pred EEEEEEECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCC--CEE
T ss_conf 999999899999999488998399999973899997899999999999999999989915135978997987899--989
Q ss_pred HCCCCCCCCC
Q ss_conf 4076877765
Q 000399 319 ICDKPLVGFN 328 (1566)
Q Consensus 319 I~DFGla~~~ 328 (1566)
|+|||+|+..
T Consensus 166 l~DFGla~~~ 175 (350)
T 4b9d_A 166 LGDFGIARVL 175 (350)
T ss_dssp ECSTTEESCC
T ss_pred ECCCCCCEEE
T ss_conf 7646521440
No 3
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=378.94 Aligned_cols=202 Identities=21% Similarity=0.278 Sum_probs=165.3
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.++|++++.||+|+||.||+|+++ .++..||||++.+........+.++ +|+.+|+.++|||||++
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~------~t~~~vAiK~i~~~~~~~~~~~~~~--------~Ei~il~~l~HpnIv~l 118 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRR------LTGQQVAIKKIPNAFDVVTNAKRTL--------RELKILKHFKHDNIIAI 118 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEETTTTSSHHHHHHHH--------HHHHHHHHCCCTTBCCE
T ss_pred CCCEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEECCCCCCHHHHHHHH--------HHHHHHHHCCCCCCCEE
T ss_conf 897489889842608499999998------9998999999874003468899999--------99999986679995417
Q ss_pred CCCCCC------CCCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
Q ss_conf 011013------57312302488642221301491111201478999999999999876225567775678721011001
Q 000399 241 LGLLKT------SGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCW 314 (1566)
Q Consensus 241 ~~~~~~------~~~l~lV~E~~~gsL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~ 314 (1566)
++++.. .+.+|||||||+|+|.+++. ..+.+++..++.+++||+.||.|||++||+||||||+|||++.++
T Consensus 119 ~~~~~~~~~~~~~~~~~ivmE~~~g~L~~~i~--~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~- 195 (398)
T 4b99_A 119 KDILRPTVPYGEFKSVYVVLDLMESDLHQIIH--SSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENC- 195 (398)
T ss_dssp EEECCCSSCTTTCCCEEEEEECCSEEHHHHHT--SSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTC-
T ss_pred EEEEECCCCCCCCCEEEEEEECCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-
T ss_conf 65552035546688799998379998899998--659999999999999999999999988676787371335427888-
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCC-CHHHCCCCCCCCCCCCCHHHHHHHHHCCC
Q ss_conf 23424076877765565556899998122420598633332223336443-01110011001346882133677731056
Q 000399 315 SWLYICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGELSNFEYLLFLNKLAGR 393 (1566)
Q Consensus 315 ~~iKI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~-~y~~~~D~Ws~G~Isnf~yL~~ln~~agR 393 (1566)
.+||+|||+|+........ ......+.+||+.|||||++.+. .|+..+|+|+.|++ ++.++.|+
T Consensus 196 -~~Ki~DFGla~~~~~~~~~-------~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~i-------l~ell~G~ 260 (398)
T 4b99_A 196 -ELKIGDFGMARGLCTSPAE-------HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCI-------FGEMLARR 260 (398)
T ss_dssp -CEEECCCTTCBCC--------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHH-------HHHHHHTS
T ss_pred -CEEEEECCEEEECCCCCCC-------CCCCCCCCEECHHHCCHHHHCCCCCCCCHHHEEHHHHH-------HHHHHHCC
T ss_conf -7787221434213467545-------66665662558676487876278889972221116899-------99999788
Q ss_pred C
Q ss_conf 5
Q 000399 394 R 394 (1566)
Q Consensus 394 s 394 (1566)
.
T Consensus 261 ~ 261 (398)
T 4b99_A 261 Q 261 (398)
T ss_dssp C
T ss_pred C
T ss_conf 9
No 4
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=377.13 Aligned_cols=148 Identities=19% Similarity=0.166 Sum_probs=130.3
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
...|++.++||+|+||.||+|+++ .++..||||++..... .....+. +|+.+|+.++|||||++
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~------~tg~~vAiK~i~~~~~--~~~~~~~--------~Ei~il~~l~HpnIV~l 136 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVR------SSGKLVAVKKMDLRKQ--QRRELLF--------NEVVIMRDYQHENVVEM 136 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEEGGGC--SSGGGGH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHCEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEECCCH--HHHHHHH--------HHHHHHHHCCCCCCCCE
T ss_conf 575387079602728299999998------9998999999852765--6899999--------99999986799899919
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0110135731230248864-222130149111120147899999999999987622556777567872101100123424
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI 319 (1566)
+++|.+++.+|||||||+| +|.+++. .+.+++..++.++.||+.||.|||+++|+||||||+|||++.++ .+||
T Consensus 137 ~~~~~~~~~~~ivmEy~~gg~L~~~l~---~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g--~vKl 211 (346)
T 4fih_A 137 YNSYLVGDELWVVMEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG--RVKL 211 (346)
T ss_dssp EEEEEETTEEEEEECCCTTEEHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTC--CEEE
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHH---CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC--CEEE
T ss_conf 999998999999996989980899987---18989999999999999999999988835562788997887999--8899
Q ss_pred CCCCCCCCCC
Q ss_conf 0768777655
Q 000399 320 CDKPLVGFNS 329 (1566)
Q Consensus 320 ~DFGla~~~~ 329 (1566)
+|||+|+...
T Consensus 212 ~DFGla~~~~ 221 (346)
T 4fih_A 212 SDFGFCAQVS 221 (346)
T ss_dssp CCCTTCEECC
T ss_pred ECCCCCEECC
T ss_conf 0275753667
No 5
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=377.08 Aligned_cols=148 Identities=19% Similarity=0.166 Sum_probs=130.4
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
.+.|+++++||+|+||.||+|+++ .++..||||++..... .....+. +|+.+|+.++|||||++
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~------~tg~~vAiK~i~~~~~--~~~~~~~--------~Ei~il~~l~HpnIV~l 213 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVR------SSGKLVAVKKMDLRKQ--QRRELLF--------NEVVIMRDYQHENVVEM 213 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEET------TTCCEEEEEEEESTTC--SSGGGHH--------HHHHHHHHCCCTTBCCE
T ss_pred HHHCEEEEEECCCCCCEEEEEEEC------CCCCEEEEEEEECCCH--HHHHHHH--------HHHHHHHHCCCCCCCCE
T ss_conf 684386169624818489999999------9998999999862554--6899999--------99999985799898716
Q ss_pred CCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf 0110135731230248864-222130149111120147899999999999987622556777567872101100123424
Q 000399 241 LGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYI 319 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI 319 (1566)
+++|.+++.+|||||||+| +|.++++ .+.+++..++.+++||+.||.|||++|||||||||+|||++.++ .+||
T Consensus 214 ~~~~~~~~~~~iVmEy~~gG~L~~~i~---~~~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g--~vKl 288 (423)
T 4fie_A 214 YNSYLVGDELWVVMEFLEGGALTDIVT---HTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDG--RVKL 288 (423)
T ss_dssp EEEEEETTEEEEEEECCTTEEHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTC--CEEE
T ss_pred EEEEEECCEEEEEEECCCCCCHHHHHH---CCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCC--CEEE
T ss_conf 899998999999996989982898876---16989999999999999999999988904465787778985899--9898
Q ss_pred CCCCCCCCCC
Q ss_conf 0768777655
Q 000399 320 CDKPLVGFNS 329 (1566)
Q Consensus 320 ~DFGla~~~~ 329 (1566)
+|||+|+...
T Consensus 289 ~DFGla~~~~ 298 (423)
T 4fie_A 289 SDFGFCAQVS 298 (423)
T ss_dssp CCCTTCEECC
T ss_pred ECCCCCEECC
T ss_conf 0372654777
No 6
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=375.28 Aligned_cols=152 Identities=21% Similarity=0.244 Sum_probs=134.6
Q ss_pred HCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 00122302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 161 MTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 161 ~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
+++|++.+.||+|+||+||+|+++ .++..||+|++.+.........+.+. +|+.+|+.++|||||++
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~------~~~~~vAiK~i~~~~~~~~~~~~~~~-------~Ei~il~~l~HpnIv~~ 78 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHT------TTGQKVALKIINKKVLAKSDMQGRIE-------REISYLRLLRHPHIIKL 78 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECT------TTCCEEEEEEEECC------CHHHHH-------HHHHHHHHCCCTTBCCE
T ss_pred EECEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCCHHHHHHHH-------HHHHHHHHCCCCCCCEE
T ss_conf 338689999821768199999999------99989999998378867878999999-------99999987799899929
Q ss_pred CCCCCCCCCEEEECCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHC
Q ss_conf 01101357312302488642221301491111201478999999999999876225567775678721011001234240
Q 000399 241 LGLLKTSGLITSVIPKTPYTLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLYIC 320 (1566)
Q Consensus 241 ~~~~~~~~~l~lV~E~~~gsL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iKI~ 320 (1566)
++++++++.+|+|||||+|+|.+++. ..+.+++..++.+++|++.||.|||++||+||||||+|||++.++ .+||+
T Consensus 79 ~~~~~~~~~~~ivmEy~~g~L~~~l~--~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~--~vkl~ 154 (275)
T 3hyh_A 79 YDVIKSKDEIIMVIEYAGNELFDYIV--QRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHL--NVKIA 154 (275)
T ss_dssp EEEEECSSEEEEEEECCCEEHHHHHH--HSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTC--CEEEC
T ss_pred EEEEEECCEEEEEEECCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCC--CEEEE
T ss_conf 99999899899999278997899998--749999999999999999999999988930666875876887999--89994
Q ss_pred CCCCCCCCC
Q ss_conf 768777655
Q 000399 321 DKPLVGFNS 329 (1566)
Q Consensus 321 DFGla~~~~ 329 (1566)
|||+|+...
T Consensus 155 DFGla~~~~ 163 (275)
T 3hyh_A 155 DFGLSNIMT 163 (275)
T ss_dssp CSSCC----
T ss_pred ECCCCEECC
T ss_conf 547772667
No 7
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=370.03 Aligned_cols=203 Identities=14% Similarity=0.103 Sum_probs=168.7
Q ss_pred HHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 10012230255503135699997310267710001011133542144662211012021777878899987456998312
Q 000399 160 IMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAP 239 (1566)
Q Consensus 160 ~~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~ 239 (1566)
.+++|++++.||+|+||+||+|+++ .++..||+|++.+............. ...+++.++..++|||||+
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~------~tg~~~AiK~i~K~~i~~~~~~~~~~----~E~~~l~ll~~~~HP~IV~ 256 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKA------DTGKMYAMKCLDKKRIKMKQGETLAL----NERIMLSLVSTGDCPFIVC 256 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET------TTCCEEEEEEEEHHHHHHTTCHHHHH----HHHHHHHHHSSSCCTTBCC
T ss_pred CHHHEEEEEEEECCCCEEEEEEEEC------CCCCEEEEEEEEHHHCCHHHHHHHHH----HHHHHHHHHHHCCCCCEEE
T ss_conf 5689288889831648399999999------99989999997578825255689999----9999999996489998717
Q ss_pred CCCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf 00110135731230248864-22213014911112014789999999999998762255677756787210110012342
Q 000399 240 VLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWLY 318 (1566)
Q Consensus 240 l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~iK 318 (1566)
++++|++.+.+|+|||||+| +|.++|. +.+.+++..+++|+.||+.||.|||++|||||||||+|||++.+| ++|
T Consensus 257 l~~~f~~~~~lylVmEy~~GGdL~~~l~--~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G--~vK 332 (689)
T 3v5w_A 257 MSYAFHTPDKLSFILDLMNGGDLHYHLS--QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHG--HVR 332 (689)
T ss_dssp EEEEEECSSEEEEEECCCCSCBHHHHHH--HHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTS--CEE
T ss_pred EEEEEEECCEEEEEEECCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCC--CEE
T ss_conf 9999998998899994689982999998--669999999999999999999999978854168866875980899--889
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCC-CCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 40768777655655568999981224205986333322233364-4301110011001346882133677731056557
Q 000399 319 ICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQ-SMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRWG 396 (1566)
Q Consensus 319 I~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~-~~~y~~~~D~Ws~G~Isnf~yL~~ln~~agRs~~ 396 (1566)
|+|||+|+..... . ..+.+||+.|||||++. +..|+..+|+|+.|++ ++.+++|+++.
T Consensus 333 L~DFGlA~~~~~~-------~------~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvi-------lYEmLtG~~PF 391 (689)
T 3v5w_A 333 ISDLGLACDFSKK-------K------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCM-------LFKLLRGHSPF 391 (689)
T ss_dssp ECCCTTCEECSSC-------C------CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHH-------HHHHHHSSCTT
T ss_pred ECCCCEEEECCCC-------C------CCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHH-------HHHHHHCCCCC
T ss_conf 6456556663789-------8------7776578673188998479999959999999999-------99998687999
No 8
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=1.00 E-value=1 Score=358.26 Aligned_cols=201 Identities=13% Similarity=0.107 Sum_probs=166.9
Q ss_pred HHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 21001223025550313569999731026771000101113354214466221101202177787889998745699831
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVA 238 (1566)
Q Consensus 159 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV 238 (1566)
.++++|++++.||+|+||.||+|+++ .++..||+|.+.+.... ....+. +|+.+|+.++|||||
T Consensus 154 ~il~~Y~i~~~lG~G~fg~V~~~~~~------~tg~~~AiK~i~~~~~~--~~~~~~--------~Ei~il~~l~hpnIv 217 (573)
T 3uto_A 154 HVLDHYDIHEELGTGAFGVVHRVTER------ATGNNFAAKFVMTPHES--DKETVR--------KEIQTMSVLRHPTLV 217 (573)
T ss_dssp CGGGTEEEEEEEEEETTEEEEEEEET------TTCCEEEEEEEECCSHH--HHHHHH--------HHHHHHHHTCCTTBC
T ss_pred CCCCCCEEEEEEEECCCEEEEEEEEC------CCCCEEEEEEEECCCHH--HHHHHH--------HHHHHHHHCCCCCCC
T ss_conf 68536189889961648499999998------89989999999152420--599999--------999999868998989
Q ss_pred CCCCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf 200110135731230248864-2221301491111201478999999999999876225567775678721011001234
Q 000399 239 PVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDSCWSWL 317 (1566)
Q Consensus 239 ~l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~~~~~i 317 (1566)
+++++|.+.+.+|||||||+| +|.+++.. ..+.+++..++.+++||+.||.|||+++|+||||||+|||++.+....+
T Consensus 218 ~l~~~~~~~~~~~iv~E~~~gg~L~~~i~~-~~~~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~v 296 (573)
T 3uto_A 218 NLHDAFEDDNEMVMIYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNEL 296 (573)
T ss_dssp CEEEEEECSSEEEEEEECCCCCBHHHHHTC-TTSCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCE
T ss_pred EEEEEEEECCEEEEEEEECCCCCHHHHHHH-HCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHCCCCCCCCCCE
T ss_conf 499999989988999860699959999998-6799999999999999999999999889230568765512147888978
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 240768777655655568999981224205986333322233364430111001100134688213367773105655
Q 000399 318 YICDKPLVGFNSIADWCTIPTSPMIGCCIEGCSSQGLYADLKLSQSMDWHSQFNRWWRGELSNFEYLLFLNKLAGRRW 395 (1566)
Q Consensus 318 KI~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APEil~~~~y~~~~D~Ws~G~Isnf~yL~~ln~~agRs~ 395 (1566)
||+|||+|+..... .. ....+||+.|||||++.+..|+..+|+|+.|++ ++.+++|+++
T Consensus 297 Kl~DFG~a~~~~~~--------~~----~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvi-------lyeml~G~~P 355 (573)
T 3uto_A 297 KLIDFGLTAHLDPK--------QS----VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVL-------SYILLSGLSP 355 (573)
T ss_dssp EECCCSSCEECCTT--------SE----EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHH-------HHHHHHSCCS
T ss_pred EEEECCCEEECCCC--------CC----EEEEEECCCCCCHHHHCCCCCCCHHHHHHHHHH-------HHHHHHCCCC
T ss_conf 99406630685699--------82----323477945149999689998969999999999-------9999978799
No 9
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=1.00 E-value=1 Score=354.83 Aligned_cols=148 Identities=22% Similarity=0.198 Sum_probs=126.9
Q ss_pred CCC-CCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 012-2302555031356999973102677100010111335421446622110120217778788999874569983120
Q 000399 162 TAL-FPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCLRHPNVAPV 240 (1566)
Q Consensus 162 ~~y-~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l~HpNIV~l 240 (1566)
++| +..++||+|+||.||+|++. .++..||+|.+.+.........++. +|+.+|+.++|||||++
T Consensus 25 gr~~~~~~~iG~G~fg~Vy~a~~~------~~~~~vAiK~i~~~~~~~~~~~~~~--------~E~~il~~l~HpnIV~~ 90 (290)
T 3fpq_A 25 GRFLKFDIEIGRGSFKTVYKGLDT------ETTVEVAWCELQDRKLTKSERQRFK--------EEAEMLKGLQHPNIVRF 90 (290)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEET------TTCCEEEEEEEEGGGSCHHHHHHHH--------HHHHHHHTCCCTTBCCE
T ss_pred CCEEEEEEEEECCCCCEEEEEEEC------CCCEEEEEEEECHHHCCHHHHHHHH--------HHHHHHHHCCCCCCCCE
T ss_conf 836895069700738599999988------9990999999832547989999999--------99999986799899919
Q ss_pred CCCCCC----CCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CCCCCCCCCCCCCCC-C
Q ss_conf 011013----5731230248864-2221301491111201478999999999999876225--567775678721011-0
Q 000399 241 LGLLKT----SGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLG--IAHRSVCPSNVLLTD-S 312 (1566)
Q Consensus 241 ~~~~~~----~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~g--IiHrDLKP~NILl~~-~ 312 (1566)
+++|++ +..+|||||||+| +|.++++ +.+.+++..++.++.|++.||.|||+++ |+||||||+|||++. +
T Consensus 91 ~~~~~~~~~~~~~~~lvmEy~~gg~L~~~l~--~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~ 168 (290)
T 3fpq_A 91 YDSWESTVKGKKCIVLVTELMTSGTLKTYLK--RFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPT 168 (290)
T ss_dssp EEEEEEEETTEEEEEEEEECCCSCBHHHHHH--HHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTT
T ss_pred EEEEEECCCCCCEEEEEEECCCCCCHHHHHH--HCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHEEEECCC
T ss_conf 8899643678868999994879789999998--66999999999999999999999997799887164574266588899
Q ss_pred CHHHHHHCCCCCCCC
Q ss_conf 012342407687776
Q 000399 313 CWSWLYICDKPLVGF 327 (1566)
Q Consensus 313 ~~~~iKI~DFGla~~ 327 (1566)
+ .+||+|||+|+.
T Consensus 169 g--~vKl~DFGla~~ 181 (290)
T 3fpq_A 169 G--SVKIGDLGLATL 181 (290)
T ss_dssp S--CEEECCTTGGGG
T ss_pred C--CEEEEECCCCEE
T ss_conf 9--889972768876
No 10
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=1.00 E-value=1 Score=350.06 Aligned_cols=207 Identities=18% Similarity=0.155 Sum_probs=155.4
Q ss_pred HHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCC-CCCCC
Q ss_conf 21001223025550313569999731026771000101113354214466221101202177787889998745-69983
Q 000399 159 RIMTALFPIAFIGICSYSIFEELASNFLSGCLEDCVLGSLNLLIEGKASGQESKNFLRLIGVPSFDESSVPGCL-RHPNV 237 (1566)
Q Consensus 159 ~~~~~y~~~~~LG~G~fG~Vy~a~~~~~~g~~~~~~~vAiK~i~~~~~~~~~~~~~l~~~g~~~~rEi~iL~~l-~HpNI 237 (1566)
.+.++|++.+.||+|+||.||+|+++. ...++..||+|.+.+... ..+.. +|+.+|..+ +||||
T Consensus 18 ~l~~~Y~i~~~lG~G~fg~Vy~a~~~~---~~~~~~~vAiK~i~~~~~----~~~~~--------~E~~~l~~~~~h~nI 82 (361)
T 4f9c_A 18 QLSNVFKIEDKIGEGTFSSVYLATAQL---QVGPEEKIALKHLIPTSH----PIRIA--------AELQCLTVAGGQDNV 82 (361)
T ss_dssp GGGGTCEEEEEEEECSSEEEEEEEEEB---TTSCEEEEEEEEECTTSC----HHHHH--------HHHHHHHHTCSBTTB
T ss_pred CCCCCEEEEEEEECCCCCEEEEEEECC---CCCCCCEEEEEEECCCCC----HHHHH--------HHHHHHHHHCCCCCC
T ss_conf 756827998998226181999999716---689897899999756667----99999--------999999971599987
Q ss_pred CCCCCCCCCCCCEEEECCCCCC-CHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC-CHH
Q ss_conf 1200110135731230248864-22213014911112014789999999999998762255677756787210110-012
Q 000399 238 APVLGLLKTSGLITSVIPKTPY-TLENILQFSPNALKSEWHVRFLMYQLLSAIAYLHSLGIAHRSVCPSNVLLTDS-CWS 315 (1566)
Q Consensus 238 V~l~~~~~~~~~l~lV~E~~~g-sL~~~l~~~~~~~~~~~~~~~i~~Qil~aL~yLH~~gIiHrDLKP~NILl~~~-~~~ 315 (1566)
|+++++|.+.+++|+|||||+| +|.++++ .+++..++.+++|++.||.|||++||+||||||+|||++.+ +
T Consensus 83 v~l~~~~~~~~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~-- 155 (361)
T 4f9c_A 83 MGVKYCFRKNDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLK-- 155 (361)
T ss_dssp CCCSEEEEETTEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTT--
T ss_pred CEEEEEEEECCEEEEEEECCCCCCHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEEECCCC--
T ss_conf 669999998999999993788521999872-----8999999999999999999999789175758779968858999--
Q ss_pred HHHHCCCCCCCCCCCCCCCCC----C-------C--C----CCEEEEECCCCCCCCCCCCCCCCCC-CHHHCCCCCCCCC
Q ss_conf 342407687776556555689----9-------9--9----8122420598633332223336443-0111001100134
Q 000399 316 WLYICDKPLVGFNSIADWCTI----P-------T--S----PMIGCCIEGCSSQGLYADLKLSQSM-DWHSQFNRWWRGE 377 (1566)
Q Consensus 316 ~iKI~DFGla~~~~~~~~~~~----~-------~--~----~~~~~~~~~~~gt~~Y~APEil~~~-~y~~~~D~Ws~G~ 377 (1566)
.+||+|||+|+.......... . . . ..........+||+.|+|||++.+. .|+..+|+|+.|+
T Consensus 156 ~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~ 235 (361)
T 4f9c_A 156 KYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGV 235 (361)
T ss_dssp EEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHH
T ss_pred EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHH
T ss_conf 18977677774367765321222333332233444544322356541146556733269899808999898210454299
Q ss_pred CCCCHHHHHHHHHCCCC
Q ss_conf 68821336777310565
Q 000399 378 LSNFEYLLFLNKLAGRR 394 (1566)
Q Consensus 378 Isnf~yL~~ln~~agRs 394 (1566)
+ .+.+++|+.
T Consensus 236 i-------l~ell~G~~ 245 (361)
T 4f9c_A 236 I-------FLSLLSGRY 245 (361)
T ss_dssp H-------HHHHHHTCS
T ss_pred H-------HHHHHHCCC
T ss_conf 9-------999997889
Done!