BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000403
(1563 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255586806|ref|XP_002534017.1| conserved hypothetical protein [Ricinus communis]
gi|223525976|gb|EEF28365.1| conserved hypothetical protein [Ricinus communis]
Length = 1613
Score = 2635 bits (6831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1328/1620 (81%), Positives = 1434/1620 (88%), Gaps = 64/1620 (3%)
Query: 1 MDQNQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKT 60
MDQNQ SI A TA+S R YQF PARAAIIDLFNLYLGRSSRQK DDS R+PPNKT
Sbjct: 1 MDQNQR---SIAATTAAS---RGYQFQPARAAIIDLFNLYLGRSSRQKHDDSTREPPNKT 54
Query: 61 QKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAEFI 120
QKRVLALNRELPPRNEQFLI+FEQLQSQFPDQDQLRSVTESVLIS+V+QCC+H PRAEF+
Sbjct: 55 QKRVLALNRELPPRNEQFLINFEQLQSQFPDQDQLRSVTESVLISLVIQCCNHAPRAEFL 114
Query: 121 LFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTSSGI 180
LFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQ Q + A+S+ + Q+ +LP+SS I
Sbjct: 115 LFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQAGQTVSAISSMNSSQNVILPSSSAI 174
Query: 181 PNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTRVNSS- 239
PNSSN+Q SNP SPL SVHGIGSP QSAIE S+ A +SPVKSSD+S GQ T+RVN S
Sbjct: 175 PNSSNFQPSNPTSPLASVHGIGSPVQSAIEPSLLATVSPVKSSDISGNGQPSTSRVNLSS 234
Query: 240 -----------------------------------------------QGIDESDG-KSWR 251
G+DESD +SWR
Sbjct: 235 RDNAINSLRQLCCKIILTGLEFNLKPATHSEIFHHMLNWLVNWDQRQHGVDESDSVRSWR 294
Query: 252 LDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRR 311
+KALIEWL SCLDVIWLLVDE++CRVPFYELLR+GLQFIENIPDDEALFTLILEIHRRR
Sbjct: 295 PEKALIEWLRSCLDVIWLLVDENKCRVPFYELLRSGLQFIENIPDDEALFTLILEIHRRR 354
Query: 312 DMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDL 371
DMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAA NLRYSPITYPSVLGEPLHGEDL
Sbjct: 355 DMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAANLRYSPITYPSVLGEPLHGEDL 414
Query: 372 ATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQGPTPGAVFTYDMIS 431
A SIQRGSLDWERA+RCIRHA+R TPSPDWWKRVLLVAP YRNPA GPTPGAVF MI
Sbjct: 415 ANSIQRGSLDWERALRCIRHALRTTPSPDWWKRVLLVAPSYRNPAHGPTPGAVFVSSMIC 474
Query: 432 EAVIDRIVELLKLTNSEVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHI 491
EA IDRIVELLKLTNSEVNCW +WL+FSD+ FFL+KSGCIDFVDFVDKLV+RL +GD HI
Sbjct: 475 EATIDRIVELLKLTNSEVNCWQEWLVFSDILFFLMKSGCIDFVDFVDKLVARLTEGDQHI 534
Query: 492 LRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCTDPNNPQSILLDFIS 551
LRTNH+TWLLAQIIRVE+V+ AL +D+RKVETTRKI+SFHREDR +DPNNPQSILLDFIS
Sbjct: 535 LRTNHMTWLLAQIIRVEIVVNALTTDARKVETTRKIMSFHREDRSSDPNNPQSILLDFIS 594
Query: 552 SCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVS 611
SCQNLRIWSLNTSTREYLN+EQLQKGKQIDEWWR V+KGDRM+DYMNMDDRS+GMFWVVS
Sbjct: 595 SCQNLRIWSLNTSTREYLNSEQLQKGKQIDEWWRTVTKGDRMIDYMNMDDRSIGMFWVVS 654
Query: 612 YTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKL 671
YTM+QPACETV+NWLSSAGV+EL G+++ NERLMVMREVNPLP+SLL+G SLNLCLKL
Sbjct: 655 YTMSQPACETVVNWLSSAGVSEL-AGTSMQSNERLMVMREVNPLPISLLSGLSLNLCLKL 713
Query: 672 ALQMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVL 731
Q+EDS+F GQV+ SIAMVETY RL+L+APHSLFRS FSHLAQR PSLL+K GVT LV
Sbjct: 714 VFQLEDSLFAGQVIPSIAMVETYCRLLLIAPHSLFRSHFSHLAQRYPSLLSKPGVTLLVF 773
Query: 732 EIVNYRLLPLYR-----YQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQ 786
EIVNYRLLPLYR YQGK+K+LMYD+TKI+S LK KRGDHRV RLAENLCMNLILS
Sbjct: 774 EIVNYRLLPLYRQEHVEYQGKSKSLMYDVTKIVSTLKGKRGDHRVFRLAENLCMNLILSL 833
Query: 787 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHT 846
RDFFS+KREGKG TEFTETLNR+TVI LAIIIKTRGIADADH+LYLQTMLEQIMATSQHT
Sbjct: 834 RDFFSVKREGKGPTEFTETLNRVTVITLAIIIKTRGIADADHLLYLQTMLEQIMATSQHT 893
Query: 847 WSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLS 906
WSEKTLRYFPSLL DAL GRIDKRGL IQ WQQ ETTVINQCTQLLSPSA+P YV TY++
Sbjct: 894 WSEKTLRYFPSLLHDALSGRIDKRGLAIQEWQQTETTVINQCTQLLSPSAEPAYVMTYIN 953
Query: 907 HSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVE 966
HSFPQHRQYLCAGAWILMQGHPENINS NL RVLREFSPEEVTSNIYTMVDVLLH I +E
Sbjct: 954 HSFPQHRQYLCAGAWILMQGHPENINSVNLARVLREFSPEEVTSNIYTMVDVLLHRIQME 1013
Query: 967 LQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLDRQELQ 1026
LQ GHSLQDLL K CAN++FFV HELLPLDILLLAL DRDDDPHALRIVI+LLDRQELQ
Sbjct: 1014 LQHGHSLQDLLLKTCANLAFFVWGHELLPLDILLLALTDRDDDPHALRIVISLLDRQELQ 1073
Query: 1027 QRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIV 1086
QRVKL+CMNRGPPEHWL+SG+FKR+ELQKALGNHLSWK+RYPTFFDDIAARLLPVIPLIV
Sbjct: 1074 QRVKLFCMNRGPPEHWLFSGVFKRLELQKALGNHLSWKDRYPTFFDDIAARLLPVIPLIV 1133
Query: 1087 YRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLSK 1146
YRL+ENDA+D ADRVLA YS FLAY+PLRF+FVRDILAYFYGHLPGKLIVRILNV DLSK
Sbjct: 1134 YRLVENDAIDPADRVLAMYSPFLAYHPLRFTFVRDILAYFYGHLPGKLIVRILNVLDLSK 1193
Query: 1147 IPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA---SLRAP 1203
IPFSESFPQHISSSNPVMCPP +YFATLLLGLVNNV+P LN NSK GS D SLR P
Sbjct: 1194 IPFSESFPQHISSSNPVMCPPPEYFATLLLGLVNNVLPPLNTNSKYGSLGDGLCNSLRNP 1253
Query: 1204 HNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQI 1263
+ K+P TSQSGP+N+S+ +K FYQ QDPGTYTQLVLETAVIE+LSLPV+ASQIVSSLVQI
Sbjct: 1254 NTKTPATSQSGPTNISDAQKAFYQIQDPGTYTQLVLETAVIELLSLPVTASQIVSSLVQI 1313
Query: 1264 VVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSR 1323
VVNIQPTLIQ+SNG +GASN GQGSVLPTSPSGGSTDSLGASRS PSVSGINT++FVSR
Sbjct: 1314 VVNIQPTLIQSSNGLHGASNGAGQGSVLPTSPSGGSTDSLGASRSNPSVSGINTATFVSR 1373
Query: 1324 SGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVG 1383
SGYTCQQLSCLLIQACGLLLAQLPPDFH+QLYMEASRIIKESWWL D KRSLGELDSAVG
Sbjct: 1374 SGYTCQQLSCLLIQACGLLLAQLPPDFHLQLYMEASRIIKESWWLTDAKRSLGELDSAVG 1433
Query: 1384 YALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVF 1443
YALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTH I+KHLRPITSVAMLRI F
Sbjct: 1434 YALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHAIVKHLRPITSVAMLRIAF 1493
Query: 1444 RIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFLHHVVHY 1503
RIMGPLLPRL NAH+LFNKTL LLLNTM DV+G+N+ P PVEASEIADLIDFLHHV+HY
Sbjct: 1494 RIMGPLLPRLANAHSLFNKTLLLLLNTMVDVFGRNSQPSTPVEASEIADLIDFLHHVIHY 1553
Query: 1504 EGQGGPVQASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNPS 1563
EGQGGPVQA+SKPR EVL L GRAAESLRP++QHLLSHLKPDVNSSIYAATHPK+VQNPS
Sbjct: 1554 EGQGGPVQANSKPRAEVLALCGRAAESLRPDIQHLLSHLKPDVNSSIYAATHPKLVQNPS 1613
>gi|356530772|ref|XP_003533954.1| PREDICTED: uncharacterized protein LOC100798789 [Glycine max]
Length = 1615
Score = 2561 bits (6638), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1262/1619 (77%), Positives = 1402/1619 (86%), Gaps = 60/1619 (3%)
Query: 1 MDQNQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLG--RSSRQKQDDSIRDPPN 58
MDQ+Q+QR AT+++ SR++QFHP R I DLFNLYLG R+SRQK DDS+RDPPN
Sbjct: 1 MDQSQNQR----PATSTTTPSRSFQFHPLRVPIFDLFNLYLGLGRNSRQKPDDSLRDPPN 56
Query: 59 KTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAE 118
KTQKRV ALNRELPP NEQF++DFEQLQSQ DQDQLRSVTE++LIS+VVQC H PRA+
Sbjct: 57 KTQKRVHALNRELPPPNEQFILDFEQLQSQCADQDQLRSVTEAILISLVVQCSGHGPRAD 116
Query: 119 FILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTSS 178
F+LF LRSLC IG INWD+ LPSLLSSVSSAE+ GQ SQA+P VS++SL Q+GMLP S
Sbjct: 117 FLLFVLRSLCGIGCINWDSLLPSLLSSVSSAELPVGQLSQAVPTVSSSSLSQTGMLPPPS 176
Query: 179 GIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTR--- 235
I NSSN+QSSNPASPL SVH IGSPAQS +E CAAMSPVKSSD+S GQQ R
Sbjct: 177 TIANSSNFQSSNPASPLTSVHTIGSPAQSTMEPLSCAAMSPVKSSDISSAGQQSKLRGSP 236
Query: 236 -------VNSS----------------------------------------QGIDESDG- 247
NSS QGIDESD
Sbjct: 237 SVRTNDISNSSLRQLCCKIILTGLEFSLKPVTYAEIFNYMLNWLVNWDQRQQGIDESDVI 296
Query: 248 KSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEI 307
KSWR DKA+I WLHSCLDVIWLLVDE +CRVPFYELLR+ LQFIENIPDDEALFTLILEI
Sbjct: 297 KSWRPDKAVIAWLHSCLDVIWLLVDEGKCRVPFYELLRSDLQFIENIPDDEALFTLILEI 356
Query: 308 HRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLH 367
HRRRDMMAMHMQMLDQHLHCPTFGTHRIL+QT PN+S EA +LR SPITY SVLGEPLH
Sbjct: 357 HRRRDMMAMHMQMLDQHLHCPTFGTHRILNQTIPNVSGEAVAHLRLSPITYLSVLGEPLH 416
Query: 368 GEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQGPTPGAVFTY 427
GED+A+SIQ+GSLDWERA+RCIRHA+R TPSPDWW+RVL++APCYRN +QGPT GAVF+
Sbjct: 417 GEDIASSIQKGSLDWERAVRCIRHALRTTPSPDWWRRVLVLAPCYRNSSQGPTAGAVFSS 476
Query: 428 DMISEAVIDRIVELLKLTNSEVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDG 487
+MI EA IDRIVELLK+TNSE+NCW DWL+FSD+F+FL+KSGCIDFVDFVDKLVSRL +G
Sbjct: 477 EMICEATIDRIVELLKMTNSEINCWQDWLVFSDIFYFLIKSGCIDFVDFVDKLVSRLTEG 536
Query: 488 DNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCTDPNNPQSILL 547
D+HIL+TNHVTWLLAQIIR+ELVM ALNSD RKVETTRKILSFHREDR +DPNNPQSILL
Sbjct: 537 DHHILKTNHVTWLLAQIIRIELVMNALNSDPRKVETTRKILSFHREDRSSDPNNPQSILL 596
Query: 548 DFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMF 607
DF+SSCQNLRIWSLN+STREYLNNEQLQKGKQIDEWWRQ SKG+RMMDYMNMD+RS+GMF
Sbjct: 597 DFVSSCQNLRIWSLNSSTREYLNNEQLQKGKQIDEWWRQASKGERMMDYMNMDERSIGMF 656
Query: 608 WVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNL 667
WVV+YTMAQPACETVMNWL+SAGV +L PG+NL ERLM REV+PLPMSLL+GFS+NL
Sbjct: 657 WVVTYTMAQPACETVMNWLNSAGVADLLPGANLQQAERLMATREVSPLPMSLLSGFSINL 716
Query: 668 CLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVT 727
C+KL+ QMEDS+F GQV+ SIAMVETYTRL+LLAPHSLFRS F+HL QRNPSLL+K GVT
Sbjct: 717 CVKLSYQMEDSLFSGQVIPSIAMVETYTRLLLLAPHSLFRSHFNHLVQRNPSLLSKPGVT 776
Query: 728 PLVLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQR 787
LVLEI+NYRLLPLYRYQGK+K LMYD+TKIISA+K KRGDHRV RLAENLC+NLI S R
Sbjct: 777 LLVLEILNYRLLPLYRYQGKSKALMYDVTKIISAIKGKRGDHRVFRLAENLCLNLIFSLR 836
Query: 788 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTW 847
DFF +KREGKG TEFTETLNR+TVI LAI+IKTRGIADA+H+LYLQ MLEQIMATS HTW
Sbjct: 837 DFFLVKREGKGPTEFTETLNRVTVITLAILIKTRGIADAEHLLYLQNMLEQIMATSHHTW 896
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
SEKTL +FPS+LR+AL G+ DKR L IQ WQQAETTVI+QCTQLLSPSADP+YV TY+SH
Sbjct: 897 SEKTLHHFPSVLREALSGQTDKRSLAIQTWQQAETTVIHQCTQLLSPSADPSYVMTYISH 956
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
SFPQHRQYLCAGA ILM GH ENINS NL RVLREFSPEEVTSNIYTMVDVLLHH+ +EL
Sbjct: 957 SFPQHRQYLCAGALILMHGHAENINSGNLGRVLREFSPEEVTSNIYTMVDVLLHHMQIEL 1016
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLDRQELQQ 1027
Q+GHS QDL+ KACA+I+FFV T+ELLPLDILLLALIDRDDDPHALR+VI+LLDR ELQQ
Sbjct: 1017 QQGHSSQDLMLKACASIAFFVWTNELLPLDILLLALIDRDDDPHALRMVISLLDRPELQQ 1076
Query: 1028 RVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIVY 1087
RVK +CM RG PEHWLYSG+FKRVELQKALGNHL+WK+RYP FFDDIAARLLPVIPLI+Y
Sbjct: 1077 RVKHFCMTRGHPEHWLYSGIFKRVELQKALGNHLAWKDRYPVFFDDIAARLLPVIPLIIY 1136
Query: 1088 RLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLSKI 1147
RLIENDAMD+A+R+LA YS LAYYPLRF+FVRDILAYFYGHLPGKLIVRILNV D+SKI
Sbjct: 1137 RLIENDAMDTAERLLAMYSPLLAYYPLRFTFVRDILAYFYGHLPGKLIVRILNVLDISKI 1196
Query: 1148 PFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDAS---LRAPH 1204
PFSESFPQ IS +NPVMCPPLDYF TLLLG+VNNVIP L+ NSKSGS DAS LR
Sbjct: 1197 PFSESFPQQISLTNPVMCPPLDYFTTLLLGIVNNVIPPLHNNSKSGSMGDASSNTLRTAQ 1256
Query: 1205 NKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIV 1264
+K P SQSG +N SEG+K FYQ QDPGTYTQLVLETAVIEILSLP+SASQIV SLVQIV
Sbjct: 1257 SKPPAVSQSGSANASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPISASQIVQSLVQIV 1316
Query: 1265 VNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRS 1324
VNIQPTLIQ+SN +G SNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTS+F SRS
Sbjct: 1317 VNIQPTLIQSSNALHGGSNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSNFASRS 1376
Query: 1325 GYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGY 1384
GYTCQQLSCLLIQACGLLLAQLP DFH QLY+E +RIIKE+WWL DG RSLGE+DSAVGY
Sbjct: 1377 GYTCQQLSCLLIQACGLLLAQLPSDFHSQLYLETTRIIKENWWLKDGTRSLGEIDSAVGY 1436
Query: 1385 ALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFR 1444
ALLDPTWAAQDNTSTAIGN+VALLHSFFSNLPQEWLEGT+VIIK LRP+TSVAMLRI FR
Sbjct: 1437 ALLDPTWAAQDNTSTAIGNVVALLHSFFSNLPQEWLEGTNVIIKQLRPVTSVAMLRIAFR 1496
Query: 1445 IMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFLHHVVHYE 1504
+MGPLLP+L NAH LFNKTL+ LL + DV+GKN+ V+AS+IAD+IDFLHHVVHYE
Sbjct: 1497 VMGPLLPKLANAHALFNKTLSSLLTILVDVFGKNSQTSIAVDASDIADIIDFLHHVVHYE 1556
Query: 1505 GQGGPVQASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNPS 1563
GQGGPVQASSKPRPEVL L GRA+ESLRP++QHLLSHL PDVNSS+YAA HPK+ QNP+
Sbjct: 1557 GQGGPVQASSKPRPEVLALIGRASESLRPDIQHLLSHLNPDVNSSVYAAFHPKLAQNPT 1615
>gi|359472598|ref|XP_002281148.2| PREDICTED: uncharacterized protein LOC100262719 [Vitis vinifera]
Length = 1663
Score = 2473 bits (6409), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1246/1555 (80%), Positives = 1364/1555 (87%), Gaps = 53/1555 (3%)
Query: 58 NKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRA 117
NKTQKRV ALNRELPPRNEQFL+DF QLQSQF DQDQLRSVTES+LIS+VV C H PRA
Sbjct: 113 NKTQKRVTALNRELPPRNEQFLLDFGQLQSQFSDQDQLRSVTESILISLVVPCSGHAPRA 172
Query: 118 EFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTS 177
EF+LFALRSLCSIGYINWDTFLPSLLSSVSSAEMS GQG+QA+ +VS+TSL SGMLP+S
Sbjct: 173 EFLLFALRSLCSIGYINWDTFLPSLLSSVSSAEMSVGQGNQAVTSVSSTSLSPSGMLPSS 232
Query: 178 SGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTRVN 237
S I NSS +QSSNPASPLPSVHGI SPAQSA + S C A+SPVKSSD+SC+GQQ T RVN
Sbjct: 233 STIHNSSTFQSSNPASPLPSVHGISSPAQSATDPSPCVALSPVKSSDISCSGQQSTMRVN 292
Query: 238 SS------------------QGID---------------------------ESD-GKSWR 251
S+ G+D ESD KSWR
Sbjct: 293 STIRDNTLSCLRQLCCKIILTGLDFNLKPVTYAEIFNHMLNWLVNWDQRQQESDVAKSWR 352
Query: 252 LDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRR 311
DKALIEWLHSCLDVIWLLV+ED+CRVPFYELLR+GLQFIENIPDDEALFTLILEIHRRR
Sbjct: 353 PDKALIEWLHSCLDVIWLLVEEDKCRVPFYELLRSGLQFIENIPDDEALFTLILEIHRRR 412
Query: 312 DMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDL 371
DMMAMHMQMLDQHL CPTFGTHR LSQTT IS EA NLRYSPI YPSVLGEPLHGEDL
Sbjct: 413 DMMAMHMQMLDQHLQCPTFGTHRFLSQTTSPISGEAVANLRYSPIMYPSVLGEPLHGEDL 472
Query: 372 ATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQGPTPGAVFTYDMIS 431
A SIQRGSLDWERA+RCIRHA+R TPSPDWWKRVLLVAPCYR+ QGP+ GAVFT +MI
Sbjct: 473 ANSIQRGSLDWERALRCIRHALRTTPSPDWWKRVLLVAPCYRSHPQGPSAGAVFTSEMIC 532
Query: 432 EAVIDRIVELLKLTNSEVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHI 491
EA IDRIVELLKLTNS++NCW +WL+FSD+FFFL+K+GCIDFVDFVDKL+ RL +GDNHI
Sbjct: 533 EATIDRIVELLKLTNSDINCWQEWLVFSDIFFFLMKNGCIDFVDFVDKLILRLIEGDNHI 592
Query: 492 LRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCTDPNNPQSILLDFIS 551
LRTNHVTWLLAQIIRVELVM AL SD RK+ETTRKILSFH+EDR +DPNNPQSILLDFIS
Sbjct: 593 LRTNHVTWLLAQIIRVELVMNALTSDPRKMETTRKILSFHKEDRSSDPNNPQSILLDFIS 652
Query: 552 SCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVS 611
SCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWR +KG+RMMDY+ +DDRS+GMFWV+S
Sbjct: 653 SCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRLANKGERMMDYVTLDDRSIGMFWVMS 712
Query: 612 YTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKL 671
YTMAQPAC+TVMNW SSAG EL PGS+L NER+MVM+E++PLPMSLL+GFSL+LC+KL
Sbjct: 713 YTMAQPACDTVMNWFSSAGAAELIPGSHLQSNERVMVMKEISPLPMSLLSGFSLHLCMKL 772
Query: 672 ALQMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVL 731
A QMEDS+F GQVV SIA+VETYTRL+L+APHSLFRS FS R P++L+K G T LVL
Sbjct: 773 AFQMEDSLFSGQVVPSIALVETYTRLLLIAPHSLFRSHFS----RYPAILSKPGATLLVL 828
Query: 732 EIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFS 791
EI+NYRLLPLYRYQGK KTLMYD+TKI+SALK KRGDHR RLAENLCMNLILS RD F
Sbjct: 829 EILNYRLLPLYRYQGKGKTLMYDVTKIVSALKGKRGDHRAFRLAENLCMNLILSLRDPFQ 888
Query: 792 LKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKT 851
+K+EGKG TEFTETLNRIT+I LAIIIKTRGIA+ADH+ YLQTMLEQIMATSQHTWSEKT
Sbjct: 889 VKKEGKGPTEFTETLNRITIITLAIIIKTRGIAEADHLPYLQTMLEQIMATSQHTWSEKT 948
Query: 852 LRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQ 911
LRYFPSLLR+A+IGRIDK+ L IQAWQQAETTVI QCT LL S DP+YV TY+SHSFPQ
Sbjct: 949 LRYFPSLLREAMIGRIDKKNLAIQAWQQAETTVIAQCTNLLLSSGDPSYVMTYISHSFPQ 1008
Query: 912 HRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGH 971
HR+YLCA A +LM GHP+NIN ANL RVLREFSPEEVTSNIYTMVDVLLHHIH+ELQ GH
Sbjct: 1009 HRRYLCAAACMLMHGHPDNINVANLARVLREFSPEEVTSNIYTMVDVLLHHIHMELQHGH 1068
Query: 972 SLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLDRQELQQRVKL 1031
SLQDLL KACAN++FF+ T+ELLPLDILLLALIDRDDD HALRIVI+LLD+QELQQRVKL
Sbjct: 1069 SLQDLLSKACANLAFFIWTNELLPLDILLLALIDRDDDSHALRIVISLLDKQELQQRVKL 1128
Query: 1032 YCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIE 1091
+C NRG PEHWL SG+FKR +LQKALGNHLSWKERYP FFDD AARLLPVIPL+VYRLIE
Sbjct: 1129 FCNNRGSPEHWLCSGMFKRADLQKALGNHLSWKERYPVFFDDAAARLLPVIPLVVYRLIE 1188
Query: 1092 NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSE 1151
NDA D ADRVLA YS LAY+PLRF+FVRDILAYFYGHLPGKL VRILN+ DL KIPFSE
Sbjct: 1189 NDATDQADRVLAMYSQLLAYHPLRFTFVRDILAYFYGHLPGKLTVRILNILDLGKIPFSE 1248
Query: 1152 SFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDAS---LRAPHNKSP 1208
SF +H+SSSNPV+CPPLDYFATLLLGLVNNVIP +N NSKSGS D S LRAPHNK+P
Sbjct: 1249 SFLKHMSSSNPVICPPLDYFATLLLGLVNNVIPPINTNSKSGSMGDTSNNTLRAPHNKTP 1308
Query: 1209 MTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQ 1268
SQSGP+N SEG+K FYQ QDPGT+TQLVLETAVIEILSLPV A+QIVSSLVQI+V+IQ
Sbjct: 1309 AASQSGPTNASEGQKSFYQTQDPGTFTQLVLETAVIEILSLPVPATQIVSSLVQIIVHIQ 1368
Query: 1269 PTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTC 1328
TLIQ+SNG +G N VGQGSVLPTSPSGGSTDSL ASRS+ SVSGIN S+FVSRSGYTC
Sbjct: 1369 STLIQSSNGLHGPPNGVGQGSVLPTSPSGGSTDSLSASRSSASVSGINASNFVSRSGYTC 1428
Query: 1329 QQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLD 1388
QQLSCLLIQACGLLLAQLPPDFH QLY+EAS +IKESWWL DGKRSLGELDSAVGYALLD
Sbjct: 1429 QQLSCLLIQACGLLLAQLPPDFHKQLYIEASCLIKESWWLTDGKRSLGELDSAVGYALLD 1488
Query: 1389 PTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGP 1448
PTWAAQDNTSTAIGNIVALLH+FFSNLPQEWLEGTH+IIKHLRP+TSVAMLRI FRIMGP
Sbjct: 1489 PTWAAQDNTSTAIGNIVALLHAFFSNLPQEWLEGTHLIIKHLRPVTSVAMLRIAFRIMGP 1548
Query: 1449 LLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFLHHVVHYEGQGG 1508
LLPRL NAH+LFNKTL+LLLNTM DV+G+N+ P PVEASEIADLIDFLHH VHYEGQGG
Sbjct: 1549 LLPRLSNAHSLFNKTLSLLLNTMVDVFGRNSQPATPVEASEIADLIDFLHHAVHYEGQGG 1608
Query: 1509 PVQASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNPS 1563
PVQASSKPRPEVL L GRA+ESLRP++QHLLSHLK D+NSSIYAATHPK+VQNPS
Sbjct: 1609 PVQASSKPRPEVLALCGRASESLRPDIQHLLSHLKTDINSSIYAATHPKLVQNPS 1663
>gi|297737648|emb|CBI26849.3| unnamed protein product [Vitis vinifera]
Length = 1550
Score = 2430 bits (6297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1234/1593 (77%), Positives = 1353/1593 (84%), Gaps = 99/1593 (6%)
Query: 20 SSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKRVLALNRELPPRNEQFL 79
SSRAYQ HPAR++I+DLFNLYLGRSS QK +DS R+PPNKTQKRV ALNRELPPRNEQFL
Sbjct: 8 SSRAYQLHPARSSIVDLFNLYLGRSSHQKPEDSNREPPNKTQKRVTALNRELPPRNEQFL 67
Query: 80 IDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAEFILFALRSLCSIGYINWDTFL 139
+DF QLQSQF DQDQLRSVTES+LIS+VV C H PRAEF+LFALRSLCSIGYINWDTFL
Sbjct: 68 LDFGQLQSQFSDQDQLRSVTESILISLVVPCSGHAPRAEFLLFALRSLCSIGYINWDTFL 127
Query: 140 PSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTSSGIPNSSNYQSSNPASPLPSVH 199
PSLLSSVSSAEMS GQG+QA+ +VS+TSL SGMLP+SS I NSS +QSSNPASPLPSVH
Sbjct: 128 PSLLSSVSSAEMSVGQGNQAVTSVSSTSLSPSGMLPSSSTIHNSSTFQSSNPASPLPSVH 187
Query: 200 GIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTRVNSSQGIDESD-GKSWRLDKALIE 258
GI SPAQSA + S C A+SPVKSSD+SC+GQQ ESD KSWR DKALIE
Sbjct: 188 GISSPAQSATDPSPCVALSPVKSSDISCSGQQ----------QQESDVAKSWRPDKALIE 237
Query: 259 WLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDMMAMHM 318
WLHSCLDVIWL RRDMMAMHM
Sbjct: 238 WLHSCLDVIWL----------------------------------------RRDMMAMHM 257
Query: 319 QMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRG 378
QMLDQHL CPTFGTHR LSQTT IS EA NLRYSPI YPSVLGEPLHGEDLA SIQRG
Sbjct: 258 QMLDQHLQCPTFGTHRFLSQTTSPISGEAVANLRYSPIMYPSVLGEPLHGEDLANSIQRG 317
Query: 379 SLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQGPTPGAVFTYDMISEAVIDRI 438
SLDWERA+RCIRHA+R TPSPDWWKRVLLVAPCYR+ QGP+ GAVFT +MI EA IDRI
Sbjct: 318 SLDWERALRCIRHALRTTPSPDWWKRVLLVAPCYRSHPQGPSAGAVFTSEMICEATIDRI 377
Query: 439 VELLKLTNSEVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVT 498
VELLKLTNS++NCW +WL+FSD+FFFL+K+GCIDFVDFVDKL+ RL +GDNHILRTNHVT
Sbjct: 378 VELLKLTNSDINCWQEWLVFSDIFFFLMKNGCIDFVDFVDKLILRLIEGDNHILRTNHVT 437
Query: 499 WLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCTDPNNPQSILLDFISSCQNLRI 558
WLLAQIIRVELVM AL SD RK+ETTRKILSFH+EDR +DPNNPQSILLDFISSCQNLRI
Sbjct: 438 WLLAQIIRVELVMNALTSDPRKMETTRKILSFHKEDRSSDPNNPQSILLDFISSCQNLRI 497
Query: 559 WSLNTSTREYLNNEQLQKGKQIDEWWRQVSKG---------------------------- 590
WSLNTSTREYLNNEQLQKGKQIDEWWR +KG
Sbjct: 498 WSLNTSTREYLNNEQLQKGKQIDEWWRLANKGSSIGVATCTSGALLGGTTGVGSEGVAGS 557
Query: 591 -----------------DRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTE 633
+RMMDY+ +DDRS+GMFWV+SYTMAQPAC+TVMNW SSAG E
Sbjct: 558 FSGMGKTKVDSSTTTTGERMMDYVTLDDRSIGMFWVMSYTMAQPACDTVMNWFSSAGAAE 617
Query: 634 LFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVET 693
L PGS+L NER+MVM+E++PLPMSLL+GFSL+LC+KLA QMEDS+F GQVV SIA+VET
Sbjct: 618 LIPGSHLQSNERVMVMKEISPLPMSLLSGFSLHLCMKLAFQMEDSLFSGQVVPSIALVET 677
Query: 694 YTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMY 753
YTRL+L+APHSLFRS FSHL+QR P++L+K G T LVLEI+NYRLLPLYRYQGK KTLMY
Sbjct: 678 YTRLLLIAPHSLFRSHFSHLSQRYPAILSKPGATLLVLEILNYRLLPLYRYQGKGKTLMY 737
Query: 754 DITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIA 813
D+TKI+SALK KRGDHR RLAENLCMNLILS RD F +K+EGKG TEFTETLNRIT+I
Sbjct: 738 DVTKIVSALKGKRGDHRAFRLAENLCMNLILSLRDPFQVKKEGKGPTEFTETLNRITIIT 797
Query: 814 LAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLT 873
LAIIIKTRGIA+ADH+ YLQTMLEQIMATSQHTWSEKTLRYFPSLLR+A+IGRIDK+ L
Sbjct: 798 LAIIIKTRGIAEADHLPYLQTMLEQIMATSQHTWSEKTLRYFPSLLREAMIGRIDKKNLA 857
Query: 874 IQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINS 933
IQAWQQAETTVI QCT LL S DP+YV TY+SHSFPQHR+YLCA A +LM GHP+NIN
Sbjct: 858 IQAWQQAETTVIAQCTNLLLSSGDPSYVMTYISHSFPQHRRYLCAAACMLMHGHPDNINV 917
Query: 934 ANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHEL 993
ANL RVLREFSPEEVTSNIYTMVDVLLHHIH+ELQ GHSLQDLL KACAN++FF+ T+EL
Sbjct: 918 ANLARVLREFSPEEVTSNIYTMVDVLLHHIHMELQHGHSLQDLLSKACANLAFFIWTNEL 977
Query: 994 LPLDILLLALIDRDDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVEL 1053
LPLDILLLALIDRDDD HALRIVI+LLD+QELQQRVKL+C NRG PEHWL SG+FKR +L
Sbjct: 978 LPLDILLLALIDRDDDSHALRIVISLLDKQELQQRVKLFCNNRGSPEHWLCSGMFKRADL 1037
Query: 1054 QKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYP 1113
QKALGNHLSWKERYP FFDD AARLLPVIPL+VYRLIENDA D ADRVLA YS LAY+P
Sbjct: 1038 QKALGNHLSWKERYPVFFDDAAARLLPVIPLVVYRLIENDATDQADRVLAMYSQLLAYHP 1097
Query: 1114 LRFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFAT 1173
LRF+FVRDILAYFYGHLPGKL VRILN+ DL KIPFSESF +H+SSSNPV+CPPLDYFAT
Sbjct: 1098 LRFTFVRDILAYFYGHLPGKLTVRILNILDLGKIPFSESFLKHMSSSNPVICPPLDYFAT 1157
Query: 1174 LLLGLVNNVIPALNYNSKSGSTMDAS---LRAPHNKSPMTSQSGPSNVSEGRKEFYQNQD 1230
LLLGLVNNVIP +N NSKSGS D S LRAPHNK+P SQSGP+N SEG+K FYQ QD
Sbjct: 1158 LLLGLVNNVIPPINTNSKSGSMGDTSNNTLRAPHNKTPAASQSGPTNASEGQKSFYQTQD 1217
Query: 1231 PGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSV 1290
PGT+TQLVLETAVIEILSLPV A+QIVSSLVQI+V+IQ TLIQ+SNG +G N VGQGSV
Sbjct: 1218 PGTFTQLVLETAVIEILSLPVPATQIVSSLVQIIVHIQSTLIQSSNGLHGPPNGVGQGSV 1277
Query: 1291 LPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDF 1350
LPTSPSGGSTDSL ASRS+ SVSGIN S+FVSRSGYTCQQLSCLLIQACGLLLAQLPPDF
Sbjct: 1278 LPTSPSGGSTDSLSASRSSASVSGINASNFVSRSGYTCQQLSCLLIQACGLLLAQLPPDF 1337
Query: 1351 HMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHS 1410
H QLY+EAS +IKESWWL DGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLH+
Sbjct: 1338 HKQLYIEASCLIKESWWLTDGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHA 1397
Query: 1411 FFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNT 1470
FFSNLPQEWLEGTH+IIKHLRP+TSVAMLRI FRIMGPLLPRL NAH+LFNKTL+LLLNT
Sbjct: 1398 FFSNLPQEWLEGTHLIIKHLRPVTSVAMLRIAFRIMGPLLPRLSNAHSLFNKTLSLLLNT 1457
Query: 1471 MGDVYGKNTLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPEVLVLTGRAAES 1530
M DV+G+N+ P PVEASEIADLIDFLHH VHYEGQGGPVQASSKPRPEVL L GRA+ES
Sbjct: 1458 MVDVFGRNSQPATPVEASEIADLIDFLHHAVHYEGQGGPVQASSKPRPEVLALCGRASES 1517
Query: 1531 LRPEVQHLLSHLKPDVNSSIYAATHPKMVQNPS 1563
LRP++QHLLSHLK D+NSSIYAATHPK+VQNPS
Sbjct: 1518 LRPDIQHLLSHLKTDINSSIYAATHPKLVQNPS 1550
>gi|334182788|ref|NP_001185071.1| uncharacterized protein [Arabidopsis thaliana]
gi|332192239|gb|AEE30360.1| uncharacterized protein [Arabidopsis thaliana]
Length = 1592
Score = 2373 bits (6150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1165/1604 (72%), Positives = 1335/1604 (83%), Gaps = 75/1604 (4%)
Query: 4 NQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKR 63
+QSQR+ A+ +SSR+YQFHPARAAIIDLFNLYLGR SRQK D+S+RDPPNK+QKR
Sbjct: 2 DQSQRT----VAATPSSSRSYQFHPARAAIIDLFNLYLGRGSRQKPDESLRDPPNKSQKR 57
Query: 64 VLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAEFILFA 123
V A NR+LPPRNEQFL+DFE LQSQF D +QLR++TESVLIS+VVQC +H PRAEF+LFA
Sbjct: 58 VHAPNRDLPPRNEQFLLDFELLQSQFNDPEQLRTITESVLISLVVQCSNHAPRAEFLLFA 117
Query: 124 LRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTSSGIPNS 183
LR+LC I YINWDTFLPSLLSSVS+AE S QG QA A + +S S S
Sbjct: 118 LRTLCRISYINWDTFLPSLLSSVSAAEASLSQGVQAAAATAGSSATSS----------QS 167
Query: 184 SNYQSSNPASPLPSVHGIGSPAQSAIET-----SVCAAMSPVKSSDVSCTGQQFTTRVNS 238
S NP S LPS HGIGSP+ S +++ + A V+ + + + + VNS
Sbjct: 168 VVPVSVNPTSLLPSAHGIGSPSASEVKSVENGQQIARAGQIVRENAMRNSQRIRAAAVNS 227
Query: 239 SQ---------------------------------------GIDESDGKSWRLDKALIEW 259
+ G ++S GKSWR +K L EW
Sbjct: 228 LRQLSCKIILIGVESSLKPVTHAEIFQYMMNWLVNWDRRDLGTEDSVGKSWRSEKTLAEW 287
Query: 260 LHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQ 319
L SCLDVIWLLV+E R+PFYELLR+GLQFIENIPDDEALFTLI+EIHRRRD MAMHM
Sbjct: 288 LRSCLDVIWLLVEEGESRIPFYELLRSGLQFIENIPDDEALFTLIMEIHRRRDAMAMHML 347
Query: 320 MLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGS 379
MLDQHLHCP+FGTHRI+SQ T N+ EA +LR+SPITYPSVLGEPL+GEDLA SI +GS
Sbjct: 348 MLDQHLHCPSFGTHRIVSQITANVPPEAVPHLRHSPITYPSVLGEPLYGEDLAMSIPKGS 407
Query: 380 LDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQ-GPTPGAVFTYDMISEAVIDRI 438
LDWERA+RCIRHAIR TPSPDWWKRVL+VAPCYR Q GP PGAVFT DMI EA+IDRI
Sbjct: 408 LDWERAVRCIRHAIRTTPSPDWWKRVLVVAPCYRPSTQAGPIPGAVFTSDMICEAIIDRI 467
Query: 439 VELLKLTNSEVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVT 498
VELLKLTNS+ NCW +WL+FSD+FFFL+KSGC DFVDF+DKLV RL DNHILRTNHVT
Sbjct: 468 VELLKLTNSDANCWQEWLVFSDIFFFLIKSGCTDFVDFIDKLVLRLNGVDNHILRTNHVT 527
Query: 499 WLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCTDPNNPQSILLDFISSCQNLRI 558
WLLAQIIRVELVM ALNSD++KVETTRKILSFHREDR +DPNNPQS+LLDF+SSCQNLRI
Sbjct: 528 WLLAQIIRVELVMTALNSDAKKVETTRKILSFHREDRNSDPNNPQSVLLDFVSSCQNLRI 587
Query: 559 WSLNTSTREYLNNEQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPA 618
WSL+T+TR YLNNEQL KGKQIDEWWR SKG+RMMDYMNMDDRS+GMFWVVSYTMAQPA
Sbjct: 588 WSLSTTTRAYLNNEQLLKGKQIDEWWR--SKGERMMDYMNMDDRSIGMFWVVSYTMAQPA 645
Query: 619 CETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDS 678
CETV+NWLSSAG+ EL PG L PN+R+M+ +EV PLPMSLL+GFS+NLCLKLALQME++
Sbjct: 646 CETVINWLSSAGMAEL-PG--LQPNDRVMMTQEVTPLPMSLLSGFSMNLCLKLALQMEEA 702
Query: 679 IFGGQVVASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRL 738
+F QVV SIAMVETYTRL+L++PHS+FRS FS RN SLL+K GVT LVLEI+NYRL
Sbjct: 703 LFVSQVVPSIAMVETYTRLLLISPHSMFRSHFS----RNASLLSKPGVTLLVLEILNYRL 758
Query: 739 LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKG 798
LPLYRYQGK+KTLMYD+TKIISALK KRGDHR+ RLAENLCMNLILS RDFFS+KREGKG
Sbjct: 759 LPLYRYQGKSKTLMYDVTKIISALKGKRGDHRIFRLAENLCMNLILSLRDFFSVKREGKG 818
Query: 799 STEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSL 858
TEFTETLNRIT++ LAI IKTRGIAD DH++YLQTMLEQI+ATSQHTWSEKT+R+FPSL
Sbjct: 819 PTEFTETLNRITIMTLAITIKTRGIADPDHMVYLQTMLEQILATSQHTWSEKTMRHFPSL 878
Query: 859 LRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCA 918
LR+ L GR+DKRGL+IQAWQQAETTVINQCTQLLSPSA+P YV TYLSHSFPQHRQYLCA
Sbjct: 879 LRETLKGRVDKRGLSIQAWQQAETTVINQCTQLLSPSAEPAYVSTYLSHSFPQHRQYLCA 938
Query: 919 GAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLF 978
GA +LMQGH ENINS NL RVLRE SPEEVT+NIYT+VDVLLHH+HV+LQ+G SL+ +L
Sbjct: 939 GACLLMQGHAENINSTNLARVLREVSPEEVTANIYTLVDVLLHHVHVDLQQGQSLEAVLD 998
Query: 979 KACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLDRQELQQRVKLYCMNRGP 1038
KA AN++FF THE+LPLDI LLALIDRDDDPHAL I ++LL +L R+K YC NRG
Sbjct: 999 KAGANLAFFFWTHEMLPLDIFLLALIDRDDDPHALIIAMSLLKTPDLLLRIKNYCQNRGS 1058
Query: 1039 PEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSA 1098
PEHWL + +FKR ELQKALGNHLSWK+RYPTFFDDIAARLLPVIPL++YRLIEN+AM+ A
Sbjct: 1059 PEHWLVTQVFKRNELQKALGNHLSWKDRYPTFFDDIAARLLPVIPLVLYRLIENNAMEQA 1118
Query: 1099 DRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHIS 1158
D +L +S FLAY+PLRF+FVRDILAYFYGHLPGKL++R+L V DLSKIPFSESFPQ+IS
Sbjct: 1119 DNLLLAHSHFLAYHPLRFTFVRDILAYFYGHLPGKLVLRMLKVLDLSKIPFSESFPQYIS 1178
Query: 1159 SSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKS-------GSTMDASLRAPHNKSPMTS 1211
+ +CPPLDYFA+LLL LVNNVIP L+ +S +++S R PH K+P TS
Sbjct: 1179 PTGAPVCPPLDYFASLLLNLVNNVIPPLSSSSNCSSRSGSMADILNSSARPPHGKTPGTS 1238
Query: 1212 QSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTL 1271
Q GP+N SEG+K FYQ QDPGTYTQLVLETAVIEILSLPVSA+QIVSSLVQI+VNIQ TL
Sbjct: 1239 QPGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPVSAAQIVSSLVQIIVNIQSTL 1298
Query: 1272 IQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQL 1331
IQ+ NG +GA+N VGQGSVLPTSPSGGSTDS+ ASRST + GINT+SFVSRSGYTCQQL
Sbjct: 1299 IQSGNGFHGAANGVGQGSVLPTSPSGGSTDSMSASRSTCLIPGINTASFVSRSGYTCQQL 1358
Query: 1332 SCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTW 1391
SCLLIQACGLLLAQLPPDFH+QLY+EA+R+ +E+WWL DGKRS GELDSAVGYAL+DPTW
Sbjct: 1359 SCLLIQACGLLLAQLPPDFHVQLYLEAARVTRETWWLKDGKRSQGELDSAVGYALMDPTW 1418
Query: 1392 AAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLP 1451
AAQDNTSTAIGNIVALLH+FFSNLPQEWL+GT+ II +LRP+TSVAMLR+VFRIMGPLLP
Sbjct: 1419 AAQDNTSTAIGNIVALLHAFFSNLPQEWLDGTNAIITNLRPVTSVAMLRVVFRIMGPLLP 1478
Query: 1452 RLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQ 1511
RL + HTLFNKTL LLL+ + DV+GK APVEAS+IADLIDFLHH++HYEGQGG VQ
Sbjct: 1479 RLASTHTLFNKTLMLLLSALVDVFGKTAQTTAPVEASQIADLIDFLHHIIHYEGQGGAVQ 1538
Query: 1512 ASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATH 1555
SSKPRP++L L GRAAE+LRP+VQHLL+HLK + NSSIYAA H
Sbjct: 1539 TSSKPRPDILALIGRAAETLRPDVQHLLAHLKTNPNSSIYAAAH 1582
>gi|15220680|ref|NP_173737.1| uncharacterized protein [Arabidopsis thaliana]
gi|395406782|sp|F4I4P3.1|MED23_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit 23
gi|332192238|gb|AEE30359.1| uncharacterized protein [Arabidopsis thaliana]
Length = 1615
Score = 2372 bits (6147), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1168/1623 (71%), Positives = 1338/1623 (82%), Gaps = 90/1623 (5%)
Query: 4 NQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKR 63
+QSQR+ A+ +SSR+YQFHPARAAIIDLFNLYLGR SRQK D+S+RDPPNK+QKR
Sbjct: 2 DQSQRT----VAATPSSSRSYQFHPARAAIIDLFNLYLGRGSRQKPDESLRDPPNKSQKR 57
Query: 64 VLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAEFILFA 123
V A NR+LPPRNEQFL+DFE LQSQF D +QLR++TESVLIS+VVQC +H PRAEF+LFA
Sbjct: 58 VHAPNRDLPPRNEQFLLDFELLQSQFNDPEQLRTITESVLISLVVQCSNHAPRAEFLLFA 117
Query: 124 LRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTSSGIPNS 183
LR+LC I YINWDTFLPSLLSSVS+AE S QG QA A + +S S S
Sbjct: 118 LRTLCRISYINWDTFLPSLLSSVSAAEASLSQGVQAAAATAGSSATSS----------QS 167
Query: 184 SNYQSSNPASPLPSVHGIGSPAQSAIET-----SVCAAMSPVKSSDVSCTGQQFTTRVNS 238
S NP S LPS HGIGSP+ S +++ + A V+ + + + + VNS
Sbjct: 168 VVPVSVNPTSLLPSAHGIGSPSASEVKSVENGQQIARAGQIVRENAMRNSQRIRAAAVNS 227
Query: 239 SQ---------------------------------------GIDESDGKSWRLDKALIEW 259
+ G ++S GKSWR +K L EW
Sbjct: 228 LRQLSCKIILIGVESSLKPVTHAEIFQYMMNWLVNWDRRDLGTEDSVGKSWRSEKTLAEW 287
Query: 260 LHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQ 319
L SCLDVIWLLV+E R+PFYELLR+GLQFIENIPDDEALFTLI+EIHRRRD MAMHM
Sbjct: 288 LRSCLDVIWLLVEEGESRIPFYELLRSGLQFIENIPDDEALFTLIMEIHRRRDAMAMHML 347
Query: 320 MLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGS 379
MLDQHLHCP+FGTHRI+SQ T N+ EA +LR+SPITYPSVLGEPL+GEDLA SI +GS
Sbjct: 348 MLDQHLHCPSFGTHRIVSQITANVPPEAVPHLRHSPITYPSVLGEPLYGEDLAMSIPKGS 407
Query: 380 LDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQ-GPTPGAVFTYDMISEAVIDRI 438
LDWERA+RCIRHAIR TPSPDWWKRVL+VAPCYR Q GP PGAVFT DMI EA+IDRI
Sbjct: 408 LDWERAVRCIRHAIRTTPSPDWWKRVLVVAPCYRPSTQAGPIPGAVFTSDMICEAIIDRI 467
Query: 439 VELLKLTNS-------------------EVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDK 479
VELLKLTNS + NCW +WL+FSD+FFFL+KSGC DFVDF+DK
Sbjct: 468 VELLKLTNSGNDCFGIDLVSVTFPPLYADANCWQEWLVFSDIFFFLIKSGCTDFVDFIDK 527
Query: 480 LVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCTDP 539
LV RL DNHILRTNHVTWLLAQIIRVELVM ALNSD++KVETTRKILSFHREDR +DP
Sbjct: 528 LVLRLNGVDNHILRTNHVTWLLAQIIRVELVMTALNSDAKKVETTRKILSFHREDRNSDP 587
Query: 540 NNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSKGDRMMDYMNM 599
NNPQS+LLDF+SSCQNLRIWSL+T+TR YLNNEQL KGKQIDEWWR SKG+RMMDYMNM
Sbjct: 588 NNPQSVLLDFVSSCQNLRIWSLSTTTRAYLNNEQLLKGKQIDEWWR--SKGERMMDYMNM 645
Query: 600 DDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSL 659
DDRS+GMFWVVSYTMAQPACETV+NWLSSAG+ EL PG L PN+R+M+ +EV PLPMSL
Sbjct: 646 DDRSIGMFWVVSYTMAQPACETVINWLSSAGMAEL-PG--LQPNDRVMMTQEVTPLPMSL 702
Query: 660 LTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNPS 719
L+GFS+NLCLKLALQME+++F QVV SIAMVETYTRL+L++PHS+FRS FS LAQRN S
Sbjct: 703 LSGFSMNLCLKLALQMEEALFVSQVVPSIAMVETYTRLLLISPHSMFRSHFSQLAQRNAS 762
Query: 720 LLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLC 779
LL+K GVT LVLEI+NYRLLPLYRYQGK+KTLMYD+TKIISALK KRGDHR+ RLAENLC
Sbjct: 763 LLSKPGVTLLVLEILNYRLLPLYRYQGKSKTLMYDVTKIISALKGKRGDHRIFRLAENLC 822
Query: 780 MNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQI 839
MNLILS RDFFS+KREGKG TEFTETLNRIT++ LAI IKTRGIAD DH++YLQTMLEQI
Sbjct: 823 MNLILSLRDFFSVKREGKGPTEFTETLNRITIMTLAITIKTRGIADPDHMVYLQTMLEQI 882
Query: 840 MATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPT 899
+ATSQHTWSEKT+R+FPSLLR+ L GR+DKRGL+IQAWQQAETTVINQCTQLLSPSA+P
Sbjct: 883 LATSQHTWSEKTMRHFPSLLRETLKGRVDKRGLSIQAWQQAETTVINQCTQLLSPSAEPA 942
Query: 900 YVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVL 959
YV TYLSHSFPQHRQYLCAGA +LMQGH ENINS NL RVLRE SPEEVT+NIYT+VDVL
Sbjct: 943 YVSTYLSHSFPQHRQYLCAGACLLMQGHAENINSTNLARVLREVSPEEVTANIYTLVDVL 1002
Query: 960 LHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVITL 1019
LHH+HV+LQ+G SL+ +L KA AN++FF THE+LPLDI LLALIDRDDDPHAL I ++L
Sbjct: 1003 LHHVHVDLQQGQSLEAVLDKAGANLAFFFWTHEMLPLDIFLLALIDRDDDPHALIIAMSL 1062
Query: 1020 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARLL 1079
L +L R+K YC NRG PEHWL + +FKR ELQKALGNHLSWK+RYPTFFDDIAARLL
Sbjct: 1063 LKTPDLLLRIKNYCQNRGSPEHWLVTQVFKRNELQKALGNHLSWKDRYPTFFDDIAARLL 1122
Query: 1080 PVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRIL 1139
PVIPL++YRLIEN+AM+ AD +L +S FLAY+PLRF+FVRDILAYFYGHLPGKL++R+L
Sbjct: 1123 PVIPLVLYRLIENNAMEQADNLLLAHSHFLAYHPLRFTFVRDILAYFYGHLPGKLVLRML 1182
Query: 1140 NVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKS------- 1192
V DLSKIPFSESFPQ+IS + +CPPLDYFA+LLL LVNNVIP L+ +S
Sbjct: 1183 KVLDLSKIPFSESFPQYISPTGAPVCPPLDYFASLLLNLVNNVIPPLSSSSNCSSRSGSM 1242
Query: 1193 GSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVS 1252
+++S R PH K+P TSQ GP+N SEG+K FYQ QDPGTYTQLVLETAVIEILSLPVS
Sbjct: 1243 ADILNSSARPPHGKTPGTSQPGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPVS 1302
Query: 1253 ASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSV 1312
A+QIVSSLVQI+VNIQ TLIQ+ NG +GA+N VGQGSVLPTSPSGGSTDS+ ASRST +
Sbjct: 1303 AAQIVSSLVQIIVNIQSTLIQSGNGFHGAANGVGQGSVLPTSPSGGSTDSMSASRSTCLI 1362
Query: 1313 SGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGK 1372
GINT+SFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFH+QLY+EA+R+ +E+WWL DGK
Sbjct: 1363 PGINTASFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHVQLYLEAARVTRETWWLKDGK 1422
Query: 1373 RSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRP 1432
RS GELDSAVGYAL+DPTWAAQDNTSTAIGNIVALLH+FFSNLPQEWL+GT+ II +LRP
Sbjct: 1423 RSQGELDSAVGYALMDPTWAAQDNTSTAIGNIVALLHAFFSNLPQEWLDGTNAIITNLRP 1482
Query: 1433 ITSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIAD 1492
+TSVAMLR+VFRIMGPLLPRL + HTLFNKTL LLL+ + DV+GK APVEAS+IAD
Sbjct: 1483 VTSVAMLRVVFRIMGPLLPRLASTHTLFNKTLMLLLSALVDVFGKTAQTTAPVEASQIAD 1542
Query: 1493 LIDFLHHVVHYEGQGGPVQASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYA 1552
LIDFLHH++HYEGQGG VQ SSKPRP++L L GRAAE+LRP+VQHLL+HLK + NSSIYA
Sbjct: 1543 LIDFLHHIIHYEGQGGAVQTSSKPRPDILALIGRAAETLRPDVQHLLAHLKTNPNSSIYA 1602
Query: 1553 ATH 1555
A H
Sbjct: 1603 AAH 1605
>gi|297845394|ref|XP_002890578.1| hypothetical protein ARALYDRAFT_472581 [Arabidopsis lyrata subsp.
lyrata]
gi|297336420|gb|EFH66837.1| hypothetical protein ARALYDRAFT_472581 [Arabidopsis lyrata subsp.
lyrata]
Length = 1637
Score = 2369 bits (6140), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1176/1635 (71%), Positives = 1347/1635 (82%), Gaps = 92/1635 (5%)
Query: 4 NQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKR 63
+QSQR+ A+ +SSR+YQFHPARAAIIDLFNLYLGR SRQK D+S+RDPPNK+QKR
Sbjct: 2 DQSQRT----VAATPSSSRSYQFHPARAAIIDLFNLYLGRGSRQKPDESLRDPPNKSQKR 57
Query: 64 VLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAEFILFA 123
V A N +LPPRNEQF++DFEQLQSQF D +QLR++TESVLIS+VVQC +H PRAEF+LFA
Sbjct: 58 VHAPNGDLPPRNEQFILDFEQLQSQFNDPEQLRTITESVLISLVVQCSNHAPRAEFLLFA 117
Query: 124 LRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTSSG-IPN 182
LR+LC I YINWDTFLPSLLSSVS+AE S QG QA ++++ ++P S+ + +
Sbjct: 118 LRTLCRISYINWDTFLPSLLSSVSAAEASLSQGVQAAATAASSATSSQSLVPVSANPVSS 177
Query: 183 SSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSD------------------ 224
SSNY S+NP S LPS HGIGSP+ S E + VKS +
Sbjct: 178 SSNYHSTNPTSLLPSAHGIGSPSASGNEPGSLTTFAQVKSLENGQQIARAGQTVRENAMR 237
Query: 225 ---------------VSCT----GQQFTTR---------------VNSSQ---GIDESDG 247
+SC G +F+ + VN + G ++S G
Sbjct: 238 NSQRIRAAAINSLRQLSCKIILIGVEFSLKPVTHAEIFQYMLNWLVNWDRRDLGTEDSAG 297
Query: 248 KSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEI 307
SWR +K L EWL SCLDVIWLLV E R+PFYELLR+GLQFIENIPDDEALFTLI+EI
Sbjct: 298 TSWRSEKTLAEWLRSCLDVIWLLVKEVESRIPFYELLRSGLQFIENIPDDEALFTLIMEI 357
Query: 308 HRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLH 367
HRRRD MAMHM MLDQHLHCPTFGTHRI+SQ T N+S EA +LR+SPITYPSVLGEPL+
Sbjct: 358 HRRRDAMAMHMLMLDQHLHCPTFGTHRIVSQVTANVSAEAVQHLRHSPITYPSVLGEPLY 417
Query: 368 GEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQ-GPTPGAVFT 426
GEDLA I +GSLDWERA+RCIRHAIR TPSPDWWKRVL+VAPCYR Q GP PGAVFT
Sbjct: 418 GEDLAMFIPKGSLDWERAVRCIRHAIRTTPSPDWWKRVLVVAPCYRPSTQPGPIPGAVFT 477
Query: 427 YDMISEAVIDRIVELLKLTNS-------------------EVNCWHDWLIFSDVFFFLVK 467
DMI EA+IDRIVELLKLTNS + NCW +WL+FSD+FFFL+K
Sbjct: 478 SDMICEAIIDRIVELLKLTNSGNDCFGIDLVSVTFSPLYADANCWQEWLVFSDIFFFLIK 537
Query: 468 SGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKI 527
SGC DFVDF+DKLVSRL DNHILRTNHVTWLLAQIIRVELVM ALNSD++KVETTRKI
Sbjct: 538 SGCTDFVDFIDKLVSRLNGVDNHILRTNHVTWLLAQIIRVELVMTALNSDAKKVETTRKI 597
Query: 528 LSFHREDRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQV 587
LSFHREDR +DPNNPQS+LLDF+SSCQNLRIWSL+T+TR YLNNEQL KGKQIDEWWR
Sbjct: 598 LSFHREDRNSDPNNPQSVLLDFVSSCQNLRIWSLSTTTRAYLNNEQLLKGKQIDEWWR-- 655
Query: 588 SKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLM 647
SKG+RMMDYMNMDDRS+GMFWVVSYTMAQPACETV+NWLSSAG+ EL PG L PN+R+M
Sbjct: 656 SKGERMMDYMNMDDRSIGMFWVVSYTMAQPACETVINWLSSAGMAEL-PG--LQPNDRVM 712
Query: 648 VMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFR 707
+ +EV PLPMSLL+GFS+NLCLKLALQME+++F QVV SIAMVETYTRL+L++PHS+FR
Sbjct: 713 MTQEVTPLPMSLLSGFSMNLCLKLALQMEEALFVSQVVPSIAMVETYTRLLLISPHSMFR 772
Query: 708 SLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRG 767
S FS LAQRN SLL+K GVT LVLEI+NYRLLPLYRYQGK+KTLMYD+TKIISALK KRG
Sbjct: 773 SHFSQLAQRNASLLSKPGVTLLVLEILNYRLLPLYRYQGKSKTLMYDVTKIISALKGKRG 832
Query: 768 DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADAD 827
DHR+ RLAENLCMNLILS RDFFS+KREGKG TEFTETLNRIT++ LAI IKTRGIAD D
Sbjct: 833 DHRIFRLAENLCMNLILSLRDFFSVKREGKGPTEFTETLNRITIMTLAITIKTRGIADPD 892
Query: 828 HVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQ 887
H++YLQTMLEQI+ATSQHTWSEKT+R+FPSLLRD L R+DKRGL+IQAWQQAETTVINQ
Sbjct: 893 HLVYLQTMLEQILATSQHTWSEKTMRHFPSLLRDTLNVRVDKRGLSIQAWQQAETTVINQ 952
Query: 888 CTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEE 947
CTQLLSPSA+P YV TYLSHSFPQHRQYLCAGA +LMQGH ENINS NL RVLRE SPEE
Sbjct: 953 CTQLLSPSAEPAYVSTYLSHSFPQHRQYLCAGACLLMQGHAENINSTNLARVLREVSPEE 1012
Query: 948 VTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRD 1007
VT+NIYT+VDVLLHH+HV+LQ+G SL+ +L KA AN++FF THE+LPLDI LLALIDRD
Sbjct: 1013 VTANIYTLVDVLLHHVHVDLQQGQSLEAVLDKAGANLAFFFWTHEMLPLDIFLLALIDRD 1072
Query: 1008 DDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY 1067
DDPHAL I ++LL +L R+K YC NRG PEHWL + +FKR ELQKALGNHLSWK+RY
Sbjct: 1073 DDPHALIIAMSLLKTPDLLLRIKNYCQNRGSPEHWLVTQVFKRNELQKALGNHLSWKDRY 1132
Query: 1068 PTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFY 1127
PTFFDDIAARLLPVIPL+VYRLIEN+AM+ AD +L +S FLAY+PLRF+FVRDILAYFY
Sbjct: 1133 PTFFDDIAARLLPVIPLVVYRLIENNAMEQADNLLLAHSHFLAYHPLRFTFVRDILAYFY 1192
Query: 1128 GHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALN 1187
GHLPGKL++R+L V DLSKIPFSESFPQ+IS + +CPPLDYFA+LLL LVNNVIP L+
Sbjct: 1193 GHLPGKLVMRMLKVLDLSKIPFSESFPQYISPAGAAVCPPLDYFASLLLNLVNNVIPPLS 1252
Query: 1188 YNSKS-------GSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLE 1240
+S +++S R H K+P TSQ GP+N SEG+K FYQ QDPGTYTQLVLE
Sbjct: 1253 SSSNCSSRSGSMADILNSSARPLHGKTPGTSQPGPANASEGQKAFYQIQDPGTYTQLVLE 1312
Query: 1241 TAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGST 1300
TAVIEILSLPVSA+QIVSSLVQI+VNIQ TLIQ+ NG +GA+N VGQGSVLPTSPSGGST
Sbjct: 1313 TAVIEILSLPVSAAQIVSSLVQIIVNIQSTLIQSGNGFHGAANGVGQGSVLPTSPSGGST 1372
Query: 1301 DSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASR 1360
DS+ ASRST + GINT+SFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFH QLY+EA+R
Sbjct: 1373 DSMSASRSTCLIPGINTASFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHTQLYLEAAR 1432
Query: 1361 IIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWL 1420
+ +E+WWL DGKR+ GELDSAVGYAL+DPTWAAQDNTSTAIGNIVALLH+FFSNLPQEWL
Sbjct: 1433 VTRETWWLKDGKRAQGELDSAVGYALMDPTWAAQDNTSTAIGNIVALLHAFFSNLPQEWL 1492
Query: 1421 EGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTL 1480
+GT+ IIK+LRP+TSVAMLR+VFRIMGPLLPRL + HTLFNKTL LLL + DV+GKN
Sbjct: 1493 DGTNAIIKNLRPVTSVAMLRVVFRIMGPLLPRLASTHTLFNKTLTLLLTALVDVFGKNAQ 1552
Query: 1481 PPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPEVLVLTGRAAESLRPEVQHLLS 1540
APVEAS+IADLIDFLHH++HYEGQGG VQ SSKPRP++L L GRAA+SLRP+VQHLL+
Sbjct: 1553 TTAPVEASKIADLIDFLHHIIHYEGQGGAVQTSSKPRPDILALIGRAADSLRPDVQHLLA 1612
Query: 1541 HLKPDVNSSIYAATH 1555
HLK + NSSIYAA H
Sbjct: 1613 HLKTNPNSSIYAAAH 1627
>gi|9295691|gb|AAF86997.1|AC005292_6 F26F24.8 [Arabidopsis thaliana]
Length = 1583
Score = 2300 bits (5960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1143/1614 (70%), Positives = 1308/1614 (81%), Gaps = 104/1614 (6%)
Query: 4 NQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKR 63
+QSQR+ A+ +SSR+YQFHPARAAIIDLFNLYLGR SRQK D+S+RDPPNK+QKR
Sbjct: 2 DQSQRT----VAATPSSSRSYQFHPARAAIIDLFNLYLGRGSRQKPDESLRDPPNKSQKR 57
Query: 64 VLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAEFILFA 123
V A NR+LPPRNEQFL+DFE LQSQF +V +F
Sbjct: 58 VHAPNRDLPPRNEQFLLDFELLQSQF-----------------------NVKSRFLTIFI 94
Query: 124 LRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTSSGIPNS 183
+ SI YINWDTFLPSLLSSVS+AE S QG QA A + +S S S
Sbjct: 95 FLFVISISYINWDTFLPSLLSSVSAAEASLSQGVQAAAATAGSSATSS----------QS 144
Query: 184 SNYQSSNPASPLPSVHGIGSPAQSAIET-----SVCAAMSPVKSSDVSCTGQQFTTRVNS 238
S NP S LPS HGIGSP+ S +++ + A V+ + + + + VNS
Sbjct: 145 VVPVSVNPTSLLPSAHGIGSPSASEVKSVENGQQIARAGQIVRENAMRNSQRIRAAAVNS 204
Query: 239 SQ---------------------------------------GIDESDGKSWRLDKALIEW 259
+ G ++S GKSWR +K L EW
Sbjct: 205 LRQLSCKIILIGVESSLKPVTHAEIFQYMMNWLVNWDRRDLGTEDSVGKSWRSEKTLAEW 264
Query: 260 LHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQ 319
L SCLDVIWLLV+E R+PFYELLR+GLQFIENIPDDEALFTLI+EIHRRRD MAMHM
Sbjct: 265 LRSCLDVIWLLVEEGESRIPFYELLRSGLQFIENIPDDEALFTLIMEIHRRRDAMAMHML 324
Query: 320 MLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGS 379
MLDQHLHCP+FGTHRI+SQ T N+ EA +LR+SPITYPSVLGEPL+GEDLA SI +GS
Sbjct: 325 MLDQHLHCPSFGTHRIVSQITANVPPEAVPHLRHSPITYPSVLGEPLYGEDLAMSIPKGS 384
Query: 380 LDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQ-GPTPGAVFTYDMISEAVIDRI 438
LDWERA+RCIRHAIR TPSPDWWKRVL+VAPCYR Q GP PGAVFT DMI EA+IDRI
Sbjct: 385 LDWERAVRCIRHAIRTTPSPDWWKRVLVVAPCYRPSTQAGPIPGAVFTSDMICEAIIDRI 444
Query: 439 VELLKLTNSE---VNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTN 495
VELLKLTNS NCW +WL+FSD+FFFL+KSGC DFVDF+DKLV RL DNHILRTN
Sbjct: 445 VELLKLTNSGNVYANCWQEWLVFSDIFFFLIKSGCTDFVDFIDKLVLRLNGVDNHILRTN 504
Query: 496 HVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCTDPNNPQSILLDFISSCQN 555
HVTWLLAQIIRVELVM ALNSD++KVETTRKILSFHREDR +DPNNPQS+LLDF+SSCQN
Sbjct: 505 HVTWLLAQIIRVELVMTALNSDAKKVETTRKILSFHREDRNSDPNNPQSVLLDFVSSCQN 564
Query: 556 LRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMA 615
LRIWSL+T+TR YLNNEQL KGKQIDEWWR SKG+RMMDYMNMDDRS+GMFWVVSYTMA
Sbjct: 565 LRIWSLSTTTRAYLNNEQLLKGKQIDEWWR--SKGERMMDYMNMDDRSIGMFWVVSYTMA 622
Query: 616 QPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQM 675
QPACETV+NWLSSAG+ EL PG L PN+R+M+ +EV PLPMSLL+GFS+NLCLKLALQM
Sbjct: 623 QPACETVINWLSSAGMAEL-PG--LQPNDRVMMTQEVTPLPMSLLSGFSMNLCLKLALQM 679
Query: 676 EDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFS-------HLAQRNPSLLAKVGVTP 728
E+++F QVV SIAMVETYTRL+L++PHS+FRS FS LAQRN SLL+K GVT
Sbjct: 680 EEALFVSQVVPSIAMVETYTRLLLISPHSMFRSHFSVSYLVPSQLAQRNASLLSKPGVTL 739
Query: 729 LVLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRD 788
LVLEI+NYRLLPLYRYQGK+KTLMYD+TKIISALK KRGDHR+ RLAENLCMNLILS RD
Sbjct: 740 LVLEILNYRLLPLYRYQGKSKTLMYDVTKIISALKGKRGDHRIFRLAENLCMNLILSLRD 799
Query: 789 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWS 848
FFS+KREGKG TEFTETLNRIT++ LAI IKTRGIAD DH++YLQTMLEQI+ATSQHTWS
Sbjct: 800 FFSVKREGKGPTEFTETLNRITIMTLAITIKTRGIADPDHMVYLQTMLEQILATSQHTWS 859
Query: 849 EKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHS 908
EKT+R+FPSLLR+ L GR+DKRGL+IQAWQQAETTVINQCTQLLSPSA+P YV TYLSHS
Sbjct: 860 EKTMRHFPSLLRETLKGRVDKRGLSIQAWQQAETTVINQCTQLLSPSAEPAYVSTYLSHS 919
Query: 909 FPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQ 968
FPQHRQYLCAGA +LMQGH ENINS NL RVLRE SPEEVT+NIYT+VDVLLHH+HV+LQ
Sbjct: 920 FPQHRQYLCAGACLLMQGHAENINSTNLARVLREVSPEEVTANIYTLVDVLLHHVHVDLQ 979
Query: 969 RGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLDRQELQQR 1028
+G SL+ +L KA AN++FF THE+LPLDI LLALIDRDDDPHAL I ++LL +L R
Sbjct: 980 QGQSLEAVLDKAGANLAFFFWTHEMLPLDIFLLALIDRDDDPHALIIAMSLLKTPDLLLR 1039
Query: 1029 VKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYR 1088
+K YC NRG PEHWL + +FKR ELQKALGNHLSWK+RYPTFFDDIAARLLPVIPL++YR
Sbjct: 1040 IKNYCQNRGSPEHWLVTQVFKRNELQKALGNHLSWKDRYPTFFDDIAARLLPVIPLVLYR 1099
Query: 1089 LIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIP 1148
LIEN+AM+ AD +L +S FLAY+PLRF+FVRDILAYFYGHLPGKL++R+L V DLSKIP
Sbjct: 1100 LIENNAMEQADNLLLAHSHFLAYHPLRFTFVRDILAYFYGHLPGKLVLRMLKVLDLSKIP 1159
Query: 1149 FSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKS-------GSTMDASLR 1201
FSESFPQ+IS + +CPPLDYFA+LLL LVNNVIP L+ +S +++S R
Sbjct: 1160 FSESFPQYISPTGAPVCPPLDYFASLLLNLVNNVIPPLSSSSNCSSRSGSMADILNSSAR 1219
Query: 1202 APHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLV 1261
PH K+P TSQ GP+N SEG+K FYQ QDPGTYTQLVLETAVIEILSLPVSA+QIVSSLV
Sbjct: 1220 PPHGKTPGTSQPGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILSLPVSAAQIVSSLV 1279
Query: 1262 QIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSSFV 1321
QI+VNIQ TLIQ+ NG +GA+N VGQGSVLPTSPSGGSTDS+ ASRST + GINT+SFV
Sbjct: 1280 QIIVNIQSTLIQSGNGFHGAANGVGQGSVLPTSPSGGSTDSMSASRSTCLIPGINTASFV 1339
Query: 1322 SRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSA 1381
SRSGYTCQQLSCLLIQACGLLLAQLPPDFH+QLY+EA+R+ +E+WWL DGKRS GELDSA
Sbjct: 1340 SRSGYTCQQLSCLLIQACGLLLAQLPPDFHVQLYLEAARVTRETWWLKDGKRSQGELDSA 1399
Query: 1382 VGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRI 1441
VGYAL+DPTWAAQDNTSTAIGNIVALLH+FFSNLPQEWL+GT+ II +LRP+TSVAMLR+
Sbjct: 1400 VGYALMDPTWAAQDNTSTAIGNIVALLHAFFSNLPQEWLDGTNAIITNLRPVTSVAMLRV 1459
Query: 1442 VFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFLHHVV 1501
VFRIMGPLLPRL + HTLFNKTL LLL+ + DV+GK APVEAS+IADLIDFLHH++
Sbjct: 1460 VFRIMGPLLPRLASTHTLFNKTLMLLLSALVDVFGKTAQTTAPVEASQIADLIDFLHHII 1519
Query: 1502 HYEGQGGPVQASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATH 1555
HYEGQGG VQ SSKPRP++L L GRAAE+LRP+VQHLL+HLK + NSSIYAA H
Sbjct: 1520 HYEGQGGAVQTSSKPRPDILALIGRAAETLRPDVQHLLAHLKTNPNSSIYAAAH 1573
>gi|218191522|gb|EEC73949.1| hypothetical protein OsI_08822 [Oryza sativa Indica Group]
Length = 1565
Score = 2155 bits (5583), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1070/1585 (67%), Positives = 1285/1585 (81%), Gaps = 42/1585 (2%)
Query: 1 MDQNQSQRSSIGAATASSA---SSRAYQFH-----PARAAIIDLFNLYLGRSSRQKQDDS 52
MD QR + A ++SA R Q H PAR++I DLF LYLG +S+Q+ +D
Sbjct: 1 MDGAHGQRQPMSPAISASAVLPQQRQMQLHHHHHHPARSSIADLFTLYLGMNSKQRVEDP 60
Query: 53 IRDPPNKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCS 112
R+ NK QKRV A+NR+LPPR+EQF+ DFEQL QFPDQ+QL++VTESVLIS V+QC S
Sbjct: 61 TRETSNKLQKRVTAMNRDLPPRDEQFISDFEQLHMQFPDQEQLQAVTESVLISFVLQCSS 120
Query: 113 HVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQG---SQAMPAVSATSLQ 169
H P++EF+LFA R LC+ G++ WD+ LPSLL+ VSS E+ GQG + PA S++S
Sbjct: 121 HAPQSEFLLFATRCLCARGHLRWDSLLPSLLNVVSSVEVPMGQGVSVTTGGPATSSSS-- 178
Query: 170 QSGMLPTSSGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTG 229
+ +PN+ ++ SNP SPL +++ IGSP QS I+ + A +SP+K ++ S
Sbjct: 179 -------AIAVPNAPSFHPSNPTSPLSAMNTIGSPTQSGIDQPIGANVSPIKGAEFSSLD 231
Query: 230 QQFTTRVNSSQGIDESDG---KSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRT 286
G+D++D ++ RL++ L EW+H CLDVIW+LV+ED+CRVPFYEL+R+
Sbjct: 232 SL------RPHGVDQADALQLQTLRLERPLHEWMHLCLDVIWILVNEDKCRVPFYELVRS 285
Query: 287 GLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVE 346
LQF+ENIPDDEAL ++I+EIHRRRDM+ MHMQMLDQHLHCPTF THR LSQ+ P+I E
Sbjct: 286 NLQFLENIPDDEALVSIIMEIHRRRDMVCMHMQMLDQHLHCPTFATHRFLSQSYPSIVGE 345
Query: 347 AAGNLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVL 406
+ NLRYSPITYPSVLGEPLHGEDLA SI +G LDWERA+RC+RHA+R TPSPDWW+RVL
Sbjct: 346 SVANLRYSPITYPSVLGEPLHGEDLANSIPKGGLDWERALRCLRHALRTTPSPDWWRRVL 405
Query: 407 LVAPCYR-NPAQGPTPGAVFTYDMISEAVIDRIVELLKLTNSEVNCWHDWLIFSDVFFFL 465
LVAPCYR +P Q TPGAVF+ DMI EAV DR +ELL+LTNSE CW DWL+F+D+FFFL
Sbjct: 406 LVAPCYRQHPQQSSTPGAVFSPDMIGEAVADRTIELLRLTNSETQCWQDWLLFADIFFFL 465
Query: 466 VKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTR 525
+KSGCIDF+DFVDKL SR+ + D ILR+NHVTWLLAQIIR+E+VM L+SD RKVETTR
Sbjct: 466 MKSGCIDFLDFVDKLASRVTNSDQQILRSNHVTWLLAQIIRIEIVMNTLSSDPRKVETTR 525
Query: 526 KILSFHREDRCTDPNN--PQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEW 583
KI+SFH+ED+ DPNN PQSILLDFISS Q LRIWS NTS RE+LN++QLQKGKQIDEW
Sbjct: 526 KIISFHKEDKSLDPNNISPQSILLDFISSSQTLRIWSFNTSIREHLNSDQLQKGKQIDEW 585
Query: 584 WRQVSK--GDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLP 641
W+Q++K G+RM+D+ ++D+R++GMFWV+S+TMAQPACE VMNW +S GV +L G NL
Sbjct: 586 WKQMTKASGERMIDFTSLDERAMGMFWVLSFTMAQPACEAVMNWFTSVGVADLIQGPNLQ 645
Query: 642 PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLA 701
PNER+ +MRE PL MSLL+G S+NLCLKLA Q+E++IF GQ V SIA+VETY RL+L+
Sbjct: 646 PNERMTMMRETYPLSMSLLSGLSINLCLKLAFQLEETIFLGQNVPSIAIVETYVRLLLIT 705
Query: 702 PHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKIISA 761
PHSLFR F+ L QR+PS+L+K GV+ L+LEI+NYRLLPLYRY GK+K LMYD+TKIIS
Sbjct: 706 PHSLFRPHFTTLTQRSPSILSKSGVSLLLLEILNYRLLPLYRYHGKSKALMYDVTKIISM 765
Query: 762 LKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTR 821
+KVKRG+HR+ RLAENLCMNLILS RDFF +K+E KG TEFTETLNRIT+I+LAI +KTR
Sbjct: 766 IKVKRGEHRLFRLAENLCMNLILSLRDFFLVKKELKGPTEFTETLNRITIISLAITMKTR 825
Query: 822 GIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAE 881
GIA+ +H+++LQ +LEQIMATSQHTWSEKTLRYFP L+RD L+GR+DKRG IQAWQQAE
Sbjct: 826 GIAEVEHIIHLQPLLEQIMATSQHTWSEKTLRYFPPLIRDFLMGRMDKRGQAIQAWQQAE 885
Query: 882 TTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLR 941
TTVINQC QLLSPSA+PTYV TYLSHSFPQHRQYLCAGAW+LM GH E INSANL RVLR
Sbjct: 886 TTVINQCNQLLSPSAEPTYVMTYLSHSFPQHRQYLCAGAWMLMNGHLE-INSANLARVLR 944
Query: 942 EFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLL 1001
E SPEEVT+NIYTMVDVLLHHI +ELQRGH +QDLL KA N++FF+ THELLPLDILLL
Sbjct: 945 ELSPEEVTANIYTMVDVLLHHIQLELQRGHQIQDLLSKAITNLAFFIWTHELLPLDILLL 1004
Query: 1002 ALIDRDDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHL 1061
ALIDRDDDP+ALR+VI LL+R ELQQR+K +C +R PEHWL + KR+ELQKALGNHL
Sbjct: 1005 ALIDRDDDPYALRLVINLLERPELQQRIKAFCTSRS-PEHWLKNQPPKRIELQKALGNHL 1063
Query: 1062 SWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRD 1121
S KERYP FFDDIAARLL VIPLI+YRLIENDA D ADRVLA YS+FLA++PLRF+FVRD
Sbjct: 1064 SGKERYPPFFDDIAARLLLVIPLIIYRLIENDATDIADRVLAVYSTFLAFHPLRFTFVRD 1123
Query: 1122 ILAYFYGHLPGKLIVRILNVFDLS-KIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVN 1180
ILAYFYGHLP KLIVRILNV +S K PFSESF Q+++SSN +CPP +YFA LL GLVN
Sbjct: 1124 ILAYFYGHLPSKLIVRILNVLGVSTKTPFSESFAQYLASSNSSICPPPEYFANLLFGLVN 1183
Query: 1181 NVIPALNYNSKSGSTMDA--SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLV 1238
NVIP L+ SKS + A + R +NK P TS +G + S+G++ FYQNQDPG+YTQLV
Sbjct: 1184 NVIPPLSCKSKSNPSDAAGSTARTTYNK-PYTSSAGGISNSDGQRAFYQNQDPGSYTQLV 1242
Query: 1239 LETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGG 1298
LETA IEILSL V ASQIVSSLVQI+ ++Q LIQ+++G +G S +GQ S +PTS SGG
Sbjct: 1243 LETAAIEILSLCVPASQIVSSLVQIIAHVQAMLIQSNSG-HGMSGGLGQNSGVPTS-SGG 1300
Query: 1299 STDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEA 1358
+ +GA+R + SGIN S+FVSRSGY+CQQLS L+IQACGLLLAQLPP+FH LY EA
Sbjct: 1301 GVEPVGANRPNTTASGINASNFVSRSGYSCQQLSVLMIQACGLLLAQLPPEFHTLLYAEA 1360
Query: 1359 SRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQE 1418
+RIIK+ WWLAD R + ELDSAVGYALLDPTWA+QDNTSTAIGNIVALLHSFFSNLP E
Sbjct: 1361 ARIIKDCWWLADSSRPVKELDSAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPHE 1420
Query: 1419 WLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKN 1478
WLE TH +IKHLRP+ SVAMLRI FRI+GPLLPRL A LF KTLALL N +GDV+GKN
Sbjct: 1421 WLESTHTVIKHLRPVNSVAMLRIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKN 1480
Query: 1479 TLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPEVLVLTGRAAESLRPEVQHL 1538
+ PVEASEIAD+IDFLHH V YEGQGGPVQ++SKP+ E+L L G+ E LRP+VQHL
Sbjct: 1481 SQASPPVEASEIADIIDFLHHAVMYEGQGGPVQSTSKPKLEILTLCGKVMEILRPDVQHL 1540
Query: 1539 LSHLKPDVNSSIYAATHPKMVQNPS 1563
LSHLK D NSS+YAATHPK+VQNPS
Sbjct: 1541 LSHLKTDPNSSVYAATHPKLVQNPS 1565
>gi|115448499|ref|NP_001048029.1| Os02g0732700 [Oryza sativa Japonica Group]
gi|46390660|dbj|BAD16142.1| unknown protein [Oryza sativa Japonica Group]
gi|113537560|dbj|BAF09943.1| Os02g0732700 [Oryza sativa Japonica Group]
gi|222623623|gb|EEE57755.1| hypothetical protein OsJ_08276 [Oryza sativa Japonica Group]
Length = 1620
Score = 2149 bits (5568), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1078/1634 (65%), Positives = 1294/1634 (79%), Gaps = 85/1634 (5%)
Query: 1 MDQNQSQRSSIGAATASSA---SSRAYQFH-----PARAAIIDLFNLYLGRSSRQKQDDS 52
MD QR + A ++SA R Q H PAR++I DLF LYLG +S+Q+ +D
Sbjct: 1 MDGAHGQRQPMSPAISASAVLPQQRQMQLHHHHHHPARSSIADLFTLYLGMNSKQRVEDP 60
Query: 53 IRDPPNKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCS 112
R+ NK QKRV A+NR+LPPR+EQF+ DFEQL QFPDQ+QL++VTESVLIS V+QC S
Sbjct: 61 TRETSNKLQKRVTAMNRDLPPRDEQFISDFEQLHMQFPDQEQLQAVTESVLISFVLQCSS 120
Query: 113 HVPRAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQG---SQAMPAVSATSLQ 169
H P++EF+LFA R LC+ G++ WD+ LPSLL+ VSS E+ GQG + PA S++S
Sbjct: 121 HAPQSEFLLFATRCLCARGHLRWDSLLPSLLNVVSSVEVPMGQGVSVTTGGPATSSSS-- 178
Query: 170 QSGMLPTSSGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTG 229
+ +PN+ ++ SNP SPL +++ IGSP QS I+ + A +SP+K ++ S G
Sbjct: 179 -------AIAVPNAPSFHPSNPTSPLSAMNTIGSPTQSGIDQPIGANVSPIKGAEFSSPG 231
Query: 230 Q-QFTTRVNSSQ------------------------------------------------ 240
Q T R + S+
Sbjct: 232 QLGLTARGDQSRRGAEISYLHHLSCRIILAGLESDLKPATHAVIFQHMVNWLVNWDQRPH 291
Query: 241 GIDESDG---KSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDD 297
G+D++D ++ RL++ L EW+H CLDVIW+LV+ED+CRVPFYEL+R+ LQF+ENIPDD
Sbjct: 292 GVDQADALQLQTLRLERPLHEWMHLCLDVIWILVNEDKCRVPFYELVRSNLQFLENIPDD 351
Query: 298 EALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPIT 357
EAL ++I+EIHRRRDM+ MHMQMLDQHLHCPTF THR LSQ+ P+I+ E+ NLRYSPIT
Sbjct: 352 EALVSIIMEIHRRRDMVCMHMQMLDQHLHCPTFATHRFLSQSYPSIAGESVANLRYSPIT 411
Query: 358 YPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYR-NPA 416
YPSVLGEPLHGEDLA SI +G LDWERA+RC+RHA+R TPSPDWW+RVLLVAPCYR +P
Sbjct: 412 YPSVLGEPLHGEDLANSIPKGGLDWERALRCLRHALRTTPSPDWWRRVLLVAPCYRQHPQ 471
Query: 417 QGPTPGAVFTYDMISEAVIDRIVELLKLTNSEVNCWHDWLIFSDVFFFLVKSGCIDFVDF 476
Q TPGAVF+ DMI EAV DR +ELL+LTNSE CW DWL+F+D+FFFL+KSGCIDF+DF
Sbjct: 472 QSSTPGAVFSPDMIGEAVADRTIELLRLTNSETQCWQDWLLFADIFFFLMKSGCIDFLDF 531
Query: 477 VDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRC 536
VDKL SR+ + D ILR+NHVTWLLAQIIR+E+VM L+SD RKVETTRKI+SFH+ED+
Sbjct: 532 VDKLASRVTNSDQQILRSNHVTWLLAQIIRIEIVMNTLSSDPRKVETTRKIISFHKEDKS 591
Query: 537 TDPNN--PQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSK--GDR 592
DPNN PQSILLDFISS Q LRIWS NTS RE+LN++QLQKGKQIDEWWRQ++K G+R
Sbjct: 592 LDPNNISPQSILLDFISSSQTLRIWSFNTSIREHLNSDQLQKGKQIDEWWRQMTKASGER 651
Query: 593 MMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREV 652
M+D+ ++D+R++GMFWV+S+TMAQPACE VMNW +S GV +L G NL PNER+ +MRE
Sbjct: 652 MIDFTSLDERAMGMFWVLSFTMAQPACEAVMNWFTSVGVADLIQGPNLQPNERMTMMRET 711
Query: 653 NPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFSH 712
PL MSLL+G S+NLCLKLA Q+E++IF GQ V SIA+VETY RL+L+ PHSLFR F+
Sbjct: 712 YPLSMSLLSGLSINLCLKLAFQLEETIFLGQNVPSIAIVETYVRLLLITPHSLFRPHFTT 771
Query: 713 LAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVL 772
L QR+PS+L+K GV+ L+LEI+NYRLLPLYRY GK+K LMYD+TKIIS +KVKRG+HR+
Sbjct: 772 LTQRSPSILSKSGVSLLLLEILNYRLLPLYRYHGKSKALMYDVTKIISMIKVKRGEHRLF 831
Query: 773 RLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYL 832
RLAENLCMNLILS RDFF +K+E KG TEFTETLNRIT+I+LAI +KTRGIA+ +H+++L
Sbjct: 832 RLAENLCMNLILSLRDFFLVKKELKGPTEFTETLNRITIISLAITMKTRGIAEVEHIIHL 891
Query: 833 QTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLL 892
Q +LEQIMATSQHTWSEKTLRYFP L+RD L+GR+DKRG IQAWQQAETTVINQC QLL
Sbjct: 892 QPLLEQIMATSQHTWSEKTLRYFPPLIRDFLMGRMDKRGQAIQAWQQAETTVINQCNQLL 951
Query: 893 SPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNI 952
SPSA+PTYV TYLSHSFPQHRQYLCAGAW+LM GH E INSANL RVLREFSPEEVT+NI
Sbjct: 952 SPSAEPTYVMTYLSHSFPQHRQYLCAGAWMLMNGHLE-INSANLARVLREFSPEEVTANI 1010
Query: 953 YTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA 1012
YTMVDVLLHHI +ELQRGH +QDLL KA N++FF+ THELLPLDILLLALIDRDDDP+A
Sbjct: 1011 YTMVDVLLHHIQLELQRGHQIQDLLSKAITNLAFFIWTHELLPLDILLLALIDRDDDPYA 1070
Query: 1013 LRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFD 1072
LR+VI LL+R ELQQR+K +C +R PEHWL + KRVELQKALGNHLS KERYP FFD
Sbjct: 1071 LRLVINLLERPELQQRIKAFCTSRS-PEHWLKNQPPKRVELQKALGNHLSGKERYPPFFD 1129
Query: 1073 DIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPG 1132
DIAARLL VIPLI+YRLIENDA D ADRVLA YS+FLA++PLRF+FVRDILAYFYGHLP
Sbjct: 1130 DIAARLLLVIPLIIYRLIENDATDIADRVLAVYSTFLAFHPLRFTFVRDILAYFYGHLPS 1189
Query: 1133 KLIVRILNVFDLS-KIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSK 1191
KLIVRILNV +S K PFSESF Q+++SSN +CPP +YFA LL GLVNNVIP L+ SK
Sbjct: 1190 KLIVRILNVLGVSTKTPFSESFAQYLASSNSSICPPPEYFANLLFGLVNNVIPPLSCKSK 1249
Query: 1192 SGSTMDA--SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSL 1249
S + A + R +NK P TS +G + S+G++ FYQNQDPG+YTQLVLETA IEILSL
Sbjct: 1250 SNPSDAAGSTARTTYNK-PYTSSAGGISNSDGQRAFYQNQDPGSYTQLVLETAAIEILSL 1308
Query: 1250 PVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRST 1309
V ASQIVSSLVQI+ ++Q LIQ+++G +G S +GQ S +PTS SGG + +GA+R
Sbjct: 1309 CVPASQIVSSLVQIIAHVQAMLIQSNSG-HGMSGGLGQNSGVPTS-SGGGVEPVGANRPN 1366
Query: 1310 PSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLA 1369
+ SGIN S+FVSRSGY+CQQLS L+IQACGLLLAQLPP+FH LY EA+RIIK+ WWLA
Sbjct: 1367 TTASGINASNFVSRSGYSCQQLSVLMIQACGLLLAQLPPEFHTLLYAEAARIIKDCWWLA 1426
Query: 1370 DGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKH 1429
D R + ELDSAVGYALLDPTWA+QDNTSTAIGNIVALLHSFFSNLP EWLE TH +IKH
Sbjct: 1427 DSSRPVKELDSAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPHEWLESTHTVIKH 1486
Query: 1430 LRPITSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASE 1489
LRP+ SVAMLRI FRI+GPLLPRL A LF KTLALL N +GDV+GKN+ PVEASE
Sbjct: 1487 LRPVNSVAMLRIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNSQASPPVEASE 1546
Query: 1490 IADLIDFLHHVVHYEGQGGPVQASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSS 1549
IAD+IDFLHH V YEGQGGPVQ++SKP+ E+L L G+ E LRP+VQHLLSHLK D NSS
Sbjct: 1547 IADIIDFLHHAVMYEGQGGPVQSTSKPKLEILTLCGKVMEILRPDVQHLLSHLKTDPNSS 1606
Query: 1550 IYAATHPKMVQNPS 1563
+YAATHPK+VQNPS
Sbjct: 1607 VYAATHPKLVQNPS 1620
>gi|242062622|ref|XP_002452600.1| hypothetical protein SORBIDRAFT_04g028840 [Sorghum bicolor]
gi|241932431|gb|EES05576.1| hypothetical protein SORBIDRAFT_04g028840 [Sorghum bicolor]
Length = 1613
Score = 2107 bits (5459), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1073/1628 (65%), Positives = 1284/1628 (78%), Gaps = 80/1628 (4%)
Query: 1 MDQNQSQRSSIGAATASSA---SSRAYQFH--PARAAIIDLFNLYLGRSSRQKQDDSIRD 55
MD R + A ++SA R Q H PAR AI DLF LYLG +S+Q+ +D +R+
Sbjct: 1 MDGGHGTRQPMSPAISASAVLPQQRQMQLHHHPARPAIADLFTLYLGMNSKQRAEDPLRE 60
Query: 56 PPNKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVP 115
PNK QKRV ALNR+LPPR+EQF+ D+EQL+ FPD +QL++VTESVLIS V+QC SH P
Sbjct: 61 SPNKLQKRVTALNRDLPPRDEQFISDYEQLRMPFPDAEQLQAVTESVLISFVLQCSSHAP 120
Query: 116 RAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLP 175
++EF+LFA R LC+ G++ WD+ LPSLL++VSS E P V S+ G
Sbjct: 121 QSEFLLFATRCLCARGHLRWDSLLPSLLNTVSSIEA---------PMVQGVSVTGGGPAT 171
Query: 176 TSSGI--PNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQ--- 230
SS I PN+ N+ SNPASPL ++ IGSP QS I+ V A +SP+K+++ S + Q
Sbjct: 172 PSSAITMPNAPNFHPSNPASPLSVMNTIGSPTQSGIDQPVGANVSPIKAAEFSSSAQLGT 231
Query: 231 ----------------------------QFTTR---------------VNSSQ---GIDE 244
+F + VN Q G+DE
Sbjct: 232 AARGDQSRRGAEASYLHHLSCRIILAGLEFNLKPATHAVIFQHMVNWLVNWDQRPHGMDE 291
Query: 245 SDG-KSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTL 303
+D ++ RL+K L EW+H CLDVIW+LV+ED+CR+PFYEL+R LQF+ENIPDDEAL ++
Sbjct: 292 ADAMQTCRLEKPLHEWMHLCLDVIWILVNEDKCRIPFYELVRCNLQFLENIPDDEALVSI 351
Query: 304 ILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLG 363
I+EIHRRRDM+ MHMQMLDQHLHCPTFGTHR LSQ+ P+I+ E+ NLRYSPITYPSVLG
Sbjct: 352 IMEIHRRRDMVCMHMQMLDQHLHCPTFGTHRFLSQSYPSIAGESVTNLRYSPITYPSVLG 411
Query: 364 EPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQ-GPTPG 422
EPLHGEDLA SI +G LDWERA+RC+RHA+R TPSPDWW+RVLLVAPCYR+ +Q TPG
Sbjct: 412 EPLHGEDLANSIPKGGLDWERALRCLRHALRTTPSPDWWRRVLLVAPCYRSQSQQSSTPG 471
Query: 423 AVFTYDMISEAVIDRIVELLKLTNSEVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVS 482
AVF+ DMI EAV DR +ELL+LTNSE CW DWL+F+D+FFFL+KSGCIDF+DFVDKL S
Sbjct: 472 AVFSPDMIGEAVADRTIELLRLTNSETQCWQDWLLFADIFFFLMKSGCIDFLDFVDKLAS 531
Query: 483 RLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCTDPNN- 541
R+ + D ILR+NHVTWLLAQIIR+E+VM L+SD RKVETTRKI+SFH+ED+ D NN
Sbjct: 532 RVTNSDQQILRSNHVTWLLAQIIRIEIVMNTLSSDPRKVETTRKIISFHKEDKSLDANNI 591
Query: 542 -PQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSK--GDRMMDYMN 598
PQSILLDFISS Q LRIWS NTS RE+LN++QLQKGKQIDEWW+Q++K G+RM+D+ N
Sbjct: 592 GPQSILLDFISSSQTLRIWSFNTSIREHLNSDQLQKGKQIDEWWKQMTKASGERMIDFTN 651
Query: 599 MDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMS 658
+D+R+ GMFWV+S+TMAQPACE VMNW +SAG+ +L G N+ P+ER+M+MRE PL MS
Sbjct: 652 LDERATGMFWVLSFTMAQPACEAVMNWFTSAGMADLIQGPNMQPSERIMMMRETYPLSMS 711
Query: 659 LLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNP 718
LL+G S+NLCLKLA Q+E++IF GQ V SIAMVETY RL+L+APHSLFR F+ L QR+P
Sbjct: 712 LLSGLSINLCLKLAFQLEETIFLGQAVPSIAMVETYVRLLLIAPHSLFRPHFTTLTQRSP 771
Query: 719 SLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENL 778
S+L+K GV+ L+LEI+NYRLLPLYRY GK+K LMYD+TKIIS +K KRG+HR+ RLAENL
Sbjct: 772 SILSKSGVSLLLLEILNYRLLPLYRYHGKSKALMYDVTKIISMIKGKRGEHRLFRLAENL 831
Query: 779 CMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQ 838
CMNLILS +DFF +K+E KG TEFTETLNRIT+I+LAI IKTRGIA+ +H++YLQ +LEQ
Sbjct: 832 CMNLILSLKDFFFVKKELKGPTEFTETLNRITIISLAITIKTRGIAEVEHMIYLQPLLEQ 891
Query: 839 IMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADP 898
IMATSQHTWSEKTLRYFP L+RD L+GR+DKRG IQAWQQAETTVINQC QLLSPSA+P
Sbjct: 892 IMATSQHTWSEKTLRYFPPLIRDFLMGRMDKRGQAIQAWQQAETTVINQCNQLLSPSAEP 951
Query: 899 TYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDV 958
YV TYLSHSFPQHRQYLCAGAW+LM GH E INSANL RVLREFSPEEVT+NIYTMVDV
Sbjct: 952 NYVMTYLSHSFPQHRQYLCAGAWMLMNGHLE-INSANLARVLREFSPEEVTANIYTMVDV 1010
Query: 959 LLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVIT 1018
LLHHI E+QR H QDLL KA N+SFF+ THELLPLDILLLALIDRDDDP+ALR+VI+
Sbjct: 1011 LLHHIQFEVQRQHLAQDLLSKAITNLSFFIWTHELLPLDILLLALIDRDDDPYALRLVIS 1070
Query: 1019 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARL 1078
LL++ ELQQRVK +C R PEHWL + KR ELQKALG+HLSWK+RYP FFDDIAARL
Sbjct: 1071 LLEKPELQQRVKNFCNTRS-PEHWLKNQHPKRAELQKALGSHLSWKDRYPPFFDDIAARL 1129
Query: 1079 LPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRI 1138
LPVIPLI+YRLIENDA D ADRVLA YSS LA++PLRF+FVRDILAYFYGHLP KLI RI
Sbjct: 1130 LPVIPLIIYRLIENDATDIADRVLAFYSSLLAFHPLRFTFVRDILAYFYGHLPIKLIGRI 1189
Query: 1139 LNVFDLS-KIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMD 1197
LN+ +S K PFSESF +++ SSN +CPP +YFA LLL LVNNVIP L +SKS S
Sbjct: 1190 LNLLGVSTKTPFSESFAKYLVSSNSSVCPPPEYFANLLLNLVNNVIPPL--SSKSKSNPA 1247
Query: 1198 ASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIV 1257
+ R+ NK +SQ G ++G++ FYQNQDPG+YTQLVLETA IEILSLPV A+QIV
Sbjct: 1248 DTTRSTFNKHHASSQPGGVGNTDGQRAFYQNQDPGSYTQLVLETAAIEILSLPVPAAQIV 1307
Query: 1258 SSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINT 1317
SSLVQI+ ++Q LIQ+++G G S +GQ S LPTSPSG + +S G +++ + SGIN
Sbjct: 1308 SSLVQIIAHVQAMLIQSNSG-QGMSGGLGQSSGLPTSPSGAA-ESSGPNQANSAASGINA 1365
Query: 1318 SSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGE 1377
++FVSRSGY+CQQLS L+IQACGLLLAQLPP+FHMQLY EA+R+IK+ WWLAD R + E
Sbjct: 1366 TNFVSRSGYSCQQLSVLMIQACGLLLAQLPPEFHMQLYSEAARVIKDCWWLADSSRPVKE 1425
Query: 1378 LDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVA 1437
LDSAVGYALLDPTWA+QDNTSTAIGNIVALLHSFFSNLPQEWLE TH +IKHLRP+ SVA
Sbjct: 1426 LDSAVGYALLDPTWASQDNTSTAIGNIVALLHSFFSNLPQEWLESTHTVIKHLRPVNSVA 1485
Query: 1438 MLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKN--TLPPAPVEASEIADLID 1495
MLRI FRI+GPLLPRL A LF KTLALL N +GDV+GKN P PVEASEIAD+ID
Sbjct: 1486 MLRIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNPPVSNPNPVEASEIADIID 1545
Query: 1496 FLHHVVHYEGQGGPVQASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATH 1555
FLHH V YEGQGGPVQ++SKP+ E+L L G+ E LRP+VQHLLSHLK D SSIYAATH
Sbjct: 1546 FLHHAVMYEGQGGPVQSTSKPKLEILTLCGKVIEILRPDVQHLLSHLKIDPASSIYAATH 1605
Query: 1556 PKMVQNPS 1563
PK+VQ+ S
Sbjct: 1606 PKLVQSSS 1613
>gi|357143682|ref|XP_003573012.1| PREDICTED: uncharacterized protein LOC100841446 [Brachypodium
distachyon]
Length = 1618
Score = 2093 bits (5422), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1062/1627 (65%), Positives = 1278/1627 (78%), Gaps = 90/1627 (5%)
Query: 7 QRSSIGAATASSA---SSRAYQFH--PARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQ 61
QR + A ++SA R Q H PAR AI DLF LYLG +S+Q+ +D R+ NK Q
Sbjct: 12 QRQPLSPAISASAVLPHQRQMQLHQHPARPAIADLFTLYLGMNSKQRAEDPARETANKLQ 71
Query: 62 KRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAEFIL 121
KRV AL+R+LPPR+EQF+ DFEQL+ FPDQ+QL++VTESVLIS V+QC SH P++EF+L
Sbjct: 72 KRVSALSRDLPPRDEQFIPDFEQLRMPFPDQEQLQAVTESVLISFVLQCSSHAPKSEFLL 131
Query: 122 FALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAM---PAVSATSLQQSGMLPTSS 178
FA R LC+ G++ WD+ LPSLLS+VSS E QG P S++S + P+
Sbjct: 132 FATRCLCARGHLRWDSLLPSLLSAVSSVEAPMAQGGAVTVGGPVSSSSSAIVAPSAPS-- 189
Query: 179 GIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTR--- 235
+ +SNP SPL +++ IGSP QS I+ + A SP+K ++ S GQ T
Sbjct: 190 -------FHASNPTSPLSAMNTIGSPTQSGIDQPIGANASPIKRTEFSTPGQLGTAARGD 242
Query: 236 -------------------------------------------VNSSQ---GIDESDG-K 248
VN Q G+DE+D +
Sbjct: 243 QSRRGEEISYLHHLSCRIILAGLESSLKPATLAVIFQHMVNWLVNWDQRPHGVDEADTTQ 302
Query: 249 SWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIH 308
+WR+ + + EW+H CLDVIW+LVDE++CRVPFYEL+R+ LQF+ENIPDD+AL ++I+EIH
Sbjct: 303 TWRIGRPVHEWMHLCLDVIWILVDEEKCRVPFYELVRSNLQFLENIPDDDALVSIIMEIH 362
Query: 309 RRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHG 368
RRRDM+ MHMQMLDQHLHCPTFGTHR LSQ+ P+I+ E+ NLRYSPITYPSVLGEPLHG
Sbjct: 363 RRRDMVCMHMQMLDQHLHCPTFGTHRFLSQSYPSIAGESVANLRYSPITYPSVLGEPLHG 422
Query: 369 EDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQ-GPTPGAVFTY 427
EDLA SI +G LDWERA+RC+RHA+R TPSPDWW+RVLLVAPCYR+ +Q TPGAVF+
Sbjct: 423 EDLANSIPKGGLDWERALRCLRHALRTTPSPDWWRRVLLVAPCYRSHSQQSSTPGAVFSP 482
Query: 428 DMISEAVIDRIVELLKLTNSEVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDG 487
DMI EAV DR +ELL+ TNSE CW DWL+F+D+FFFL+KSGCIDF+DFVDKL SR+ +
Sbjct: 483 DMIGEAVADRTIELLRFTNSETQCWQDWLLFADIFFFLMKSGCIDFLDFVDKLASRVTNS 542
Query: 488 DNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCTDPNN--PQSI 545
D ILR+NHVTWLLAQIIR+E+VM L+SD RKVETTRKI+SFH+ED+ DPNN PQSI
Sbjct: 543 DQQILRSNHVTWLLAQIIRIEIVMNTLSSDPRKVETTRKIISFHKEDKSLDPNNVSPQSI 602
Query: 546 LLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSK--GDRMMDYMNMDDRS 603
LLDFISS Q LRIWS NTS RE+LNN+QLQKGKQIDEWW+Q++K G+RM+D+MN+D+R+
Sbjct: 603 LLDFISSSQTLRIWSFNTSIREHLNNDQLQKGKQIDEWWKQMTKASGERMIDFMNLDERA 662
Query: 604 VGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGF 663
+GMFWV+S+TMAQPACE VMNW +SAG T++ G N+ PNER+ +MRE PL MSLL+G
Sbjct: 663 MGMFWVLSFTMAQPACEAVMNWFTSAG-TDVIQGPNMQPNERIAMMRETCPLSMSLLSGL 721
Query: 664 SLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAK 723
S+NLCLKLA Q+EDSIF GQ V SIAMVETY RL+L+ PHSLFR F+ L QR+PS+L+K
Sbjct: 722 SINLCLKLAFQLEDSIFLGQAVPSIAMVETYVRLLLITPHSLFRPHFTTLTQRSPSILSK 781
Query: 724 VGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLI 783
GV+ L+LEI+NYRLLPLYRY GK+K LMYD+TKIIS +K KRG+HR+ RLAENLCMNLI
Sbjct: 782 SGVSLLLLEILNYRLLPLYRYHGKSKALMYDVTKIISMIKGKRGEHRMFRLAENLCMNLI 841
Query: 784 LSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATS 843
LS RDFF +K+E KG TEFTETLNRIT+I+LAI IKTRGIA+ +H++YLQ +LEQIMATS
Sbjct: 842 LSLRDFFLVKKELKGPTEFTETLNRITIISLAITIKTRGIAEVEHMIYLQPLLEQIMATS 901
Query: 844 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 903
QHTWSEKTLRYFP L+RD L+GR+DKRG IQAWQQAETTVINQC QLLSPSA+P YV T
Sbjct: 902 QHTWSEKTLRYFPPLIRDFLMGRMDKRGHAIQAWQQAETTVINQCNQLLSPSAEPNYVMT 961
Query: 904 YLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHI 963
YL+HSF HRQYLCAGAW+LM GH E INSANL RVLREFSPEEVT+NIYTMVDVLLHHI
Sbjct: 962 YLNHSFALHRQYLCAGAWMLMNGHLE-INSANLARVLREFSPEEVTANIYTMVDVLLHHI 1020
Query: 964 HVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLDRQ 1023
+ELQ GH +Q+LL KA N++FF+ THELLPLDILLLALIDRDDDP+ALR+VI LL+R
Sbjct: 1021 QLELQHGHLVQELLSKAIKNLAFFIWTHELLPLDILLLALIDRDDDPYALRLVINLLERT 1080
Query: 1024 ELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPVIP 1083
ELQQR+K +C + EHWL + KR ELQKALGNHLSWK+RYP FFDDIAARLLPVIP
Sbjct: 1081 ELQQRIKAFC-SSCSSEHWLKNQPPKRAELQKALGNHLSWKDRYPPFFDDIAARLLPVIP 1139
Query: 1084 LIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRILNVFD 1143
LI+YRLIENDA D ADRVLA YS+FLA++PLRF+FVRDILAYFYGHLP KLIVR+L+V
Sbjct: 1140 LIIYRLIENDATDIADRVLAFYSNFLAFHPLRFTFVRDILAYFYGHLPSKLIVRVLSVLG 1199
Query: 1144 LS-KIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSK------SGSTM 1196
S K PFSESF Q++ S +CPP +YFA LLL LVNNVIP L+ SK SG+
Sbjct: 1200 ASIKTPFSESFTQYLGPS--TICPPQEYFANLLLSLVNNVIPPLSSKSKSHPADASGNAG 1257
Query: 1197 DASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQI 1256
S PH ++Q+G + ++G++ FYQNQDPG+YTQLVLETA IEILSLPVSASQI
Sbjct: 1258 RTSFSKPH----ASAQAGGISNTDGQRAFYQNQDPGSYTQLVLETAAIEILSLPVSASQI 1313
Query: 1257 VSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGIN 1316
V+SLVQ++ ++Q LIQ+++G G S +GQ S LPTSPSGG ++ G +R+ S SGI
Sbjct: 1314 VTSLVQLIAHVQAMLIQSNSG-QGMSGGLGQNSGLPTSPSGGGAEAAGGNRANTSASGI- 1371
Query: 1317 TSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLG 1376
+++FVSRSGY+CQQLS L+IQACGLLLAQLPP+FHMQLY EA+RIIK+ WLAD R +
Sbjct: 1372 SANFVSRSGYSCQQLSVLMIQACGLLLAQLPPEFHMQLYSEAARIIKDCRWLADSSRPVK 1431
Query: 1377 ELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSV 1436
ELDSAVGYALLDPTWA+QDNTSTAIGN+VALLHSFFSNLPQEWL+ TH +IKHLRP+ SV
Sbjct: 1432 ELDSAVGYALLDPTWASQDNTSTAIGNVVALLHSFFSNLPQEWLDSTHTVIKHLRPVNSV 1491
Query: 1437 AMLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDF 1496
AMLRI FRI+GPLLPRL A LF KTLALL N +GDV+GKN+ VEASEIAD+IDF
Sbjct: 1492 AMLRIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNSQASPHVEASEIADIIDF 1551
Query: 1497 LHHVVHYEGQGGPVQASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHP 1556
LHH V YEGQGGPVQ++SKP+ E+L L G+ E LRP+VQHLLSHLK D+NSSIYAATHP
Sbjct: 1552 LHHAVMYEGQGGPVQSTSKPKLEILTLCGKVMEILRPDVQHLLSHLKTDLNSSIYAATHP 1611
Query: 1557 KMVQNPS 1563
K+VQ+PS
Sbjct: 1612 KLVQHPS 1618
>gi|224099539|ref|XP_002311524.1| predicted protein [Populus trichocarpa]
gi|222851344|gb|EEE88891.1| predicted protein [Populus trichocarpa]
Length = 865
Score = 1483 bits (3839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 729/867 (84%), Positives = 789/867 (91%), Gaps = 6/867 (0%)
Query: 599 MDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMS 658
MDD+S+GMFWVVSYTMAQPA ETV+NWLSSAGV+EL G+N+ NERLMVMREV+PLPMS
Sbjct: 1 MDDKSIGMFWVVSYTMAQPASETVVNWLSSAGVSELLTGTNMQSNERLMVMREVSPLPMS 60
Query: 659 LLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNP 718
LL+G S+NLCLKL QMEDS+F GQVV SIAMVETY RL+L+APHSLFRS FSHLAQR
Sbjct: 61 LLSGLSMNLCLKLVFQMEDSLFAGQVVPSIAMVETYCRLLLIAPHSLFRSHFSHLAQRYQ 120
Query: 719 SLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENL 778
S+L+K GVT LVLEIVNYRLLPLYRYQGK+KTLMYD+TKI+S LK KRGDHRV RLAENL
Sbjct: 121 SILSKPGVTLLVLEIVNYRLLPLYRYQGKSKTLMYDVTKIVSTLKGKRGDHRVFRLAENL 180
Query: 779 CMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQ 838
CMNLILSQRDFFS+KREGKG TEFTETLNR+T++ LAIIIKTRGIADADH+LYLQTMLEQ
Sbjct: 181 CMNLILSQRDFFSVKREGKGPTEFTETLNRVTIVTLAIIIKTRGIADADHMLYLQTMLEQ 240
Query: 839 IMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADP 898
I+ATSQHTWS+KTL YFP LLRDALIGRIDKRGL I+AWQQAETTVINQCTQL+S SADP
Sbjct: 241 ILATSQHTWSKKTLSYFPPLLRDALIGRIDKRGLAIKAWQQAETTVINQCTQLISLSADP 300
Query: 899 TYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDV 958
TYV TY++HSFPQHRQYLCAGAWILMQGHPENINS +L RVLREFSPEEVT+NIYTMVDV
Sbjct: 301 TYVMTYINHSFPQHRQYLCAGAWILMQGHPENINSGHLARVLREFSPEEVTANIYTMVDV 360
Query: 959 LLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVIT 1018
LLH+IHV+LQ GH+LQDLL K CAN++FF+ THELLPLDILLLAL DRDDDPHALRIVI+
Sbjct: 361 LLHNIHVDLQHGHTLQDLLLKTCANLAFFIWTHELLPLDILLLALTDRDDDPHALRIVIS 420
Query: 1019 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARL 1078
LLDRQELQ RVKL+CMNR PEHW+ SG FKR+EL KALGNHLSWK+RYPTFFDDIAARL
Sbjct: 421 LLDRQELQSRVKLFCMNRVRPEHWILSGQFKRLELAKALGNHLSWKDRYPTFFDDIAARL 480
Query: 1079 LPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRI 1138
LPVIPLIVYRL+ENDA+D ADRVLA YS L Y+PLRF+FVRDILAYFYGHLPGKL+VRI
Sbjct: 481 LPVIPLIVYRLLENDAVDPADRVLAMYSPLLEYHPLRFTFVRDILAYFYGHLPGKLVVRI 540
Query: 1139 LNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA 1198
LNV DLSKIPFSESFPQHISS NPV+CPP +YFATLLLGLVNNVIP LN NSK GS DA
Sbjct: 541 LNVLDLSKIPFSESFPQHISSPNPVICPPPEYFATLLLGLVNNVIPPLNTNSKYGSVGDA 600
Query: 1199 ---SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQ 1255
S R PH K+ SQSGP+N SEG+K FYQ QDPGT+TQLVLETAVIE+LSLPV+ASQ
Sbjct: 601 SNNSGRNPHTKTSAASQSGPTNASEGQKAFYQIQDPGTHTQLVLETAVIELLSLPVAASQ 660
Query: 1256 IVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGI 1315
I+ SLVQIVVNIQPTLIQ+SN GA N VGQGSVLPTSPSGGSTDSLG SRSTPSVSGI
Sbjct: 661 IIPSLVQIVVNIQPTLIQSSN---GAPNCVGQGSVLPTSPSGGSTDSLGGSRSTPSVSGI 717
Query: 1316 NTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSL 1375
NTS+FV RSGYTCQQLSCLLIQACGLLLAQLPPDFH+QLYMEASRIIKE WWL D KRSL
Sbjct: 718 NTSNFVLRSGYTCQQLSCLLIQACGLLLAQLPPDFHVQLYMEASRIIKECWWLTDSKRSL 777
Query: 1376 GELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITS 1435
GELDSAVGYALLDPTWAAQDNTSTAIGNI+ALLHSFFSNLPQEWLEGTH IIKHLRPITS
Sbjct: 778 GELDSAVGYALLDPTWAAQDNTSTAIGNIIALLHSFFSNLPQEWLEGTHAIIKHLRPITS 837
Query: 1436 VAMLRIVFRIMGPLLPRLVNAHTLFNK 1462
VAMLRI FRIMGPLLPRL N+HTLFNK
Sbjct: 838 VAMLRIAFRIMGPLLPRLANSHTLFNK 864
>gi|413938731|gb|AFW73282.1| hypothetical protein ZEAMMB73_910774 [Zea mays]
Length = 1074
Score = 1379 bits (3568), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 693/1082 (64%), Positives = 840/1082 (77%), Gaps = 72/1082 (6%)
Query: 1 MDQNQSQRSSIGAATASSA---SSRAYQ--FHPARAAIIDLFNLYLGRSSRQKQDDSIRD 55
MD + R + A ++S R Q HPAR AI DLF LYLG +S+Q+ +D +R+
Sbjct: 1 MDGGHTTRHPMSPAISASTVLPQQRQMQPHHHPARPAIADLFTLYLGMNSKQRAEDPLRE 60
Query: 56 PPNKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVP 115
NK QKRV ALNR+LPPR+EQF+ D+EQL+ QFPD +QL+++TESVLIS V+QC SH P
Sbjct: 61 SSNKLQKRVTALNRDLPPRDEQFISDYEQLRMQFPDAEQLQAITESVLISFVLQCSSHAP 120
Query: 116 RAEFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLP 175
++EF+LFA R LC+ G++ WD+ LPSLL++VSS E P V S+ G +
Sbjct: 121 QSEFLLFATRCLCARGHLRWDSLLPSLLNTVSSIEA---------PMVQGVSVTGGGSVT 171
Query: 176 TSSGI--PNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQ-- 231
SS I PN+ N+ SNPASPL ++ IGSP QS I+ V A +SP+K+++ S + Q
Sbjct: 172 PSSAITMPNAPNFHQSNPASPLSVMNTIGSPTQSGIDQPVGANVSPIKAAEFSSSAQLGT 231
Query: 232 ----------------------------------------FTTRVN-------SSQGIDE 244
F VN QG+DE
Sbjct: 232 AARGDQSRRGAEASYLHHLSCRIILAGLEFNLKPATHAVIFQHMVNWLVNWDQRPQGMDE 291
Query: 245 SDG-KSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTL 303
+D ++ RL+K L EW+H CLDVIW+LV+ED+CR+PFYEL+R LQF+ENIPDDEAL ++
Sbjct: 292 TDTMQTCRLEKPLHEWMHLCLDVIWILVNEDKCRIPFYELVRCNLQFLENIPDDEALVSI 351
Query: 304 ILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLG 363
I+EIHRRRDM+ MHMQMLDQHLHCPTFGTHR LSQ+ P+I+ E+ NLRYSPITYPSVLG
Sbjct: 352 IMEIHRRRDMVCMHMQMLDQHLHCPTFGTHRFLSQSYPSIAGESVTNLRYSPITYPSVLG 411
Query: 364 EPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQ-GPTPG 422
EPLHGEDLA SI +G LDWERA+RC+RHA+R TPSPDWW+RVLLVAPCYR+ +Q TPG
Sbjct: 412 EPLHGEDLANSIPKGGLDWERALRCLRHALRTTPSPDWWRRVLLVAPCYRSQSQQSSTPG 471
Query: 423 AVFTYDMISEAVIDRIVELLKLTNSEVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVS 482
AVF+ DMI EAV DR +ELLKLTNSE CW DWL+F+D+FFFL+KSGCIDF+DFVDKL S
Sbjct: 472 AVFSPDMIGEAVADRTIELLKLTNSETQCWQDWLLFADIFFFLMKSGCIDFLDFVDKLAS 531
Query: 483 RLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCTDPNN- 541
R+ + D ILR+NHVTWLLAQIIR+E+VM L+SD RKV+TTRKI+SFH+ED+ D NN
Sbjct: 532 RVTNSDQQILRSNHVTWLLAQIIRIEIVMNTLSSDPRKVDTTRKIISFHKEDKSLDANNI 591
Query: 542 -PQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQVSK--GDRMMDYMN 598
PQSILLDFISS Q LRIWS NTS RE+LN++QLQKGKQIDEWW+Q+ K G+RM+D+ N
Sbjct: 592 GPQSILLDFISSSQTLRIWSFNTSIREHLNSDQLQKGKQIDEWWKQMMKASGERMIDFTN 651
Query: 599 MDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMS 658
+D+R+ GMFWV+S+TMAQPACE VMNW +SAG+ +L G N+ P+ER+M+MRE PL MS
Sbjct: 652 LDERATGMFWVLSFTMAQPACEAVMNWFTSAGMADLIQGPNMQPSERIMMMRETYPLSMS 711
Query: 659 LLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNP 718
LL+G S+NLCLKLA Q+E++IF GQ V SIAMVETY RL+L+APHSLFR F+ L QR+P
Sbjct: 712 LLSGLSINLCLKLAYQLEETIFLGQAVPSIAMVETYVRLLLIAPHSLFRPHFTALTQRSP 771
Query: 719 SLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENL 778
S+L+K GV+ L+LEI+NYRLLPLYRY GK+K LMYD+TKIIS +K KRG+HR+ RLAENL
Sbjct: 772 SILSKSGVSLLLLEILNYRLLPLYRYHGKSKALMYDVTKIISMIKGKRGEHRLFRLAENL 831
Query: 779 CMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQ 838
CMNLILS +DFF +K+E KG TEFTETLNRIT+I+LAI IKTRGIA+ +H++YLQ +LEQ
Sbjct: 832 CMNLILSLKDFFFVKKELKGPTEFTETLNRITIISLAITIKTRGIAEVEHMIYLQPLLEQ 891
Query: 839 IMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADP 898
IMATSQHTWSEKTLRYFP L+RD L+GR+DKRGL IQAWQQAETTVINQC QLLSPSA+P
Sbjct: 892 IMATSQHTWSEKTLRYFPPLIRDFLMGRVDKRGLAIQAWQQAETTVINQCNQLLSPSAEP 951
Query: 899 TYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDV 958
YV TYLSHSFPQHRQYLCAGAW+LM GH E INSANL RVLREFSPEEVT+NIYT+VDV
Sbjct: 952 NYVMTYLSHSFPQHRQYLCAGAWMLMNGHLE-INSANLARVLREFSPEEVTANIYTVVDV 1010
Query: 959 LLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVIT 1018
LLHHI E+QRGH QDLL KA N+SFF+ THELLPLDILLLALIDRDDDP+ALR+V
Sbjct: 1011 LLHHIQCEVQRGHLAQDLLSKAITNLSFFIWTHELLPLDILLLALIDRDDDPYALRLVTA 1070
Query: 1019 LL 1020
L
Sbjct: 1071 LF 1072
>gi|413938730|gb|AFW73281.1| hypothetical protein ZEAMMB73_910774 [Zea mays]
Length = 1104
Score = 1362 bits (3526), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 693/1112 (62%), Positives = 840/1112 (75%), Gaps = 102/1112 (9%)
Query: 1 MDQNQSQRSSIGAATASSA---SSRAYQ--FHPARAAIIDLFNLYLG------------- 42
MD + R + A ++S R Q HPAR AI DLF LYLG
Sbjct: 1 MDGGHTTRHPMSPAISASTVLPQQRQMQPHHHPARPAIADLFTLYLGVRASLAPKFLISS 60
Query: 43 -----------------RSSRQKQDDSIRDPPNKTQKRVLALNRELPPRNEQFLIDFEQL 85
+S+Q+ +D +R+ NK QKRV ALNR+LPPR+EQF+ D+EQL
Sbjct: 61 RVGVSLLVLTLGVVGLQMNSKQRAEDPLRESSNKLQKRVTALNRDLPPRDEQFISDYEQL 120
Query: 86 QSQFPDQDQLRSVTESVLISMVVQCCSHVPRAEFILFALRSLCSIGYINWDTFLPSLLSS 145
+ QFPD +QL+++TESVLIS V+QC SH P++EF+LFA R LC+ G++ WD+ LPSLL++
Sbjct: 121 RMQFPDAEQLQAITESVLISFVLQCSSHAPQSEFLLFATRCLCARGHLRWDSLLPSLLNT 180
Query: 146 VSSAEMSAGQGSQAMPAVSATSLQQSGMLPTSSGI--PNSSNYQSSNPASPLPSVHGIGS 203
VSS E P V S+ G + SS I PN+ N+ SNPASPL ++ IGS
Sbjct: 181 VSSIEA---------PMVQGVSVTGGGSVTPSSAITMPNAPNFHQSNPASPLSVMNTIGS 231
Query: 204 PAQSAIETSVCAAMSPVKSSDVSCTGQQ-------------------------------- 231
P QS I+ V A +SP+K+++ S + Q
Sbjct: 232 PTQSGIDQPVGANVSPIKAAEFSSSAQLGTAARGDQSRRGAEASYLHHLSCRIILAGLEF 291
Query: 232 ----------FTTRVN-------SSQGIDESDG-KSWRLDKALIEWLHSCLDVIWLLVDE 273
F VN QG+DE+D ++ RL+K L EW+H CLDVIW+LV+E
Sbjct: 292 NLKPATHAVIFQHMVNWLVNWDQRPQGMDETDTMQTCRLEKPLHEWMHLCLDVIWILVNE 351
Query: 274 DRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTH 333
D+CR+PFYEL+R LQF+ENIPDDEAL ++I+EIHRRRDM+ MHMQMLDQHLHCPTFGTH
Sbjct: 352 DKCRIPFYELVRCNLQFLENIPDDEALVSIIMEIHRRRDMVCMHMQMLDQHLHCPTFGTH 411
Query: 334 RILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAI 393
R LSQ+ P+I+ E+ NLRYSPITYPSVLGEPLHGEDLA SI +G LDWERA+RC+RHA+
Sbjct: 412 RFLSQSYPSIAGESVTNLRYSPITYPSVLGEPLHGEDLANSIPKGGLDWERALRCLRHAL 471
Query: 394 RATPSPDWWKRVLLVAPCYRNPAQ-GPTPGAVFTYDMISEAVIDRIVELLKLTNSEVNCW 452
R TPSPDWW+RVLLVAPCYR+ +Q TPGAVF+ DMI EAV DR +ELLKLTNSE CW
Sbjct: 472 RTTPSPDWWRRVLLVAPCYRSQSQQSSTPGAVFSPDMIGEAVADRTIELLKLTNSETQCW 531
Query: 453 HDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMG 512
DWL+F+D+FFFL+KSGCIDF+DFVDKL SR+ + D ILR+NHVTWLLAQIIR+E+VM
Sbjct: 532 QDWLLFADIFFFLMKSGCIDFLDFVDKLASRVTNSDQQILRSNHVTWLLAQIIRIEIVMN 591
Query: 513 ALNSDSRKVETTRKILSFHREDRCTDPNN--PQSILLDFISSCQNLRIWSLNTSTREYLN 570
L+SD RKV+TTRKI+SFH+ED+ D NN PQSILLDFISS Q LRIWS NTS RE+LN
Sbjct: 592 TLSSDPRKVDTTRKIISFHKEDKSLDANNIGPQSILLDFISSSQTLRIWSFNTSIREHLN 651
Query: 571 NEQLQKGKQIDEWWRQVSK--GDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 628
++QLQKGKQIDEWW+Q+ K G+RM+D+ N+D+R+ GMFWV+S+TMAQPACE VMNW +S
Sbjct: 652 SDQLQKGKQIDEWWKQMMKASGERMIDFTNLDERATGMFWVLSFTMAQPACEAVMNWFTS 711
Query: 629 AGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASI 688
AG+ +L G N+ P+ER+M+MRE PL MSLL+G S+NLCLKLA Q+E++IF GQ V SI
Sbjct: 712 AGMADLIQGPNMQPSERIMMMRETYPLSMSLLSGLSINLCLKLAYQLEETIFLGQAVPSI 771
Query: 689 AMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKT 748
AMVETY RL+L+APHSLFR F+ L QR+PS+L+K GV+ L+LEI+NYRLLPLYRY GK+
Sbjct: 772 AMVETYVRLLLIAPHSLFRPHFTALTQRSPSILSKSGVSLLLLEILNYRLLPLYRYHGKS 831
Query: 749 KTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNR 808
K LMYD+TKIIS +K KRG+HR+ RLAENLCMNLILS +DFF +K+E KG TEFTETLNR
Sbjct: 832 KALMYDVTKIISMIKGKRGEHRLFRLAENLCMNLILSLKDFFFVKKELKGPTEFTETLNR 891
Query: 809 ITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRID 868
IT+I+LAI IKTRGIA+ +H++YLQ +LEQIMATSQHTWSEKTLRYFP L+RD L+GR+D
Sbjct: 892 ITIISLAITIKTRGIAEVEHMIYLQPLLEQIMATSQHTWSEKTLRYFPPLIRDFLMGRVD 951
Query: 869 KRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHP 928
KRGL IQAWQQAETTVINQC QLLSPSA+P YV TYLSHSFPQHRQYLCAGAW+LM GH
Sbjct: 952 KRGLAIQAWQQAETTVINQCNQLLSPSAEPNYVMTYLSHSFPQHRQYLCAGAWMLMNGHL 1011
Query: 929 ENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFV 988
E INSANL RVLREFSPEEVT+NIYT+VDVLLHHI E+QRGH QDLL KA N+SFF+
Sbjct: 1012 E-INSANLARVLREFSPEEVTANIYTVVDVLLHHIQCEVQRGHLAQDLLSKAITNLSFFI 1070
Query: 989 LTHELLPLDILLLALIDRDDDPHALRIVITLL 1020
THELLPLDILLLALIDRDDDP+ALR+V L
Sbjct: 1071 WTHELLPLDILLLALIDRDDDPYALRLVTALF 1102
>gi|302756403|ref|XP_002961625.1| hypothetical protein SELMODRAFT_76173 [Selaginella moellendorffii]
gi|300170284|gb|EFJ36885.1| hypothetical protein SELMODRAFT_76173 [Selaginella moellendorffii]
Length = 1482
Score = 1358 bits (3515), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 731/1549 (47%), Positives = 1006/1549 (64%), Gaps = 120/1549 (7%)
Query: 59 KTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAE 118
+T++R A + PP NEQF D+ LQ+QF D +QL+++TES++ + +QC SH P+A+
Sbjct: 1 RTKQRKKASTKPHPP-NEQFQSDYLLLQNQFMDHNQLQAITESLVAMLFIQCGSHAPQAD 59
Query: 119 FILFALRSLCSIGYINWDTFLPSLLSSVSSAEMS--AGQGSQAMPAVSATSLQQSGMLPT 176
F+LFALR+L G + D FL + +V+ E + A +Q+ P VS + + +L T
Sbjct: 60 FLLFALRTLARAGLLRSDMFLLAFFRAVAMVESNPVAVTQAQSSPLVSTSGEPSTNILVT 119
Query: 177 SSGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTRV 236
S +S + PL + + +A+E A + PV S D+ Q+ V
Sbjct: 120 PSSAKRASVW-----LRPL-----VCNVMGAALE----AELRPVASFDMLYLTVQWINDV 165
Query: 237 NSSQGIDESDGKSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELL--RTGLQFIENI 294
S D + WL +CL+V+ +L+DE +CRVPFY LL +T LQ +
Sbjct: 166 ASGSEGSLKD----------VTWLDNCLEVLRMLIDERKCRVPFYALLHDQTLLQ-ADYW 214
Query: 295 PDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYS 354
P++EAL L L++HRRRD +A+HM M D HL CPTF T LR +
Sbjct: 215 PENEALLGLFLDLHRRRDRIALHMLMFDHHLQCPTFST------------------LRST 256
Query: 355 PITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRN 414
+TY +GE L+GE++A S+QR SLD+E+A+RC++H +R PS D W+RVLL AP +R
Sbjct: 257 ALTYAGAMGEALYGEEVAASVQRDSLDYEKALRCLKHGLRTNPSADIWRRVLLCAPRHRQ 316
Query: 415 PAQ------GPT-----PGAVFTYDMISEAVIDRIVELLK-------------------L 444
Q GP PG VF +M EAV++RI++L++
Sbjct: 317 QQQPVPPRPGPNTSWTQPGLVFNSEMTCEAVVERIMDLMQPISTGRGFYHIFSFPAFSAT 376
Query: 445 TNSEVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQI 504
+ +E W +WL F+D+F++ ++ G +DF++F++KL G+ I R+NHVTWLLAQ+
Sbjct: 377 STTESGRWQEWLNFADLFYYFMRRGYLDFLEFIEKLAGAFASGEQSIQRSNHVTWLLAQV 436
Query: 505 IRVELVMGAL--NSDSRKVETTRKILSFHREDRCTDPNN---PQSILLDFISSCQNLRIW 559
R+E V AL + DSRKVET +KILSFH DR D +N PQ+ LLD++ S Q LR+W
Sbjct: 437 FRLETVTQALSEDEDSRKVETAQKILSFHMADRSVDHSNAVSPQAKLLDYVGSSQILRLW 496
Query: 560 SLNTSTREYLNN----EQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMA 615
+LN + E+L E +QKGK IDEWW++V KG+R +DY N+DD S+GM WV+S+TM
Sbjct: 497 ALNRTVMEHLVGNRMPEHIQKGKTIDEWWKKVLKGERFLDYANLDDNSMGMVWVLSHTMT 556
Query: 616 QPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQM 675
QP + VMNW+ S GV E+ G NER+ V+ E +PLP+++L+G SL+LC++L Q+
Sbjct: 557 QPVADAVMNWMRSNGVGEVLVG-----NERIAVVHETSPLPIAMLSGLSLHLCMRLIQQI 611
Query: 676 EDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVN 735
E+ IF GQ+V SIAM+ETY RL+L+AP +LF+ + + Q+ S AK G++ ++LE++N
Sbjct: 612 EEQIFAGQMVPSIAMLETYVRLLLVAPQTLFQHHLNGMMQKYQSGAAKAGISLILLELLN 671
Query: 736 YRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKRE 795
YRL+PLYR+ GK K L++D+ KII +K KRGDHR+ RLAENL +NL+LS ++ +K+E
Sbjct: 672 YRLMPLYRFHGKLKQLVFDMAKIIIPMKAKRGDHRLFRLAENLGINLVLSMKEVLLIKKE 731
Query: 796 GKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYF 855
+TEFTETLNRI V++LAI IKTRGIA+ + +L LQT LEQI+A S+HTWSEKT+R+F
Sbjct: 732 KGATTEFTETLNRIMVVSLAITIKTRGIAEFEQLLVLQTALEQILANSKHTWSEKTMRHF 791
Query: 856 PSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQY 915
P LR+ L R D R LT+Q WQQ ETTV++QC QLL + DP + ++++HSFP HR +
Sbjct: 792 PQTLREVLALRSDGRLLTLQTWQQVETTVLHQCQQLL--AGDPAFAMSFVNHSFPPHRPF 849
Query: 916 LCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQD 975
LCA AW+LM PEN N NL + L+E SPE+VTSNIYT+VD+LLHH+H++LQ GHS QD
Sbjct: 850 LCAAAWVLMDCRPENFNCGNLGKALKELSPEDVTSNIYTLVDILLHHMHLQLQHGHSQQD 909
Query: 976 LLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLDRQELQQ-RVKLYCM 1034
LL +A A +++ V + E+LP DILLLAL+DRDDD HALR+V LLDR+E QQ RV+ YC
Sbjct: 910 LLLRASATLTYLVWSQEILPFDILLLALLDRDDDIHALRLVSLLLDRKEFQQLRVQNYCR 969
Query: 1035 NRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDA 1094
G EHWL+ G F+RVE +ALGNHL+ KERYP FFDD+A R LPVI L+VYRLIENDA
Sbjct: 970 QHGQQEHWLHPGPFQRVEPPQALGNHLAGKERYPVFFDDMALRALPVIHLVVYRLIENDA 1029
Query: 1095 MDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFP 1154
D+A+ VL YS L Y+P RF+FVRD LAYFYGHLP KLI+R+L+ D++K+P SE+F
Sbjct: 1030 TDTAEHVLTAYSPLLRYHPTRFTFVRDTLAYFYGHLPNKLILRLLSSLDIAKMPVSEAFI 1089
Query: 1155 QHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSG 1214
+ +++ PP DY+ T+LL LVNNVIP+ ++ S S + +P S +
Sbjct: 1090 RILNTGT----PPYDYYVTMLLNLVNNVIPSFTNKPRTSSPTMESFSTTRSTTPGKSPAS 1145
Query: 1215 PSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQT 1274
+N ++ K FY +QDPG+Y QLVLET VIE+LSLP +Q V+ LVQI V + PT +
Sbjct: 1146 STNSTDNHKAFYHHQDPGSYCQLVLETCVIELLSLPTPPAQAVAMLVQIAVRV-PT-PPS 1203
Query: 1275 SNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCL 1334
+ ++ + +LPTSP T ST +G S F+S
Sbjct: 1204 QAYASASQSAAPRSPLLPTSPPSACTAESSTPSSTSVSTGQTISPFISPQ---------- 1253
Query: 1335 LIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQ 1394
+IQACGLLLAQLP FH Y E +RI+K+ WWL D K+S E+D+A GY++ DP+WA Q
Sbjct: 1254 VIQACGLLLAQLPRQFHDVFYKEVARILKDCWWLKDPKKSPKEMDAAFGYSVWDPSWAVQ 1313
Query: 1395 DNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLV 1454
D TS+ IGN AL H+F +N+ EWLE TH ++ RP+T+VA LR+ FR++GPL+PR V
Sbjct: 1314 DGTSSVIGNAAALFHAFTANISFEWLENTHDVVNLQRPMTTVAQLRLAFRMLGPLVPRFV 1373
Query: 1455 NAHTLFNKTLALLLNTMGDVYGKNTLPPAPV-EASEIADLIDFLHHVVHYEGQGGPVQAS 1513
+ LF KTLALL + +V+G+N A V + +EI DL+DF+HHVV E Q QA
Sbjct: 1374 ISRPLFAKTLALLFTMLAEVFGRN----AQVHDVTEITDLVDFMHHVVMLEAQ----QAG 1425
Query: 1514 SKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNP 1562
KPRP+ L L +A E L P+VQHL HL D SIYAATHPK+ Q P
Sbjct: 1426 GKPRPDTLGLCNKAVERLHPDVQHLFQHLTVDPQRSIYAATHPKIAQRP 1474
>gi|302762549|ref|XP_002964696.1| hypothetical protein SELMODRAFT_82733 [Selaginella moellendorffii]
gi|300166929|gb|EFJ33534.1| hypothetical protein SELMODRAFT_82733 [Selaginella moellendorffii]
Length = 1482
Score = 1352 bits (3498), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 728/1549 (46%), Positives = 1004/1549 (64%), Gaps = 120/1549 (7%)
Query: 59 KTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAE 118
+T++R A + PP NEQF D+ LQ+QF D +QL+++TES++ + +QC SH P+A+
Sbjct: 1 RTKQRKKASTKPHPP-NEQFQSDYLLLQNQFMDHNQLQAITESLVAMLFIQCGSHAPQAD 59
Query: 119 FILFALRSLCSIGYINWDTFLPSLLSSVSSAEMS--AGQGSQAMPAVSATSLQQSGMLPT 176
F+LFALR+L G + D FL + +V+ E + A +Q+ P VS + + +L T
Sbjct: 60 FLLFALRTLARAGLLRSDMFLLAFFRAVAMVESNPVAVTQAQSSPLVSTSGEPSTNILVT 119
Query: 177 SSGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTRV 236
S +S + PL + + +A+E A + PV S D+ Q+ V
Sbjct: 120 PSSAKRASVW-----LRPL-----VCNVMGAALE----AELRPVASFDMLYLTVQWINDV 165
Query: 237 NSSQGIDESDGKSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELL--RTGLQFIENI 294
S D + WL +CL+V+ +L+DE +CRVPFY LL +T LQ +
Sbjct: 166 ASGSEGSLKD----------VTWLDNCLEVLRMLIDERKCRVPFYALLHDQTLLQ-ADYW 214
Query: 295 PDDEALFTLILEIHRRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYS 354
P++EAL L L++HRRRD +A+HM M D HL CPTF T LR +
Sbjct: 215 PENEALLGLFLDLHRRRDRIALHMLMFDHHLQCPTFST------------------LRST 256
Query: 355 PITYPSVLGEPLHGEDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRN 414
+TY +GE L+GE++A S+QR SLD+E+A+RC++H +R PS D W+RVL+ AP +R
Sbjct: 257 ALTYAGAMGEALYGEEVAASVQRDSLDYEKALRCLKHGLRTNPSADIWRRVLVCAPRHRQ 316
Query: 415 PAQ------GPT-----PGAVFTYDMISEAVIDRIVELLK-------------------L 444
Q GP PG VF +M EAV++RI++L++
Sbjct: 317 QQQPVPPRPGPNTSWTQPGLVFNSEMTCEAVVERIMDLMQPISTGRGFYHIFSFPAFSAT 376
Query: 445 TNSEVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQI 504
+ +E W +WL F+D+F++ ++ G +DF++F++KL G+ I R+NHVTWLLAQ+
Sbjct: 377 STTESGRWQEWLNFADLFYYFMRRGYLDFLEFIEKLAGAFASGEQSIQRSNHVTWLLAQV 436
Query: 505 IRVELVMGAL--NSDSRKVETTRKILSFHREDRCTDPNN---PQSILLDFISSCQNLRIW 559
R+E V AL + DSRKVET +KILSFH DR D +N PQ+ LLD++ S Q LR+W
Sbjct: 437 FRLETVTQALSEDEDSRKVETAQKILSFHMADRSVDHSNAVSPQAKLLDYVGSSQILRLW 496
Query: 560 SLNTSTREYLNN----EQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMA 615
+LN + E L E +QKGK IDEWW++V KG+R +DY N+DD S+GM WV+S+TM
Sbjct: 497 ALNRTVMEQLVGNRMPEHIQKGKTIDEWWKKVLKGERFLDYANLDDNSMGMVWVLSHTMT 556
Query: 616 QPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQM 675
QP + VMNW+ S GV E+ G NER+ V+ E +PLP+++L+G SL+LC++L Q+
Sbjct: 557 QPVADAVMNWMRSNGVGEVLVG-----NERIAVVHETSPLPIAMLSGLSLHLCMRLIQQI 611
Query: 676 EDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVN 735
E+ IF GQ+V SIAM+ETY RL+L+AP +LF+ + + Q+ S AK G++ ++LE++N
Sbjct: 612 EEQIFAGQMVPSIAMLETYVRLLLVAPQTLFQHHLNGMMQKYQSGAAKAGISLILLELLN 671
Query: 736 YRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKRE 795
YRL+PLYR+ GK K L++D+ KII +K KRGDHR+ RLAENL +NL+LS ++ +K+E
Sbjct: 672 YRLMPLYRFHGKLKQLVFDMAKIIIPMKAKRGDHRLFRLAENLGINLVLSMKEVLLIKKE 731
Query: 796 GKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYF 855
+TEFTETLNRI V++LAI IKTRGIA+ + +L LQT LEQI+A S+HTWSEKT+R+F
Sbjct: 732 KGATTEFTETLNRIMVVSLAITIKTRGIAEFEQLLVLQTALEQILANSKHTWSEKTMRHF 791
Query: 856 PSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQY 915
P LR+ L R D R LT+Q WQQ ETTV++QC QLL + DP + ++++HSFP HR +
Sbjct: 792 PQTLREVLALRSDGRLLTLQTWQQVETTVLHQCQQLL--AGDPAFAMSFVNHSFPPHRPF 849
Query: 916 LCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQD 975
LCA AW+LM PEN N NL + L+E SPE+VTSNIY +VD+LLHH+H++LQ GHS QD
Sbjct: 850 LCAAAWVLMDCRPENFNCGNLGKALKELSPEDVTSNIYMLVDILLHHMHLQLQHGHSQQD 909
Query: 976 LLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLDRQELQQ-RVKLYCM 1034
LL +A A +++ V + E+LP DILLLAL+DRDDD HALR+V LLDR+E QQ RV+ YC
Sbjct: 910 LLLRASATLTYLVWSQEILPFDILLLALLDRDDDIHALRLVSLLLDRKEFQQLRVQNYCR 969
Query: 1035 NRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDA 1094
G EHWL+ G F+RVE +ALGNHL+ KERYP FFDD+A R LPVI L+VYRLIENDA
Sbjct: 970 QHGQQEHWLHPGPFQRVEPPQALGNHLAGKERYPVFFDDMALRALPVIHLVVYRLIENDA 1029
Query: 1095 MDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFP 1154
D+A+ VL YS L Y+P RF+FVRD LAYFYGHLP KLI+R+L+ D++K+P SE+F
Sbjct: 1030 TDTAEHVLTAYSPLLRYHPTRFTFVRDTLAYFYGHLPNKLILRLLSSLDIAKMPVSEAFI 1089
Query: 1155 QHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSG 1214
+ +++ PP DY+ T+LL LVNNVIP+ ++ S S + +P S +
Sbjct: 1090 RILNTGT----PPYDYYVTMLLNLVNNVIPSFTNKPRTSSPTMESFCTTRSTTPGKSPAS 1145
Query: 1215 PSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQT 1274
+N ++ K FY +QDPG+Y QLVLET VIE+LSLP +Q V+ LVQI V + PT +
Sbjct: 1146 STNSADNHKAFYHHQDPGSYCQLVLETCVIELLSLPTPPAQAVAMLVQIAVRV-PT-PPS 1203
Query: 1275 SNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCL 1334
+ ++ + +LPTSP T ST +G S F+S
Sbjct: 1204 QAYASASQSAAPRSPLLPTSPPSACTAESSTPSSTSVSTGQTISPFISPQ---------- 1253
Query: 1335 LIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQ 1394
+IQACGLLLAQLP FH Y E +RI+K+ WWL D K++ E+D+A GY++ DP+WA Q
Sbjct: 1254 VIQACGLLLAQLPRQFHDVFYKEVARILKDCWWLKDPKKTPKEMDAAFGYSVWDPSWAVQ 1313
Query: 1395 DNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLV 1454
D TS+ IGN AL H+F +N+ EWLE TH ++ RP+T+VA LR+ FR++GPL+PR V
Sbjct: 1314 DGTSSVIGNAAALFHAFTANISFEWLENTHDVVNLQRPMTTVAQLRLAFRMLGPLVPRFV 1373
Query: 1455 NAHTLFNKTLALLLNTMGDVYGKNTLPPAPV-EASEIADLIDFLHHVVHYEGQGGPVQAS 1513
+ LF KTLALL + +V+G+N A V + +EI DL+DF+HHVV E Q QA
Sbjct: 1374 ISRPLFAKTLALLFTMLAEVFGRN----AQVHDVTEITDLVDFMHHVVMLEAQ----QAG 1425
Query: 1514 SKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNP 1562
KPRP+ L L +A E L P+VQHL HL D SIYAATHPK+ Q P
Sbjct: 1426 GKPRPDTLGLCNKAVERLHPDVQHLFQHLTVDPQRSIYAATHPKIAQRP 1474
>gi|168019772|ref|XP_001762418.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686496|gb|EDQ72885.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1503
Score = 1339 bits (3466), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 747/1578 (47%), Positives = 989/1578 (62%), Gaps = 159/1578 (10%)
Query: 61 QKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAEFI 120
+KRV A++R P+ +QF DF LQSQF D F+
Sbjct: 1 RKRVAAVSRPQAPKEDQFSSDFLMLQSQFTVSD-------------------------FL 35
Query: 121 LFALRSLCSIGYINWDTFLPSLLSSVSSAE-MSAGQGSQAMPAVSATSLQQSGMLP---- 175
L L+ L +G++ WD+FL LL + AE + GS V T Q +G L
Sbjct: 36 LSCLQILVKMGFVRWDSFLHILLRAAEKAENIGQATGSHQGMNVGVTGPQLTGPLAMMMQ 95
Query: 176 --------------------TSSGIPNSS--------NYQSSNPASPLPSVHGIGSPAQS 207
TSS N + Y S NP+S G G+ S
Sbjct: 96 GTTATPASTPASPSPSSNLLTSSAHGNVAASPAHSGVEYSSVNPSSN----GGTGASGTS 151
Query: 208 AIETS---VCAAM--------SPVKSSD----VSCTGQQFTTRVNSSQGIDESDGKSWRL 252
I + VC M PV D V+ Q + V+ + +S SW+L
Sbjct: 152 IINSLRPLVCRVMLAALDNELKPVTCLDILLHVAQWIQTWDAEVDGKEDESKSRLNSWKL 211
Query: 253 DKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQF-IENIPDDEALFTLILEIHRRR 311
+ W+HSC++VIW L+DE++CRVPFY LL Q +E PDDEALF L LE+HRRR
Sbjct: 212 KSKM--WIHSCVEVIWALIDENKCRVPFYALLHDKTQLQVERWPDDEALFALFLEVHRRR 269
Query: 312 DMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDL 371
D +A+HM LDQHLHCPTF T LR S +TYP +GE LHGED+
Sbjct: 270 DKIALHMLPLDQHLHCPTFAT------------------LRVSSLTYPGTMGELLHGEDV 311
Query: 372 ATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQ--GPTPGAVF---- 425
AT+I +GS++WE+AMRC+R A+RA S DWWK+VL++AP ++ Q GP G++F
Sbjct: 312 ATAIPKGSVEWEKAMRCLRQALRACVSTDWWKKVLVLAPRFKKAPQSMGPRTGSLFVGQP 371
Query: 426 ----TYDMISEAVIDRIVELLKL--TNSEVNC-WHDWLIFSDVFFFLVKSGCIDFVDFVD 478
+ DM +AV++RI+EL++ T C W +WL+F+D+F+F + + C+DF++ +D
Sbjct: 372 SLEFSADMTCDAVVERIMELMQPLPTGYAFTCRWQEWLMFADLFYFFMSTSCLDFLELID 431
Query: 479 KLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRC-- 536
KL R +G ++ +NHVTWLLAQ+ R+E+V AL+S+ +VET RKILSF+ +R
Sbjct: 432 KLSLRFANGT--VMASNHVTWLLAQVFRLEIVTSALSSEILQVETARKILSFNMAERSVE 489
Query: 537 -TDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN----EQLQKGKQIDEWWRQVSKGD 591
T Q++LLDF+ S Q LR+WS+N + E L+ E +QKGK IDEWW+QV KG+
Sbjct: 490 QTSNTTAQALLLDFVGSSQTLRLWSINRNMMENLHGNRVQEHMQKGKVIDEWWKQVMKGE 549
Query: 592 RMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMRE 651
++DY +D++++GM WV+S TM QP E +M W S+G++E+ + ERL V+ E
Sbjct: 550 WVLDYAQLDEKAMGMVWVLSNTMTQPISEALMIWFRSSGLSEI-----ILQGERLSVIHE 604
Query: 652 VNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFS 711
PLPM+LL+G SL+LCL+L Q+E+ IF GQ + SIAMVETY RL+L AP +LFR +
Sbjct: 605 TRPLPMTLLSGLSLHLCLRLLTQIEELIFAGQFIPSIAMVETYVRLLLAAPQNLFRHHLN 664
Query: 712 HLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRV 771
+A R S + K V+ L+LE+ NYRLLPLYR+ K K L++DI KII +KVKRG+HR+
Sbjct: 665 GMAHRFQSGMTKPAVSLLLLELFNYRLLPLYRFHNKLKQLIFDIAKIIITVKVKRGEHRL 724
Query: 772 LRLAENLCMNLILSQRDFFSLKREGKG-STEFTETLNRITVIALAIIIKTRGIADADHVL 830
RLAENL +NLIL+ +D +K+E KG +TEFTETLNRI V+ LA +KTRGIAD + ++
Sbjct: 725 FRLAENLGINLILNMKDVLLVKKELKGATTEFTETLNRIMVLNLAFTMKTRGIADFEQMI 784
Query: 831 YLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQ 890
L+ LEQI+A+ HTWSEKT+R+FP LLR+AL RID R IQ+WQQAE TV++ C Q
Sbjct: 785 ILKPALEQILASINHTWSEKTMRHFPPLLREALANRIDTRAHVIQSWQQAEHTVMSHCRQ 844
Query: 891 LLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVT 949
LLS ++DP+YV Y+ HS P HRQ+LCAGAW+ M P++I+ ANL R L+EFSPEEVT
Sbjct: 845 LLSANSDPSYVSQYIQHSLPAHRQFLCAGAWMSMDFERPDSISIANLGRTLKEFSPEEVT 904
Query: 950 SNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDD 1009
+N+Y MVDVLLHHIHV+LQ GHSLQ+LL A ++ F+ ELLP DI+LLAL DRDDD
Sbjct: 905 TNVYMMVDVLLHHIHVQLQHGHSLQNLLLATSAGLAHFMWNQELLPFDIVLLALTDRDDD 964
Query: 1010 PHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPT 1069
HALR+V LLDR E QQRV+ Y ++RG EHW+ G F+R E +ALG+HL+ K+R+P
Sbjct: 965 AHALRLVGLLLDRPEFQQRVQTYYVHRGQTEHWMQLGPFQRPEYPQALGSHLAGKDRFPL 1024
Query: 1070 FFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH 1129
FFDD+ R LPVIPLIVYRLIENDA ++A+R+L Y+ + Y+P RFSFVRD LAYFYGH
Sbjct: 1025 FFDDMCLRALPVIPLIVYRLIENDATETAERLLHVYTPLIFYHPTRFSFVRDTLAYFYGH 1084
Query: 1130 LPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYN 1189
LP KL+ R+L DL KIPFSE+F Q I + N P +YF LL+GLVNNVIP L+
Sbjct: 1085 LPTKLVRRLLGSLDLPKIPFSETFLQQIKAFNTGSSPSYEYFHNLLVGLVNNVIPPLHGK 1144
Query: 1190 SKSGSTMDASL---RAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEI 1246
+ +T L R N++ + S +N +E K FY +QDPG+Y QL+LETAV+E+
Sbjct: 1145 PGTSATGGDGLLSSRFVLNRN-QAAASTANNTTEVNKAFYLHQDPGSYNQLLLETAVVEL 1203
Query: 1247 LSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGAS 1306
LSLP +QIV+ L+ I V + + Q GP P SPS G G +
Sbjct: 1204 LSLPPPPNQIVAMLIHIAVKLPTSFPQ--GGPPKT----------PQSPSSG-----GEA 1246
Query: 1307 RSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRII-KES 1365
S S SG+N SS +T S L+IQACGLLLAQLP FH +Y E +RII K+
Sbjct: 1247 LSGQSSSGLNNSS----PQFTH---SPLMIQACGLLLAQLPVAFHGAIYSETARIIKKDC 1299
Query: 1366 WWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHV 1425
WWL D + +LD+ GY+ DP+W A+D+T+T I N V LLH+ SNLP EWLEG H
Sbjct: 1300 WWLTDPSKQSRDLDAIFGYSTWDPSWGARDDTATVIANTVTLLHTLQSNLPFEWLEGMHS 1359
Query: 1426 IIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPV 1485
+I RP SV LR+ +RIMG L + + LF KTLALL + DV+G+N+ P+
Sbjct: 1360 VITQQRPFVSVVHLRLAYRIMG-PLLPRLLSRPLFAKTLALLFTILADVFGRNSQVPSAT 1418
Query: 1486 EASEIADLIDFLHHVVHYEGQGGPVQASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPD 1545
EA++I DL+DFLHH V E Q QA +PRPE LVL +A E LRP+VQ L HL PD
Sbjct: 1419 EATDIVDLVDFLHHAVMMEVQATG-QAGGRPRPETLVLCSKAVERLRPDVQLLFRHLSPD 1477
Query: 1546 VNSSIYAATHPKMVQNPS 1563
SSIYAATHPK+ Q P
Sbjct: 1478 GASSIYAATHPKL-QRPG 1494
>gi|449465812|ref|XP_004150621.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Cucumis sativus]
gi|449524110|ref|XP_004169066.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Cucumis sativus]
Length = 554
Score = 880 bits (2275), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/550 (78%), Positives = 481/550 (87%), Gaps = 4/550 (0%)
Query: 1017 ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAA 1076
I+LLDRQELQQRVKLYC++RG PEHWL+S +FKR ELQKALGNHLSWK+RYP FFDDIAA
Sbjct: 6 ISLLDRQELQQRVKLYCISRGSPEHWLHSVVFKRNELQKALGNHLSWKDRYPVFFDDIAA 65
Query: 1077 RLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIV 1136
RLLP+IPLIVYRLIENDA+D ADR+LA YS FLAY+PLRF+FVRDILAYFY HLP KLIV
Sbjct: 66 RLLPIIPLIVYRLIENDAVDQADRLLALYSPFLAYHPLRFTFVRDILAYFYSHLPNKLIV 125
Query: 1137 RILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTM 1196
RIL V D+SKIPFSESFP HISS PVMCPP+DYFATLLLGLVNNVIP+L SKSG+
Sbjct: 126 RILYVLDISKIPFSESFPTHISSPGPVMCPPMDYFATLLLGLVNNVIPSLQ-TSKSGTVG 184
Query: 1197 D---ASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSA 1253
D +S+R HNKSP T+ ++ E +K FYQ QDPGTYTQLVLETAVIE+LSLPVSA
Sbjct: 185 DNSSSSMRPSHNKSPATNPPVATSAPESQKAFYQIQDPGTYTQLVLETAVIELLSLPVSA 244
Query: 1254 SQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRSTPSVS 1313
QIVSSLVQIVVNIQPTLIQ+SN + A +S+GQGS +PTSPSGGSTDSL A RS SVS
Sbjct: 245 GQIVSSLVQIVVNIQPTLIQSSNNLHVAPSSMGQGSAIPTSPSGGSTDSLNAGRSNTSVS 304
Query: 1314 GINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKR 1373
GINT +FVSRSGYTCQQLS L+IQACGLLLAQLP +FH QLY+EASRIIKE+WWL+D R
Sbjct: 305 GINTPNFVSRSGYTCQQLSSLMIQACGLLLAQLPQEFHGQLYLEASRIIKETWWLSDATR 364
Query: 1374 SLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPI 1433
SLGEL+SAVGY+L+DPTWAAQDNTSTAIGN VALLHS FSNLPQEWLEG HVIIKHLRP+
Sbjct: 365 SLGELNSAVGYSLMDPTWAAQDNTSTAIGNTVALLHSLFSNLPQEWLEGAHVIIKHLRPV 424
Query: 1434 TSVAMLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIADL 1493
TSVAMLRIVFRI+GPLLP+L NAH+LF KTL+ LL+ M DV+GKN+ PVEA+EIADL
Sbjct: 425 TSVAMLRIVFRIIGPLLPKLANAHSLFCKTLSSLLSVMVDVFGKNSQTSIPVEAAEIADL 484
Query: 1494 IDFLHHVVHYEGQGGPVQASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAA 1553
IDFLHHVVHYEGQGGPV ASSKPR EVL + GRA E+LRP+VQHLLSHLKPD +SIYAA
Sbjct: 485 IDFLHHVVHYEGQGGPVVASSKPRQEVLAIIGRALENLRPDVQHLLSHLKPDTTTSIYAA 544
Query: 1554 THPKMVQNPS 1563
THPK+VQNP+
Sbjct: 545 THPKLVQNPA 554
>gi|2829895|gb|AAC00603.1| hypothetical protein [Arabidopsis thaliana]
Length = 1075
Score = 751 bits (1939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/616 (62%), Positives = 445/616 (72%), Gaps = 79/616 (12%)
Query: 130 IGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTSSGIPNSSNYQSS 189
I YINWDTFLPSLLSSVS+AE S QG QA A + +S S S S
Sbjct: 52 ISYINWDTFLPSLLSSVSAAEASLSQGVQAAAATAGSSATSS----------QSVVPVSV 101
Query: 190 NPASPLPSVHGIGSPAQSAIET-----SVCAAMSPVKSSDVSCTGQQFTTRVNSSQ---- 240
NP S LPS HGIGSP+ S +++ + A V+ + + + + VNS +
Sbjct: 102 NPTSLLPSAHGIGSPSASEVKSVENGQQIARAGQIVRENAMRNSQRIRAAAVNSLRQLSC 161
Query: 241 -----------------------------------GIDESDGKSWRLDKALIEWLHSCLD 265
G ++S GKSWR +K L EWL SCLD
Sbjct: 162 KIILIGVESSLKPVTHAEIFQYMMNWLVNWDRRDLGTEDSVGKSWRSEKTLAEWLRSCLD 221
Query: 266 VIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDMMAMHMQMLDQHL 325
VIWLLV+E R+PFYELLR+GLQFIENIPDDEALFTLI+EIHRRRD MAMHM MLDQHL
Sbjct: 222 VIWLLVEEGESRIPFYELLRSGLQFIENIPDDEALFTLIMEIHRRRDAMAMHMLMLDQHL 281
Query: 326 HCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLATSIQRGSLDWERA 385
HCP+FGTHRI+SQ T N+ EA +LR+SPITYPSVLGEPL+GEDLA SI +GSLDWERA
Sbjct: 282 HCPSFGTHRIVSQITANVPPEAVPHLRHSPITYPSVLGEPLYGEDLAMSIPKGSLDWERA 341
Query: 386 MRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQ-GPTPGAVFTYDMISEAVIDRIVELLKL 444
+RCIRHAIR TPSPDWWKRVL+VAPCYR Q GP PGAVFT DMI
Sbjct: 342 VRCIRHAIRTTPSPDWWKRVLVVAPCYRPSTQAGPIPGAVFTSDMIY------------- 388
Query: 445 TNSEVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQI 504
NCW +WL+FSD+FFFL+KSGC DFVDF+DKLV RL DNHILRTNHVTWLLAQI
Sbjct: 389 ----ANCWQEWLVFSDIFFFLIKSGCTDFVDFIDKLVLRLNGVDNHILRTNHVTWLLAQI 444
Query: 505 IRVELVMGALNSDSRKVETTRKILSFHREDRCTDPNNPQSILLDFISSCQNLRIWSLNTS 564
IRVELVM ALNSD++KVETTRKILSFHREDR +DPNNPQS+LLDF+SSCQNLRIWSL+T+
Sbjct: 445 IRVELVMTALNSDAKKVETTRKILSFHREDRNSDPNNPQSVLLDFVSSCQNLRIWSLSTT 504
Query: 565 TREYLNNEQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMN 624
TR YLNNEQL KGKQIDEWWR SKG+RMMDYMNMDDRS+GMFWVVSYTMAQPACETV+N
Sbjct: 505 TRAYLNNEQLLKGKQIDEWWR--SKGERMMDYMNMDDRSIGMFWVVSYTMAQPACETVIN 562
Query: 625 WLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQV 684
WLSSAG+ EL PG L PN+R+M+ +EV PLPMSLL+GFS+NLCLKLALQME+++F Q
Sbjct: 563 WLSSAGMAEL-PG--LQPNDRVMMTQEVTPLPMSLLSGFSMNLCLKLALQMEEALFVSQ- 618
Query: 685 VASIAMVETYTRLMLL 700
ET R+ ++
Sbjct: 619 -GPTEFTETLNRITIM 633
Score = 461 bits (1186), Expect = e-126, Method: Compositional matrix adjust.
Identities = 227/319 (71%), Positives = 266/319 (83%), Gaps = 7/319 (2%)
Query: 1016 VITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIA 1075
+++LL +L R+K YC NRG PEHWL + +FKR ELQKALGNHLSWK+RYPTFFDDIA
Sbjct: 757 LMSLLKTPDLLLRIKNYCQNRGSPEHWLVTQVFKRNELQKALGNHLSWKDRYPTFFDDIA 816
Query: 1076 ARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLI 1135
ARLLPVIPL++YRLIEN+AM+ AD +L +S FLAY+PLRF+FVRDILAYFYGHLPGKL+
Sbjct: 817 ARLLPVIPLVLYRLIENNAMEQADNLLLAHSHFLAYHPLRFTFVRDILAYFYGHLPGKLV 876
Query: 1136 VRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKS--- 1192
+R+L V DLSKIPFSESFPQ+IS + +CPPLDYFA+LLL LVNNVIP L+ +S
Sbjct: 877 LRMLKVLDLSKIPFSESFPQYISPTGAPVCPPLDYFASLLLNLVNNVIPPLSSSSNCSSR 936
Query: 1193 ----GSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILS 1248
+++S R PH K+P TSQ GP+N SEG+K FYQ QDPGTYTQLVLETAVIEILS
Sbjct: 937 SGSMADILNSSARPPHGKTPGTSQPGPANASEGQKAFYQIQDPGTYTQLVLETAVIEILS 996
Query: 1249 LPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGASRS 1308
LPVSA+QIVSSLVQI+VNIQ TLIQ+ NG +GA+N VGQGSVLPTSPSGGSTDS+ ASRS
Sbjct: 997 LPVSAAQIVSSLVQIIVNIQSTLIQSGNGFHGAANGVGQGSVLPTSPSGGSTDSMSASRS 1056
Query: 1309 TPSVSGINTSSFVSRSGYT 1327
T + GINT+SFVSRSGYT
Sbjct: 1057 TCLIPGINTASFVSRSGYT 1075
Score = 258 bits (658), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 122/165 (73%), Positives = 141/165 (85%), Gaps = 3/165 (1%)
Query: 777 NLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTML 836
NLC+ L L + + +G TEFTETLNRIT++ LAI IKTRGIAD DH++YLQTML
Sbjct: 601 NLCLKLALQMEEALFVS---QGPTEFTETLNRITIMTLAITIKTRGIADPDHMVYLQTML 657
Query: 837 EQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSA 896
EQI+ATSQHTWSEKT+R+FPSLLR+ L GR+DKRGL+IQAWQQAETTVINQCTQLLSPSA
Sbjct: 658 EQILATSQHTWSEKTMRHFPSLLRETLKGRVDKRGLSIQAWQQAETTVINQCTQLLSPSA 717
Query: 897 DPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLR 941
+P YV TYLSHSFPQHRQYLCAGA +LMQGH ENINS NL+ +L+
Sbjct: 718 EPAYVSTYLSHSFPQHRQYLCAGACLLMQGHAENINSTNLMSLLK 762
Score = 80.1 bits (196), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 45/54 (83%), Gaps = 4/54 (7%)
Query: 4 NQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPP 57
+QSQR+ A+ +SSR+YQFHPARAAIIDLFNLYLGR SRQK D+S+RDPP
Sbjct: 2 DQSQRT----VAATPSSSRSYQFHPARAAIIDLFNLYLGRGSRQKPDESLRDPP 51
>gi|449464816|ref|XP_004150125.1| PREDICTED: uncharacterized protein LOC101220785 [Cucumis sativus]
Length = 2047
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/493 (69%), Positives = 392/493 (79%), Gaps = 52/493 (10%)
Query: 4 NQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKR 63
+QSQRS ++ + ++SRAYQFHPARAAI++LF+LYLGRS+R K +DS R+PPNK QKR
Sbjct: 2 DQSQRS---SSLTTVSTSRAYQFHPARAAIVNLFDLYLGRSNRLKHEDSAREPPNKAQKR 58
Query: 64 VLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAEFILFA 123
VLA+NRELPPRNEQFL+DFEQ+Q+QF D DQLR+VTESVLIS+VVQC HVPRAEF+LFA
Sbjct: 59 VLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRAEFLLFA 118
Query: 124 LRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTSSGIPNS 183
LRSLCSIGYINWDTFLPSLLSS+SSAE+S GQGSQA P VS T+L QSG+LP+S+ +PNS
Sbjct: 119 LRSLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSSNPVPNS 178
Query: 184 SNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTRVNS----- 238
S +QSSNPASPLP VHGI SPAQS+I+ S C A+SP+KSSD+S TG RVNS
Sbjct: 179 STFQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVNSFLRNN 238
Query: 239 -------------------------------------------SQGIDESDG-KSWRLDK 254
QG++ES+ KSWR DK
Sbjct: 239 AISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMKSWRPDK 298
Query: 255 ALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDMM 314
ALIEWLHSCLDV+WLLV+E++CRVPFYELLR+GLQFI+NIPDDEALFTL+LEIHRRRDMM
Sbjct: 299 ALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIHRRRDMM 358
Query: 315 AMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGEDLATS 374
AMHMQMLDQHLH PTFGT RI SQT NIS EA +LRYSPITYPSVLGEPLHGED+A++
Sbjct: 359 AMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHGEDIASA 418
Query: 375 IQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQGPTPGAVFTYDMISEAV 434
IQRG+ DWERAMRCIRHA+R TPSPDWWKRVLLVAP YR+ AQG +PGAVFT +MI EA
Sbjct: 419 IQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSEMICEAT 478
Query: 435 IDRIVELLKLTNS 447
IDRI ELLKLTNS
Sbjct: 479 IDRIFELLKLTNS 491
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/427 (75%), Positives = 362/427 (84%), Gaps = 9/427 (2%)
Query: 591 DRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMR 650
DR++DYMNMDDRS+GMFWVVSYTMAQPACETVMNWL+SAG EL NL NER+MVMR
Sbjct: 1571 DRIVDYMNMDDRSIGMFWVVSYTMAQPACETVMNWLTSAGAPELSSAQNLQTNERIMVMR 1630
Query: 651 EVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLF 710
EV+PLPMSLL+GFS+NLC KLA QME+S+F GQ V SIA+ ETYTRL+LLAPHSLFRS F
Sbjct: 1631 EVSPLPMSLLSGFSMNLCSKLAYQMEESLFSGQAVPSIALAETYTRLLLLAPHSLFRSHF 1690
Query: 711 SHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHR 770
++L + ++ + +L L RYQGK+K LMYD+TKIISALK KRGDHR
Sbjct: 1691 NNLIR---------CFFLVIWGTLRCFVLLLSRYQGKSKALMYDVTKIISALKGKRGDHR 1741
Query: 771 VLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVL 830
V RLAENLCMNLI S RDFF +KREGKG TEFTETLNR+ V+ LAI+IKTRGIADADH+L
Sbjct: 1742 VFRLAENLCMNLIFSLRDFFFVKREGKGPTEFTETLNRLAVVTLAILIKTRGIADADHLL 1801
Query: 831 YLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQ 890
YLQTMLEQ MATSQHTWSEKTLRYFP +LR+ LIGRIDKRG+ IQAWQQAETTVINQC Q
Sbjct: 1802 YLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGRIDKRGVAIQAWQQAETTVINQCNQ 1861
Query: 891 LLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTS 950
LLSPSADPTYV TY+SHSFPQH+QYLCAGAWILMQGHPE+IN L RVLREFSPEEVT+
Sbjct: 1862 LLSPSADPTYVMTYISHSFPQHKQYLCAGAWILMQGHPESINCTTLARVLREFSPEEVTA 1921
Query: 951 NIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDP 1010
NIYTMVDVLLHHI +E Q GHS QD+L K CAN+SFFV T ELLPLDILLLA IDRDDDP
Sbjct: 1922 NIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSFFVWTQELLPLDILLLAFIDRDDDP 1981
Query: 1011 HALRIVI 1017
+ALRIV+
Sbjct: 1982 NALRIVV 1988
>gi|449526148|ref|XP_004170076.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like, partial [Cucumis sativus]
Length = 479
Score = 606 bits (1562), Expect = e-170, Method: Compositional matrix adjust.
Identities = 308/439 (70%), Positives = 347/439 (79%), Gaps = 49/439 (11%)
Query: 58 NKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRA 117
NK QKRVLA+NRELPPRNEQFL+DFEQ+Q+QF D DQLR+VTESVLIS+VVQC HVPRA
Sbjct: 1 NKAQKRVLAINRELPPRNEQFLLDFEQIQNQFSDHDQLRAVTESVLISLVVQCSGHVPRA 60
Query: 118 EFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTS 177
EF+LFALRSLCSIGYINWDTFLPSLLSS+SSAE+S GQGSQA P VS T+L QSG+LP+S
Sbjct: 61 EFLLFALRSLCSIGYINWDTFLPSLLSSISSAEVSMGQGSQAAPTVSTTNLSQSGVLPSS 120
Query: 178 SGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTRVN 237
+ +PNSS +QSSNPASPLP VHGI SPAQS+I+ S C A+SP+KSSD+S TG RVN
Sbjct: 121 NPVPNSSTFQSSNPASPLPLVHGISSPAQSSIDPSSCTALSPIKSSDLSGTGLPSAVRVN 180
Query: 238 S------------------------------------------------SQGIDESDG-K 248
S QG++ES+ K
Sbjct: 181 SFLRNNAISSLRQLCCKIILSGLKFDLKPVTHADIFSHMLNWMVNWDQRQQGMEESENMK 240
Query: 249 SWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIH 308
SWR DKALIEWLHSCLDV+WLLV+E++CRVPFYELLR+GLQFI+NIPDDEALFTL+LEIH
Sbjct: 241 SWRPDKALIEWLHSCLDVVWLLVEENKCRVPFYELLRSGLQFIDNIPDDEALFTLMLEIH 300
Query: 309 RRRDMMAMHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHG 368
RRRDMMAMHMQMLDQHLH PTFGT RI SQT NIS EA +LRYSPITYPSVLGEPLHG
Sbjct: 301 RRRDMMAMHMQMLDQHLHSPTFGTQRIFSQTMQNISGEAVASLRYSPITYPSVLGEPLHG 360
Query: 369 EDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQGPTPGAVFTYD 428
ED+A++IQRG+ DWERAMRCIRHA+R TPSPDWWKRVLLVAP YR+ AQG +PGAVFT +
Sbjct: 361 EDIASAIQRGTRDWERAMRCIRHALRTTPSPDWWKRVLLVAPGYRSSAQGLSPGAVFTSE 420
Query: 429 MISEAVIDRIVELLKLTNS 447
MI EA IDRI ELLKLTNS
Sbjct: 421 MICEATIDRIFELLKLTNS 439
>gi|224099537|ref|XP_002311523.1| predicted protein [Populus trichocarpa]
gi|222851343|gb|EEE88890.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 288/414 (69%), Positives = 317/414 (76%), Gaps = 49/414 (11%)
Query: 5 QSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKTQKRV 64
QSQRS AA ++SASSR +QFHPARAAIIDLFNLYLGRSSRQK DDS R+ PNKTQKRV
Sbjct: 3 QSQRSITAAAASASASSRGHQFHPARAAIIDLFNLYLGRSSRQKPDDSARELPNKTQKRV 62
Query: 65 LALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRAEFILFAL 124
LALNRELPP NEQFL+DFEQL +QFPDQ+QLR+VTESVLI++VVQC +H PRA+F+LFAL
Sbjct: 63 LALNRELPPPNEQFLLDFEQLHTQFPDQEQLRAVTESVLITLVVQCSNHAPRADFLLFAL 122
Query: 125 RSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTSSGIPNSS 184
RSLCSI YINWD+FLPSLLSSVS+ E+S Q QA+PAVS+T L Q+GMLP+SS I NSS
Sbjct: 123 RSLCSIEYINWDSFLPSLLSSVSTTELSVSQAGQAVPAVSSTGLAQNGMLPSSSTISNSS 182
Query: 185 NYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTRVN------- 237
+QS NP SPL SVHGIGSPA +E S AMSPVKSSD+S G Q + RVN
Sbjct: 183 IFQSLNPTSPLSSVHGIGSPAPLGMEASPSVAMSPVKSSDISGNGPQSSARVNLLIRDSA 242
Query: 238 -----------------------------------------SSQGIDESDG-KSWRLDKA 255
G+DESDG KSWR KA
Sbjct: 243 MSSLRQLCCKIILTGLEFNLKPVTHADIFNHMLSWLVNWDQRQHGVDESDGVKSWRPVKA 302
Query: 256 LIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEALFTLILEIHRRRDMMA 315
LIEWLHSCLDVIWLLVDED+CRVPFYELLR+GLQFIENIPDDEALFTLILEIHRRRDMMA
Sbjct: 303 LIEWLHSCLDVIWLLVDEDKCRVPFYELLRSGLQFIENIPDDEALFTLILEIHRRRDMMA 362
Query: 316 MHMQMLDQHLHCPTFGTHRILSQTTPNISVEAAGNLRYSPITYPSVLGEPLHGE 369
MHMQMLDQHLHCPTFGTHR+LS T P +SVEA NLRYSPITYPSVLGEPLHGE
Sbjct: 363 MHMQMLDQHLHCPTFGTHRVLSPTIPTVSVEAVANLRYSPITYPSVLGEPLHGE 416
>gi|413938728|gb|AFW73279.1| hypothetical protein ZEAMMB73_787088 [Zea mays]
Length = 284
Score = 427 bits (1099), Expect = e-116, Method: Compositional matrix adjust.
Identities = 207/284 (72%), Positives = 238/284 (83%), Gaps = 3/284 (1%)
Query: 1282 SNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGL 1341
S +GQ S LPTSPSG + +S G +++ + +GIN ++FVSRSGY+CQQLS L+IQACGL
Sbjct: 2 SGGLGQSSGLPTSPSGAA-ESSGPNQANSAATGINATNFVSRSGYSCQQLSVLMIQACGL 60
Query: 1342 LLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAI 1401
LLAQLPP+FHMQLY EA+R+IK+ WWLADG R + ELDSAVGYALLDPTWA+QDNTSTAI
Sbjct: 61 LLAQLPPEFHMQLYSEAARVIKDCWWLADGSRPVKELDSAVGYALLDPTWASQDNTSTAI 120
Query: 1402 GNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFN 1461
GNIVALLHSFFSNLPQEWLE TH +IKHLRP+ SVAMLRI FRI+GPLLPRL A LF
Sbjct: 121 GNIVALLHSFFSNLPQEWLESTHTVIKHLRPVNSVAMLRIAFRILGPLLPRLAFARPLFM 180
Query: 1462 KTLALLLNTMGDVYGKN--TLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPE 1519
KTLALL N +GDV+GKN P PVEASEIAD+IDFLHH V YEGQGGPVQ++SKP+ E
Sbjct: 181 KTLALLFNVLGDVFGKNPQVSNPNPVEASEIADIIDFLHHAVMYEGQGGPVQSTSKPKLE 240
Query: 1520 VLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNPS 1563
+L L G+ E LRP+VQHLLSHLK D SSIYAATHPK+VQNPS
Sbjct: 241 ILTLCGKVIEILRPDVQHLLSHLKIDPTSSIYAATHPKLVQNPS 284
>gi|293331147|ref|NP_001170305.1| uncharacterized protein LOC100384269 [Zea mays]
gi|224034953|gb|ACN36552.1| unknown [Zea mays]
Length = 308
Score = 420 bits (1079), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/281 (72%), Positives = 234/281 (83%), Gaps = 3/281 (1%)
Query: 1282 SNSVGQGSVLPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGL 1341
S +GQ S LPTSPSG + +S G +++ + +GIN ++FVSRSGY+CQQLS L+IQACGL
Sbjct: 2 SGGLGQSSGLPTSPSGAA-ESSGPNQANSAATGINATNFVSRSGYSCQQLSVLMIQACGL 60
Query: 1342 LLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAI 1401
LLAQLPP+FHMQLY EA+R IK+ WWLADG R + ELDSAVGYALLDPTWA+QDNTSTAI
Sbjct: 61 LLAQLPPEFHMQLYSEAARAIKDCWWLADGSRPVKELDSAVGYALLDPTWASQDNTSTAI 120
Query: 1402 GNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHTLFN 1461
GNIVALLHSFFSNLPQEWLE TH +IKHLRP+ SVAMLRI FRI+GPLLPRL A LF
Sbjct: 121 GNIVALLHSFFSNLPQEWLESTHTVIKHLRPVNSVAMLRIAFRILGPLLPRLAFARPLFM 180
Query: 1462 KTLALLLNTMGDVYGKN--TLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPE 1519
KTLALL N +GDV+GKN P PVEASEIAD+IDFLHH V YEGQGGPVQ++SKP+ E
Sbjct: 181 KTLALLFNVLGDVFGKNPQVSNPNPVEASEIADIIDFLHHAVMYEGQGGPVQSTSKPKLE 240
Query: 1520 VLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQ 1560
+L L G+ E LRP+VQHLLSHLK D SSIYAATHPK+VQ
Sbjct: 241 ILTLCGKVIEILRPDVQHLLSHLKIDPTSSIYAATHPKLVQ 281
>gi|449521180|ref|XP_004167608.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Cucumis sativus]
Length = 409
Score = 395 bits (1014), Expect = e-106, Method: Compositional matrix adjust.
Identities = 234/451 (51%), Positives = 277/451 (61%), Gaps = 110/451 (24%)
Query: 614 MAQPACETVMNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLAL 673
MAQPACETVMNWL+SAG EL NL NER+MVMREV+PLPMSLL+GFS+NLC KLA
Sbjct: 1 MAQPACETVMNWLTSAGAPELSSAQNLQTNERIMVMREVSPLPMSLLSGFSMNLCSKLAY 60
Query: 674 QMEDSIFGGQVVASIAMVETYTRLMLLAPHSLFRSLFS-------HLAQRNPSLLAKVGV 726
QME+S+F GQ V SIA+ ETYTRL+LLAPHSLFRS F+ HLAQRNPSLL++ GV
Sbjct: 61 QMEESLFSGQAVPSIALAETYTRLLLLAPHSLFRSHFNLTHSLLQHLAQRNPSLLSRPGV 120
Query: 727 TPLVLEIVNYRLLPLYR---------------------------------------YQGK 747
T LVLEI+NYRLLPLYR G
Sbjct: 121 TLLVLEILNYRLLPLYRASSWSIQSSSLKKQSQRLRRSMIHSCSNGSFNSRLAIKNISGP 180
Query: 748 TKTLMYDITKIISALKVK-RGDHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETL 806
+K+ I+ + + ++ +G + L ++ + +R + +G TEFTETL
Sbjct: 181 SKSRDKSISYVEAVKDIRYQGKSKALMYDVTKIISALKGKRG------DHRGPTEFTETL 234
Query: 807 NRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGR 866
NR+ V+ LAI+IKTRGIADADH+LYLQTMLEQ MATSQHTWSEKTLRYFP +LR+ LIGR
Sbjct: 235 NRLAVVTLAILIKTRGIADADHLLYLQTMLEQTMATSQHTWSEKTLRYFPPVLREVLIGR 294
Query: 867 IDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQG 926
IDKRG+ IQAWQQA +L +
Sbjct: 295 IDKRGVAIQAWQQAR----------------------------------------VLREF 314
Query: 927 HPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISF 986
PE EVT+NIYTMVDVLLHHI +E Q GHS QD+L K CAN+SF
Sbjct: 315 SPE-----------------EVTANIYTMVDVLLHHIQIEPQHGHSTQDILLKVCANLSF 357
Query: 987 FVLTHELLPLDILLLALIDRDDDPHALRIVI 1017
FV T ELLPLDILLLA IDRDDDP+ALRIV+
Sbjct: 358 FVWTQELLPLDILLLAFIDRDDDPNALRIVV 388
>gi|255622028|ref|XP_002540252.1| hypothetical protein RCOM_2112670 [Ricinus communis]
gi|223497650|gb|EEF22131.1| hypothetical protein RCOM_2112670 [Ricinus communis]
Length = 223
Score = 269 bits (688), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 142/180 (78%), Positives = 159/180 (88%)
Query: 58 NKTQKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTESVLISMVVQCCSHVPRA 117
NKTQKRVLALNRELPPRNEQFLI+FEQLQSQFPDQDQLRSVTESVLIS+V+QCC+H PRA
Sbjct: 1 NKTQKRVLALNRELPPRNEQFLINFEQLQSQFPDQDQLRSVTESVLISLVIQCCNHAPRA 60
Query: 118 EFILFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQGSQAMPAVSATSLQQSGMLPTS 177
EF+LFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQ Q + A+S+ + Q+ +LP+S
Sbjct: 61 EFLLFALRSLCSIGYINWDTFLPSLLSSVSSAEMSAGQAGQTVSAISSMNSSQNVILPSS 120
Query: 178 SGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTGQQFTTRVN 237
S IPNSSN+Q SNP SPL SVHGIGSP QSAIE S+ A +SPVKSSD+S GQ T+RVN
Sbjct: 121 SAIPNSSNFQPSNPTSPLASVHGIGSPVQSAIEPSLLATVSPVKSSDISGNGQPSTSRVN 180
>gi|358347248|ref|XP_003637671.1| hypothetical protein MTR_097s0013, partial [Medicago truncatula]
gi|355503606|gb|AES84809.1| hypothetical protein MTR_097s0013, partial [Medicago truncatula]
Length = 316
Score = 228 bits (581), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/133 (79%), Positives = 118/133 (88%)
Query: 1339 CGLLLAQLPPDFHMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTS 1398
CGLLLAQLP DFH QLY+E +RIIKE+WWL D KRSL E+DSAVGYALLDPTWAAQDNTS
Sbjct: 1 CGLLLAQLPSDFHSQLYLETTRIIKENWWLTDVKRSLAEIDSAVGYALLDPTWAAQDNTS 60
Query: 1399 TAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRPITSVAMLRIVFRIMGPLLPRLVNAHT 1458
TAIGN+VALLHSFFSNLPQEWLEGT+VIIK LRP+TSVAMLRI FRIM PLLP+L NAH
Sbjct: 61 TAIGNVVALLHSFFSNLPQEWLEGTNVIIKQLRPVTSVAMLRIAFRIMSPLLPKLANAHA 120
Query: 1459 LFNKTLALLLNTM 1471
LFNK ++ +T+
Sbjct: 121 LFNKVHKIINSTV 133
Score = 162 bits (411), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/119 (65%), Positives = 96/119 (80%), Gaps = 6/119 (5%)
Query: 1451 PRLVNAHTLF------NKTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFLHHVVHYE 1504
PR V T++ N TL++LL+ + DV+GKN+ V+ASEIAD+IDFLHHV+HYE
Sbjct: 198 PRSVGPPTIYIPCSKPNNTLSILLSVLVDVFGKNSQTSTAVDASEIADIIDFLHHVIHYE 257
Query: 1505 GQGGPVQASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNPS 1563
GQGGPVQASSKPRP+VL L GRAAESLRP++QHLLSHL DVNSS+YAA+HPK+V NP+
Sbjct: 258 GQGGPVQASSKPRPDVLALIGRAAESLRPDIQHLLSHLNTDVNSSVYAASHPKLVPNPT 316
>gi|224111458|ref|XP_002315863.1| predicted protein [Populus trichocarpa]
gi|222864903|gb|EEF02034.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 221 bits (563), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/115 (90%), Positives = 109/115 (94%)
Query: 1291 LPTSPSGGSTDSLGASRSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDF 1350
LPTSP GGSTDSLG SRS+PSVSGINTS+FV RSGYTCQQLSCLLIQACGLLLAQLPPDF
Sbjct: 31 LPTSPYGGSTDSLGGSRSSPSVSGINTSNFVLRSGYTCQQLSCLLIQACGLLLAQLPPDF 90
Query: 1351 HMQLYMEASRIIKESWWLADGKRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIV 1405
H+QLYMEASRIIKESWWL DGKRSLGELDSAVGYALLDPTWAAQDNTSTAI ++
Sbjct: 91 HVQLYMEASRIIKESWWLTDGKRSLGELDSAVGYALLDPTWAAQDNTSTAIAQVM 145
>gi|255647160|gb|ACU24048.1| unknown [Glycine max]
Length = 126
Score = 204 bits (520), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 109/126 (86%)
Query: 1438 MLRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFL 1497
MLRI FR+MGPLLP+L NAH LFNKTL+ LL + DV+GKN+ V+AS+IAD+IDFL
Sbjct: 1 MLRIAFRVMGPLLPKLANAHALFNKTLSSLLTILVDVFGKNSQTSIAVDASDIADIIDFL 60
Query: 1498 HHVVHYEGQGGPVQASSKPRPEVLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPK 1557
HHVVHYEGQGGPVQASSKPRPEVL L GRA+ESLRP++QHLLSHL PDVNSS+YAA HPK
Sbjct: 61 HHVVHYEGQGGPVQASSKPRPEVLALIGRASESLRPDIQHLLSHLNPDVNSSVYAAFHPK 120
Query: 1558 MVQNPS 1563
+ QNP+
Sbjct: 121 LAQNPT 126
>gi|224099541|ref|XP_002311525.1| predicted protein [Populus trichocarpa]
gi|222851345|gb|EEE88892.1| predicted protein [Populus trichocarpa]
Length = 110
Score = 175 bits (444), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/103 (79%), Positives = 93/103 (90%)
Query: 1460 FNKTLALLLNTMGDVYGKNTLPPAPVEASEIADLIDFLHHVVHYEGQGGPVQASSKPRPE 1519
F KTL+LLLNTM DV+G+N+ VEASEIADL+DFLHHVVHYEGQGGPVQA+SKP+ E
Sbjct: 7 FRKTLSLLLNTMVDVFGRNSQTSTAVEASEIADLVDFLHHVVHYEGQGGPVQANSKPKAE 66
Query: 1520 VLVLTGRAAESLRPEVQHLLSHLKPDVNSSIYAATHPKMVQNP 1562
VL L GRAAESLRP++QHLLSHLKPD+NSSIYAATHPK+VQNP
Sbjct: 67 VLALCGRAAESLRPDLQHLLSHLKPDMNSSIYAATHPKLVQNP 109
>gi|255594742|ref|XP_002536154.1| conserved hypothetical protein [Ricinus communis]
gi|223520667|gb|EEF26229.1| conserved hypothetical protein [Ricinus communis]
Length = 254
Score = 173 bits (438), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 113/189 (59%), Gaps = 49/189 (25%)
Query: 170 QSGMLPTSSGIPNSSNYQSSNPASPLPSVHGIGSPAQSAIETSVCAAMSPVKSSDVSCTG 229
Q+ +LP+SS IPNSSN+Q SNP SPL SVHGIGSP QSAIE S+ A +SPVKSSD+S G
Sbjct: 5 QNVILPSSSAIPNSSNFQPSNPTSPLASVHGIGSPVQSAIEPSLLATVSPVKSSDISGNG 64
Query: 230 QQFTTRVNSS------------------------------------------------QG 241
Q T+RVN S G
Sbjct: 65 QPSTSRVNLSSRDNAICSLRQLCCKIILTGLEFNLKPATHSEIFHHMLNWLVNWDQRQHG 124
Query: 242 IDESDG-KSWRLDKALIEWLHSCLDVIWLLVDEDRCRVPFYELLRTGLQFIENIPDDEAL 300
+DESD +SWR +KALIEWLHSCLDVIWLLVDE++CRVPFYELLR+GLQFIENIP +
Sbjct: 125 VDESDSVRSWRPEKALIEWLHSCLDVIWLLVDENKCRVPFYELLRSGLQFIENIPTAQKK 184
Query: 301 FTLILEIHR 309
L I R
Sbjct: 185 QDLANSIQR 193
Score = 114 bits (285), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/57 (85%), Positives = 53/57 (92%)
Query: 369 EDLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQGPTPGAVF 425
+DLA SIQRGSLDWERA+RCIRHA+R TPSPDWWKRVLLVAP YR+PA GPTPGAVF
Sbjct: 185 QDLANSIQRGSLDWERALRCIRHALRTTPSPDWWKRVLLVAPSYRSPAHGPTPGAVF 241
>gi|255596295|ref|XP_002536505.1| hypothetical protein RCOM_2148230 [Ricinus communis]
gi|223519465|gb|EEF25878.1| hypothetical protein RCOM_2148230 [Ricinus communis]
Length = 95
Score = 166 bits (421), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 85/101 (84%), Positives = 88/101 (87%), Gaps = 6/101 (5%)
Query: 1 MDQNQSQRSSIGAATASSASSRAYQFHPARAAIIDLFNLYLGRSSRQKQDDSIRDPPNKT 60
MDQNQ SI A TA+S R YQF PARAAIIDLFNLYLGRSSRQK DDS R+PPNKT
Sbjct: 1 MDQNQR---SIAATTAAS---RGYQFQPARAAIIDLFNLYLGRSSRQKHDDSTREPPNKT 54
Query: 61 QKRVLALNRELPPRNEQFLIDFEQLQSQFPDQDQLRSVTES 101
QKRVLALNRELPPRNEQFLI+FEQLQSQFPDQDQLRSVTES
Sbjct: 55 QKRVLALNRELPPRNEQFLINFEQLQSQFPDQDQLRSVTES 95
>gi|376335839|gb|AFB32579.1| hypothetical protein 0_15187_01, partial [Larix decidua]
gi|376335841|gb|AFB32580.1| hypothetical protein 0_15187_01, partial [Larix decidua]
gi|376335843|gb|AFB32581.1| hypothetical protein 0_15187_01, partial [Larix decidua]
Length = 151
Score = 164 bits (416), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 86/151 (56%), Positives = 109/151 (72%)
Query: 1247 LSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGAS 1306
LSLP S QIVS+LVQIVV++QPT +Q+S+ G S+ + Q S+LPTSPSGG+ DS+ +
Sbjct: 1 LSLPPSVPQIVSTLVQIVVHVQPTQVQSSHSVQGMSSGISQSSMLPTSPSGGTGDSMSTN 60
Query: 1307 RSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESW 1366
+ST S G+N + + Q S L+IQACGLLLAQLP FHMQ Y+EA+R+IK+ W
Sbjct: 61 KSTASAPGLNATGTGLGNSSAAQASSSLMIQACGLLLAQLPSPFHMQFYLEAARVIKDCW 120
Query: 1367 WLADGKRSLGELDSAVGYALLDPTWAAQDNT 1397
WL D ++ ELDSA GYAL DPTWA QDNT
Sbjct: 121 WLTDVTKTSLELDSAFGYALWDPTWAFQDNT 151
>gi|376335849|gb|AFB32584.1| hypothetical protein 0_15187_01, partial [Pinus mugo]
Length = 151
Score = 162 bits (410), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/151 (55%), Positives = 107/151 (70%)
Query: 1247 LSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGAS 1306
LSLP S QIVS+LVQIVV++QP+ +Q+S G S+ + Q S++PTSPSGG+ DS+ +
Sbjct: 1 LSLPPSVPQIVSTLVQIVVHVQPSQVQSSLSTQGMSSGISQSSIMPTSPSGGTADSMSTN 60
Query: 1307 RSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESW 1366
+ST S G+N S S + Q S L+IQACGLLLAQLP FHM Y EA+R+IK+ W
Sbjct: 61 KSTASAPGLNASGTGSGNSSAAQASSSLMIQACGLLLAQLPSPFHMHFYAEAARVIKDCW 120
Query: 1367 WLADGKRSLGELDSAVGYALLDPTWAAQDNT 1397
W+ D ++ ELDSA GYAL DPTWA QDNT
Sbjct: 121 WVTDVTKTSLELDSAFGYALWDPTWAFQDNT 151
>gi|361067285|gb|AEW07954.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|376335845|gb|AFB32582.1| hypothetical protein 0_15187_01, partial [Pinus cembra]
gi|376335847|gb|AFB32583.1| hypothetical protein 0_15187_01, partial [Pinus cembra]
Length = 151
Score = 161 bits (407), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/151 (55%), Positives = 107/151 (70%)
Query: 1247 LSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGAS 1306
LSLP S QIVS+LVQIVV++QP+ +Q+S G S+ + Q S++PTSPSGG+ DS+ +
Sbjct: 1 LSLPPSVPQIVSTLVQIVVHVQPSQVQSSLSTQGMSSGISQSSIMPTSPSGGTADSMSTN 60
Query: 1307 RSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESW 1366
+S+ S GIN S S + Q S L+IQACGLLLAQLP FHM Y EA+R+IK+ W
Sbjct: 61 KSSASAPGINASGTGSGNSSAAQASSSLMIQACGLLLAQLPSLFHMHFYAEAARVIKDCW 120
Query: 1367 WLADGKRSLGELDSAVGYALLDPTWAAQDNT 1397
W+ D ++ ELDSA GYAL DPTWA QDNT
Sbjct: 121 WVTDVTKTSLELDSAFGYALWDPTWAFQDNT 151
>gi|383165037|gb|AFG65351.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165038|gb|AFG65352.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165039|gb|AFG65353.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165040|gb|AFG65354.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165041|gb|AFG65355.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165042|gb|AFG65356.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165043|gb|AFG65357.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165044|gb|AFG65358.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165045|gb|AFG65359.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165046|gb|AFG65360.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165047|gb|AFG65361.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165048|gb|AFG65362.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165049|gb|AFG65363.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165050|gb|AFG65364.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165051|gb|AFG65365.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165052|gb|AFG65366.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
gi|383165053|gb|AFG65367.1| Pinus taeda anonymous locus 0_15187_01 genomic sequence
Length = 151
Score = 160 bits (405), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 106/151 (70%)
Query: 1247 LSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQGSVLPTSPSGGSTDSLGAS 1306
LSLP S QIVS+LVQIVV++QP+ +Q+ G S+ + Q S++PTSPSGG+ DS+ +
Sbjct: 1 LSLPPSVPQIVSTLVQIVVHVQPSQVQSGLSTQGMSSGISQSSIMPTSPSGGTADSMSTN 60
Query: 1307 RSTPSVSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESW 1366
+ST S G+N S S + Q S L+IQACGLLLAQLP FHM Y EA+R+IK+ W
Sbjct: 61 KSTASAPGLNASGTGSGNSSAAQASSSLMIQACGLLLAQLPSPFHMHFYAEAARVIKDCW 120
Query: 1367 WLADGKRSLGELDSAVGYALLDPTWAAQDNT 1397
W+ D ++ ELDSA GYAL DPTWA QDNT
Sbjct: 121 WVTDVTKTSLELDSAFGYALWDPTWAFQDNT 151
>gi|255591729|ref|XP_002535579.1| conserved hypothetical protein [Ricinus communis]
gi|223522616|gb|EEF26804.1| conserved hypothetical protein [Ricinus communis]
Length = 56
Score = 110 bits (275), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 49/56 (87%), Positives = 52/56 (92%)
Query: 370 DLATSIQRGSLDWERAMRCIRHAIRATPSPDWWKRVLLVAPCYRNPAQGPTPGAVF 425
DLA SIQRGSLDWERA+RCIRHA+R TPSPDWWKRVLLVAP YR+PA GPTPGAVF
Sbjct: 1 DLANSIQRGSLDWERALRCIRHALRTTPSPDWWKRVLLVAPSYRSPAHGPTPGAVF 56
>gi|330842176|ref|XP_003293059.1| hypothetical protein DICPUDRAFT_157857 [Dictyostelium purpureum]
gi|325076644|gb|EGC30414.1| hypothetical protein DICPUDRAFT_157857 [Dictyostelium purpureum]
Length = 1559
Score = 99.8 bits (247), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 170/836 (20%), Positives = 356/836 (42%), Gaps = 142/836 (16%)
Query: 429 MISEAVIDRIVELL-KLTNSEVN------CWHDWLIFSDVFFFLVKSGCIDFVDFVDKLV 481
+I+EA I + ++LL K ++ W +W++FSD F+ LV+ ID ++ L
Sbjct: 414 IITEAAILKTLQLLNKYPKQSIDNQITSDSWKEWILFSDQFYSLVEGTLIDLEQYIVGLS 473
Query: 482 -SRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVET------TRKILSFHRED 534
R+ DGD ++ N V +L +I + V D + V T +LSF +
Sbjct: 474 EKRMNDGDT--IKDNMVLYLFTKITNITEVKQLFMQDLQIVNANNFGYLTPIVLSFCNNN 531
Query: 535 RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQK--GKQIDE---------- 582
+ +S QNL ++ + + + +Q + +D+
Sbjct: 532 EV------------YTASSQNLSLYFFLLKISKDIPDADIQSYVKRVLDKCQFNHAIFPF 579
Query: 583 ---WWRQVSKGDRMMDYMNM--DDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTELFPG 637
WW V + + +++ D R ++ V T ++ E + + S+ FPG
Sbjct: 580 YRNWW-DVERSKQKQEFITTTEDIRLYSIYCTVIPTDSE--AEIIKYYYSNTEQQYYFPG 636
Query: 638 SNLPPNERLMVMREVNPLPMSLLTGFSLNL---CLKLALQMEDSIFGGQVVASIAMVETY 694
+ V +V P+ +L LN+ C K LQ + + A +E Y
Sbjct: 637 G-------IKVNGKVKPVSNLIL----LNMPHRCRKNLLQEFSMLLDKDGLIPPAFLEDY 685
Query: 695 TRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYD 754
+L+ P SL + S+L + + K VLE+V++RL L + + ++
Sbjct: 686 NKLVHYTPSSLLQLPLSYLKR-----IEKTIPYHTVLELVSHRLFKLLKGNKELPIILKT 740
Query: 755 ITKI-----ISALKVKRG-DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNR 808
+ + I L++ + D+ +L+++ + ++ ILS +DF LK G LNR
Sbjct: 741 LQDVQSLKPIQNLQLSKSIDYLILKISNSFGID-ILSNKDF--LKTLNIGPL-----LNR 792
Query: 809 ITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRID 868
+ +A +IK +GI++ V + +E + +S+ +L +FP ++ A +I+
Sbjct: 793 RVITTIARLIKIKGISEYSRVQDVPIFIENAYKNYPYMFSKTSLEFFPDFMK-AEFEKIN 851
Query: 869 KRGL------TIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQ-------Y 915
+ + IQ Q + ++ +Q ++LL + QH Q +
Sbjct: 852 HQPIKPPTLQKIQHENQQKLSLFSQGSKLLVQQK----------QNILQHYQQENNTSLF 901
Query: 916 LCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQ- 974
C +++ +N L++ L P I + + + I E+ HS
Sbjct: 902 FCQIFVYILEAKIKNEILMPLVQQLVFVPPGIGNVQITKLTAIFVDFILDEVIANHSQNK 961
Query: 975 -DLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-ITLLDRQELQQRVKLY 1032
DL+ K + ++ +++ L+ ++L L+DRDD+ ++ +I+ + L E+++RV+ +
Sbjct: 962 ADLVKKVSEILCQWIFKYKIFSLNTIILFLLDRDDNIYSYQILDLMLFSSSEIKERVQFF 1021
Query: 1033 --------CMNRGPPEHWL----YSGLFKRVELQKALGNHLSWKE------RYPTFFDDI 1074
+ + ++L ++ LF +L L + + E P ++ +
Sbjct: 1022 EQKHFRDNVVYKTDDNYFLKNIEFNSLFN--DLIPTLTDPTTHSEISFPGAALPIYYSNT 1079
Query: 1075 AARLLPVIPLIVYRLIENDAMDSADRVLATYS-SFLAYYPLRFSFVRDILAYFYGHLPGK 1133
+R +P++ +++ + +E D D ++++ + + Y+ + + ++++L Y++ +
Sbjct: 1080 ISRFIPIMDIMMSKCVELDRKDLLEKLIDQFQVPYRYYHDEKETTIKELLIYYFDSKMFQ 1139
Query: 1134 -------LIVRILNVFDLSKIPFSESFPQHISSSNPVMCPP----LDYFATLLLGL 1178
L V++LN FD ++ F+ F Q++ + P DYF L+ L
Sbjct: 1140 TSPDSKLLFVKLLN-FD-NETKFTSYFNQYLKTQKIEEFPNNDNYKDYFRELITPL 1193
>gi|290996810|ref|XP_002680975.1| predicted protein [Naegleria gruberi]
gi|284094597|gb|EFC48231.1| predicted protein [Naegleria gruberi]
Length = 1675
Score = 81.6 bits (200), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 182/874 (20%), Positives = 332/874 (37%), Gaps = 224/874 (25%)
Query: 569 LNNEQLQKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 628
LN + K+ +EW K + N+D+ + +++S +P+ + ++++L
Sbjct: 650 LNKDDQAHIKEFEEWRNTYGK-----NLYNLDEIGLKRLFLLSSYFTKPSSDFLIDFLKK 704
Query: 629 AGVTELFPGSNLPPNE----RLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIF---- 680
+ E PN+ L E +P+S+ N+ L L++ +F
Sbjct: 705 PDLVE---SIKTIPNDSGKIELFYPFEGKIVPLSV------NMILVLSVHARHRLFDSLC 755
Query: 681 --------------GG-----------QVVASIAMVETYTRLMLLAPHSL--FRSLFSHL 713
GG + A+VET +R + P ++ F+ L
Sbjct: 756 DSLKNLTPPQPKTDGGNSQPTTTDNFTEAYIPPAIVETLSRTLYCLPFAVNNFKDLLEGK 815
Query: 714 AQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTK--TLMYDITKIISALKVKRGDHRV 771
+ N + LEI+N+RL+ RY G L +I I ++ HR+
Sbjct: 816 TRSN-------HCNYVFLEIINFRLMRYLRYFGGDIFFHLYIEIYLAIGNTTLENNHHRL 868
Query: 772 LRLAENLCMNLIL-----SQR--DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIA 824
L EN C+ +L S+R FF + +ET R + A + K I
Sbjct: 869 YLLLENFCIKAMLYLITDSKRVVHFFDKNASKLPPEKISETFKRTLISACMKVFKLSPIK 928
Query: 825 DADHVLYLQTMLEQIMATSQHTWSE-----KTLRYFPSLLRDALIGRIDKRGLTIQAWQQ 879
++ + +L+++++ T E R +P ++ + + I +
Sbjct: 929 -LTNLDKSKKVLQRLVSVCGKTVEEFGKLTSKTRLYPDFIKTSF------ENIKITE-TE 980
Query: 880 AETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAW-----ILMQGHPENINSA 934
A +TV Q P DP + + + LC W + + ENI +
Sbjct: 981 APSTVAQQKNDPKKPE-DPKEILKKVEN--------LCDSFWDKRDKVSTMKNLENIPHS 1031
Query: 935 NLL------RVL-REFSPEEV----------------TSNIYTMVD-VLLHHIHVELQRG 970
N L RV +EFS E+V ++Y M++ VL + E + G
Sbjct: 1032 NYLLCAIWSRVFEKEFSKEKVAFWKKWIPMLLPPRLLVDSVYKMINHVLDEFLSEENESG 1091
Query: 971 HSLQDLLFK---ACANISFFVLTHELLPLDILLLALIDR--DDDP--------------- 1010
+ + K + ++ + E LPL+ + LALIDR ++DP
Sbjct: 1092 DQDESIFVKVKQVSSTLTKLIWEFEFLPLETVCLALIDRAKNEDPNLSNKPTEDSTEKKA 1151
Query: 1011 ----HALRIVITLLDRQELQQRVKLYC-MNRGPPEHWLYSGLFKRVELQKALGNHLSWKE 1065
+A I++ ++ + +RV L+ +NR P LF ++ H +
Sbjct: 1152 IEHKYAHNILLLIITDNQFSKRVDLFLDLNRNP-------NLF---DVNDNFTAHHKYHS 1201
Query: 1066 RY----------------PTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFL 1109
+Y P+++++I R++P++ LI RL E + D ++L Y
Sbjct: 1202 QYPEGFGAMKTDDFLNANPSYYNNICLRMIPILDLICRRLCELNLFDFLRQILDKYGGLF 1261
Query: 1110 AYYPLRFSFVRDILAYFYGHLPGKLIVRILNV------FDLSKIPFSES------FPQHI 1157
AY+ +FV+++L Y Y LP ++ + + + LS + S S F +
Sbjct: 1262 AYHDYPMTFVKELLLY-YVDLPIEIKEMLFTIICKNEKYLLSDMDASFSAVAKSHFGISV 1320
Query: 1158 SSSNPV---------MCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSP 1208
SN + L YF TL+ ++ V+P + RA H
Sbjct: 1321 DDSNFIKKTGKTYIDQTFDLHYFLTLITN-ISEVLPTIQ-----------EPRANH---- 1364
Query: 1209 MTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQ 1268
+ P ++ FY+ + +L L +IE++ LP++ +I+S LV + IQ
Sbjct: 1365 --TYINPKHI------FYEFSNTF---ELRLNAGIIEVMCLPLTLQEIISKLVDCL--IQ 1411
Query: 1269 PTLIQTSNGPYGASNSVG------QGSVLPTSPS 1296
T + + + S + G PTSPS
Sbjct: 1412 NTSVCPPHQLFKCSYTTGLFLASLPNYSTPTSPS 1445
>gi|405964696|gb|EKC30149.1| Mediator of RNA polymerase II transcription subunit 23 [Crassostrea
gigas]
Length = 1034
Score = 80.1 bits (196), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 150/694 (21%), Positives = 284/694 (40%), Gaps = 133/694 (19%)
Query: 632 TELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVA 686
T L PG+ ++ PL MSLL +++ + L + + +
Sbjct: 197 TTLLPGN-------IVASAPTQPLAMSLLDSLTVHAKMSLIHSIVHRVIKQAKSKATIAQ 249
Query: 687 SIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LP 740
S A++ETY+RL++ + SL F ++Q P++ G+ +LE+ +YRL P
Sbjct: 250 SPALIETYSRLLVYMEIESLGIKGF--ISQLLPTVFTHNAWGILHTLLEMFSYRLHHTQP 307
Query: 741 LYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ--RDFFSL 792
YR Q L+ + + + + + + LRL L + Q R F
Sbjct: 308 HYRIQ-----LLSHLHHLSQSPQTNQNQLQLCMESTALRLITGLGSFEVQPQLSRIFNEP 362
Query: 793 KREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTL 852
R G S E +E LNR+ V+ +A + G+ D+ + + +L QIMA + H WS TL
Sbjct: 363 GRPGFLSNE-SEELNRVLVLTIARAMHVTGV-DSFSSTWPREILNQIMANTPHNWSPNTL 420
Query: 853 RYFPSLLRDALIG----RIDKRGL--TIQAWQQAETTVINQCTQLLSPSADPTYVKTYLS 906
FP L + R DK L ++A + T+ N+ + S +
Sbjct: 421 ANFPPSLAEFFQAQPQHRDDKNTLKRNVEAEYKKWKTMANENDIIAHFSMQGSSTV---- 476
Query: 907 HSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVE 966
+LC W + I +VL P V++++ T D ++ +++
Sbjct: 477 --------FLCI-IWKNLLEENRGITPI-AYKVLDRLGPRSVSAHLRTFSDYIVSELNLN 526
Query: 967 LQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA----LRIVITLLDR 1022
G KA +++ V + ++ +D L+L L R+ D A L I + LL
Sbjct: 527 SAGGQHFH----KAIDSLNEMVWRYNIVTIDRLILCLALRNVDEDARLCYLLIHMLLLKP 582
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
Q+ + RV+ + + PEHWL + +K + H + E++
Sbjct: 583 QDFKSRVQEF-VKENSPEHWLQNNWH-----EKHMAFHRKYPEKFYFEGIQDLSSPIQHQ 636
Query: 1068 --PTFFDDIAARLLPVIPLIVYRLIENDAMDSA-----DRVLATYSSFLAYYPLRFSFVR 1120
P +F ++ R LPV+ ++++R++E ++ + +++L + ++ +++
Sbjct: 637 YLPVYFGNVCLRFLPVLDILLHRILEQPSLTTNNLNLFEKILESLGVLYKFHDHPITYLY 696
Query: 1121 DILAYFYGHL------PGKLIVRILNVFDL---SKIPFSESFPQHISSSNPVMCPPLDYF 1171
+ L Y++ L +L+ I N S +E + + + P LDY+
Sbjct: 697 NTLHYYHKILVQRAAYKRRLVTTIWNAHQEIRPSTWFLTEDYQRFSHEESLEWVPDLDYY 756
Query: 1172 ATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDP 1231
++ LV+ T+D KSP + ++ N+ P
Sbjct: 757 VRIIGRLVD--------------TIDG-------KSPFPN-----------CDWRFNEFP 784
Query: 1232 GTYTQLVLETAVIEILSLPVSASQIVSSLVQIVV 1265
G + T V E+++LPV + + +SL+ +V+
Sbjct: 785 GPAAHALYVTCV-ELMALPVPGNVVGNSLLDVVM 817
>gi|195121768|ref|XP_002005391.1| GI19099 [Drosophila mojavensis]
gi|193910459|gb|EDW09326.1| GI19099 [Drosophila mojavensis]
Length = 1422
Score = 76.6 bits (187), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 143/697 (20%), Positives = 280/697 (40%), Gaps = 104/697 (14%)
Query: 658 SLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQR 716
SL ++L QM +V + A++ETY RL++ SL + L Q
Sbjct: 530 SLTVHSKMSLIHSFVTQMLKQAQSKTLVPAPALIETYARLLVYTEIESL--GIKGFLTQL 587
Query: 717 NPSLLAKVGVTPL--VLEIVNYRLLPL---YRYQGKTKTLMYDITKIISALKVKRG-DHR 770
P++ L ++E+ +YRL + YR Q + + +++ +
Sbjct: 588 LPTVFKNHAWAMLHTLMEMFSYRLHHVPTHYRVQLLSLLYSLSSVPQTNKMQLNLCFEST 647
Query: 771 VLRLAENLCMNLILSQ-RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHV 829
LRL ++ SQ + + K G ++ +E LNR+ ++ LA + G D +
Sbjct: 648 ALRLITSIGSAEFQSQFSRYLNDKSPGGVASNESEELNRVLILTLARSMHVHGGGD-ELA 706
Query: 830 LYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCT 889
+ + L IM + H+W ++L FP L + + + ++ QQ + +V +
Sbjct: 707 GWCKDFLSNIMQHTPHSWPVQSLACFPHALNEYFL----QNNHPVENKQQLKKSVEEEYR 762
Query: 890 QLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVT 949
S S + + ++ + + +LC I+ + E+I S ++L S ++
Sbjct: 763 NWTSMSNENDIIAHFIRPN--TNPLFLCLLFKIIWET--ESI-SPVAYKILEGISARALS 817
Query: 950 SNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDD 1009
+++ D L+ E+ +D + K I+ + ++ +D L+L L R +
Sbjct: 818 THLRKFCDYLV----AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRLVLCLALRTHE 873
Query: 1010 PHALRIVIT-----LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWK 1064
+ ++ + LL EL+ RV+ +C + P +HW S +K L H ++
Sbjct: 874 GNEAQVCLITIQLLLLKASELRNRVQEFCKDNNP-DHWKQSNWH-----EKHLQFHQNYP 927
Query: 1065 ERY-----------PTFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLA 1110
E++ P +F ++ R LPV+ ++V+R IE + +L S
Sbjct: 928 EKFAPDESASQIPLPVYFSNVCLRFLPVLDVVVHRFIELTIPNVHQILGIILDHLSILYK 987
Query: 1111 YYPLRFSFVRDILAYF----YGHLP--GKLIVRILNVFDL---SKIPFSESFPQHISSSN 1161
++ +++ + L Y+ LP KL+ I + F + SE + ++ S +
Sbjct: 988 FHDRPITYLYNTLHYYERILRDRLPLKKKLVSAITSAFSEIRPANWCVSEPYKVYLQSQD 1047
Query: 1162 PVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEG 1221
P+ P L Y+ L+ L + + G
Sbjct: 1048 PLWTPDLSYYMNLIRRLADTI-------------------------------------SG 1070
Query: 1222 RKEFYQ-----NQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSN 1276
+ FY N+ P T + T V E+L LP++ S + +++ ++V+ + Q
Sbjct: 1071 KNVFYTTDWRFNEFPNAPTHALYVTCV-ELLGLPLAPSVVAGNIIDVIVSGYAVIPQKEI 1129
Query: 1277 GPYGASNSVGQG-SVLPTSPSGGSTDSLGASRSTPSV 1312
Y N+VG + LP G D L +TP++
Sbjct: 1130 HSY--INAVGIVLAALPEPYWSGIYDRLQDMLNTPNM 1164
>gi|194757114|ref|XP_001960810.1| GF13553 [Drosophila ananassae]
gi|190622108|gb|EDV37632.1| GF13553 [Drosophila ananassae]
Length = 1414
Score = 76.3 bits (186), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 142/677 (20%), Positives = 276/677 (40%), Gaps = 113/677 (16%)
Query: 682 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 738
GQV A+ A++ETY RL++ SL + L+Q P++ L ++E+ +YRL
Sbjct: 561 GQVPAA-ALLETYARLLVYTEIESL--GIKGFLSQLMPTVFKNQAWAMLHTLMEMFSYRL 617
Query: 739 LPL---YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 793
+ YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 618 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTALRLITSIGSAEFQPQFSRYFNDK 677
Query: 794 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 853
G ++ +E LNR+ ++ LA + G D + + L IM + H+W ++L
Sbjct: 678 SPGAVASNESEELNRVLILTLARSMHVHGGGDEMQS-WCKDFLSNIMQHTPHSWPMQSLA 736
Query: 854 YFPSLLRDALIGR----IDKRGL--TIQAWQQAETTVINQ---CTQLLSPSADPTYVKTY 904
FP L + +K+ L +++ + T++ N+ L P+ +P +
Sbjct: 737 CFPPALNEYFTQNNQPAENKQQLKKSVEEEYRTWTSMTNENDIIAHFLRPTTNPLF---- 792
Query: 905 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
LC I+ + ENI S ++L S +++++ D L+
Sbjct: 793 -----------LCLLFKIIWET--ENI-SPVAYKILEGISARALSTHLRKFCDYLV---- 834
Query: 965 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITL 1019
E+ +D + K I+ + ++ +D ++L L R + + L I + L
Sbjct: 835 AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLL 894
Query: 1020 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------P 1068
L EL+ RV+ +C + P +HW S K L H + E++ P
Sbjct: 895 LKASELRNRVQEFCKDNNP-DHWKQSNW-----QDKHLSFHQKYPEKFALDESASQIPLP 948
Query: 1069 TFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAY 1125
+F ++ R LPV+ ++V+R IE + +L S ++ +++ + L Y
Sbjct: 949 VYFSNVCLRFLPVLDVVVHRFIELTIPNVHQILGFILDHLSILYKFHDRPITYLYNTLHY 1008
Query: 1126 FYG------HLPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLLL 1176
+ L KL+ I + F + P SE + + + + + P L Y+ +L+
Sbjct: 1009 YERILRDRPSLKKKLVSAITSAFSEIRPPNWSVSEPYKVFLQNQDLLWTPELSYYMSLIR 1068
Query: 1177 GLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
L + + SG + S N+ P + P++
Sbjct: 1069 RLADTI---------SGKNVFYSTDWRFNEFP----NAPTH------------------- 1096
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSP 1295
L +E+L LPV+ + + ++++ ++V+ + Q +G N+VG + LP
Sbjct: 1097 -ALYVTCVELLGLPVAPALVANNIIDVIVSGYAVIPQKE--IHGYINAVGIVLAALPEPY 1153
Query: 1296 SGGSTDSLGASRSTPSV 1312
G D L +TP++
Sbjct: 1154 WSGIYDRLQDMLNTPNM 1170
>gi|124248376|gb|ABM92808.1| IP14638p [Drosophila melanogaster]
Length = 1442
Score = 76.3 bits (186), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 144/677 (21%), Positives = 274/677 (40%), Gaps = 113/677 (16%)
Query: 682 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 738
GQV A+ A++ETY RL++ SL + L+Q P++ L ++E+ +YRL
Sbjct: 561 GQVPAA-ALLETYARLLVYTEIESL--GIKGFLSQLMPTVFKNHAWAMLHTLMEMFSYRL 617
Query: 739 LPL---YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 793
+ YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 618 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTALRLITSIGSAEFQPQFSRYFNDK 677
Query: 794 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 853
G ++ +E LNR+ ++ LA + G D + + + L I+ + H+W +L
Sbjct: 678 SPGAVASNESEELNRVLILTLARSMHVHGGGD-EMQGWCKDFLSNIIQHTPHSWPMHSLA 736
Query: 854 YFPSLLRDALIGR----IDKRGL--TIQAWQQAETTVINQ---CTQLLSPSADPTYVKTY 904
FP L + +K+ L ++ + T++ N+ L P+ +P +
Sbjct: 737 CFPPALNEYFTQNNQPPENKQQLKKAVEEEYRTWTSMTNENDIIAHFLRPTTNPLF---- 792
Query: 905 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
LC I+ + ENI S ++L S +++++ D L+
Sbjct: 793 -----------LCLLFKIIWET--ENI-SPVAYKILEGISARALSTHLRKFCDYLV---- 834
Query: 965 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITL 1019
E+ +D + K I+ + ++ +D ++L L R + + L I + L
Sbjct: 835 AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLL 894
Query: 1020 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------P 1068
L EL+ RV+ +C + P +HW S K L H + E++ P
Sbjct: 895 LKASELRNRVQEFCKDNNP-DHWKQSNW-----QDKHLSFHQKYPEKFALDESASQIPLP 948
Query: 1069 TFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAY 1125
+F ++ R LPV+ ++V+R IE + +L S ++ +++ + L Y
Sbjct: 949 VYFSNVCLRFLPVLDVVVHRFIELTITNVHQILGFILDHLSILYKFHDRPITYLYNTLHY 1008
Query: 1126 FYG------HLPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLLL 1176
+ L KL+ I + F + P SE + ++ S + + P L Y+ +L+
Sbjct: 1009 YERILRDRPALKKKLVGAITSAFSEIRPPNWSVSEPYKVYLQSQDSLWTPELSYYMSLIR 1068
Query: 1177 GLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
L + + SG + S N+ P + P++
Sbjct: 1069 RLADTI---------SGKNVFYSTDWRFNEFP----NAPTH------------------- 1096
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSP 1295
L +E+L LPV+ + S+L+ ++V+ + Q Y N+VG + LP
Sbjct: 1097 -ALYVTCVELLGLPVAPPLVASNLIDVIVSGYAVIPQKDIHSY--INAVGIVLAALPEPY 1153
Query: 1296 SGGSTDSLGASRSTPSV 1312
G D L +TP++
Sbjct: 1154 WSGIYDRLQDMLNTPNM 1170
>gi|221330570|ref|NP_001137741.1| mediator complex subunit 23, isoform B [Drosophila melanogaster]
gi|220902353|gb|ACL83195.1| mediator complex subunit 23, isoform B [Drosophila melanogaster]
Length = 1441
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 144/677 (21%), Positives = 274/677 (40%), Gaps = 113/677 (16%)
Query: 682 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 738
GQV A+ A++ETY RL++ SL + L+Q P++ L ++E+ +YRL
Sbjct: 561 GQVPAA-ALLETYARLLVYTEIESL--GIKGFLSQLMPTVFKNHAWAMLHTLMEMFSYRL 617
Query: 739 LPL---YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 793
+ YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 618 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTALRLITSIGSAEFQPQFSRYFNDK 677
Query: 794 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 853
G ++ +E LNR+ ++ LA + G D + + + L I+ + H+W +L
Sbjct: 678 SPGAVASNESEELNRVLILTLARSMHVHGGGD-EMQGWCKDFLSNIIQHTPHSWPMHSLA 736
Query: 854 YFPSLLRDALIGR----IDKRGL--TIQAWQQAETTVINQ---CTQLLSPSADPTYVKTY 904
FP L + +K+ L ++ + T++ N+ L P+ +P +
Sbjct: 737 CFPPALNEYFTQNNQPPENKQQLKKAVEEEYRTWTSMTNENDIIAHFLRPTTNPLF---- 792
Query: 905 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
LC I+ + ENI S ++L S +++++ D L+
Sbjct: 793 -----------LCLLFKIIWET--ENI-SPVAYKILEGISARALSTHLRKFCDYLV---- 834
Query: 965 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITL 1019
E+ +D + K I+ + ++ +D ++L L R + + L I + L
Sbjct: 835 AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLL 894
Query: 1020 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------P 1068
L EL+ RV+ +C + P +HW S K L H + E++ P
Sbjct: 895 LKASELRNRVQEFCKDNNP-DHWKQSNW-----QDKHLSFHQKYPEKFALDESASQIPLP 948
Query: 1069 TFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAY 1125
+F ++ R LPV+ ++V+R IE + +L S ++ +++ + L Y
Sbjct: 949 VYFSNVCLRFLPVLDVVVHRFIELTITNVHQILGFILDHLSILYKFHDRPITYLYNTLHY 1008
Query: 1126 FYG------HLPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLLL 1176
+ L KL+ I + F + P SE + ++ S + + P L Y+ +L+
Sbjct: 1009 YERILRDRPALKKKLVGAITSAFSEIRPPNWSVSEPYKVYLQSQDSLWTPELSYYMSLIR 1068
Query: 1177 GLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
L + + SG + S N+ P + P++
Sbjct: 1069 RLADTI---------SGKNVFYSTDWRFNEFP----NAPTH------------------- 1096
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSP 1295
L +E+L LPV+ + S+L+ ++V+ + Q Y N+VG + LP
Sbjct: 1097 -ALYVTCVELLGLPVAPPLVASNLIDVIVSGYAVIPQKDIHSY--INAVGIVLAALPEPY 1153
Query: 1296 SGGSTDSLGASRSTPSV 1312
G D L +TP++
Sbjct: 1154 WSGIYDRLQDMLNTPNM 1170
>gi|19922780|ref|NP_611735.1| mediator complex subunit 23, isoform A [Drosophila melanogaster]
gi|74872254|sp|Q9W1X7.1|MED23_DROME RecName: Full=Mediator of RNA polymerase II transcription subunit 23;
AltName: Full=Mediator complex subunit 23; AltName:
Full=dSUR2; AltName: Full=dTRAP150
gi|7291500|gb|AAF46925.1| mediator complex subunit 23, isoform A [Drosophila melanogaster]
Length = 1439
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 144/677 (21%), Positives = 274/677 (40%), Gaps = 113/677 (16%)
Query: 682 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 738
GQV A+ A++ETY RL++ SL + L+Q P++ L ++E+ +YRL
Sbjct: 559 GQVPAA-ALLETYARLLVYTEIESL--GIKGFLSQLMPTVFKNHAWAMLHTLMEMFSYRL 615
Query: 739 LPL---YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 793
+ YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 616 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTALRLITSIGSAEFQPQFSRYFNDK 675
Query: 794 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 853
G ++ +E LNR+ ++ LA + G D + + + L I+ + H+W +L
Sbjct: 676 SPGAVASNESEELNRVLILTLARSMHVHGGGD-EMQGWCKDFLSNIIQHTPHSWPMHSLA 734
Query: 854 YFPSLLRDALIGR----IDKRGL--TIQAWQQAETTVINQ---CTQLLSPSADPTYVKTY 904
FP L + +K+ L ++ + T++ N+ L P+ +P +
Sbjct: 735 CFPPALNEYFTQNNQPPENKQQLKKAVEEEYRTWTSMTNENDIIAHFLRPTTNPLF---- 790
Query: 905 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
LC I+ + ENI S ++L S +++++ D L+
Sbjct: 791 -----------LCLLFKIIWET--ENI-SPVAYKILEGISARALSTHLRKFCDYLV---- 832
Query: 965 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITL 1019
E+ +D + K I+ + ++ +D ++L L R + + L I + L
Sbjct: 833 AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLL 892
Query: 1020 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------P 1068
L EL+ RV+ +C + P +HW S K L H + E++ P
Sbjct: 893 LKASELRNRVQEFCKDNNP-DHWKQSNW-----QDKHLSFHQKYPEKFALDESASQIPLP 946
Query: 1069 TFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAY 1125
+F ++ R LPV+ ++V+R IE + +L S ++ +++ + L Y
Sbjct: 947 VYFSNVCLRFLPVLDVVVHRFIELTITNVHQILGFILDHLSILYKFHDRPITYLYNTLHY 1006
Query: 1126 FYG------HLPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLLL 1176
+ L KL+ I + F + P SE + ++ S + + P L Y+ +L+
Sbjct: 1007 YERILRDRPALKKKLVGAITSAFSEIRPPNWSVSEPYKVYLQSQDSLWTPELSYYMSLIR 1066
Query: 1177 GLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
L + + SG + S N+ P + P++
Sbjct: 1067 RLADTI---------SGKNVFYSTDWRFNEFP----NAPTH------------------- 1094
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSP 1295
L +E+L LPV+ + S+L+ ++V+ + Q Y N+VG + LP
Sbjct: 1095 -ALYVTCVELLGLPVAPPLVASNLIDVIVSGYAVIPQKDIHSY--INAVGIVLAALPEPY 1151
Query: 1296 SGGSTDSLGASRSTPSV 1312
G D L +TP++
Sbjct: 1152 WSGIYDRLQDMLNTPNM 1168
>gi|195346903|ref|XP_002039994.1| GM15969 [Drosophila sechellia]
gi|194135343|gb|EDW56859.1| GM15969 [Drosophila sechellia]
Length = 1440
Score = 75.9 bits (185), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 144/677 (21%), Positives = 274/677 (40%), Gaps = 113/677 (16%)
Query: 682 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 738
GQV A+ A++ETY RL++ SL + L+Q P++ L ++E+ +YRL
Sbjct: 559 GQVPAA-ALLETYARLLVYTEIESL--GIKGFLSQLMPTVFKNHAWAMLHTLMEMFSYRL 615
Query: 739 LPL---YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 793
+ YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 616 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTALRLITSIGSAEFQPQFSRYFNDK 675
Query: 794 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 853
G ++ +E LNR+ ++ LA + G D + + + L I+ + H+W +L
Sbjct: 676 SPGAVASNESEELNRVLILTLARSMHVHGGGD-EMQGWCKDFLSNIIQHTPHSWPMHSLA 734
Query: 854 YFPSLLRDALIGR----IDKRGL--TIQAWQQAETTVINQ---CTQLLSPSADPTYVKTY 904
FP L + +K+ L ++ + T++ N+ L P+ +P +
Sbjct: 735 CFPPALNEYFTQNNQPPENKQQLKKAVEEEYRTWTSMTNENDIIAHFLRPTTNPLF---- 790
Query: 905 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
LC I+ + ENI S ++L S +++++ D L+
Sbjct: 791 -----------LCLLFKIIWET--ENI-SPVAYKILEGISARALSTHLRKFCDYLV---- 832
Query: 965 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITL 1019
E+ +D + K I+ + ++ +D ++L L R + + L I + L
Sbjct: 833 AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLL 892
Query: 1020 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------P 1068
L EL+ RV+ +C + P +HW S K L H + E++ P
Sbjct: 893 LKASELRNRVQEFCKDNNP-DHWKQSNW-----QDKHLSFHQKYPEKFALDESASQIPLP 946
Query: 1069 TFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAY 1125
+F ++ R LPV+ ++V+R IE + +L S ++ +++ + L Y
Sbjct: 947 VYFSNVCLRFLPVLDVVVHRFIELTITNVHQILGFILDHLSILYKFHDRPITYLYNTLHY 1006
Query: 1126 FYG------HLPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLLL 1176
+ L KL+ I + F + P SE + ++ S + + P L Y+ +L+
Sbjct: 1007 YERILRDRPALKKKLVGAITSAFSEIRPPNWSVSEPYKVYLQSQDSLWTPELSYYMSLIR 1066
Query: 1177 GLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
L + + SG + S N+ P + P++
Sbjct: 1067 RLADTI---------SGKNVFYSTDWRFNEFP----NAPTH------------------- 1094
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSP 1295
L +E+L LPV+ + S+L+ ++V+ + Q Y N+VG + LP
Sbjct: 1095 -ALYVTCVELLGLPVAPPLVASNLIDVIVSGYAVIPQKDIHSY--INAVGIVLAALPEPY 1151
Query: 1296 SGGSTDSLGASRSTPSV 1312
G D L +TP++
Sbjct: 1152 WSGIYDRLQDMLNTPNM 1168
>gi|195585861|ref|XP_002082697.1| GD11721 [Drosophila simulans]
gi|194194706|gb|EDX08282.1| GD11721 [Drosophila simulans]
Length = 1444
Score = 75.5 bits (184), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 144/677 (21%), Positives = 274/677 (40%), Gaps = 113/677 (16%)
Query: 682 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 738
GQV A+ A++ETY RL++ SL + L+Q P++ L ++E+ +YRL
Sbjct: 559 GQVPAA-ALLETYARLLVYTEIESL--GIKGFLSQLMPTVFKNHAWAMLHTLMEMFSYRL 615
Query: 739 LPL---YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 793
+ YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 616 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTALRLITSIGSAEFQPQFSRYFNDK 675
Query: 794 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 853
G ++ +E LNR+ ++ LA + G D + + + L I+ + H+W +L
Sbjct: 676 SPGAVASNESEELNRVLILTLARSMHVHGGGD-EMQGWCKDFLSNIIQHTPHSWPMHSLA 734
Query: 854 YFPSLLRDALIGR----IDKRGL--TIQAWQQAETTVINQ---CTQLLSPSADPTYVKTY 904
FP L + +K+ L ++ + T++ N+ L P+ +P +
Sbjct: 735 CFPPALNEYFTQNNQPPENKQQLKKAVEEEYRTWTSMTNENDIIAHFLRPTTNPLF---- 790
Query: 905 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
LC I+ + ENI S ++L S +++++ D L+
Sbjct: 791 -----------LCLLFKIIWET--ENI-SPVAYKILEGISARALSTHLRKFCDYLV---- 832
Query: 965 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITL 1019
E+ +D + K I+ + ++ +D ++L L R + + L I + L
Sbjct: 833 AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLL 892
Query: 1020 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------P 1068
L EL+ RV+ +C + P +HW S K L H + E++ P
Sbjct: 893 LKASELRNRVQEFCKDNNP-DHWKQSNW-----QDKHLSFHQKYPEKFALDESASQIPLP 946
Query: 1069 TFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAY 1125
+F ++ R LPV+ ++V+R IE + +L S ++ +++ + L Y
Sbjct: 947 VYFSNVCLRFLPVLDVVVHRFIELTITNVHQILGFILDHLSILYKFHDRPITYLYNTLHY 1006
Query: 1126 FYG------HLPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLLL 1176
+ L KL+ I + F + P SE + ++ S + + P L Y+ +L+
Sbjct: 1007 YERILRDRPALKKKLVGAITSAFSEIRPPNWSVSEPYKVYLQSQDSLWTPELSYYMSLIR 1066
Query: 1177 GLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
L + + SG + S N+ P + P++
Sbjct: 1067 RLADTI---------SGKNVFYSTDWRFNEFP----NAPTH------------------- 1094
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSP 1295
L +E+L LPV+ + S+L+ ++V+ + Q Y N+VG + LP
Sbjct: 1095 -ALYVTCVELLGLPVAPPLVASNLIDVIVSGYAVIPQKDIHSY--INAVGIVLAALPEPY 1151
Query: 1296 SGGSTDSLGASRSTPSV 1312
G D L +TP++
Sbjct: 1152 WSGIYDRLQDMLNTPNM 1168
>gi|195426385|ref|XP_002061315.1| GK20791 [Drosophila willistoni]
gi|194157400|gb|EDW72301.1| GK20791 [Drosophila willistoni]
Length = 1413
Score = 75.1 bits (183), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 146/701 (20%), Positives = 280/701 (39%), Gaps = 112/701 (15%)
Query: 658 SLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQR 716
SL ++L QM V + A++ETY RL++ SL + L+Q
Sbjct: 536 SLTVHSKMSLIHSFVTQMLKQAQNKSQVPAAALLETYARLLVYTEIESL--GIKGFLSQL 593
Query: 717 NPSLLAKVGVTPL--VLEIVNYRLLPL---YRYQGKTKTLMYDITKIISALKVKRG-DHR 770
P++ L ++E+ +YRL + YR Q + + +++ +
Sbjct: 594 MPTVFKNHAWAMLHTLMEMFSYRLHHVPTHYRVQLLSLLHSLSSLPQTNKMQLNLCFEST 653
Query: 771 VLRLAENLCMNLILSQ-RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHV 829
LRL ++ Q +F+ K G ++ +E LNR+ ++ LA + G D
Sbjct: 654 ALRLITSISSAEFQPQFSRYFNEKSPGAVASNESEELNRVLILTLARSMHVHGGGDELQG 713
Query: 830 LYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGR----IDKRGL--TIQAWQQAETT 883
+ + L IM + H+W ++L FP L + +K+ L +++ + T+
Sbjct: 714 -WCKDFLSNIMQHTPHSWPLQSLTCFPPALNEYFAQNNQPSENKQVLKKSVEEEYRMWTS 772
Query: 884 VINQ---CTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVL 940
+ N+ L P+A+P + LC I+ + ENI S ++L
Sbjct: 773 MSNENDIIAHFLRPNANPLF---------------LCLLFKIIWET--ENI-SPVAYKIL 814
Query: 941 REFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILL 1000
+ S +++ + D L+ VE+ +D + K I+ + ++ +D ++
Sbjct: 815 EQISARALSTLLRKFCDYLV----VEVASFSDGRDFIHKCVDTINNMIWKFNVVTIDRVV 870
Query: 1001 LALIDRDDDPHA-----LRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQK 1055
L L R + + L I + LL EL+ RV+ +C + P +HW S K
Sbjct: 871 LCLALRTHEGNEAQVCFLIIQLLLLKASELRNRVQEFCKDNNP-DHWKQSNW-----QDK 924
Query: 1056 ALGNHLSWKERY-----------PTFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRV 1101
L H + E++ P +F ++ R LPV+ ++V+R IE + +
Sbjct: 925 HLSFHQKYPEKFALDESASQIPLPVYFSNVCLRFLPVLDVVVHRFIELTIPNVHQILGYI 984
Query: 1102 LATYSSFLAYYPLRFSFVRDILAYFYG------HLPGKLIVRILNVFDLSKIP---FSES 1152
L S ++ +++ + L Y+ L KL+ I + F + P +E
Sbjct: 985 LDHLSILYKFHDRPITYLYNTLHYYERILRDRPSLKKKLVSTITSAFSEIRPPNWSITEP 1044
Query: 1153 FPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQ 1212
+ + + + + P L Y+ L+ L + + SG + + N+ P
Sbjct: 1045 YKVFLQNQDLLWTPELGYYMNLIRRLADTI---------SGKNVFYTTDWRFNEFP---- 1091
Query: 1213 SGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLI 1272
+ P++ L +E+L LPV+ S + ++++ ++VN +
Sbjct: 1092 NAPAH--------------------ALYVTCVELLGLPVAPSLVANNIIDVIVNGYAVIP 1131
Query: 1273 QTSNGPYGASNSVGQG-SVLPTSPSGGSTDSLGASRSTPSV 1312
Q Y N+VG + LP G D L +TP++
Sbjct: 1132 QKEIHSY--INAVGIVLAALPEPYWSGIYDRLQDMLNTPNM 1170
>gi|195488939|ref|XP_002092526.1| GE14246 [Drosophila yakuba]
gi|194178627|gb|EDW92238.1| GE14246 [Drosophila yakuba]
Length = 1451
Score = 74.3 bits (181), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 145/678 (21%), Positives = 276/678 (40%), Gaps = 115/678 (16%)
Query: 682 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 738
GQV A+ A++ETY RL++ SL + L+Q P++ L ++E+ +YRL
Sbjct: 559 GQVPAA-ALLETYARLLVYTEIESL--GIKGFLSQLMPTVFKHHAWAMLHTLMEMFSYRL 615
Query: 739 LPL---YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 793
+ YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 616 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTALRLITSIGSAEFQPQFSRYFNDK 675
Query: 794 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 853
G ++ +E LNR+ ++ LA + G D + + + L I+ + H+W +L
Sbjct: 676 SPGAVASNESEELNRVLILTLARSMHVHGGGD-EMQGWCKDFLSNIIQHTPHSWPMHSLA 734
Query: 854 YFPSLLRDALIGR----IDKRGL--TIQAWQQAETTVINQ---CTQLLSPSADPTYVKTY 904
FP L + +K+ L ++ + T++ N+ L P+ +P +
Sbjct: 735 CFPPALNEYFTQNNQPTENKQQLKKAVEEEYRTWTSMTNENDIIAHFLRPTTNPLF---- 790
Query: 905 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
LC I+ + ENI S ++L S +++++ D L+
Sbjct: 791 -----------LCLLFKIIWET--ENI-SPVAYKILEGISARALSTHLRKFCDYLV---- 832
Query: 965 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITL 1019
E+ +D + K I+ + ++ +D ++L L R + + L I + L
Sbjct: 833 AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLL 892
Query: 1020 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQ-KALGNHLSWKERY----------- 1067
L EL+ RV+ +C + P +HW K+ Q K L H + E++
Sbjct: 893 LKASELRNRVQEFCKDNNP-DHW------KQNNWQDKHLSFHQKYPEKFALDESASQIPL 945
Query: 1068 PTFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILA 1124
P +F ++ R LPV+ ++V+R IE + +L S ++ +++ + L
Sbjct: 946 PVYFSNVCLRFLPVLDVVVHRFIELTITNVHQILGFILDHLSILYKFHDRPITYLYNTLH 1005
Query: 1125 YFYG------HLPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLL 1175
Y+ L KL+ I + F + P SE + ++ S + + P L Y+ +L+
Sbjct: 1006 YYERILRDRPALKKKLVGAITSAFSEIRPPNWSVSEPYKVYLQSQDSLWTPELSYYMSLI 1065
Query: 1176 LGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYT 1235
L + + SG + S N+ P + P++
Sbjct: 1066 RRLADTI---------SGKNVFYSTDWRFNEFP----NAPTH------------------ 1094
Query: 1236 QLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTS 1294
L +E+L LPV+ + S+L+ ++V+ + Q Y N+VG + LP
Sbjct: 1095 --ALYVTCVELLGLPVAPPLVASNLIDVIVSGYAVIPQKDIHSY--INAVGIVLAALPEP 1150
Query: 1295 PSGGSTDSLGASRSTPSV 1312
G D L +TP++
Sbjct: 1151 YWSGIYDRLQDMLNTPNM 1168
>gi|432946135|ref|XP_004083785.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like isoform 2 [Oryzias latipes]
Length = 1395
Score = 73.2 bits (178), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 240/1182 (20%), Positives = 448/1182 (37%), Gaps = 228/1182 (19%)
Query: 429 MISEAVIDRIVELLKLTNSEVNCWHD--------WLIFSDVFFFLVKSGCIDFVDFVDKL 480
++ E ++D +V ++ + +E + D W S F V F V L
Sbjct: 305 VLEEQLVDLVVYAMERSETEEHFDADVGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSL 364
Query: 481 VSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCT--- 537
+L G I +H+ W+L Q I + AL +D V +L + E C
Sbjct: 365 HQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL-ADFLPVMKLFDLL--YPEKECIPVP 420
Query: 538 DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ----KGKQIDEWWRQVSKGDRM 593
D N PQS F +C IW ++ + + +N +LQ ++ + Q S ++
Sbjct: 421 DINKPQSTH-SFAMTC----IW-IHLNRKAQSDNSKLQIPIPHSLKLHHEFLQQSLRNKT 474
Query: 594 MDYMNMDDRSVGMFWVVSYTMAQ----PACETVMNWLSSAGVTELFPGSNLPPNERLMVM 649
+ M D + + T ++ P V +A V PG+N M
Sbjct: 475 L---GMSDYKIALLCNAYSTNSECFTLPMGVLVETIYGNASVRTSLPGTNC------MAS 525
Query: 650 REVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLML-LAPH 703
V PLPM+LL +++ + L + + + + A+VETY+RL++ +
Sbjct: 526 GSVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYMEIE 585
Query: 704 SLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKI 758
SL + ++Q P++ G+ +LE+ +YR+ P YR Q ++ +
Sbjct: 586 SL--GIKGFISQLLPNVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQL--------LSHL 635
Query: 759 ISALKVKRGDHRVLRLA-ENLCMNLILS------QRDFFSLKREGKG--STEFTETLNRI 809
S V + + L L E+ + LI + Q F + K S E +E LNR
Sbjct: 636 HSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLNDPKTVLSAE-SEELNRA 694
Query: 810 TVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGR 866
++ LA +D+ H + + +L IM+ + H W+ TL FP+ L+
Sbjct: 695 LILTLARATHVTDFFTGSDSIHGTWCKDILHTIMSFTPHNWASHTLSCFPAPLQ----AF 750
Query: 867 IDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQG 926
+ + ++ + V + + S + + + + P +LC +L++
Sbjct: 751 FKQNNVPQESRFNLKKNVEEEYRKWKSMAIENDIITHFSMQGSPP--LFLCLLWKMLLET 808
Query: 927 HPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANI-S 985
++IN RVL + +++ T D L++ E Q L C I +
Sbjct: 809 --DHINQIG-FRVLERIGARALVAHVRTFADFLVY----EFSTSAGGQQL--NKCIEILN 859
Query: 986 FFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPE 1040
V + ++ LD L+L L R + + ++ + LL + + RV + + PE
Sbjct: 860 DMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDF-VKENSPE 918
Query: 1041 HWLYSGLF-KRVELQKALGNHLSWK--------------ERYPTFFDDIAARLLPVIPLI 1085
HWL S K + K L ++ + P +F ++ R LPV ++
Sbjct: 919 HWLQSDWHSKHMNYHKKYPEKLYFEGLADQVNPPIQQQPQYLPIYFGNVCLRFLPVFDIV 978
Query: 1086 VYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRI 1138
++R +E S + +L ++ +++ + L Y+ H L KL+ I
Sbjct: 979 IHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYERHLRDRTNLKRKLVHAI 1038
Query: 1139 LNVFDLSKIP---FSESFPQ--HISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSG 1193
++ ++ P SE++ + + + V P Y+ L+ LV+ +
Sbjct: 1039 MSSLKDNRTPGWGLSETYMKCGMNAREDNVWIPDDTYYCKLIGRLVDTMA---------- 1088
Query: 1194 STMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSA 1253
K+P GP + R F + +P + L +E+++L V
Sbjct: 1089 -----------GKTP-----GPFPNCDWR--FNEFPNPAAHA---LHVTCVELMALAVPG 1127
Query: 1254 SQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSPSGGSTDSLGASRSTPSV 1312
+ ++L+ +V+ QP + + S + N++G + LP D + V
Sbjct: 1128 KDVGNALLNVVLKSQPLVPRESITAW--MNAIGLVITALPEPYWVVLHDRI--------V 1177
Query: 1313 SGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGK 1372
S I++ + S + + + L AC
Sbjct: 1178 SVISSPALTSETDWVGYPFALLDFTAC--------------------------------H 1205
Query: 1373 RSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRP 1432
+S E++ + AL W ++IG + +L F S + L+P
Sbjct: 1206 QSYSEMNCSYVLALAHAVWH-----HSSIGQL-SLTPKFLSEV--------------LKP 1245
Query: 1433 ITSVAM-LRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIA 1491
I L V+ ++GP L R T + + M +N S +
Sbjct: 1246 IVQTEFQLLYVYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDQNC-----QHLSYMD 1300
Query: 1492 DLIDFLHHVVH-YEGQGGPVQASSKPRPEVLVLTGRAAESLR 1532
+ DFL+H+ + Y G S K + E +++T R A LR
Sbjct: 1301 PICDFLYHIKYMYTGD------SVKEQVEKIIMTLRPAMKLR 1336
>gi|432946133|ref|XP_004083784.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like isoform 1 [Oryzias latipes]
Length = 1389
Score = 72.8 bits (177), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 240/1182 (20%), Positives = 448/1182 (37%), Gaps = 228/1182 (19%)
Query: 429 MISEAVIDRIVELLKLTNSEVNCWHD--------WLIFSDVFFFLVKSGCIDFVDFVDKL 480
++ E ++D +V ++ + +E + D W S F V F V L
Sbjct: 299 VLEEQLVDLVVYAMERSETEEHFDADVGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSL 358
Query: 481 VSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCT--- 537
+L G I +H+ W+L Q I + AL +D V +L + E C
Sbjct: 359 HQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL-ADFLPVMKLFDLL--YPEKECIPVP 414
Query: 538 DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ----KGKQIDEWWRQVSKGDRM 593
D N PQS F +C IW ++ + + +N +LQ ++ + Q S ++
Sbjct: 415 DINKPQSTH-SFAMTC----IW-IHLNRKAQSDNSKLQIPIPHSLKLHHEFLQQSLRNKT 468
Query: 594 MDYMNMDDRSVGMFWVVSYTMAQ----PACETVMNWLSSAGVTELFPGSNLPPNERLMVM 649
+ M D + + T ++ P V +A V PG+N M
Sbjct: 469 L---GMSDYKIALLCNAYSTNSECFTLPMGVLVETIYGNASVRTSLPGTNC------MAS 519
Query: 650 REVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLML-LAPH 703
V PLPM+LL +++ + L + + + + A+VETY+RL++ +
Sbjct: 520 GSVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYMEIE 579
Query: 704 SLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKI 758
SL + ++Q P++ G+ +LE+ +YR+ P YR Q ++ +
Sbjct: 580 SL--GIKGFISQLLPNVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQL--------LSHL 629
Query: 759 ISALKVKRGDHRVLRLA-ENLCMNLILS------QRDFFSLKREGKG--STEFTETLNRI 809
S V + + L L E+ + LI + Q F + K S E +E LNR
Sbjct: 630 HSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLNDPKTVLSAE-SEELNRA 688
Query: 810 TVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGR 866
++ LA +D+ H + + +L IM+ + H W+ TL FP+ L+
Sbjct: 689 LILTLARATHVTDFFTGSDSIHGTWCKDILHTIMSFTPHNWASHTLSCFPAPLQ----AF 744
Query: 867 IDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQG 926
+ + ++ + V + + S + + + + P +LC +L++
Sbjct: 745 FKQNNVPQESRFNLKKNVEEEYRKWKSMAIENDIITHFSMQGSPP--LFLCLLWKMLLET 802
Query: 927 HPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANI-S 985
++IN RVL + +++ T D L++ E Q L C I +
Sbjct: 803 --DHINQIG-FRVLERIGARALVAHVRTFADFLVY----EFSTSAGGQQL--NKCIEILN 853
Query: 986 FFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPE 1040
V + ++ LD L+L L R + + ++ + LL + + RV + + PE
Sbjct: 854 DMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDF-VKENSPE 912
Query: 1041 HWLYSGLF-KRVELQKALGNHLSWK--------------ERYPTFFDDIAARLLPVIPLI 1085
HWL S K + K L ++ + P +F ++ R LPV ++
Sbjct: 913 HWLQSDWHSKHMNYHKKYPEKLYFEGLADQVNPPIQQQPQYLPIYFGNVCLRFLPVFDIV 972
Query: 1086 VYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRI 1138
++R +E S + +L ++ +++ + L Y+ H L KL+ I
Sbjct: 973 IHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYERHLRDRTNLKRKLVHAI 1032
Query: 1139 LNVFDLSKIP---FSESFPQ--HISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSG 1193
++ ++ P SE++ + + + V P Y+ L+ LV+ +
Sbjct: 1033 MSSLKDNRTPGWGLSETYMKCGMNAREDNVWIPDDTYYCKLIGRLVDTMA---------- 1082
Query: 1194 STMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSA 1253
K+P GP + R F + +P + L +E+++L V
Sbjct: 1083 -----------GKTP-----GPFPNCDWR--FNEFPNPAAHA---LHVTCVELMALAVPG 1121
Query: 1254 SQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSPSGGSTDSLGASRSTPSV 1312
+ ++L+ +V+ QP + + S + N++G + LP D + V
Sbjct: 1122 KDVGNALLNVVLKSQPLVPRESITAW--MNAIGLVITALPEPYWVVLHDRI--------V 1171
Query: 1313 SGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADGK 1372
S I++ + S + + + L AC
Sbjct: 1172 SVISSPALTSETDWVGYPFALLDFTAC--------------------------------H 1199
Query: 1373 RSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLRP 1432
+S E++ + AL W ++IG + +L F S + L+P
Sbjct: 1200 QSYSEMNCSYVLALAHAVWH-----HSSIGQL-SLTPKFLSEV--------------LKP 1239
Query: 1433 ITSVAM-LRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEIA 1491
I L V+ ++GP L R T + + M +N S +
Sbjct: 1240 IVQTEFQLLYVYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDQNC-----QHLSYMD 1294
Query: 1492 DLIDFLHHVVH-YEGQGGPVQASSKPRPEVLVLTGRAAESLR 1532
+ DFL+H+ + Y G S K + E +++T R A LR
Sbjct: 1295 PICDFLYHIKYMYTGD------SVKEQVEKIIMTLRPAMKLR 1330
>gi|449670996|ref|XP_002168234.2| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Hydra magnipapillata]
Length = 1318
Score = 72.4 bits (176), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 139/670 (20%), Positives = 266/670 (39%), Gaps = 147/670 (21%)
Query: 683 QVVA-SIAMVETYTRLMLLAPHSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRLL 739
QV+A S A+VETY+RL++ L + S ++Q P+++ + + L +LE+ +YRL
Sbjct: 528 QVLALSPALVETYSRLLVYMEIELL-GIKSFISQVLPNVIKRKAWSILHGLLEMFSYRL- 585
Query: 740 PLYRYQGKTK-TLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSLKREGKG 798
+ Q + +L+ + ++ + + ++ + L + + D + +
Sbjct: 586 --HHIQSHYRMSLISSLHNVVPVSDLDKVQIQICVVTTVLKLIMGFGSSDLQAQLSSQRY 643
Query: 799 STEFT-------ETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKT 851
+TE + E LN++ ++ +A I G AD+ + ++++++ + + H WS T
Sbjct: 644 TTEPSVILSKDCEELNKVLILTMARAIHVTG-ADSLPFTWCESIVKESLKLTPHRWSSYT 702
Query: 852 LRYFP----------SLLRDA----LIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSAD 897
L FP S++ D L+ ++K ++ + ET
Sbjct: 703 LASFPVPLQLICSQESVVEDVNGKVLMSVVEKHHRKLKTLNEEETV-------------- 748
Query: 898 PTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVL--REFSPEEVTSNIYTM 955
+Y + Q +LC +L++ + +L L + S + + +
Sbjct: 749 -----SYFNEK-EQAEIFLCIVWKVLLEHNRITPVCHQILTNLSNKSHSSKPLANGCKFF 802
Query: 956 VDVLLHHIHVEL----------QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALID 1005
D L+ + + +R L D+++K +E++PLD L+L+L
Sbjct: 803 ADYLVFDFKLYVNNPQNAAQVSKRFQYLNDIIWK-----------YEIIPLDRLILSLTL 851
Query: 1006 RDDDPHALRIVIT-----LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVEL-QKALGN 1059
R D +I LL EL+ RVK + + P+HW +V+ ++
Sbjct: 852 RPHDEKNSQICFYIIKWLLLQPAELRLRVKKFA-SENTPQHW------TQVDWNERHTAY 904
Query: 1060 HLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIENDAMDSADR 1100
H + ERY PT+F +I R LPV ++++RLIE ++ D
Sbjct: 905 HDQYPERYHYEGILEANNITLPNLQYLPTYFGNICLRFLPVFEILIHRLIEVSQWNTLDH 964
Query: 1101 VLATYSSFLAYYPLRFSFVRDILAYFYGHLPGKLIVR---ILNVF----DLSKIPFSESF 1153
+L YS + +++ + L Y+ L I++ +L++ +L FS
Sbjct: 965 ILKEYSPLFKFLEQPITYLYNTLHYYEKKLKENAIIKRKLMLSICTSSGNLLDGIFSTEI 1024
Query: 1154 PQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQS 1213
+ I+ + P +DYF L I A +N S R
Sbjct: 1025 IEFINKESDTWVPNIDYFVELF----QRFITATFFNKSRSSYPSFDWRF----------- 1069
Query: 1214 GPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQ 1273
EF + T L L +E++ LP+SA + ++V +V T+
Sbjct: 1070 ---------NEFLNS------TTLALYATCLELMILPISAEDVGHAIVDLV-----TMCH 1109
Query: 1274 TSNGPYGASN 1283
SN SN
Sbjct: 1110 GSNQTLIKSN 1119
>gi|194884710|ref|XP_001976317.1| GG22812 [Drosophila erecta]
gi|190659504|gb|EDV56717.1| GG22812 [Drosophila erecta]
Length = 1428
Score = 72.0 bits (175), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 143/681 (20%), Positives = 273/681 (40%), Gaps = 113/681 (16%)
Query: 682 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 738
GQV A+ A++ETY RL++ SL + L+Q P++ L ++E+ +YRL
Sbjct: 559 GQVPAA-ALLETYARLLVYTEIESL--GIKGFLSQLMPTVFKNHAWAMLHTLMEMFSYRL 615
Query: 739 LPL---YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 793
+ YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 616 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTALRLITSIGSAEFQPQFSRYFNDK 675
Query: 794 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 853
G ++ +E LNR+ ++ LA + G D + + + L I+ + H+W +L
Sbjct: 676 SPGAVASNESEELNRVLILTLARSMHVHGGGD-EMQGWCKDFLSNIIQHTPHSWPMHSLA 734
Query: 854 YFPSLLRDALIGR----IDKRGL--TIQAWQQAETTVINQ---CTQLLSPSADPTYVKTY 904
FP L + +K+ L ++ + T++ N+ L P+ +P +
Sbjct: 735 CFPPALNEYFTQNNQPPENKQQLKKAVEEEYRTWTSMTNENDIIAHFLRPTTNPLF---- 790
Query: 905 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
LC I+ + ENI S ++L S +++++ D L+
Sbjct: 791 -----------LCLLFKIIWET--ENI-SPVAYKILEGISARALSTHLRKFCDYLV---- 832
Query: 965 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITL 1019
E+ +D + K I+ + ++ +D ++L L R + + L I + L
Sbjct: 833 AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLL 892
Query: 1020 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------P 1068
L EL+ RV+ +C + P +HW S K L H + E++ P
Sbjct: 893 LKASELRNRVQEFCKDNNP-DHWKQSNW-----QDKHLSFHQKYPEKFALDESASQIPLP 946
Query: 1069 TFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAY 1125
+F ++ R LPV+ ++V+R IE + +L S ++ +++ + L Y
Sbjct: 947 VYFSNVCLRFLPVLDVVVHRFIELTITNVHQILGFILDHLSILYKFHDRPITYLYNTLHY 1006
Query: 1126 FYG------HLPGKLIVRILNVFDL---SKIPFSESFPQHISSSNPVMCPPLDYFATLLL 1176
+ L KL+ I + F + SE + ++ + + P L Y+ +L+
Sbjct: 1007 YERILRDRPALKKKLVGAITSAFSEIRPANWSVSEPYKVYLQGQDSLWTPELSYYMSLIR 1066
Query: 1177 GLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
L + + SG + S N+ P + P++
Sbjct: 1067 RLADTI---------SGKNVFYSTDWRFNEFP----NAPTH------------------- 1094
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSP 1295
L +E+L LPV+ + S+L+ ++V+ + Q Y N+VG + LP
Sbjct: 1095 -ALYVTCVELLGLPVAPPLVASNLIDVIVSGYAVIPQKDIHSY--INAVGIVLAALPEPY 1151
Query: 1296 SGGSTDSLGASRSTPSVSGIN 1316
G D L +TP++ N
Sbjct: 1152 WSGIYDRLQDMLNTPNMLNWN 1172
>gi|198461045|ref|XP_001361895.2| GA17618 [Drosophila pseudoobscura pseudoobscura]
gi|198137215|gb|EAL26474.2| GA17618 [Drosophila pseudoobscura pseudoobscura]
Length = 1471
Score = 71.2 bits (173), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 142/668 (21%), Positives = 272/668 (40%), Gaps = 95/668 (14%)
Query: 682 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 738
GQV A+ A++ETY RL++ SL F L+Q P++ L ++E+ +YRL
Sbjct: 559 GQVPAA-ALLETYARLLVYTEIESLGVKGF--LSQLMPTVFKNHAWAMLHTLMEMFSYRL 615
Query: 739 LPL---YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 793
+ YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 616 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTGLRLITSIGSAEFQPQFSRYFNDK 675
Query: 794 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 853
G ++ +E LNR+ ++ LA + G D + + L IM + H+WS ++L
Sbjct: 676 SPGAVASNESEELNRVLILTLARSMHVHGGGDEMQS-WCKDFLANIMQHTPHSWSLQSLA 734
Query: 854 YFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHR 913
FP L + + + QQ + +V + S +++ + +L + +
Sbjct: 735 CFPPALNEYF----TQNAQPPENKQQLKKSVEEEYRTWTSMTSENDIIAHFLRPT--TNP 788
Query: 914 QYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSL 973
+LC I+ + E+I S ++L S +T+++ D L+ E+
Sbjct: 789 LFLCLLFKIIWET--ESI-SPVAYKILEGISARALTTHLRKFCDYLV----AEVASSSDG 841
Query: 974 QDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITLLDRQELQQR 1028
+D + K I+ + ++ +D ++L L R + + L I + LL EL+ R
Sbjct: 842 RDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLLLKASELRNR 901
Query: 1029 VKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------PTFFDDIAAR 1077
V+ +C + P +HW S K L H + E++ P +F ++ R
Sbjct: 902 VQEFCKDNNP-DHWKQSNW-----QDKHLSFHQKYPEKFALDESASHLALPVYFSNVCLR 955
Query: 1078 LLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYG------ 1128
LPV+ ++V+R IE + +L S ++ +++ + L Y+
Sbjct: 956 FLPVLDVVVHRFIELTIPNVHQILGFILDHLSILYKFHDRPITYLYNTLHYYERILRERP 1015
Query: 1129 HLPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPA 1185
L KL+ I F + P SE + + + + + P L Y+ L+ L +
Sbjct: 1016 PLKKKLVSTITGAFSDIRPPNWSVSEPYKVFLQNQDLLWNPELSYYMNLIKRLSETI--- 1072
Query: 1186 LNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIE 1245
SG + + N+ P + P++ L +E
Sbjct: 1073 ------SGKNVFYTTDWRFNEFP----NAPAH--------------------ALYVTCVE 1102
Query: 1246 ILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVG-QGSVLPTSPSGGSTDSLG 1304
+L LPV+ + + ++L+ ++V+ + Q Y N+VG + LP G D L
Sbjct: 1103 LLGLPVAPALVANNLIDVIVSGYAVIPQKEIHSY--INAVGIVMAALPEPYWTGIYDRLK 1160
Query: 1305 ASRSTPSV 1312
+TP++
Sbjct: 1161 EMLNTPNM 1168
>gi|195170266|ref|XP_002025934.1| GL10134 [Drosophila persimilis]
gi|194110798|gb|EDW32841.1| GL10134 [Drosophila persimilis]
Length = 1469
Score = 71.2 bits (173), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 142/668 (21%), Positives = 272/668 (40%), Gaps = 95/668 (14%)
Query: 682 GQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL 738
GQV A+ A++ETY RL++ SL F L+Q P++ L ++E+ +YRL
Sbjct: 559 GQVPAA-ALLETYARLLVYTEIESLGVKGF--LSQLMPTVFKNHAWAMLHTLMEMFSYRL 615
Query: 739 LPL---YRYQGKTKTLMYDITKIISALKVKRG-DHRVLRLAENLCMNLILSQ-RDFFSLK 793
+ YR Q + + +++ + LRL ++ Q +F+ K
Sbjct: 616 HHVPTHYRVQLLSLLHSLSSVPQTNKMQLNLCFESTGLRLITSIGSAEFQPQFSRYFNDK 675
Query: 794 REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLR 853
G ++ +E LNR+ ++ LA + G D + + L IM + H+WS ++L
Sbjct: 676 SPGAVASNESEELNRVLILTLARSMHVHGGGDEMQS-WCKDFLANIMQHTPHSWSLQSLA 734
Query: 854 YFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHR 913
FP L + + + QQ + +V + S +++ + +L + +
Sbjct: 735 CFPPALNEYF----TQNAQPPENKQQLKKSVEEEYRTWTSMTSENDIIAHFLRPT--TNP 788
Query: 914 QYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSL 973
+LC I+ + E+I S ++L S +T+++ D L+ E+
Sbjct: 789 LFLCLLFKIIWET--ESI-SPVAYKILEGISARALTTHLRKFCDYLV----AEVASSSDG 841
Query: 974 QDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA-----LRIVITLLDRQELQQR 1028
+D + K I+ + ++ +D ++L L R + + L I + LL EL+ R
Sbjct: 842 RDFIHKCVDTINNMIWKFNVVTIDRVVLCLALRTHEGNEAQVCFLIIQLLLLKASELRNR 901
Query: 1029 VKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------PTFFDDIAAR 1077
V+ +C + P +HW S K L H + E++ P +F ++ R
Sbjct: 902 VQEFCKDNNP-DHWKQSNW-----QDKHLSFHQKYPEKFALDESASHLALPVYFSNVCLR 955
Query: 1078 LLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYG------ 1128
LPV+ ++V+R IE + +L S ++ +++ + L Y+
Sbjct: 956 FLPVLDVVVHRFIELTIPNVHQILGFILDHLSILYKFHDRPITYLYNTLHYYERILRERP 1015
Query: 1129 HLPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPA 1185
L KL+ I F + P SE + + + + + P L Y+ L+ L +
Sbjct: 1016 PLKKKLVSTITGAFSDIRPPNWSVSEPYKVFLQNQDLLWNPELSYYMNLIKRLSETI--- 1072
Query: 1186 LNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIE 1245
SG + + N+ P + P++ L +E
Sbjct: 1073 ------SGKNVFYTTDWRFNEFP----NAPAH--------------------ALYVTCVE 1102
Query: 1246 ILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVG-QGSVLPTSPSGGSTDSLG 1304
+L LPV+ + + ++L+ ++V+ + Q Y N+VG + LP G D L
Sbjct: 1103 LLGLPVAPALVANNLIDVIVSGYAVIPQKEIHSY--INAVGIVMAALPEPYWTGIYDRLK 1160
Query: 1305 ASRSTPSV 1312
+TP++
Sbjct: 1161 EMLNTPNM 1168
>gi|66826893|ref|XP_646801.1| hypothetical protein DDB_G0270434 [Dictyostelium discoideum AX4]
gi|74858180|sp|Q55BN0.1|MED23_DICDI RecName: Full=Putative mediator of RNA polymerase II transcription
subunit 23; AltName: Full=Putative mediator complex
subunit 23
gi|60474630|gb|EAL72567.1| hypothetical protein DDB_G0270434 [Dictyostelium discoideum AX4]
Length = 1662
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 103/467 (22%), Positives = 202/467 (43%), Gaps = 60/467 (12%)
Query: 429 MISEAVIDRIVELL-KLTNS------EVNCWHDWLIFSDVFFFLVKSGCIDFVDFVDKLV 481
+I+EA I + ++LL K N E N W +WL+FS+ F+FL ++G +D F+ L
Sbjct: 455 IITEATISKTMQLLNKYPNQIIENQIENNSWKEWLLFSEQFYFLCENGLVDLEQFIVTLS 514
Query: 482 -SRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRK------ILSFHRED 534
R+ +GD ++ N V L+++ I ++ V + V + +LSF D
Sbjct: 515 EKRMNNGDP--IKDNMVVLLISKTIIIQDVKTLFKQHLQNVNSNHYGHLIPLVLSFVNND 572
Query: 535 RCTDPNNPQSILLDFISSCQNLRIWSLNTST---------REYLNNEQLQKG--KQIDEW 583
P Q+I L F + +NT+T ++ L+N Q +Q W
Sbjct: 573 -SNYPIISQNISLYFF-------LMRINTNTENPEIIAHIKKLLDNFNFQFTLFQQYRNW 624
Query: 584 WRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGVTEL-FPGSNLPP 642
W + + + D + F ++ + ++ + S+ + FPG
Sbjct: 625 WESEKVKQKPEFFTTIQD--ITYFSIICNVIPTEGEMELIRFQSNGSDQSIQFPGVG--- 679
Query: 643 NERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAP 702
+V ++ P+ +L SL KL + + +V S +E Y R + P
Sbjct: 680 GIGTVVTGKIKPVSNLILLNLSLRCRRKLIQESVLLLLDKEVPISPGFLEDYCRTVHYTP 739
Query: 703 HSLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPLYRYQGKTKTLMYDITKI---- 758
+ LFS+ + ++ V+E V++RLL + + + L+ + I
Sbjct: 740 GPVSPFLFSYFKK-----FHRLAPIHAVIESVSHRLLKVLKSNKELAVLLRALQDIQTQK 794
Query: 759 -ISALKVKRG-DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 816
I +++ R D+ +L+ + +L ++LI + +E S + NR + ++A
Sbjct: 795 PIQNIQLSRSIDYLLLKASISLPVDLISA--------KEIWKSLDLGLFNNRRLITSIAR 846
Query: 817 IIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDAL 863
+IK +GI D + + + +E ++ + +S+ TL +FP +L++
Sbjct: 847 LIKLKGIQDFNRISDVPVFIENCFKSNPYCFSKSTLEFFPDILKNEF 893
Score = 44.3 bits (103), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 77/172 (44%), Gaps = 30/172 (17%)
Query: 988 VLTHELLPLDILLLALIDRDDDPHALRIVIT-LLDRQELQQRVKLYCMNRGPPEHWLYSG 1046
+ T+++L L+ +LLAL+DRDD P I+ T L E+Q R++ + P + S
Sbjct: 1052 IFTYKILTLNSVLLALLDRDDHPSMPTILDTFLFSSAEIQNRLQFFS---TYPSDFFISQ 1108
Query: 1047 LFKRVELQKALGNHLSWKERY-----------------------PTFFDDIAARLLPVIP 1083
F+ + + + R+ P ++ + +RL+P++
Sbjct: 1109 SFRNDD--NYFIKNCEFNNRFNDLIPTVIDPNTLIEQSTQDTILPIYYSNSISRLMPIVE 1166
Query: 1084 LIVYRLIENDAMDSADRVLATYSSFLAYY-PLRFSFVRDILAYFYGHLPGKL 1134
+I+ + IE + D ++ + ++ YY + + ++D L Y+Y KL
Sbjct: 1167 IIISKSIELNNGDLFEKTINHFNIPYHYYQDEKETTIKDTLIYYYDSQLFKL 1218
>gi|328715200|ref|XP_001951332.2| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Acyrthosiphon pisum]
Length = 1435
Score = 69.7 bits (169), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 139/704 (19%), Positives = 274/704 (38%), Gaps = 132/704 (18%)
Query: 628 SAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
S G T G+ N M PL M++L +++ + L + +
Sbjct: 555 SGGTTSPISGNASSSN----AMGPTTPLSMAVLDSLTIHAKMSLIHSIVTHVLKLAQSKS 610
Query: 683 QVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
+ + A+ ETY+RL++ SL F ++Q P++ G+ +LE+ +YR+
Sbjct: 611 NLALAPALAETYSRLLVYTEIESLGIKGF--ISQVLPTVFKSHAWGILYTLLEMFSYRMH 668
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L N + Q F
Sbjct: 669 HIQPHYRVQ-----LLSHLHSLAAVPQTNQTQLHLCVESTALRLITGLGSNEVQPQLSRF 723
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEK 850
+ + S E E LNR V+ LA + G + + + + +L IMA + HTW+
Sbjct: 724 LSEPKTLVSAE-CEELNRALVLTLARSMHITGTSASQEGSWCKELLTTIMANTPHTWAPH 782
Query: 851 TLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFP 910
TL+ FP L D + +T + QQ + V + S + + + + S P
Sbjct: 783 TLQCFPPALADFFV----HNPITKENKQQLKKAVEEEYRNWASMTNENDIIAHF---SVP 835
Query: 911 Q-HRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQR 969
H +LC ++++ + IN ++L +++++ D L+ V +
Sbjct: 836 TAHPLFLCLLWKMIIET--DRINPIA-YKILERIGARALSAHLRKFCDYLVFKFAVSEEG 892
Query: 970 GHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQE 1024
H + K I+ + + ++ +D L+L L R + ++ + L E
Sbjct: 893 QH-----VNKCVDAINSMIWKYNIVTIDRLVLCLALRTQEGSEAQVCFFIIQLLLFKGAE 947
Query: 1025 LQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------PTF 1070
+ RV + + PEHW S +K L H + E++ P +
Sbjct: 948 FRARVCEF-VKENSPEHWKQSNWH-----EKHLAFHRKYPEKFAPEGILDPASYQPLPVY 1001
Query: 1071 FDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH 1129
F ++ R LPV ++++R +E S + +L ++ +++ + L Y+
Sbjct: 1002 FGNVCLRFLPVFDIVIHRYLELPPVTKSLETLLDHLGCLYKFHDRPVTYLYNTLHYYESK 1061
Query: 1130 ------LPGKLIVRILNVFDLSK--IPFSESFPQH--------------------ISSSN 1161
L KL+ +L ++ SES+ ++ ++ S
Sbjct: 1062 LRDRPSLKRKLVYAVLGSLCETRGCWTLSESYQRYNIQTPTSTISNSMGTSTDVTVTPSA 1121
Query: 1162 PVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEG 1221
P+ P L+Y+ L+ + TM+ +++ P N+
Sbjct: 1122 PIWVPDLEYYVMLV--------------KRITDTMNGNVKFP-------------NIDWR 1154
Query: 1222 RKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVV 1265
EF +P Y L E+++LP++ + + +SL+ +V+
Sbjct: 1155 FNEF---PNPAVYA---LYMTCAELMALPLTPASVANSLLDVVM 1192
>gi|443693191|gb|ELT94621.1| hypothetical protein CAPTEDRAFT_178592 [Capitella teleta]
Length = 1261
Score = 68.9 bits (167), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 111/499 (22%), Positives = 208/499 (41%), Gaps = 107/499 (21%)
Query: 654 PLPMSLLTGFSLNLCLKLALQMEDSIF------GGQVVASIAMVETYTRLML-LAPHSLF 706
PLPMS+L +++ + L + + V + A+VETY+RL++ + SL
Sbjct: 445 PLPMSMLDSLTVHAKMSLIHSIVTRVIRLAQNKSNAVALAPALVETYSRLLVYIEIESLG 504
Query: 707 RSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISA 761
F ++Q PS+ G+ +LE+ +YRL P YR Q L+ + + S
Sbjct: 505 IKGF--ISQLLPSVFKSHAWGILHTLLEMFSYRLHHIQPHYRIQ-----LLSHLHSLASV 557
Query: 762 LKVKRGDHRVLRLAENLCMNLILS------QRDFFSLKREGKGSTEFT---ETLNRITVI 812
+ + + E+ + LI+ Q + E K T + E LNR V+
Sbjct: 558 PQTNQNQLHIC--VESTALRLIMGLGSGEVQPQLSRVLNEPKTLTLLSSESEELNRALVL 615
Query: 813 ALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDAL----IGRID 868
LA + G + + + + +L I + H+W+ TL YFP ++ D I R D
Sbjct: 616 TLARSLHVTGCDSSGN--WCRDILTTIQQHTPHSWASHTLAYFPQVISDFYKQNPIQRED 673
Query: 869 KRGLT------IQAWQQ--AETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGA 920
K L + W+ +E+ +IN + S P ++ L S + +++
Sbjct: 674 KNTLKRSVDTEYRKWKSMASESDLINHFSMQGSQGMSPLFL-CVLWKSLVEDKRF----- 727
Query: 921 WILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV-----ELQRG-HSLQ 974
+ +VL P +++++ T D L++ ++ + SL
Sbjct: 728 ------------APTAYKVLDRLGPRLLSAHLRTFADYLVYEFATAGAGQQINKCVESLN 775
Query: 975 DLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRV 1029
DL++K C IS +D L+L L R+ + + ++ + L+ E + RV
Sbjct: 776 DLIWK-CNIIS----------VDRLVLCLALRNFEENESQVCFFIIQVVLVRSPEFRNRV 824
Query: 1030 KLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-----------------PTFFD 1072
+ + P+HW+ +G +K + H ++ ER+ P +F
Sbjct: 825 NEF-VKENAPDHWMQTGWH-----EKHMAFHRTYPERFYYDGAQDISQASQHQYLPVYFG 878
Query: 1073 DIAARLLPVIPLIVYRLIE 1091
++ R LPV ++++RL+E
Sbjct: 879 NLCLRFLPVFDILIHRLLE 897
>gi|170027961|ref|XP_001841865.1| CRSP complex subunit 3 [Culex quinquefasciatus]
gi|167868335|gb|EDS31718.1| CRSP complex subunit 3 [Culex quinquefasciatus]
Length = 1375
Score = 68.2 bits (165), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 129/640 (20%), Positives = 252/640 (39%), Gaps = 130/640 (20%)
Query: 689 AMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLY 742
A+VETY+RL++ SL F L+Q P + G+ +LE+ +YR+ P Y
Sbjct: 554 ALVETYSRLLVYTEIESLGIKGF--LSQLLPQVFKSHAWGILYTLLEMFSYRMHHIQPHY 611
Query: 743 RYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ--RDFFSLKR 794
R Q L+ + + S + + LRL L + +Q R K
Sbjct: 612 RVQ-----LLSHLHSLASVPHTNQMQLHSCVESTALRLITGLGSVEVQAQLSRYVNEPKA 666
Query: 795 EGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRY 854
G + +E LNR ++ LA ++ G + + + +L IM + HTWS+ TL+
Sbjct: 667 PGNIVSAESEELNRALILTLARSMQITGTGNDPQSTWCKDLLTSIMTNTPHTWSQHTLQC 726
Query: 855 FPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTY------------VK 902
FP +L D + + ++ + QLL S D Y +
Sbjct: 727 FPPVLNDFFV----------------QNSIPKENKQLLKKSVDEEYRNWAGMSNENDIIS 770
Query: 903 TYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 962
+ + P +LC ++++ + S + L +++++ + D L+
Sbjct: 771 HFGAAGTPP--LFLCLLFKMIVET---DTISPVAYKTLERIGARALSAHLRKLCDYLVFE 825
Query: 963 IHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALR-----IVI 1017
+ H + K I+ + + +L +D L+L L R + + + I +
Sbjct: 826 VSNSGVGAH-----VNKCVDTINDMIWKYNILTIDRLVLCLSLRTLEGNEAQVSFCIIQL 880
Query: 1018 TLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY---------- 1067
LL E + R++ + +N PEHW + +R L H + E++
Sbjct: 881 LLLKTSEFRNRLQEF-VNNNSPEHWKQNNWHER-----HLAFHQKFPEKFAPDESVSHPS 934
Query: 1068 --PTFFDDIAARLLPVIPLIVYRLIENDAMDSA--DRVLATYSSFLAYYPLRFSFVRDIL 1123
P +F ++ R LPV+ + ++R +E A S D +L S ++ +++ + L
Sbjct: 935 TLPVYFGNVCLRFLPVLDITIHRYLEVPATMSKTLDVLLDHLGSLYKFHDRPITYLYNTL 994
Query: 1124 AYFYG------HLPGKLIVRILNVFDLSK---IPFSESFPQHISSSNPVM--CPPLDYFA 1172
Y+ HL +L+ ++ + ++ + +++ + + P L+Y+
Sbjct: 995 HYYEKRLRERPHLKRRLVGTVIGSLKDVRPENWALTKQYHEYMLKKDETVNWLPELNYYI 1054
Query: 1173 TLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRK-EFYQNQDP 1231
TL+ + T+D +NV +G F + +P
Sbjct: 1055 TLV--------------RRMQDTIDG-----------------NNVFQGTDWRFNEFPNP 1083
Query: 1232 GTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTL 1271
+ L + +E+L LPV + +SL+ +VV P +
Sbjct: 1084 PAHA---LYVSCVELLGLPVGPQTVANSLIDVVVKGYPVI 1120
>gi|327261891|ref|XP_003215760.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Anolis carolinensis]
Length = 1433
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 159/748 (21%), Positives = 291/748 (38%), Gaps = 143/748 (19%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 346 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 400
Query: 517 DSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
D V +L + E C D N PQS F +C IW ++ + + + +N +
Sbjct: 401 DFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAHSDNSK 452
Query: 574 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETVMN 624
LQ K E+ +Q + + M+D + + T ++ P V
Sbjct: 453 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSECFTLPMGVLVET 508
Query: 625 WLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 681
+ + PG+N M + PLPM+LL +++ + L + +
Sbjct: 509 IYGNGNMRTPLPGTNC------MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 562
Query: 682 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 736
+ + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 563 AKSSLALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 620
Query: 737 RL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLA-ENLCMNLILS------Q 786
R+ P YR Q ++ + S V + + L L E+ + LI + Q
Sbjct: 621 RMHHIQPHYRVQL--------LSNLHSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQ 672
Query: 787 RDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMA 841
F E K S E +E LNR ++ LA +D+ + + +L+ IM
Sbjct: 673 PQFTRFLNEPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMN 731
Query: 842 TSQHTWSEKTLRYFPSLLRDALI-------GRID-KRGLTIQAWQQAETTVINQCTQLLS 893
+ H W+ TL FP+ L+ R + K+ + + + T+ N S
Sbjct: 732 FTPHNWASHTLSCFPAPLQAFFKQNNVPQESRFNLKKNVEEEYRKWKSMTIENDIITHFS 791
Query: 894 PSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIY 953
P +LC +L++ ++IN RVL + ++I
Sbjct: 792 MQGSPPL--------------FLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHIR 834
Query: 954 TMVDVLLHHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHA 1012
T D L++ E Q L C I + V + ++ LD L+L L R + +
Sbjct: 835 TFADFLVY----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNE 888
Query: 1013 LRIV-----ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY 1067
++ + LL + + RV + + PEHWL + + H+S+ ++Y
Sbjct: 889 AQVCYFIIQLLLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKY 938
Query: 1068 ------------------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVL 1102
P +F ++ R LPV ++++R +E S + +L
Sbjct: 939 PEKLYFEGLAEQVNPPVQTQSQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLL 998
Query: 1103 ATYSSFLAYYPLRFSFVRDILAYFYGHL 1130
++ +++ + L Y+ GHL
Sbjct: 999 DHLGGLYKFHDRPVTYLYNTLHYYEGHL 1026
>gi|198432439|ref|XP_002122763.1| PREDICTED: similar to mediator of RNA polymerase II transcription
subunit 23 [Ciona intestinalis]
Length = 1386
Score = 67.8 bits (164), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 148/727 (20%), Positives = 281/727 (38%), Gaps = 157/727 (21%)
Query: 642 PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-GQVVASI----AMVETYTR 696
P + + P M LL +++ + + + I Q +S+ A+VETY+R
Sbjct: 518 PGNNCVAFNKTVPCSMDLLDTLTVHTKMSMLHSISTKIQKFAQAKSSVGLAPALVETYSR 577
Query: 697 LMLLAPHSLF--RSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRL---LPLYRYQGKTKTL 751
L++ + L S + + A G+ +LE+++YR+ P YR Q
Sbjct: 578 LLIYYEIETLGIKILVSQVVPKVYEYRA-WGILNTLLELMSYRMHHIQPNYRIQL----- 631
Query: 752 MYDITKIISALKVKRGDHRVLRLA-ENLCMNLILSQRDFFSLK-------REGKGS--TE 801
+T + + + R L L E+ + LI+ D F +K E K S ++
Sbjct: 632 ---LTHLHTLANSPHANQRQLHLRLESTALKLIMG-FDNFGIKPQLVRMFNEQKQSIVSQ 687
Query: 802 FTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSL 858
+E LNR+ V+ LA I G+ A++ + +L+ +M+ + H W ++TL FP
Sbjct: 688 KSEELNRVLVLTLARSIHITGLFSGAESISGSWCTDILKAVMSATPHRWPQQTLACFPQS 747
Query: 859 LRDAL----IGRIDKRGLTIQAWQQ-----------------------AETTVINQCTQL 891
++D + ++K+ L Q+ E +N +Q
Sbjct: 748 IQDFFNHSNVEPLNKKQLKTNVEQEYIKWAPLLSADGMDSSSSSGSSLTEADALNHFSQ- 806
Query: 892 LSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSN 951
P P Y LC +L + E S+ +VL +++ +
Sbjct: 807 --PGTPPYY---------------LCLLWKVLFE---EKKLSSTSYKVLERIGASQLSQH 846
Query: 952 IYTMVDVLLHHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDP 1010
+ D L++ V L+ G + K CAN+ V + ++ LD L+L L R +
Sbjct: 847 VRKFSDFLVYEFSV-LEGGSDV-----KICANVLQDMVWKYNIVFLDRLILCLALRSSEA 900
Query: 1011 HALRIVI-----TLLDRQELQQRVKLYCMNRGPPEHWL----------YSGLFKRVELQK 1055
+ +++ L+ + RV+ + + +HW+ Y F +
Sbjct: 901 NDVQVAFFIIQYLLIKPDDFLNRVRSFDHDVENLDHWMQDDWHAKHMAYHQKFPEHYFFE 960
Query: 1056 ALGNHLSWKER------------YPTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVL 1102
L H S E+ PT+F +I R LPV+ ++++R +E + S + +L
Sbjct: 961 GLVAHCSSPEQPNATGEKPQPTYLPTYFCNITLRFLPVLDIVIHRCLELPPSSKSLETLL 1020
Query: 1103 ATYSSFLAYYPLRFSFVRDILAYFYGHLPG------KLIVRILNVFDLSKIP---FSESF 1153
++ +++ + L Y+ L G KL+ I+ +K P SE+F
Sbjct: 1021 EHLGLLYKFHDQPVTYLFNTLHYYESKLRGRHLLKKKLVSTIIGAITKNKPPGWILSETF 1080
Query: 1154 PQHISSSNPVMCPPLD-YFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQ 1212
++ N P Y+ L+ L N V G M +S +
Sbjct: 1081 MDYLQQPNDQQWQPDSVYYCQLIQRLANTV----------GGKMTSSFSS---------- 1120
Query: 1213 SGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLI 1272
+++ N+ P + L +E L+LP+ Q+ +L+ +V+ Q +
Sbjct: 1121 ----------RDWRFNEFPNASSH-ALHVTCVEALALPLPGEQVGQALMDVVLKTQSFVE 1169
Query: 1273 QTSNGPY 1279
+ + P+
Sbjct: 1170 REQSLPW 1176
>gi|195383738|ref|XP_002050583.1| GJ22230 [Drosophila virilis]
gi|194145380|gb|EDW61776.1| GJ22230 [Drosophila virilis]
Length = 1413
Score = 66.6 bits (161), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 140/697 (20%), Positives = 276/697 (39%), Gaps = 104/697 (14%)
Query: 658 SLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQR 716
SL ++L QM +V + A++ETY RL++ SL + L Q
Sbjct: 530 SLTVHSKMSLIHSFVTQMLKQAQSKTLVPAPALIETYARLLVYTEIESL--GIKGFLTQL 587
Query: 717 NPSLLAKVGVTPL--VLEIVNYRLLPL---YRYQGKTKTLMYDITKIISALKVKRG-DHR 770
P++ L ++E+ +YRL + YR Q + + +++ +
Sbjct: 588 LPTVFKNQAWAMLHTLMEMFSYRLHHVPTHYRVQLLSLLYTLSSVPPTNKMQLNLCFEST 647
Query: 771 VLRLAENLCMNLILSQ-RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHV 829
LRL ++ SQ + + K G ++ +E LNR+ ++ LA + G D +
Sbjct: 648 ALRLITSIGSAEFQSQFSRYLNDKSPGGVASNESEELNRVLILTLARSMHVHGGGD-ELA 706
Query: 830 LYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCT 889
+ + L IM + H+W ++L FP L + + + QQ + +V +
Sbjct: 707 GWCKDFLSNIMQHTPHSWPMQSLACFPPALNEYFT----QNNHPAENKQQLKKSVEEEYR 762
Query: 890 QLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVT 949
S S + + ++ + + +LC I+ + E+I S ++L S ++
Sbjct: 763 NWTSMSNENDIIAHFIRPN--TNPLFLCLLFKIIWET--ESI-SPVAYKILEGISARALS 817
Query: 950 SNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDD 1009
+++ D L+ E+ +D + K I+ + ++ +D L+L L R +
Sbjct: 818 THLRKFCDYLV----AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRLVLCLALRTHE 873
Query: 1010 PHALRIVITLL-----DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWK 1064
+ ++ + ++ EL+ RV+ +C + P +HW S +K L H ++
Sbjct: 874 GNEAQVCLIIIQLLLLKASELRNRVQEFCKDNNP-DHWKQSNWH-----EKHLQFHQNYP 927
Query: 1065 ERY-----------PTFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLA 1110
E++ P +F ++ R LPV+ ++V+R IE + +L S
Sbjct: 928 EKFAPDESASQIPLPVYFSNVCLRFLPVLDVVVHRFIELTIPNVHQILGIILDHLSILYK 987
Query: 1111 YYPLRFSFVRDILAYF----YGHLP--GKLIVRILNVFDL---SKIPFSESFPQHISSSN 1161
++ +++ + L Y+ LP KL+ I + F + SE + ++ S +
Sbjct: 988 FHDRPITYLYNTLHYYERILRDRLPLKKKLVSTITSAFSEIRPANWSVSEPYKVYLQSQD 1047
Query: 1162 PVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEG 1221
+ P L Y+ L+ L + + G
Sbjct: 1048 ALWTPELSYYMNLIRRLADTI-------------------------------------SG 1070
Query: 1222 RKEFYQ-----NQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSN 1276
+ FY N+ P T + T V E+L LP++ S + +++ ++VN + Q
Sbjct: 1071 KNVFYTTDWRFNEFPNAPTHALYVTCV-ELLGLPLAPSVVAGNIIDVIVNGYAVVPQKEI 1129
Query: 1277 GPYGASNSVGQG-SVLPTSPSGGSTDSLGASRSTPSV 1312
Y N+VG + LP D L +TP++
Sbjct: 1130 HSY--INAVGIVLAALPEPYWSAIYDRLQDMLNTPNM 1164
>gi|340716902|ref|XP_003396930.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Bombus terrestris]
Length = 1355
Score = 65.5 bits (158), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 145/723 (20%), Positives = 286/723 (39%), Gaps = 119/723 (16%)
Query: 654 PLPMSLLTGFSLNLCLKLALQMEDSIFGG-----QVVASIAMVETYTRLMLLAP-HSLFR 707
PL MS+L +++ + L + + + + A+VETY+RL++ SL
Sbjct: 538 PLSMSILDSLTVHSKMSLIHSIVTHVIKSAQSKSNMALAPALVETYSRLLVYTEIESLGI 597
Query: 708 SLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISAL 762
F ++Q P++ G +LE+ +YR+ P YR Q L+ + + +
Sbjct: 598 KGF--ISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQ-----LLSHLHSLAAVP 650
Query: 763 KVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 816
+ + + LRL L + Q F + + S E +E LNR V+ LA
Sbjct: 651 QTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAE-SEELNRALVLTLAR 709
Query: 817 IIKTRGIADADHV-LYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 875
+ G H + + +L IM + H+W+ TL+ FP +L + + + +
Sbjct: 710 SMHVTGTGSDSHSGTWCKELLNTIMQNTPHSWANHTLQCFPPVLSEFF----QQNSVPKE 765
Query: 876 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSAN 935
QQ + V + S S + + + P +LC I+ + + S
Sbjct: 766 NKQQIKKAVEEEYRNWASMSNENDIIAHFSVPGTPP--LFLCLLWKIIFET---DRISPI 820
Query: 936 LLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLP 995
++L +++++ D L+ + H + K ++ + + ++
Sbjct: 821 AYKILERIGARALSAHLRKFCDYLVFEFANSVGGQH-----VNKCVDTVNDMIWKYNIVT 875
Query: 996 LDILLLALIDR-----DDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR 1050
+D L+L L+ R D I + LL EL+ R + + + PEHW S
Sbjct: 876 IDRLVLCLVLRTHEGSDAQVCFFIIQLLLLKAIELRNRTQEF-VKENSPEHWKQSNWH-- 932
Query: 1051 VELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIE 1091
+K L H + E++ P +F ++ R LPV ++V+R +E
Sbjct: 933 ---EKHLAFHRKFPEKFAPEGIMEQTSGGPSQYQSLPVYFGNVCLRFLPVFDIVVHRYLE 989
Query: 1092 NDAM-DSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHL---PG---KLIVRILNVFDL 1144
A+ S + +L ++ +++ + L Y+ L PG +L+ +
Sbjct: 990 IPAVSKSLETLLEHLGCLYKFHDRPVTYLYNTLHYYERKLRDRPGMKRRLVTAVFGSLKE 1049
Query: 1145 SKIP---FSESFPQHISSS-NPVMC--PPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA 1198
+ P SE++ +++ S + V+ P LDY+ L+ +V
Sbjct: 1050 IRAPGWALSEAYQMYMTRSIDEVIAWMPELDYYIRLVRRIVE------------------ 1091
Query: 1199 SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVS 1258
+ SG ++ F + +P + L +E++++PV+A+ + +
Sbjct: 1092 ------------TMSGTAHFPATDWRFNEFPNPAAHA---LYVTCVELMAVPVAANIVAN 1136
Query: 1259 SLVQIVVNIQPTLIQTSNGPYGASNSVG-QGSVLPTSPSGGSTDSLGASRSTPSVSGINT 1317
SL+ +V + + S+ + N VG + LP D L A+ S+P ++ N
Sbjct: 1137 SLLDVVA--KGYTVIPSDEIHLWINCVGLLLAALPECYWSALHDRLVATISSPGLANWNY 1194
Query: 1318 SSF 1320
S+
Sbjct: 1195 SNL 1197
>gi|348506541|ref|XP_003440817.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Oreochromis niloticus]
Length = 1394
Score = 65.1 bits (157), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 239/1183 (20%), Positives = 448/1183 (37%), Gaps = 230/1183 (19%)
Query: 429 MISEAVIDRIVELLKLTNSEVNCWHD--------WLIFSDVFFFLVKSGCIDFVDFVDKL 480
++ E ++D +V ++ + +E + D W S F V F V L
Sbjct: 305 VLEEQLVDLVVYAMERSETEEHFDADIGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSL 364
Query: 481 VSRLQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDRCT--- 537
+L G I +H+ W+L Q I + AL +D V +L + E C
Sbjct: 365 HQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL-ADFLPVMKLFDLL--YPEKECIPVP 420
Query: 538 DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ----KGKQIDEWWRQVSKGDRM 593
D N PQS F +C IW ++ + + +N +LQ ++ + Q S ++
Sbjct: 421 DINKPQSTH-SFAMTC----IW-IHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQSLRNKT 474
Query: 594 MDYMNMDDRSVGMFWVVSYTMAQ----PACETVMNWLSSAGVTELFPGSNLPPNERLMVM 649
+ M D + + T ++ P V + + PG+N M
Sbjct: 475 L---GMSDYKIALLCNAYSTNSECFTLPMGVLVETIYGNGSMRINLPGTNC------MAS 525
Query: 650 REVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLML-LAPH 703
V PLPM+LL +++ + L + + + + A+VETY+RL++ +
Sbjct: 526 GSVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSRLLVYMEIE 585
Query: 704 SLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKI 758
SL + ++Q P++ G+ +LE+ +YR+ P YR Q ++ +
Sbjct: 586 SL--GIKGFISQLLPNVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQL--------LSHL 635
Query: 759 ISALKVKRGDHRVLRLA-ENLCMNLILS------QRDFFSLKREGKG--STEFTETLNRI 809
S V + + L L E+ + LI + Q F + K S E +E LNR
Sbjct: 636 HSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLNDPKTVLSAE-SEELNRA 694
Query: 810 TVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGR 866
++ LA +D+ + + +L+ IM+ + H W+ TL FP+ L+
Sbjct: 695 LILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNWASHTLSCFPAPLQ----AF 750
Query: 867 IDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQG 926
+ + ++ + V + + S + + + + P +LC +L++
Sbjct: 751 FKQNNVPQESRFNLKKNVEEEYRKWKSMANENDIITHFSMQGSPP--LFLCLLWKMLLEM 808
Query: 927 HPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANI-S 985
++IN RVL + +++ T D L++ E Q L C I +
Sbjct: 809 --DHINQIG-FRVLERIGARALVAHVRTFADFLVY----EFSTSAGGQQL--NKCIEILN 859
Query: 986 FFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPE 1040
V + ++ LD L+L L R + + ++ + LL + + RV + + PE
Sbjct: 860 DMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVNDF-VKENAPE 918
Query: 1041 HWLYSGLF-KRVELQKALGNHLSWK--------------ERYPTFFDDIAARLLPVIPLI 1085
HWL + K + K L ++ + P +F ++ R LPV ++
Sbjct: 919 HWLQNDWHSKHMNYHKKYPEKLYFEGLADQVNPPMQLQPQYLPIYFGNVCLRFLPVFDIV 978
Query: 1086 VYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRI 1138
++R +E S + +L ++ +++ + L Y+ H L KL+ I
Sbjct: 979 IHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYERHLRDRTNLKRKLVHAI 1038
Query: 1139 LNVFDLSKIP---FSES---FPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKS 1192
++ ++ P SE+ F + N V P Y+ L+ LV+ +
Sbjct: 1039 MSSLKDNRTPGWCLSETYLRFGMNAREEN-VWIPDDTYYCKLIGRLVDTMA--------- 1088
Query: 1193 GSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVS 1252
KSP GP + R F + +P + L +E+++L V
Sbjct: 1089 ------------GKSP-----GPFPNCDWR--FNEFPNPAAHA---LHVTCVELMALAVP 1126
Query: 1253 ASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQG-SVLPTSPSGGSTDSLGASRSTPS 1311
+ ++L+ +V+ QP + + + + N++G + LP D +
Sbjct: 1127 GKDVGNALLNVVLKSQPLVPRENITAW--MNAIGLVITALPEPYWIVLHDRI-------- 1176
Query: 1312 VSGINTSSFVSRSGYTCQQLSCLLIQACGLLLAQLPPDFHMQLYMEASRIIKESWWLADG 1371
VS I++ + S + +T + L AC
Sbjct: 1177 VSVISSPALTSETEWTGYPFALLDFTAC-------------------------------- 1204
Query: 1372 KRSLGELDSAVGYALLDPTWAAQDNTSTAIGNIVALLHSFFSNLPQEWLEGTHVIIKHLR 1431
+S E++ + AL W ++IG + +L+ F S + L+
Sbjct: 1205 HQSYSEMNCSYVLALAHAVWH-----HSSIGQL-SLIPKFLS--------------ETLK 1244
Query: 1432 PITSVAM-LRIVFRIMGPLLPRLVNAHTLFNKTLALLLNTMGDVYGKNTLPPAPVEASEI 1490
PI L V+ ++GP L R T + + M K+ S +
Sbjct: 1245 PIVKTEFQLLYVYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDKHC-----QHLSYM 1299
Query: 1491 ADLIDFLHHVVH-YEGQGGPVQASSKPRPEVLVLTGRAAESLR 1532
+ DFL+H+ + Y G S K + E +++T R A LR
Sbjct: 1300 DPICDFLYHIKYMYTGD------SVKEQVEKIIMTLRPAMKLR 1336
>gi|410916393|ref|XP_003971671.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Takifugu rubripes]
Length = 1391
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 192/921 (20%), Positives = 358/921 (38%), Gaps = 162/921 (17%)
Query: 429 MISEAVIDRIVELLKLTNSEVNCWHD--------WLIFSDVFFFLVKSGCIDFVDFV--- 477
++ E ++D +V ++ + SE + D W S F V F V
Sbjct: 305 VLEEQLVDLVVYAMERSESEEHFDADVGGTSQLLWQHLSSQLIFFVLFQFASFPHMVLSL 364
Query: 478 -DKLVSR-LQDGDNHILRTNHVTWLLAQIIRVELVMGALNSDSRKVETTRKILSFHREDR 535
KL R L G +H++ W+L Q I + AL +D V +L + E
Sbjct: 365 HQKLAGRGLNKGRDHLM------WVLLQFISGSIQKNAL-ADFLPVMKLFDLL--YPEKE 415
Query: 536 CT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ-----KGKQIDEWWRQV 587
C D N PQS F +C IW ++ + + +N +LQ K E+ +Q
Sbjct: 416 CIPVPDINKPQSTH-SFAMTC----IW-IHLNRKAQNDNSKLQIPIPHSLKLHHEFLQQS 469
Query: 588 SKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETVMNWLSSAGVTELFPGSNLPPN 643
+ + M D + + T ++ P V + + PG+N
Sbjct: 470 LRNKSL----GMSDYKIALLCNAYSTNSECFPLPMGALVETIYGNGTMRINLPGTNC--- 522
Query: 644 ERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLM 698
M V PLPM+LL +++ + L + + V + A+VETY+RL+
Sbjct: 523 ---MASAAVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSVALAPALVETYSRLL 579
Query: 699 L-LAPHSLFRSLFSHLAQRNPSLLA--KVGVTPLVLEIVNYRL---LPLYRYQGKTKTLM 752
+ + SL + ++Q P++ G+ +LE+ +YR+ P YR Q L+
Sbjct: 580 VYMEIESL--GIKGFISQLLPNVFKCHAWGILHTLLEMFSYRMHHIQPHYRVQ-----LL 632
Query: 753 YDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETL 806
+ + + + + + LRL L + + Q F + S E +E L
Sbjct: 633 SHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQPQFSRFLSDPKTVLSAE-SEEL 691
Query: 807 NRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDAL 863
NR ++ LA +D+ H + + +L+ IM + H W+ TL FP+ L+
Sbjct: 692 NRALILTLARATHVTDFFTGSDSIHGTWCKDILQTIMNFTPHNWASHTLSCFPAPLQ--- 748
Query: 864 IGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWIL 923
+ + ++ + V + + S + + + + P +LC +L
Sbjct: 749 -AFFKQNNVPQESRFNLKKNVEEEYRKWKSMANENDIITHFSMQGSPP--LFLCLLWKML 805
Query: 924 MQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACAN 983
++ ++IN RVL + +++ T D L++ E Q L C
Sbjct: 806 LET--DHINQIG-FRVLERIGARALVAHVRTFADFLVY----EFSTSAGGQQL--NKCIE 856
Query: 984 I-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRG 1037
I + V + ++ LD L+L L R + + ++ + LL + + RV + +
Sbjct: 857 ILNDMVWKYNIVTLDRLILCLAMRSHENNEAQVCYFIIQLLLLKPNDFRNRVNDF-VKEN 915
Query: 1038 PPEHWLYSGLF-KRVELQKALGNHLSWK--------------ERYPTFFDDIAARLLPVI 1082
PEHWL S K + K L ++ + P +F ++ R LPV
Sbjct: 916 APEHWLQSDWHNKHMNYHKKYPEKLYFEGLAEQVNPPMQLQPQYLPIYFGNVCLRFLPVF 975
Query: 1083 PLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYF------YGHLPGKLI 1135
++++R +E S + +L S ++ +++ + L Y+ +L KL+
Sbjct: 976 DIVIHRFLELLPVSKSLETLLDHLGSLYKFHDRPVTYLYNTLHYYERQLRDRTNLKRKLV 1035
Query: 1136 VRILNVFDLSKIP---FSESFPQHISSSNP----VMCPPLDYFATLLLGLVNNVIPALNY 1188
I++ ++ P SE++ + NP V P Y+ L+ LV+ +
Sbjct: 1036 HAIMSSLKDNRSPGWCLSETYLKF--GINPREDNVWIPDDTYYCKLIGRLVDTMA----- 1088
Query: 1189 NSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILS 1248
KSP GP + R F + +P + L +E+++
Sbjct: 1089 ----------------GKSP-----GPFPNCDWR--FNEFPNPAAHA---LHVTCVELMA 1122
Query: 1249 LPVSASQIVSSLVQIVVNIQP 1269
L V + ++L+ +V+ QP
Sbjct: 1123 LAVPGKDVGNALLNVVLKSQP 1143
>gi|195026568|ref|XP_001986286.1| GH21275 [Drosophila grimshawi]
gi|193902286|gb|EDW01153.1| GH21275 [Drosophila grimshawi]
Length = 1416
Score = 64.3 bits (155), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 138/661 (20%), Positives = 267/661 (40%), Gaps = 85/661 (12%)
Query: 658 SLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQR 716
SL ++L QM +V + A++ETY RL++ SL + L Q
Sbjct: 530 SLTLHSKMSLIHSFVTQMLKQAQSKTLVPAPALIETYARLLVYTEIESL--GIKGFLTQL 587
Query: 717 NPSLLAKVGVTPL--VLEIVNYRLLPL---YRYQGKTKTLMYDITKIISALKVKRG-DHR 770
P++ L ++E+ +YRL + YR Q + + +++ +
Sbjct: 588 LPTVFKNHAWAMLHTLMEMFSYRLHHVPTHYRVQLLSLLYSLSSVPQTNKMQLNLCFEST 647
Query: 771 VLRLAENLCMNLILSQ-RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIADADHV 829
LRL ++ SQ + K G ++ +E LNR+ ++ LA + G D +
Sbjct: 648 ALRLITSIGSAEFQSQFSRHLNDKSPGGVASNESEELNRVLILTLARSMHVHGGGD-ELA 706
Query: 830 LYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCT 889
+ + L IM + H+W ++L FP L + + + QQ + +V +
Sbjct: 707 GWCKDFLSNIMQHTPHSWPLQSLACFPPALNEYFT----QNNHPAENKQQLKKSVEEEYR 762
Query: 890 QLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVT 949
S S + + +L + + +LC I+ + E+I S ++L S ++
Sbjct: 763 NWTSMSNENDIIAHFLRPN--TNPLFLCLLFKIIWET--ESI-SPVAYKILEGISARALS 817
Query: 950 SNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDD 1009
+++ D L+ E+ +D + K I+ + ++ +D L+L L R +
Sbjct: 818 THLRKFCDYLV----AEVASSSDGRDFIHKCVDTINNMIWKFNVVTIDRLVLCLALRTHE 873
Query: 1010 PHALRIVITLL-----DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWK 1064
+ ++ + ++ EL+ RV+ +C + P +HW S +K + H S+
Sbjct: 874 GNEAQVCLIIIQLLLLKATELRNRVQEFCKDNNP-DHWKQSNWH-----EKHISFHQSFP 927
Query: 1065 ERY-----------PTFFDDIAARLLPVIPLIVYRLIE---NDAMDSADRVLATYSSFLA 1110
E++ P +F ++ R LPV+ ++V+R IE + + +L S
Sbjct: 928 EKFAPDESASQIPLPVYFSNVCLRFLPVLDVVVHRFIELTIPNVLQILCIILDHLSILYK 987
Query: 1111 YYPLRFSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDY 1170
++ +++ + L Y+ L L+V+ + FSE P + S S+P
Sbjct: 988 FHDRPITYLYNTLHYYERILRDHLVVK-KKLMSAITSAFSEIRPANWSVSDP-------- 1038
Query: 1171 FATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQ--- 1227
+ L G P L+Y M+ R ++ G+ FY
Sbjct: 1039 YKVYLQGQDTLWTPELSY------YMNLIRRL-------------ADTISGKNVFYTTDW 1079
Query: 1228 --NQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSV 1285
N+ P T + T V E+L LP++ S + S++ ++V+ + Q Y N+V
Sbjct: 1080 RFNEFPNAPTHALYVTCV-ELLGLPLAPSVVAGSIIDVIVDGYAVIPQKEIHSY--INAV 1136
Query: 1286 G 1286
G
Sbjct: 1137 G 1137
>gi|157138530|ref|XP_001664240.1| mediator complex, 155kD-subunit, putative [Aedes aegypti]
gi|121954381|sp|Q16HH9.1|MED23_AEDAE RecName: Full=Mediator of RNA polymerase II transcription subunit 23;
AltName: Full=Mediator complex subunit 23
gi|108869479|gb|EAT33704.1| AAEL014021-PA [Aedes aegypti]
Length = 1409
Score = 63.9 bits (154), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 141/680 (20%), Positives = 266/680 (39%), Gaps = 124/680 (18%)
Query: 689 AMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLL--AKVGVTPLVLEIVNYRL---LPLY 742
A+VETY+RL++ SL F L Q P + A G+ +LE+ +YR+ P Y
Sbjct: 577 ALVETYSRLLVYTEIESLGIKGF--LGQLLPQVFKSAAWGILYTLLEMFSYRMHHIQPHY 634
Query: 743 RYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREG 796
R Q L+ + + S + + LRL L + +Q + +++
Sbjct: 635 RVQ-----LLSHLHSLASVPHTNQMQLHSCVESTALRLITGLGSVEVQAQMSRYVTEQKA 689
Query: 797 KGS--TEFTETLNRITVIALAIIIKTRGIA-DADHVLYLQTMLEQIMATSQHTWSEKTLR 853
G+ + +E LNR ++ LA ++ G D + + +L IM + HTWS+ TL+
Sbjct: 690 PGNIVSAESEELNRALILTLARSMQITGTGNDPQSTTWCKELLNSIMQNTPHTWSQHTLQ 749
Query: 854 YFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVK-TYLSHSFPQH 912
FP +L D ++ + V + QLL S D Y T +S+
Sbjct: 750 CFPPVLNDLVV----------------QHNVPKENKQLLKKSVDEEYRNWTSMSNENDII 793
Query: 913 RQYLCAGA--------WILMQGHPE-NINSANLLRVLREFSPEEVTSNIYTMVDVLLHHI 963
+ AG +L + E + S ++L +++++ + D L+ +
Sbjct: 794 GHFGTAGTPGTPPLFLCLLFKMIVETDTISPVAYKILERIGARALSAHLRKLCDYLVFEV 853
Query: 964 HVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALR-----IVIT 1018
H + K I+ + + ++ +D L+L L R + + + I +
Sbjct: 854 SNSGDGAH-----VNKCVDTINDMIWKYNIITIDRLVLCLSLRTLEGNEAQVSFCIIQLL 908
Query: 1019 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------- 1067
LL E + R++ + ++ PEHW + +R L H + E++
Sbjct: 909 LLKTSEFRNRLQEF-VSINSPEHWKQNNWHER-----HLAFHQKFPEKFTPDESVSHPSL 962
Query: 1068 PTFFDDIAARLLPVIPLIVYRLIENDAMDSA--DRVLATYSSFLAYYPLRFSFVRDILAY 1125
P +F ++ R LPV+ + ++R +E A S D +L ++ +++ + L Y
Sbjct: 963 PVYFGNVCLRFLPVLDITIHRYLEVPAAMSKTLDVLLDHLGPLYKFHDRPITYLYNTLHY 1022
Query: 1126 F----------YGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1175
+ L G +I + +V +E + ++S + +
Sbjct: 1023 YERMLRDRPQLKKRLVGTVIGSLKDVRP-DNWAVTEQYQSYMSKKDDAV----------- 1070
Query: 1176 LGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRK-EFYQNQDPGTY 1234
N +P LNY M ++ +N+ G F + +P +
Sbjct: 1071 -----NWMPDLNYYIYLVRRMQDTIDG-------------TNIFPGTDWRFNEFPNPPAH 1112
Query: 1235 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTSNGPYGASNSVGQ-GSVLPT 1293
L +E+L LPV + +SL+ +VV P + S + N++G + LP
Sbjct: 1113 A---LYVTCVELLGLPVGPQGVANSLIDVVVKGYPVI--PSQSVHNWINTIGLIMAALPE 1167
Query: 1294 SPSGGSTDSLGASRSTPSVS 1313
S G + L S P ++
Sbjct: 1168 SYWGVIYERLREVISCPQMT 1187
>gi|312382114|gb|EFR27677.1| hypothetical protein AND_05476 [Anopheles darlingi]
Length = 1489
Score = 63.5 bits (153), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 114/532 (21%), Positives = 227/532 (42%), Gaps = 55/532 (10%)
Query: 657 MSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQ 715
MSL+ +++ +K A Q + SI G +A A+VETY+RL++ SL F L Q
Sbjct: 556 MSLIHSIVMHM-IKQA-QNKSSIPNGNNMAP-ALVETYSRLLVYTEIESLGIKGF--LGQ 610
Query: 716 RNPSLLAK--VGVTPLVLEIVNYRLLPLY-RYQGKTKTLMYDITKIISALKVKRG---DH 769
P + G+ +LE+ +YR+ ++ Y+ + T ++ + + +++ +
Sbjct: 611 LLPQVFKSHAWGILYTLLEMFSYRMHHIHSHYRVQLLTHLHSLASVPHTNQMQLHSCVES 670
Query: 770 RVLRLAENLCMNLILSQ--RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI-ADA 826
LRL L + +Q R K G + +E LNR ++ LA + G +D
Sbjct: 671 TALRLIIGLGSVEVQAQLSRYVSEPKPPGNIVSAESEELNRALILTLARSMHITGTGSDP 730
Query: 827 DHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVIN 886
+ + +L+ IM + H W + TL FP +L + + + + ++ Q + TV
Sbjct: 731 QSSAWCKDLLQNIMVNTPHAWPQHTLLCFPQVLNEFFM----QHNIPKESKQLLKKTVDE 786
Query: 887 QCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPE 946
+ S + + + + P +LC ++++ + S ++L
Sbjct: 787 EFRNWASMTNENDIIAHFGMAVNPP--LFLCLVFKMIIET---DAISPVAYKILERIGAR 841
Query: 947 EVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDR 1006
+++++ + D LL + H + K I+ + + ++ +D L+L LI R
Sbjct: 842 ALSTHLRKLCDYLLFEVANSGGGAH-----VNKCVDTINDMIWKYNIVTIDRLVLCLILR 896
Query: 1007 DDDPHALR-----IVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHL 1061
D + + I + LL E + RV+ + + PEHW + +R L H
Sbjct: 897 TLDGNEAQVSFYIIQLLLLKTSEFRNRVQEF-ITINSPEHWKQNNWHER-----HLAFHQ 950
Query: 1062 SWKERY-----------PTFFDDIAARLLPVIPLIVYRLIE--NDAMDSADRVLATYSSF 1108
+ E++ P +F ++ R LPV+ +IV+R +E + D +L S
Sbjct: 951 KFPEKFAPDESVSHPTLPVYFGNVCLRFLPVLDIIVHRYLEVPTQLSKTLDVILDHLGSL 1010
Query: 1109 LAYYPLRFSFVRDILAYFYGHLPGK--LIVRILNVFDLSKIPFSESFPQHIS 1158
++ +++ + L Y+ L + L R+++ + P P H+S
Sbjct: 1011 YKFHDRPITYLYNTLHYYEVKLRDRPLLKKRLVSTKRSEESPIPAKSPLHVS 1062
>gi|449497499|ref|XP_002192529.2| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Taeniopygia guttata]
Length = 1377
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 154/740 (20%), Positives = 290/740 (39%), Gaps = 118/740 (15%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 338 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 396
Query: 515 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
+D V +L +E D N PQS F +C IW ++ + + + +N +
Sbjct: 397 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAHSDNSK 449
Query: 574 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETVMN 624
LQ K E+ +Q + + M+D + + T ++ P V
Sbjct: 450 LQIPIPHSLKLHHEFLQQSLRNKNL----QMNDYKIALLCNAYSTNSECFTLPMGVLVET 505
Query: 625 WLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 681
+ + PG+N M + PLPM+LL +++ + L + +
Sbjct: 506 IYGNGNMRTPLPGTNC------MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 559
Query: 682 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 736
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 560 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 617
Query: 737 RL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLA-ENLCMNLILS------Q 786
R+ P YR Q ++ + S V + + L L E+ + LI + Q
Sbjct: 618 RMHHIQPHYRVQL--------LSHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQ 669
Query: 787 RDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMA 841
F + K S E +E LNR ++ LA +D+ + + +L+ IM+
Sbjct: 670 PQFTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMS 728
Query: 842 TSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYV 901
+ H W+ TL FP+ L+ + + ++ + V + + S +++ +
Sbjct: 729 FTPHNWASHTLSCFPAPLQVFF----KQNNVPQESRFNLKKNVEEEYRKWKSMTSENEII 784
Query: 902 KTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLH 961
+ + +LC +L+ ++IN RVL + +++ T D L++
Sbjct: 785 THFSAQG--SSPLFLCLLWKMLLDT--DHINQIG-YRVLERIGARALVAHVRTFADFLVY 839
Query: 962 HIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV---- 1016
E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 840 ----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFII 893
Query: 1017 -ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-------- 1067
+ LL + + RV + + PEHWL + + H+S+ ++Y
Sbjct: 894 QLLLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFEG 943
Query: 1068 ----------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLA 1110
P +F ++ R LPV ++++R +E S + +L
Sbjct: 944 LAEQVNPPVQIQPQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYK 1003
Query: 1111 YYPLRFSFVRDILAYFYGHL 1130
++ +++ + L Y+ GHL
Sbjct: 1004 FHDRPVTYLYNTLHYYEGHL 1023
>gi|196008223|ref|XP_002113977.1| hypothetical protein TRIADDRAFT_28077 [Trichoplax adhaerens]
gi|190582996|gb|EDV23067.1| hypothetical protein TRIADDRAFT_28077 [Trichoplax adhaerens]
Length = 1305
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 124/572 (21%), Positives = 230/572 (40%), Gaps = 132/572 (23%)
Query: 689 AMVETYTRLMLLAPHSLFR------SLFSHLAQRNPSLLAKVGVTPLVLEIVNYRLLPL- 741
A+VETY+R+++ LF LF + + N +LEI++YRL +
Sbjct: 512 AVVETYSRILICNEVELFGIKQFVGQLFLQIVKSNAW-----NFLHAMLEILSYRLHHIQ 566
Query: 742 --YRYQGKTKTLMYDITKIISALKVKRGDHRVLRLA-ENLCMNLI--LSQRDFF-SLKR- 794
YR+Q + I + + + + + L+L+ EN + LI LS D + L R
Sbjct: 567 AHYRFQL--------LPHIYTLSGMSQTNTQQLQLSIENSALRLISGLSSCDVYPELSRS 618
Query: 795 ---EGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKT 851
E S E +E LN+ V+ LA + G+ ++ + +L+ +L QIM + H W T
Sbjct: 619 PNPEQLLSQE-SEELNKAFVLMLARAMHVTGL-ESPYGNWLENILRQIMEATPHCWPSHT 676
Query: 852 LRYFPSLLRD-------------ALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADP 898
L+ FP+ + L ++D+ T ++ + ET +N TQ + +
Sbjct: 677 LQCFPAPFKTFYNTHRHTPDSKATLRTKVDEEYRTWKSMGENET--VNYFTQQNTSNV-- 732
Query: 899 TYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDV 958
+LC +L++ N S+ R+L + +S+I D
Sbjct: 733 ----------------FLCVMWRLLLET---NRLSSVCYRILERIGAKRWSSHIRVFADF 773
Query: 959 LLHHIHVELQRGHS------LQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHA 1012
+++ H+ L DL++K + ++ LD L+L L R + +
Sbjct: 774 IVYEFSSAAGSRHASKCIQILNDLIWK-----------YNVVTLDRLILYLALRSHEGNE 822
Query: 1013 LRIV-----ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY 1067
++ + LL E + RV + + P HW + + +K + H W E++
Sbjct: 823 AQVCFFIIQLLLLKPAEFRTRVNSFVRDNSPC-HWKQNDYY-----EKHMNYHRRWTEKF 876
Query: 1068 --------------------PTFFDDIAARLLPVIPLIVYRLIENDAM-DSADRVLATYS 1106
P +F ++ R +PV+ ++++R IE + S + VL
Sbjct: 877 YFEGLQELSQSLPTSVNHYLPIYFGNVCLRFIPVLDIVIHRFIEMPPVSKSLETVLDHLG 936
Query: 1107 SFLAYYPLRFSFVRDILAYFYGHL------PGKLIVRILNVFDLSKIPF-----SESFPQ 1155
++ +++ D L Y+ HL KL+ I F I F S+ F
Sbjct: 937 CLYKFHDRPITYLYDTLHYYEKHLINYPQIKKKLVGTITGNFHKYTIQFLLLYLSDGFQS 996
Query: 1156 HISS----SNPVMCPPLDYFATLLLGLVNNVI 1183
++S P Y+ L+ L+N+++
Sbjct: 997 YLSHVEEPDREPWKPTKTYYQDLVRRLINDIL 1028
>gi|355562062|gb|EHH18694.1| hypothetical protein EGK_15351 [Macaca mulatta]
Length = 1368
Score = 63.2 bits (152), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 134/679 (19%), Positives = 269/679 (39%), Gaps = 104/679 (15%)
Query: 642 PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTR 696
P M + PLPM+LL +++ + L + + V + A+VETY+R
Sbjct: 510 PGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSVALAPALVETYSR 569
Query: 697 LML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKT 750
L++ + SL + ++Q P++ G+ +LE+ +YR+ P YR Q
Sbjct: 570 LLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQ----- 622
Query: 751 LMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTE 804
L+ + + + + + + LRL L + + Q F + S E +E
Sbjct: 623 LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLSDPKTVLSAE-SE 681
Query: 805 TLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRD 861
LNR ++ LA +D+ + + +L+ IM+ + H W+ TL FP L+
Sbjct: 682 ELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNWASHTLSCFPGPLQ- 740
Query: 862 ALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAW 921
+ + ++ + V + + S S + + + P +LC
Sbjct: 741 ---AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQGSPP--LFLCLLWK 795
Query: 922 ILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKAC 981
+L++ ++IN RVL + +++ T D L++ G L K
Sbjct: 796 MLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS-AGGQQLN----KCI 847
Query: 982 ANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNR 1036
++ V + ++ LD L+L L R + + ++ + LL + + RV + +
Sbjct: 848 EILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDF-VKE 906
Query: 1037 GPPEHWLYSGLFKRVELQKALGNHLSWKERY------------------------PTFFD 1072
PEHWL + + H+S+ ++Y P +F
Sbjct: 907 NSPEHWLQNDWHTK---------HMSYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPIYFG 957
Query: 1073 DIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHLP 1131
++ R LPV ++++R +E S + +L F ++ +++ + L Y+ HL
Sbjct: 958 NVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGFFKFHDRPVTYLYNTLHYYEMHLR 1017
Query: 1132 GKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSK 1191
+ ++ V + ++ PQ S+ + ++ N +P Y +
Sbjct: 1018 DRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE------NPWVPDDTYYCR 1070
Query: 1192 -SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLP 1250
G +D KSP GP + R F + +P + L +E+++L
Sbjct: 1071 LIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA---LHVTCVELMALA 1116
Query: 1251 VSASQIVSSLVQIVVNIQP 1269
VS ++ ++L+ +V+ QP
Sbjct: 1117 VSGKEVGNALLNVVLKSQP 1135
>gi|326915933|ref|XP_003204266.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like isoform 1 [Meleagris gallopavo]
Length = 1370
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 154/741 (20%), Positives = 291/741 (39%), Gaps = 120/741 (16%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 515 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 571
+D V +L + E C D N PQS F +C IW ++ + + + +N
Sbjct: 390 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAHSDN 440
Query: 572 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETV 622
+LQ K E+ +Q + + M+D + + T ++ P V
Sbjct: 441 SKLQIPIPHSLKHHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSECFTLPMGVLV 496
Query: 623 MNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 681
+ + PG+N M + PLPM+LL +++ + L + +
Sbjct: 497 ETIYGNGNMRISLPGTNC------MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 550
Query: 682 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 734
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 551 AHAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 608
Query: 735 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILS------ 785
+YR+ P YR Q L+ + + A +R +++ E+ + LI +
Sbjct: 609 SYRMHHIQPHYRVQ-----LLSHLHSL--AAVPQRNQNQLHLCVESTALRLITALGSSEV 661
Query: 786 QRDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIM 840
Q F + K S E +E LNR ++ LA +D+ + + +L+ IM
Sbjct: 662 QPQFTRFLSDPKSVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIM 720
Query: 841 ATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTY 900
+ + H W+ TL FP+ L+ + + ++ + V + + S + +
Sbjct: 721 SFTPHNWASHTLSCFPAPLQVFF----KQNNVPQESRFNLKKNVEEEYRKWKSMTNENEI 776
Query: 901 VKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLL 960
+ + P +LC +L++ ++IN RVL + +++ T D L+
Sbjct: 777 ITRFSVQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLV 831
Query: 961 HHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV--- 1016
+ E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 832 Y----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFI 885
Query: 1017 --ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------- 1067
+ LL + + RV + + PEHWL + + H+S+ ++Y
Sbjct: 886 IQLLLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFE 935
Query: 1068 -----------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFL 1109
P +F ++ R LPV ++++R +E S + +L
Sbjct: 936 GLAEQVNPPVQIQPQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLY 995
Query: 1110 AYYPLRFSFVRDILAYFYGHL 1130
++ +++ + L Y+ HL
Sbjct: 996 KFHDRPVTYLYNTLHYYERHL 1016
>gi|326915935|ref|XP_003204267.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like isoform 2 [Meleagris gallopavo]
Length = 1376
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 154/741 (20%), Positives = 291/741 (39%), Gaps = 120/741 (16%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 337 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 395
Query: 515 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 571
+D V +L + E C D N PQS F +C IW ++ + + + +N
Sbjct: 396 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAHSDN 446
Query: 572 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETV 622
+LQ K E+ +Q + + M+D + + T ++ P V
Sbjct: 447 SKLQIPIPHSLKHHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSECFTLPMGVLV 502
Query: 623 MNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 681
+ + PG+N M + PLPM+LL +++ + L + +
Sbjct: 503 ETIYGNGNMRISLPGTNC------MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 556
Query: 682 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 734
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 557 AHAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 614
Query: 735 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILS------ 785
+YR+ P YR Q L+ + + A +R +++ E+ + LI +
Sbjct: 615 SYRMHHIQPHYRVQ-----LLSHLHSL--AAVPQRNQNQLHLCVESTALRLITALGSSEV 667
Query: 786 QRDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIM 840
Q F + K S E +E LNR ++ LA +D+ + + +L+ IM
Sbjct: 668 QPQFTRFLSDPKSVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIM 726
Query: 841 ATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTY 900
+ + H W+ TL FP+ L+ + + ++ + V + + S + +
Sbjct: 727 SFTPHNWASHTLSCFPAPLQVFF----KQNNVPQESRFNLKKNVEEEYRKWKSMTNENEI 782
Query: 901 VKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLL 960
+ + P +LC +L++ ++IN RVL + +++ T D L+
Sbjct: 783 ITRFSVQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLV 837
Query: 961 HHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV--- 1016
+ E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 838 Y----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFI 891
Query: 1017 --ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------- 1067
+ LL + + RV + + PEHWL + + H+S+ ++Y
Sbjct: 892 IQLLLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFE 941
Query: 1068 -----------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFL 1109
P +F ++ R LPV ++++R +E S + +L
Sbjct: 942 GLAEQVNPPVQIQPQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLY 1001
Query: 1110 AYYPLRFSFVRDILAYFYGHL 1130
++ +++ + L Y+ HL
Sbjct: 1002 KFHDRPVTYLYNTLHYYERHL 1022
>gi|345479683|ref|XP_001601017.2| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Nasonia vitripennis]
Length = 1358
Score = 62.8 bits (151), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 132/671 (19%), Positives = 264/671 (39%), Gaps = 123/671 (18%)
Query: 654 PLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASI-----AMVETYTRLMLLAP--HSLF 706
PLPMS+L ++++ + L + + S A+VETY+RL++ +
Sbjct: 538 PLPMSILDSLTVHVKMSLIHSILTHVAKSASTKSNLPLPPALVETYSRLLVYTEIENIGI 597
Query: 707 RSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISA 761
+ SHL P++ G+ +L++ +YR+ P YR Q ++ + S
Sbjct: 598 KKFISHLL---PTVFKAHAWGILYTLLDMFSYRMHHIQPTYRVQI--------LSHLHSL 646
Query: 762 LKVKRGDHRVLRLA-ENLCMNLILS------QRDFFSLKREGKG-STEFTETLNRITVIA 813
V + + L L E+ + LI Q E K + +E LNR V+
Sbjct: 647 ASVPQTNQTQLHLCVESTALRLITGLGSAEVQPHLSKFLSEPKTLVSADSEELNRALVLT 706
Query: 814 LAI---IIKTRGIADAD-HVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDK 869
+A I T G + D + ++ + +L IM + H+W+E TLR FP L + +
Sbjct: 707 IARSMHITGTGGDTNRDVNSIWCKDLLNTIMQNTPHSWAEHTLRCFPPALSEFF----QQ 762
Query: 870 RGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPE 929
+ + QQ + V + S S + + + S P W ++ +
Sbjct: 763 NSIPKEEKQQIKKAVEEEYRNWASMSNENDIIAHF---SVPNSAPLFLCLIWKMIL-ETD 818
Query: 930 NINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVL 989
+N + ++L +++++ D ++ + G + K+ I+ +
Sbjct: 819 RVNPI-VYKILERIGARALSAHVRKFCDYIVFEVSSTAADGIYVN----KSVDAINHMIW 873
Query: 990 THELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPEHWLY 1044
+ ++ D L+L L R + + ++ + LL E + RV + + P+HW
Sbjct: 874 KYNIVTFDRLVLCLALRTLEGNEAQVCFFIIQLLLLKATEFRNRVVEF-VKENSPDHWKQ 932
Query: 1045 SGLFKRVELQKALGNHLSWKER-------------------YPTFFDDIAARLLPVIPLI 1085
S +K L H + E+ +P +F ++ R LPV+ ++
Sbjct: 933 SNWH-----EKHLAFHKKFPEKFAPEGMMDQSSGSPNQYQSFPAYFGNVCLRFLPVLDIV 987
Query: 1086 VYRLIENDAMDSADRVLATYSSFLAYYPLR-FSFVRDILAYF------YGHLPGKLIVRI 1138
++R +E + + VL + L + R +++ + L Y+ L +L+ I
Sbjct: 988 MHRYLEVPQVTKSLEVLLDHLGCLYRFHDRPVTYLYNTLHYYERKLRDQHFLKRRLVTAI 1047
Query: 1139 LNVFDLSKIP---FSESFPQHI--SSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSG 1193
L + P SE++ ++ S+ + P LDY+ L+ LV +
Sbjct: 1048 LGSLKEIRAPGWALSEAYQRYTARSTDDVKWQPELDYYVRLVQRLVETI----------- 1096
Query: 1194 STMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSA 1253
SG + F + +P +T L +E+++LPV+
Sbjct: 1097 -------------------SGRAQFPSTDWRFNEFPNPTAHT---LYVTCVELMALPVAP 1134
Query: 1254 SQIVSSLVQIV 1264
+ + ++L+ +V
Sbjct: 1135 NVVANNLLDVV 1145
>gi|158295231|ref|XP_316095.4| AGAP006046-PA [Anopheles gambiae str. PEST]
gi|157015936|gb|EAA11662.5| AGAP006046-PA [Anopheles gambiae str. PEST]
Length = 1450
Score = 62.8 bits (151), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 139/672 (20%), Positives = 272/672 (40%), Gaps = 104/672 (15%)
Query: 657 MSLLTGFSLNLCLKLALQMEDSIFGGQVVASIAMVETYTRLMLLAP-HSLFRSLFSHLAQ 715
MSL+ +++ +K A Q + SI G +A A+VETY+RL++ SL + L Q
Sbjct: 552 MSLIHSIVMHM-IKQA-QNKSSIPNGNNMAP-ALVETYSRLLVYTEIESL--GIKGFLGQ 606
Query: 716 RNPSLLAKV--GVTPLVLEIVNYRLLPLY-RYQGKTKTLMYDITKIISALKVKRG---DH 769
P + G+ +LE+ +YR+ ++ Y+ + T ++ + + +++ +
Sbjct: 607 LLPQVFKSQAWGILYTLLEMFSYRMHHIHSHYRVQLLTHLHSLASVPHTNQMQLHSCVES 666
Query: 770 RVLRLAENLCMNLILSQ--RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGIA-DA 826
LRL L + +Q R K G + +E LNR ++ LA + G D
Sbjct: 667 TALRLIIGLGSVEVQAQLSRYVSEPKPPGNIVSGESEELNRALILTLARSMHITGTGNDP 726
Query: 827 DHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVIN 886
+ + +L+ IM + H W + TL FP +L + + + + ++ Q + TV
Sbjct: 727 QSSAWCKDLLQNIMVNTPHAWPQHTLYCFPPVLNEFFM----QHNIPKESKQLLKKTVDE 782
Query: 887 QCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPE 946
+ S + + + + P +LC ++++ + I S ++L
Sbjct: 783 EYRNWASMTNENDIIAHFGMTVNPP--LFLCLVFKMIIET--DGI-SPVAYKILERIGAR 837
Query: 947 EVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDR 1006
+++++ M D LL + H + K I+ + + ++ +D L+L LI R
Sbjct: 838 ALSTHLRKMCDYLLFEVANSGGGAH-----VNKCVDTINDMIWKYNIITIDRLVLCLILR 892
Query: 1007 DDDPHALR-----IVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHL 1061
D + + I + LL E + RV+ + + PEHW + +R L H
Sbjct: 893 TLDGNEAQVSFYIIQLLLLKTTEFRNRVQEF-ITINSPEHWKQNNWHER-----HLAFHQ 946
Query: 1062 SWKERY-----------PTFFDDIAARLLPVIPLIVYRLIE--NDAMDSADRVLATYSSF 1108
+ E++ P +F ++ R LPV+ +IV+R +E + D +L S
Sbjct: 947 KFPEKFAPDESVSHPSLPVYFGNVCLRFLPVLDIIVHRYLEVPTQLSKTLDVILDHLGSL 1006
Query: 1109 LAYYPLRFSFVRDILAYFYGHLPGK---------LIVRILNVFDLSKIPFSESFPQHI-- 1157
++ +++ + L Y+ L + +V L +E++ ++
Sbjct: 1007 YKFHDRPITYLYNTLHYYERKLRDRPQLKKRLVGTVVGSLKDVRPENWALTEAYQAYMMT 1066
Query: 1158 -SSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPS 1216
S N P L Y+ L+ + TMD
Sbjct: 1067 KESDNVNWVPELSYYINLV--------------RRMQDTMDG-----------------K 1095
Query: 1217 NVSEGRK-EFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQPTLIQTS 1275
N+ G F + +P + L +E+L LPV S + +S++ ++V P +
Sbjct: 1096 NIFAGTDWRFNEFPNPPAHA---LYVTCVELLGLPVGPSVVANSIIDVLVKGYPVV---P 1149
Query: 1276 NGP-YGASNSVG 1286
NG + +N++G
Sbjct: 1150 NGVIHNWANTIG 1161
>gi|158706149|sp|Q5RIW8.2|MED23_DANRE RecName: Full=Mediator of RNA polymerase II transcription subunit 23;
AltName: Full=Cofactor required for Sp1 transcriptional
activation subunit 3; Short=CRSP complex subunit 3;
AltName: Full=Mediator complex subunit 23
Length = 1376
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 184/883 (20%), Positives = 341/883 (38%), Gaps = 146/883 (16%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 515 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 571
D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 390 G-DFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 440
Query: 572 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETV 622
+LQ K E+ +Q + + M D + + T ++ P V
Sbjct: 441 SKLQIPIPHSLKLHHEFLQQSLRNKSL----PMTDYKIALLCNAYSTNSECFTLPMGVLV 496
Query: 623 MNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 681
+ + PG+N M V PLPM+LL +++ + L + +
Sbjct: 497 ETIYGNGSMRITLPGTNC------MASGSVTPLPMNLLDSLTVHAKMSLIHSIATRVIKL 550
Query: 682 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 734
+ + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 551 AHAKSSLALAPALVETYSRLLVYMEIESL--GIKGFISQLLPNVFKSHAWGILHTLLEMF 608
Query: 735 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLA-ENLCMNLILS----- 785
+YR+ P YR Q ++ + S V + + L L E+ + LI +
Sbjct: 609 SYRMHHIQPHYRVQL--------LSHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSE 660
Query: 786 -QRDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQI 839
Q F + K S E +E LNR ++ LA +D+ + + +L+ I
Sbjct: 661 VQPQFTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTI 719
Query: 840 MATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPT 899
M + H W+ TL FP+ L+ + + ++ + V + + S + +
Sbjct: 720 MNFTPHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNEND 775
Query: 900 YVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVL 959
+ + P +LC +L++ ++IN RVL + +++ T D L
Sbjct: 776 IITHFSMQGSPP--LFLCLLWKMLLET--DHINQIG-FRVLERIGARALVAHVRTFADFL 830
Query: 960 LHHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-- 1016
++ E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 831 VY----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYF 884
Query: 1017 ---ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLF-KRVELQKALGNHLSWK-------- 1064
+ LL + + RV + + PEHWL S K + K L ++
Sbjct: 885 IIQLLLLKPNDFRNRVSDF-VKENAPEHWLQSDWHTKHMTYHKKYPEKLYFEGLAEQVNP 943
Query: 1065 ------ERYPTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
+ P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 944 PIQLQSQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1003
Query: 1118 FVRDILAYFYGH------LPGKLIVRILNVFDLSKIP---FSESFPQ--HISSSNPVMCP 1166
++ + L Y+ H L KL+ I++ ++ P SE++ + + + V P
Sbjct: 1004 YLYNTLHYYERHLRDRTNLKRKLVHAIMSSLKDNRTPGWCLSETYLKCGMNAREDNVWIP 1063
Query: 1167 PLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFY 1226
Y+ L+ LV+ + KSP GP + R F
Sbjct: 1064 DDTYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCDWR--FN 1095
Query: 1227 QNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
+ +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1096 EFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1135
>gi|395816457|ref|XP_003781718.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Otolemur garnettii]
Length = 1370
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 152/737 (20%), Positives = 292/737 (39%), Gaps = 122/737 (16%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 339 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 393
Query: 517 DSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
D V +L + E C D N PQS F +C IW ++ + + +N +
Sbjct: 394 DFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 445
Query: 574 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 628
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 446 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 495
Query: 629 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 681
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 496 GALVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 555
Query: 682 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 736
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 556 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 613
Query: 737 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 787
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 614 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 668
Query: 788 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 844
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 669 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 727
Query: 845 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 904
H W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 728 HNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNESDIITHF 783
Query: 905 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
+ S P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 784 VQSSPP---LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY--- 834
Query: 965 VELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----IT 1018
E Q L C I + V + ++ LD L+L L R + + ++ +
Sbjct: 835 -EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLL 891
Query: 1019 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------- 1067
LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 892 LLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAE 941
Query: 1068 -------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYP 1113
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 942 QVEPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHD 1001
Query: 1114 LRFSFVRDILAYFYGHL 1130
+++ + L Y+ HL
Sbjct: 1002 RPVTYLYNTLHYYEMHL 1018
>gi|363731983|ref|XP_424537.3| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Gallus gallus]
Length = 1383
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 154/741 (20%), Positives = 291/741 (39%), Gaps = 120/741 (16%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 344 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 402
Query: 515 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 571
+D V +L + E C D N PQS F +C IW ++ + + + +N
Sbjct: 403 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAHSDN 453
Query: 572 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETV 622
+LQ K E+ +Q + + M+D + + T ++ P V
Sbjct: 454 SKLQIPIPHSLKHHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSECFTLPMGVLV 509
Query: 623 MNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 681
+ + PG+N M + PLPM+LL +++ + L + +
Sbjct: 510 ETIYGNGNMRISLPGTNC------MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 563
Query: 682 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 734
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 564 AHAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 621
Query: 735 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILS------ 785
+YR+ P YR Q L+ + + A +R +++ E+ + LI +
Sbjct: 622 SYRMHHIQPHYRVQ-----LLSHLHSL--AAVPQRNQNQLHLCVESTALRLITALGSSEV 674
Query: 786 QRDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIM 840
Q F + K S E +E LNR ++ LA +D+ + + +L+ IM
Sbjct: 675 QPQFTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIM 733
Query: 841 ATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTY 900
+ + H W+ TL FP+ L+ + + ++ + V + + S + +
Sbjct: 734 SFTPHNWASHTLSCFPAPLQVFF----KQNNVPQESRFNLKKNVEEEYRKWKSMTNENEI 789
Query: 901 VKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLL 960
+ + P +LC +L++ ++IN RVL + +++ T D L+
Sbjct: 790 ITRFSVQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLV 844
Query: 961 HHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV--- 1016
+ E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 845 Y----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFI 898
Query: 1017 --ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------- 1067
+ LL + + RV + + PEHWL + + H+S+ ++Y
Sbjct: 899 IQLLLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFE 948
Query: 1068 -----------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFL 1109
P +F ++ R LPV ++++R +E S + +L
Sbjct: 949 GLAEQVNPPVQIQPQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLY 1008
Query: 1110 AYYPLRFSFVRDILAYFYGHL 1130
++ +++ + L Y+ HL
Sbjct: 1009 KFHDRPVTYLYNTLHYYERHL 1029
>gi|350420608|ref|XP_003492564.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Bombus impatiens]
Length = 1355
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 142/723 (19%), Positives = 281/723 (38%), Gaps = 119/723 (16%)
Query: 654 PLPMSLLTGFSLNLCLKLALQMEDSIFGG-----QVVASIAMVETYTRLMLLAP-HSLFR 707
PL MS+L +++ + L + + + + A+VETY+RL++ SL
Sbjct: 538 PLSMSILDSLTVHSKMSLIHSIVTHVIKSAQSKSNMALAPALVETYSRLLVYTEIESLGI 597
Query: 708 SLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISAL 762
F ++Q P++ G +LE+ +YR+ P YR Q L+ + + +
Sbjct: 598 KGF--ISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQ-----LLSHLHSLAAVP 650
Query: 763 KVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 816
+ + + LRL L + Q F + + S E +E LNR V+ LA
Sbjct: 651 QTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAE-SEELNRALVLTLAR 709
Query: 817 IIKTRGIADADHV-LYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 875
+ G H + + +L IM + H+W+ TL+ FP +L + + + +
Sbjct: 710 SMHVTGTGSDSHSGTWCKELLNTIMQNTPHSWANHTLQCFPPVLSEFF----QQNSVPKE 765
Query: 876 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSAN 935
QQ + V + S S + + + P +LC I+ + + S
Sbjct: 766 NKQQIKKAVEEEYRNWASMSNENDIIAHFSVPGTPP--LFLCLLWKIIFET---DRISPI 820
Query: 936 LLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLP 995
++L +++++ D L+ + H + K ++ + + ++
Sbjct: 821 AYKILERIGARALSAHLRKFCDYLVFEFANSVGGQH-----VNKCVDTVNDMIWKYNIVT 875
Query: 996 LDILLLALIDR-----DDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR 1050
+D L+L L+ R D I + LL EL+ R + + + PEHW S
Sbjct: 876 IDRLILCLVLRTHEGSDAQVCFFIIQLLLLKAIELRNRTQEF-VKENSPEHWKQSNWH-- 932
Query: 1051 VELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIE 1091
+K L H + E++ P +F ++ R LPV ++V+R +E
Sbjct: 933 ---EKHLAFHRKFPEKFAPEGIMEQTSGGPSQYQSLPVYFGNVCLRFLPVFDIVVHRYLE 989
Query: 1092 NDAM-DSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRILNVFDL 1144
A+ S + +L ++ +++ + L Y+ L +L+ +L
Sbjct: 990 IPAVSKSLETLLEHLGCLYKFHDRPVTYLYNTLHYYERKLRDRPPLKRRLVAAVLGSLKE 1049
Query: 1145 SKIP---FSESFPQHISSSNP---VMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA 1198
+ P SE++ +++ S P LDY+ L+ +V
Sbjct: 1050 IRAPGWALSEAYQMYMTRSTDDVVTWMPELDYYIRLVRRIVE------------------ 1091
Query: 1199 SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVS 1258
+ SG ++ F + +P + L +E++++PV+ + + +
Sbjct: 1092 ------------TMSGTAHFPATDWRFNEFPNPAAHA---LYVTCVELMAVPVAPNIVAN 1136
Query: 1259 SLVQIVVNIQPTLIQTSNGPYGASNSVG-QGSVLPTSPSGGSTDSLGASRSTPSVSGINT 1317
SL+ +V + + S+ + N VG + LP D L A+ S+P ++ N
Sbjct: 1137 SLLDVVA--KGYTVIPSDEIHLWINCVGLLLAALPECYWSALHDRLVATISSPGLANWNY 1194
Query: 1318 SSF 1320
S+
Sbjct: 1195 SNL 1197
>gi|363731985|ref|XP_003641044.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Gallus gallus]
Length = 1377
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 153/739 (20%), Positives = 294/739 (39%), Gaps = 125/739 (16%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 343 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 397
Query: 517 DSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
D V +L + E C D N PQS F +C IW ++ + + + +N +
Sbjct: 398 DFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAHSDNSK 449
Query: 574 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETVMN 624
LQ K E+ +Q + + M+D + + T ++ P V
Sbjct: 450 LQIPIPHSLKHHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSECFTLPMGVLVET 505
Query: 625 WLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 681
+ + PG+N M + PLPM+LL +++ + L + +
Sbjct: 506 IYGNGNMRISLPGTNC------MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 559
Query: 682 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 736
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 560 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 617
Query: 737 RL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILS------QR 787
R+ P YR Q L+ + + A +R +++ E+ + LI + Q
Sbjct: 618 RMHHIQPHYRVQ-----LLSHLHSL--AAVPQRNQNQLHLCVESTALRLITALGSSEVQP 670
Query: 788 DFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMAT 842
F + K S E +E LNR ++ LA +D+ + + +L+ IM+
Sbjct: 671 QFTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSF 729
Query: 843 SQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVK 902
+ H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 730 TPHNWASHTLSCFPAPLQVFF----KQNNVPQESRFNLKKNVEEEYRKWKSMTNENEIIT 785
Query: 903 TYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 962
+ P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 786 RFSVQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY- 839
Query: 963 IHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV----- 1016
E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 840 ---EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQ 894
Query: 1017 ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------- 1067
+ LL + + RV + + PEHWL + + H+S+ ++Y
Sbjct: 895 LLLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFEGL 944
Query: 1068 ---------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAY 1111
P +F ++ R LPV ++++R +E S + +L +
Sbjct: 945 AEQVNPPVQIQPQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKF 1004
Query: 1112 YPLRFSFVRDILAYFYGHL 1130
+ +++ + L Y+ HL
Sbjct: 1005 HDRPVTYLYNTLHYYERHL 1023
>gi|357616355|gb|EHJ70151.1| hypothetical protein KGM_21736 [Danaus plexippus]
Length = 1335
Score = 62.4 bits (150), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 139/673 (20%), Positives = 266/673 (39%), Gaps = 136/673 (20%)
Query: 654 PLPMSLLTGFSLNLCLKL---------ALQMEDSIFGGQVVASIAMVETYTRLMLLAP-H 703
PL M +L +L+ + L L + G + + A+VETY+RL++
Sbjct: 525 PLSMCILDSLTLHCKMSLIHSIVTHVAKLAQNKTTIPGSNMMAPALVETYSRLLVYTEIE 584
Query: 704 SLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIIS 760
SL F + N G+ +L++ +YR+ P YR TL+ +I + +
Sbjct: 585 SLGIKGFINQLLPNVFKSHAWGILHNLLDMFSYRIHHIQPHYRV-----TLLSNINSLAA 639
Query: 761 ALKVKRGDHRVLRLA-ENLCMNLILS------QRDFFSLKREGKG----STEFTETLNRI 809
+ + L+L E+ + LI S Q + E K S+E +E LNR+
Sbjct: 640 ---YPQANQTQLQLCFESTALRLITSLGSSGVQLQMSRVVSEPKSCVVVSSE-SEELNRV 695
Query: 810 TVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDK 869
V+ LA I G + + + +L IM + H WS+ TL+ FP +L
Sbjct: 696 LVLTLARGIYMTGTGNDGAAV--KEILTTIMTNTPHMWSQHTLQCFPPVL---------- 743
Query: 870 RGLTIQAWQQAETTVINQCTQLLSPSADPTYVK--------TYLSH-SFPQHRQYLCAGA 920
++ + Q N+ QLL S + Y K +SH S P +LC
Sbjct: 744 ----VEFFSQNPAPKENK--QLLKKSVEEEYRKWTSMANDNDIISHFSVPGTPLFLCLLW 797
Query: 921 WILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKA 980
++ + + IN ++L +++++ D L+ + H + K
Sbjct: 798 KMIFETN--RINPIA-FKILERIGARALSAHLRKFCDYLVFEVTNPAGGPH-----INKC 849
Query: 981 CANISFFVLTHELLPLDILLLALI-----DRDDDPHALRIV-ITLLDRQELQQRVKLYCM 1034
I+ + + ++ +D L+L L+ D ++ L I+ + LL EL+ R + + +
Sbjct: 850 VDAINDIIWKYNIVTIDRLVLCLVLRPNPDGNESQVCLYIIQLLLLKGSELRNRAQDF-V 908
Query: 1035 NRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-------------PTFFDDIAARLLPV 1081
PEHW + ++R H + E++ P + ++ R +PV
Sbjct: 909 KENSPEHWKQNNWYERHS-----AFHRKYPEKFAPEETSGAYGGPIPVYLSNVCLRFIPV 963
Query: 1082 IPLIVYRLIENDAMDSADRVLATYSSFLAYYPLR-FSFVRDILAYFYGH------LPGKL 1134
+ ++V+R +E + L + +L + R +F+ + L Y+ L KL
Sbjct: 964 LDIVVHRHLEIPQVSKNLEQLLEHLGYLYKFHDRPVTFLYNTLHYYESKLRDKPLLKRKL 1023
Query: 1135 IVRILNVFDLSKIP---FSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPALNYNSK 1191
+ +L + P +E+F + S P L+Y+ +L+ +V+ ++
Sbjct: 1024 VTAVLGSLKEVRAPGWATTEAFQTFLGSETEAWSPDLNYYLSLINRMVDTMM-------- 1075
Query: 1192 SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPV 1251
G S+ F + +P + L +E++SLPV
Sbjct: 1076 ----------------------GSSHFPNTDWRFNEYPNPSAH---CLYVTCVELMSLPV 1110
Query: 1252 SASQIVSSLVQIV 1264
+ + ++L+ +V
Sbjct: 1111 PPNTVGNNLLDVV 1123
>gi|456367244|ref|NP_001263983.1| mediator of RNA polymerase II transcription subunit 23 [Rattus
norvegicus]
Length = 1370
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 178/888 (20%), Positives = 345/888 (38%), Gaps = 165/888 (18%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 339 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 393
Query: 517 DSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
D V +L + E C D N PQS F +C IW ++ + + +N +
Sbjct: 394 DFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 445
Query: 574 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 628
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 446 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 495
Query: 629 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 681
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 496 GALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 555
Query: 682 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 736
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ ++
Sbjct: 556 TKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSH 613
Query: 737 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 787
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 614 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 668
Query: 788 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 844
F + S E +E LNR ++ LA +D+ + + +L+ IM +
Sbjct: 669 TRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMTFTP 727
Query: 845 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 904
H W+ TL FP+ L+ + + ++ + V + + S + + + +
Sbjct: 728 HNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQF 783
Query: 905 LSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHI 963
FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 784 SMQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVYEF 837
Query: 964 HVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----IT 1018
G L K ++ V + ++ LD L+L L R + + ++ +
Sbjct: 838 STS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLL 892
Query: 1019 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------- 1067
LL + + RV + + PEHWL S + H+S+ ++Y
Sbjct: 893 LLKPNDFRNRVSDF-VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGLAE 942
Query: 1068 -------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYP 1113
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 943 QVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHD 1002
Query: 1114 LRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSK---IPFSESFPQHISSS---N 1161
+++ + L Y+ HL KL+ I+ ++ S+++ +H ++ N
Sbjct: 1003 RPVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNAREDN 1062
Query: 1162 PVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEG 1221
P + P Y+ L+ LV+ + KSP GP +
Sbjct: 1063 PWV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCDW 1095
Query: 1222 RKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
R F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1096 R--FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1138
>gi|51591889|ref|NP_001003990.1| mediator of RNA polymerase II transcription subunit 23 [Danio rerio]
gi|51330079|gb|AAH80264.1| Cofactor required for Sp1 transcriptional activation, subunit 3
[Danio rerio]
Length = 1352
Score = 62.0 bits (149), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 182/882 (20%), Positives = 340/882 (38%), Gaps = 144/882 (16%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 307 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 365
Query: 515 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 571
D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 366 G-DFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 416
Query: 572 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETV 622
+LQ K E+ +Q + + M D + + T ++ P V
Sbjct: 417 SKLQIPIPHSLKLHHEFLQQSLRNKSL----PMTDYKIALLCNAYSTNSECFTLPMGVLV 472
Query: 623 MNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 681
+ + PG+N M V PLPM+LL +++ + L + +
Sbjct: 473 ETIYGNGSMRITLPGTNC------MASGSVTPLPMNLLDSLTVHAKMSLIHSIATRVIKL 526
Query: 682 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 734
+ + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 527 AHAKSSLALAPALVETYSRLLVYMEIESL--GIKGFISQLLPNVFKSHAWGILHTLLEMF 584
Query: 735 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLA-ENLCMNLILS----- 785
+YR+ P YR Q ++ + S V + + L L E+ + LI +
Sbjct: 585 SYRMHHIQPHYRVQL--------LSHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSE 636
Query: 786 -QRDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQI 839
Q F + K S E +E LNR ++ LA +D+ + + +L+ I
Sbjct: 637 VQPQFTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTI 695
Query: 840 MATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPT 899
M + H W+ TL FP+ L+ + + ++ + V + + S + +
Sbjct: 696 MNFTPHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNEND 751
Query: 900 YVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVL 959
+ + P +LC +L++ ++IN RVL + +++ T D L
Sbjct: 752 IITHFSMQGSPP--LFLCLLWKMLLET--DHINQIG-FRVLERIGARALVAHVRTFADFL 806
Query: 960 LHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV--- 1016
++ G L K ++ V + ++ LD L+L L R + + ++
Sbjct: 807 VYEFSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFI 861
Query: 1017 --ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLF-KRVELQKALGNHLSWK--------- 1064
+ LL + + RV + + PEHWL S K + K L ++
Sbjct: 862 IQLLLLKPNDFRNRVSDF-VKENAPEHWLQSDWHTKHMTYHKKYPEKLYFEGLAEQVNPP 920
Query: 1065 -----ERYPTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSF 1118
+ P +F ++ R LPV ++++R +E S + +L ++ ++
Sbjct: 921 IQLQSQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTY 980
Query: 1119 VRDILAYFYGH------LPGKLIVRILNVFDLSKIP---FSESFPQ--HISSSNPVMCPP 1167
+ + L Y+ H L KL+ I++ ++ P SE++ + + + V P
Sbjct: 981 LYNTLHYYERHLRDRTNLKRKLVHAIMSSLKDNRTPGWCLSETYLKCGMNAREDNVWIPD 1040
Query: 1168 LDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQ 1227
Y+ L+ LV+ + KSP GP + R F +
Sbjct: 1041 DTYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCDWR--FNE 1072
Query: 1228 NQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
+P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1073 FPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1111
>gi|158706146|sp|Q5EB59.2|MED23_RAT RecName: Full=Mediator of RNA polymerase II transcription subunit 23;
AltName: Full=Cofactor required for Sp1 transcriptional
activation subunit 3; Short=CRSP complex subunit 3;
AltName: Full=Mediator complex subunit 23
Length = 1367
Score = 61.6 bits (148), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 178/888 (20%), Positives = 345/888 (38%), Gaps = 165/888 (18%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
D V +L + E C D N PQS F +C IW ++ + + +N +
Sbjct: 391 DFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 574 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 628
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 492
Query: 629 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 681
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 493 GALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 552
Query: 682 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 736
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ ++
Sbjct: 553 TKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSH 610
Query: 737 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 787
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 611 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 665
Query: 788 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 844
F + S E +E LNR ++ LA +D+ + + +L+ IM +
Sbjct: 666 TRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMTFTP 724
Query: 845 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 904
H W+ TL FP+ L+ + + ++ + V + + S + + + +
Sbjct: 725 HNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQF 780
Query: 905 LSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHI 963
FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 781 SMQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVYEF 834
Query: 964 HVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----IT 1018
G L K ++ V + ++ LD L+L L R + + ++ +
Sbjct: 835 STS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLL 889
Query: 1019 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------- 1067
LL + + RV + + PEHWL S + H+S+ ++Y
Sbjct: 890 LLKPNDFRNRVSDF-VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGLAE 939
Query: 1068 -------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYP 1113
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 940 QVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHD 999
Query: 1114 LRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSK---IPFSESFPQHISSS---N 1161
+++ + L Y+ HL KL+ I+ ++ S+++ +H ++ N
Sbjct: 1000 RPVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNAREDN 1059
Query: 1162 PVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEG 1221
P + P Y+ L+ LV+ + KSP GP +
Sbjct: 1060 PWV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCDW 1092
Query: 1222 RKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
R F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1093 R--FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1135
>gi|344247416|gb|EGW03520.1| Mediator of RNA polymerase II transcription subunit 23 [Cricetulus
griseus]
Length = 1367
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 178/887 (20%), Positives = 343/887 (38%), Gaps = 163/887 (18%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLNNE 572
D V +L + E C D N PQS F +C IW LN + +N
Sbjct: 391 DFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNDDSNL 443
Query: 573 QL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 629
Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 444 QIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 630 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 681
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRVPLPGTSCLASASITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 682 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 737
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSNAWGILHTLLEMFSYR 611
Query: 738 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 788
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 789 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 845
F + S E +E LNR ++ LA +D+ + + +L+ IM + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFTPH 725
Query: 846 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 905
W+ TL FP+ L+ + + ++ + V + + S + + + +
Sbjct: 726 NWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQFS 781
Query: 906 SHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
FP +LC +L++ H I RVL + +++ T D L++
Sbjct: 782 VQGFPP--LFLCLLWKMLLETDHISQIG----YRVLERIGARALVAHVRTFADFLVYEFS 835
Query: 965 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1019
G L K ++ V + ++ LD L+L L R + + ++ + L
Sbjct: 836 TS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 890
Query: 1020 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1067
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 891 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 940
Query: 1068 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1114
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 941 VDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1000
Query: 1115 RFSFVRDILAYF------YGHLPGKLIVRILNVFDLSK---IPFSESFPQHISSS---NP 1162
+++ + L Y+ HL KL+ I+ ++ S+++ +H ++ NP
Sbjct: 1001 PVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNAREDNP 1060
Query: 1163 VMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGR 1222
+ P Y+ L+ LV+ + KSP GP + R
Sbjct: 1061 WV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCDWR 1093
Query: 1223 KEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1094 --FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1135
>gi|354502126|ref|XP_003513138.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Cricetulus griseus]
Length = 1376
Score = 61.6 bits (148), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 179/889 (20%), Positives = 340/889 (38%), Gaps = 158/889 (17%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 340 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 398
Query: 515 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLN 570
+D V +L + E C D N PQS F +C IW LN + +
Sbjct: 399 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNDDS 450
Query: 571 NEQL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLS 627
N Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 451 NLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LP 500
Query: 628 SAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-- 681
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 501 MGALVETIYGNGIMRVPLPGTSCLASASITPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 560
Query: 682 ---GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 735
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 561 HAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSNAWGILHTLLEMFS 618
Query: 736 YRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ 786
YR+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 619 YRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQ 673
Query: 787 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATS 843
F + S E +E LNR ++ LA +D+ + + +L+ IM +
Sbjct: 674 FTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFT 732
Query: 844 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 903
H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 733 PHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQ 788
Query: 904 YLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 962
+ FP +LC +L++ H I RVL + +++ T D L++
Sbjct: 789 FSVQGFPP--LFLCLLWKMLLETDHISQIG----YRVLERIGARALVAHVRTFADFLVYE 842
Query: 963 IHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----I 1017
G L K ++ V + ++ LD L+L L R + + ++ +
Sbjct: 843 FSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQL 897
Query: 1018 TLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY---------- 1067
LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 898 LLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLA 947
Query: 1068 --------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYY 1112
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 948 EQVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFH 1007
Query: 1113 PLRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSK---IPFSESFPQHISSS--- 1160
+++ + L Y+ HL KL+ I+ ++ S+++ +H ++
Sbjct: 1008 DRPVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNARED 1067
Query: 1161 NPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSE 1220
NP + P Y+ L+ LV+ + KSP GP +
Sbjct: 1068 NPWV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCD 1100
Query: 1221 GRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
R F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1101 WR--FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1144
>gi|417406384|gb|JAA49852.1| Putative cofactor required for sp1 transcriptional activation subunit
3 [Desmodus rotundus]
Length = 1367
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 148/742 (19%), Positives = 293/742 (39%), Gaps = 118/742 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
D V +L + E C D N PQS F +C IW ++ + + +N +
Sbjct: 391 DFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 574 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 629
LQ + + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLNLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 630 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 681
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTSCLASASITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 682 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 737
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 738 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 788
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 789 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 845
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 846 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 905
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENNIITHFS 781
Query: 906 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 965
+ P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 NQGSP---LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 835
Query: 966 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1020
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 836 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 890
Query: 1021 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 891 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQV 940
Query: 1068 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1115
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 941 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1000
Query: 1116 FSFVRDILAYFYGHLPGKLIVR 1137
+++ + L Y+ HL + ++
Sbjct: 1001 VTYLYNTLHYYEKHLRDRTFLK 1022
>gi|354502128|ref|XP_003513139.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Cricetulus griseus]
Length = 1370
Score = 61.2 bits (147), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 178/887 (20%), Positives = 343/887 (38%), Gaps = 163/887 (18%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 339 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 393
Query: 517 DSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLNNE 572
D V +L + E C D N PQS F +C IW LN + +N
Sbjct: 394 DFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNDDSNL 446
Query: 573 QL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 629
Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 447 QIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPMG 496
Query: 630 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 681
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 497 ALVETIYGNGIMRVPLPGTSCLASASITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 556
Query: 682 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 737
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 557 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSNAWGILHTLLEMFSYR 614
Query: 738 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 788
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 615 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 669
Query: 789 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 845
F + S E +E LNR ++ LA +D+ + + +L+ IM + H
Sbjct: 670 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFTPH 728
Query: 846 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 905
W+ TL FP+ L+ + + ++ + V + + S + + + +
Sbjct: 729 NWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQFS 784
Query: 906 SHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
FP +LC +L++ H I RVL + +++ T D L++
Sbjct: 785 VQGFPP--LFLCLLWKMLLETDHISQIG----YRVLERIGARALVAHVRTFADFLVYEFS 838
Query: 965 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1019
G L K ++ V + ++ LD L+L L R + + ++ + L
Sbjct: 839 TS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 893
Query: 1020 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1067
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 894 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 943
Query: 1068 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1114
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 944 VDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1003
Query: 1115 RFSFVRDILAYF------YGHLPGKLIVRILNVFDLSK---IPFSESFPQHISSS---NP 1162
+++ + L Y+ HL KL+ I+ ++ S+++ +H ++ NP
Sbjct: 1004 PVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNAREDNP 1063
Query: 1163 VMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGR 1222
+ P Y+ L+ LV+ + KSP GP + R
Sbjct: 1064 WV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCDWR 1096
Query: 1223 KEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1097 --FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1138
>gi|355748903|gb|EHH53386.1| hypothetical protein EGM_14020 [Macaca fascicularis]
Length = 1368
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 175/873 (20%), Positives = 343/873 (39%), Gaps = 135/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 391 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 444
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 445 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 495
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 496 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 555
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 556 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 613
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 614 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 668
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 669 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 727
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 728 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 783
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 784 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 837
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 838 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 893
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+S+ ++Y
Sbjct: 894 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFEGLAEQVDP 943
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 944 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1003
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1004 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1058
Query: 1178 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 --NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA- 1104
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1105 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|449273995|gb|EMC83311.1| Mediator of RNA polymerase II transcription subunit 23, partial
[Columba livia]
Length = 1360
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 151/738 (20%), Positives = 292/738 (39%), Gaps = 123/738 (16%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 323 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 377
Query: 517 DSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
D V +L + E C D N PQS F +C IW ++ + + + +N +
Sbjct: 378 DFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAHSDNSK 429
Query: 574 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETVMN 624
LQ K E+ +Q + + M+D + + T ++ P V
Sbjct: 430 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSECFTLPMGVLVET 485
Query: 625 WLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 681
+ + PG+N M + PLPM+LL +++ + L + +
Sbjct: 486 IYGNGNMGISLPGTNC------MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 539
Query: 682 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 736
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 540 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 597
Query: 737 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 787
R+ P YR Q L+ ++ + + + + + LRL L + + Q
Sbjct: 598 RMHHIQPHYRVQ-----LLSNLHSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQPQF 652
Query: 788 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 844
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 653 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 711
Query: 845 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 904
H W+ TL FP+ L+ + + ++ + V + + S + +
Sbjct: 712 HNWASHTLSCFPAPLQVFF----KQNNVPQESRFNLKKNVEEEYRKWKSMNTE----NEI 763
Query: 905 LSHSFPQHRQ--YLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 962
+SH Q +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 764 ISHFSAQGSSPLFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYE 820
Query: 963 IHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----I 1017
G L K ++ V + ++ LD L+L L R + + ++ +
Sbjct: 821 FSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQL 875
Query: 1018 TLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY---------- 1067
LL + + RV + + PEHWL + + H+S+ ++Y
Sbjct: 876 LLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFEGLA 925
Query: 1068 --------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYY 1112
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 926 EQVNPPVQIQPQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFH 985
Query: 1113 PLRFSFVRDILAYFYGHL 1130
+++ + L Y+ HL
Sbjct: 986 DRPVTYLYNTLHYYELHL 1003
>gi|380800995|gb|AFE72373.1| mediator of RNA polymerase II transcription subunit 23 isoform a,
partial [Macaca mulatta]
Length = 1086
Score = 60.8 bits (146), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 153/743 (20%), Positives = 290/743 (39%), Gaps = 110/743 (14%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 49 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 107
Query: 515 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 108 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 160
Query: 574 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 629
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 161 LQIPIPHSLRLHHEFLQQSLRNKSLQ---MNDYKIALLCNAYSTNSE--CFT----LPMG 211
Query: 630 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 681
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 212 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 271
Query: 682 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 737
V + A+VETY+RL++ + SL F ++Q P++ G+ +LE+ +YR
Sbjct: 272 KSSVALAPALVETYSRLLVYMEIESLGIKGF--ISQLLPTVFKSHAWGILHTLLEMFSYR 329
Query: 738 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 788
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 330 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 384
Query: 789 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 845
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 385 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 443
Query: 846 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 905
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 444 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 499
Query: 906 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 965
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 500 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY---- 550
Query: 966 ELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1019
E Q L C I + V + ++ LD L+L L R + + ++ + L
Sbjct: 551 EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 608
Query: 1020 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1067
L + + RV + + PEHWL + + H+S+ ++Y
Sbjct: 609 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFEGLAEQ 658
Query: 1068 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1114
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 659 VDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 718
Query: 1115 RFSFVRDILAYFYGHLPGKLIVR 1137
+++ + L Y+ HL + ++
Sbjct: 719 PVTYLYNTLHYYEMHLRDRAFLK 741
>gi|387762821|ref|NP_001248408.1| mediator of RNA polymerase II transcription subunit 23 [Macaca
mulatta]
gi|383410605|gb|AFH28516.1| mediator of RNA polymerase II transcription subunit 23 isoform a
[Macaca mulatta]
gi|384943050|gb|AFI35130.1| mediator of RNA polymerase II transcription subunit 23 isoform a
[Macaca mulatta]
gi|387542358|gb|AFJ71806.1| mediator of RNA polymerase II transcription subunit 23 isoform a
[Macaca mulatta]
Length = 1368
Score = 60.5 bits (145), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 175/873 (20%), Positives = 343/873 (39%), Gaps = 135/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 391 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 444
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 445 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 495
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 496 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 555
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 556 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 613
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 614 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 668
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 669 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 727
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 728 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 783
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 784 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 837
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 838 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 893
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+S+ ++Y
Sbjct: 894 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFEGLAEQVDP 943
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 944 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1003
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1004 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1058
Query: 1178 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 --NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA- 1104
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1105 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|47219131|emb|CAG01794.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1398
Score = 60.5 bits (145), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 157/733 (21%), Positives = 289/733 (39%), Gaps = 150/733 (20%)
Query: 642 PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTR 696
P M V PLPM+LL +++ + L + + + + A+VETY+R
Sbjct: 518 PGTNCMASAAVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSIALAPALVETYSR 577
Query: 697 LML-LAPHSLFRSLFSHLAQRNPSLLA--KVGVTPLVLEIVNYRL---LPLYRYQGKTKT 750
L++ + SL + ++Q P++ G+ +LE+ +YR+ P YR Q
Sbjct: 578 LLVYMEIESL--GIKGFISQLLPNVFKCHAWGILHTLLEMFSYRMHHIQPHYRVQL---- 631
Query: 751 LMYDITKIISALKVKRGDHRVLRLA-ENLCMNLILS------QRDFFSLKREGKG--STE 801
++ + S V + + L L E+ + LI + Q F + K S E
Sbjct: 632 ----LSHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLSDPKTVLSAE 687
Query: 802 FTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSL 858
+E LNR ++ LA +D+ H + + +L+ IM + H W+ TL FP+
Sbjct: 688 -SEELNRALILTLARATHVTDFFTGSDSIHGTWCKDILQTIMNFTPHNWASHTLSCFPAP 746
Query: 859 LRDALIGRIDKRGL------------TIQAWQQAETTVINQCTQLLSPSADPTYVK---- 902
L+ L R + L QA+ + + V + L + + Y K
Sbjct: 747 LQVHLDSRQVRSDLPPPTDHYFPLVFCPQAFFK-QNNVPQESRFNLKKNVEEEYRKWKSM 805
Query: 903 ----TYLSHSFPQHRQ--YLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMV 956
++H Q +LC +L++ ++IN RVL + +++ T
Sbjct: 806 ANENDIITHFSMQGSPPLFLCLLWKMLLET--DHINQIG-FRVLERIGARALVAHVRTFA 862
Query: 957 DVLLHHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRD-------- 1007
D L++ E Q L C I + V + ++ LD L+L L+ R+
Sbjct: 863 DFLVY----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLVSRNGGEASPVC 916
Query: 1008 -DDP--------HALR-------------IVITLLDRQELQQRVKLYCMNRGPPEHWLYS 1045
+P A+R I + LL + + RV + + PEHWL S
Sbjct: 917 AKNPVTSSLLFLQAMRSHENNEAQVCYFIIQLLLLKPNDFRNRVNDF-VKENAPEHWLQS 975
Query: 1046 GLF-KRVELQKALGNHLSWK--------------ERYPTFFDDIAARLLPVIPLIVYRLI 1090
K + K L ++ + P +F ++ R LPV ++++R +
Sbjct: 976 DWHNKHMNYHKKYPEKLYFEGLAEQVSPPMQLQSQYLPIYFGNVCLRFLPVFDIVIHRFL 1035
Query: 1091 E-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYF------YGHLPGKLIVRILNVFD 1143
E S + +L S ++ +++ + L Y+ +L KL+ I++
Sbjct: 1036 ELLPVSKSLETLLDHLGSLYKFHDRPVTYLYNTLHYYERQLRDRTNLKRKLVHAIMSSLK 1095
Query: 1144 LSKIP---FSESFPQHISSSNP----VMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTM 1196
++ P SE++ + NP V P Y+ L+ LV+N++ + S S +T+
Sbjct: 1096 DNRSPGWCLSETYLKF--GINPREDNVWIPDDTYYCKLIGRLVDNIL----HYSPSLNTL 1149
Query: 1197 DASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQI 1256
+ R P N EF +P + L +E+++L V +
Sbjct: 1150 THTHRCPF-----------PNCDWRFNEF---PNPAAHA---LHVTCVELMALAVPGKDV 1192
Query: 1257 VSSLVQIVVNIQP 1269
++L+ +V+ QP
Sbjct: 1193 GNALLNVVLKSQP 1205
>gi|391333244|ref|XP_003741029.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Metaseiulus occidentalis]
Length = 1407
Score = 60.5 bits (145), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 119/518 (22%), Positives = 217/518 (41%), Gaps = 74/518 (14%)
Query: 653 NPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLMLLAP-HSL- 705
PL M LL +++ + L + + Q + S A+VETY+RL++ SL
Sbjct: 508 QPLSMGLLDSLTVHTKMSLIHNIVSQVMQVMKNQQQPILSPALVETYSRLLVYNEIESLG 567
Query: 706 FRSLFSHLAQRNPSLLAKVGVTPL--VLEIVNYRL---LPLYRYQGKTKTLMYDITKIIS 760
+ SHL P++ + L +LE+ +YRL P YR Q L+ + + S
Sbjct: 568 IKGFMSHLL---PAVFRQQAWAILHTLLEMFSYRLHHIQPHYRVQ-----LLSHLHSLAS 619
Query: 761 ALKVKRGDHRV------LRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIAL 814
+ + V L+L +L + Q F + + S + +E LN+ V+ L
Sbjct: 620 VPQTNQTQLHVCMESTALKLITSLGSGEVQPQLSRFQAEPKPLLSAD-SEELNKALVLTL 678
Query: 815 AIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTI 874
A I G +++ + + + +L ++ + H+WS TL FPS L + +R
Sbjct: 679 ARAIHVTG-SESLSMAWCKDLLHAALSNTPHSWSSATLSCFPSSLAEFFRTNQAQR---- 733
Query: 875 QAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSA 934
+ Q + +V + + + S + V + P ++C +LM EN +
Sbjct: 734 ENKAQLKRSVEEEYRKWKTMSNENDIVAHFSQQGTPH--LFICLLWKMLM----ENDRVS 787
Query: 935 NL-LRVLREFSPEEVTSNIYTMVDVLLHHIH------VELQRGHSLQDLLFKACANISFF 987
L ++L ++ ++ T D L++ + V + +L DL++K
Sbjct: 788 PLAYKILDRLGSRALSLHLRTFADFLIYEVANCGPGPVVNKSIEALNDLIWKC------- 840
Query: 988 VLTHELLPLD--ILLLAL--IDRDDDPHALRIVITLLDR-QELQQRVKLYCMNRGPPEHW 1042
++PLD IL LAL + ++ I+ LL R E + RV + + PEHW
Sbjct: 841 ----YVVPLDRFILTLALRSFEGNESQVCFFIIQMLLIRFGEFKSRVTDF-VKENLPEHW 895
Query: 1043 LYSGLFKR-VELQKALGNHLSWK---------ERYPTFFDDIAARLLPVIPLIVYRLIEN 1092
S +R ++ Q+ W+ + P +F +I R LPV+ ++++R IE
Sbjct: 896 TQSDWHERHLQFQRRYPEKFYWENLPDSSQPHQYLPVYFGNICLRFLPVLDIVLHRFIEL 955
Query: 1093 DAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHL 1130
+ + + + L Y + + F L Y Y L
Sbjct: 956 PVNLPNNSI--SIETILDYIGMLYRFHDRPLTYLYNTL 991
>gi|6330569|dbj|BAA86530.1| KIAA1216 protein [Homo sapiens]
Length = 1421
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 175/875 (20%), Positives = 340/875 (38%), Gaps = 130/875 (14%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 384 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 442
Query: 515 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 443 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 495
Query: 574 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 629
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 496 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 546
Query: 630 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 681
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 547 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 606
Query: 682 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 737
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 607 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 664
Query: 738 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 788
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 665 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 719
Query: 789 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 845
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 720 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 778
Query: 846 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 905
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 779 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 834
Query: 906 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 965
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 835 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 889
Query: 966 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1020
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 890 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 944
Query: 1021 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 945 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQV 994
Query: 1068 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1115
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 995 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1054
Query: 1116 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1175
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1055 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1111
Query: 1176 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1234
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1112 ----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1156
Query: 1235 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1157 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1188
>gi|119568434|gb|EAW48049.1| cofactor required for Sp1 transcriptional activation, subunit 3,
130kDa, isoform CRA_a [Homo sapiens]
Length = 1369
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 172/873 (19%), Positives = 343/873 (39%), Gaps = 134/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 391 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 444
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 445 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 495
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 496 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 555
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 556 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 613
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 614 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 668
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 669 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 727
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 728 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 783
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 784 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 837
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 838 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 893
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 894 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 943
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 944 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1003
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1004 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1058
Query: 1178 LVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQS-GPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P Y + + +PM +S GP + R F + +P +
Sbjct: 1059 --NPWVPDDTYYCRLIGRLLC--------APMAGKSPGPFPNCDWR--FNEFPNPAAHA- 1105
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1106 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1136
>gi|4884564|gb|AAD31729.1|AF105332_1 vitamin D3 receptor interacting protein [Homo sapiens]
Length = 1368
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 175/864 (20%), Positives = 341/864 (39%), Gaps = 117/864 (13%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 391 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 444
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 445 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 495
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 496 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 555
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 556 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 613
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 614 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 668
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 669 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 727
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 728 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 783
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 784 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 837
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 838 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 893
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLF-KRVELQKALGNHLSWK--------------ERY 1067
+ + RV + + PEHWL + K + K L ++
Sbjct: 894 NDFRNRVSDF-VKENSPEHWLQNDWHTKHMNYHKKYPEKLYFEGLAEQVDPPCTDPVSYL 952
Query: 1068 PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYF 1126
P +F ++ R LPV ++++R +E S + +L ++ +++ + L Y+
Sbjct: 953 PIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYY 1012
Query: 1127 YGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLGLVNNVIPAL 1186
HL + ++ V + ++ PQ S+ + ++ N +P
Sbjct: 1013 EMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE------NPWVPDD 1065
Query: 1187 NYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIE 1245
Y + G +D KSP GP + R F + +P + L +E
Sbjct: 1066 TYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA---LHVTCVE 1111
Query: 1246 ILSLPVSASQIVSSLVQIVVNIQP 1269
+++L VS ++ ++L+ +V+ QP
Sbjct: 1112 LMALAVSGKEVGNALLNVVLKSQP 1135
>gi|344264206|ref|XP_003404184.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Loxodonta africana]
Length = 1368
Score = 60.1 bits (144), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 149/737 (20%), Positives = 287/737 (38%), Gaps = 112/737 (15%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 515 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 571
+D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 390 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 440
Query: 572 EQLQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLS 627
+LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 441 SKLQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LP 491
Query: 628 SAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-- 681
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 492 MGALVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 551
Query: 682 ---GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 735
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 552 HAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFS 609
Query: 736 YRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ 786
YR+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 610 YRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQ 664
Query: 787 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATS 843
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 665 FTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFT 723
Query: 844 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 903
H W+ TL FP L+ + + ++ + V + + S S + +
Sbjct: 724 PHNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITY 779
Query: 904 YLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHI 963
+ P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 780 FSKQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEF 834
Query: 964 HVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----IT 1018
G L K ++ V + ++ LD L+L L R + + ++ +
Sbjct: 835 STS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLL 889
Query: 1019 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------- 1067
LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 890 LLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAE 939
Query: 1068 -------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYP 1113
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 940 QVDPPIQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHD 999
Query: 1114 LRFSFVRDILAYFYGHL 1130
+++ + L Y+ HL
Sbjct: 1000 RPVTYLYNTLHYYEMHL 1016
>gi|403282058|ref|XP_003932481.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Saimiri boliviensis boliviensis]
Length = 1364
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 174/873 (19%), Positives = 344/873 (39%), Gaps = 135/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 391 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 444
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 445 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 495
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 496 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 555
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 556 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 613
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 614 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 668
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 669 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 727
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 728 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 783
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 784 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 837
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 838 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 893
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 894 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 943
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 944 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1003
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1004 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1058
Query: 1178 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P +Y + G +D KSP GP + R F + +P +
Sbjct: 1059 --NPWVPDDSYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA- 1104
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1105 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|403282062|ref|XP_003932483.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 3 [Saimiri boliviensis boliviensis]
Length = 1365
Score = 59.7 bits (143), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 174/873 (19%), Positives = 344/873 (39%), Gaps = 135/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 342 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 396
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 397 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 450
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 451 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 501
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 502 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 561
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 562 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 619
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 620 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 674
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 675 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 733
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 734 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 789
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 790 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 843
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 844 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 899
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 900 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 949
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 950 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1009
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1010 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1064
Query: 1178 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P +Y + G +D KSP GP + R F + +P +
Sbjct: 1065 --NPWVPDDSYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA- 1110
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1111 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1141
>gi|28558971|ref|NP_004821.2| mediator of RNA polymerase II transcription subunit 23 isoform a
[Homo sapiens]
gi|28558074|sp|Q9ULK4.2|MED23_HUMAN RecName: Full=Mediator of RNA polymerase II transcription subunit 23;
AltName: Full=Activator-recruited cofactor 130 kDa
component; Short=ARC130; AltName: Full=Cofactor required
for Sp1 transcriptional activation subunit 3; Short=CRSP
complex subunit 3; AltName: Full=Mediator complex subunit
23; AltName: Full=Protein sur-2 homolog; Short=hSur-2;
AltName: Full=Transcriptional coactivator CRSP130;
AltName: Full=Vitamin D3 receptor-interacting protein
complex 130 kDa component; Short=DRIP130
gi|119568435|gb|EAW48050.1| cofactor required for Sp1 transcriptional activation, subunit 3,
130kDa, isoform CRA_b [Homo sapiens]
gi|168278829|dbj|BAG11294.1| cofactor required for Sp1 transcriptional activation, subunit 3
[synthetic construct]
gi|410212316|gb|JAA03377.1| mediator complex subunit 23 [Pan troglodytes]
gi|410255058|gb|JAA15496.1| mediator complex subunit 23 [Pan troglodytes]
gi|410297638|gb|JAA27419.1| mediator complex subunit 23 [Pan troglodytes]
gi|410336429|gb|JAA37161.1| mediator complex subunit 23 [Pan troglodytes]
Length = 1368
Score = 59.7 bits (143), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 174/873 (19%), Positives = 343/873 (39%), Gaps = 135/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 391 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 444
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 445 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 495
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 496 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 555
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 556 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 613
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 614 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 668
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 669 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 727
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 728 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 783
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 784 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 837
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 838 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 893
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 894 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 943
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 944 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1003
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1004 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1058
Query: 1178 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 --NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA- 1104
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1105 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|4826626|gb|AAD30202.1| mediator [Homo sapiens]
Length = 1364
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 176/873 (20%), Positives = 343/873 (39%), Gaps = 135/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 391 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 444
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S + + M+D + + T ++ C T L +
Sbjct: 445 IPIPHSLRLHHEFLQQSLRHKSL---QMNDYKIALLCNAYSTNSE--CVT----LPMGAL 495
Query: 632 TELFPGSN---LP-PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ LP P M + PLPM+LL +++ + L + +
Sbjct: 496 VETIYGNGIMRLPLPGTNCMASASITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 555
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 556 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 613
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 614 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 668
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 669 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 727
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 728 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 783
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 784 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 837
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 838 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 893
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 894 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 943
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 944 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1003
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1004 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1058
Query: 1178 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 --NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA- 1104
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1105 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|395455067|ref|NP_001257451.1| mediator of RNA polymerase II transcription subunit 23 isoform d
[Homo sapiens]
gi|332824958|ref|XP_003311535.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Pan troglodytes]
gi|397514891|ref|XP_003827704.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Pan paniscus]
gi|119568437|gb|EAW48052.1| cofactor required for Sp1 transcriptional activation, subunit 3,
130kDa, isoform CRA_d [Homo sapiens]
Length = 1364
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 174/873 (19%), Positives = 343/873 (39%), Gaps = 135/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 391 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 444
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 445 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 495
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 496 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 555
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 556 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 613
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 614 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 668
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 669 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 727
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 728 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 783
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 784 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 837
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 838 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 893
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 894 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 943
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 944 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1003
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1004 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1058
Query: 1178 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 --NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA- 1104
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1105 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|403282060|ref|XP_003932482.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Saimiri boliviensis boliviensis]
Length = 1359
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 175/875 (20%), Positives = 341/875 (38%), Gaps = 130/875 (14%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 515 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 574 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 629
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 630 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 681
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 682 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 737
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 738 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 788
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 789 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 845
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 846 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 905
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 906 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 965
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 836
Query: 966 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1020
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 837 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 891
Query: 1021 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 892 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQV 941
Query: 1068 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1115
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 942 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1001
Query: 1116 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1175
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1002 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1058
Query: 1176 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1234
N +P +Y + G +D KSP GP + R F + +P +
Sbjct: 1059 ----NPWVPDDSYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1103
Query: 1235 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1104 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|410212318|gb|JAA03378.1| mediator complex subunit 23 [Pan troglodytes]
Length = 1374
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 174/873 (19%), Positives = 343/873 (39%), Gaps = 135/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 342 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 396
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 397 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 450
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 451 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 501
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 502 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 561
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 562 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 619
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 620 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 674
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 675 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 733
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 734 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 789
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 790 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 843
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 844 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 899
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 900 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 949
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 950 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1009
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1010 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1064
Query: 1178 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1065 --NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA- 1110
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1111 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1141
>gi|426354561|ref|XP_004044727.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Gorilla gorilla gorilla]
Length = 1364
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 174/873 (19%), Positives = 343/873 (39%), Gaps = 135/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 391 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 444
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 445 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 495
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 496 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 555
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 556 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 613
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 614 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 668
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 669 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 727
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 728 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 783
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 784 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 837
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 838 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 893
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 894 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 943
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 944 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1003
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1004 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1058
Query: 1178 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 --NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA- 1104
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1105 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|297679146|ref|XP_002817405.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 3 [Pongo abelii]
Length = 1364
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 174/873 (19%), Positives = 343/873 (39%), Gaps = 135/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 391 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 444
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 445 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 495
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 496 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 555
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 556 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 613
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 614 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 668
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 669 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 727
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 728 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 783
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 784 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 837
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 838 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 893
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 894 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 943
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 944 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1003
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1004 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1058
Query: 1178 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 --NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA- 1104
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1105 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|334324519|ref|XP_003340532.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Monodelphis domestica]
Length = 1373
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 155/742 (20%), Positives = 288/742 (38%), Gaps = 122/742 (16%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 334 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 392
Query: 515 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 571
+D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 393 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 443
Query: 572 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETV 622
+LQ K E+ +Q + + M+D + + T ++ P V
Sbjct: 444 SKLQIPIPHSLKLHHEFLQQSLRNKNL----QMNDYKIALLCNAYSTNSECFTLPMGVLV 499
Query: 623 MNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 681
+ + PG N M + PLPM+LL +++ + L + +
Sbjct: 500 ETIYGNGNMRISLPGINC------MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 553
Query: 682 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 734
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 554 AHAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 611
Query: 735 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLA-ENLCMNLILS----- 785
+YR+ P YR Q ++ + S V + + L L E+ + LI +
Sbjct: 612 SYRMHHIQPHYRVQL--------LSHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSE 663
Query: 786 -QRDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQI 839
Q F + K S E +E LNR ++ LA +D+ + + +L+ I
Sbjct: 664 VQPQFTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTI 722
Query: 840 MATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPT 899
M+ + H W+ TL FP+ L+ + + ++ + V + + S S +
Sbjct: 723 MSFTPHNWASHTLSCFPAPLQ----AFFQQNNVPQESRFNLKKNVEEEYRKWKSMSNEND 778
Query: 900 YVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVL 959
+ + P +LC +L++ ++IN RVL + +++ T D L
Sbjct: 779 IITHFSMQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFL 833
Query: 960 LHHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-- 1016
++ E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 834 VY----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYF 887
Query: 1017 ---ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------ 1067
+ LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 888 IIQLLLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYF 937
Query: 1068 ------------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSF 1108
P +F ++ R LPV ++++R +E S + +L
Sbjct: 938 EGLAEQVNPPVQIQLPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGL 997
Query: 1109 LAYYPLRFSFVRDILAYFYGHL 1130
++ +++ + L Y+ HL
Sbjct: 998 YKFHDRPVTYLYNTLHYYERHL 1019
>gi|37360288|dbj|BAC98122.1| mKIAA1216 protein [Mus musculus]
Length = 1385
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 178/887 (20%), Positives = 342/887 (38%), Gaps = 163/887 (18%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 354 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 408
Query: 517 DSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLNNE 572
D V +L + E C D N PQS F +C IW LN + +
Sbjct: 409 DFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNGDSTL 461
Query: 573 QL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 629
Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 462 QIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPMG 511
Query: 630 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 681
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 512 ALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHT 571
Query: 682 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 737
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ ++R
Sbjct: 572 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSHR 629
Query: 738 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 788
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 630 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 684
Query: 789 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 845
F + S E +E LNR ++ LA +D+ + + +L+ IM + H
Sbjct: 685 RFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFTPH 743
Query: 846 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 905
W+ TL FP+ L+ + + ++ + V + + S + + + +
Sbjct: 744 NWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQFS 799
Query: 906 SHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 800 VQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVYEFS 853
Query: 965 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1019
G L K ++ V + ++ LD L+L L R + + ++ + L
Sbjct: 854 TS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 908
Query: 1020 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1067
L + + RV + + PEHWL S + H+S+ ++Y
Sbjct: 909 LKPNDFRNRVSDF-VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGLAEQ 958
Query: 1068 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1114
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 959 VDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1018
Query: 1115 RFSFVRDILAYF------YGHLPGKLIVRILNVFDLSK---IPFSESFPQHISSS---NP 1162
+++ + L Y+ HL KL+ I+ ++ S+++ +H ++ NP
Sbjct: 1019 PVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNAREDNP 1078
Query: 1163 VMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGR 1222
+ P Y+ L+ LV+ + KSP GP + R
Sbjct: 1079 WV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCDWR 1111
Query: 1223 KEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1112 --FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1153
>gi|332213306|ref|XP_003255760.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Nomascus leucogenys]
Length = 1364
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 174/873 (19%), Positives = 343/873 (39%), Gaps = 135/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 391 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 444
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 445 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 495
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 496 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 555
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 556 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 613
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 614 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 668
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 669 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 727
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 728 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 783
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 784 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 837
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 838 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 893
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 894 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 943
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 944 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1003
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1004 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1058
Query: 1178 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 --NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA- 1104
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1105 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|426354565|ref|XP_004044729.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 3 [Gorilla gorilla gorilla]
Length = 1365
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 174/873 (19%), Positives = 343/873 (39%), Gaps = 135/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 342 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 396
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 397 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 450
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 451 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 501
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 502 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 561
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 562 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 619
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 620 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 674
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 675 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 733
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 734 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 789
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 790 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 843
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 844 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 899
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 900 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 949
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 950 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1009
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1010 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1064
Query: 1178 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1065 --NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA- 1110
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1111 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1141
>gi|334324521|ref|XP_001380388.2| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Monodelphis domestica]
Length = 1379
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 155/742 (20%), Positives = 288/742 (38%), Gaps = 122/742 (16%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 340 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 398
Query: 515 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 571
+D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 399 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 449
Query: 572 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQ----PACETV 622
+LQ K E+ +Q + + M+D + + T ++ P V
Sbjct: 450 SKLQIPIPHSLKLHHEFLQQSLRNKNL----QMNDYKIALLCNAYSTNSECFTLPMGVLV 505
Query: 623 MNWLSSAGVTELFPGSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 681
+ + PG N M + PLPM+LL +++ + L + +
Sbjct: 506 ETIYGNGNMRISLPGINC------MASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKL 559
Query: 682 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 734
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 560 AHAKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 617
Query: 735 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLA-ENLCMNLILS----- 785
+YR+ P YR Q ++ + S V + + L L E+ + LI +
Sbjct: 618 SYRMHHIQPHYRVQL--------LSHLHSLAAVPQTNQNQLHLCVESTALRLITALGSSE 669
Query: 786 -QRDFFSLKREGKG--STEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQI 839
Q F + K S E +E LNR ++ LA +D+ + + +L+ I
Sbjct: 670 VQPQFTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTI 728
Query: 840 MATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPT 899
M+ + H W+ TL FP+ L+ + + ++ + V + + S S +
Sbjct: 729 MSFTPHNWASHTLSCFPAPLQ----AFFQQNNVPQESRFNLKKNVEEEYRKWKSMSNEND 784
Query: 900 YVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVL 959
+ + P +LC +L++ ++IN RVL + +++ T D L
Sbjct: 785 IITHFSMQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFL 839
Query: 960 LHHIHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-- 1016
++ E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 840 VY----EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYF 893
Query: 1017 ---ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------ 1067
+ LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 894 IIQLLLLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYF 943
Query: 1068 ------------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSF 1108
P +F ++ R LPV ++++R +E S + +L
Sbjct: 944 EGLAEQVNPPVQIQLPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGL 1003
Query: 1109 LAYYPLRFSFVRDILAYFYGHL 1130
++ +++ + L Y+ HL
Sbjct: 1004 YKFHDRPVTYLYNTLHYYERHL 1025
>gi|426354563|ref|XP_004044728.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Gorilla gorilla gorilla]
Length = 1359
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 174/873 (19%), Positives = 343/873 (39%), Gaps = 135/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 391 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 444
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 445 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 495
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 496 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 555
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 556 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 613
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 614 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 668
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 669 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 727
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 728 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 783
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 784 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 837
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 838 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 893
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 894 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 943
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 944 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1003
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1004 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1058
Query: 1178 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 --NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA- 1104
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1105 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|296199250|ref|XP_002747006.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Callithrix jacchus]
Length = 1365
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 174/873 (19%), Positives = 343/873 (39%), Gaps = 135/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 342 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 396
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 397 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 450
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 451 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 501
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 502 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 561
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 562 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 619
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 620 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 674
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 675 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 733
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 734 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 789
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 790 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 843
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 844 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 899
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 900 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 949
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 950 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1009
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1010 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1064
Query: 1178 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1065 --NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA- 1110
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1111 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1141
>gi|296199248|ref|XP_002747005.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Callithrix jacchus]
Length = 1359
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 174/873 (19%), Positives = 343/873 (39%), Gaps = 135/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 391 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 444
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 445 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 495
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 496 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 555
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 556 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 613
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 614 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 668
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 669 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 727
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 728 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 783
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 784 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 837
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 838 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 893
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 894 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 943
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 944 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1003
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1004 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1058
Query: 1178 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 --NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA- 1104
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1105 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|307173992|gb|EFN64710.1| Mediator of RNA polymerase II transcription subunit 23 [Camponotus
floridanus]
Length = 1357
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 128/666 (19%), Positives = 263/666 (39%), Gaps = 116/666 (17%)
Query: 654 PLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLMLLAP-HSLFR 707
PL MS+L +++ + L + + + + A+VETY+RL++ SL
Sbjct: 540 PLSMSILDSLTVHSKMSLIHSIVTHVIKLAQSKSNMALAPALVETYSRLLVYTEIESLGI 599
Query: 708 SLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISAL 762
F ++Q P++ G +LE+ +YR+ P YR Q L+ + + +
Sbjct: 600 KGF--ISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQ-----LLSHLHSLAAVP 652
Query: 763 KVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 816
+ + + LRL L + Q F + + S E +E LNR V+ LA
Sbjct: 653 QTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAE-SEELNRALVLTLAR 711
Query: 817 IIKTRGI-ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 875
+ G AD+ + + +L IM + H+W+ TL+ FP +L + + + +
Sbjct: 712 SMHVTGTGADSLSGTWCKELLNTIMQNTPHSWANHTLQCFPPVLSEFF----QQNSIPKE 767
Query: 876 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSAN 935
QQ V + S S + + + P +LC ++++ + S
Sbjct: 768 NKQQINKAVEEEYRNWSSMSNENDIIAHFSVPGTPP--LFLCVLWKMILKT---DCISPI 822
Query: 936 LLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLP 995
++L +++++ D L+ + H + K +I+ + + ++
Sbjct: 823 AYKILERIGARALSAHLRKFCDYLVFEFANSVAGQH-----VNKCVDSINDMIWKYNIVT 877
Query: 996 LDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR 1050
+D L+L L R + + ++ + LL E + R++ + + PEHW S
Sbjct: 878 IDRLILCLALRTQEGNEAQVCFFIIQLLLLKAAEFRNRLQEF-VKENSPEHWKQSNWH-- 934
Query: 1051 VELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIE 1091
+K L H + E++ P +F ++ R LPV ++V+R +E
Sbjct: 935 ---EKHLAFHRKFPEKFAPEGIMEQTSGGPSQYQSLPVYFGNVCLRFLPVFDIVVHRYLE 991
Query: 1092 -NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRILNVFDL 1144
+ S + +L ++ +++ + L Y+ L +L+ +L
Sbjct: 992 IPPVIKSLEILLEHLGCLYKFHDRPVTYLYNTLHYYERKLRDRPLLKRRLVSAVLGSLRE 1051
Query: 1145 SKIP---FSESFPQHISSSNP---VMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA 1198
+ P SE++ ++++ N P LDY+ L+ +V
Sbjct: 1052 IRAPGWALSEAYQKYMTRLNDDAVQWIPELDYYIRLVQRIVE------------------ 1093
Query: 1199 SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVS 1258
+ SG ++ F + +P + L +E+++LPV+A+ + +
Sbjct: 1094 ------------TMSGTAHFPATDWRFNEFPNPAAHA---LYVTCVELMALPVAANLVAN 1138
Query: 1259 SLVQIV 1264
SL+ +V
Sbjct: 1139 SLLDVV 1144
>gi|332213308|ref|XP_003255761.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Nomascus leucogenys]
Length = 1359
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 175/875 (20%), Positives = 340/875 (38%), Gaps = 130/875 (14%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 515 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 574 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 629
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 630 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 681
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 682 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 737
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 738 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 788
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 789 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 845
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 846 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 905
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 906 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 965
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 836
Query: 966 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1020
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 837 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 891
Query: 1021 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 892 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQV 941
Query: 1068 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1115
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 942 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1001
Query: 1116 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1175
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1002 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1058
Query: 1176 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1234
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 ----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1103
Query: 1235 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1104 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|297679144|ref|XP_002817404.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Pongo abelii]
Length = 1365
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 174/873 (19%), Positives = 343/873 (39%), Gaps = 135/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 342 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 396
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 397 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 450
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 451 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 501
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 502 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 561
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 562 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 619
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 620 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 674
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 675 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 733
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 734 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 789
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 790 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 843
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 844 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 899
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 900 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 949
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 950 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1009
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1010 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1064
Query: 1178 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1065 --NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA- 1110
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1111 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1141
>gi|395455064|ref|NP_001257450.1| mediator of RNA polymerase II transcription subunit 23 isoform c
[Homo sapiens]
gi|332824960|ref|XP_003311536.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Pan troglodytes]
gi|397514893|ref|XP_003827705.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Pan paniscus]
Length = 1359
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 175/875 (20%), Positives = 340/875 (38%), Gaps = 130/875 (14%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 515 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 574 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 629
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 630 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 681
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 682 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 737
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 738 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 788
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 789 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 845
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 846 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 905
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 906 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 965
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 836
Query: 966 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1020
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 837 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 891
Query: 1021 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 892 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQV 941
Query: 1068 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1115
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 942 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1001
Query: 1116 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1175
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1002 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1058
Query: 1176 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1234
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 ----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1103
Query: 1235 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1104 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|297679148|ref|XP_002817406.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 4 [Pongo abelii]
Length = 1359
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 175/875 (20%), Positives = 340/875 (38%), Gaps = 130/875 (14%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 515 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 574 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 629
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 630 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 681
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 682 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 737
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 738 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 788
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 789 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 845
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 846 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 905
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 906 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 965
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 836
Query: 966 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1020
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 837 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 891
Query: 1021 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 892 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQV 941
Query: 1068 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1115
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 942 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1001
Query: 1116 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1175
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1002 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1058
Query: 1176 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1234
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 ----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1103
Query: 1235 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1104 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|28558969|ref|NP_057063.2| mediator of RNA polymerase II transcription subunit 23 isoform b
[Homo sapiens]
gi|332824962|ref|XP_527503.3| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 3 [Pan troglodytes]
gi|397514895|ref|XP_003827706.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 3 [Pan paniscus]
gi|12053065|emb|CAB66710.1| hypothetical protein [Homo sapiens]
gi|117645964|emb|CAL38449.1| hypothetical protein [synthetic construct]
Length = 1365
Score = 59.3 bits (142), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 174/873 (19%), Positives = 343/873 (39%), Gaps = 135/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 342 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 396
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 397 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 450
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 451 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 501
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 502 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 561
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 562 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 619
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 620 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 674
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 675 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 733
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 734 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 789
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 790 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 843
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 844 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 899
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 900 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 949
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 950 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1009
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1010 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1064
Query: 1178 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1065 --NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA- 1110
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1111 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1141
>gi|296199254|ref|XP_002747007.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 3 [Callithrix jacchus]
Length = 1364
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 174/873 (19%), Positives = 343/873 (39%), Gaps = 135/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 391 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 444
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 445 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 495
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 496 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 555
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 556 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 613
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 614 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 668
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 669 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 727
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 728 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 783
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 784 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 837
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 838 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 893
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 894 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 943
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 944 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1003
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1004 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1058
Query: 1178 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 --NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA- 1104
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1105 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|332213310|ref|XP_003255762.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 3 [Nomascus leucogenys]
Length = 1365
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 174/873 (19%), Positives = 343/873 (39%), Gaps = 135/873 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 342 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 396
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 397 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 450
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 451 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 501
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 502 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 561
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 562 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 619
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 620 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 674
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 675 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 733
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 734 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 789
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 790 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 843
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 844 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 899
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 900 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 949
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 950 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 1009
Query: 1118 FVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLLG 1177
++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1010 YLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE---- 1064
Query: 1178 LVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQ 1236
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1065 --NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA- 1110
Query: 1237 LVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1111 --LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1141
>gi|38174459|gb|AAH60759.1| MED23 protein [Homo sapiens]
gi|190690205|gb|ACE86877.1| mediator complex subunit 23 protein [synthetic construct]
gi|190691581|gb|ACE87565.1| mediator complex subunit 23 protein [synthetic construct]
Length = 1359
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 175/875 (20%), Positives = 340/875 (38%), Gaps = 130/875 (14%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 331 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 389
Query: 515 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 390 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 442
Query: 574 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 629
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 443 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 630 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 681
+ E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 553
Query: 682 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 737
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 611
Query: 738 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 788
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 789 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 845
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 667 RFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPH 725
Query: 846 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 905
W+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 726 NWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFS 781
Query: 906 SHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHV 965
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 782 MQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFST 836
Query: 966 ELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLL 1020
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 837 S-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLL 891
Query: 1021 DRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 892 KPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQV 941
Query: 1068 -----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLR 1115
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 942 DPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRP 1001
Query: 1116 FSFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLL 1175
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1002 VTYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE-- 1058
Query: 1176 LGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTY 1234
N +P Y + G +D KSP GP + R F + +P +
Sbjct: 1059 ----NPWVPDDTYYCRLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAH 1103
Query: 1235 TQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS ++ ++L+ +V+ QP
Sbjct: 1104 A---LHVTCVELMALAVSGKEVGNALLNVVLKSQP 1135
>gi|348565446|ref|XP_003468514.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Cavia porcellus]
Length = 1377
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 183/887 (20%), Positives = 341/887 (38%), Gaps = 154/887 (17%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 340 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 398
Query: 515 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 399 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 451
Query: 574 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 628
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 452 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 501
Query: 629 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 681
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 502 GALVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 561
Query: 682 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 736
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 562 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 619
Query: 737 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 787
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 620 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 674
Query: 788 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 844
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 675 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 733
Query: 845 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 904
H W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 734 HNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNESDIITHF 789
Query: 905 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 790 SIQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY--- 841
Query: 965 VELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----IT 1018
E Q L C I + V + ++ LD L+L L R + + ++ +
Sbjct: 842 -EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLL 898
Query: 1019 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------- 1067
LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 899 LLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAE 948
Query: 1068 -------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYP 1113
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 949 QVDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHD 1008
Query: 1114 LRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNP----V 1163
+++ + L Y+ HL KL+ I+ ++ PQ S+ V
Sbjct: 1009 RPVTYLYNTLHYYERYLRNRDHLKRKLVHAIIG-------SLKDNRPQGWCLSDTYLKNV 1061
Query: 1164 MCPPLDYFATLLLGLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGR 1222
M P D N +P +Y K G +D KSP GP + R
Sbjct: 1062 MNPRED----------NPWVPDDSYYCKLIGRLVDTMA----GKSP-----GPFPNCDWR 1102
Query: 1223 KEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
F + +P + L +E+++L VS + ++L+ +V+ QP
Sbjct: 1103 --FNEFPNPAAHA---LHVTCVELMALAVSGKDVGNALLNVVLKSQP 1144
>gi|29748076|gb|AAH50916.1| Mediator complex subunit 23 [Mus musculus]
Length = 1367
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 178/887 (20%), Positives = 342/887 (38%), Gaps = 163/887 (18%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLNNE 572
D V +L + E C D N PQS F +C IW LN + +
Sbjct: 391 DFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNGDSTL 443
Query: 573 QL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 629
Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 444 QIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 630 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 681
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHT 553
Query: 682 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 737
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ ++R
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSHR 611
Query: 738 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 788
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 789 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 845
F + S E +E LNR ++ LA +D+ + + +L+ IM + H
Sbjct: 667 RFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFTPH 725
Query: 846 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 905
W+ TL FP+ L+ + + ++ + V + + S + + + +
Sbjct: 726 NWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQFS 781
Query: 906 SHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 782 VQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVYEFS 835
Query: 965 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1019
G L K ++ V + ++ LD L+L L R + + ++ + L
Sbjct: 836 TS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 890
Query: 1020 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1067
L + + RV + + PEHWL S + H+S+ ++Y
Sbjct: 891 LKPNDFRNRVSDF-VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGLAEQ 940
Query: 1068 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1114
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 941 VDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1000
Query: 1115 RFSFVRDILAYF------YGHLPGKLIVRILNVFDLSK---IPFSESFPQHISSS---NP 1162
+++ + L Y+ HL KL+ I+ ++ S+++ +H ++ NP
Sbjct: 1001 PVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNAREDNP 1060
Query: 1163 VMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGR 1222
+ P Y+ L+ LV+ + KSP GP + R
Sbjct: 1061 WV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCDWR 1093
Query: 1223 KEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1094 --FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1135
>gi|261878545|ref|NP_001159888.1| mediator of RNA polymerase II transcription subunit 23 isoform 1 [Mus
musculus]
Length = 1376
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 179/889 (20%), Positives = 339/889 (38%), Gaps = 158/889 (17%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 340 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 398
Query: 515 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLN 570
+D V +L + E C D N PQS F +C IW LN + +
Sbjct: 399 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNGDS 450
Query: 571 NEQL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLS 627
Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 451 TLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LP 500
Query: 628 SAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-- 681
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 501 MGALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 560
Query: 682 ---GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 735
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 561 HTKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFS 618
Query: 736 YRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ 786
+R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 619 HRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQ 673
Query: 787 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATS 843
F + S E +E LNR ++ LA +D+ + + +L+ IM +
Sbjct: 674 FTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFT 732
Query: 844 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 903
H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 733 PHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQ 788
Query: 904 YLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 962
+ FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 789 FSVQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVYE 842
Query: 963 IHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----I 1017
G L K ++ V + ++ LD L+L L R + + ++ +
Sbjct: 843 FSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQL 897
Query: 1018 TLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY---------- 1067
LL + + RV + + PEHWL S + H+S+ ++Y
Sbjct: 898 LLLKPNDFRNRVSDF-VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGLA 947
Query: 1068 --------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYY 1112
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 948 EQVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFH 1007
Query: 1113 PLRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSK---IPFSESFPQHISSS--- 1160
+++ + L Y+ HL KL+ I+ ++ S+++ +H ++
Sbjct: 1008 DRPVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNARED 1067
Query: 1161 NPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSE 1220
NP + P Y+ L+ LV+ + KSP GP +
Sbjct: 1068 NPWV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCD 1100
Query: 1221 GRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
R F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1101 WR--FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1144
>gi|261878547|ref|NP_081623.3| mediator of RNA polymerase II transcription subunit 23 isoform 2 [Mus
musculus]
Length = 1370
Score = 58.9 bits (141), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 181/890 (20%), Positives = 340/890 (38%), Gaps = 160/890 (17%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 334 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 392
Query: 515 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLN 570
+D V +L + E C D N PQS F +C IW LN + +
Sbjct: 393 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNGDS 444
Query: 571 NEQL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLS 627
Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 445 TLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LP 494
Query: 628 SAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-- 681
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 495 MGALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 554
Query: 682 ---GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 735
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 555 HTKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFS 612
Query: 736 YRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ 786
+R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 613 HRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQ 667
Query: 787 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATS 843
F + S E +E LNR ++ LA +D+ + + +L+ IM +
Sbjct: 668 FTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFT 726
Query: 844 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 903
H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 727 PHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQ 782
Query: 904 YLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 962
+ FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 783 FSVQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVY- 835
Query: 963 IHVELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV----- 1016
E Q L C I + V + ++ LD L+L L R + + ++
Sbjct: 836 ---EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQ 890
Query: 1017 ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------- 1067
+ LL + + RV + + PEHWL S + H+S+ ++Y
Sbjct: 891 LLLLKPNDFRNRVSDF-VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGL 940
Query: 1068 ---------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAY 1111
P +F ++ R LPV ++++R +E S + +L +
Sbjct: 941 AEQVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKF 1000
Query: 1112 YPLRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSK---IPFSESFPQHISSS-- 1160
+ +++ + L Y+ HL KL+ I+ ++ S+++ +H ++
Sbjct: 1001 HDRPVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNARE 1060
Query: 1161 -NPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVS 1219
NP + P Y+ L+ LV+ + KSP GP
Sbjct: 1061 DNPWV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNC 1093
Query: 1220 EGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
+ R F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1094 DWR--FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1138
>gi|194388184|dbj|BAG65476.1| unnamed protein product [Homo sapiens]
Length = 1009
Score = 58.9 bits (141), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 109/547 (19%), Positives = 218/547 (39%), Gaps = 84/547 (15%)
Query: 642 PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTR 696
P M + PLPM+LL +++ + L + + V + A+VETY+R
Sbjct: 151 PGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSVALAPALVETYSR 210
Query: 697 LML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKT 750
L++ + SL F ++Q P++ G+ +LE+ +YR+ P YR Q
Sbjct: 211 LLVYMEIESLGIKGF--ISQLLPTVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQ----- 263
Query: 751 LMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTE 804
L+ + + + + + + LRL L + + Q F + S E +E
Sbjct: 264 LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLSDPKTVLSAE-SE 322
Query: 805 TLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRD 861
LNR ++ LA +D+ + + +L+ IM+ + H W+ TL FP L+
Sbjct: 323 ELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNWASHTLSCFPGPLQ- 381
Query: 862 ALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAW 921
+ + ++ + V + + S S + + + P +LC
Sbjct: 382 ---AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQGSPP--LFLCLLWK 436
Query: 922 ILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKAC 981
+L++ ++IN RVL + +++ T D L++ E Q L C
Sbjct: 437 MLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY----EFSTSAGGQQL--NKC 487
Query: 982 ANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMN 1035
I + V + ++ LD L+L L R + + ++ + LL + + RV + +
Sbjct: 488 IEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDF-VK 546
Query: 1036 RGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------------------PTFF 1071
PEHWL + + H+++ ++Y P +F
Sbjct: 547 ENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPIYF 597
Query: 1072 DDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHL 1130
++ R LPV ++++R +E S + +L ++ +++ + L Y+ HL
Sbjct: 598 GNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMHL 657
Query: 1131 PGKLIVR 1137
+ ++
Sbjct: 658 RDRAFLK 664
>gi|158706145|sp|Q80YQ2.2|MED23_MOUSE RecName: Full=Mediator of RNA polymerase II transcription subunit 23;
AltName: Full=Cofactor required for Sp1 transcriptional
activation subunit 3; Short=CRSP complex subunit 3;
AltName: Full=Mediator complex subunit 23; AltName:
Full=Protein sur-2 homolog; Short=mSur-2
Length = 1367
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 178/887 (20%), Positives = 342/887 (38%), Gaps = 163/887 (18%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLNNE 572
D V +L + E C D N PQS F +C IW LN + +
Sbjct: 391 DFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNGDSTL 443
Query: 573 QL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 629
Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 444 QIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPMG 493
Query: 630 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG---- 681
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 494 ALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHT 553
Query: 682 -GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 737
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ ++R
Sbjct: 554 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSHR 611
Query: 738 L---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRD 788
+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 612 MHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFT 666
Query: 789 FFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQH 845
F + S E +E LNR ++ LA +D+ + + +L+ IM + H
Sbjct: 667 RFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFTPH 725
Query: 846 TWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYL 905
W+ TL FP+ L+ + + ++ + V + + S + + + +
Sbjct: 726 NWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQFS 781
Query: 906 SHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 782 VQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVYEFS 835
Query: 965 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1019
G L K ++ V + ++ LD L+L L R + + ++ + L
Sbjct: 836 TS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 890
Query: 1020 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1067
L + + RV + + PEHWL S + H+S+ ++Y
Sbjct: 891 LKPNDFRNRVSDF-VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGLAEQ 940
Query: 1068 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1114
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 941 VDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1000
Query: 1115 RFSFVRDILAYF------YGHLPGKLIVRILNVFDLSK---IPFSESFPQHISSS---NP 1162
+++ + L Y+ HL KL+ I+ ++ S+++ +H ++ NP
Sbjct: 1001 PVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNAREDNP 1060
Query: 1163 VMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGR 1222
+ P Y+ L+ LV+ + KSP GP + R
Sbjct: 1061 WV-PEDSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCDWR 1093
Query: 1223 KEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1094 --FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1135
>gi|148672842|gb|EDL04789.1| cofactor required for Sp1 transcriptional activation, subunit 3,
isoform CRA_a [Mus musculus]
gi|148672844|gb|EDL04791.1| cofactor required for Sp1 transcriptional activation, subunit 3,
isoform CRA_a [Mus musculus]
Length = 995
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 137/692 (19%), Positives = 271/692 (39%), Gaps = 130/692 (18%)
Query: 642 PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTR 696
P + V PLPM+LL +++ + L + + V + A+VETY+R
Sbjct: 138 PGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHTKSSVALAPALVETYSR 197
Query: 697 LML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKT 750
L++ + SL F ++Q P++ G+ +LE+ ++R+ P YR Q
Sbjct: 198 LLVYMEIESLGIKGF--ISQLLPTVFKSHAWGILHTLLEMFSHRMHHIQPHYRVQ----- 250
Query: 751 LMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTE 804
L+ + + + + + + LRL L + + Q F + S E +E
Sbjct: 251 LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLNDPKTVLSAE-SE 309
Query: 805 TLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRD 861
LNR ++ LA +D+ + + +L+ IM + H W+ TL FP+ L+
Sbjct: 310 ELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFTPHNWASHTLSCFPAPLQ- 368
Query: 862 ALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAW 921
+ + ++ + V + + S + + + + FP +LC
Sbjct: 369 ---AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQFSVQGFPP--LFLCLLWK 423
Query: 922 ILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKA 980
+L++ H I +VL + +++ T D L++ E Q L
Sbjct: 424 MLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVY----EFSTSAGGQQL--NK 473
Query: 981 CANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCM 1034
C I + V + ++ LD L+L L R + + ++ + LL + + RV + +
Sbjct: 474 CIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDF-V 532
Query: 1035 NRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------------------PTF 1070
PEHWL S + H+S+ ++Y P +
Sbjct: 533 KENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGLAEQVDPPVPIQSPYLPIY 583
Query: 1071 FDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYF--- 1126
F ++ R LPV ++++R +E S + +L ++ +++ + L Y+
Sbjct: 584 FGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMC 643
Query: 1127 ---YGHLPGKLIVRILNVFDLSK---IPFSESFPQHISSS---NPVMCPPLDYFATLLLG 1177
HL KL+ I+ ++ S+++ +H ++ NP + P Y+ L+
Sbjct: 644 LRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNAREDNPWV-PEDSYYCKLIGR 702
Query: 1178 LVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQL 1237
LV+ + KSP GP + R F + +P +
Sbjct: 703 LVDTMA---------------------GKSP-----GPFPNCDWR--FNEFPNPAAHA-- 732
Query: 1238 VLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L V + ++L+ +V+ QP
Sbjct: 733 -LHVTCVELMALAVPGKDVGNALLNVVLKSQP 763
>gi|395534930|ref|XP_003769486.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Sarcophilus harrisii]
Length = 1373
Score = 58.5 bits (140), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 109/542 (20%), Positives = 218/542 (40%), Gaps = 87/542 (16%)
Query: 642 PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTR 696
P M + PLPM+LL +++ + L + + V + A+VETY+R
Sbjct: 513 PGINCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSVALAPALVETYSR 572
Query: 697 LML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKT 750
L++ + SL + ++Q P++ G+ +LE+ +YR+ P YR Q
Sbjct: 573 LLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQL---- 626
Query: 751 LMYDITKIISALKVKRGDHRVLRLA-ENLCMNLILS------QRDFFSLKREGKG--STE 801
++ + S V + + L L E+ + LI + Q F + K S E
Sbjct: 627 ----LSHLHSLAAVSQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLSDPKTVLSAE 682
Query: 802 FTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSL 858
+E LNR ++ LA +D+ + + +L+ IM+ + H W+ TL FP+
Sbjct: 683 -SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNWASHTLSCFPAP 741
Query: 859 LRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCA 918
L+ + + ++ + V + + S + + + + S P +LC
Sbjct: 742 LQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFFSMQSPP-PLFLCL 796
Query: 919 GAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLF 978
+L++ ++IN RVL + +++ T D L++ G L
Sbjct: 797 LWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS-AGGQQLN---- 848
Query: 979 KACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYC 1033
K ++ V + ++ LD L+L L R + + ++ + LL + + RV +
Sbjct: 849 KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDF- 907
Query: 1034 MNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------------------PT 1069
+ PEHWL + + H+++ ++Y P
Sbjct: 908 VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVNPPVQIQLPYLPI 958
Query: 1070 FFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYG 1128
+F ++ R LPV ++++R +E S + +L ++ +++ + L Y+
Sbjct: 959 YFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEM 1018
Query: 1129 HL 1130
HL
Sbjct: 1019 HL 1020
>gi|440895838|gb|ELR47929.1| Mediator of RNA polymerase II transcription subunit 23 [Bos grunniens
mutus]
Length = 1374
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 176/881 (19%), Positives = 339/881 (38%), Gaps = 142/881 (16%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 337 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 395
Query: 515 NSDSRKVETTRKILSFHRE-DRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 396 -ADFLPVMKLFDLLYPEKEFIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 448
Query: 574 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 628
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 449 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 498
Query: 629 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 681
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 499 GALVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 558
Query: 682 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 736
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 559 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 616
Query: 737 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 787
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 617 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 671
Query: 788 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 844
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 672 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 730
Query: 845 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 904
H W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 731 HNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHF 786
Query: 905 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
+ P +LC +L++ ++IN RVL + ++ T D L++
Sbjct: 787 SAQRSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVVHVRTFADFLVYEFS 841
Query: 965 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1019
G L K ++ V + ++ LD L+L L R + + ++ + L
Sbjct: 842 TS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 896
Query: 1020 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1067
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 897 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 946
Query: 1068 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1114
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 947 VDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1006
Query: 1115 RFSFVRDILAYFYGHLPG------KLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPL 1168
+++ + L Y+ HL KL+ I+ ++ PQ S+ + +
Sbjct: 1007 PVTYLYNTLHYYEMHLRNRESLKRKLVHAIIG-------SLKDNRPQGWCLSDTYLKNAM 1059
Query: 1169 DYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQN 1228
+ N +P +Y K + A + KSP GP + R F +
Sbjct: 1060 NARED------NPWVPDDSYYCKLIGRLSAPMAG---KSP-----GPFPNCDWR--FNEF 1103
Query: 1229 QDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
+P + L +E+++L VS + ++L+ +V+ QP
Sbjct: 1104 PNPAAHA---LHVTCVELMALAVSGQDVGNALLNVVLKSQP 1141
>gi|281342638|gb|EFB18222.1| hypothetical protein PANDA_012141 [Ailuropoda melanoleuca]
Length = 1361
Score = 58.2 bits (139), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 174/879 (19%), Positives = 342/879 (38%), Gaps = 147/879 (16%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 329 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 383
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 384 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 437
Query: 576 -----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAG 630
K E+ +Q + + M+D + + T ++ C T L
Sbjct: 438 IPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPMGA 487
Query: 631 VTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG----- 681
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 488 LVETIYGNGIMRVPLPGTSCLASASITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAK 547
Query: 682 GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 548 SSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRM 605
Query: 739 ---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDF 789
P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 606 HHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTR 660
Query: 790 FSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHT 846
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 661 FLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHN 719
Query: 847 WSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLS 906
W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 720 WASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFSM 775
Query: 907 HSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVE 966
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 776 QGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS 830
Query: 967 LQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLD 1021
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 831 -AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLK 885
Query: 1022 RQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 886 PNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVD 935
Query: 1068 ----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRF 1116
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 936 PPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPV 995
Query: 1117 SFVRDILAYF------YGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDY 1170
+++ + L Y+ HL KL+ I+ ++ PQ S+ + ++
Sbjct: 996 TYLYNTLHYYEMHLRERPHLKRKLVHAIIG-------SLKDNRPQGWCLSDTYLKCGMNA 1048
Query: 1171 FATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQD 1230
N +P +Y + + A + KSP GP + R F + +
Sbjct: 1049 REE------NPWVPDDSYYCRLIGRLSAPMAG---KSP-----GPFPNCDWR--FNEFPN 1092
Query: 1231 PGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
P + L +E+++L VS + ++L+ +V+ QP
Sbjct: 1093 PAAHA---LHVTCVELMALAVSGEDVGNALLNVVLKSQP 1128
>gi|296484032|tpg|DAA26147.1| TPA: mediator complex subunit 23 [Bos taurus]
Length = 1151
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 151/737 (20%), Positives = 286/737 (38%), Gaps = 112/737 (15%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 114 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 172
Query: 515 NSDSRKVETTRKILSFHRE-DRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 173 -ADFLPVMKLFDLLYPEKEFIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 225
Query: 574 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 628
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 226 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 275
Query: 629 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 681
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 276 GALVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 335
Query: 682 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 736
V + A+VETY+RL++ + SL F ++Q P++ G+ +LE+ +Y
Sbjct: 336 AKSSVALAPALVETYSRLLVYMEIESLGIKGF--ISQLLPTVFKSHAWGILHTLLEMFSY 393
Query: 737 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 787
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 394 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 448
Query: 788 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 844
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 449 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 507
Query: 845 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 904
H W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 508 HNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHF 563
Query: 905 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
+ P +LC +L++ ++IN RVL + ++ T D L++
Sbjct: 564 SAQRSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVVHVRTFADFLVY--- 615
Query: 965 VELQRGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----IT 1018
E Q L C I + V + ++ LD L+L L R + + ++ +
Sbjct: 616 -EFSTSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLL 672
Query: 1019 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------- 1067
LL + + RV + + PEHWL + + H+++ ++Y
Sbjct: 673 LLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAE 722
Query: 1068 -------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYP 1113
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 723 QVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHD 782
Query: 1114 LRFSFVRDILAYFYGHL 1130
+++ + L Y+ HL
Sbjct: 783 RPVTYLYNTLHYYEMHL 799
>gi|291396968|ref|XP_002714865.1| PREDICTED: mediator complex subunit 23 [Oryctolagus cuniculus]
Length = 1377
Score = 57.8 bits (138), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 150/738 (20%), Positives = 292/738 (39%), Gaps = 109/738 (14%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 345 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 399
Query: 517 DSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
D V +L + E C D N PQS F +C IW ++ + + +N +
Sbjct: 400 DFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 451
Query: 574 LQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSA 629
LQ ++ + Q S ++ + M+D + + T ++ C T L
Sbjct: 452 LQIPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMG 502
Query: 630 GVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIF----- 680
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 503 ALVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHA 562
Query: 681 GGQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYR 737
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR
Sbjct: 563 KSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYR 620
Query: 738 L---LPLYRYQ--GKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDFFSL 792
+ P YR Q TL ++ L + + LRL L + + Q F
Sbjct: 621 MHHIQPHYRVQLLSHLHTLAAVPQTNLNQLHLCV-ESTALRLITALGSSEVQPQFTRFLS 679
Query: 793 KREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSE 849
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W+
Sbjct: 680 DPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNWAS 738
Query: 850 KTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSF 909
TL FP L+ + + ++ + V + + S S + + +
Sbjct: 739 HTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENEIITHFPVQGS 794
Query: 910 PQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQR 969
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 795 PP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS-AG 848
Query: 970 GHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQE 1024
G L K ++ V + ++ LD L+L L R + + ++ + LL +
Sbjct: 849 GQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPND 904
Query: 1025 LQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------------- 1067
+ RV + + PEHWL + + H+++ ++Y
Sbjct: 905 FRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDPPV 954
Query: 1068 -------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFV 1119
P +F ++ R LPV ++++R +E S + +L ++ +++
Sbjct: 955 QIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYL 1014
Query: 1120 RDILAYFYGHLPGKLIVR 1137
+ L Y+ HL + ++
Sbjct: 1015 YNTLHYYEVHLRQRAFLK 1032
>gi|338710793|ref|XP_001504341.3| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Equus caballus]
Length = 1368
Score = 57.8 bits (138), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 174/874 (19%), Positives = 342/874 (39%), Gaps = 137/874 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 391 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 444
Query: 576 -----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAG 630
K E+ +Q + + M+D + + T ++ C T L
Sbjct: 445 IPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPMGA 494
Query: 631 VTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG----- 681
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 495 LVETIYGNGIMRIPLPGMSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAK 554
Query: 682 GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 555 SSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRM 612
Query: 739 ---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDF 789
P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 613 HHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTR 667
Query: 790 FSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHT 846
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 668 FLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHN 726
Query: 847 WSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLS 906
W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 727 WASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFSM 782
Query: 907 HSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVE 966
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 783 QGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS 837
Query: 967 LQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLD 1021
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 838 -AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLK 892
Query: 1022 RQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 893 PNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVD 942
Query: 1068 ----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRF 1116
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 943 PPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPV 1002
Query: 1117 SFVRDILAYFYGHLPGKLIVRILNVFDLSKIPFSESFPQHISSSNPVMCPPLDYFATLLL 1176
+++ + L Y+ HL + ++ V + ++ PQ S+ + ++
Sbjct: 1003 TYLYNTLHYYEMHLRDRAFLKRKLVHAIIG-SLKDNRPQGWCLSDTYLKCAMNAREE--- 1058
Query: 1177 GLVNNVIPALNYNSK-SGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYT 1235
N +P +Y K G +D KSP GP + R F + +P +
Sbjct: 1059 ---NPWVPDDSYYCKLIGRLVDTMA----GKSP-----GPFPNCDWR--FNEFPNPAAHA 1104
Query: 1236 QLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L VS + ++L+ +V+ QP
Sbjct: 1105 ---LHVTCVELMALAVSGEDVGNALLNVVLKSQP 1135
>gi|345778721|ref|XP_532052.3| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Canis lupus familiaris]
Length = 1368
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 147/734 (20%), Positives = 288/734 (39%), Gaps = 115/734 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 391 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 444
Query: 576 -----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAG 630
K E+ +Q + + M+D + + T ++ C T L
Sbjct: 445 IPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPMGA 494
Query: 631 VTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG----- 681
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 495 LVETIYGNGIMRVPLPGTSCLASASITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAK 554
Query: 682 GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 555 SSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRM 612
Query: 739 ---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDF 789
P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 613 HHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTR 667
Query: 790 FSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHT 846
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 668 FLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHN 726
Query: 847 WSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLS 906
W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 727 WASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFSM 782
Query: 907 HSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVE 966
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 783 QGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS 837
Query: 967 LQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLD 1021
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 838 -AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLK 892
Query: 1022 RQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 893 PNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVD 942
Query: 1068 ----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRF 1116
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 943 PPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPV 1002
Query: 1117 SFVRDILAYFYGHL 1130
+++ + L Y+ HL
Sbjct: 1003 TYLYNTLHYYEMHL 1016
>gi|20805922|gb|AAM28897.1|AF507918_1 mediator subunit SUR2 [Mus musculus]
Length = 1377
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 180/889 (20%), Positives = 338/889 (38%), Gaps = 157/889 (17%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 340 WQHLSSQLIFFVLFQFASFPHMVLSLHHKLA-GRRLIKGRDHLMWVLLQFISGSIHKNAL 398
Query: 515 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLN 570
+D V +L + E C D N PQS F +C IW LN + +
Sbjct: 399 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNGDS 450
Query: 571 NEQL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLS 627
Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 451 TLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LP 500
Query: 628 SAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-- 681
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 501 MGALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 560
Query: 682 ---GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 735
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 561 HTKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFS 618
Query: 736 YRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ 786
+R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 619 HRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQ 673
Query: 787 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATS 843
F + S E +E LNR ++ LA +D+ + + +L+ IM +
Sbjct: 674 FTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFT 732
Query: 844 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 903
H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 733 PHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQ 788
Query: 904 YLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 962
+ FP +LC +L++ H I VL + + +++ T D L++
Sbjct: 789 FSVQGFPP--LFLCLLWKMLLETDHISQIG----YNVLDKIGARALVAHVRTFADFLVY- 841
Query: 963 IHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----I 1017
E Q L K ++ V + ++ LD L+L L R + + ++ +
Sbjct: 842 ---EFSTSAGSQQ-LGKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQL 897
Query: 1018 TLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY---------- 1067
LL + + RV + + PEHWL S + H+S+ ++Y
Sbjct: 898 LLLKPNDFRNRVSDF-VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGLA 947
Query: 1068 --------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYY 1112
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 948 EQVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFH 1007
Query: 1113 PLRFSFVRDILAYF------YGHLPGKLIVRILNVFDLSK---IPFSESFPQHISSS--- 1160
+++ + L Y+ HL KL+ I+ ++ S+++ +H ++
Sbjct: 1008 DRPVTYLYNTLHYYEMCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNARED 1067
Query: 1161 NPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSE 1220
NP Y+ L+ LV+ + KSP GP E
Sbjct: 1068 NPWGSRKNSYYCKLIGRLVDTMA---------------------GKSP-----GPFPNCE 1101
Query: 1221 GRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
R F + +P + L +E+++L V + ++L+ +V+ QP
Sbjct: 1102 WR--FNEFPNPAAHA---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 1145
>gi|149032921|gb|EDL87776.1| cofactor required for Sp1 transcriptional activation, subunit 3,
isoform CRA_a [Rattus norvegicus]
Length = 1113
Score = 57.4 bits (137), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 145/699 (20%), Positives = 270/699 (38%), Gaps = 115/699 (16%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 340 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 398
Query: 515 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 571
+D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 399 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 449
Query: 572 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWL 626
+LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 450 SKLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----L 499
Query: 627 SSAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 681
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 500 PMGALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKL 559
Query: 682 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 734
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 560 AHTKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 617
Query: 735 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILS 785
++R+ P YR Q L+ + + + + + + LRL L + +
Sbjct: 618 SHRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQP 672
Query: 786 QRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMAT 842
Q F + S E +E LNR ++ LA +D+ + + +L+ IM
Sbjct: 673 QFTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMTF 731
Query: 843 SQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVK 902
+ H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 732 TPHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIIT 787
Query: 903 TYLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLH 961
+ FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 788 QFSMQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVY 841
Query: 962 HIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV----- 1016
G L K ++ V + ++ LD L+L L R + + ++
Sbjct: 842 EFSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQ 896
Query: 1017 ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------- 1067
+ LL + + RV + + PEHWL S + H+S+ ++Y
Sbjct: 897 LLLLKPNDFRNRVSDF-VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGL 946
Query: 1068 ---------------PTFFDDIAARLLPVIPLIVYRLIE 1091
P +F ++ R LPV ++++R +E
Sbjct: 947 AEQVDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLE 985
>gi|426234783|ref|XP_004011371.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 2 [Ovis aries]
Length = 1374
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 148/736 (20%), Positives = 285/736 (38%), Gaps = 110/736 (14%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 337 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 395
Query: 515 NSDSRKVETTRKILSFHRE-DRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 396 -ADFLPVMKLFDLLYPEKEFIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 448
Query: 574 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 628
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 449 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 498
Query: 629 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 681
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 499 GALVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 558
Query: 682 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 736
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 559 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 616
Query: 737 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 787
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 617 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 671
Query: 788 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 844
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 672 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 730
Query: 845 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 904
H W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 731 HNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHF 786
Query: 905 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
+ P +LC +L++ ++IN RVL + ++ T D L++
Sbjct: 787 SAQRSPP--LFLCLLWKMLLET--DHINQIG-FRVLERIGARALVVHVRTFADFLVYEFS 841
Query: 965 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1019
G L K ++ V + ++ LD L+L L R + + ++ + L
Sbjct: 842 TS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 896
Query: 1020 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1067
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 897 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 946
Query: 1068 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1114
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 947 VDPPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1006
Query: 1115 RFSFVRDILAYFYGHL 1130
+++ + L Y+ HL
Sbjct: 1007 PVTYLYNTLHYYEMHL 1022
>gi|345778719|ref|XP_003431769.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Canis lupus familiaris]
Length = 1374
Score = 57.4 bits (137), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 147/734 (20%), Positives = 288/734 (39%), Gaps = 115/734 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 342 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 396
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 397 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 450
Query: 576 -----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAG 630
K E+ +Q + + M+D + + T ++ C T L
Sbjct: 451 IPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPMGA 500
Query: 631 VTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG----- 681
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 501 LVETIYGNGIMRVPLPGTSCLASASITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAK 560
Query: 682 GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 561 SSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRM 618
Query: 739 ---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDF 789
P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 619 HHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTR 673
Query: 790 FSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHT 846
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 674 FLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHN 732
Query: 847 WSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLS 906
W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 733 WASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFSM 788
Query: 907 HSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVE 966
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 789 QGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS 843
Query: 967 LQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLD 1021
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 844 -AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLK 898
Query: 1022 RQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 899 PNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVD 948
Query: 1068 ----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRF 1116
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 949 PPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPV 1008
Query: 1117 SFVRDILAYFYGHL 1130
+++ + L Y+ HL
Sbjct: 1009 TYLYNTLHYYEMHL 1022
>gi|350578133|ref|XP_001925537.4| PREDICTED: mediator of RNA polymerase II transcription subunit 23,
partial [Sus scrofa]
Length = 1321
Score = 57.0 bits (136), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 147/734 (20%), Positives = 288/734 (39%), Gaps = 115/734 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 289 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 343
Query: 517 DSRKVETTRKILSFHRE-DRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 344 DFLPVMKLFDLLYPEKEFIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 397
Query: 576 -----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAG 630
K E+ +Q + + M+D + + T ++ C T L
Sbjct: 398 IPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPMGA 447
Query: 631 VTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG----- 681
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 448 LVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAK 507
Query: 682 GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 508 SSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRM 565
Query: 739 ---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDF 789
P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 566 HHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTR 620
Query: 790 FSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHT 846
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 621 FLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHN 679
Query: 847 WSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLS 906
W+ TL FP L+ + + ++ + V + + S + + + + +
Sbjct: 680 WASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFSA 735
Query: 907 HSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVE 966
P +LC +L++ ++IN RVL + ++ T D L++
Sbjct: 736 QRSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVVHVRTFADFLVYEFSTS 790
Query: 967 LQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLD 1021
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 791 -AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLK 845
Query: 1022 RQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 846 PNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVD 895
Query: 1068 ----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRF 1116
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 896 PPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPV 955
Query: 1117 SFVRDILAYFYGHL 1130
+++ + L Y+ HL
Sbjct: 956 TYLYNTLHYYEMHL 969
>gi|301775290|ref|XP_002923073.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Ailuropoda melanoleuca]
Length = 1374
Score = 57.0 bits (136), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 148/736 (20%), Positives = 285/736 (38%), Gaps = 110/736 (14%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 337 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 395
Query: 515 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 396 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 448
Query: 574 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 628
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 449 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 498
Query: 629 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 681
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 499 GALVETIYGNGIMRVPLPGTSCLASASITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 558
Query: 682 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 736
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 559 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 616
Query: 737 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 787
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 617 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 671
Query: 788 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 844
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 672 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 730
Query: 845 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 904
H W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 731 HNWASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHF 786
Query: 905 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 787 SMQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFS 841
Query: 965 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1019
G L K ++ V + ++ LD L+L L R + + ++ + L
Sbjct: 842 TS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 896
Query: 1020 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1067
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 897 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 946
Query: 1068 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1114
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 947 VDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1006
Query: 1115 RFSFVRDILAYFYGHL 1130
+++ + L Y+ HL
Sbjct: 1007 PVTYLYNTLHYYEMHL 1022
>gi|426234781|ref|XP_004011370.1| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Ovis aries]
Length = 1368
Score = 57.0 bits (136), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 147/734 (20%), Positives = 288/734 (39%), Gaps = 115/734 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHRE-DRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 391 DFLPVMKLFDLLYPEKEFIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 444
Query: 576 -----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAG 630
K E+ +Q + + M+D + + T ++ C T L
Sbjct: 445 IPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPMGA 494
Query: 631 VTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG----- 681
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 495 LVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAK 554
Query: 682 GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 555 SSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRM 612
Query: 739 ---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDF 789
P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 613 HHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTR 667
Query: 790 FSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHT 846
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 668 FLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHN 726
Query: 847 WSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLS 906
W+ TL FP L+ + + ++ + V + + S + + + + +
Sbjct: 727 WASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFSA 782
Query: 907 HSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVE 966
P +LC +L++ ++IN RVL + ++ T D L++
Sbjct: 783 QRSPP--LFLCLLWKMLLET--DHINQIG-FRVLERIGARALVVHVRTFADFLVYEFSTS 837
Query: 967 LQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLD 1021
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 838 -AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLK 892
Query: 1022 RQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 893 PNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVD 942
Query: 1068 ----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRF 1116
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 943 PPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPV 1002
Query: 1117 SFVRDILAYFYGHL 1130
+++ + L Y+ HL
Sbjct: 1003 TYLYNTLHYYEMHL 1016
>gi|383853263|ref|XP_003702142.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like [Megachile rotundata]
Length = 1341
Score = 57.0 bits (136), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 127/666 (19%), Positives = 259/666 (38%), Gaps = 116/666 (17%)
Query: 654 PLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLMLLAP-HSLFR 707
PL MS+L +++ + L + + + + A+VETY+RL++ SL
Sbjct: 524 PLSMSILDSLTVHSKMSLIHSIVTHVIKLAQSKSNMALAPALVETYSRLLVYTEIESLGI 583
Query: 708 SLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISAL 762
F ++Q P++ G +LE+ +YR+ P YR Q L+ + + +
Sbjct: 584 KGF--ISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQ-----LLSHLHSLAAVP 636
Query: 763 KVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 816
+ + + LRL L + Q F + + S E +E LNR V+ LA
Sbjct: 637 QTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAE-SEELNRALVLTLAR 695
Query: 817 IIKTRGIADADHV-LYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 875
+ G H + + +L IM + H+W+ TL+ FP +L + + + +
Sbjct: 696 SMHVTGTGSDSHSGTWCKELLNTIMQNTPHSWANHTLQCFPPVLSEFF----QQNSVPKE 751
Query: 876 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSAN 935
QQ + V + S S + + + P +LC ++ + + S
Sbjct: 752 NKQQIKKAVEEEYRNWASMSNENDIIAHFSVPGTPP--LFLCLLWKMIFET---DRISPI 806
Query: 936 LLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLP 995
++L +++++ D L+ + H + K I+ + + ++
Sbjct: 807 AYKILERIGARALSAHLRKFCDYLVFEFANSVGGQH-----VNKCVDTINDMIWKYNIVT 861
Query: 996 LDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR 1050
+D L+L L+ R + ++ + LL E + RV+ + + PEHW S
Sbjct: 862 IDRLILCLVLRTHEGSEAQVCFFIIQLLLLKAIEFRNRVQEF-VKENSPEHWKQSNWH-- 918
Query: 1051 VELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIE 1091
+K L H + E++ P +F ++ R LPV ++V+R +E
Sbjct: 919 ---EKHLAFHRKFPEKFAPEGIMEQASGGPSQYQSLPVYFGNVCLRFLPVFDIVVHRYLE 975
Query: 1092 NDAM-DSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRILNVF-- 1142
A+ S + +L ++ +++ + L Y+ L +L++ +L
Sbjct: 976 IPAVSKSLETLLEHLGCLYKFHDRPVTYLYNTLHYYERKLRDNPPLKRRLVLAVLGSLRE 1035
Query: 1143 -DLSKIPFSESFPQHISSSNP---VMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA 1198
S SE++ +++ S P LDY+ L+ +V
Sbjct: 1036 IRASGWALSEAYQMYMTRSTDDVVTWLPELDYYIRLVQRIVE------------------ 1077
Query: 1199 SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVS 1258
+ SG ++ F + +P + L +E++++PV+ + + +
Sbjct: 1078 ------------TMSGTAHFPATDWRFNEFPNPAAHA---LYVTCVELMAVPVAPNLVAN 1122
Query: 1259 SLVQIV 1264
SL+ +V
Sbjct: 1123 SLLDVV 1128
>gi|66561865|ref|XP_395793.2| PREDICTED: mediator of RNA polymerase II transcription subunit 23
isoform 1 [Apis mellifera]
Length = 1355
Score = 57.0 bits (136), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 130/666 (19%), Positives = 261/666 (39%), Gaps = 116/666 (17%)
Query: 654 PLPMSLLTGFSLNLCLKLALQMEDSIFGG-----QVVASIAMVETYTRLMLLAP-HSLFR 707
PL MS+L +++ + L + + + + A+VETY+RL++ SL
Sbjct: 538 PLSMSILDSLTVHSKMSLIHSIVTHVIKSAQSKSNMALAPALVETYSRLLVYTEIESLGI 597
Query: 708 SLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISAL 762
F ++Q P++ G +LE+ +YR+ P YR Q L+ + + +
Sbjct: 598 KGF--ISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQ-----LLSHLHSLAAVP 650
Query: 763 KVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 816
+ + + LRL L + Q F + + S E +E LNR V+ LA
Sbjct: 651 QTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAE-SEELNRALVLTLAR 709
Query: 817 IIKTRGIADADHV-LYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 875
+ G H + + +L IM + H+W+ TL+ FP +L + + + +
Sbjct: 710 SMHVTGTGSDSHSGTWCKELLNTIMLNTPHSWANHTLQCFPPVLSEFF----QQNSVPKE 765
Query: 876 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSAN 935
QQ + V + S S + + + P +LC I+ + + S
Sbjct: 766 NKQQIKKAVEEEYRNWASMSNENDIIAHFSVPGTPP--LFLCLLWKIIFET---DRISPI 820
Query: 936 LLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLP 995
++L +++++ D L+ + H + K ++ + + ++
Sbjct: 821 AYKILERIGARALSAHLRKFCDYLVFEFANSVGGQH-----VNKCVDTVNDMIWKYNIVT 875
Query: 996 LDILLLALIDR-----DDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR 1050
+D L+L L+ R D I + LL E + R + + + PEHW S
Sbjct: 876 IDRLILCLVLRTHEGSDAQVCFFIIQLLLLKAIEFRNRAQEF-VKENSPEHWKQSNWH-- 932
Query: 1051 VELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIE 1091
+K L H + E++ P +F ++ R LPV ++V+R +E
Sbjct: 933 ---EKHLAFHRKFPEKFAPEGIMEQTSGGPSQYQSLPVYFGNVCLRFLPVFDIVVHRYLE 989
Query: 1092 NDAM-DSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRILNVFDL 1144
A+ S + +L ++ +++ + L Y+ L +L+ +L
Sbjct: 990 IPAVSKSLETLLEHLGCLYKFHDRPVTYLYNTLHYYERKLRDRPPLKRRLVSAVLGSLRE 1049
Query: 1145 SKIP---FSESFPQHIS-SSNPVMC--PPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA 1198
+ P SE++ +++ SS+ V+ P LDY+ L+ +V
Sbjct: 1050 IRAPGWALSEAYQMYMTRSSDDVVSWMPELDYYIRLVRRIVE------------------ 1091
Query: 1199 SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVS 1258
+ SG ++ F + +P + L +E++++PV+ + + +
Sbjct: 1092 ------------TMSGTAHFPATDWRFNEFPNPAAHA---LYVTCVELMAVPVAPNIVAN 1136
Query: 1259 SLVQIV 1264
SL+ +V
Sbjct: 1137 SLLDVV 1142
>gi|380022930|ref|XP_003695286.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 23-like [Apis florea]
Length = 1355
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 130/666 (19%), Positives = 261/666 (39%), Gaps = 116/666 (17%)
Query: 654 PLPMSLLTGFSLNLCLKLALQMEDSIFGG-----QVVASIAMVETYTRLMLLAP-HSLFR 707
PL MS+L +++ + L + + + + A+VETY+RL++ SL
Sbjct: 538 PLSMSILDSLTVHSKMSLIHSIVTHVIKSAQSKSNMALAPALVETYSRLLVYTEIESLGI 597
Query: 708 SLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISAL 762
F ++Q P++ G +LE+ +YR+ P YR Q L+ + + +
Sbjct: 598 KGF--ISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQ-----LLSHLHSLAAVP 650
Query: 763 KVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 816
+ + + LRL L + Q F + + S E +E LNR V+ LA
Sbjct: 651 QTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAE-SEELNRALVLTLAR 709
Query: 817 IIKTRGIADADHV-LYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 875
+ G H + + +L IM + H+W+ TL+ FP +L + + + +
Sbjct: 710 SMHVTGTGSDSHSGTWCKELLNTIMLNTPHSWANHTLQCFPPVLSEFF----QQNSVPKE 765
Query: 876 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSAN 935
QQ + V + S S + + + P +LC I+ + + S
Sbjct: 766 NKQQIKKAVEEEYRNWASMSNENDIIAHFSVPGTPP--LFLCLLWKIIFET---DRISPI 820
Query: 936 LLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLP 995
++L +++++ D L+ + H + K ++ + + ++
Sbjct: 821 AYKILERIGARALSAHLRKFCDYLVFEFANSVGGQH-----VNKCVDTVNDMIWKYNIVT 875
Query: 996 LDILLLALIDR-----DDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR 1050
+D L+L L+ R D I + LL E + R + + + PEHW S
Sbjct: 876 IDRLILCLVLRTHEGSDAQVCFFIIQLLLLKAIEFRNRAQEF-VKENSPEHWKQSNWH-- 932
Query: 1051 VELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIE 1091
+K L H + E++ P +F ++ R LPV ++V+R +E
Sbjct: 933 ---EKHLAFHRKFPEKFAPEGIMEQTSGGPSQYQSLPVYFGNVCLRFLPVFDIVVHRYLE 989
Query: 1092 NDAM-DSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRILNVFDL 1144
A+ S + +L ++ +++ + L Y+ L +L+ +L
Sbjct: 990 IPAVSKSLETLLEHLGCLYKFHDRPVTYLYNTLHYYERKLRDRPPLKRRLVSAVLGSLRE 1049
Query: 1145 SKIP---FSESFPQHIS-SSNPVMC--PPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA 1198
+ P SE++ +++ SS+ V+ P LDY+ L+ +V
Sbjct: 1050 IRAPGWALSEAYQMYMTRSSDDVVSWMPELDYYIRLVRRIVE------------------ 1091
Query: 1199 SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVS 1258
+ SG ++ F + +P + L +E++++PV+ + + +
Sbjct: 1092 ------------TMSGTAHFPATDWRFNEFPNPAAHA---LYVTCVELMAVPVAPNIVAN 1136
Query: 1259 SLVQIV 1264
SL+ +V
Sbjct: 1137 SLLDVV 1142
>gi|345328526|ref|XP_001505931.2| PREDICTED: mediator of RNA polymerase II transcription subunit 23
[Ornithorhynchus anatinus]
Length = 1333
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 151/737 (20%), Positives = 290/737 (39%), Gaps = 112/737 (15%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 294 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 352
Query: 515 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 571
+D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 353 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 403
Query: 572 EQLQ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETV-MNWL 626
+LQ ++ + Q S ++ + M+D + + T ++ C T+ M L
Sbjct: 404 SKLQIPIPHSLKLHHEFLQQSLCNKTL---QMNDYKIALLCNAYSTNSE--CFTLPMGVL 458
Query: 627 SSAGVTELFPGSNLP---PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-- 681
V ++ N+ P M + PLPM+LL +++ + L + +
Sbjct: 459 ----VETIYGNGNMRISLPGISCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 514
Query: 682 ---GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 735
+ + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 515 HAKSSLALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFS 572
Query: 736 YRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ 786
YR+ P YR Q L+ + + S + + + LRL L + + Q
Sbjct: 573 YRMHHIQPHYRVQ-----LLSQLHSLASVPQTNQNQLHLCVESTALRLITALGSSEVQPQ 627
Query: 787 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATS 843
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 628 FTRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFT 686
Query: 844 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 903
H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 687 PHNWALHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITH 742
Query: 904 YLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHI 963
+ P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 743 FSMQGSPP--LFLCLLWKMLLET--DHINQIG-YRVLDRIGARALVAHVRTFADFLVYEF 797
Query: 964 HVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----IT 1018
G L K ++ V + ++ LD L+L L R + + ++ +
Sbjct: 798 STS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLL 852
Query: 1019 LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY----------- 1067
LL + + RV + + PEHWL + + H+S+ ++Y
Sbjct: 853 LLKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFEGLAE 902
Query: 1068 -------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYP 1113
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 903 QVNPPMQIQPSYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHD 962
Query: 1114 LRFSFVRDILAYFYGHL 1130
+++ + L Y+ HL
Sbjct: 963 RPVTYLYNTLHYYELHL 979
>gi|329664782|ref|NP_001192691.1| mediator of RNA polymerase II transcription subunit 23 [Bos taurus]
Length = 1368
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 147/734 (20%), Positives = 288/734 (39%), Gaps = 115/734 (15%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 336 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 390
Query: 517 DSRKVETTRKILSFHRE-DRCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 391 DFLPVMKLFDLLYPEKEFIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 444
Query: 576 -----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAG 630
K E+ +Q + + M+D + + T ++ C T L
Sbjct: 445 IPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPMGA 494
Query: 631 VTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG----- 681
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 495 LVETIYGNGIMRIPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAK 554
Query: 682 GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 555 SSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRM 612
Query: 739 ---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDF 789
P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 613 HHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTR 667
Query: 790 FSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHT 846
F + S E +E LNR ++ LA +D+ + + +L+ IM+ + H
Sbjct: 668 FLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHN 726
Query: 847 WSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLS 906
W+ TL FP L+ + + ++ + V + + S + + + + +
Sbjct: 727 WASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFSA 782
Query: 907 HSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVE 966
P +LC +L++ ++IN RVL + ++ T D L++
Sbjct: 783 QRSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVVHVRTFADFLVYEFSTS 837
Query: 967 LQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLD 1021
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 838 -AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLK 892
Query: 1022 RQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 893 PNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVD 942
Query: 1068 ----------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRF 1116
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 943 PPVPIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPV 1002
Query: 1117 SFVRDILAYFYGHL 1130
+++ + L Y+ HL
Sbjct: 1003 TYLYNTLHYYEMHL 1016
>gi|390359540|ref|XP_003729501.1| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like isoform 1 [Strongylocentrotus purpuratus]
gi|390359542|ref|XP_799077.3| PREDICTED: mediator of RNA polymerase II transcription subunit
23-like isoform 2 [Strongylocentrotus purpuratus]
Length = 1365
Score = 56.6 bits (135), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 109/529 (20%), Positives = 214/529 (40%), Gaps = 83/529 (15%)
Query: 654 PLPMSLLTGFSLNLCLKLALQMEDSIFGGQ----VVASIAMVETYTRLML------LAPH 703
P+P+SLL +++ + + + + I S A+VETY+RL+ L
Sbjct: 533 PIPLSLLDSLTVHAKMSVIHLIVNKILQWHKHPGTALSPALVETYSRLLAYIEIESLGIK 592
Query: 704 SLFRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIIS 760
S+F + + + G+ +LE+++YRL P +R Q L+ ++ + +
Sbjct: 593 GFTCSVFPKVCE-----VRAWGILNTLLELLSYRLHHIQPHFRVQ-----LLCNLHNLST 642
Query: 761 ALKVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIAL 814
+ + LR+ +L + Q F L + + ++ +E LNR V+ L
Sbjct: 643 LPQANHNQLFYCIESTALRIITSLGSAEVQPQLSRF-LNQPKQLLSQESEELNRAVVLTL 701
Query: 815 AIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGR---IDKRG 871
A + G + + +L +++ + H+W+ TL+ FPS L+ + RG
Sbjct: 702 ARAMHVTG-SQTLSGSWCTDILSTLVSNTPHSWASHTLKCFPSALQSFFEQHNMPTEMRG 760
Query: 872 L--TIQAWQQAETTVINQCTQL--LSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGH 927
L I+ T++I++ +L S + P Y +LC +L+
Sbjct: 761 LKRAIEDEYNRWTSMISEAERLHHFSNPSTPPY--------------FLCIIWKMLLVMD 806
Query: 928 PENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFF 987
E I + ++++L P ++ +I T D L+ H + ++
Sbjct: 807 TERI-TPTVVKILELIGPRGLSRHIRTFADYLVCEFSTSAGGQH-----VNMCVEKLNAM 860
Query: 988 VLTHELLPLDILLLALIDRDDDPHALR-----IVITLLDRQELQQRVKLYCMNRGPPEHW 1042
V ++ LD L+L+L R + + + I + +L E + RV + + PEHW
Sbjct: 861 VWKLNIITLDRLVLSLALRSHEGNEAQVGFFIIQLLILKPNEFRTRVSDF-VKENSPEHW 919
Query: 1043 L--------------YSGLFKRVELQKALGNHLSWKERY-PTFFDDIAARLLPVIPLIVY 1087
Y F L + G L+ +Y P +F ++ R LPV ++++
Sbjct: 920 TQSDWHSKHMAYHRKYPEKFFYEGLCEETGATLTTTPQYLPVYFSNVCLRFLPVFDILIH 979
Query: 1088 RLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGHL---PG 1132
R +E S + +L ++ +++ + L Y+ L PG
Sbjct: 980 RFLELPPVTKSLETILEHLGCLFKFHDRPVTYLFNTLHYYEKKLRERPG 1028
>gi|351714469|gb|EHB17388.1| Mediator of RNA polymerase II transcription subunit 23
[Heterocephalus glaber]
Length = 1035
Score = 55.5 bits (132), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 117/615 (19%), Positives = 247/615 (40%), Gaps = 95/615 (15%)
Query: 642 PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTR 696
P + + PLPM+LL +++ + L + + V + A+VETY+R
Sbjct: 439 PGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKSSVALAPALVETYSR 498
Query: 697 LML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKT 750
L++ + SL + ++Q P++ G+ +LE+ +YR+ P YR Q
Sbjct: 499 LLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQ----- 551
Query: 751 LMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTE 804
L+ + + + + + + LRL L + + Q F + S E +E
Sbjct: 552 LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFLSDPKTVLSAE-SE 610
Query: 805 TLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRD 861
LNR ++ LA +D+ + + +L+ IM+ + H W+ TL FP L+
Sbjct: 611 ELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNWASHTLSCFPGPLQ- 669
Query: 862 ALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAW 921
+ + ++ + V + + S + + + + P +LC
Sbjct: 670 ---AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFSIQGSPP--LFLCLLWK 724
Query: 922 ILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKAC 981
+L++ ++IN RVL + +++ T D L++ G L K
Sbjct: 725 MLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS-AGGQQLN----KCI 776
Query: 982 ANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNR 1036
++ V + ++ LD L+L L R + + ++ + LL + + RV + +
Sbjct: 777 EILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDF-VKE 835
Query: 1037 GPPEHWLYSGLFKRVELQKALGNHLSWKERY------------------------PTFFD 1072
PEHWL + + H+++ ++Y P +F
Sbjct: 836 NSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDPPVQIQSPYLPIYFG 886
Query: 1073 DIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYF----- 1126
++ R LPV ++++R +E S + +L ++ +++ + L Y+
Sbjct: 887 NVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYERYLR 946
Query: 1127 -YGHLPGKLIVRILNVFDLSK---IPFSESFPQHI---SSSNPVMCPPLDYFATLLLGLV 1179
HL KL+ I+ ++ S+++ +++ NP + P Y+ L+ LV
Sbjct: 947 NRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKNVMNPREDNPWV-PDDSYYCKLIGRLV 1005
Query: 1180 NNVIPALNYNSKSGS 1194
+N++ + + + S +
Sbjct: 1006 DNILQIVTFCTLSNN 1020
>gi|332023546|gb|EGI63782.1| Mediator of RNA polymerase II transcription subunit 23 [Acromyrmex
echinatior]
Length = 1357
Score = 55.1 bits (131), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 126/666 (18%), Positives = 260/666 (39%), Gaps = 116/666 (17%)
Query: 654 PLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLMLLAP-HSLFR 707
PL MS+L +++ + L + + + + A+VETY+RL++ SL
Sbjct: 540 PLSMSILDSLTVHSKMSLIHSIVTHVIKLAQSKSNMALAPALVETYSRLLVYTEIESLGI 599
Query: 708 SLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISAL 762
F ++Q P++ G +LE+ +YR+ P YR Q L+ + + +
Sbjct: 600 KGF--ISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQ-----LLSHLHSLAAVP 652
Query: 763 KVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 816
+ + + LRL L + Q F + + S E +E LNR V+ LA
Sbjct: 653 QTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAE-SEELNRALVLTLAR 711
Query: 817 IIKTRGI-ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 875
+ G AD+ + + +L IM + H+W+ TL+ FP +L + + + +
Sbjct: 712 SMHVTGTGADSLSGTWCKELLNTIMQNTPHSWANHTLQCFPPVLSEFF----QQNSVAKE 767
Query: 876 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSAN 935
QQ + V + S + + + + P +LC ++++ + S
Sbjct: 768 NKQQIKKAVEEEYRNWASMNNENDIIAHFSVPGTPP--LFLCLLWKMILET---DRISPI 822
Query: 936 LLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLP 995
+ ++L +++++ D L+ + H + K I+ + + ++
Sbjct: 823 VYKILERIGARALSAHLRKFCDYLVFEFANSVGGQH-----VNKCVDTINDMIWKYNIVT 877
Query: 996 LDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR 1050
+D L+L L R + + ++ + LL E + RV+ + + PEHW S
Sbjct: 878 IDRLVLCLALRTQEGNEAQVCFFIIQLLLLKAAEFRNRVQEF-VKENSPEHWKQSNWH-- 934
Query: 1051 VELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIE 1091
+K L H + E++ P +F ++ R LPV ++V+R +E
Sbjct: 935 ---EKHLAFHRKFPEKFAPEGIMEQTSGGPSQYQNLPVYFGNVCLRFLPVFDIVVHRYLE 991
Query: 1092 -NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRILNVFDL 1144
+ S + +L ++ +++ + L Y+ L +L+ +L
Sbjct: 992 IPPVIKSLEILLEHLGCLYKFHDRPVTYLYNTLHYYEKKLRDRPLLKRRLVSAVLGSLRE 1051
Query: 1145 SKIP---FSESFPQHISSSNP---VMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA 1198
+ P SE++ +++ N P LDY+ L+ +V
Sbjct: 1052 IRAPGWALSEAYQMYMTRFNDDAVSWVPELDYYIRLVQRIVE------------------ 1093
Query: 1199 SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVS 1258
+ SG ++ F + +P + L +E+++LPV+ + +
Sbjct: 1094 ------------TMSGTAHFPATDWRFNEFPNPAAHA---LYVTCVELMALPVAPDAVAN 1138
Query: 1259 SLVQIV 1264
L+ +V
Sbjct: 1139 FLLDVV 1144
>gi|242019825|ref|XP_002430359.1| CRSP complex subunit, putative [Pediculus humanus corporis]
gi|212515483|gb|EEB17621.1| CRSP complex subunit, putative [Pediculus humanus corporis]
Length = 1371
Score = 54.7 bits (130), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 132/684 (19%), Positives = 269/684 (39%), Gaps = 125/684 (18%)
Query: 637 GSNLPPNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFGGQVVASI-----AMV 691
S+LPP PL M++L +++ + L + + SI A+V
Sbjct: 511 SSSLPPGP-------TTPLSMAILDSLTVHSKMSLIHSIVTHVVKQAQSKSILALAPALV 563
Query: 692 ETYTRLMLLAP-HSL-FRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRY 744
ETY+RL++ SL + SHL P++ G+ +LE+ +YR+ P YR
Sbjct: 564 ETYSRLLVYTEIESLGIKGFISHLL---PTVFKHHAWGILYTLLEMFSYRMHHIQPHYRV 620
Query: 745 QGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKG 798
Q L+ + + + + + + LRL L + Q F + +
Sbjct: 621 Q-----LLSHLHSLAAVPQTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLNEPKTLV 675
Query: 799 STEFTETLNRITVIALAIIIKTRGI-ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPS 857
S E +E LNR V+ LA + G +D+ + + +L IM + H+W+ TL+ FP
Sbjct: 676 SAE-SEELNRALVLTLARSMHVTGTGSDSISGTWCKELLSTIMQNTPHSWANHTLQCFPL 734
Query: 858 LLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLC 917
L D + + Q + V + S + + + + P ++C
Sbjct: 735 ALHDFF----QHSPVQKENKPQLKKAVEEEYRNWASMNNENDIIAHFSVAGTPP--LFIC 788
Query: 918 AGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLL 977
++++ + I S ++L +++++ D L+ + +S +
Sbjct: 789 LLWKMILET--DRITSIA-YKILERIGARALSAHLRKFCDYLV------FEFANSRGEQH 839
Query: 978 FKACAN-ISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKL 1031
C + ++ + + ++ +D L+L L R + ++ + LL EL+ RV+
Sbjct: 840 VNKCVDALNDMIWKYNIVTIDRLVLCLALRTQEGSEAQVCFFIIQLLLLKAAELRNRVQD 899
Query: 1032 YCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY-------------------PTFFD 1072
+ + PEHW S +K L H + E++ P +F
Sbjct: 900 F-VKENSPEHWKQSNWH-----EKHLAFHRKYPEKFAPEGILEQSGGASSPYHSLPVYFG 953
Query: 1073 DIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH-- 1129
++ R LPV ++++R +E S + +L ++ +++ + L Y+ +
Sbjct: 954 NVCLRFLPVFDIVIHRYLELPPVTKSLETLLEHLGCLYKFHDRPVTYLYNTLHYYDRNLR 1013
Query: 1130 ----LPGKLIVRILNVFDLSKIP---FSESFPQHISSSNPVMC--PPLDYFATLLLGLVN 1180
L +L+ IL + P SE++ ++S S + P LDY+ + L+
Sbjct: 1014 DRPVLKRRLVAAILGALKDIRPPGWSLSEAYINYMSGSGDEVSWLPDLDYY----IKLIR 1069
Query: 1181 NVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLE 1240
++ +N + + D F + +P + L
Sbjct: 1070 RIVETMNGSKAHFPSTDW-------------------------RFNEFPNPAAHA---LY 1101
Query: 1241 TAVIEILSLPVSASQIVSSLVQIV 1264
+E++++PVS S + ++L+ +V
Sbjct: 1102 VTCVELMAVPVSPSVVANNLLDVV 1125
>gi|431838801|gb|ELK00731.1| Mediator of RNA polymerase II transcription subunit 23 [Pteropus
alecto]
Length = 1093
Score = 53.9 bits (128), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 148/736 (20%), Positives = 284/736 (38%), Gaps = 110/736 (14%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 334 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 392
Query: 515 NSDSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQ 573
+D V +L +E D N PQS F +C IW ++ + + +N +
Sbjct: 393 -ADFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSK 445
Query: 574 LQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSS 628
LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 446 LQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LPM 495
Query: 629 AGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG--- 681
+ E G+ + P + + PLPM+LL +++ + L + +
Sbjct: 496 GALVETIYGNGIMRVPLPGTSCLASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAH 555
Query: 682 --GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNY 736
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +Y
Sbjct: 556 AKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSY 613
Query: 737 RL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQR 787
R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 614 RMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQF 668
Query: 788 DFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQ 844
F + S E +E LNR ++ LA +D+ + + +L+ IM+ +
Sbjct: 669 TRFLSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTP 727
Query: 845 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 904
H W+ TL FP L+ + + ++ + V + + S + + + +
Sbjct: 728 HNWASHTLSCFPGPLQ----AFFQQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHF 783
Query: 905 LSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIH 964
P +LC +L+ ++IN RVL + +++ T D L++
Sbjct: 784 SMQGSPP--LFLCLLWKMLLDT--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFS 838
Query: 965 VELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITL 1019
G L K ++ V + ++ LD L+L L R + + ++ + L
Sbjct: 839 TS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLL 893
Query: 1020 LDRQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------ 1067
L + + RV + + PEHWL + + H+++ ++Y
Sbjct: 894 LKPNDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQ 943
Query: 1068 ------------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPL 1114
P +F ++ R LPV ++++R +E S + +L ++
Sbjct: 944 VDPPVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDR 1003
Query: 1115 RFSFVRDILAYFYGHL 1130
+++ + L Y+ HL
Sbjct: 1004 PVTYLYNTLHYYEMHL 1019
>gi|307208429|gb|EFN85808.1| Mediator of RNA polymerase II transcription subunit 23 [Harpegnathos
saltator]
Length = 1307
Score = 52.4 bits (124), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 127/666 (19%), Positives = 262/666 (39%), Gaps = 116/666 (17%)
Query: 654 PLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLMLLAP-HSLFR 707
PL MS+L +++ + L + + + + A+VETY+RL++ SL
Sbjct: 490 PLSMSILDSLTVHSKMSLIHSIVTHVIKLAQSKSNMALAPALVETYSRLLVYTEIESLGI 549
Query: 708 SLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISAL 762
F ++Q P++ G +LE+ +YR+ P YR Q L+ + + +
Sbjct: 550 KGF--ISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQ-----LLSHLHSLAAVP 602
Query: 763 KVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 816
+ + + LRL L + Q F + + S E +E LNR V+ LA
Sbjct: 603 QTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAE-SEELNRALVLTLAR 661
Query: 817 IIKTRGI-ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 875
+ G A+ + + +L IM + H+W+ TL FP +L + + + +
Sbjct: 662 SMHVTGTGAETLSGTWCKDLLNTIMQNTPHSWAYHTLECFPPVLSEFF----QQNSVAKE 717
Query: 876 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSAN 935
QQ + V + S S + + + P +LC ++++ + S
Sbjct: 718 NKQQIKKAVEEEYRNWASMSNENDIIAHFSVPGTPP--LFLCLLWKMILEI---DRISPI 772
Query: 936 LLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLP 995
++L +++++ D L+ + H + K I+ + + ++
Sbjct: 773 AYKILERIGARALSAHLRKFCDYLVFEFANSVGGQH-----VNKCVDTINDMIWKYNIVT 827
Query: 996 LDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR 1050
+D L+L L R + ++ + LL E + RV+ + + PEHW S
Sbjct: 828 IDRLVLCLALRTQEGSEAQVCFFIIQLLLLKSAEFRNRVQEF-VKENSPEHWKQSNWH-- 884
Query: 1051 VELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIE 1091
+K L H + E++ P +F ++ R LPV ++V+R +E
Sbjct: 885 ---EKHLAFHRKFPEKFAPEGIMEQTSGGPSQYQSLPVYFGNVCLRFLPVFDIVVHRYLE 941
Query: 1092 -NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRILNVFDL 1144
+ S + +L ++ +++ + L Y+ L +L+ +L
Sbjct: 942 IPPVIKSLETLLEHLGCLYKFHDRPVTYLYNTLHYYERKLRDRPPLKRRLVSAVLGSLRE 1001
Query: 1145 SKIP---FSESFPQHIS-SSNPVMC--PPLDYFATLLLGLVNNVIPALNYNSKSGSTMDA 1198
+ P SE++ +++ S++ V+ P LDY+ L+ +V
Sbjct: 1002 IRAPGWALSEAYQMYMTRSADDVVTWIPELDYYIRLVRRIVE------------------ 1043
Query: 1199 SLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQIVS 1258
+ SG ++ F + +P + L +E++++PV+ + + +
Sbjct: 1044 ------------TMSGTAHFPATDWRFNEFPNPAAHA---LYVTCVELMAVPVAPNLVAN 1088
Query: 1259 SLVQIV 1264
SL+ +V
Sbjct: 1089 SLLDVV 1094
>gi|268570110|ref|XP_002640694.1| C. briggsae CBR-SUR-2 protein [Caenorhabditis briggsae]
Length = 1582
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 124/307 (40%), Gaps = 28/307 (9%)
Query: 845 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 904
+ W EK+ +FP + I + D + L + TT ++ ++ + YV Y
Sbjct: 775 YGWPEKSTTFFPKWALEE-IKKTDVKKLAPNYAEILSTT--DEAFRMNTLLTGGQYVIRY 831
Query: 905 LSHSFPQHRQYLCAGAWILMQ--GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 962
P Y C A I Q PE ++ +V+ + SP+++ M + L+
Sbjct: 832 ADD--PNPITYHCMLAVIFKQLCSKPEQDLTSEYYQVMEKKSPKDIV----VMGNYLVDF 885
Query: 963 IHVELQRGHSLQDLLFKACANISFFVLTH-ELLPLDILLLALI---DRDDDPH-ALRIVI 1017
I +++ + FK A + + H + D LL+LI D+D ++I
Sbjct: 886 IIADVKNNQDCNEQTFKTIAKTAALMCFHFNIHRADRFLLSLIMHPSTDEDAQICIQIAN 945
Query: 1018 TLLDRQELQQRVKLYCMNRGP-----PEHWL-----YSGLFKRVELQKAL--GNHLSWKE 1065
L + Q+R+K + N P P ++ Y F E + + +
Sbjct: 946 EFLLTPKFQERIKWFYENDVPRKEKDPYEYIKAIVKYHDAFPEFEACQLVPKNDDTGTNV 1005
Query: 1066 RYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAY 1125
PT++ + RLLP++ VY +E ++ +L S F Y+P+ F+ +L
Sbjct: 1006 HMPTYYGCLIERLLPILDQYVYVALEQQGYKMSNALLQLVSMFYRYHPMPIHFMYSVLFV 1065
Query: 1126 FYGHLPG 1132
+G + G
Sbjct: 1066 SHGKMAG 1072
>gi|347595793|sp|Q60UZ5.3|MED23_CAEBR RecName: Full=Mediator of RNA polymerase II transcription subunit 23;
AltName: Full=Mediator complex subunit 23; AltName:
Full=Mediator complex subunit sur-2
Length = 1589
Score = 52.0 bits (123), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 67/307 (21%), Positives = 124/307 (40%), Gaps = 28/307 (9%)
Query: 845 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTY 904
+ W EK+ +FP + I + D + L + TT ++ ++ + YV Y
Sbjct: 779 YGWPEKSTTFFPKWALEE-IKKTDVKKLAPNYAEILSTT--DEAFRMNTLLTGGQYVIRY 835
Query: 905 LSHSFPQHRQYLCAGAWILMQ--GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 962
P Y C A I Q PE ++ +V+ + SP+++ M + L+
Sbjct: 836 ADD--PNPITYHCMLAVIFKQLCSKPEQDLTSEYYQVMEKKSPKDIV----VMGNYLVDF 889
Query: 963 IHVELQRGHSLQDLLFKACANISFFVLTH-ELLPLDILLLALI---DRDDDPH-ALRIVI 1017
I +++ + FK A + + H + D LL+LI D+D ++I
Sbjct: 890 IIADVKNNQDCNEQTFKTIAKTAALMCFHFNIHRADRFLLSLIMHPSTDEDAQICIQIAN 949
Query: 1018 TLLDRQELQQRVKLYCMNRGP-----PEHWL-----YSGLFKRVELQKAL--GNHLSWKE 1065
L + Q+R+K + N P P ++ Y F E + + +
Sbjct: 950 EFLLTPKFQERIKWFYENDVPRKEKDPYEYIKAIVKYHDAFPEFEACQLVPKNDDTGTNV 1009
Query: 1066 RYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDILAY 1125
PT++ + RLLP++ VY +E ++ +L S F Y+P+ F+ +L
Sbjct: 1010 HMPTYYGCLIERLLPILDQYVYVALEQQGYKMSNALLQLVSMFYRYHPMPIHFMYSVLFV 1069
Query: 1126 FYGHLPG 1132
+G + G
Sbjct: 1070 SHGKMAG 1076
>gi|322801416|gb|EFZ22077.1| hypothetical protein SINV_04347 [Solenopsis invicta]
Length = 1357
Score = 51.2 bits (121), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 102/516 (19%), Positives = 208/516 (40%), Gaps = 71/516 (13%)
Query: 654 PLPMSLLTGFSLNLCLKLALQMEDSIFG-----GQVVASIAMVETYTRLMLLAP-HSLFR 707
PL MS+L +++ + L + + + + A+VETY+RL++ SL
Sbjct: 540 PLSMSILDSLTVHSKMSLIHSIVTHVIKLAQSKSNMALAPALVETYSRLLVYTEIESLGI 599
Query: 708 SLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL---LPLYRYQGKTKTLMYDITKIISAL 762
F ++Q P++ G +LE+ +YR+ P YR Q L+ + + +
Sbjct: 600 KGF--ISQLLPTVFKSHAWGTLYTLLEMFSYRMHHIQPHYRVQ-----LLSHLHSLAAVP 652
Query: 763 KVKRG------DHRVLRLAENLCMNLILSQRDFFSLKREGKGSTEFTETLNRITVIALAI 816
+ + + LRL L + Q F + + S E +E LNR V+ LA
Sbjct: 653 QTNQTQLHLCVESTALRLITGLGSAEVQPQLSRFLSEPKTLVSAE-SEELNRALVLTLAR 711
Query: 817 IIKTRGI-ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 875
+ G AD+ + + +L IM + H+W+ TL+ FP +L + + + +
Sbjct: 712 SMHVTGTGADSLSGTWCKELLNTIMQNTPHSWANHTLQCFPPVLSEFF----QQNSVAKE 767
Query: 876 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSAN 935
QQ + V + S + + + + P +LC ++++ + S
Sbjct: 768 NKQQIKKAVEEEYRNWASMNNENDIIAHFSVPGTPP--LFLCLLWKMILET---DRISPI 822
Query: 936 LLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLP 995
++L +++++ D L+ + H + K I+ + + ++
Sbjct: 823 AYKILERIGARALSAHLRKFCDYLVFEFANSVGGQH-----VNKCVDTINDMIWKYNIVT 877
Query: 996 LDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR 1050
+D L+L L R + + ++ + LL E + RV+ + + PEHW S
Sbjct: 878 IDRLVLCLALRTQEGNEAQVCFFIIQLLLLKAAEFRNRVQEF-VKENSPEHWKQSNWH-- 934
Query: 1051 VELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVYRLIE 1091
+K L H + E++ P +F ++ R LPV ++V+R +E
Sbjct: 935 ---EKHLAFHRKFPEKFAPEGIMEQTSGGPSQYQNLPVYFGNVCLRFLPVFDIVVHRYLE 991
Query: 1092 -NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYF 1126
+ S + +L ++ +++ + L Y+
Sbjct: 992 IPPVIKSLEILLEHLGCLYKFHDRPVTYLYNTLHYY 1027
>gi|355701782|gb|AES01791.1| mediator complex subunit 23 [Mustela putorius furo]
Length = 864
Score = 49.7 bits (117), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 100/493 (20%), Positives = 198/493 (40%), Gaps = 79/493 (16%)
Query: 684 VVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL-- 738
V + A+VETY+RL++ + SL F ++Q P++ G+ +LE+ +YR+
Sbjct: 105 VALAPALVETYSRLLVYMEIESLGIKGF--ISQLLPTVFKSHAWGILHTLLEMFSYRMHH 162
Query: 739 -LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFFS 791
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 163 IQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFL 217
Query: 792 LKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWS 848
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W+
Sbjct: 218 SDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNWA 276
Query: 849 EKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHS 908
TL FP L+ + + ++ + V + + S + + + +
Sbjct: 277 SHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTNENDIITHFSMQG 332
Query: 909 FPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQ 968
P +LC +L++ ++IN RVL + +++ T D L++ E
Sbjct: 333 SPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY----EFS 383
Query: 969 RGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
Q L C I + V + ++ LD L+L L R + + ++ + LL
Sbjct: 384 TSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 441
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+S+ ++Y
Sbjct: 442 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMSYHKKYPEKLYFEGLAEQVDP 491
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFS 1117
P +F ++ R LPV ++++R +E S + +L ++ +
Sbjct: 492 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVT 551
Query: 1118 FVRDILAYFYGHL 1130
++ + L Y+ HL
Sbjct: 552 YLYNTLHYYEMHL 564
>gi|211826322|gb|AAH05508.2| Med23 protein [Mus musculus]
Length = 695
Score = 49.3 bits (116), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 98/514 (19%), Positives = 198/514 (38%), Gaps = 105/514 (20%)
Query: 803 TETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLL 859
+E LNR ++ LA +D+ + + +L+ IM + H W+ TL FP+ L
Sbjct: 8 SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFTPHNWASHTLSCFPAPL 67
Query: 860 RDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAG 919
+ + + ++ + V + + S + + + + FP +LC
Sbjct: 68 Q----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQFSVQGFPP--LFLCLL 121
Query: 920 AWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLF 978
+L++ H I +VL + +++ T D L++ E Q L
Sbjct: 122 WKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVY----EFSTSAGGQQL-- 171
Query: 979 KACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLY 1032
C I + V + ++ LD L+L L R + + ++ + LL + + RV +
Sbjct: 172 NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKPNDFRNRVSDF 231
Query: 1033 CMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY------------------------P 1068
+ PEHWL S + H+S+ ++Y P
Sbjct: 232 -VKENSPEHWLQSDWHTK---------HMSYHKKYPEKLYFEGLAEQVDPPVPIQSPYLP 281
Query: 1069 TFFDDIAARLLPVIPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYF- 1126
+F ++ R LPV ++++R +E S + +L ++ +++ + L Y+
Sbjct: 282 IYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYE 341
Query: 1127 -----YGHLPGKLIVRILNVFDLSK---IPFSESFPQHISSS---NPVMCPPLDYFATLL 1175
HL KL+ I+ ++ S+++ +H ++ NP + P Y+ L+
Sbjct: 342 MCLRNRDHLKRKLVHAIIGSLKDNRPQGWCLSDTYLKHAMNAREDNPWV-PEDSYYCKLI 400
Query: 1176 LGLVNNVIPALNYNSKSGSTMDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYT 1235
LV+ + KSP GP + R F + +P +
Sbjct: 401 GRLVDTMA---------------------GKSP-----GPFPNCDWR--FNEFPNPAAHA 432
Query: 1236 QLVLETAVIEILSLPVSASQIVSSLVQIVVNIQP 1269
L +E+++L V + ++L+ +V+ QP
Sbjct: 433 ---LHVTCVELMALAVPGKDVGNALLNVVLKSQP 463
>gi|149032922|gb|EDL87777.1| cofactor required for Sp1 transcriptional activation, subunit 3,
isoform CRA_b [Rattus norvegicus]
Length = 1047
Score = 49.3 bits (116), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 158/775 (20%), Positives = 303/775 (39%), Gaps = 117/775 (15%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 334 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 392
Query: 515 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIWSLNTSTREYLNN 571
+D V +L + E C D N PQS F +C IW ++ + + +N
Sbjct: 393 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDN 443
Query: 572 EQLQ-----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWL 626
+LQ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 444 SKLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----L 493
Query: 627 SSAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG- 681
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 494 PMGALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKL 553
Query: 682 ----GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIV 734
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+
Sbjct: 554 AHTKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMF 611
Query: 735 NYRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILS 785
++R+ P YR Q L+ + + + + + + LRL L + +
Sbjct: 612 SHRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQP 666
Query: 786 QRDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMAT 842
Q F + S E +E LNR ++ LA +D+ + + +L+ IM
Sbjct: 667 QFTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMTF 725
Query: 843 SQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVK 902
+ H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 726 TPHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIIT 781
Query: 903 TYLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLH 961
+ FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 782 QFSMQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVY 835
Query: 962 HIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLD 1021
G L K ++ V + ++ LD L+L L R + +
Sbjct: 836 EFSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGN---------- 880
Query: 1022 RQELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPV 1081
E Q+ PE + GL ++V+ + + P +F ++ R LPV
Sbjct: 881 --EAQKY----------PEKLYFEGLAEQVDPPVPIQS-----PYLPIYFGNVCLRFLPV 923
Query: 1082 IPLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYF------YGHLPGKL 1134
++++R +E S + +L ++ +++ + L Y+ HL KL
Sbjct: 924 FDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMCLRNRDHLKRKL 983
Query: 1135 IVRILNVFDLSKIP---FSESFPQHISSS---NPVMCPPLDYFATLLLGLVNNVI 1183
+ I+ ++ S+++ +H ++ NP + P Y+ L+ LV+N++
Sbjct: 984 VHAIIGSLKDNRPQGWCLSDTYLKHAMNAREDNPWV-PEDSYYCKLIGRLVDNIL 1037
>gi|384500334|gb|EIE90825.1| hypothetical protein RO3G_15536 [Rhizopus delemar RA 99-880]
Length = 1521
Score = 48.1 bits (113), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 153/363 (42%), Gaps = 51/363 (14%)
Query: 730 VLEIVNYRLLPLYRYQGKTKTLMYDITKIISALKVKRGDHRVLRLAENLCMNLILSQRDF 789
+L+++NYR + +Y + L++ I IS L + + R E+ +N+I Q D
Sbjct: 787 ILQLMNYRFIRFLKYSPLSSGLLHYIRYSISFL----DNRQCYRSLESFTVNVINMQMDV 842
Query: 790 FSLK------REGKGSTEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATS 843
L+ RE +E L R+TV ++ +IKTRG AD + +++++
Sbjct: 843 KLLRSLDDPLREKAIWFGESEMLARLTVGTISRLIKTRGQADIK-----TEQIHRVLSSL 897
Query: 844 QH---TWSEKTLRYFPSLLRDAL--IGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADP 898
WS L +FP ++R + + G+T QQ +T + T LL +
Sbjct: 898 YDFPLEWSPAALAHFPPVVRSFYENVNAEPRAGVTAAKVQQTMSTHKSLTTYLLQGGSAE 957
Query: 899 TYVKTYLSHSFPQHRQYLCAGAWILM--QGHPENINSANLLRVLREFSPEEVTSNIYTMV 956
+ ++L+ + H C W++ + + + ++ ++L P ++ +++ +V
Sbjct: 958 SEALSFLA-TQENHSCLFCI-LWVIAVSRNTVDCFHMPSVRKMLLMIPPSKMATHVIDLV 1015
Query: 957 DVLLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV 1016
D +L ++ + Q LLF + F+ H+ + + +L AL P +
Sbjct: 1016 DFIL-----SVEYPANSQALLFTL---LDGFIWKHQWINFNHVLFALTKGSGTPERTKKA 1067
Query: 1017 IT-----LLDRQELQQRVKLYCMNRGPPEHWLYSGLFKR----VELQKALGNHLSWKERY 1067
+ LL+ +E+ QRV HW G+ R + Q+ L +L Y
Sbjct: 1068 MILLQYLLLESREIAQRV----------HHWESLGISCRPWTEADYQEKLMRYLQKFPEY 1117
Query: 1068 PTF 1070
F
Sbjct: 1118 DEF 1120
>gi|91078526|ref|XP_970233.1| PREDICTED: similar to CRSP complex subunit 3 [Tribolium castaneum]
gi|270004027|gb|EFA00475.1| hypothetical protein TcasGA2_TC003334 [Tribolium castaneum]
Length = 1300
Score = 47.8 bits (112), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 112/570 (19%), Positives = 234/570 (41%), Gaps = 66/570 (11%)
Query: 687 SIAMVETYTRLMLLAP-HSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRLLPLY- 742
S A+VETY+RL++ SL + ++Q P++ G +LE+ +YR+ ++
Sbjct: 551 SPALVETYSRLLVYTEIESL--GIKGFISQLLPTVYKSHAWGTLYTLLEMFSYRMHHIHP 608
Query: 743 RYQGKTKTLMYDITKIISALKVKRG---DHRVLRLAENLCMNLILSQRDFFSLKREGKGS 799
Y+ + + ++ + + A + + + LRL L + + F + + S
Sbjct: 609 HYRVQLLSHLHSLAAVPQANQTQLHLCVESTALRLITGLGSGEVQPELSRFLAEPKTLIS 668
Query: 800 TEFTETLNRITVIALAIIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLL 859
E +E LNR V+ LA G AD + +L I ++ H W+ TL FP
Sbjct: 669 AE-SEELNRALVLTLARATHVTG-ADGS---WCHELLATIAQSTPHAWAPHTLECFPR-- 721
Query: 860 RDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAG 919
AL + + + QQ + V + + S + + + + P +LC
Sbjct: 722 --ALAEFFTQHAVPKENKQQLKKAVEEEYRKWSSMNNENDMMAHFGVAGAPP--LFLCLL 777
Query: 920 AWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFK 979
+L++ ++I ++L +++++ D L+ H + K
Sbjct: 778 WKMLLET--DHITPIAY-KILERIGARALSAHLRKFCDCLVFEFSNSPGGQH-----VNK 829
Query: 980 ACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDRQELQQRVKLYCM 1034
I+ + + ++ +D L+L L R + ++ + LL E + RV+ +
Sbjct: 830 CVDTINDMIWKYNIVTIDRLVLCLALRTQEGSEAQVCSFIIQLVLLKATEFRNRVQDFVK 889
Query: 1035 NRGPPEHWLYSGLF-KRVELQKALGNHLSWKER---YPTFFDDIAARLLPVIPLIVYRLI 1090
+ P +HW + K +E + + +E+ Y +F ++ R LPV ++V+R +
Sbjct: 890 DNSP-DHWNQTNWHEKHLEFHRKYPEKFAPEEQSSGYHPYFGNVCLRFLPVFDIVVHRFL 948
Query: 1091 ENDAMDSADRVLATYSSFLAYYPLR-FSFVRDILAYFYGHLPGKLIVR---ILNVFDLSK 1146
E + + +L + L + R +++ + L Y+ L + ++ + V K
Sbjct: 949 EIPQVTKSLEILLEHLGCLYKFHDRPVTYLYNTLHYYETRLRDRPPLKRRLVAAVLGTLK 1008
Query: 1147 IPFSESFPQHIS-SSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGSTMDASLRAPHN 1205
SE + ++ +++ + P LDY+ + +V V+ L G+T ++ + N
Sbjct: 1009 DSLSEPYQLYLGRAADEMWTPELDYY----IQVVKRVVDIL-----GGATANSVIDWRFN 1059
Query: 1206 KSP--------------MTSQSGPSNVSEG 1221
+ P M +GP V+ G
Sbjct: 1060 EFPNAGAHILYTSCVELMALSAGPVAVANG 1089
>gi|444728992|gb|ELW69423.1| Mediator of RNA polymerase II transcription subunit 23 [Tupaia
chinensis]
Length = 1186
Score = 46.6 bits (109), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 93/453 (20%), Positives = 182/453 (40%), Gaps = 78/453 (17%)
Query: 684 VVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL-- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 314 VALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMHH 371
Query: 739 -LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFFS 791
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 372 IQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRFL 426
Query: 792 LKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTWS 848
+ S E +E LNR ++ LA +D+ + + +L+ IM + H W+
Sbjct: 427 SDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFTPHNWA 485
Query: 849 EKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSHS 908
TL FP L+ + + ++ + V + + S S + + +
Sbjct: 486 SHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQG 541
Query: 909 FPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQ 968
P +LC +L++ ++IN RVL + +++ T D L++ E
Sbjct: 542 SPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVY----EFS 592
Query: 969 RGHSLQDLLFKACANI-SFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
Q L C I + V + ++ LD L+L L R + + ++ + LL
Sbjct: 593 TSAGGQQL--NKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 650
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERY--------------- 1067
+ + RV + + PEHWL + + H+++ ++Y
Sbjct: 651 NDFRNRVSDF-VKENSPEHWLQNDWHTK---------HMNYHKKYPEKLYFEGLAEQVDP 700
Query: 1068 ---------PTFFDDIAARLLPVIPLIVYRLIE 1091
P +F ++ R LPV ++++R +E
Sbjct: 701 PVQIQSPYLPIYFGNVCLRFLPVFDIVIHRFLE 733
>gi|308490380|ref|XP_003107382.1| CRE-SUR-2 protein [Caenorhabditis remanei]
gi|308251750|gb|EFO95702.1| CRE-SUR-2 protein [Caenorhabditis remanei]
Length = 1614
Score = 46.6 bits (109), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 125/310 (40%), Gaps = 35/310 (11%)
Query: 845 HTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPT-YVKT 903
+ W EK+ YFP + +I D L E + T L PS P +V
Sbjct: 780 YGWPEKSTSYFPKWALE-IIKNTDATKLLPNY---EEILTKTRETARLHPSLTPNQFVMR 835
Query: 904 YLSHSFPQHRQYLCAGAWILMQGHPENINS-----ANLLRVLREFSPEEVTSNIYTMVDV 958
Y P + C A +L + ++S + VL + SP+++ ++D
Sbjct: 836 YGDDQDPT--TFYCMMA-VLFKFAYAAVDSKWDITSEFYEVLEKKSPKDIVVMGNYLIDY 892
Query: 959 LLHHIHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALI----DRDDDPHALR 1014
++ + + + +++ KA A V TH++ D LL+LI + +D ++
Sbjct: 893 IIADVKTQDCNEQTFKNIA-KAAA---VLVFTHQIQRADRFLLSLIMHPGNDEDALICIQ 948
Query: 1015 IVITLLDRQELQQRVKLYCMN----RGPPEHWLYSGL--------FKRVELQKALGNHLS 1062
I + E Q R++ + N P+ ++ + + F+ EL N S
Sbjct: 949 IANEFILTTEFQDRIRWFYQNVPRKDQHPDEYIKAIVKYHDAFPEFEACELVSKYDN--S 1006
Query: 1063 WKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSFLAYYPLRFSFVRDI 1122
PT++ + RLLP++ VY +E +VL T + F Y+ + F+ +
Sbjct: 1007 TNPHMPTYYGCLIERLLPILDQYVYVALEQQGYKMNPQVLQTVAMFYKYHAMPIHFMYSV 1066
Query: 1123 LAYFYGHLPG 1132
L +G + G
Sbjct: 1067 LFTSHGLMSG 1076
>gi|402868278|ref|XP_003898234.1| PREDICTED: LOW QUALITY PROTEIN: mediator of RNA polymerase II
transcription subunit 23, partial [Papio anubis]
Length = 1318
Score = 46.6 bits (109), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 132/621 (21%), Positives = 249/621 (40%), Gaps = 79/621 (12%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 289 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 343
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 344 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 397
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 398 IPIPHSLRLHHEFLQQSLRNKSLQ---MNDYKIALLCNAYSTNSE--CFT----LPMGAL 448
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 449 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 508
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 509 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 566
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 567 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 621
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 622 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 680
Query: 848 SEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKTYLSH 907
+ TL FP L+ + + ++ + V + + S S + + +
Sbjct: 681 ASHTLSCFPGPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMSNENDIITHFSMQ 736
Query: 908 SFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVEL 967
P +LC +L++ ++IN RVL + +++ T D L++
Sbjct: 737 GSPP--LFLCLLWKMLLET--DHINQIG-YRVLERIGARALVAHVRTFADFLVYEFSTS- 790
Query: 968 QRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIV-----ITLLDR 1022
G L K ++ V + ++ LD L+L L R + + ++ + LL
Sbjct: 791 AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQLLLLKP 846
Query: 1023 QELQQRVKLYCMNRGPPEHWL 1043
+ + RV + + PEHWL
Sbjct: 847 NDFRNRVSDF-VKENSPEHWL 866
>gi|26324494|dbj|BAC26001.1| unnamed protein product [Mus musculus]
Length = 960
Score = 46.6 bits (109), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 158/779 (20%), Positives = 303/779 (38%), Gaps = 115/779 (14%)
Query: 455 WLIFSDVFFFLVKSGCIDFVDFVDKLVSRLQDGDNHILRTNHVTWLLAQIIRVELVMGAL 514
W S F V F V L +L G I +H+ W+L Q I + AL
Sbjct: 247 WQHLSSQLIFFVLFQFASFPHMVLSLHQKLA-GRGLIKGRDHLMWVLLQFISGSIQKNAL 305
Query: 515 NSDSRKVETTRKILSFHREDRCT---DPNNPQSILLDFISSCQNLRIW-SLNTSTREYLN 570
+D V +L + E C D N PQS F +C IW LN + +
Sbjct: 306 -ADFLPVMKLFDLL--YPEKECIPVPDINKPQSTH-AFAMTC----IWIHLNRKAQNGDS 357
Query: 571 NEQL---QKGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLS 627
Q+ K E+ +Q + + M+D + + T ++ C T L
Sbjct: 358 TLQIPIPHSLKLHHEFLQQSLRNKSL----QMNDYKIALLCNAYSTNSE--CFT----LP 407
Query: 628 SAGVTELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-- 681
+ E G+ + P + V PLPM+LL +++ + L + +
Sbjct: 408 MGALVETIYGNGIMRVPLPGTSCLASASVTPLPMNLLDSLTVHAKMSLIHSIATRVIKLA 467
Query: 682 ---GQVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVN 735
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +
Sbjct: 468 HTKSSVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFS 525
Query: 736 YRL---LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQ 786
+R+ P YR Q L+ + + + + + + LRL L + + Q
Sbjct: 526 HRMHHIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQ 580
Query: 787 RDFFSLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATS 843
F + S E +E LNR ++ LA +D+ + + +L+ IM +
Sbjct: 581 FTRFLNDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMNFT 639
Query: 844 QHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQAWQQAETTVINQCTQLLSPSADPTYVKT 903
H W+ TL FP+ L+ + + ++ + V + + S + + +
Sbjct: 640 PHNWASHTLSCFPAPLQ----AFFKQNNVPQESRFNLKKNVEEEYRKWKSMTDENEIITQ 695
Query: 904 YLSHSFPQHRQYLCAGAWILMQ-GHPENINSANLLRVLREFSPEEVTSNIYTMVDVLLHH 962
+ FP +LC +L++ H I +VL + +++ T D L++
Sbjct: 696 FSVQGFPP--LFLCLLWKMLLETDHISQIG----YKVLERIGARALVAHVRTFADFLVYE 749
Query: 963 IHVELQRGHSLQDLLFKACANISFFVLTHELLPLDILLLALIDRDDDPHALRIVITLLDR 1022
G L K ++ V + ++ LD L+L L R + +
Sbjct: 750 FSTS-AGGQQLN----KCIEILNDMVWKYNIVTLDRLILCLAMRSHEGN----------- 793
Query: 1023 QELQQRVKLYCMNRGPPEHWLYSGLFKRVELQKALGNHLSWKERYPTFFDDIAARLLPVI 1082
E Q+ PE + GL ++V+ + + P +F ++ R LPV
Sbjct: 794 -EAQKY----------PEKLYFEGLAEQVDPPVPIQS-----PYLPIYFGNVCLRFLPVF 837
Query: 1083 PLIVYRLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYF------YGHLPGKLI 1135
++++R +E S + +L ++ +++ + L Y+ HL KL+
Sbjct: 838 DIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYNTLHYYEMCLRNRDHLKRKLV 897
Query: 1136 VRILNVFDLSKIP---FSESFPQHISSS---NPVMCPPLDYFATLLLGLVNNVIPALNY 1188
I+ ++ S+++ +H ++ NP + P Y+ L+ LV+N++ ++ +
Sbjct: 898 HAIIGSLKDNRPQGWCLSDTYLKHAMNAREDNPWV-PEDSYYCKLIGRLVDNILSSVMF 955
>gi|321478574|gb|EFX89531.1| hypothetical protein DAPPUDRAFT_310605 [Daphnia pulex]
Length = 1351
Score = 45.4 bits (106), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 129/671 (19%), Positives = 254/671 (37%), Gaps = 118/671 (17%)
Query: 652 VNPLPMSLLTGFSLNLCLKLALQMEDSIFGG-----QVVASIAMVETYTRLMLLAP-HSL 705
++P+P++ L +++ + L + + V + A+VETY+RL++ SL
Sbjct: 535 ISPIPLAFLDALTVHAKMSLIHSIVTHVIKCAQTKMNVPLAPALVETYSRLLVYTEIESL 594
Query: 706 FRSLFSHLAQRNPSLLAKVGVTPLVLEIVNYR---LLPLYRYQGKTKTLMYDITKIISAL 762
F + S G+ ++E+ +R + P YR Q +T + S
Sbjct: 595 GIKGFITQVMTSVSKSQAWGIFHTLVEMFTFRVHHMQPQYRIQL--------LTLLHSCA 646
Query: 763 KVKRGDHRVLRLAENLCMNLI--LSQRDFFSLKREGKGS-----TEFTETLNRITVIALA 815
++ +++ EN + LI L + + +E LNR ++ LA
Sbjct: 647 VPQQHQTQLILCVENAALRLIGLLGAAEMQPCYSRSAADIKPLFSSDSEELNRALILTLA 706
Query: 816 IIIKTRGIADADHVLYLQTMLEQIMATSQHTWSEKTLRYFPSLLRDALIGRIDKRGLTIQ 875
+I G + H + + +L I + H+WS T FP L + G+ + + +
Sbjct: 707 RVISVAG-CETQHSSWYKDLLTLIQQQTPHSWSSNTRDCFPPPLAE-FFGQAANQPVK-E 763
Query: 876 AWQQAETTVINQCTQLLSPSADPTYVKTYLSHSFPQHRQ---YLCAGAWILMQGHPENIN 932
+ QQ + + + ++L+ + D + +H PQ +LC L++ E IN
Sbjct: 764 SKQQLKQNIEEEHRKVLTMNPD-----DWPAHFAPQSNNPPFFLCLLWKQLLET--ERIN 816
Query: 933 SANLLRVLREFSPEEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANI------SF 986
+ + + S++ T D L++ + H C ++ +
Sbjct: 817 PVAY-KCIERIGARGLGSHLRTFCDFLVYEFANSGKGQH------VNKCIDVLNEMVWQY 869
Query: 987 FVLTHELLPLDILLLALIDRDDDPHALRIVITLLDRQELQQRVKLYCMNRGPPEHWLYSG 1046
V+T E L L + L L + I + LL + + RV+ + + EHW +
Sbjct: 870 NVVTIERLVLCLALRPLEGNEAQVCCFIIQLLLLKTPQFRSRVQDFVKDNSS-EHWRQNN 928
Query: 1047 LFKRVELQKALGNHLSWKERY-------------------PTFFDDIAARLLPVIPLIVY 1087
+K L + ER+ PT+F ++ R LPV + ++
Sbjct: 929 WH-----EKHLAFQRKFPERFGPPESVLESIGQGGSYQSLPTYFGNVCLRFLPVFDITIH 983
Query: 1088 RLIE-NDAMDSADRVLATYSSFLAYYPLRFSFVRDILAYFYGH------LPGKLIVRILN 1140
R E S + +L ++ +++ L Y+ L KL+ I+
Sbjct: 984 RFTEIPPVTKSLETILEHLGCLYKFHDRPVTYLYTTLHYYERKLRDRPLLKRKLVSSIMG 1043
Query: 1141 VFDLSKIP---FSESFPQHIS--SSNPVMCPPLDYFATLLLGLVNNVIPALNYNSKSGST 1195
+ P SES+ + + + + P LDY+ L+ LV+
Sbjct: 1044 SLKDVRPPGWALSESYLNYSTRQADDLNWLPELDYYVKLVGRLVD--------------- 1088
Query: 1196 MDASLRAPHNKSPMTSQSGPSNVSEGRKEFYQNQDPGTYTQLVLETAVIEILSLPVSASQ 1255
+ +G S ++ N+ P + TAV E+L+LP S +
Sbjct: 1089 ---------------TTAGRSPFPFPAMDWRFNEFPNASCHALYVTAV-ELLALPASPAI 1132
Query: 1256 IVSSLVQIVVN 1266
+ ++L+ +V+
Sbjct: 1133 VANALMDVVLQ 1143
>gi|4220898|gb|AAD12724.1| transcriptional co-activator CRSP130 [Homo sapiens]
Length = 936
Score = 41.6 bits (96), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 178/433 (41%), Gaps = 59/433 (13%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 392 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 446
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 447 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 500
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 501 IPIPHSLRLHHEFLQQSLRNK---SLQMNDYKIALLCNAYSTNSE--CFT----LPMGAL 551
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 552 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 611
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 612 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 669
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 670 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 724
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 725 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 783
Query: 848 SEKTLRYFPSLLR 860
+ TL FP L+
Sbjct: 784 ASHTLSCFPGPLQ 796
>gi|341903729|gb|EGT59664.1| hypothetical protein CAEBREN_16129 [Caenorhabditis brenneri]
Length = 1416
Score = 40.8 bits (94), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 54/264 (20%), Positives = 110/264 (41%), Gaps = 34/264 (12%)
Query: 886 NQCTQLLSPSADPTYVKTYLSHSFPQHRQYLCAGAWILMQGHPENINSANLLRVLREFSP 945
NQ ADPT + ++ F A++ + P+ ++ V+ + SP
Sbjct: 722 NQFVSRYGDDADPTTMYCMMAVVF--------RFAYVSLDSKPDI--TSEYYEVMEKKSP 771
Query: 946 EEVTSNIYTMVDVLLHHIHVELQRGHSLQDLLFKACANIS-FFVLTHELLPLDILLLALI 1004
+++ M + L+ +I ++ + + + FK A + + +++L D LL+LI
Sbjct: 772 KDIV----LMGNYLIDYIIADM-KTQDINEQTFKNIAKAAAILIFQYQILRADRFLLSLI 826
Query: 1005 ----DRDDDPHALRIVITLLDRQELQQRVKLYCMNRGP----PEHWLYSGL--------F 1048
+D ++I + QE Q+R++ + N P ++ S + F
Sbjct: 827 MHPGTDEDALLCVQIANEFILTQEFQERIRWFHQNVPKKDQYPTEFIKSIVKYHDNFPEF 886
Query: 1049 KRVELQKALGNHLSWKERYPTFFDDIAARLLPVIPLIVYRLIENDAMDSADRVLATYSSF 1108
+ EL + + S PT++ + RLLP++ VY +E ++L T + F
Sbjct: 887 EACELVRKYDS--SANPHMPTYYGCLIERLLPILDQYVYVALEQQGYKLNPQILQTLALF 944
Query: 1109 LAYYPLRFSFVRDILAYFYGHLPG 1132
Y+ F+ +L +G + G
Sbjct: 945 YKYHAQPIHFMYSVLYISHGKMSG 968
>gi|119568436|gb|EAW48051.1| cofactor required for Sp1 transcriptional activation, subunit 3,
130kDa, isoform CRA_c [Homo sapiens]
Length = 892
Score = 40.8 bits (94), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 98/433 (22%), Positives = 178/433 (41%), Gaps = 59/433 (13%)
Query: 459 SDVFFFLVKSGCIDFVDFVDKLVSRLQD--GDNHILRTNHVTWLLAQIIRVELVMGALNS 516
S + FF++ F F ++S Q G I +H+ W+L Q I + AL +
Sbjct: 348 SQLIFFVL----FQFASFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNAL-A 402
Query: 517 DSRKVETTRKILSFHRED-RCTDPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQ 575
D V +L +E D N PQS F +C IW ++ + + +N +LQ
Sbjct: 403 DFLPVMKLFDLLYPEKEYIPVPDINKPQSTH-AFAMTC----IW-IHLNRKAQNDNSKLQ 456
Query: 576 ----KGKQIDEWWRQVSKGDRMMDYMNMDDRSVGMFWVVSYTMAQPACETVMNWLSSAGV 631
++ + Q S ++ + M+D + + T ++ C T L +
Sbjct: 457 IPIPHSLRLHHEFLQQSLRNKSL---QMNDYKIALLCNAYSTNSE--CFT----LPMGAL 507
Query: 632 TELFPGSNLP----PNERLMVMREVNPLPMSLLTGFSLNLCLKLALQMEDSIFG-----G 682
E G+ + P M + PLPM+LL +++ + L + +
Sbjct: 508 VETIYGNGIMRIPLPGTNCMASGSITPLPMNLLDSLTVHAKMSLIHSIATRVIKLAHAKS 567
Query: 683 QVVASIAMVETYTRLML-LAPHSLFRSLFSHLAQRNPSLLAK--VGVTPLVLEIVNYRL- 738
V + A+VETY+RL++ + SL + ++Q P++ G+ +LE+ +YR+
Sbjct: 568 SVALAPALVETYSRLLVYMEIESL--GIKGFISQLLPTVFKSHAWGILHTLLEMFSYRMH 625
Query: 739 --LPLYRYQGKTKTLMYDITKIISALKVKRG------DHRVLRLAENLCMNLILSQRDFF 790
P YR Q L+ + + + + + + LRL L + + Q F
Sbjct: 626 HIQPHYRVQ-----LLSHLHTLAAVAQTNQNQLHLCVESTALRLITALGSSEVQPQFTRF 680
Query: 791 SLKREGKGSTEFTETLNRITVIALAIIIKTRGI---ADADHVLYLQTMLEQIMATSQHTW 847
+ S E +E LNR ++ LA +D+ + + +L+ IM+ + H W
Sbjct: 681 LSDPKTVLSAE-SEELNRALILTLARATHVTDFFTGSDSIQGTWCKDILQTIMSFTPHNW 739
Query: 848 SEKTLRYFPSLLR 860
+ TL FP L+
Sbjct: 740 ASHTLSCFPGPLQ 752
>gi|195383932|ref|XP_002050679.1| GJ20078 [Drosophila virilis]
gi|194145476|gb|EDW61872.1| GJ20078 [Drosophila virilis]
Length = 1566
Score = 40.4 bits (93), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 1248 SLPVSASQIVSSLVQIVVNIQPTLIQT--SNGPYGASNSVGQGSVLPTSPSG-GSTDSLG 1304
S+P SAS + S+L + QPT+ QT ++ P + + G G+ +P S S GST LG
Sbjct: 273 SMPPSASNLGSTLGASTPSQQPTMSQTGSTSSPPASQSGYGLGASMPPSASNLGST--LG 330
Query: 1305 ASRSTP----SVSGINTSSFVSRSGY 1326
ASR+T S SG +S S+SGY
Sbjct: 331 ASRTTQQPTMSQSGSTSSPVASQSGY 356
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.134 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,059,523,695
Number of Sequences: 23463169
Number of extensions: 1002771971
Number of successful extensions: 2696250
Number of sequences better than 100.0: 251
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 198
Number of HSP's that attempted gapping in prelim test: 2692970
Number of HSP's gapped (non-prelim): 3066
length of query: 1563
length of database: 8,064,228,071
effective HSP length: 156
effective length of query: 1407
effective length of database: 8,698,941,003
effective search space: 12239409991221
effective search space used: 12239409991221
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 84 (37.0 bits)