BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000404
(1562 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q99PP7|TRI33_MOUSE E3 ubiquitin-protein ligase TRIM33 OS=Mus musculus GN=Trim33 PE=1
SV=2
Length = 1142
Score = 67.4 bits (163), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 803 NFDGEDPNDDTCGICGDGGDLICCDGCPSTFHQNC--LDIKKFPSGKWHCVYC 853
N +DPN+D C +C +GGDL+CC+ CP FH C + FPSG W C +C
Sbjct: 894 NSKDDDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC 946
>sp|Q9UPN9|TRI33_HUMAN E3 ubiquitin-protein ligase TRIM33 OS=Homo sapiens GN=TRIM33 PE=1
SV=3
Length = 1127
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 807 EDPNDDTCGICGDGGDLICCDGCPSTFHQNC--LDIKKFPSGKWHCVYC 853
+DPN+D C +C +GGDL+CC+ CP FH C + FPSG W C +C
Sbjct: 883 DDPNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFC 931
>sp|O15164|TIF1A_HUMAN Transcription intermediary factor 1-alpha OS=Homo sapiens GN=TRIM24
PE=1 SV=3
Length = 1050
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 792 DESKRKGFHFVNFDGED-PNDDTCGICGDGGDLICCDGCPSTFHQNC--LDIKKFPSGKW 848
D S++ H ED PN+D C +C +GG+L+CC+ CP FH +C + FPSG+W
Sbjct: 806 DPSQKSPLHVGETRKEDDPNEDWCAVCQNGGELLCCEKCPKVFHLSCHVPTLTNFPSGEW 865
Query: 849 HCVYC 853
C +C
Sbjct: 866 ICTFC 870
>sp|Q9Z0E3|AIRE_MOUSE Autoimmune regulator OS=Mus musculus GN=Aire PE=1 SV=1
Length = 552
Score = 67.0 bits (162), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 36/56 (64%), Gaps = 5/56 (8%)
Query: 810 NDDTCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYCSCQFCGRINE 863
N+D C +C DGG+LICCDGCP FH CL +++ PSG W CSC GR+ +
Sbjct: 297 NEDECAVCHDGGELICCDGCPRAFHLACLSPPLQEIPSGLWR---CSCCLQGRVQQ 349
>sp|Q64127|TIF1A_MOUSE Transcription intermediary factor 1-alpha OS=Mus musculus GN=Trim24
PE=1 SV=1
Length = 1051
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 807 EDPNDDTCGICGDGGDLICCDGCPSTFHQNC--LDIKKFPSGKWHCVYC 853
+DPN+D C +C +GG+L+CC+ CP FH C + FPSG+W C +C
Sbjct: 823 DDPNEDWCAVCQNGGELLCCEKCPKVFHLTCHVPTLTNFPSGEWICTFC 871
>sp|Q6E2N3|TRI33_DANRE E3 ubiquitin-protein ligase TRIM33 OS=Danio rerio GN=trim33 PE=2
SV=1
Length = 1163
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 807 EDPNDDTCGICGDGGDLICCDGCPSTFHQNC--LDIKKFPSGKWHCVYC 853
+DPN+D C +C +GG+L+CCD CP FH C +K PSG W C +C
Sbjct: 917 DDPNEDWCAVCQNGGELLCCDHCPKVFHITCHIPTLKSSPSGDWMCTFC 965
>sp|O43918|AIRE_HUMAN Autoimmune regulator OS=Homo sapiens GN=AIRE PE=1 SV=1
Length = 545
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 810 NDDTCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYC 853
N+D C +C DGG+LICCDGCP FH CL +++ PSG W C C
Sbjct: 295 NEDECAVCRDGGELICCDGCPRAFHLACLSPPLREIPSGTWRCSSC 340
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 4/33 (12%)
Query: 814 CGICGDGGDLICCDGCPSTFHQNCLDIKKFPSG 846
CG+CGDG D++ C C + FH C FP+G
Sbjct: 434 CGVCGDGTDVLRCTHCAAAFHWRC----HFPAG 462
>sp|Q56R14|TRI33_XENLA E3 ubiquitin-protein ligase TRIM33 OS=Xenopus laevis GN=trim33 PE=1
SV=1
Length = 1091
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 809 PNDDTCGICGDGGDLICCDGCPSTFHQNC--LDIKKFPSGKWHCVYC 853
PN+D C +C +GGDL+CC+ CP FH C + FPSG+W C +C
Sbjct: 848 PNEDWCAVCQNGGDLLCCEKCPKVFHLTCHVPTLLSFPSGEWICTFC 894
>sp|O88491|NSD1_MOUSE Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Mus musculus GN=Nsd1 PE=1 SV=1
Length = 2588
Score = 64.7 bits (156), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 811 DDTCGICGDGGDLICC--DGCPSTFHQNCLDIKKFPSGKWHCVYCSCQFCGRINESTCHV 868
+D C CGD G L+ C GCP +H +CL++ K P+GKW C + C CG+ S C +
Sbjct: 2016 EDECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKRPAGKWECPWHQCDVCGKEAASFCEM 2075
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 800 HFVNFDG----EDPNDDTCGICGDGGDLICCDGCPSTFHQNCLDIKKFPSGKWHCVYC 853
HF G E N C +C +GG L+CCD CP+ FH+ CL+I P G W+C C
Sbjct: 1590 HFTPRRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDC 1646
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 13/105 (12%)
Query: 811 DDTCGICGDGGDLICCDG-CPSTFHQNCLDIKKFPSGKWHCVYCSCQFCGRINESTCHVN 869
++ C C G+L+ C+ C FH CL + + P GK+ C C TC V
Sbjct: 1441 ENVCQNCEKLGELLLCEAQCCGAFHLECLGLPEMPRGKFICNECHTGI------HTCFVC 1494
Query: 870 DQDDSALSTLQICSLCEEKYHQSCSQTDGAVQYEPSSLSFCGKKC 914
Q + + LC + YH+ C Q +Y P+ G +C
Sbjct: 1495 KQSGEDVKRC-LLPLCGKFYHEECVQ-----KYPPTVTQNKGFRC 1533
>sp|Q96L73|NSD1_HUMAN Histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20
specific OS=Homo sapiens GN=NSD1 PE=1 SV=1
Length = 2696
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 811 DDTCGICGDGGDLICC--DGCPSTFHQNCLDIKKFPSGKWHCVYCSCQFCGRINESTCHV 868
+D C CGD G L+ C GCP +H +CL++ K P+GKW C + C CG+ S C +
Sbjct: 2118 EDECFSCGDAGQLVSCKKPGCPKVYHADCLNLTKRPAGKWECPWHQCDICGKEAASFCEM 2177
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 800 HFVNFDG----EDPNDDTCGICGDGGDLICCDGCPSTFHQNCLDIKKFPSGKWHCVYC 853
HF G E N C +C +GG L+CCD CP+ FH+ CL+I P G W+C C
Sbjct: 1692 HFTPRRGCRNHEHVNVSWCFVCSEGGSLLCCDSCPAAFHRECLNI-DIPEGNWYCNDC 1748
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 13/105 (12%)
Query: 811 DDTCGICGDGGDLICCDG-CPSTFHQNCLDIKKFPSGKWHCVYCSCQFCGRINESTCHVN 869
++ C C G+L+ C+ C FH CL + + P GK+ C C R TC V
Sbjct: 1543 ENVCQNCEKLGELLLCEAQCCGAFHLECLGLTEMPRGKFICNEC------RTGIHTCFVC 1596
Query: 870 DQDDSALSTLQICSLCEEKYHQSCSQTDGAVQYEPSSLSFCGKKC 914
Q + + LC + YH+ C Q +Y P+ + G +C
Sbjct: 1597 KQSGEDVKRC-LLPLCGKFYHEECVQ-----KYPPTVMQNKGFRC 1635
>sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5
PE=2 SV=1
Length = 1954
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 812 DTCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYCSC 855
+ C +C DGG+L+CCD CPS++H +CL+ + + P+G+W C C+C
Sbjct: 417 EFCRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTC 462
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 807 EDPNDDTCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYC 853
E + D C +C GG++I CD CP +H CLD ++K P GKW C +C
Sbjct: 339 ETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHC 387
>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4
PE=1 SV=2
Length = 1912
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 807 EDPNDDTCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYCSC 855
+D + + C +C DGG+L+CCD CPS++H +CL+ + + P+G+W C C+C
Sbjct: 445 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTC 495
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 23/110 (20%)
Query: 807 EDPNDDTCGICGDGGDLICCDGCPSTFHQNCL--DIKKFPSGKWHCVYCS---CQFCGR- 860
E + D C +C GG++I CD CP +H CL D++K P GKW C +C Q+ +
Sbjct: 366 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEKEGIQWEAKE 425
Query: 861 --------INESTCHVNDQDDSALSTLQICS---------LCEEKYHQSC 893
+ E + ++DD + ++C C YH C
Sbjct: 426 DNSEGEEILEEVGGDLEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHC 475
>sp|Q8BVE8|NSD2_MOUSE Histone-lysine N-methyltransferase NSD2 OS=Mus musculus GN=Whsc1 PE=1
SV=2
Length = 1365
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 805 DGEDPNDDTCGICGDGGDLICCD--GCPSTFHQNCLDIKKFPSGKWHCVYCSCQFCGRIN 862
+G+ ++D C CGDGG L+ CD C +H +CL + K P GKW C + C CG+ +
Sbjct: 1233 EGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFGKWECPWHHCDVCGKPS 1292
Query: 863 ESTCHV-------NDQDDSALSTLQ 880
S CH+ QD +A + Q
Sbjct: 1293 TSFCHLCPNSFCKEHQDGTAFRSTQ 1317
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 810 NDDTCGICGDGGDLICCDGCPSTFHQNCLDIKKFPSGKWHCVYC 853
N C +C GG L+CC+ CP+ FH +CL+I + P G W C C
Sbjct: 830 NVSWCFVCSKGGSLLCCEACPAAFHPDCLNI-EMPDGSWFCNDC 872
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 22/89 (24%)
Query: 813 TCGICGDGGDLICCDG-CPSTFHQNCLDIKKFPSGKWHCVYC-----SCQFC--GRINES 864
C +C G L+ C+G C FH CL + + P G++ C C SC C ++
Sbjct: 669 VCQLCEKTGSLLLCEGPCCGAFHLACLGLSRRPEGRFTCTECASGIHSCFVCKESKMEVK 728
Query: 865 TCHVNDQDDSALSTLQICSLCEEKYHQSC 893
C VN C + YH++C
Sbjct: 729 RCVVNQ--------------CGKFYHEAC 743
>sp|O96028|NSD2_HUMAN Histone-lysine N-methyltransferase NSD2 OS=Homo sapiens GN=WHSC1 PE=1
SV=1
Length = 1365
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 9/82 (10%)
Query: 805 DGEDPNDDTCGICGDGGDLICCD--GCPSTFHQNCLDIKKFPSGKWHCVYCSCQFCGRIN 862
+G+ ++D C CGDGG L+ CD C +H +CL + K P GKW C + C CG+ +
Sbjct: 1233 EGKRQSEDECFRCGDGGQLVLCDRKFCTKAYHLSCLGLGKRPFGKWECPWHHCDVCGKPS 1292
Query: 863 ESTCHV-------NDQDDSALS 877
S CH+ QD +A S
Sbjct: 1293 TSFCHLCPNSFCKEHQDGTAFS 1314
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 810 NDDTCGICGDGGDLICCDGCPSTFHQNCLDIKKFPSGKWHCVYC 853
N C +C GG L+CC+ CP+ FH +CL+I + P G W C C
Sbjct: 830 NVSWCFVCSKGGSLLCCESCPAAFHPDCLNI-EMPDGSWFCNDC 872
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 8/82 (9%)
Query: 813 TCGICGDGGDLICCDG-CPSTFHQNCLDIKKFPSGKWHCVYCSCQFCGRINESTCHVNDQ 871
C +C G L+ C+G C FH CL + + P G++ C C+ +C V +
Sbjct: 669 VCQLCEKPGSLLLCEGPCCGAFHLACLGLSRRPEGRFTCSECASGI------HSCFVCKE 722
Query: 872 DDSALSTLQICSLCEEKYHQSC 893
+ + + + C + YH++C
Sbjct: 723 SKTDVKRC-VVTQCGKFYHEAC 743
>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4
PE=1 SV=1
Length = 1915
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 2/51 (3%)
Query: 807 EDPNDDTCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYCSC 855
+D + + C +C DGG+L+CCD CPS++H +CL+ + + P+G+W C C+C
Sbjct: 438 DDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTC 488
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 807 EDPNDDTCGICGDGGDLICCDGCPSTFHQNCL--DIKKFPSGKWHCVYC 853
E + D C +C GG++I CD CP +H CL D++K P GKW C +C
Sbjct: 359 ETDHQDYCEVCQQGGEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHC 407
>sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog
OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2
Length = 1982
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 814 CGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYCSC 855
C +C DGG+L+CCD CPS +H CL+ + P G W C CSC
Sbjct: 440 CRVCKDGGELLCCDSCPSAYHTFCLNPPLDTIPDGDWRCPRCSC 483
>sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila
melanogaster GN=Chd3 PE=2 SV=3
Length = 892
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 810 NDDTCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYC 853
+++ C +C DGGDL+CCD CPS +H+ CL +K P G W C C
Sbjct: 34 DEEYCKVCSDGGDLLCCDSCPSVYHRTCLSPPLKSIPKGDWICPRC 79
>sp|Q6P2L6|NSD3_MOUSE Histone-lysine N-methyltransferase NSD3 OS=Mus musculus GN=Whsc1l1
PE=1 SV=2
Length = 1439
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 802 VNFDGEDPNDDTCGICGDGGDLICCDG--CPSTFHQNCLDIKKFPSGKWHCVYCSCQFCG 859
V + + ++D C CGDGG+L+ CD CP +H CL++ + P GKW C + C CG
Sbjct: 1314 VKAEAKPIHEDYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPHGKWECPWHRCDECG 1373
Query: 860 RINESTC 866
+ S C
Sbjct: 1374 SVAVSFC 1380
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 817 CGDGGDLICCDGCPSTFHQNCLDIKKFPSGKWHCVYC 853
C GG L+CC+ CP++FH CL I P G W+C C
Sbjct: 917 CEKGGRLLCCESCPASFHPECLSI-DMPEGCWNCNDC 952
Score = 41.6 bits (96), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 806 GEDPNDDTCGICGDGGD-LICCDG-CPSTFHQNCLDIKKFPSGKWHCVYCSCQFCGRINE 863
G D C +C GD L+ C+G C FH CL + P G + C C G+
Sbjct: 696 GTSKKDTVCQVCEKAGDCLVACEGECCRHFHVECLGLTAVPEGHFTCEECE---TGQHPC 752
Query: 864 STCHVNDQDDSALSTLQICSLCEEKYHQSC 893
+C V+ +D S S+C + YH++C
Sbjct: 753 FSCKVSGKDVKRCSV----SVCGKFYHEAC 778
>sp|O15016|TRI66_HUMAN Tripartite motif-containing protein 66 OS=Homo sapiens GN=TRIM66 PE=2
SV=4
Length = 1216
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 810 NDDTCGICGDGGDLICCDGCPSTFHQNC--LDIKKFPSGKWHCVYC 853
N+D C +C +GG+L+CCD CP FH +C + FP G+W C C
Sbjct: 969 NEDFCAVCLNGGELLCCDRCPKVFHLSCHVPALLSFPGGEWVCTLC 1014
>sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3 OS=Homo sapiens GN=CHD3
PE=1 SV=3
Length = 2000
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 3/59 (5%)
Query: 808 DPNDDTCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYCSCQFC-GRINE 863
D + + C +C DGG+L+CCD C S++H +CL+ + P+G+W C C+C GR+ +
Sbjct: 453 DDHMEYCRVCKDGGELLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKGRVQK 511
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 810 NDDTCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYC 853
+ D C +C GG++I CD CP +H CLD + + P GKW C +C
Sbjct: 378 HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELDRAPEGKWSCPHC 423
>sp|Q924W6|TRI66_MOUSE Tripartite motif-containing protein 66 OS=Mus musculus GN=Trim66 PE=1
SV=3
Length = 1242
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 810 NDDTCGICGDGGDLICCDGCPSTFHQNC--LDIKKFPSGKWHCVYC 853
N+D C +C +GG+L+CCD CP +H +C + FP G+W C C
Sbjct: 995 NEDFCAVCINGGELLCCDRCPKVYHLSCHVPALLSFPGGEWVCTLC 1040
>sp|Q96QT6|PHF12_HUMAN PHD finger protein 12 OS=Homo sapiens GN=PHF12 PE=1 SV=2
Length = 1004
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 806 GEDPNDDTCGICGDGGDLICCDGCPSTFHQNC----LDIKKFPSGKWHCVYCS 854
G N D+C C +GGDL+CCD CP+ FH C L + P G+W C C+
Sbjct: 51 GRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 813 TCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHC 850
TC LI CD CP FH +CL+ + P G+W C
Sbjct: 276 TCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMC 315
>sp|Q5SPL2|PHF12_MOUSE PHD finger protein 12 OS=Mus musculus GN=Phf12 PE=2 SV=1
Length = 1003
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 806 GEDPNDDTCGICGDGGDLICCDGCPSTFHQNC----LDIKKFPSGKWHCVYCS 854
G N D+C C +GGDL+CCD CP+ FH C L + P G+W C C+
Sbjct: 51 GRATNHDSCDSCKEGGDLLCCDHCPAAFHLQCCNPPLSEEMLPPGEWMCHRCT 103
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 813 TCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHC 850
TC LI CD CP FH +CL+ + P G+W C
Sbjct: 276 TCNRSCRVAPLIQCDYCPLLFHMDCLEPPLTAMPLGRWMC 315
>sp|Q9BZ95|NSD3_HUMAN Histone-lysine N-methyltransferase NSD3 OS=Homo sapiens GN=WHSC1L1
PE=1 SV=1
Length = 1437
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 810 NDDTCGICGDGGDLICCDG--CPSTFHQNCLDIKKFPSGKWHCVYCSCQFCGRINESTC 866
++D C CGDGG+L+ CD CP +H CL++ + P GKW C + C C S C
Sbjct: 1320 HEDYCFQCGDGGELVMCDKKDCPKAYHLLCLNLTQPPYGKWECPWHQCDECSSAAVSFC 1378
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Query: 817 CGDGGDLICCDGCPSTFHQNCLDIKKFPSGKWHCVYC 853
C GG L+CC+ CP++FH CL I + P G W+C C
Sbjct: 917 CEKGGRLLCCESCPASFHPECLSI-EMPEGCWNCNDC 952
Score = 41.2 bits (95), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 44/92 (47%), Gaps = 13/92 (14%)
Query: 806 GEDPNDDTCGICGDGGD-LICCDG-CPSTFHQNCLDIKKFPSGKWHCVYCSCQFCGRINE 863
G D C IC GD LI C+G C FH CL + P K+ C+ C G+
Sbjct: 696 GMSKKDTVCQICESSGDSLIPCEGECCKHFHLECLGLASLPDSKFICMECK---TGQHPC 752
Query: 864 STCHVNDQDDSALSTLQICSL--CEEKYHQSC 893
+C V+ +D ++ CS+ C + YH++C
Sbjct: 753 FSCKVSGKD------VKRCSVGACGKFYHEAC 778
>sp|Q04779|RCO1_YEAST Transcriptional regulatory protein RCO1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RCO1 PE=1 SV=1
Length = 684
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 29/59 (49%), Gaps = 6/59 (10%)
Query: 810 NDDTCGICGDGGDLICCDGCPSTFHQNCL----DIKKFPSGKWHCVYCSCQFCGRINES 864
N+D C C G +CCD CP +FH CL D P G WHC C+F IN S
Sbjct: 259 NEDFCSACNQSGSFLCCDTCPKSFHFLCLDPPIDPNNLPKGDWHC--NECKFKIFINNS 315
>sp|Q09819|YAC5_SCHPO Uncharacterized protein C16C9.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC16C9.05 PE=1 SV=1
Length = 404
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
Query: 810 NDDTCGICGDGGDLICCDGCPSTFHQNCLD----IKKFPSGKWHCVYCS 854
N D C CG G ICC+GCP +FH +CL+ + P G W CV CS
Sbjct: 116 NVDYCSACGGRGLFICCEGCPCSFHLSCLEPPLTPENIPEGSWFCVTCS 164
>sp|G5EBZ4|LE418_CAEEL Protein let-418 OS=Caenorhabditis elegans GN=let-418 PE=1 SV=1
Length = 1829
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 9/126 (7%)
Query: 807 EDPNDDTCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYCSCQFCGRINES 864
E N+D C C G+L+ CD CP +H C+D +++ P G W C +C + E
Sbjct: 252 EAENNDYCEECKQDGELLLCDTCPRAYHTVCIDENMEEPPEGDWSCAHCIEHGPEVVKEE 311
Query: 865 TCHVNDQDDSA---LSTLQICSLCEEKYHQSCSQTDGAVQYEPSSLSFCGKKCQEIF--E 919
ND+ L +C C +H C D + P ++ +C+ +
Sbjct: 312 PAKQNDEFCKICKETENLLLCDSCVCSFHAYC--IDPPLTEVPKEETWSCPRCETVKPEH 369
Query: 920 RLEKLL 925
++EK+L
Sbjct: 370 KIEKIL 375
>sp|Q96BD5|PF21A_HUMAN PHD finger protein 21A OS=Homo sapiens GN=PHF21A PE=1 SV=1
Length = 680
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 805 DGEDPNDDTCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYCSCQFCGR 860
DG D ++D C +C G L+ CD C +H +CLD +K P G W C C Q +
Sbjct: 483 DG-DIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQMLKK 539
>sp|Q9W0T1|NU301_DROME Nucleosome-remodeling factor subunit NURF301 OS=Drosophila
melanogaster GN=E(bx) PE=1 SV=2
Length = 2669
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 811 DDTCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYC 853
DD C +C GDL+CC+ CP+ +H C+D + P+ W C C
Sbjct: 339 DDHCRVCHRLGDLLCCETCPAVYHLECVDPPMNDVPTEDWQCGLC 383
>sp|Q9ULU4|PKCB1_HUMAN Protein kinase C-binding protein 1 OS=Homo sapiens GN=ZMYND8 PE=1
SV=2
Length = 1186
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 11/81 (13%)
Query: 784 ILDSWNKQDESKRKG-FHFVNFD-GEDP---------NDDTCGICGDGGDLICCDGCPST 832
+L+S NK+ R G F+++ DP ND C +C G ++CC+ CP
Sbjct: 50 LLNSNNKEQSELRHGPFYYMKQPLTTDPVDVVPQDGRNDFYCWVCHREGQVLCCELCPRV 109
Query: 833 FHQNCLDIKKFPSGKWHCVYC 853
+H CL + P G W C C
Sbjct: 110 YHAKCLRLTSEPEGDWFCPEC 130
>sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3 homolog
OS=Caenorhabditis elegans GN=chd-3 PE=2 SV=2
Length = 1787
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 810 NDDTCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYC 853
N D C IC + +++ CD CPS++H C+D + + P G+W C C
Sbjct: 327 NMDYCRICKETSNILLCDTCPSSYHAYCIDPPLTEIPEGEWSCPRC 372
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 18/134 (13%)
Query: 807 EDPNDDTCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYCS---------C 855
E+ + + C +C G+L+ CD C +H C+D +++ P G W C +C
Sbjct: 261 EENHQENCEVCNQDGELMLCDTCTRAYHVACIDENMEQPPEGDWSCPHCEEHGPDVLIVE 320
Query: 856 QFCGRINESTCHVNDQDDSALSTLQICSLCEEKYHQSCSQTDGAVQYEPSSLSFCGK-KC 914
+ + N C + + S + +C C YH C D + P C +
Sbjct: 321 EEPAKANMDYCRICKE----TSNILLCDTCPSSYHAYC--IDPPLTEIPEGEWSCPRCII 374
Query: 915 QEIFERLEKLLGVK 928
E +R+EK+L +
Sbjct: 375 PEPAQRIEKILSWR 388
>sp|Q9SIV5|C3H19_ARATH Zinc finger CCCH domain-containing protein 19 OS=Arabidopsis
thaliana GN=NERD PE=1 SV=3
Length = 1773
Score = 51.2 bits (121), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 5/63 (7%)
Query: 811 DDTCGICGDGGDLICCD--GCPSTFHQNCLDIKK--FPS-GKWHCVYCSCQFCGRINEST 865
+D C +C DGGDL+ CD GC +H +C+D + F + GKW+C + C C +
Sbjct: 599 EDVCFMCFDGGDLVLCDRRGCTKAYHPSCVDRDEAFFQTKGKWNCGWHLCSKCEKTATYL 658
Query: 866 CHV 868
C+
Sbjct: 659 CYT 661
>sp|Q6ZPK0|PF21A_MOUSE PHD finger protein 21A OS=Mus musculus GN=Phf21a PE=1 SV=2
Length = 659
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 805 DGEDPNDDTCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYCSCQFCGR 860
DG D ++D C +C G L+ CD C +H +CL+ +K P G W C C Q +
Sbjct: 463 DG-DIHEDFCSVCRKSGQLLMCDTCSRVYHLDCLEPPLKTIPKGMWICPRCQDQMLKK 519
>sp|Q20318|LIN49_CAEEL Protein lin-49 OS=Caenorhabditis elegans GN=lin-49 PE=1 SV=1
Length = 1042
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 56/136 (41%), Gaps = 11/136 (8%)
Query: 737 RIARDGIRCDCCSEIFTISKFDTHSKSKLCHPFQNLYFESGS-SLLQCILDSWNKQDESK 795
+I RD D +++ +FD S + L E S ++ + +D K K
Sbjct: 125 KIERDAKYVD-----YSVDEFDMSWMSIMNAKRTKLGLEIFSVAIYEHWVDRLEKMCIWK 179
Query: 796 RKGFHFVNFDGEDPNDDTCGICGDG-----GDLICCDGCPSTFHQNCLDIKKFPSGKWHC 850
K FH + + + DD C IC DG ++ CD C + HQ+C I P G C
Sbjct: 180 PKEFHKLKDENGEELDDVCNICLDGDTSNCNQIVYCDRCNLSVHQDCYGIPFIPEGCLEC 239
Query: 851 VYCSCQFCGRINESTC 866
C GR+N C
Sbjct: 240 RRCGISPAGRVNCVLC 255
>sp|Q9H930|LY10L_HUMAN Nuclear body protein SP140-like protein OS=Homo sapiens GN=SP140L
PE=2 SV=3
Length = 580
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 7/48 (14%)
Query: 810 NDDTCGICGDGGDLICCDGCPSTFHQNC----LDIKKFPSGKWHCVYC 853
N D C +C DGG+L CCD C FH++C ++ +K P W+C++C
Sbjct: 402 NLDECEVCRDGGELFCCDTCSRVFHEDCHIPPVESEKTP---WNCIFC 446
>sp|Q13342|LY10_HUMAN Nuclear body protein SP140 OS=Homo sapiens GN=SP140 PE=2 SV=2
Length = 867
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 7/48 (14%)
Query: 810 NDDTCGICGDGGDLICCDGCPSTFHQNC----LDIKKFPSGKWHCVYC 853
N D C +C DGG+L CCD C FH++C ++ ++ P W+C++C
Sbjct: 689 NLDECEVCRDGGELFCCDTCSRVFHEDCHIPPVEAERTP---WNCIFC 733
>sp|Q09698|YA27_SCHPO Uncharacterized protein C2F7.07c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2F7.07c PE=4 SV=1
Length = 607
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 810 NDDTCGICGDGGDLICCDGCPSTFHQNCLDI----KKFPSGKWHCVYC 853
N+D C C G+ +CC+ CP++FH C+D K P W+C C
Sbjct: 262 NNDYCSACHGPGNFLCCETCPNSFHFTCIDPPIEEKNLPDDAWYCNEC 309
>sp|Q8NEZ4|MLL3_HUMAN Histone-lysine N-methyltransferase MLL3 OS=Homo sapiens GN=MLL3 PE=1
SV=3
Length = 4911
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 812 DTCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYCS-CQFCGRINEST--- 865
+ CG D G L+ CD C ++H CLD ++ P G W C +C C+ CG +
Sbjct: 1011 EACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCVWCRHCGATSAGLRCE 1070
Query: 866 CHVNDQDDSALSTLQICSLCEEKYHQ 891
N + ++L C +C Y +
Sbjct: 1071 WQNNYTQCAPCASLSSCPVCYRNYRE 1096
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 811 DDTCGICGDGGDLI---CCDGCPSTFHQNCLDIKKFPSGK--WHCVYCS-CQFCGRINES 864
D C +C GDL+ C C +H CLDI P + W C C CQ C + E
Sbjct: 341 DANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECKVCQNCKQSGED 400
Query: 865 TCHVNDQDDSALSTLQICSLCEEKYHQSCSQ 895
S + +C C++ YH C Q
Sbjct: 401 ------------SKMLVCDTCDKGYHTFCLQ 419
>sp|Q9SD34|C3H44_ARATH Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis
thaliana GN=At3g51120 PE=2 SV=3
Length = 1292
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 13/78 (16%)
Query: 813 TCGICGDGGDLICCD--GCPSTFHQNCL--DIKKF-PSGKWHCVYCSCQFCGRINESTCH 867
C IC DGGDL+ CD CP +H C+ D F + KW+C + C C + + C+
Sbjct: 112 VCFICFDGGDLVLCDRRNCPKAYHPACIKRDEAFFRTTAKWNCGWHICGTCQKASSYMCY 171
Query: 868 VNDQDDSALSTLQICSLC 885
T +C C
Sbjct: 172 T--------CTFSVCKRC 181
>sp|Q12830|BPTF_HUMAN Nucleosome-remodeling factor subunit BPTF OS=Homo sapiens GN=BPTF
PE=1 SV=3
Length = 3046
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 811 DDTCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYC 853
DD C +C GDL+CC+ C + +H C+ +++ P +W C C
Sbjct: 390 DDHCRVCHKLGDLLCCETCSAVYHLECVKPPLEEVPEDEWQCEVC 434
>sp|O14686|MLL2_HUMAN Histone-lysine N-methyltransferase MLL2 OS=Homo sapiens GN=MLL2 PE=1
SV=2
Length = 5537
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 11/87 (12%)
Query: 813 TCGICGDGGD---LICCDGCPSTFHQNCLD--IKKFPSGKWHCVYC-SCQFCGRINESTC 866
C +CG D L+ CD C ++H CLD + P G W C +C SC CG +
Sbjct: 1429 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPG-F 1487
Query: 867 HVNDQDD----SALSTLQICSLCEEKY 889
H Q+ ++L C +C Y
Sbjct: 1488 HCEWQNSYTHCGPCASLVTCPICHAPY 1514
Score = 40.0 bits (92), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 21/102 (20%)
Query: 801 FVNFDGEDPNDDTCGICGDGG-----DLICCDGCPSTFHQNCLD--IKKFPSGK-WHCVY 852
F N D D C +CG G L+ C C +H C++ I K K W CV
Sbjct: 1367 FSNTDKFVLMQDMCVVCGSFGRGAEGHLLACSQCSQCYHPYCVNSKITKVMLLKGWRCVE 1426
Query: 853 C-SCQFCGRINESTCHVNDQDDSALSTLQICSLCEEKYHQSC 893
C C+ CG+ ++ S L +C C+ YH C
Sbjct: 1427 CIVCEVCGQASDP------------SRLLLCDDCDISYHTYC 1456
Score = 38.5 bits (88), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 33/86 (38%), Gaps = 18/86 (20%)
Query: 814 CGICGDGG---DLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYCS-CQFCGRINESTCH 867
C +C G DL C C +H CLD + W C C CQ C +
Sbjct: 229 CAVCEGPGELCDLFFCTSCGHHYHGACLDTALTARKRAGWQCPECKVCQACRKPG----- 283
Query: 868 VNDQDDSALSTLQICSLCEEKYHQSC 893
ND S + +C C++ YH C
Sbjct: 284 -ND------SKMLVCETCDKGYHTFC 302
>sp|Q6PDK2|MLL2_MOUSE Histone-lysine N-methyltransferase MLL2 OS=Mus musculus GN=Mll2 PE=1
SV=2
Length = 5588
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 38/87 (43%), Gaps = 11/87 (12%)
Query: 813 TCGICGDGGD---LICCDGCPSTFHQNCLD--IKKFPSGKWHCVYC-SCQFCGRINESTC 866
C +CG D L+ CD C ++H CLD + P G W C +C SC CG +
Sbjct: 1385 VCEVCGQASDPSRLLLCDDCDISYHTYCLDPPLLTVPKGGWKCKWCVSCMQCGAASPG-F 1443
Query: 867 HVNDQDD----SALSTLQICSLCEEKY 889
H Q+ ++L C +C Y
Sbjct: 1444 HCEWQNSYTHCGPCASLVTCPVCHAPY 1470
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 39/102 (38%), Gaps = 21/102 (20%)
Query: 801 FVNFDGEDPNDDTCGICGDGG-----DLICCDGCPSTFHQNCLD---IKKFPSGKWHCVY 852
F N D D C +CG G L+ C C +H C++ K W CV
Sbjct: 1323 FSNTDKFVLMQDMCVVCGSFGRGAEGHLLACSQCSQCYHPYCVNSKITKVMLLKGWRCVE 1382
Query: 853 C-SCQFCGRINESTCHVNDQDDSALSTLQICSLCEEKYHQSC 893
C C+ CG+ ++ S L +C C+ YH C
Sbjct: 1383 CIVCEVCGQASDP------------SRLLLCDDCDISYHTYC 1412
Score = 39.3 bits (90), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 34/86 (39%), Gaps = 18/86 (20%)
Query: 814 CGICGDGG---DLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYCS-CQFCGRINESTCH 867
C +C G DL+ C C +H CLD + W C C CQ C +
Sbjct: 229 CAVCEGPGQLCDLLFCTSCGHHYHGACLDTALTARKRASWQCPECKVCQSCRKPG----- 283
Query: 868 VNDQDDSALSTLQICSLCEEKYHQSC 893
ND S + +C C++ YH C
Sbjct: 284 -ND------SKMLVCETCDKGYHTFC 302
>sp|Q9HB58|SP110_HUMAN Sp110 nuclear body protein OS=Homo sapiens GN=SP110 PE=1 SV=5
Length = 689
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Query: 810 NDDTCGICGDGGDLICCDGCPSTFHQNC----LDIKKFPSGKWHCVYC 853
N D C +C GG L+CC CP FH++C ++ K+ W C +C
Sbjct: 533 NSDECEVCCQGGQLLCCGTCPRVFHEDCHIPPVEAKRM---LWSCTFC 577
>sp|Q8BRH4|MLL3_MOUSE Histone-lysine N-methyltransferase MLL3 OS=Mus musculus GN=Mll3 PE=2
SV=2
Length = 4903
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 812 DTCGICGDGGDLICCDGCPSTFHQNCLD--IKKFPSGKWHCVYCS-CQFCG 859
+ CG D G L+ CD C ++H CLD ++ P G W C +C C+ CG
Sbjct: 1004 EACGKATDPGRLLLCDDCDISYHTYCLDPPLQTVPKGGWKCKWCVWCRHCG 1054
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 37/91 (40%), Gaps = 18/91 (19%)
Query: 811 DDTCGICGDGGDLI---CCDGCPSTFHQNCLDIKKFPSGK--WHCVYCS-CQFCGRINES 864
D C +C GDL+ C C +H CLDI P + W C C CQ C + E
Sbjct: 340 DANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECKVCQNCKQSGED 399
Query: 865 TCHVNDQDDSALSTLQICSLCEEKYHQSCSQ 895
S + +C C++ YH C Q
Sbjct: 400 ------------SKMLVCDTCDKGYHTFCLQ 418
>sp|Q80Y84|KDM5B_MOUSE Lysine-specific demethylase 5B OS=Mus musculus GN=Kdm5b PE=1 SV=1
Length = 1544
Score = 47.4 bits (111), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 813 TCGICGDGGD---LICCDGCPSTFHQNCL--DIKKFPSGKWHCVYCSCQFCGRINESTCH 867
C +CG G D L+ CDGC ++H CL + P G W C C Q C + E+
Sbjct: 311 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLVPPLHDVPKGDWRCPKCLAQECNKPQEAFGF 370
Query: 868 VNDQDDSALSTL 879
D L T
Sbjct: 371 EQAARDYTLRTF 382
>sp|Q9UGL1|KDM5B_HUMAN Lysine-specific demethylase 5B OS=Homo sapiens GN=KDM5B PE=1 SV=3
Length = 1544
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 813 TCGICGDGGD---LICCDGCPSTFHQNCL--DIKKFPSGKWHCVYCSCQFCGRINESTCH 867
C +CG G D L+ CDGC ++H CL + P G W C C Q C + E+
Sbjct: 311 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQECSKPQEAFGF 370
Query: 868 VNDQDDSALSTL 879
D L T
Sbjct: 371 EQAARDYTLRTF 382
>sp|Q5F3R2|KDM5B_CHICK Lysine-specific demethylase 5B OS=Gallus gallus GN=KDM5B PE=2 SV=1
Length = 1522
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 813 TCGICGDGGD---LICCDGCPSTFHQNCL--DIKKFPSGKWHCVYCSCQFCGRINESTCH 867
C +CG G D L+ CDGC ++H CL + P G W C C Q C + E+
Sbjct: 286 VCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQECNKPQEAFGF 345
Query: 868 VNDQDDSALSTL 879
D L T
Sbjct: 346 EQAARDYTLRTF 357
>sp|P29375|KDM5A_HUMAN Lysine-specific demethylase 5A OS=Homo sapiens GN=KDM5A PE=1 SV=3
Length = 1690
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 786 DSWNKQDESKRKGFHFVNFDGEDPNDDTCGICGDGGD---LICCDGCPSTFHQNCL--DI 840
D++N Q +RKG VNF + C CG G + L+ CDGC ++H CL +
Sbjct: 273 DAFNMQ-MRQRKGTLSVNFV----DLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLIPPL 327
Query: 841 KKFPSGKWHCVYCSCQFCGRINES 864
P G W C C + C + E+
Sbjct: 328 PDVPKGDWRCPKCVAEECSKPREA 351
>sp|Q3UXZ9|KDM5A_MOUSE Lysine-specific demethylase 5A OS=Mus musculus GN=Kdm5a PE=1 SV=2
Length = 1690
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 10/84 (11%)
Query: 786 DSWNKQDESKRKGFHFVNFDGEDPNDDTCGICGDGGD---LICCDGCPSTFHQNCL--DI 840
D++N Q +RKG VNF + C CG G + L+ CDGC ++H CL +
Sbjct: 273 DAFNMQ-MRQRKGTLSVNFV----DLYVCMFCGRGNNEDKLLLCDGCDDSYHTFCLLPPL 327
Query: 841 KKFPSGKWHCVYCSCQFCGRINES 864
P G W C C + C + E+
Sbjct: 328 PDVPKGDWRCPKCVAEECNKPREA 351
>sp|P34447|YM2A_CAEEL Uncharacterized protein F54F2.2, isoform a OS=Caenorhabditis
elegans GN=F54F2.2/F54F2.3/F54F2.4 PE=2 SV=2
Length = 867
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 34/75 (45%), Gaps = 12/75 (16%)
Query: 814 CGICGD-----GGDLICCDG--CPSTFHQNCLDIKKFPSGKWHCVYC---SCQFCGRINE 863
C +C D LI CDG C HQ C I++ P G+W C C S G INE
Sbjct: 8 CCVCADENGWTDNPLIYCDGENCEVAVHQGCYGIQEVPEGEWFCAKCTKASAMMPGSINE 67
Query: 864 ST--CHVNDQDDSAL 876
+T C + D AL
Sbjct: 68 ATFCCQLCPFDYGAL 82
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 610,003,616
Number of Sequences: 539616
Number of extensions: 28256672
Number of successful extensions: 72253
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 808
Number of HSP's that attempted gapping in prelim test: 67565
Number of HSP's gapped (non-prelim): 4522
length of query: 1562
length of database: 191,569,459
effective HSP length: 131
effective length of query: 1431
effective length of database: 120,879,763
effective search space: 172978940853
effective search space used: 172978940853
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)