Your job contains 1 sequence.
>000404
MREGLRSGDISVKAEVKLMSERENEVNDEKKNLFDLNDETTEKEDSGSTSPKETMEIKEI
DEKASDECGETGLGENDRNSSRVDCVVKEDSKVKNAGTVFWSGLGIKSGNDKESNKIEIE
EKDRNTGCDGSENERGFDVHVEGLRSGSISVKPEDKFILGPESEVIDKKRILFDLNDEII
PFMDFGPDSVKENIKTKENDAPINDECGEIGLDGNKRKRSRVYGEELGEDVVVKKRLKED
ITAKNVGRVLRSRLGIKRGSEKESNQAEIEERGSNRVFDGSENERDVDMQMEVSNETNGA
KGRKKVKRKRGRPPKMLENDESEGEQTKISKVKPGRPPKLNKIDESCEQRRKKVKDKRGR
PRHKTHESGESDGEQRKRLKNKLGRPRKDGSDDRGSKRLKKKRGRPPKLQGINEVLKGKV
GKGKKVNGIRKSQRHTLAVGLKRDVPTYGLIPEKRHGGTEFNAQRFAPDKKNSCAETGEA
ISRQTMKTVNQREKKCLETHQEETLSKHGAKQLLRDRIVELLLAAGWKIEYRPRNGREYC
DAVYVNPEGKTHWSITLAYSVLKNHYEQEGGSSDTSKTGFTFTPIPEDELSILKKVINKS
RSDRNKKKKGKNLGTDGEIVTKKKKKKGKTNSAASPHGKSQKRGIKGKPSVSEGGTSHNG
MSIPARRHKLQETQQRKRCALLVRNSVEGEESNGDGFVAYDGKWTLLAWMIDTGTVPLNE
KVQYWNQRKTRVMLQGRIARDGIRCDCCSEIFTISKFDTHSKSKLCHPFQNLYFESGSSL
LQCILDSWNKQDESKRKGFHFVNFDGEDPNDDTCGICGDGGDLICCDGCPSTFHQNCLDI
KKFPSGKWHCVYCSCQFCGRINESTCHVNDQDDSALSTLQICSLCEEKYHQSCSQTDGAV
QYEPSSLSFCGKKCQEIFERLEKLLGVKHDLEGGYTWSLVHRFDVSTDLSLSDVCQKVEC
NARLAVALSVMDECFLPLPDHRSGINLIHNILYNFGSNFKRLNYKGFFTAILERDDEIIS
AASIRIHGKELAEMPFIGTRHMYRRQGMCRRLLTGIESALCSLNVEKLIIPAISELRETW
TSVFGFQPLEVSSKQKMRNMSLLVFPGVDMLQKPMMKNQFPRENMISAKGLRSSELENPR
TADEVGKNSDEKYSAGFDLNACINAAAPHVCKIHDKSAPGESTLQFPNGSTHDASGLTSE
TVNFPESTTDTNCIDQLGVTSNDLQANDKIAVNTLGSPSDADEQTEDTDDPNASSLAVKS
IASEVQIEYGSAKQSLNSCDEASAQQSAEIIKHQSLGFLSELNVSSENVVAHDSVSIDCR
PLDANVIIDQDHQQLPVVGCISVSGERKLETDKVKSDSVFSQISSVVAGDMKQALTESIK
ANHILRETIITSSCNADQASPSAPQRAQNDDCINSSRQANGLDDHDIVLSPINTDCHSPC
VPFSDAPNKPDFPPCMSNGLCLSEDEMMSCKACVDDGPNLKDKPVSVGGSQICDAVFQVR
IESSEQPESDSQVHLVGVTNTNCNCEPLCNLSPGSGVALHCASGGGNSHGTPEVMVLSNK
AS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 000404
(1562 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2147391 - symbol:AT5G36740 species:3702 "Arabi... 1310 1.8e-161 2
TAIR|locus:2201021 - symbol:AT1G05380 "AT1G05380" species... 1415 7.0e-151 3
TAIR|locus:2832118 - symbol:AT5G36670 species:3702 "Arabi... 1182 5.9e-148 2
TAIR|locus:2086395 - symbol:ROS4 "AT3G14980" species:3702... 809 1.7e-82 2
TAIR|locus:2040550 - symbol:AT2G36720 "AT2G36720" species... 315 4.7e-29 3
TAIR|locus:2178828 - symbol:AT5G58610 "AT5G58610" species... 371 1.4e-28 3
TAIR|locus:2163961 - symbol:AT5G63900 "AT5G63900" species... 302 4.1e-24 2
TAIR|locus:504955937 - symbol:AT2G22795 "AT2G22795" speci... 133 4.1e-06 2
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 149 3.1e-05 1
UNIPROTKB|Q5JSK9 - symbol:HMGN5 "High mobility group nucl... 120 0.00021 1
TAIR|locus:2098443 - symbol:AT3G28770 "AT3G28770" species... 138 0.00022 2
UNIPROTKB|P82970 - symbol:HMGN5 "High mobility group nucl... 122 0.00040 1
TAIR|locus:2137544 - symbol:AT4G37820 "AT4G37820" species... 124 0.00076 1
>TAIR|locus:2147391 [details] [associations]
symbol:AT5G36740 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 UniGene:At.55161 IPI:IPI00544011
RefSeq:NP_568540.1 UniGene:At.55166 ProteinModelPortal:F4K4H9
SMR:F4K4H9 EnsemblPlants:AT5G36740.1 GeneID:833643
KEGG:ath:AT5G36740 OMA:IDTWTSG Uniprot:F4K4H9
Length = 1179
Score = 1310 (466.2 bits), Expect = 1.8e-161, Sum P(2) = 1.8e-161
Identities = 274/613 (44%), Positives = 379/613 (61%)
Query: 669 KLQETQQRKRCALLVRNSVEGEESNGDGFVAYDGKWTLLAWMIDTGTVPLNEKVQYWNQR 728
K +E RKRC R+S++ +S DG++ ++GK T+L WMID+ VPLN KVQ + +
Sbjct: 508 KREEKHSRKRCTPSARSSLKDVDSKEDGYILFEGKRTMLGWMIDSTIVPLNGKVQCMDCK 567
Query: 729 KTRVMLQGRIARDGIRCDCCSEIFTISKFDTHSKSKLCHPFQNLYFESGSSLLQCILDSW 788
KT ++L+G I ++GIRC+CC E+F++ F+ H+ PF++LY E G+SLLQC+ +S
Sbjct: 568 KTDILLEGIITKEGIRCNCCDEVFSVLDFEVHAGGNRNQPFKSLYLEGGNSLLQCLHESM 627
Query: 789 NKQDESKRKGFHFVNFDGEDPNXXXXXXXXXXXXXXXXXXXPSTFHQNCLDIKKFPSGKW 848
NKQ ES+ KG+HFV+F DPN PSTFHQ+CLDIKKFPSG W
Sbjct: 628 NKQSESQLKGYHFVDFGSGDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIKKFPSGAW 687
Query: 849 HCVYCSCQFCGRINESTCHVNDQDDSALSTLQICSLCEEK----Y------HQSCSQTDG 898
+C CSC+FC + +E+ H + S L +L C LCEEK Y HQ+C DG
Sbjct: 688 YCYNCSCKFCEK-DEAAKH----ETSTLPSLSSCRLCEEKCSKHYPHTLADHQACINQDG 742
Query: 899 AVQYEPSSLSFCGKKCQEIFERLEKLLGVKHDLEGGYTWSLVHRFDVSTDLSLSDVCQKV 958
V E S+ SFCGK CQE+FE L+ +GVKH L G++WS + RF++ ++++ D+ +K+
Sbjct: 743 TVPGERSTDSFCGKYCQELFEELQLFIGVKHPLPEGFSWSFLRRFELPSEVADCDISEKI 802
Query: 959 ECNARLAVALSVMDECFLPLPDHRSGINLIHNILYNFGSNFKRLNYKGFFTAILERDDEI 1018
NA++AVA SVMDECF PL DHRSG+NL+ NI+YNFGSNF RL++ F TA+LER DEI
Sbjct: 803 AYNAKMAVAFSVMDECFSPLVDHRSGVNLLQNIVYNFGSNFHRLDFSSFLTAVLERGDEI 862
Query: 1019 ISAASIRIHGKELAEMPFIGTRHMYRRQGMCRRLLTGIESALCSLNVEKLIIPAISELRE 1078
I+ ASIRIHG +LAEMPFIGTR+MYRRQGMCRRL+ GIESAL SL V+KL+IPA+ EL +
Sbjct: 863 IAVASIRIHGNQLAEMPFIGTRYMYRRQGMCRRLMDGIESALGSLKVDKLVIPAVPELID 922
Query: 1079 TWTSVFGFQPLEVSSKQKMRNMSLLVFPGVDMLQKPMMKNQFPRENMISAKGL--RSSEL 1136
TWTS FGF P+ S K+ ++N++LLVFPGVDML K ++K + + S GL + E+
Sbjct: 923 TWTSGFGFAPVNDSEKKTIKNLNLLVFPGVDMLGKSLVKEKITDSVVSSPNGLVLLAPEM 982
Query: 1137 ENPRTADEVGKNSDEKYSAGFDLNACINAAAPH----VCK----IHDKSAPGESTLQFPN 1188
P +E K + K SA A +P C + + ES L+ +
Sbjct: 983 TLPVDVEE-NKPEESKDSAHERNCATAGVESPSNPVDSCLKLTYVEEGDNDRESNLKLLD 1041
Query: 1189 GSTH---DASGLTSETVN-FPESTTDTNCIDQLGVTSNDLQ-ANDKIAVNTLGSPSDADE 1243
GS D LT +N P+ D++ DQ ++ DK ++ G A+
Sbjct: 1042 GSVEEKEDTKKLTDIDINSLPDEVDDSHA-DQSDTKEQEIDDKEDKTPLSDDGCEGKAEG 1100
Query: 1244 QTEDTDDPNASSL 1256
E P+++ +
Sbjct: 1101 TKESNQQPDSNKV 1113
Score = 284 (105.0 bits), Expect = 1.8e-161, Sum P(2) = 1.8e-161
Identities = 127/496 (25%), Positives = 197/496 (39%)
Query: 131 SENERGFDVHV----EGLRSGSISVKPE-DKFILGPESEVI---DKKRIL---FDLNDEI 179
+ ++GFD++V E I + E D + G VI DKK+++ + +
Sbjct: 4 TNEQKGFDLNVCASIEDFSESDIKAEGETDSLVDGNVENVIEIKDKKKVIEREILITRRV 63
Query: 180 IPFMDFGPDSVKEN-----IKTKENDAPINDECGEIGLDGNKRKRSRVYGEEL-GEDV-- 231
+ D V + +K K N E+ + + + EE+ G+D
Sbjct: 64 LRSGSVARDLVNSDKHCKAVKRKGNVVSGGSSVDEVKEEVKQECVKSLVPEEIRGDDFRS 123
Query: 232 VVKKRLKEDITAKNVGRVLRSRLGIKRGSEKESNQAEIEERGSNRVFDGSENERDVDMQM 291
VK K+D + G+ ++ KRG ++ + + N + + + +
Sbjct: 124 EVKVESKDD--RSDDGK--EEKVQRKRGRPRKFGMSS--QSDDNGLISNCKLRTSLGKKK 177
Query: 292 EVSNETNGAXXXXXXXXXXXXXXXMLENDESEGEQTKISKVKPGRPPKLNKIDESC---- 347
E+ + N LE+ E E +I + K+ D+ C
Sbjct: 178 ELVGDDNVEKLVGGSCFNKEKAEVKLEHGEY-AEDKEILGLDFRSQVKVEIKDDECGIVE 236
Query: 348 -EQRRKKVKDKRGRPRHKTHESGESDGEQRKRLKNKLGRPRKDGXXXXXXXXXXXXXXXX 406
+VK KRGRPR K S +SD E R KL R +
Sbjct: 237 LHDEELQVKRKRGRPR-KVQISSQSD-ESRPNTNCKLARTPE------LSSQSSVDRISL 288
Query: 407 XXXQGINEXXXXXXXXXXXXNGIRKSQRHTLAVGLKRDVPTYGLIPEK-RHGGTEFNAQR 465
+G G + R + KR P P+K R G +
Sbjct: 289 SRLRGRPPKTKETSVSLYIEKGPESNGRRMVR---KRGRPP---TPQKKRKSGMTDESDW 342
Query: 466 FAPDKKNSCAETGEAISRQTMKTVNQREKKCLETHQEETL----SKHGAKQLLRDRIVEL 521
A + C E SR ++ E+ E ++T S+ +K++L DRI++L
Sbjct: 343 KAKKRLKLCESPLE--SRHNNPLIDD-ERMIGEQRSKQTEAGGHSRSKSKKMLSDRILQL 399
Query: 522 LLAAGWKIEYRPRNGREYCDAVYVNPEGKTHWSITLAYSVLKNHYEQEGGSSDTSKTGFT 581
LL AGW +EYRPRNGR Y DAVY+NPEGKTHWS+T AY V K E S TG
Sbjct: 400 LLTAGWTVEYRPRNGRAYQDAVYLNPEGKTHWSVTKAYQVYKKQLESNPNDQKNSTTGSG 459
Query: 582 FTPIPEDELSILKKVI 597
F +PE++L +L++ I
Sbjct: 460 FGLLPEEDLHLLERTI 475
Score = 55 (24.4 bits), Expect = 2.8e-137, Sum P(2) = 2.8e-137
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 29 EKKNLFDLNDETTEKEDSGSTSPKETMEIK-EIDEKASDECGETGLGENDRNSSRVDCVV 87
+KK L + D+ EK GS KE E+K E E A D+ E LG + R+ +V+ +
Sbjct: 175 KKKEL--VGDDNVEKLVGGSCFNKEKAEVKLEHGEYAEDK--EI-LGLDFRSQVKVE--I 227
Query: 88 KED 90
K+D
Sbjct: 228 KDD 230
Score = 44 (20.5 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 574 DTSKTGFTFTPIPEDELSILKKV 596
DT +GF F P+ + E +K +
Sbjct: 922 DTWTSGFGFAPVNDSEKKTIKNL 944
Score = 39 (18.8 bits), Expect = 1.4e-135, Sum P(2) = 1.4e-135
Identities = 12/51 (23%), Positives = 26/51 (50%)
Query: 20 SERENEVNDEKKNLFDLNDETTE-KEDSGSTSPKETMEIKEIDE-KASDEC 68
S+ + E+ D++ + +L+DE + K G P++ + DE + + C
Sbjct: 221 SQVKVEIKDDECGIVELHDEELQVKRKRGR--PRKVQISSQSDESRPNTNC 269
>TAIR|locus:2201021 [details] [associations]
symbol:AT1G05380 "AT1G05380" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IC;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00249 EMBL:CP002684
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 EMBL:AC005106 HSSP:Q14839
IPI:IPI00532257 RefSeq:NP_001117233.1 RefSeq:NP_563736.3
UniGene:At.15326 ProteinModelPortal:Q9ZW00 SMR:Q9ZW00 PRIDE:Q9ZW00
EnsemblPlants:AT1G05380.1 EnsemblPlants:AT1G05380.2 GeneID:837039
KEGG:ath:AT1G05380 TAIR:At1g05380 InParanoid:Q9ZW00 OMA:RIRSSIK
PhylomeDB:Q9ZW00 ProtClustDB:CLSN2699134 Genevestigator:Q9ZW00
Uniprot:Q9ZW00
Length = 1138
Score = 1415 (503.2 bits), Expect = 7.0e-151, Sum P(3) = 7.0e-151
Identities = 293/663 (44%), Positives = 401/663 (60%)
Query: 501 QEETLSKHGA---KQLLRDRIVELLLAAGWKIEYRPRNGREYCDAVYVNPEGKTHWSITL 557
+EE + G KQ LR+RI +L AGW I+Y+PR + Y DAVYVNP G +WSI
Sbjct: 299 REERRGRRGGGTDKQRLRERIKGMLTDAGWTIDYKPRRNQSYLDAVYVNPSGTAYWSIIK 358
Query: 558 AYSVLKNHYEQEGGSSDTSKTGFTFTPIPEDELSILKKVIXXXXXXXXXXXXXXXLGTDG 617
AY L + EG + K + E+ ++ L + G+D
Sbjct: 359 AYDALLKQLKDEGVDARPRKDTAAVASVSEEIVNKLARKAKKTRSEMTKKWKQNSSGSDS 418
Query: 618 EIVTXXXXXXXXTN----SAASPHGKSQKRGIKGKP-----SVSEGGTSHNGM--SIPAR 666
E + + S+ GKS K+G G S+ +N S +
Sbjct: 419 ENKSEGGAYTDTSEERIRSSIKLGGKSTKKGRNGADWDELHKKSKRSLYYNNARPSCGSD 478
Query: 667 RHKLQETQQRK--RCALLVRNSVEGEESNGDGFVAYDGKWTLLAWMIDTGTVPLNEKVQY 724
H L + +K RC LLVR+S + + +GF Y GK TLL+W+I++G V L +KVQY
Sbjct: 479 SHYLHGRKTKKIGRCTLLVRSSKDKKNPAINGFNPYSGKRTLLSWLIESGVVQLRQKVQY 538
Query: 725 WNQRKTRVMLQGRIARDGIRCDCCSEIFTISKFDTHSKSKLCHPFQNLYFESGSSLLQCI 784
+R +VML+G I R+GI CDCCS+I T+S+F+ H+ SK C PFQN+Y ESG+SLLQC
Sbjct: 539 MRRRGAKVMLEGWITREGIHCDCCSKILTVSRFEIHAGSKSCQPFQNIYLESGASLLQCQ 598
Query: 785 LDSWNKQDESKRKGFHFVNFDGEDPNXXXXXXXXXXXXXXXXXXXPSTFHQNCLDIKKFP 844
+ +WN Q ++ H V+ DG+DPN PST+HQNCL ++ P
Sbjct: 599 VRAWNMQKDATNLALHQVDTDGDDPNDDACGICGDGGDLICCDGCPSTYHQNCLGMQVLP 658
Query: 845 SGKWHCVYCSCQFCGRINESTCHVNDQDDSALSTLQICSLCEEKYHQSCSQTDG-AVQYE 903
SG WHC C+C+FC ++ +D + +S L C +CE +YHQ C + VQ
Sbjct: 659 SGDWHCPNCTCKFC----DAAVASGGKDGNFISLLS-CGMCERRYHQLCLNDEAHKVQSF 713
Query: 904 PSSLSFCGKKCQEIFERLEKLLGVKHDLEGGYTWSLVHRFDVSTDLSLSDVCQKVECNAR 963
S+ SFCG KC E+FE+L+K LGVK ++EGGY+WSL+HR D +D + Q++E N++
Sbjct: 714 GSASSFCGPKCLELFEKLQKYLGVKTEIEGGYSWSLIHRVDTDSDTNSQMSAQRIENNSK 773
Query: 964 LAVALSVMDECFLPLPDHRSGINLIHNILYNFGSNFKRLNYKGFFTAILERDDEIISAAS 1023
LAV L++MDECFLP+ D RSG++LI N+LYN GSNF R+NY GF+TAILER DEIISAAS
Sbjct: 774 LAVGLAIMDECFLPIVDRRSGVDLIRNVLYNCGSNFNRINYTGFYTAILERGDEIISAAS 833
Query: 1024 IRIHGKELAEMPFIGTRHMYRRQGMCRRLLTGIESALCSLNVEKLIIPAISELRETWTSV 1083
+R HG +LAEMPFIGTRH+YRRQGMCRRL IESA+ SL VEKL+IPAI + WT
Sbjct: 834 LRFHGMQLAEMPFIGTRHIYRRQGMCRRLFDAIESAMRSLKVEKLVIPAIPDFLHAWTGN 893
Query: 1084 FGFQPLEVSSKQKMRNMSLLVFPGVDMLQKPMMKNQFPRENMIS--AKG-LRSSELENPR 1140
FGF PL+ S +++MR+++ LVFPG+DMLQKP++ EN+I+ A G SE+E +
Sbjct: 894 FGFTPLDDSVRKEMRSLNTLVFPGIDMLQKPLLHE----ENIIAPAAAGDAMISEVETEK 949
Query: 1141 TAD 1143
++
Sbjct: 950 KSE 952
Score = 49 (22.3 bits), Expect = 7.0e-151, Sum P(3) = 7.0e-151
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 336 RPPKLNKIDESCEQRRKKVKDKRGRPRHKTHESGESDGEQR-KRLKNKLGRPRKD 389
RPP K E K ++ ES ESD ++ KR K++ +P+K+
Sbjct: 228 RPPSSRKAQRR-ENVVVKPPFRKSNNVDNNSESEESDMSRKSKRKKSEYSKPKKE 281
Score = 48 (22.0 bits), Expect = 8.9e-151, Sum P(3) = 8.9e-151
Identities = 23/101 (22%), Positives = 40/101 (39%)
Query: 427 NGIRK----SQRHTLAVGLK-RDVPTYGLIPEKRHGGTEFNAQRFAPDKKNSCAETGEAI 481
NG+ K ++ +TLA + RD Y P R N P +K++ +
Sbjct: 200 NGVLKVKVNNKTNTLAASINPRDAEIYERPPSSRKAQRRENVVVKPPFRKSNNVDNNSES 259
Query: 482 SRQTMKTVNQREKKCLETHQEE--TLSKHGAKQLLRDRIVE 520
M ++R+K ++E T SK +L+ + E
Sbjct: 260 EESDMSRKSKRKKSEYSKPKKEFNTKSKSTFPELVNPDVRE 300
Score = 45 (20.9 bits), Expect = 7.0e-151, Sum P(3) = 7.0e-151
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 108 SGNDKESNKIEIEEKDRNTGCDGSENERG-FDVHVEGLRSGS 148
SG+ + NK++I E D G D + R FD G+R S
Sbjct: 101 SGSFMKMNKLDIFEFDEYDGFDSANLMRKRFDNGSVGVRGRS 142
Score = 41 (19.5 bits), Expect = 2.3e-150, Sum P(3) = 2.3e-150
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 332 VKPGRPPKLNKIDESCEQRRKKVKDKRGRPRHKTH----ESGESDGEQRKRLKNKL 383
+KP PP+ + +D ++K KR R H + + E+ G K NKL
Sbjct: 59 MKP--PPRRSGVDRKTLGAKEKFVRKRDRVEHDRNGYVRRNNEASGSFMKM--NKL 110
Score = 39 (18.8 bits), Expect = 7.9e-150, Sum P(3) = 7.9e-150
Identities = 19/75 (25%), Positives = 32/75 (42%)
Query: 197 KENDAPINDECGEIGLDG-NKRKRSRVYGEELGEDVVVKKRLKEDITAKNVGRVLRSRLG 255
K N+ N E E + +KRK+S Y + E K ++ +V R R G
Sbjct: 249 KSNNVDNNSESEESDMSRKSKRKKSE-YSKPKKEFNTKSKSTFPELVNPDVREERRGRRG 307
Query: 256 IKRGSEKESNQAEIE 270
G++K+ + I+
Sbjct: 308 --GGTDKQRLRERIK 320
>TAIR|locus:2832118 [details] [associations]
symbol:AT5G36670 species:3702 "Arabidopsis thaliana"
[GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001965 InterPro:IPR017956
InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016 SMART:SM00249
SMART:SM00384 EMBL:CP002688 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 InterPro:IPR020478 PRINTS:PR00929 Gene3D:3.40.630.30
InterPro:IPR016181 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 IPI:IPI00527539 RefSeq:NP_568537.1 UniGene:At.55161
ProteinModelPortal:F4K4G6 SMR:F4K4G6 EnsemblPlants:AT5G36670.1
GeneID:833632 KEGG:ath:AT5G36670 ArrayExpress:F4K4G6 Uniprot:F4K4G6
Length = 1193
Score = 1182 (421.1 bits), Expect = 5.9e-148, Sum P(2) = 5.9e-148
Identities = 259/611 (42%), Positives = 364/611 (59%)
Query: 669 KLQETQQRKRCALLVRNSVEGEESNGDGFVAYDGKWTLLAWMIDTGTVPLNEKVQYWNQR 728
K +E RKRC R+S++ +S DG++ ++GK T+L WMID+ VPLN KVQ + +
Sbjct: 508 KREEKHSRKRCTPSARSSLKDVDSKEDGYILFEGKRTMLGWMIDSTIVPLNGKVQCMDCK 567
Query: 729 KTRVMLQGRIARDGIRCDCCSEIFTISKFDTHSKSKLCHPFQNLYFESGSSLLQCILDSW 788
KT ++L+G I ++GIRC+CC E+F++ F+ H+ PF++LY E G+SLLQC+ +S
Sbjct: 568 KTDILLEGIITKEGIRCNCCDEVFSVLDFEVHAGGNRNQPFKSLYLEGGNSLLQCLHESM 627
Query: 789 NKQDESKRKGFHFVNFDGEDPNXXXXXXXXXXXXXXXXXXXPSTFHQNCLDIKKFPSGKW 848
NKQ ES+ KG+HFV+F DPN PSTFHQ+CLDIKKFPSG W
Sbjct: 628 NKQSESQLKGYHFVDFGSGDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIKKFPSGAW 687
Query: 849 HCVYCSCQFCGRINESTCHVNDQDDSALSTLQICSLCEEK----Y------HQSCSQTDG 898
+C CSC+FC + +E+ H + S L +L C LCEEK Y HQ+C DG
Sbjct: 688 YCYNCSCKFCEK-DEAAKH----ETSTLPSLSSCRLCEEKCSKHYPHTLADHQACINQDG 742
Query: 899 AVQYEPSSLSFCGKKCQEIFERLEKLLGVKHDLEGGYTWSLVHRFDVSTDLSLSDVCQKV 958
V E S+ SFCGK CQE+FE L+ +GVKH L G++WS + RF++ ++++ D+ +K+
Sbjct: 743 TVPGERSTDSFCGKYCQELFEELQLFIGVKHPLPEGFSWSFLRRFELPSEVADCDISEKI 802
Query: 959 ECNARLAVALSVMDECFLPLPDHRSGINLIHNILYNFGSNFKRLNYKGFFTAILERDDEI 1018
NA++AVA SVMDECF PL DHRSG+NL+ NI+YNFGSNF RL++ F TA+LER DEI
Sbjct: 803 AYNAKMAVAFSVMDECFSPLVDHRSGVNLLQNIVYNFGSNFHRLDFSSFLTAVLERGDEI 862
Query: 1019 ISAASIRIHGKELAEMPFIGTRHMYRRQGMCRRLLTGIESALCSLNVEKLIIPAISE-LR 1077
I+ ASIRIHG +LAEMPFIGTR+MYRRQGMCRRL+ GIES + + ++ + AISE L
Sbjct: 863 IAVASIRIHGNQLAEMPFIGTRYMYRRQGMCRRLMDGIESFVAYFS--QMFL-AISEVLL 919
Query: 1078 ETWT----------------SVFGFQPLEVSSKQKMRNMSLLVFPGVDMLQKPMMKNQFP 1121
+ W S FGF P+ S K+ ++N++LLVFPGVDML K ++K +
Sbjct: 920 DVWQFCCYPACFGDGPFCFFSGFGFAPVNDSEKKTIKNLNLLVFPGVDMLGKSLVKEKIT 979
Query: 1122 RENMISAKGL--RSSELENPRTADEVGKNSDEKYSAGFDLNACINAAAPHVCKIHDKSAP 1179
+ S GL + E+ P +E K + K SA + N C A + S P
Sbjct: 980 DSVVSSPNGLVLLAPEMTLPVDVEE-NKPEESKDSA-HERN-CATAG------VESPSNP 1030
Query: 1180 GESTLQ--FPNGSTHDASGLTSETVNFPESTTDTNCIDQLGVTSNDLQANDKIAVNTLGS 1237
+S L+ + +D E DT + + + S + +D A +
Sbjct: 1031 VDSCLKLTYVEEGDNDRESNLKLLDGSVEEKEDTKKLTDIDINSLPDEVDDSHADQSDTK 1090
Query: 1238 PSDADEQTEDT 1248
+ D++ + T
Sbjct: 1091 EQEIDDKEDKT 1101
Score = 284 (105.0 bits), Expect = 5.9e-148, Sum P(2) = 5.9e-148
Identities = 127/496 (25%), Positives = 197/496 (39%)
Query: 131 SENERGFDVHV----EGLRSGSISVKPE-DKFILGPESEVI---DKKRIL---FDLNDEI 179
+ ++GFD++V E I + E D + G VI DKK+++ + +
Sbjct: 4 TNEQKGFDLNVCASIEDFSESDIKAEGETDSLVDGNVENVIEIKDKKKVIEREILITRRV 63
Query: 180 IPFMDFGPDSVKEN-----IKTKENDAPINDECGEIGLDGNKRKRSRVYGEEL-GEDV-- 231
+ D V + +K K N E+ + + + EE+ G+D
Sbjct: 64 LRSGSVARDLVNSDKHCKAVKRKGNVVSGGSSVDEVKEEVKQECVKSLVPEEIRGDDFRS 123
Query: 232 VVKKRLKEDITAKNVGRVLRSRLGIKRGSEKESNQAEIEERGSNRVFDGSENERDVDMQM 291
VK K+D + G+ ++ KRG ++ + + N + + + +
Sbjct: 124 EVKVESKDD--RSDDGK--EEKVQRKRGRPRKFGMSS--QSDDNGLISNCKLRTSLGKKK 177
Query: 292 EVSNETNGAXXXXXXXXXXXXXXXMLENDESEGEQTKISKVKPGRPPKLNKIDESC---- 347
E+ + N LE+ E E +I + K+ D+ C
Sbjct: 178 ELVGDDNVEKLVGGSCFNKEKAEVKLEHGEY-AEDKEILGLDFRSQVKVEIKDDECGIVE 236
Query: 348 -EQRRKKVKDKRGRPRHKTHESGESDGEQRKRLKNKLGRPRKDGXXXXXXXXXXXXXXXX 406
+VK KRGRPR K S +SD E R KL R +
Sbjct: 237 LHDEELQVKRKRGRPR-KVQISSQSD-ESRPNTNCKLARTPE------LSSQSSVDRISL 288
Query: 407 XXXQGINEXXXXXXXXXXXXNGIRKSQRHTLAVGLKRDVPTYGLIPEK-RHGGTEFNAQR 465
+G G + R + KR P P+K R G +
Sbjct: 289 SRLRGRPPKTKETSVSLYIEKGPESNGRRMVR---KRGRPP---TPQKKRKSGMTDESDW 342
Query: 466 FAPDKKNSCAETGEAISRQTMKTVNQREKKCLETHQEETL----SKHGAKQLLRDRIVEL 521
A + C E SR ++ E+ E ++T S+ +K++L DRI++L
Sbjct: 343 KAKKRLKLCESPLE--SRHNNPLIDD-ERMIGEQRSKQTEAGGHSRSKSKKMLSDRILQL 399
Query: 522 LLAAGWKIEYRPRNGREYCDAVYVNPEGKTHWSITLAYSVLKNHYEQEGGSSDTSKTGFT 581
LL AGW +EYRPRNGR Y DAVY+NPEGKTHWS+T AY V K E S TG
Sbjct: 400 LLTAGWTVEYRPRNGRAYQDAVYLNPEGKTHWSVTKAYQVYKKQLESNPNDQKNSTTGSG 459
Query: 582 FTPIPEDELSILKKVI 597
F +PE++L +L++ I
Sbjct: 460 FGLLPEEDLHLLERTI 475
Score = 55 (24.4 bits), Expect = 9.2e-124, Sum P(2) = 9.2e-124
Identities = 23/63 (36%), Positives = 34/63 (53%)
Query: 29 EKKNLFDLNDETTEKEDSGSTSPKETMEIK-EIDEKASDECGETGLGENDRNSSRVDCVV 87
+KK L + D+ EK GS KE E+K E E A D+ E LG + R+ +V+ +
Sbjct: 175 KKKEL--VGDDNVEKLVGGSCFNKEKAEVKLEHGEYAEDK--EI-LGLDFRSQVKVE--I 227
Query: 88 KED 90
K+D
Sbjct: 228 KDD 230
Score = 39 (18.8 bits), Expect = 4.5e-122, Sum P(2) = 4.5e-122
Identities = 12/51 (23%), Positives = 26/51 (50%)
Query: 20 SERENEVNDEKKNLFDLNDETTE-KEDSGSTSPKETMEIKEIDE-KASDEC 68
S+ + E+ D++ + +L+DE + K G P++ + DE + + C
Sbjct: 221 SQVKVEIKDDECGIVELHDEELQVKRKRGR--PRKVQISSQSDESRPNTNC 269
Score = 37 (18.1 bits), Expect = 1.5e-18, Sum P(2) = 1.5e-18
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 578 TGFTFTPIPEDELSILKKV 596
+GF F P+ + E +K +
Sbjct: 940 SGFGFAPVNDSEKKTIKNL 958
>TAIR|locus:2086395 [details] [associations]
symbol:ROS4 "AT3G14980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0007267 "cell-cell signaling"
evidence=RCA] [GO:0009616 "virus induced gene silencing"
evidence=RCA] [GO:0010267 "production of ta-siRNAs involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA] [GO:0010385
"double-stranded methylated DNA binding" evidence=IPI] [GO:0042393
"histone binding" evidence=IDA] [GO:0043971 "histone H3-K18
acetylation" evidence=IDA] [GO:0043972 "histone H3-K23 acetylation"
evidence=IDA] [GO:0044030 "regulation of DNA methylation"
evidence=IMP] [GO:0044154 "histone H3-K14 acetylation"
evidence=IDA] [GO:0080188 "RNA-directed DNA methylation"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001739 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 PROSITE:PS51186 SMART:SM00184
SMART:SM00249 GO:GO:0009506 GO:GO:0005634 EMBL:CP002686
GO:GO:0046872 GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181
SUPFAM:SSF55729 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0042393 Gene3D:3.30.890.10
GO:GO:0044030 GO:GO:0044154 GO:GO:0004402 GO:GO:0010385
GO:GO:0043971 UniGene:At.53322 UniGene:At.73310 IPI:IPI00540986
RefSeq:NP_188116.1 ProteinModelPortal:F4IXE7 SMR:F4IXE7
PRIDE:F4IXE7 EnsemblPlants:AT3G14980.1 GeneID:820727
KEGG:ath:AT3G14980 OMA:AECNSKL GO:GO:0043972 GO:GO:0080188
Uniprot:F4IXE7
Length = 1189
Score = 809 (289.8 bits), Expect = 1.7e-82, Sum P(2) = 1.7e-82
Identities = 193/616 (31%), Positives = 315/616 (51%)
Query: 652 SEGGTSHNGMSIPARRHKLQETQQRKR--CALLVRNSVEGEESNGDGFVAYDGKWTLLAW 709
++G S + ++ K + ++ R C LL R+S E G + G T+L+W
Sbjct: 565 NKGKFSRSSQKKKTQKPKARTKKRNNRGGCRLLPRSSSNVENHFFQGNWSILGPRTVLSW 624
Query: 710 MIDTGTVPLNEKVQYWNQRKTRVMLQGRIARDGIRCDCCSEIFTISKFDTHSKSKLCHPF 769
+I T + +E +Q + V+ G + +DG+ C CC++ ++S+F H+ P
Sbjct: 625 LIATKVISRDEVIQLRDPDDDTVVKTGLVTKDGVVCTCCNKTVSLSEFKNHAGFNQNCPC 684
Query: 770 QNLYFESGSSLLQCILDSWNKQDESKRKGFHFVNFDGEDPNXXXXXXXXXXXXXXXXXXX 829
NL+ SG C L++W+ + +++R G+ +DPN
Sbjct: 685 LNLFMGSGKPFASCQLEAWSAEYKARRNGWRLEKASDDDPNDDSCGVCGDGGELICCDNC 744
Query: 830 PSTFHQNCLDIKKFPSGKWHCVYCSCQFCGRINESTCHVNDQDDSALSTLQICSLCEEKY 889
PSTFHQ CL ++ P G W+C C+C C + QD CS C KY
Sbjct: 745 PSTFHQACLSMQVLPEGSWYCSSCTCWICSELVSDNAE-RSQDFK-------CSQCAHKY 796
Query: 890 HQSCSQTDGAVQYEPSSLSFCGKKCQEIFERLEKLLGVKHDLEGGYTWSLVHRFDVSTDL 949
H +C Q + FCGK C++++ L +G+ + G +WS++ F +
Sbjct: 797 HGTCLQGISKRRKLFPETYFCGKNCEKVYNGLSSRVGIINPNADGLSWSILKCFQEDGMV 856
Query: 950 -SLSDVCQKVECNARLAVALSVMDECFLPLPDHRSGINLIHNILYNFGSNFKRLNYKGFF 1008
S + K ECN++LAVALS+M+E FL + D R+GI++I ++LYN+GS F RL++ GF+
Sbjct: 857 HSARRLALKAECNSKLAVALSIMEESFLSMVDPRTGIDMIPHVLYNWGSTFARLDFDGFY 916
Query: 1009 TAILERDDEIISAASIRIHGKELAEMPFIGTRHMYRRQGMCRRLLTGIESALCSLNVEKL 1068
T ++E+DD +IS ASIR+HG +AEMP + T YRRQGMCR L+ IE L SL VEKL
Sbjct: 917 TVVVEKDDVMISVASIRVHGVTIAEMPLVATCSKYRRQGMCRILVAAIEEMLMSLKVEKL 976
Query: 1069 IIPAISELRETWTSVFGFQPLEVSSKQKMRNMSLLVFPGVDMLQKPMMKNQFPRENMISA 1128
++ A+ L ETWT FGF+P++ + ++ ++L+VFPG +L+K + ++ P +
Sbjct: 977 VVAALPSLVETWTEGFGFKPMDDEERDALKRINLMVFPGTTLLKKTLYESTKPS----TM 1032
Query: 1129 KGL-RSSELENPRTADEVGKNSDEKYSAGFDLNACINAAAPHV-CKIHDKSAPGESTLQF 1186
KG+ S E NP + + +K AG ++ + + V D+ +PG F
Sbjct: 1033 KGVCLSKERNNPSNKEADLEPGLDK--AGSPMSTQVESCDQMVPAGSDDEPSPG-----F 1085
Query: 1187 PNGSTHDASGLTSETVNFPESTTDTNCIDQLGVTSNDLQANDKIAVNTLGSPSDADEQTE 1246
P D + TSET N P + D+N D+ T+ ++ S E+ +
Sbjct: 1086 PVPLGADQTEPTSETEN-P--SRDSNANDRPNKTTVVSIGEEEEEECLQKDVSKLSEEGK 1142
Query: 1247 DTDDPNASSLAVKSIA 1262
+T ++SS A++ ++
Sbjct: 1143 ETTRASSSSAALEEVS 1158
Score = 94 (38.1 bits), Expect = 1.7e-82, Sum P(2) = 1.7e-82
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 507 KHGAKQLLRDRIVELLLAAGWKIEYRPRN-GREYCDAVYVNPEGKTHWSITLAYSVL 562
K + LL + ++L AA WKIE R R+ GR++ D Y++PEG+ A+ L
Sbjct: 236 KEDPRPLLYKYVCKVLTAARWKIEKRERSAGRKHVDTFYISPEGRKFREFGSAWKAL 292
Score = 48 (22.0 bits), Expect = 1.2e-77, Sum P(2) = 1.2e-77
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 86 VVKEDSKVKNAGTVFWSGLGIKSGNDKESNKIEIEEKDRN 125
++ D K+ + GT W+G+ +D ++IEE +N
Sbjct: 295 ILLADRKLMDTGTKKWTGIN-DFWSDLSLTLLDIEENMKN 333
>TAIR|locus:2040550 [details] [associations]
symbol:AT2G36720 "AT2G36720" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009630 "gravitropism" evidence=RCA]
InterPro:IPR001841 InterPro:IPR001965 InterPro:IPR019787
Pfam:PF00628 PROSITE:PS50016 SMART:SM00184 SMART:SM00249
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016746 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 HSSP:Q14839 eggNOG:NOG145066 EMBL:AY093116
EMBL:BT008812 IPI:IPI00537974 RefSeq:NP_850270.1 UniGene:At.37517
ProteinModelPortal:Q8RWG0 SMR:Q8RWG0 PaxDb:Q8RWG0 PRIDE:Q8RWG0
EnsemblPlants:AT2G36720.1 GeneID:818244 KEGG:ath:AT2G36720
TAIR:At2g36720 HOGENOM:HOG000149118 InParanoid:Q8RWG0 OMA:DSCPRAF
PhylomeDB:Q8RWG0 ProtClustDB:CLSN2680077 Genevestigator:Q8RWG0
Uniprot:Q8RWG0
Length = 1007
Score = 315 (115.9 bits), Expect = 4.7e-29, Sum P(3) = 4.7e-29
Identities = 86/257 (33%), Positives = 128/257 (49%)
Query: 878 TLQICSLCEEKYHQSCSQTDGAVQYE--PSSLSFCGKKCQEIFERLEKLL--GVKH--DL 931
T+ IC CE++YH C + V + P FC C I L+KLL G + D
Sbjct: 723 TIIICDQCEKEYHIGCLSSQNIVDLKELPKGNWFCSMDCTRINSTLQKLLLGGAEKLSDS 782
Query: 932 EGGYTWSLVHRFDVST----DLSLSDVCQKV---ECNARLAVALSVMDECFLPLPDHRSG 984
G + R DV + D+ + KV E L+ AL++ +CF P+ D SG
Sbjct: 783 SLGIIQTKQERNDVYSISDLDIRWRLISGKVTSPESRMLLSQALAIFHDCFDPIVDPLSG 842
Query: 985 INLIHNILYNFGSNFKRLNYKGFFTAILERDDEIISAASIRIHGKELAEMPFIGTRHMYR 1044
NLI ++Y G + +Y G A+L + ++SA +R+ G+E+AE+P + TR R
Sbjct: 843 SNLIPRMVY--GKTMQGQDYGGICCAVLTVNATVVSAGLLRVFGREVAELPLVATRMCSR 900
Query: 1045 RQGMCRRLLTGIESALCSLNVEKLIIPAISELRETWTSVFGFQPL--EVSSKQKMRNMSL 1102
+G + L + IE L SLNVE +++PA E W + FGF+ L E SK +
Sbjct: 901 EKGYFQLLFSCIEKLLSSLNVESIVVPAAEEAEPLWMNKFGFRKLAPEQLSKYIKICYQM 960
Query: 1103 LVFPGVDMLQKPMMKNQ 1119
+ F G MLQKP+ +Q
Sbjct: 961 VRFKGASMLQKPVDSHQ 977
Score = 111 (44.1 bits), Expect = 4.7e-29, Sum P(3) = 4.7e-29
Identities = 48/206 (23%), Positives = 74/206 (35%)
Query: 710 MIDTGTVPLNEKVQYWNQRKTRVMLQGRIARDGIRCDCCSEIFTISKFDTHSK-SKLCHP 768
+ D G +P ++ Y+ + + +L G GI C CC + S F+ H+ + P
Sbjct: 527 VFDRGGLPEGTELGYY--ARGQKLLGGYKMGAGIYCYCCKCEVSPSLFEAHAGWASRRKP 584
Query: 769 FQNLYFESGSSLLQCILDSWNKQDESKRKGFHFVNFDGEDPNXXXXXXXXXXXXXXXXXX 828
+ +Y +G SL + W RK + D N
Sbjct: 585 YFYIYTSNGVSLHE-----WATTFSHGRK------YSAND-NNDLCVICADGGNLLLCDS 632
Query: 829 XPSTFHQNCLDIKKFPSGKWHCVYCSCQFCGRINESTCHVNDQDDSALSTL----QICSL 884
P FH C+ + P G WHC YC +F I +VN L + Q+
Sbjct: 633 CPRAFHIECVSLPSIPRGNWHCKYCENKFTSEI-AGEYNVNSSAVGQLEGVDPVDQLAGR 691
Query: 885 CEEKYHQSCSQTDGAVQYEPSSLSFC 910
C ++T+G V S FC
Sbjct: 692 CIRVVKNMEAETNGCVLCSGSD--FC 715
Score = 80 (33.2 bits), Expect = 7.6e-26, Sum P(3) = 7.6e-26
Identities = 26/85 (30%), Positives = 40/85 (47%)
Query: 710 MIDTGTVPLNEKVQYWNQRKTRVM-LQGRIARDGIRCDCCS----EIFTISKFDTHSKSK 764
+ +TG + V Y K++ L+G I GI C C S + + SKF+ H+ +
Sbjct: 267 LFETGLLD-GLSVVYMGTVKSQAFPLRGIIRDGGILCSCSSCDWANVISTSKFEIHACKQ 325
Query: 765 LCHPFQNLYFESGSSLLQCILDSWN 789
Q + FE+G SLL + S N
Sbjct: 326 YRRASQYICFENGKSLLDVLNISRN 350
Score = 42 (19.8 bits), Expect = 4.7e-29, Sum P(3) = 4.7e-29
Identities = 13/59 (22%), Positives = 25/59 (42%)
Query: 184 DFGPDSVKENIKTKENDAPINDECGEIGLDGNKRKRSRVYGEELGEDVVVKKRLKEDIT 242
D P+S ++ ++ ECGE G D ++ R+ ++ +V + K T
Sbjct: 4 DLVPESNSSVWQSPVKRLAVDGECGEAG-DRSRTSCKRIKTTQVNGFIVYTRTRKTKFT 61
Score = 39 (18.8 bits), Expect = 9.7e-29, Sum P(3) = 9.7e-29
Identities = 11/47 (23%), Positives = 21/47 (44%)
Query: 58 KEIDEKASDECGETGLGENDRNSSRVDCVVKEDSKVKNAGTVFWSGL 104
+ ++ A + G GL E + S D + S+ + +F +GL
Sbjct: 226 ENVEVLAEPDFGREGLDEQSHSVSLADKSILIRSRPETVRDLFETGL 272
>TAIR|locus:2178828 [details] [associations]
symbol:AT5G58610 "AT5G58610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] [GO:0042991
"transcription factor import into nucleus" evidence=RCA]
InterPro:IPR001965 InterPro:IPR019787 Pfam:PF00628 PROSITE:PS50016
SMART:SM00249 INTERPRO:IPR008395 EMBL:CP002688 GO:GO:0046872
GO:GO:0008270 Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 Pfam:PF05641 InterPro:IPR014002
SMART:SM00743 IPI:IPI00519073 RefSeq:NP_200669.1 UniGene:At.55614
ProteinModelPortal:F4KGA3 SMR:F4KGA3 EnsemblPlants:AT5G58610.1
GeneID:835975 KEGG:ath:AT5G58610 OMA:RITQDWN Uniprot:F4KGA3
Length = 1065
Score = 371 (135.7 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
Identities = 86/233 (36%), Positives = 136/233 (58%)
Query: 886 EEKYHQSCSQTDGAVQYEPSSLSFCGKKCQEIFERLEKLLGVKHDLEGGYTWSLVHRFDV 945
EEK+ SC Q + ++Y PS L + G C + L+K+LG K SL
Sbjct: 755 EEKFI-SCKQCE--LKYHPSCLRYDGA-C----DSLDKILGEKWFCSKDCEESLEPNM-Y 805
Query: 946 STDLSLSDVCQKVECNARLAVALSVMDECFLPLPDHRSGINLIHNILYNFGSNFKRLNYK 1005
D S + + C L+VAL VM E F P+ G +L +++++ S FKRLN+
Sbjct: 806 GDDASKIEAAAENHCI--LSVALDVMHELFEPVKRPHGGRDLAEDVIFSRWSKFKRLNFS 863
Query: 1006 GFFTAILERDDEIISAASIRIHGKELAEMPFIGTRHMYRRQGMCRRLLTGIESALCSLNV 1065
GF+T +LER++E++S A++RI GK++AEMPFIGTR +R++GMCR L+ +E L L V
Sbjct: 864 GFYTVLLERNNELVSVATVRILGKKVAEMPFIGTRFQHRQRGMCRVLINELEKVLIDLGV 923
Query: 1066 EKLIIPAISELRETWTSVFGFQPLEVSSKQKMRNMSLLVFPGVDMLQKPMMKN 1118
E+L++PA+ + TW + FGF + +S ++ +LL F + +K ++K+
Sbjct: 924 ERLVLPAVPCVLNTWINSFGFTKMTISERKNFLKFTLLEFGRTILCEKILIKS 976
Score = 333 (122.3 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 68/218 (31%), Positives = 106/218 (48%)
Query: 706 LLAWMIDTGTVPLNEKVQYWNQRKTRVMLQGRIARDGIRCDCCSEIFTISKFDTHSKSKL 765
+L+W++D V E ++ NQ+ T V +G++ R+GI+C CC +FTI+ F+ H+
Sbjct: 590 ILSWLMDNNVVLPRENIRCCNQKDTTVRKEGKLTREGIKCSCCRRVFTINGFEVHANGAS 649
Query: 766 CHPFQNLYFESGSSLLQCILDSWNKQDESKRKGFHFVNF-DGEDPNXXXXXXXXXXXXXX 824
C N++ + G SLL+C ++++ K+ +++ + GE N
Sbjct: 650 CSGAANIFLDDGRSLLECQVEAYKKRKKAQPPDMLKMKLRQGE--NDVFCSVCHYGGKLI 707
Query: 825 XXXXXPSTFHQNCLDIKKFPSGKWHCVYCSCQFCGRINESTCHVNDQDDSALSTLQICSL 884
PS FH NCL ++ P G W C C C CG+ T N +++ +S C
Sbjct: 708 LCDGCPSAFHANCLGLEDVPDGDWFCQSCCCGACGQFFLKTTSTNAKEEKFIS----CKQ 763
Query: 885 CEEKYHQSCSQTDGAVQYEPSSLS---FCGKKCQEIFE 919
CE KYH SC + DGA L FC K C+E E
Sbjct: 764 CELKYHPSCLRYDGACDSLDKILGEKWFCSKDCEESLE 801
Score = 51 (23.0 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
Identities = 19/65 (29%), Positives = 29/65 (44%)
Query: 194 IKTKENDAPINDECGEIGLDGNKRKRSRVYGEELGEDVVVKKRLKEDITAKNVGRVLRSR 253
+K+K P DE +GL R R + + D+ K +T++ RVLRSR
Sbjct: 519 LKSKRKQTPKKDEV-IVGLQNVNRSMRRGHTSKKLMDI------KNRVTSRGKTRVLRSR 571
Query: 254 LGIKR 258
+R
Sbjct: 572 KRAQR 576
Score = 41 (19.5 bits), Expect = 1.6e-27, Sum P(3) = 1.6e-27
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 136 GFDVHVEGLR-SGSISVKPED-KFILGPESEVIDKKRILFDLNDEIIPFMDFGPDSVKEN 193
GF+VH G SG+ ++ +D + +L + E K++ + P PD +K
Sbjct: 640 GFEVHANGASCSGAANIFLDDGRSLLECQVEAYKKRK-------KAQP-----PDMLKMK 687
Query: 194 IKTKEND 200
++ END
Sbjct: 688 LRQGEND 694
Score = 40 (19.1 bits), Expect = 1.4e-28, Sum P(3) = 1.4e-28
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 45 DSGSTSPKETMEIKEIDEKASDEC 68
D GS + ET+++ +I E D+C
Sbjct: 60 DDGSGNLVETVDVSDIVE-GLDDC 82
>TAIR|locus:2163961 [details] [associations]
symbol:AT5G63900 "AT5G63900" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0008080
"N-acetyltransferase activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000182
InterPro:IPR001965 InterPro:IPR019787 PROSITE:PS50016
PROSITE:PS51186 SMART:SM00184 SMART:SM00249 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.40.630.30 InterPro:IPR016181 SUPFAM:SSF55729 EMBL:AB007646
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0008080 HSSP:Q14839 EMBL:AB493810
IPI:IPI00518981 RefSeq:NP_201195.1 UniGene:At.55695
ProteinModelPortal:Q9FMZ9 SMR:Q9FMZ9 EnsemblPlants:AT5G63900.1
GeneID:836510 KEGG:ath:AT5G63900 TAIR:At5g63900 eggNOG:NOG244493
HOGENOM:HOG000152567 InParanoid:Q9FMZ9 OMA:NSKLMAC PhylomeDB:Q9FMZ9
ProtClustDB:CLSN2914816 Genevestigator:Q9FMZ9 Uniprot:Q9FMZ9
Length = 557
Score = 302 (111.4 bits), Expect = 4.1e-24, Sum P(2) = 4.1e-24
Identities = 73/258 (28%), Positives = 129/258 (50%)
Query: 866 CHV-NDQDDSALSTLQICSLCEEKYHQSCSQTDGAVQYEPSSLS-FCGKKCQEIFERLEK 923
C + + A S L C C+ ++H +C + D + SS FC +C +F LE
Sbjct: 301 CDICGSMESPANSKLMACEQCQRRFHLTCLKEDSCIV---SSRGWFCSSQCNRVFSALEN 357
Query: 924 LLGVKHDL--EGGYTWSLVHRFDVSTDLSLSDVCQKVECNARLAVALSVMDECFLPLPDH 981
LLG K + +G W+L+ + + ++L A+ ++ + F P D
Sbjct: 358 LLGSKIAVGNDGDLVWTLMRAPNEGEHYDDEQI-------SKLESAVEILHQGFEPTNDV 410
Query: 982 RSGINLIHNILYNFGSNFKRLNYKGFFTAILERDDEIISAASIRIHGKELAEMPFIGTRH 1041
SG +L+ ++Y + + +GF+T ++ER +E I+ A++R+ K++ E+P + T
Sbjct: 411 FSGRDLVEELIYR--KDRTGVG-RGFYTVLIERKNEPITVAAVRVD-KDVVEIPLVATLS 466
Query: 1042 MYRRQGMCRRLLTGIESALCSLNVEKLIIPAISELRETWTSVFGFQPLEVSSKQKMRNMS 1101
YRR GMCR L+ +E + + V +L++PA E+ TWT FGF + S + ++
Sbjct: 467 SYRRSGMCRVLMDELEKQMSQMGVCRLVLPAAKEVVTTWTERFGFSVMNSSERLELVKHG 526
Query: 1102 LLVFPGVDMLQKPMMKNQ 1119
+L F G M K + K +
Sbjct: 527 MLDFVGTIMCHKFLQKER 544
Score = 169 (64.5 bits), Expect = 5.7e-09, Sum P(3) = 5.7e-09
Identities = 45/168 (26%), Positives = 72/168 (42%)
Query: 830 PSTFHQNCLDIKKFPSGK-WHCVYCSCQFCGRINESTCHVNDQDDSALSTLQICSLCEEK 888
PS FH CL + P W C C C CG + + A S L C C+ +
Sbjct: 275 PSAFHHACLGLSSLPEEDLWFCPCCCCDICGSM----------ESPANSKLMACEQCQRR 324
Query: 889 YHQSCSQTDGAVQYEPSSLS-FCGKKCQEIFERLEKLLGVKHDL--EGGYTWSLVHRFDV 945
+H +C + D + SS FC +C +F LE LLG K + +G W+L+ +
Sbjct: 325 FHLTCLKEDSCIV---SSRGWFCSSQCNRVFSALENLLGSKIAVGNDGDLVWTLMRAPNE 381
Query: 946 STDLSLSDVCQKVECNARLAVALSVMDECFLPLPDHRSGINLIHNILY 993
+ ++L A+ ++ + F P D SG +L+ ++Y
Sbjct: 382 GEHYDDEQI-------SKLESAVEILHQGFEPTNDVFSGRDLVEELIY 422
Score = 58 (25.5 bits), Expect = 4.1e-24, Sum P(2) = 4.1e-24
Identities = 18/63 (28%), Positives = 32/63 (50%)
Query: 497 LETHQEETLSKHGAKQL-LRDRIVELLLAAGWKIEYRPRNGREYCDAVYVNPEGKTHWSI 555
L T + ++++G ++ L ++ L A GW I Y N R + Y +P+GK +S+
Sbjct: 22 LSTVKHGKMTENGKRRSDLSIKVKRHLSALGWVISYY--NKRNKKEQRYKSPKGKWFYSL 79
Query: 556 TLA 558
A
Sbjct: 80 AKA 82
Score = 40 (19.1 bits), Expect = 5.7e-09, Sum P(3) = 5.7e-09
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 1324 ANVIIDQDHQQLPVVGCISVSGERKLETDKVKSDSVFSQISSV 1366
A V +D+D ++P+V ++S R+ +V D + Q+S +
Sbjct: 448 AAVRVDKDVVEIPLVA--TLSSYRRSGMCRVLMDELEKQMSQM 488
Score = 39 (18.8 bits), Expect = 4.5e-07, Sum P(3) = 4.5e-07
Identities = 20/77 (25%), Positives = 33/77 (42%)
Query: 323 EGEQTKI-----SKVKPGRPPKLNKIDESCEQRRKKVKDKRGRPR-----HKTHESGESD 372
EG T + K++ G ++ I E ++RRK ++ RP+ K + E
Sbjct: 175 EGSDTAVFNGDQEKIRIGL--NVDVIHEQQKKRRKMASEEIRRPKMVKSLKKVLQVMEKK 232
Query: 373 GEQRKRLKNKLGRPRKD 389
++ K K L RKD
Sbjct: 233 QQKNKHEKESLRFCRKD 249
>TAIR|locus:504955937 [details] [associations]
symbol:AT2G22795 "AT2G22795" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005802
"trans-Golgi network" evidence=IDA] GO:GO:0005794 EMBL:CP002685
GO:GO:0005768 GO:GO:0005802 IPI:IPI00534353 RefSeq:NP_850032.1
UniGene:At.45724 UniGene:At.74141 PRIDE:F4IKG5
EnsemblPlants:AT2G22795.1 GeneID:816810 KEGG:ath:AT2G22795
OMA:ESTCRKT Uniprot:F4IKG5
Length = 734
Score = 133 (51.9 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 77/397 (19%), Positives = 156/397 (39%)
Query: 4 GLRSGDISVKAEVKLMSERENEVNDEKKNLFDLNDETTEKEDSGSTSPKETMEIKEIDEK 63
G + S E ++ ++N +E + E E++D+G T E +E + +
Sbjct: 151 GTEENEKSGTEESEVEERKDNGGTEENEKSGTEESEVEERKDNGGTEENEKSGTEESEVE 210
Query: 64 ASDECGETGLGENDRNSSRVDCVVKEDSKVKNAGTVFW---SGLGIKSGNDKESN----K 116
E G G EN+++ S + V+E K N GT SG +K+ N +
Sbjct: 211 ERKENG--GTEENEKSGSE-ESEVEE--KKDNGGTEESREKSGTEESEVEEKKDNGSSEE 265
Query: 117 IEIEEKDRNTGCDGSENERGFDV----HVEGLRSGSISVKPEDKFILGPESEVIDKKRIL 172
E+EEK N G D SE + D+ ++E R + ++ E +
Sbjct: 266 SEVEEKKENRGIDESEESKEKDIDEKANIEEARENNYKGDDASSEVVHESEEKTSESENS 325
Query: 173 FDLNDEIIPFMDFGPDSVKENI--KTKENDAPINDE--CGEI-GLDGNKRKRSRVYGEEL 227
+ D+ + DSV +++ T +N +DE G G + + + + GE +
Sbjct: 326 EKVEDKSGIKTEEVEDSVIKSVLPNTTDNGESSSDEKSTGSSSGHESDSLEGIKSEGESM 385
Query: 228 GEDVVVKKRLKEDITAKNV-GRVLRSRLGIKRGSEKESNQAEIEERGSNRVF--DGSENE 284
++ +++K + +V G+ S G + + + S+Q E + + S + S E
Sbjct: 386 EKNELLEKEFNDSNGESSVTGKSTGSGDGGSQETSEVSSQEESKGKESETKDKEESSSQE 445
Query: 285 RDVDMQMEVSNETNGAXXXXXXXXXXXXXXXMLENDESEGEQTKISKVKPGRPPKLN-KI 343
D + E + + + + + + E + K++ + K
Sbjct: 446 ESKDRETETKEKEESSSQEETMDKETEAKEKVESSSQEKNEDKETEKIESSFLEETKEKE 505
Query: 344 DESCEQRRKKVKDKRGRPRHKTHESGESDGEQRKRLK 380
DE+ E+ ++K +T ++ ES ++ + K
Sbjct: 506 DETKEKEESSSQEKTEEKETETKDNEESSSQEETKDK 542
Score = 132 (51.5 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 77/377 (20%), Positives = 149/377 (39%)
Query: 23 ENEVNDEKKNLFDLNDETTEKEDSGSTSPKETMEIKEIDEKAS-DECGETGLGENDRNSS 81
E+EV ++K N E EK+++ E + K+IDEKA+ +E E +D +S
Sbjct: 251 ESEVEEKKDNGSSEESEVEEKKENRGIDESEESKEKDIDEKANIEEARENNYKGDDASSE 310
Query: 82 RVDCVVKEDSKVKNAGTVFWSGLGIKSGNDKES-------NKIEIEEKDRNTGCDGSENE 134
V ++ S+ +N+ V GIK+ ++S N + E + GS +
Sbjct: 311 VVHESEEKTSESENSEKVEDKS-GIKTEEVEDSVIKSVLPNTTDNGESSSDEKSTGSSSG 369
Query: 135 RGFDVHVEGLRSGSISVKP----EDKFI-LGPESEVIDKKRILFDLNDEIIPFMDFGPDS 189
D +EG++S S++ E +F ES V K D + + +S
Sbjct: 370 HESD-SLEGIKSEGESMEKNELLEKEFNDSNGESSVTGKSTGSGDGGSQETSEVSSQEES 428
Query: 190 VKENIKTKEND-APINDECGEIGLDGNKRKRSRVYGEELGEDVVVKKRLKEDITAKNVGR 248
+ +TK+ + + +E + + +++ S E + ++ K++++ KN +
Sbjct: 429 KGKESETKDKEESSSQEESKDRETETKEKEESSSQEETMDKETEAKEKVESSSQEKNEDK 488
Query: 249 V---LRSRLGIKRGSEKESNQAEIEERGSNRVFDGSENERDVDMQMEVSNETNGAXXXXX 305
+ S ++ EKE E EE S + E E + + ET
Sbjct: 489 ETEKIESSF-LEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEETKDKENEKI 547
Query: 306 XXXXXXXXXXMLENDESEGEQTKISKVKPGRPPKLNKIDESCEQRRKKVKDKRGRPRHKT 365
EN+ E+ + S + + + KI++ +++ K+K K
Sbjct: 548 EKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAPQEETKEKENEKIEK- 606
Query: 366 HESGESDGEQRKRLKNK 382
ES + + K + K
Sbjct: 607 EESASQEETKEKETETK 623
Score = 116 (45.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 113/518 (21%), Positives = 185/518 (35%)
Query: 17 KLMSERENEVN-DEKKN-LFDLNDETTEKEDSGSTSPKET-MEIKE------IDEKASDE 67
K + E N N D+K+N + + +E EKE G S +++ EI+E ++E +E
Sbjct: 85 KNVVESFNSGNGDDKENEIVEGGEENKEKESEGIVSNEDSNSEIEEKKDSGGVEESEVEE 144
Query: 68 CGETGLGENDRNSSRVDCVVKEDSKVKNAGTVFWSGLGIKSGNDKESNKIEIEEKDRNTG 127
+ G G + S + E+ K N GT G + +E E++ +G
Sbjct: 145 KRDNGGGTEENEKSGTEESEVEERK-DNGGTEENEKSGTEESEVEERKDNGGTEENEKSG 203
Query: 128 CDGSE-NERGFDVHVE-GLRSGSISVKPEDKFILGPESEVIDKKRILFDLNDEIIPFMDF 185
+ SE ER + E +SGS + E+K G E +K E+ D
Sbjct: 204 TEESEVEERKENGGTEENEKSGSEESEVEEKKDNGGTEESREKSGTE---ESEVEEKKDN 260
Query: 186 GPDSVKENIKTKENDA-PINDECGEIGLD--GN-KRKRSRVY-GEELGEDVVVKKRLKED 240
G E + KEN ++E E +D N + R Y G++ +VV + K
Sbjct: 261 GSSEESEVEEKKENRGIDESEESKEKDIDEKANIEEARENNYKGDDASSEVVHESEEKTS 320
Query: 241 ITAKNVGRVLRSRLGIKRGSEKESNQAEIEERGSNRVFDGSENERDVDMQMEVSNETNGA 300
++N +V + GIK +E + I+ N D E+ D S + +
Sbjct: 321 -ESENSEKV-EDKSGIKT---EEVEDSVIKSVLPNTT-DNGESSSDEKSTGSSSGHESDS 374
Query: 301 XXXXXXXXXXXXXXXMLEND--ESEGEQTKISKVKPGRPPKLNKIDESCEQRRKKVKDKR 358
+LE + +S GE + K + E Q K K+
Sbjct: 375 LEGIKSEGESMEKNELLEKEFNDSNGESSVTGKSTGSGDGGSQETSEVSSQEESKGKESE 434
Query: 359 GRPRHKTHESGESDGEQRKRLKNKLGRPRKDGXXXXXXXXXXXXXXXXXXXQGINEXXXX 418
+ + ++ ES ++ K K Q NE
Sbjct: 435 TKDKEESSSQEESK-DRETETKEK---EESSSQEETMDKETEAKEKVESSSQEKNEDKET 490
Query: 419 XXXXXXXXNGIRKSQRHTLAVGLKRDVPTYGLIPEKR---HGGTEFNAQRFAPDKKNSCA 475
++ + T K + + EK E ++Q DK+N
Sbjct: 491 EKIESSFLEETKEKEDETKE---KEESSSQEKTEEKETETKDNEESSSQEETKDKENEKI 547
Query: 476 ETGEAISRQTMKTVNQREKKCLE--THQEETLSKHGAK 511
E EA S++ K N+ E K E + QEET K K
Sbjct: 548 EKEEASSQEESKE-NETETKEKEESSSQEETKEKENEK 584
Score = 115 (45.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 81/387 (20%), Positives = 155/387 (40%)
Query: 13 KAEVKLMSERENEVNDEKKNLFDLND-ETTEKEDSGSTSPKETMEIKEIDEKASDECGET 71
++E + +E N +EKK+ + + E EK D+G + E E +E +E +
Sbjct: 114 ESEGIVSNEDSNSEIEEKKDSGGVEESEVEEKRDNGGGT--EENEKSGTEESEVEERKDN 171
Query: 72 GLGENDRNSSRVDCVVKEDSKVKNAGTVFWSGLGIKSGNDKESNKIEIEEKDRNTGCDGS 131
G E + S + V+E + N GT G + +E + E++ +G + S
Sbjct: 172 GGTEENEKSGTEESEVEE--RKDNGGTEENEKSGTEESEVEERKENGGTEENEKSGSEES 229
Query: 132 ENERGFD---VHVEGLRSGSISVKPEDKFILGP--ESEVIDKKRIL-FDLNDEIIPFMDF 185
E E D +SG+ + E+K G ESEV +KK D ++E D
Sbjct: 230 EVEEKKDNGGTEESREKSGTEESEVEEKKDNGSSEESEVEEKKENRGIDESEESKE-KDI 288
Query: 186 GPDSVKENIK-TKENDAPINDECGEIGLDGNKRKRSRVYGEELGEDVVVKKRLKEDITAK 244
D K NI+ +EN+ +D E+ + ++ E++ + +K ED K
Sbjct: 289 --DE-KANIEEARENNYKGDDASSEVVHESEEKTSESENSEKVEDKSGIKTEEVEDSVIK 345
Query: 245 NVGRVLRSRLGIKRGSEKESNQAEIEERGSNRVF--DGSENERDVDMQMEVSNETNGAXX 302
+V G EK + + E S +G E++ ++ E N++NG
Sbjct: 346 SVLPNTTDN-GESSSDEKSTGSSSGHESDSLEGIKSEGESMEKNELLEKEF-NDSNGESS 403
Query: 303 XXXXXXXXXXXXXMLENDESEGEQTKISKVKPGRPPKLNKIDESCEQRRKKVKDKRGRPR 362
++ S E++K K + + + E + R + K+K
Sbjct: 404 VTGKSTGSGDGGSQETSEVSSQEESK-GKESETKDKEESSSQEESKDRETETKEKEESSS 462
Query: 363 HKTHESGESDGEQRKRLKNKLGRPRKD 389
+ E+ + + E ++++++ +D
Sbjct: 463 QE--ETMDKETEAKEKVESSSQEKNED 487
Score = 66 (28.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 30/115 (26%), Positives = 47/115 (40%)
Query: 1175 DKSAPGESTLQFPNGSTHDASGLTSETVNFPESTTDTNCIDQLGVTSNDLQANDKIAVNT 1234
++SAP E T + N + E E T+T ++ +SN+ Q N VNT
Sbjct: 588 EESAPQEETKEKENEKIEKEESASQEETK--EKETETK--EKEESSSNESQEN----VNT 639
Query: 1235 LGSPSDADEQTED-TDDPNASSLAVKSIAS--EVQIEYGSAKQSLNSCDEASAQQ 1286
+ E+ E TD+ + S S++ + Q E S K+ N E Q
Sbjct: 640 ESEKKEQVEENEKKTDEDTSESSKENSVSDTEQKQSEETSEKEESNKNGETEVTQ 694
Score = 50 (22.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 33/179 (18%), Positives = 72/179 (40%)
Query: 1239 SDADEQTEDTDDPNASSLAVKSIASEVQIEYGSA-KQSLNSCDEASAQQSAEIIKHQSLG 1297
S + E+T+D ++ S + E + K+ +S +E +++ +I K +S
Sbjct: 533 SSSQEETKDKENEKIEKEEASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAP 592
Query: 1298 FLSELNVSSENVVAHDSVSID-CRPLDANVIIDQDHQQLPVVGCISVSGERK--LETDKV 1354
+E + +S S + + + ++ ++ E+K +E ++
Sbjct: 593 QEETKEKENEKIEKEESASQEETKEKETETKEKEESSSNESQENVNTESEKKEQVEENEK 652
Query: 1355 KSDSVFSQIS---SVVAGDMKQALTESIKANHILR-ETIITSSCNADQASPSAPQRAQN 1409
K+D S+ S SV + KQ+ S K ET +T + + + PQ ++
Sbjct: 653 KTDEDTSESSKENSVSDTEQKQSEETSEKEESNKNGETEVTQEQSDSSSDTNLPQEVKD 711
Score = 46 (21.3 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 9/49 (18%), Positives = 28/49 (57%)
Query: 469 DKKNSCAETGEAISRQTMKTVNQREKKCLETHQEETLSKHGAKQLLRDR 517
++K + +T E+ ++ Q++ + ET ++E +K+G ++ +++
Sbjct: 650 NEKKTDEDTSESSKENSVSDTEQKQSE--ETSEKEESNKNGETEVTQEQ 696
Score = 45 (20.9 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 460 EFNAQRFAPDKKNSCAETGEAISRQ-TMKTVNQREKKCLETHQEETLSKHGAK 511
E ++Q + + + E E+ S++ T + N++ +K QEET K K
Sbjct: 551 EASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAPQEETKEKENEK 603
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 149 (57.5 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 83/376 (22%), Positives = 146/376 (38%)
Query: 23 ENEVNDEKKNLFDLNDETTEKEDSGSTSPKETMEIKEIDEKASDECGETGLGEND--RNS 80
++EVND DE EKE+ S S + E +E +EK D + E + ++
Sbjct: 1028 DSEVNDTMTK-HSSEDEEKEKEEKSSDSSNASSEDEEEEEKNGDSAKASSEDEEEEEKSG 1086
Query: 81 SRVDCVVKEDSKVKNAGTVFWSGLGIKSGNDKESNKI---EIEEKDRNTGCDG--SENER 135
S V +++ + + G F + +SG+ ++ + E E+K ++ D SE E
Sbjct: 1087 SSVKASSEDEEEEEENGDSFKASSKEESGDSANASNVNSEEEEQKSKSEATDDLESEEEE 1146
Query: 136 GFDVHVEGLRSGSISVKPE-----DKFIL------GPESEVIDK---KRILFDLNDEIIP 181
+ + E S S + E DK G ESE + +R D DE
Sbjct: 1147 DNEDNEEEKSETSASTEDESNDDEDKSETSQEEESGEESEGNSESRSERSEEDDEDEESE 1206
Query: 182 FMDFGPDSVKENIKTKENDAPINDECGEIGLDGNKRKRSRVYGEELGEDVVVKKRLKEDI 241
+ +S E +T EN + +DE E + ++ S GEE + + E+
Sbjct: 1207 KEESEVESEAEEDETGENTSEEDDEEQESSSEDEEKSESEAEGEEEESEGDQEDESDEET 1266
Query: 242 TAKNVGRVLRSRLGIKRGSEKESNQAEIEERGSNRVFDGSENERDVDMQMEVSNETNGAX 301
+ K+ E+E ++ E EE SN + E E + + E + E
Sbjct: 1267 SDKDE----EEEESENEEEEEEESKVEEEEEESNEEEENEEEEAEEEEPGEDTEEAEDEE 1322
Query: 302 XXXXXXXXXXXXXXMLENDESEGEQTKISKVKPGRPPKLNKIDESCEQRRKKVKDKRGRP 361
E +E E E+ K K K R +++ + + + VK + +
Sbjct: 1323 GEEEDTQEEEQENGDDEEEEEEEEEEK-EKTKTKREKASSRLQKDAAKPKPSVKTHKPKA 1381
Query: 362 RHKTHESGESDGEQRK 377
+ +S +SD E +
Sbjct: 1382 KQARAQSDQSDDESHE 1397
Score = 142 (55.0 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 86/404 (21%), Positives = 152/404 (37%)
Query: 3 EGLRSGDISVK-AEVKLMSERENEVNDEKKNLFDLNDETTEKEDSGSTSPKETM------ 55
EG D +K + + SE E VND N+E E+E S + +TM
Sbjct: 982 EGDEDDDTMIKDSSEEEESEEEKTVNDTVTKASSENEEREEEEKSNDSEVNDTMTKHSSE 1041
Query: 56 -EIKEIDEKASDECGETGLGENDRNSSRVDCVVKEDSKVKNAGTVFWSGLGIKSGNDKES 114
E KE +EK+SD + E + + + + + SG +K+ ++ E
Sbjct: 1042 DEEKEKEEKSSDSSNASSEDEEEEEKNGDSAKASSEDEEEEEK----SGSSVKASSEDE- 1096
Query: 115 NKIEIEEKDRNTGCDGSENERGFDVHVEGLRSGSISVKPEDKFILGPESEVIDKKRILFD 174
E EE++ ++ S+ E G + + S K + + ESE + D
Sbjct: 1097 ---EEEEENGDSFKASSKEESGDSANASNVNSEEEEQKSKSEATDDLESEEEEDNE---D 1150
Query: 175 LNDEIIPFMDFGPDSVKENIKTKENDAPINDECGEIGLDGNKRKRSRVYGEELGEDVV-- 232
+E D + N +++ +E GE +GN RS EE ED
Sbjct: 1151 NEEEKSETSASTED--ESNDDEDKSETSQEEESGEES-EGNSESRSE-RSEEDDEDEESE 1206
Query: 233 -----VKKRLKEDITAKNVGRVLRSRLGIKRGSEKESNQAEIEERGSNRVFDGS-ENERD 286
V+ +ED T +N + S ++ ++E E G +G E+E D
Sbjct: 1207 KEESEVESEAEEDETGENTSEEDDEE---QESSSEDEEKSESEAEGEEEESEGDQEDESD 1263
Query: 287 VDMQMEVSNETNGAXXXXXXXXXXXXXXXMLENDESEGEQTKISKVKPGRPPKLNKIDES 346
+ + E N+E E E+ + + +PG + + +E
Sbjct: 1264 EETSDKDEEEEESENEEEEEEESKVEEEEEESNEEEENEEEEAEEEEPGEDTEEAEDEEG 1323
Query: 347 CEQRRKKVKDKRGRPRHKTHESGESDGEQRKRLKNKLG-RPRKD 389
E+ ++ + + G + E E + E+ K + K R +KD
Sbjct: 1324 EEEDTQEEEQENGDDEEEEEEE-EEEKEKTKTKREKASSRLQKD 1366
Score = 42 (19.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 10/48 (20%), Positives = 21/48 (43%)
Query: 6 RSGDISVKAEVKLMSERENEVNDEKKNLFDLNDETTEKEDSGSTSPKE 53
R+G S+K + + E ++V + N E + G++ P +
Sbjct: 611 RAGSKSLKLKHTELMESSDKVKKQSTEKTQQNQEVEVQRSKGTSKPTQ 658
>UNIPROTKB|Q5JSK9 [details] [associations]
symbol:HMGN5 "High mobility group nucleosome-binding
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0000785 "chromatin" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000079
Pfam:PF01101 SMART:SM00527 GO:GO:0005730 GO:GO:0000785
GO:GO:0031492 EMBL:AL391294 UniGene:Hs.282204 HGNC:HGNC:8013
HOGENOM:HOG000113856 ChiTaRS:HMGN5 EMBL:AL357115 EMBL:AL590810
IPI:IPI00642320 STRING:Q5JSK9 Ensembl:ENST00000447319
Uniprot:Q5JSK9
Length = 201
Score = 120 (47.3 bits), Expect = 0.00021, P = 0.00021
Identities = 47/143 (32%), Positives = 69/143 (48%)
Query: 3 EGLRSGDISVKAEVKLMSEREN-EVNDEKKNLFDLNDETTEKEDSGSTSPK-ETMEIKEI 60
E ++G+ + E SE+E EV +E N+ D ++ EK+++ + K E + KE
Sbjct: 58 ENAKNGEAKI-TEAPA-SEKEIVEVKEE--NIEDATEKGGEKKEAVAAEVKNEEEDQKED 113
Query: 61 DEKASDECGETGL------GENDRNSSRVDCVVKEDSKVKNAGTVFWSGLGIKSGND-KE 113
+E ++E GE G GE D + ED+K K G G G +G D KE
Sbjct: 114 EEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGKG--NGEDGKE 171
Query: 114 SNKIEIEEKDRNTGCDGSENERG 136
+ E EE+DR DG ENE G
Sbjct: 172 KGEDEKEEEDRKETGDGKENEDG 194
>TAIR|locus:2098443 [details] [associations]
symbol:AT3G28770 "AT3G28770" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0009827 "plant-type cell wall modification"
evidence=RCA] [GO:0009860 "pollen tube growth" evidence=RCA]
EMBL:CP002686 GenomeReviews:BA000014_GR HSSP:P01096 eggNOG:NOG12793
EMBL:AP002057 InterPro:IPR009605 Pfam:PF06746 IPI:IPI00529324
RefSeq:NP_189519.1 UniGene:At.42736 ProteinModelPortal:Q9LH98
PaxDb:Q9LH98 PRIDE:Q9LH98 EnsemblPlants:AT3G28770.1 GeneID:822509
KEGG:ath:AT3G28770 TAIR:At3g28770 OMA:SKNEILM
ProtClustDB:CLSN2912834 Genevestigator:Q9LH98 Uniprot:Q9LH98
Length = 2081
Score = 138 (53.6 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 84/404 (20%), Positives = 167/404 (41%)
Query: 4 GLRSGDISVKAEVKLMSERENEVNDEKKNLFDLNDETTEKEDSGSTSPKETMEIKEIDEK 63
G D SV+A+ K +EN+ +N KE++ + KE+ ++++ ++K
Sbjct: 738 GESKDDKSVEAKGKKKESKENKKTKTNEN------RVRNKEENVQGNKKESEKVEKGEKK 791
Query: 64 ASDECGETGLGENDRNSSRVDCVVKEDSKVKNAGTVFWSGLGIKSGNDKESNK----IEI 119
S + +N + SS + ++++K ++ G + DKE +K +E
Sbjct: 792 ESKDAKSVETKDNKKLSSTEN---RDEAKERS---------GEDNKEDKEESKDYQSVEA 839
Query: 120 EEKDRNTGCD----GSENERGF----DVHVEGLRSGSISVKPED--KFILGPESEVID-K 168
+EK+ N G D E+ + V V+ + S+ K E+ + EV D
Sbjct: 840 KEKNENGGVDTNVGNKEDSKDLKDDRSVEVKANKEESMKKKREEVQRNDKSSTKEVRDFA 899
Query: 169 KRILFDLNDEIIPFMDFGPDSVKENIKTKENDAPINDECGEIGLDGNKRKRSRVYGEELG 228
+ D+ + + D KE K +EN IN + G D K+K+
Sbjct: 900 NNMDIDVQKGSGESVKYKKDEKKEGNK-EENKDTINTSSKQKGKDKKKKKKE-------S 951
Query: 229 EDVVVKKRLKEDITAKNVGRVLRSRLGIKRGSEKESNQAEIEERGSNRVFDGSENERDVD 288
++ +KK KE+ + V L+ + K+ + K N EE N+ SE+ +
Sbjct: 952 KNSNMKK--KEEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKN 1009
Query: 289 MQMEVSNETNGAXXXXXXXXXXXXXXXMLENDESEGEQTKISKVKPGRPPKLNKIDESCE 348
+ + E E +SE ++K K + R K K +E +
Sbjct: 1010 REKKEYEEKKSKTKEEAKKEKKKSQDKKREEKDSEERKSKKEK-EESRDLKAKKKEEETK 1068
Query: 349 QRRK----KVKDKRGRPRHKTHESGESDGEQRKRLKNKLGRPRK 388
++++ K K K + H+ ++S + + +++++ K++ + RK
Sbjct: 1069 EKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKHEESKSRK 1112
Score = 54 (24.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 20/81 (24%), Positives = 34/81 (41%)
Query: 1341 ISVSGERKLETDKVKSDSVFSQISSVVAGDMKQALTESIKANHILRETIITSSCNADQAS 1400
I S +K E DK + S Q +MK++ + +K N R+ + N Q
Sbjct: 1168 IESSKSQKNEVDKKEKKSSKDQ-QKKKEKEMKESEEKKLKKNEEDRKKQTSVEENKKQKE 1226
Query: 1401 PSAPQRAQNDDCINSSRQANG 1421
+ DD N+++Q+ G
Sbjct: 1227 TKKEKNKPKDDKKNTTKQSGG 1247
>UNIPROTKB|P82970 [details] [associations]
symbol:HMGN5 "High mobility group nucleosome-binding
domain-containing protein 5" species:9606 "Homo sapiens"
[GO:0000785 "chromatin" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=NAS]
[GO:0003682 "chromatin binding" evidence=NAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] InterPro:IPR000079
Pfam:PF01101 PRINTS:PR00925 PROSITE:PS00355 SMART:SM00527
GO:GO:0045893 GO:GO:0005654 GO:GO:0005730 GO:GO:0000785
GO:GO:0006357 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
EMBL:CH471104 GO:GO:0031492 OrthoDB:EOG4CZBHP EMBL:AF250329
EMBL:AF250330 EMBL:AK094058 EMBL:AL391294 EMBL:BC005342
IPI:IPI00006157 RefSeq:NP_110390.1 UniGene:Hs.282204
ProteinModelPortal:P82970 IntAct:P82970 STRING:P82970
PhosphoSite:P82970 DMDM:23396771 PaxDb:P82970 PRIDE:P82970
DNASU:79366 Ensembl:ENST00000358130 GeneID:79366 KEGG:hsa:79366
UCSC:uc004eee.1 CTD:79366 GeneCards:GC0XM080370 HGNC:HGNC:8013
HPA:HPA000511 MIM:300385 neXtProt:NX_P82970 PharmGKB:PA31789
eggNOG:NOG134182 HOGENOM:HOG000113856 HOVERGEN:HBG094823
InParanoid:P82970 OMA:KDDGGKD ChiTaRS:HMGN5 GenomeRNAi:79366
NextBio:68337 ArrayExpress:P82970 Bgee:P82970 CleanEx:HS_NSBP1
Genevestigator:P82970 GermOnline:ENSG00000198157 Uniprot:P82970
Length = 282
Score = 122 (48.0 bits), Expect = 0.00040, P = 0.00040
Identities = 50/163 (30%), Positives = 77/163 (47%)
Query: 3 EGLRSGDISVKAEVKLMSEREN-EVNDEKKNLFDLNDETTEKEDSGSTSPK-ETMEIKEI 60
E ++G+ + E SE+E EV +E N+ D ++ EK+++ + K E + KE
Sbjct: 78 ENAKNGEAKI-TEAPA-SEKEIVEVKEE--NIEDATEKGGEKKEAVAAEVKNEEEDQKED 133
Query: 61 DEKASDECGETGL------GENDRNSSRVDCVVKEDSKVKNAGTVFWSGLGIKSGND-KE 113
+E ++E GE G GE D + ED+K K G G G +G D KE
Sbjct: 134 EEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGKG--NGEDGKE 191
Query: 114 SNKIEIEEKDRNTGCDGSENERGFDVHVEGLRSGSISVKPEDK 156
+ E EE+DR DG ENE G + + + VK ++K
Sbjct: 192 KGEDEKEEEDRKETGDGKENEDGKEKG-DKKEGKDVKVKEDEK 233
>TAIR|locus:2137544 [details] [associations]
symbol:AT4G37820 "AT4G37820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005794
"Golgi apparatus" evidence=ISM;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0005768 "endosome"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
GO:GO:0005794 EMBL:CP002687 EMBL:AL035709 EMBL:AL161592
GO:GO:0005768 GO:GO:0005802 UniGene:At.2877 EMBL:AK117758
IPI:IPI00537218 PIR:T06029 RefSeq:NP_195495.1 UniGene:At.31227
PRIDE:Q9T069 EnsemblPlants:AT4G37820.1 GeneID:829938
KEGG:ath:AT4G37820 TAIR:At4g37820 HOGENOM:HOG000210060
InParanoid:Q9T069 OMA:EPQATEE ArrayExpress:Q9T069
Genevestigator:Q9T069 Uniprot:Q9T069
Length = 532
Score = 124 (48.7 bits), Expect = 0.00076, P = 0.00076
Identities = 87/370 (23%), Positives = 153/370 (41%)
Query: 23 ENE-VNDEKKNLFDL-NDETTEKEDSGSTSPKETMEIKEIDEKASDECGETGLGENDRNS 80
E+E V DE + ++ N+E E G + E M E EK++++ E GE+ NS
Sbjct: 141 ESEKVVDESEGGNEISNEEAREINYKGDDASSEVMHGTE--EKSNEKV-EVE-GESKSNS 196
Query: 81 SRVDCVVKEDSKVKNAGTVFWSGLGIK--SGNDKESNKIEIEEKDRNTGCDGSENERGF- 137
+ V +++S KN V G IK S N E+ + E+++ + D E+GF
Sbjct: 197 TENVSVHEDESGPKNE--VL-EGSVIKEVSLNTTENGSDDGEQQETKSELDSKTGEKGFS 253
Query: 138 DVHVEGLRSG-SISVKPEDKFILGPESEVIDKKRILFDLN----DEIIPFMDFGPDS-VK 191
D + E + S S E G + K + DE +S VK
Sbjct: 254 DSNGELPETNLSTSNATETTESSGSDESGSSGKSTGYQQTKNEEDEKEKVQSSEEESKVK 313
Query: 192 ENIKTKENDAPINDECGEIGLDGNKRKRSRVYGEELGEDVVVKKRLKEDITAKNVGRVLR 251
E+ K +++ + DE E + K++ S GE G++ +KR KED +++ +
Sbjct: 314 ESGKNEKDASSSQDESKEEKPERKKKEESSSQGE--GKEEEPEKREKEDSSSQEESKEEE 371
Query: 252 SRLGIKRGS----EKESNQAEIEERGSNRVFDGSENERDVDMQMEVSNETNGAXXXXXXX 307
K S E E + EI+E+ + +G+EN+ E + N
Sbjct: 372 PENKEKEASSSQEENEIKETEIKEKEESSSQEGNENKETEKKSSESQRKENTNSEKKIEQ 431
Query: 308 XXXXXXXXMLENDESEGEQTKISKVKPGRPPKLNKIDESCEQRRKKVKDKRGRPRHKTHE 367
+ DE ++T SK + G + ++ + + K++ R +T E
Sbjct: 432 VESTDSSNTQKGDE---QKTDESKRESGNDTSNKETEDDSSKTESEKKEENNR-NGETEE 487
Query: 368 SGESDGEQRK 377
+ +++ EQ K
Sbjct: 488 T-QNEQEQTK 496
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.131 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 1562 1474 0.00096 124 3 11 23 0.47 34
39 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 628 (67 KB)
Total size of DFA: 646 KB (2283 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 152.85u 0.09s 152.94t Elapsed: 00:00:11
Total cpu time: 152.85u 0.09s 152.94t Elapsed: 00:00:11
Start: Sat May 11 08:54:05 2013 End: Sat May 11 08:54:16 2013