Query 000406
Match_columns 1560
No_of_seqs 620 out of 4440
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 07:29:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000406.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000406hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0055 Multidrug/pheromone ex 100.0 2E-198 5E-203 1866.7 124.1 1211 329-1555 12-1227(1228)
2 PTZ00265 multidrug resistance 100.0 7E-163 1E-167 1659.3 150.3 1209 328-1553 43-1465(1466)
3 KOG0054 Multidrug resistance-a 100.0 3E-159 6E-164 1547.0 128.9 1095 415-1554 261-1376(1381)
4 PLN03130 ABC transporter C fam 100.0 7E-150 2E-154 1544.5 146.6 1155 347-1556 303-1477(1622)
5 PLN03232 ABC transporter C fam 100.0 2E-148 3E-153 1533.9 144.6 1154 347-1556 303-1474(1495)
6 TIGR00957 MRP_assoc_pro multi 100.0 7E-145 2E-149 1499.3 149.0 1169 347-1553 319-1520(1522)
7 PTZ00243 ABC transporter; Prov 100.0 2E-139 4E-144 1439.9 147.7 1172 344-1556 243-1549(1560)
8 TIGR01271 CFTR_protein cystic 100.0 3E-137 6E-142 1419.0 146.2 1157 354-1558 89-1457(1490)
9 KOG0058 Peptide exporter, ABC 100.0 1E-101 2E-106 936.4 65.0 573 977-1555 133-706 (716)
10 KOG0058 Peptide exporter, ABC 100.0 1.9E-98 4E-103 908.4 69.1 572 331-913 134-707 (716)
11 KOG0055 Multidrug/pheromone ex 100.0 4.2E-96 9E-101 932.6 71.6 578 328-910 648-1225(1228)
12 COG2274 SunT ABC-type bacterio 100.0 5.2E-90 1.1E-94 872.8 70.5 567 978-1553 141-708 (709)
13 COG2274 SunT ABC-type bacterio 100.0 2.4E-84 5.1E-89 821.3 73.2 569 329-909 139-707 (709)
14 COG1132 MdlB ABC-type multidru 100.0 9.5E-83 2E-87 814.5 73.1 559 982-1555 7-566 (567)
15 PRK11174 cysteine/glutathione 100.0 1.6E-82 3.5E-87 816.7 75.5 568 979-1556 10-587 (588)
16 TIGR00958 3a01208 Conjugate Tr 100.0 4.8E-81 1E-85 814.5 72.7 563 978-1550 148-711 (711)
17 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.7E-80 3.7E-85 810.0 74.9 554 986-1553 131-685 (686)
18 COG4988 CydD ABC-type transpor 100.0 4.2E-80 9.1E-85 737.7 68.4 550 996-1555 5-557 (559)
19 TIGR01193 bacteriocin_ABC ABC- 100.0 3.6E-80 7.9E-85 809.6 72.9 562 979-1551 144-707 (708)
20 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 1.1E-79 2.3E-84 806.0 73.1 562 978-1550 141-709 (710)
21 PRK11160 cysteine/glutathione 100.0 3.5E-79 7.5E-84 780.3 74.0 564 981-1552 6-573 (574)
22 PTZ00265 multidrug resistance 100.0 1.9E-79 4.2E-84 838.7 76.1 570 331-910 812-1465(1466)
23 TIGR03375 type_I_sec_LssB type 100.0 3.7E-79 8E-84 798.4 74.0 558 979-1544 135-693 (694)
24 PRK11174 cysteine/glutathione 100.0 8.2E-79 1.8E-83 782.4 75.8 567 332-911 10-585 (588)
25 TIGR00958 3a01208 Conjugate Tr 100.0 1.4E-78 3.1E-83 791.2 75.2 564 330-906 147-710 (711)
26 PRK11176 lipid transporter ATP 100.0 4.4E-78 9.6E-83 775.1 73.8 565 980-1554 14-580 (582)
27 COG1132 MdlB ABC-type multidru 100.0 1.2E-77 2.7E-82 767.3 75.2 561 333-911 5-565 (567)
28 PRK10790 putative multidrug tr 100.0 1.2E-77 2.5E-82 771.9 74.6 565 981-1557 13-579 (592)
29 TIGR01846 type_I_sec_HlyB type 100.0 1.2E-77 2.6E-82 783.5 75.1 566 979-1554 127-693 (694)
30 COG4987 CydC ABC-type transpor 100.0 4.4E-78 9.6E-83 706.5 62.3 510 1036-1552 60-572 (573)
31 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 3.2E-77 6.9E-82 779.2 77.7 564 330-909 121-684 (686)
32 KOG0054 Multidrug resistance-a 100.0 2.8E-78 6E-83 788.8 61.2 572 326-908 797-1373(1381)
33 TIGR01193 bacteriocin_ABC ABC- 100.0 1.2E-76 2.7E-81 776.2 76.0 565 330-908 142-707 (708)
34 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2E-76 4.2E-81 775.2 75.8 564 331-907 141-709 (710)
35 TIGR02203 MsbA_lipidA lipid A 100.0 1.9E-76 4.2E-81 758.9 73.9 563 981-1553 4-568 (571)
36 KOG0057 Mitochondrial Fe/S clu 100.0 1.6E-77 3.4E-82 701.8 56.5 543 1004-1555 43-588 (591)
37 KOG0056 Heavy metal exporter H 100.0 1.6E-79 3.5E-84 697.7 36.5 500 1048-1553 273-774 (790)
38 TIGR00957 MRP_assoc_pro multi 100.0 1.8E-76 3.9E-81 818.9 74.0 569 328-909 948-1519(1522)
39 PRK13657 cyclic beta-1,2-gluca 100.0 1E-75 2.3E-80 752.7 75.7 562 980-1553 8-570 (588)
40 PRK11160 cysteine/glutathione 100.0 2.4E-75 5.2E-80 745.0 75.6 567 332-908 4-572 (574)
41 TIGR03375 type_I_sec_LssB type 100.0 2.5E-75 5.5E-80 762.3 75.6 556 331-899 134-689 (694)
42 TIGR02868 CydC thiol reductant 100.0 8.8E-76 1.9E-80 745.1 68.5 520 982-1511 4-529 (529)
43 TIGR02204 MsbA_rel ABC transpo 100.0 4.2E-75 9.1E-80 747.0 73.9 568 979-1553 6-575 (576)
44 TIGR01192 chvA glucan exporter 100.0 7E-75 1.5E-79 741.7 75.4 563 980-1554 8-571 (585)
45 PRK11176 lipid transporter ATP 100.0 9E-75 1.9E-79 744.5 76.5 565 333-910 14-579 (582)
46 COG4988 CydD ABC-type transpor 100.0 7.7E-75 1.7E-79 692.5 70.0 551 350-911 5-556 (559)
47 TIGR01846 type_I_sec_HlyB type 100.0 2.3E-74 4.9E-79 752.7 77.0 567 330-909 125-691 (694)
48 PLN03130 ABC transporter C fam 100.0 6.3E-75 1.4E-79 801.4 74.4 569 327-910 896-1474(1622)
49 PRK10790 putative multidrug tr 100.0 5.6E-74 1.2E-78 737.8 77.3 562 335-911 14-576 (592)
50 PRK10789 putative multidrug tr 100.0 1.2E-74 2.6E-79 738.4 70.0 541 1005-1554 9-551 (569)
51 TIGR02203 MsbA_lipidA lipid A 100.0 1.3E-73 2.8E-78 732.8 75.3 563 334-909 4-567 (571)
52 PTZ00243 ABC transporter; Prov 100.0 1E-73 2.2E-78 788.7 74.9 570 327-910 943-1546(1560)
53 PLN03232 ABC transporter C fam 100.0 8.1E-74 1.8E-78 791.4 72.0 569 327-910 893-1471(1495)
54 PRK13657 cyclic beta-1,2-gluca 100.0 1.1E-72 2.4E-77 724.6 77.1 564 332-910 7-570 (588)
55 TIGR01192 chvA glucan exporter 100.0 1.8E-72 3.9E-77 719.4 77.4 564 332-910 7-570 (585)
56 TIGR02868 CydC thiol reductant 100.0 3.7E-73 8.1E-78 721.1 70.6 524 335-870 4-529 (529)
57 TIGR02204 MsbA_rel ABC transpo 100.0 2.1E-72 4.6E-77 722.0 76.2 567 334-909 8-574 (576)
58 PRK10789 putative multidrug tr 100.0 1.3E-72 2.8E-77 719.8 73.1 540 361-911 11-551 (569)
59 TIGR02857 CydD thiol reductant 100.0 8.1E-73 1.8E-77 718.0 69.1 525 992-1523 4-529 (529)
60 COG5265 ATM1 ABC-type transpor 100.0 1.6E-75 3.5E-80 663.7 39.3 489 1057-1551 5-496 (497)
61 KOG0056 Heavy metal exporter H 100.0 5.7E-75 1.2E-79 660.6 35.2 502 406-912 273-776 (790)
62 COG1123 ATPase components of v 100.0 8.1E-74 1.8E-78 688.0 46.2 482 672-1552 5-531 (539)
63 TIGR01842 type_I_sec_PrtD type 100.0 3.3E-71 7.1E-76 704.3 71.4 536 990-1539 5-542 (544)
64 TIGR01271 CFTR_protein cystic 100.0 2E-71 4.3E-76 766.3 73.1 510 395-911 928-1453(1490)
65 TIGR02857 CydD thiol reductant 100.0 6E-71 1.3E-75 700.9 70.9 526 346-882 4-529 (529)
66 KOG0057 Mitochondrial Fe/S clu 100.0 1.7E-71 3.7E-76 651.1 60.0 543 358-910 43-586 (591)
67 COG4987 CydC ABC-type transpor 100.0 7.1E-71 1.5E-75 645.9 64.2 561 336-908 8-571 (573)
68 TIGR01842 type_I_sec_PrtD type 100.0 1.6E-69 3.4E-74 688.9 72.8 533 347-898 8-542 (544)
69 PRK10261 glutathione transport 100.0 1.5E-71 3.3E-76 713.7 50.9 502 672-1552 12-566 (623)
70 PRK13549 xylose transporter AT 100.0 2.6E-71 5.6E-76 698.8 45.7 462 672-1538 5-493 (506)
71 PRK15134 microcin C ABC transp 100.0 1.4E-70 3E-75 695.8 50.3 465 672-1540 5-516 (529)
72 PRK09700 D-allose transporter 100.0 4.7E-70 1E-74 688.5 46.8 457 672-1534 5-493 (510)
73 COG4618 ArpD ABC-type protease 100.0 1E-68 2.2E-73 621.1 52.4 536 992-1540 24-561 (580)
74 TIGR01257 rim_protein retinal- 100.0 1E-66 2.2E-71 707.5 80.5 220 671-899 927-1150(2272)
75 PRK10762 D-ribose transporter 100.0 1.3E-69 2.7E-74 682.7 47.6 454 672-1538 4-483 (501)
76 TIGR03269 met_CoM_red_A2 methy 100.0 1.2E-69 2.6E-74 686.4 44.2 457 673-1539 1-517 (520)
77 PRK11288 araG L-arabinose tran 100.0 1.9E-69 4E-74 681.2 45.6 456 672-1538 4-484 (501)
78 TIGR01194 cyc_pep_trnsptr cycl 100.0 1.7E-67 3.8E-72 670.2 63.7 531 979-1531 5-551 (555)
79 TIGR02633 xylG D-xylose ABC tr 100.0 6.1E-69 1.3E-73 677.2 48.4 459 673-1536 2-489 (500)
80 COG4172 ABC-type uncharacteriz 100.0 7.1E-69 1.5E-73 604.0 43.0 473 672-1551 6-528 (534)
81 PRK15439 autoinducer 2 ABC tra 100.0 9.1E-69 2E-73 675.3 49.2 465 672-1539 11-492 (510)
82 PRK10982 galactose/methyl gala 100.0 3.7E-68 8E-73 668.2 46.7 452 675-1536 1-477 (491)
83 TIGR01194 cyc_pep_trnsptr cycl 100.0 7.3E-66 1.6E-70 655.3 66.9 535 331-890 4-551 (555)
84 TIGR00956 3a01205 Pleiotropic 100.0 5.4E-67 1.2E-71 716.3 59.4 212 1313-1535 759-989 (1394)
85 COG5265 ATM1 ABC-type transpor 100.0 5E-68 1.1E-72 602.7 40.3 490 415-908 5-496 (497)
86 PRK10938 putative molybdenum t 100.0 2.1E-67 4.5E-72 661.7 43.5 452 672-1531 3-484 (490)
87 PRK15064 ABC transporter ATP-b 100.0 3.8E-66 8.2E-71 655.5 51.1 484 673-1539 2-525 (530)
88 COG4618 ArpD ABC-type protease 100.0 2.7E-65 5.9E-70 592.6 52.5 534 348-899 27-561 (580)
89 PRK11819 putative ABC transpor 100.0 4.3E-64 9.3E-69 638.7 56.1 482 672-1539 6-533 (556)
90 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 8.8E-64 1.9E-68 635.9 55.2 481 672-1539 4-531 (552)
91 PRK10522 multidrug transporter 100.0 1.2E-62 2.6E-67 625.8 63.1 527 983-1539 5-539 (547)
92 PLN03140 ABC transporter G fam 100.0 2.5E-62 5.5E-67 666.6 63.9 214 1312-1535 866-1106(1470)
93 PRK10636 putative ABC transpor 100.0 5.4E-63 1.2E-67 634.9 53.6 481 673-1539 2-517 (638)
94 PRK10522 multidrug transporter 100.0 2.7E-61 5.9E-66 613.4 66.9 524 337-895 6-536 (547)
95 PRK11147 ABC transporter ATPas 100.0 2.3E-61 4.9E-66 621.6 54.9 201 1313-1539 319-528 (635)
96 COG1129 MglA ABC-type sugar tr 100.0 4.2E-62 9.2E-67 583.6 44.1 452 672-1531 8-482 (500)
97 PLN03073 ABC transporter F fam 100.0 3.3E-61 7.1E-66 618.9 47.8 200 1313-1538 508-713 (718)
98 TIGR00954 3a01203 Peroxysomal 100.0 1.5E-58 3.3E-63 595.8 63.4 531 331-884 78-653 (659)
99 COG3845 ABC-type uncharacteriz 100.0 5.9E-60 1.3E-64 551.5 42.9 457 672-1536 4-489 (501)
100 TIGR00954 3a01203 Peroxysomal 100.0 2E-58 4.4E-63 594.6 61.5 527 979-1525 79-653 (659)
101 PRK13409 putative ATPase RIL; 100.0 1.1E-60 2.3E-65 604.7 39.3 436 677-1533 78-536 (590)
102 COG0488 Uup ATPase components 100.0 3.7E-59 8.1E-64 574.6 47.2 483 672-1539 3-525 (530)
103 cd03289 ABCC_CFTR2 The CFTR su 100.0 6.6E-51 1.4E-55 470.6 29.3 237 1313-1554 2-238 (275)
104 COG1126 GlnQ ABC-type polar am 100.0 2.8E-49 6.2E-54 417.9 20.3 218 672-899 2-226 (240)
105 COG1126 GlnQ ABC-type polar am 100.0 1E-47 2.2E-52 406.1 23.7 223 1313-1549 2-235 (240)
106 PRK14257 phosphate ABC transpo 100.0 1.7E-46 3.7E-51 444.6 28.3 230 1308-1540 75-314 (329)
107 COG1135 AbcC ABC-type metal io 100.0 3.9E-47 8.5E-52 420.8 19.7 221 673-900 2-233 (339)
108 COG1135 AbcC ABC-type metal io 100.0 1.3E-46 2.8E-51 416.7 23.2 229 1314-1553 2-245 (339)
109 cd03289 ABCC_CFTR2 The CFTR su 100.0 3.3E-46 7.3E-51 431.4 27.2 236 671-909 1-236 (275)
110 KOG0927 Predicted transporter 100.0 6.4E-46 1.4E-50 433.7 28.9 200 1312-1536 388-593 (614)
111 COG1117 PstB ABC-type phosphat 100.0 2E-46 4.3E-51 393.8 17.5 219 671-899 6-238 (253)
112 COG1125 OpuBA ABC-type proline 100.0 2.7E-46 5.9E-51 401.5 18.5 218 673-900 2-227 (309)
113 cd03252 ABCC_Hemolysin The ABC 100.0 1.4E-44 3.1E-49 412.4 29.3 236 1314-1552 1-236 (237)
114 COG1117 PstB ABC-type phosphat 100.0 2.6E-45 5.7E-50 385.3 20.5 219 1312-1540 6-238 (253)
115 KOG0065 Pleiotropic drug resis 100.0 1.2E-43 2.5E-48 451.9 37.9 198 1328-1535 803-1017(1391)
116 cd03288 ABCC_SUR2 The SUR doma 100.0 6.7E-44 1.4E-48 411.3 30.3 240 1311-1553 17-256 (257)
117 COG1125 OpuBA ABC-type proline 100.0 1.2E-44 2.6E-49 388.9 20.1 217 1314-1546 2-231 (309)
118 PRK14257 phosphate ABC transpo 100.0 5.1E-44 1.1E-48 423.6 26.3 224 668-899 76-314 (329)
119 cd03251 ABCC_MsbA MsbA is an e 100.0 4.1E-43 8.9E-48 399.6 28.0 233 1314-1549 1-233 (234)
120 cd03253 ABCC_ATM1_transporter 100.0 5.5E-43 1.2E-47 399.1 29.0 235 1314-1552 1-235 (236)
121 cd03252 ABCC_Hemolysin The ABC 100.0 4.4E-43 9.4E-48 400.2 27.4 234 673-907 1-234 (237)
122 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 6.6E-43 1.4E-47 398.9 28.6 236 1314-1551 1-236 (238)
123 COG4615 PvdE ABC-type sideroph 100.0 1.2E-40 2.6E-45 374.5 45.3 473 396-890 52-529 (546)
124 cd03244 ABCC_MRP_domain2 Domai 100.0 7.6E-43 1.7E-47 393.9 27.6 219 1313-1533 2-220 (221)
125 COG1120 FepC ABC-type cobalami 100.0 1.2E-43 2.6E-48 396.0 19.9 214 672-899 2-229 (258)
126 COG1127 Ttg2A ABC-type transpo 100.0 2.9E-43 6.2E-48 378.0 21.5 222 671-902 7-239 (263)
127 cd03254 ABCC_Glucan_exporter_l 100.0 1.5E-42 3.2E-47 393.8 28.3 225 1313-1539 2-226 (229)
128 TIGR02314 ABC_MetN D-methionin 100.0 5.8E-43 1.3E-47 415.0 26.0 228 1314-1552 2-243 (343)
129 COG3839 MalK ABC-type sugar tr 100.0 5.3E-43 1.2E-47 405.1 22.2 213 672-900 3-225 (338)
130 COG1136 SalX ABC-type antimicr 100.0 1.4E-42 3.1E-47 380.2 22.3 209 673-888 2-221 (226)
131 COG1120 FepC ABC-type cobalami 100.0 1.2E-42 2.6E-47 388.0 22.0 213 1313-1539 2-228 (258)
132 COG1116 TauB ABC-type nitrate/ 100.0 1.1E-42 2.5E-47 380.1 21.3 202 672-888 3-212 (248)
133 cd03251 ABCC_MsbA MsbA is an e 100.0 5E-42 1.1E-46 390.7 26.7 231 673-904 1-231 (234)
134 COG3842 PotA ABC-type spermidi 100.0 5.4E-43 1.2E-47 407.1 18.7 214 671-900 4-228 (352)
135 cd03245 ABCC_bacteriocin_expor 100.0 8E-42 1.7E-46 385.3 27.7 219 1313-1532 2-220 (220)
136 COG4178 ABC-type uncharacteriz 100.0 8.1E-39 1.7E-43 390.3 55.7 472 1036-1525 88-588 (604)
137 cd03254 ABCC_Glucan_exporter_l 100.0 6.4E-42 1.4E-46 388.5 26.6 227 671-899 1-227 (229)
138 COG2884 FtsE Predicted ATPase 100.0 1.2E-42 2.5E-47 359.2 18.2 207 673-892 2-220 (223)
139 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 6.8E-42 1.5E-46 390.6 26.4 233 673-905 1-233 (238)
140 COG3638 ABC-type phosphate/pho 100.0 1.4E-42 3.1E-47 371.7 19.2 216 672-897 3-236 (258)
141 COG3840 ThiQ ABC-type thiamine 100.0 1.7E-42 3.6E-47 354.6 18.7 210 673-900 2-221 (231)
142 COG1124 DppF ABC-type dipeptid 100.0 3E-42 6.4E-47 372.7 21.4 224 1313-1548 3-239 (252)
143 cd03253 ABCC_ATM1_transporter 100.0 1.1E-41 2.4E-46 388.5 27.1 232 673-906 1-232 (236)
144 PRK13631 cbiO cobalt transport 100.0 1.8E-41 3.8E-46 400.8 29.4 221 1312-1539 20-265 (320)
145 KOG0062 ATPase component of AB 100.0 4.8E-41 1E-45 391.1 32.2 215 1311-1558 360-579 (582)
146 cd03288 ABCC_SUR2 The SUR doma 100.0 1.8E-41 3.9E-46 391.1 28.1 237 669-907 16-253 (257)
147 COG1127 Ttg2A ABC-type transpo 100.0 9.2E-42 2E-46 366.4 22.7 228 1312-1553 7-248 (263)
148 COG3839 MalK ABC-type sugar tr 100.0 7.8E-42 1.7E-46 395.4 23.9 217 1313-1546 3-229 (338)
149 COG1122 CbiO ABC-type cobalt t 100.0 9.1E-42 2E-46 381.8 23.3 214 1313-1539 3-228 (235)
150 cd03244 ABCC_MRP_domain2 Domai 100.0 2.2E-41 4.8E-46 382.0 26.5 220 671-892 1-220 (221)
151 COG3638 ABC-type phosphate/pho 100.0 9.4E-42 2E-46 365.4 21.8 223 1313-1552 3-246 (258)
152 cd03261 ABC_Org_Solvent_Resist 100.0 1.4E-41 3E-46 387.2 24.7 212 1314-1539 1-226 (235)
153 cd03260 ABC_PstB_phosphate_tra 100.0 9E-42 2E-46 386.8 23.0 212 1314-1537 1-227 (227)
154 COG1122 CbiO ABC-type cobalt t 100.0 8.6E-42 1.9E-46 382.0 22.0 219 672-899 3-229 (235)
155 COG3840 ThiQ ABC-type thiamine 100.0 1.1E-41 2.3E-46 348.7 20.3 208 1314-1539 2-219 (231)
156 TIGR02314 ABC_MetN D-methionin 100.0 1.1E-41 2.4E-46 404.1 23.5 220 673-899 2-231 (343)
157 COG1136 SalX ABC-type antimicr 100.0 3.7E-41 8.1E-46 369.1 24.9 207 1314-1530 2-222 (226)
158 cd03248 ABCC_TAP TAP, the Tran 100.0 2.5E-41 5.3E-46 382.9 24.4 218 1311-1528 9-226 (226)
159 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.9E-41 4.1E-46 376.3 22.7 210 672-899 4-228 (254)
160 PRK14269 phosphate ABC transpo 100.0 4.2E-41 9E-46 385.8 26.2 217 1313-1539 2-230 (246)
161 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.8E-41 6E-46 374.9 23.7 209 1313-1539 4-227 (254)
162 PRK13650 cbiO cobalt transport 100.0 3.8E-41 8.2E-46 392.5 25.7 216 1313-1539 4-229 (279)
163 COG2884 FtsE Predicted ATPase 100.0 9.8E-42 2.1E-46 352.4 18.2 208 1314-1534 2-221 (223)
164 COG1124 DppF ABC-type dipeptid 100.0 2E-41 4.3E-46 366.3 20.8 218 672-899 3-232 (252)
165 COG4178 ABC-type uncharacteriz 100.0 9E-38 1.9E-42 381.1 54.9 503 353-883 55-587 (604)
166 cd03369 ABCC_NFT1 Domain 2 of 100.0 9.5E-41 2.1E-45 372.9 26.6 206 1309-1534 2-207 (207)
167 cd03245 ABCC_bacteriocin_expor 100.0 8.4E-41 1.8E-45 377.0 26.4 220 671-891 1-220 (220)
168 PRK11153 metN DL-methionine tr 100.0 6.7E-41 1.4E-45 400.4 26.2 227 1314-1551 2-242 (343)
169 PRK11432 fbpC ferric transport 100.0 6.1E-41 1.3E-45 399.9 25.3 212 1313-1540 6-227 (351)
170 PRK11650 ugpC glycerol-3-phosp 100.0 7.3E-41 1.6E-45 400.4 26.0 213 1313-1540 3-225 (356)
171 COG1118 CysA ABC-type sulfate/ 100.0 1.3E-41 2.7E-46 375.9 17.7 213 672-900 2-229 (345)
172 PRK14250 phosphate ABC transpo 100.0 1.8E-40 3.9E-45 379.3 27.7 224 1313-1550 3-231 (241)
173 COG1116 TauB ABC-type nitrate/ 100.0 4.5E-41 9.8E-46 367.6 21.1 197 1313-1528 3-211 (248)
174 PRK14242 phosphate transporter 100.0 1.3E-40 2.7E-45 383.6 25.9 219 1312-1540 5-238 (253)
175 cd03261 ABC_Org_Solvent_Resist 100.0 1.1E-40 2.4E-45 379.8 24.6 217 673-899 1-227 (235)
176 PRK13631 cbiO cobalt transport 100.0 1.2E-40 2.6E-45 393.7 25.7 221 672-899 21-266 (320)
177 TIGR03265 PhnT2 putative 2-ami 100.0 1.1E-40 2.4E-45 398.3 25.5 217 1313-1546 4-230 (353)
178 cd03296 ABC_CysA_sulfate_impor 100.0 1.2E-40 2.6E-45 380.4 24.3 210 1314-1539 3-226 (239)
179 cd03248 ABCC_TAP TAP, the Tran 100.0 1.3E-40 2.8E-45 377.1 24.2 219 669-887 8-226 (226)
180 TIGR01186 proV glycine betaine 100.0 1.1E-40 2.4E-45 397.5 24.8 211 1329-1550 6-230 (363)
181 PRK13647 cbiO cobalt transport 100.0 1.5E-40 3.2E-45 386.6 25.1 212 1313-1537 4-225 (274)
182 PRK13637 cbiO cobalt transport 100.0 3.8E-40 8.3E-45 385.4 28.8 217 1314-1539 3-234 (287)
183 PRK14273 phosphate ABC transpo 100.0 2.1E-40 4.5E-45 381.9 25.9 218 1313-1540 7-239 (254)
184 cd03219 ABC_Mj1267_LivG_branch 100.0 1.4E-40 3E-45 379.3 24.2 221 1314-1539 1-232 (236)
185 cd03256 ABC_PhnC_transporter A 100.0 1.7E-40 3.6E-45 379.9 24.7 213 1314-1539 1-234 (241)
186 COG3842 PotA ABC-type spermidi 100.0 4.7E-41 1E-45 390.9 20.3 219 1312-1547 4-233 (352)
187 PRK10744 pstB phosphate transp 100.0 4E-40 8.7E-45 380.7 28.0 220 1311-1540 11-245 (260)
188 cd03263 ABC_subfamily_A The AB 100.0 1.4E-40 3E-45 375.2 23.5 211 1314-1537 1-219 (220)
189 PRK13635 cbiO cobalt transport 100.0 2.2E-40 4.7E-45 386.0 25.8 215 1313-1539 5-229 (279)
190 TIGR00972 3a0107s01c2 phosphat 100.0 3.1E-40 6.7E-45 378.9 26.4 216 1314-1539 2-232 (247)
191 TIGR00960 3a0501s02 Type II (G 100.0 1E-40 2.3E-45 375.2 21.8 203 1314-1528 2-216 (216)
192 PRK09536 btuD corrinoid ABC tr 100.0 2.9E-40 6.2E-45 398.5 26.7 213 1313-1539 3-228 (402)
193 PRK13646 cbiO cobalt transport 100.0 4.5E-40 9.8E-45 384.9 27.4 219 1314-1539 3-235 (286)
194 cd03224 ABC_TM1139_LivF_branch 100.0 3E-40 6.5E-45 373.1 25.0 217 1314-1539 1-221 (222)
195 PRK10851 sulfate/thiosulfate t 100.0 2.6E-40 5.6E-45 395.2 25.8 212 1313-1540 2-227 (353)
196 PRK13643 cbiO cobalt transport 100.0 2.7E-40 5.8E-45 386.9 24.4 216 1314-1539 2-233 (288)
197 COG4615 PvdE ABC-type sideroph 100.0 1E-37 2.2E-42 351.0 43.9 470 1040-1531 54-529 (546)
198 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3E-40 6.5E-45 377.9 24.2 218 1314-1540 1-226 (242)
199 TIGR02315 ABC_phnC phosphonate 100.0 3.4E-40 7.3E-45 377.9 24.6 212 1314-1538 2-234 (243)
200 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.7E-39 3.8E-44 376.9 30.8 219 1311-1550 37-256 (282)
201 PRK13642 cbiO cobalt transport 100.0 5.3E-40 1.2E-44 382.7 26.6 216 1313-1539 4-229 (277)
202 PRK14235 phosphate transporter 100.0 5.7E-40 1.2E-44 380.6 26.6 219 1311-1539 17-251 (267)
203 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.7E-40 5.9E-45 383.5 23.9 218 1315-1547 26-257 (269)
204 PRK11432 fbpC ferric transport 100.0 3E-40 6.6E-45 393.9 25.0 216 672-899 6-227 (351)
205 PRK15079 oligopeptide ABC tran 100.0 5E-40 1.1E-44 389.9 26.6 228 1313-1551 8-263 (331)
206 PRK09452 potA putrescine/sperm 100.0 6.1E-40 1.3E-44 393.7 27.3 212 1313-1540 14-235 (375)
207 cd03260 ABC_PstB_phosphate_tra 100.0 2.2E-40 4.7E-45 375.5 22.1 214 673-896 1-227 (227)
208 PRK14267 phosphate ABC transpo 100.0 4.1E-40 9E-45 379.3 24.8 217 1313-1539 4-237 (253)
209 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 7.4E-40 1.6E-44 373.2 26.5 216 1314-1540 2-222 (236)
210 cd03259 ABC_Carb_Solutes_like 100.0 1.9E-40 4.2E-45 372.2 21.2 203 1314-1532 1-213 (213)
211 PRK11650 ugpC glycerol-3-phosp 100.0 3.1E-40 6.6E-45 395.1 24.1 217 672-899 3-225 (356)
212 PRK13636 cbiO cobalt transport 100.0 5.9E-40 1.3E-44 383.3 25.9 214 1313-1539 5-231 (283)
213 cd03258 ABC_MetN_methionine_tr 100.0 4.7E-40 1E-44 374.3 24.3 215 1314-1539 2-230 (233)
214 TIGR03005 ectoine_ehuA ectoine 100.0 7.1E-40 1.5E-44 377.1 25.7 213 1314-1540 1-237 (252)
215 PRK13634 cbiO cobalt transport 100.0 1E-39 2.2E-44 382.5 27.2 216 1314-1539 3-235 (290)
216 PRK13637 cbiO cobalt transport 100.0 7.5E-40 1.6E-44 383.0 25.9 220 672-898 2-234 (287)
217 PRK14259 phosphate ABC transpo 100.0 1.4E-39 3E-44 377.6 27.9 219 1312-1540 12-254 (269)
218 PRK11629 lolD lipoprotein tran 100.0 6.2E-40 1.4E-44 373.1 24.5 210 1313-1533 5-228 (233)
219 PRK14247 phosphate ABC transpo 100.0 6.8E-40 1.5E-44 376.9 25.0 217 1313-1539 3-234 (250)
220 cd03219 ABC_Mj1267_LivG_branch 100.0 3.5E-40 7.6E-45 376.1 22.3 221 673-898 1-232 (236)
221 PRK13650 cbiO cobalt transport 100.0 5.7E-40 1.2E-44 382.6 24.4 221 672-899 4-230 (279)
222 PRK14239 phosphate transporter 100.0 1E-39 2.2E-44 376.0 26.1 218 1313-1540 5-237 (252)
223 PRK14237 phosphate transporter 100.0 1.1E-39 2.5E-44 378.1 26.6 218 1312-1539 19-251 (267)
224 PRK11000 maltose/maltodextrin 100.0 8.5E-40 1.8E-44 393.9 26.4 212 1313-1540 3-224 (369)
225 TIGR03258 PhnT 2-aminoethylpho 100.0 7.3E-40 1.6E-44 391.8 25.5 213 1312-1540 4-229 (362)
226 PRK14274 phosphate ABC transpo 100.0 1E-39 2.3E-44 377.1 26.0 218 1313-1540 12-244 (259)
227 cd03218 ABC_YhbG The ABC trans 100.0 6.9E-40 1.5E-44 372.6 23.9 216 1314-1539 1-222 (232)
228 PRK14268 phosphate ABC transpo 100.0 1E-39 2.2E-44 377.0 25.6 218 1313-1540 12-243 (258)
229 PRK09493 glnQ glutamine ABC tr 100.0 1.1E-39 2.4E-44 372.8 25.5 217 1314-1540 2-226 (240)
230 PRK14248 phosphate ABC transpo 100.0 1.3E-39 2.8E-44 378.1 26.4 218 1313-1540 21-253 (268)
231 TIGR03265 PhnT2 putative 2-ami 100.0 4.4E-40 9.6E-45 393.3 23.0 216 672-899 4-225 (353)
232 cd03265 ABC_DrrA DrrA is the A 100.0 8.3E-40 1.8E-44 368.9 24.0 209 1314-1537 1-219 (220)
233 PRK11264 putative amino-acid A 100.0 2.5E-39 5.4E-44 372.2 28.4 227 1314-1550 4-244 (250)
234 PRK14244 phosphate ABC transpo 100.0 5.7E-40 1.2E-44 377.7 23.1 217 1314-1540 6-238 (251)
235 PRK13632 cbiO cobalt transport 100.0 9.2E-40 2E-44 379.7 25.0 215 1313-1539 7-231 (271)
236 cd03266 ABC_NatA_sodium_export 100.0 9.1E-40 2E-44 368.1 24.0 207 1314-1532 2-218 (218)
237 PRK13633 cobalt transporter AT 100.0 1.1E-39 2.4E-44 380.6 25.4 216 1313-1539 4-233 (280)
238 cd03264 ABC_drug_resistance_li 100.0 6.8E-40 1.5E-44 367.2 22.7 203 1314-1532 1-211 (211)
239 PRK14245 phosphate ABC transpo 100.0 1.1E-39 2.4E-44 375.0 25.1 218 1313-1540 3-235 (250)
240 cd03250 ABCC_MRP_domain1 Domai 100.0 1.3E-39 2.8E-44 363.0 24.7 200 1314-1527 1-204 (204)
241 cd03226 ABC_cobalt_CbiO_domain 100.0 4.7E-40 1E-44 366.8 21.2 199 1315-1529 1-205 (205)
242 PRK11831 putative ABC transpor 100.0 1.4E-39 3E-44 377.7 25.9 224 1313-1551 7-244 (269)
243 PRK13652 cbiO cobalt transport 100.0 1.3E-39 2.8E-44 379.4 25.7 213 1314-1539 4-227 (277)
244 PRK13651 cobalt transporter AT 100.0 1.1E-39 2.5E-44 383.2 25.3 216 1314-1539 3-254 (305)
245 PRK14249 phosphate ABC transpo 100.0 2.1E-39 4.7E-44 372.9 27.0 226 1313-1548 4-244 (251)
246 PRK13643 cbiO cobalt transport 100.0 8.5E-40 1.8E-44 382.7 24.1 219 673-898 2-233 (288)
247 PRK11308 dppF dipeptide transp 100.0 2E-39 4.3E-44 384.6 27.3 230 1313-1552 5-257 (327)
248 PRK10575 iron-hydroxamate tran 100.0 1.1E-39 2.4E-44 378.0 24.6 213 1313-1539 11-237 (265)
249 PRK14256 phosphate ABC transpo 100.0 2E-39 4.2E-44 373.4 26.6 229 1312-1550 3-247 (252)
250 PRK13640 cbiO cobalt transport 100.0 1.8E-39 3.8E-44 379.1 26.3 216 1312-1539 4-232 (282)
251 PRK14251 phosphate ABC transpo 100.0 1.2E-39 2.7E-44 374.9 24.6 217 1313-1539 4-235 (251)
252 PRK13646 cbiO cobalt transport 100.0 1.3E-39 2.8E-44 381.0 25.1 221 672-899 2-236 (286)
253 TIGR03411 urea_trans_UrtD urea 100.0 1.3E-39 2.8E-44 372.8 24.4 221 1314-1539 3-231 (242)
254 PRK10070 glycine betaine trans 100.0 1.2E-39 2.6E-44 392.9 25.3 211 1330-1551 42-266 (400)
255 PRK11231 fecE iron-dicitrate t 100.0 1.7E-39 3.7E-44 374.5 25.5 221 1314-1551 3-236 (255)
256 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 6.6E-40 1.4E-44 369.2 21.6 204 1314-1528 1-218 (218)
257 cd03268 ABC_BcrA_bacitracin_re 100.0 9.9E-40 2.1E-44 365.1 22.8 203 1314-1532 1-208 (208)
258 PRK14269 phosphate ABC transpo 100.0 1E-39 2.3E-44 374.2 23.6 217 672-898 2-230 (246)
259 PRK11614 livF leucine/isoleuci 100.0 1.7E-39 3.8E-44 370.5 25.2 218 1313-1539 5-226 (237)
260 PRK11153 metN DL-methionine tr 100.0 8.8E-40 1.9E-44 390.7 23.6 220 673-899 2-231 (343)
261 PRK14236 phosphate transporter 100.0 2.4E-39 5.2E-44 376.4 26.6 218 1312-1539 24-256 (272)
262 PRK10619 histidine/lysine/argi 100.0 2.3E-39 4.9E-44 373.9 26.2 215 1312-1539 4-241 (257)
263 PRK14240 phosphate transporter 100.0 2E-39 4.3E-44 373.0 25.5 217 1313-1539 3-234 (250)
264 PRK13634 cbiO cobalt transport 100.0 1.7E-39 3.7E-44 380.5 25.4 220 673-899 3-236 (290)
265 PRK14254 phosphate ABC transpo 100.0 3.2E-39 7E-44 377.0 27.5 228 1312-1549 38-279 (285)
266 TIGR01186 proV glycine betaine 100.0 5E-40 1.1E-44 391.9 21.0 205 688-899 6-220 (363)
267 cd03247 ABCC_cytochrome_bd The 100.0 1.4E-39 3.1E-44 354.6 22.8 178 1314-1532 1-178 (178)
268 TIGR02211 LolD_lipo_ex lipopro 100.0 1.5E-39 3.2E-44 367.1 23.6 205 1314-1529 2-220 (221)
269 cd03369 ABCC_NFT1 Domain 2 of 100.0 3E-39 6.4E-44 360.9 25.6 204 670-893 4-207 (207)
270 PRK14238 phosphate transporter 100.0 5E-39 1.1E-43 373.4 28.5 218 1313-1540 24-256 (271)
271 TIGR03258 PhnT 2-aminoethylpho 100.0 9.8E-40 2.1E-44 390.7 23.2 218 670-899 3-229 (362)
272 PRK14243 phosphate transporter 100.0 3.9E-39 8.5E-44 373.0 27.3 218 1313-1540 10-249 (264)
273 PRK14262 phosphate ABC transpo 100.0 2.3E-39 5.1E-44 372.4 25.2 217 1313-1539 3-234 (250)
274 PRK13537 nodulation ABC transp 100.0 1.8E-39 3.8E-44 382.5 24.7 212 1313-1539 7-227 (306)
275 cd03224 ABC_TM1139_LivF_branch 100.0 9.7E-40 2.1E-44 368.9 21.6 216 673-897 1-220 (222)
276 cd03301 ABC_MalK_N The N-termi 100.0 1.2E-39 2.6E-44 365.8 22.2 203 1314-1532 1-213 (213)
277 PRK10851 sulfate/thiosulfate t 100.0 1.3E-39 2.8E-44 389.2 23.8 216 672-899 2-227 (353)
278 cd03256 ABC_PhnC_transporter A 100.0 1.2E-39 2.6E-44 372.8 22.5 221 673-897 1-233 (241)
279 PRK14271 phosphate ABC transpo 100.0 6.3E-39 1.4E-43 373.1 28.8 218 1313-1540 21-252 (276)
280 PRK13644 cbiO cobalt transport 100.0 2.7E-39 5.8E-44 376.0 25.6 213 1314-1539 2-224 (274)
281 PRK14260 phosphate ABC transpo 100.0 2.5E-39 5.5E-44 373.8 25.2 218 1313-1540 7-244 (259)
282 PRK14270 phosphate ABC transpo 100.0 3.5E-39 7.5E-44 371.2 26.1 217 1313-1539 4-235 (251)
283 TIGR00972 3a0107s01c2 phosphat 100.0 2.3E-39 5E-44 371.7 24.4 217 672-898 1-232 (247)
284 TIGR03410 urea_trans_UrtE urea 100.0 1.5E-39 3.2E-44 369.4 22.6 212 1314-1538 1-220 (230)
285 PRK09473 oppD oligopeptide tra 100.0 5.3E-39 1.2E-43 381.3 28.2 230 1313-1551 12-263 (330)
286 PRK09452 potA putrescine/sperm 100.0 1.8E-39 3.8E-44 389.8 24.3 216 672-899 14-235 (375)
287 PRK11607 potG putrescine trans 100.0 2.3E-39 4.9E-44 389.6 25.2 217 1313-1546 19-245 (377)
288 TIGR02769 nickel_nikE nickel i 100.0 3.3E-39 7.1E-44 374.0 25.5 225 1314-1550 3-250 (265)
289 cd03296 ABC_CysA_sulfate_impor 100.0 2.1E-39 4.6E-44 370.1 23.6 215 672-898 2-226 (239)
290 PRK13649 cbiO cobalt transport 100.0 5.2E-39 1.1E-43 375.5 27.4 219 1314-1539 3-234 (280)
291 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.2E-39 2.6E-44 367.6 21.1 205 1314-1534 1-218 (220)
292 PRK14250 phosphate ABC transpo 100.0 2.4E-39 5.3E-44 369.9 23.8 216 672-899 3-222 (241)
293 PRK13648 cbiO cobalt transport 100.0 2.6E-39 5.7E-44 375.6 24.4 215 1313-1539 7-231 (269)
294 PRK11022 dppD dipeptide transp 100.0 4.4E-39 9.6E-44 381.7 26.8 230 1314-1551 4-255 (326)
295 PRK13647 cbiO cobalt transport 100.0 2.1E-39 4.6E-44 376.9 23.5 216 672-896 4-225 (274)
296 cd03259 ABC_Carb_Solutes_like 100.0 1.1E-39 2.4E-44 366.0 20.3 207 673-891 1-213 (213)
297 cd03225 ABC_cobalt_CbiO_domain 100.0 1.8E-39 4E-44 363.7 22.1 201 1315-1527 1-211 (211)
298 TIGR02673 FtsE cell division A 100.0 1.7E-39 3.8E-44 364.8 21.7 201 1314-1527 2-214 (214)
299 PRK14241 phosphate transporter 100.0 4.5E-39 9.8E-44 371.6 25.7 217 1313-1539 4-242 (258)
300 PRK10895 lipopolysaccharide AB 100.0 4.3E-39 9.2E-44 368.2 25.3 216 1314-1539 4-226 (241)
301 TIGR02315 ABC_phnC phosphonate 100.0 2.2E-39 4.8E-44 371.1 23.0 220 673-896 2-233 (243)
302 cd03292 ABC_FtsE_transporter F 100.0 2.4E-39 5.2E-44 363.6 22.7 202 1314-1528 1-214 (214)
303 PRK14261 phosphate ABC transpo 100.0 5.4E-39 1.2E-43 370.0 26.1 217 1313-1539 6-237 (253)
304 PRK13548 hmuV hemin importer A 100.0 6.2E-39 1.3E-43 370.1 26.6 212 1314-1539 3-230 (258)
305 cd03258 ABC_MetN_methionine_tr 100.0 1.9E-39 4.1E-44 369.3 22.0 219 673-898 2-230 (233)
306 PRK15112 antimicrobial peptide 100.0 5.2E-39 1.1E-43 372.5 26.1 230 1313-1553 4-253 (267)
307 PRK11124 artP arginine transpo 100.0 4.4E-39 9.5E-44 368.3 25.0 216 1314-1539 3-230 (242)
308 cd03263 ABC_subfamily_A The AB 100.0 1.5E-39 3.2E-44 367.0 20.7 215 673-896 1-219 (220)
309 PRK13651 cobalt transporter AT 100.0 2.8E-39 6.1E-44 380.0 23.9 221 672-899 2-255 (305)
310 PRK14242 phosphate transporter 100.0 2.6E-39 5.6E-44 372.7 23.1 217 672-898 6-237 (253)
311 PRK11247 ssuB aliphatic sulfon 100.0 4.4E-39 9.5E-44 369.8 24.9 204 1313-1535 12-219 (257)
312 PRK14273 phosphate ABC transpo 100.0 3.7E-39 7.9E-44 371.6 24.3 218 671-898 6-238 (254)
313 PRK10744 pstB phosphate transp 100.0 3.4E-39 7.4E-44 372.9 24.1 220 669-898 10-244 (260)
314 TIGR00960 3a0501s02 Type II (G 100.0 1.4E-39 3E-44 366.0 20.3 207 673-887 2-216 (216)
315 PRK10253 iron-enterobactin tra 100.0 4.6E-39 1E-43 372.8 25.2 214 1312-1539 6-233 (265)
316 PRK13537 nodulation ABC transp 100.0 2.4E-39 5.1E-44 381.4 23.1 217 671-898 6-227 (306)
317 PRK09536 btuD corrinoid ABC tr 100.0 3E-39 6.5E-44 389.6 24.5 217 672-899 3-229 (402)
318 cd03295 ABC_OpuCA_Osmoprotecti 100.0 1.8E-39 3.9E-44 371.4 21.4 217 673-898 1-225 (242)
319 PRK13641 cbiO cobalt transport 100.0 8.1E-39 1.8E-43 374.5 27.3 220 1313-1539 2-234 (287)
320 PRK14266 phosphate ABC transpo 100.0 6.1E-39 1.3E-43 369.0 25.8 217 1313-1539 3-234 (250)
321 TIGR00968 3a0106s01 sulfate AB 100.0 6.6E-39 1.4E-43 365.5 25.7 210 1314-1539 1-220 (237)
322 TIGR03873 F420-0_ABC_ATP propo 100.0 5.1E-39 1.1E-43 370.8 25.0 212 1314-1539 2-226 (256)
323 TIGR03415 ABC_choXWV_ATP choli 100.0 3E-39 6.6E-44 386.6 23.9 201 1329-1540 37-255 (382)
324 PRK14253 phosphate ABC transpo 100.0 6.4E-39 1.4E-43 368.6 25.7 217 1313-1539 3-233 (249)
325 PRK13638 cbiO cobalt transport 100.0 4.1E-39 8.9E-44 374.4 24.3 212 1314-1539 2-225 (271)
326 cd03218 ABC_YhbG The ABC trans 100.0 2.4E-39 5.3E-44 368.1 21.8 216 673-898 1-222 (232)
327 PRK13642 cbiO cobalt transport 100.0 5.8E-39 1.2E-43 374.0 25.5 221 672-899 4-230 (277)
328 PRK13636 cbiO cobalt transport 100.0 4.2E-39 9.2E-44 376.1 24.3 219 672-899 5-232 (283)
329 PRK14252 phosphate ABC transpo 100.0 7.7E-39 1.7E-43 371.0 26.2 219 1311-1539 14-249 (265)
330 cd03235 ABC_Metallic_Cations A 100.0 2E-39 4.3E-44 364.0 20.6 198 1315-1532 1-213 (213)
331 PRK13645 cbiO cobalt transport 100.0 5.3E-39 1.2E-43 376.8 25.1 221 1312-1539 5-240 (289)
332 PRK13635 cbiO cobalt transport 100.0 5.1E-39 1.1E-43 374.5 24.6 220 672-899 5-230 (279)
333 COG1118 CysA ABC-type sulfate/ 100.0 1.5E-39 3.3E-44 359.4 19.0 217 1313-1546 2-233 (345)
334 PRK11629 lolD lipoprotein tran 100.0 7.3E-39 1.6E-43 364.3 25.2 214 672-892 5-228 (233)
335 TIGR01288 nodI ATP-binding ABC 100.0 5.4E-39 1.2E-43 378.9 24.9 212 1313-1539 4-224 (303)
336 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 4.6E-39 9.9E-44 366.7 23.3 216 673-899 2-222 (236)
337 COG4175 ProV ABC-type proline/ 100.0 1.1E-39 2.3E-44 360.0 17.3 218 672-900 4-256 (386)
338 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.9E-39 4.1E-44 365.5 19.8 208 673-887 1-218 (218)
339 PRK14272 phosphate ABC transpo 100.0 1.3E-38 2.8E-43 366.8 27.1 218 1313-1540 4-237 (252)
340 PRK14265 phosphate ABC transpo 100.0 1.4E-38 3E-43 370.1 27.5 219 1312-1540 19-259 (274)
341 cd03300 ABC_PotA_N PotA is an 100.0 3.7E-39 7.9E-44 366.5 22.2 210 1314-1539 1-220 (232)
342 PRK11300 livG leucine/isoleuci 100.0 8.8E-39 1.9E-43 368.8 25.7 220 1313-1539 5-243 (255)
343 PRK10584 putative ABC transpor 100.0 6.9E-39 1.5E-43 363.4 24.3 208 1313-1531 6-227 (228)
344 PRK14258 phosphate ABC transpo 100.0 9.1E-39 2E-43 369.5 25.8 218 1313-1540 7-246 (261)
345 PRK13639 cbiO cobalt transport 100.0 5.2E-39 1.1E-43 374.0 23.8 213 1314-1539 2-226 (275)
346 PRK14235 phosphate transporter 100.0 5.1E-39 1.1E-43 372.6 23.6 219 670-898 17-251 (267)
347 PRK11000 maltose/maltodextrin 100.0 4.1E-39 8.8E-44 388.0 23.6 216 672-899 3-224 (369)
348 cd03266 ABC_NatA_sodium_export 100.0 3.3E-39 7.2E-44 363.5 21.2 211 673-891 2-218 (218)
349 cd03290 ABCC_SUR1_N The SUR do 100.0 9.8E-39 2.1E-43 359.6 25.0 210 1315-1527 2-218 (218)
350 PRK10908 cell division protein 100.0 8.1E-39 1.8E-43 361.3 24.3 204 1314-1530 2-217 (222)
351 cd03298 ABC_ThiQ_thiamine_tran 100.0 7.4E-39 1.6E-43 358.8 23.8 201 1314-1532 1-211 (211)
352 PRK14275 phosphate ABC transpo 100.0 1.2E-38 2.6E-43 372.6 26.3 218 1313-1540 39-271 (286)
353 PRK14263 phosphate ABC transpo 100.0 1.4E-38 2.9E-43 367.5 26.4 217 1313-1539 8-245 (261)
354 PRK15079 oligopeptide ABC tran 100.0 6.3E-39 1.4E-43 380.5 24.1 227 672-905 8-259 (331)
355 PRK14264 phosphate ABC transpo 100.0 1.5E-38 3.2E-43 375.0 26.9 217 1313-1539 45-289 (305)
356 cd03265 ABC_DrrA DrrA is the A 100.0 3.8E-39 8.2E-44 363.5 20.9 213 673-896 1-219 (220)
357 PRK11607 potG putrescine trans 100.0 8.4E-39 1.8E-43 384.6 25.2 217 671-899 18-240 (377)
358 cd03291 ABCC_CFTR1 The CFTR su 100.0 3.7E-38 8.1E-43 365.8 29.8 236 645-903 16-252 (282)
359 cd03246 ABCC_Protease_Secretio 100.0 8.1E-39 1.8E-43 347.0 22.6 172 1314-1528 1-173 (173)
360 cd03257 ABC_NikE_OppD_transpor 100.0 1.6E-38 3.4E-43 360.5 25.7 212 1314-1532 2-228 (228)
361 cd03250 ABCC_MRP_domain1 Domai 100.0 1.2E-38 2.6E-43 355.2 24.0 200 673-886 1-204 (204)
362 PRK11144 modC molybdate transp 100.0 9.5E-39 2.1E-43 383.1 24.9 218 1314-1548 2-227 (352)
363 PRK14259 phosphate ABC transpo 100.0 1.2E-38 2.6E-43 369.7 25.0 218 671-898 12-253 (269)
364 TIGR03522 GldA_ABC_ATP gliding 100.0 1.1E-38 2.5E-43 375.5 25.1 215 1314-1539 3-221 (301)
365 PRK10771 thiQ thiamine transpo 100.0 1.7E-38 3.7E-43 361.1 25.6 208 1314-1539 2-219 (232)
366 PRK14247 phosphate ABC transpo 100.0 9.5E-39 2.1E-43 367.4 23.7 219 672-898 3-234 (250)
367 cd03299 ABC_ModC_like Archeal 100.0 1.6E-38 3.6E-43 361.7 25.4 209 1314-1539 1-219 (235)
368 cd03269 ABC_putative_ATPase Th 100.0 6.9E-39 1.5E-43 358.8 21.8 205 1314-1532 1-210 (210)
369 PRK15093 antimicrobial peptide 100.0 1.7E-38 3.8E-43 377.9 26.6 230 1313-1551 3-260 (330)
370 cd03226 ABC_cobalt_CbiO_domain 100.0 5.3E-39 1.1E-43 358.3 20.6 199 674-888 1-205 (205)
371 PRK13641 cbiO cobalt transport 100.0 1.5E-38 3.2E-43 372.3 25.4 220 672-898 2-234 (287)
372 TIGR02769 nickel_nikE nickel i 100.0 8E-39 1.7E-43 370.8 22.8 221 672-899 2-241 (265)
373 PRK13644 cbiO cobalt transport 100.0 1.4E-38 3.1E-43 369.9 25.0 217 673-898 2-224 (274)
374 PRK11614 livF leucine/isoleuci 100.0 9.3E-39 2E-43 364.5 22.9 218 672-898 5-226 (237)
375 PRK09493 glnQ glutamine ABC tr 100.0 1.5E-38 3.2E-43 363.5 24.6 216 673-898 2-225 (240)
376 PRK14255 phosphate ABC transpo 100.0 1.6E-38 3.5E-43 365.9 25.1 217 1313-1539 5-236 (252)
377 PRK13649 cbiO cobalt transport 100.0 1.3E-38 2.7E-43 372.2 24.5 219 673-898 3-234 (280)
378 PRK10247 putative ABC transpor 100.0 8.5E-39 1.8E-43 361.7 22.3 210 1313-1535 7-223 (225)
379 PRK11264 putative amino-acid A 100.0 1.6E-38 3.6E-43 365.5 24.8 217 672-898 3-233 (250)
380 COG0410 LivF ABC-type branched 100.0 9.4E-39 2E-43 343.5 21.1 220 672-899 3-227 (237)
381 TIGR02211 LolD_lipo_ex lipopro 100.0 8.6E-39 1.9E-43 360.9 22.0 209 673-888 2-220 (221)
382 TIGR03411 urea_trans_UrtD urea 100.0 1.4E-38 3E-43 364.2 24.0 221 673-898 3-231 (242)
383 PRK13632 cbiO cobalt transport 100.0 1.6E-38 3.4E-43 369.4 24.8 219 672-898 7-231 (271)
384 PRK14267 phosphate ABC transpo 100.0 9.6E-39 2.1E-43 368.0 22.6 219 672-898 4-237 (253)
385 PRK13652 cbiO cobalt transport 100.0 1.9E-38 4.2E-43 369.6 25.3 219 672-899 3-228 (277)
386 TIGR01288 nodI ATP-binding ABC 100.0 9.8E-39 2.1E-43 376.7 23.0 216 672-898 4-224 (303)
387 cd03264 ABC_drug_resistance_li 100.0 8.7E-39 1.9E-43 358.3 21.5 207 673-891 1-211 (211)
388 PRK11831 putative ABC transpor 100.0 7.4E-39 1.6E-43 371.7 21.6 218 672-899 7-234 (269)
389 cd03262 ABC_HisP_GlnQ_permease 100.0 8.7E-39 1.9E-43 358.8 21.4 201 1314-1528 1-213 (213)
390 PRK13536 nodulation factor exp 100.0 1.9E-38 4.2E-43 377.3 25.3 216 1313-1539 41-261 (340)
391 PRK14246 phosphate ABC transpo 100.0 1.5E-38 3.4E-43 366.2 23.8 218 1313-1540 10-242 (257)
392 PRK14240 phosphate transporter 100.0 1.9E-38 4E-43 365.0 24.4 218 671-898 2-234 (250)
393 PRK10418 nikD nickel transport 100.0 2.5E-38 5.4E-43 364.5 25.5 228 1313-1554 4-245 (254)
394 PRK14274 phosphate ABC transpo 100.0 1.6E-38 3.6E-43 367.2 24.0 219 672-898 12-243 (259)
395 PRK10895 lipopolysaccharide AB 100.0 1.2E-38 2.6E-43 364.6 22.5 217 672-898 3-226 (241)
396 PRK11701 phnK phosphonate C-P 100.0 5.4E-38 1.2E-42 362.6 28.2 225 1313-1548 6-249 (258)
397 PRK13536 nodulation factor exp 100.0 1.3E-38 2.7E-43 378.9 23.5 216 672-898 41-261 (340)
398 cd03294 ABC_Pro_Gly_Bertaine T 100.0 7E-39 1.5E-43 371.7 20.7 215 674-898 26-250 (269)
399 PRK13547 hmuV hemin importer A 100.0 2.9E-38 6.2E-43 366.1 25.7 212 1314-1539 2-244 (272)
400 cd03268 ABC_BcrA_bacitracin_re 100.0 7.9E-39 1.7E-43 357.8 20.3 203 673-891 1-208 (208)
401 COG4555 NatA ABC-type Na+ tran 100.0 2.1E-39 4.6E-44 337.4 14.3 219 673-899 2-223 (245)
402 cd03293 ABC_NrtD_SsuB_transpor 100.0 8.3E-39 1.8E-43 360.7 20.3 209 673-893 1-218 (220)
403 TIGR01277 thiQ thiamine ABC tr 100.0 2.8E-38 6.1E-43 354.6 24.5 202 1314-1533 1-212 (213)
404 PRK14237 phosphate transporter 100.0 2E-38 4.2E-43 367.8 23.9 220 669-898 17-251 (267)
405 PRK14268 phosphate ABC transpo 100.0 1.4E-38 3.1E-43 367.3 22.6 219 672-898 12-242 (258)
406 TIGR01978 sufC FeS assembly AT 100.0 1.8E-38 3.9E-43 363.6 23.3 213 1314-1539 1-234 (243)
407 cd03257 ABC_NikE_OppD_transpor 100.0 1.3E-38 2.8E-43 361.2 21.8 213 673-891 2-228 (228)
408 TIGR03410 urea_trans_UrtE urea 100.0 1.1E-38 2.4E-43 362.3 21.2 214 673-896 1-219 (230)
409 PRK13645 cbiO cobalt transport 100.0 1.6E-38 3.4E-43 372.9 23.1 222 670-898 4-240 (289)
410 PRK10619 histidine/lysine/argi 100.0 1.5E-38 3.2E-43 367.1 22.5 218 671-898 4-241 (257)
411 cd03247 ABCC_cytochrome_bd The 100.0 1.4E-38 3E-43 346.8 21.0 178 673-891 1-178 (178)
412 PRK09984 phosphonate/organopho 100.0 2.6E-38 5.7E-43 366.1 24.6 223 1313-1553 4-252 (262)
413 cd03301 ABC_MalK_N The N-termi 100.0 1E-38 2.3E-43 358.2 20.5 207 673-891 1-213 (213)
414 PRK14248 phosphate ABC transpo 100.0 2.1E-38 4.5E-43 368.0 23.6 217 672-898 21-252 (268)
415 PRK11308 dppF dipeptide transp 100.0 1.6E-38 3.4E-43 376.9 22.9 227 672-905 5-252 (327)
416 PRK13648 cbiO cobalt transport 100.0 3.3E-38 7.1E-43 366.5 25.0 220 672-899 7-232 (269)
417 PRK10070 glycine betaine trans 100.0 1.7E-38 3.7E-43 382.8 23.4 221 672-899 4-255 (400)
418 PRK14249 phosphate ABC transpo 100.0 2.6E-38 5.7E-43 363.8 24.0 217 672-898 4-235 (251)
419 PRK13633 cobalt transporter AT 100.0 2.7E-38 5.9E-43 368.9 24.3 221 672-899 4-234 (280)
420 TIGR03522 GldA_ABC_ATP gliding 100.0 2.2E-38 4.9E-43 373.0 23.8 215 673-898 3-221 (301)
421 COG0410 LivF ABC-type branched 100.0 5.2E-38 1.1E-42 337.7 24.4 219 1313-1539 3-226 (237)
422 TIGR03415 ABC_choXWV_ATP choli 100.0 1.3E-38 2.8E-43 381.2 21.9 205 688-899 37-255 (382)
423 PRK10575 iron-hydroxamate tran 100.0 2.1E-38 4.6E-43 367.2 23.1 217 672-898 11-237 (265)
424 TIGR03005 ectoine_ehuA ectoine 100.0 1.4E-38 3.1E-43 366.3 21.5 216 673-898 1-236 (252)
425 PRK13640 cbiO cobalt transport 100.0 3.6E-38 7.8E-43 368.1 25.1 220 671-898 4-232 (282)
426 PRK14245 phosphate ABC transpo 100.0 1.8E-38 3.8E-43 365.1 22.0 219 672-898 3-234 (250)
427 PRK14239 phosphate transporter 100.0 2.5E-38 5.4E-43 364.4 23.1 220 672-899 5-237 (252)
428 TIGR01188 drrA daunorubicin re 100.0 1.9E-38 4.2E-43 374.0 22.5 199 1329-1539 6-213 (302)
429 PRK11300 livG leucine/isoleuci 100.0 2.6E-38 5.7E-43 364.8 23.2 222 672-898 5-243 (255)
430 PRK14251 phosphate ABC transpo 100.0 2E-38 4.4E-43 364.9 22.2 217 672-898 4-235 (251)
431 PRK11247 ssuB aliphatic sulfon 100.0 2.9E-38 6.3E-43 363.0 23.3 204 672-894 12-219 (257)
432 cd03234 ABCG_White The White s 100.0 2.1E-38 4.5E-43 359.0 21.8 214 1314-1532 4-226 (226)
433 PRK00349 uvrA excinuclease ABC 100.0 2.6E-37 5.6E-42 402.2 35.0 110 1441-1551 818-938 (943)
434 PRK14236 phosphate transporter 100.0 3.2E-38 6.9E-43 367.0 23.9 219 670-898 23-256 (272)
435 PRK11231 fecE iron-dicitrate t 100.0 2.5E-38 5.3E-43 364.9 22.7 216 673-898 3-227 (255)
436 PRK11124 artP arginine transpo 100.0 2.5E-38 5.3E-43 362.2 22.4 217 672-898 2-230 (242)
437 PRK13638 cbiO cobalt transport 100.0 3E-38 6.5E-43 367.2 23.4 217 673-899 2-226 (271)
438 cd03225 ABC_cobalt_CbiO_domain 100.0 1.4E-38 3E-43 356.6 19.7 205 674-886 1-211 (211)
439 cd03292 ABC_FtsE_transporter F 100.0 1.7E-38 3.6E-43 356.8 20.3 206 673-887 1-214 (214)
440 COG1131 CcmA ABC-type multidru 100.0 1.9E-38 4.1E-43 370.2 21.4 213 672-898 4-226 (293)
441 PRK14256 phosphate ABC transpo 100.0 3.9E-38 8.5E-43 362.6 23.7 219 670-898 2-236 (252)
442 PRK10253 iron-enterobactin tra 100.0 2.9E-38 6.3E-43 366.1 22.7 218 671-898 6-233 (265)
443 PRK13548 hmuV hemin importer A 100.0 5E-38 1.1E-42 362.5 24.3 217 672-898 2-230 (258)
444 PRK10908 cell division protein 100.0 5.4E-38 1.2E-42 354.6 24.0 208 673-889 2-217 (222)
445 TIGR02673 FtsE cell division A 100.0 2.3E-38 5E-43 355.6 20.9 205 673-886 2-214 (214)
446 PRK14243 phosphate transporter 100.0 4.8E-38 1E-42 363.9 24.2 217 672-898 10-248 (264)
447 PRK11022 dppD dipeptide transp 100.0 2.9E-38 6.3E-43 374.8 22.7 227 672-905 3-251 (326)
448 cd03269 ABC_putative_ATPase Th 100.0 1.7E-38 3.6E-43 355.7 19.2 205 673-891 1-210 (210)
449 PRK14244 phosphate ABC transpo 100.0 2.3E-38 4.9E-43 364.4 20.7 216 673-898 6-237 (251)
450 COG1131 CcmA ABC-type multidru 100.0 3.9E-38 8.4E-43 367.6 22.9 213 1313-1539 4-226 (293)
451 cd03290 ABCC_SUR1_N The SUR do 100.0 7.2E-38 1.6E-42 352.6 24.2 210 674-886 2-218 (218)
452 PRK13639 cbiO cobalt transport 100.0 4.5E-38 9.8E-43 366.1 23.2 217 673-898 2-226 (275)
453 PRK10419 nikE nickel transport 100.0 8.1E-38 1.8E-42 362.6 25.2 229 1314-1548 4-248 (268)
454 PRK09473 oppD oligopeptide tra 100.0 2.7E-38 5.9E-43 375.3 21.6 228 672-905 12-259 (330)
455 PRK14238 phosphate transporter 100.0 4.6E-38 9.9E-43 365.3 22.8 220 672-898 24-255 (271)
456 PRK11248 tauB taurine transpor 100.0 5.6E-38 1.2E-42 361.2 23.2 202 1314-1534 2-215 (255)
457 PRK14262 phosphate ABC transpo 100.0 4.5E-38 9.7E-43 361.8 22.2 217 672-898 3-234 (250)
458 PRK10584 putative ABC transpor 100.0 5.8E-38 1.3E-42 355.9 22.8 212 672-890 6-227 (228)
459 PRK14261 phosphate ABC transpo 100.0 5.3E-38 1.1E-42 361.8 22.8 219 672-898 6-237 (253)
460 TIGR03873 F420-0_ABC_ATP propo 100.0 4.6E-38 9.9E-43 362.8 22.2 221 673-898 2-226 (256)
461 cd03246 ABCC_Protease_Secretio 100.0 4.2E-38 9.2E-43 341.4 20.6 172 673-887 1-173 (173)
462 PRK10247 putative ABC transpor 100.0 5.3E-38 1.2E-42 355.2 22.2 213 672-894 7-223 (225)
463 cd03262 ABC_HisP_GlnQ_permease 100.0 4.9E-38 1.1E-42 352.7 21.8 205 673-887 1-213 (213)
464 PRK14270 phosphate ABC transpo 100.0 6.3E-38 1.4E-42 360.7 23.0 217 672-898 4-235 (251)
465 PRK14260 phosphate ABC transpo 100.0 6E-38 1.3E-42 362.4 22.8 218 671-898 6-243 (259)
466 PRK14253 phosphate ABC transpo 100.0 5.8E-38 1.3E-42 360.7 22.6 217 672-898 3-233 (249)
467 cd03235 ABC_Metallic_Cations A 100.0 2.3E-38 5.1E-43 355.3 18.8 202 674-891 1-213 (213)
468 TIGR02982 heterocyst_DevA ABC 100.0 7.9E-38 1.7E-42 352.7 23.2 204 1314-1528 2-219 (220)
469 TIGR02142 modC_ABC molybdenum 100.0 9E-38 1.9E-42 375.3 24.5 207 1318-1540 4-222 (354)
470 PRK14271 phosphate ABC transpo 100.0 7.1E-38 1.5E-42 364.3 22.8 220 672-899 21-252 (276)
471 PRK14254 phosphate ABC transpo 100.0 1.3E-37 2.8E-42 363.5 24.8 218 671-898 38-269 (285)
472 PRK14272 phosphate ABC transpo 100.0 8.7E-38 1.9E-42 359.9 22.7 220 672-899 4-237 (252)
473 PRK13547 hmuV hemin importer A 100.0 8E-38 1.7E-42 362.4 22.5 221 673-898 2-244 (272)
474 TIGR01188 drrA daunorubicin re 100.0 4.5E-38 9.7E-43 370.9 20.7 204 688-899 6-214 (302)
475 COG0444 DppD ABC-type dipeptid 100.0 6.9E-38 1.5E-42 353.8 21.1 231 1314-1552 2-256 (316)
476 PRK14266 phosphate ABC transpo 100.0 1E-37 2.3E-42 358.8 23.1 218 672-899 3-235 (250)
477 COG4175 ProV ABC-type proline/ 100.0 4.4E-38 9.5E-43 347.3 18.8 228 1313-1551 4-266 (386)
478 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.1E-37 2.5E-42 349.2 22.6 205 673-891 1-211 (211)
479 TIGR03740 galliderm_ABC gallid 100.0 1.2E-37 2.6E-42 352.0 22.9 205 1314-1536 1-210 (223)
480 COG4555 NatA ABC-type Na+ tran 100.0 4E-38 8.8E-43 327.9 17.4 212 1314-1539 2-222 (245)
481 PRK14265 phosphate ABC transpo 100.0 2.1E-37 4.5E-42 360.2 25.4 218 671-898 19-258 (274)
482 PRK11144 modC molybdate transp 100.0 1.1E-37 2.3E-42 374.1 23.6 211 673-900 2-220 (352)
483 COG1137 YhbG ABC-type (unclass 100.0 5.9E-39 1.3E-43 333.8 11.0 223 671-899 3-229 (243)
484 PRK14252 phosphate ABC transpo 100.0 1.5E-37 3.2E-42 360.3 23.6 220 669-898 13-249 (265)
485 PRK09984 phosphonate/organopho 100.0 1.5E-37 3.3E-42 359.7 23.7 220 672-896 4-240 (262)
486 PRK10771 thiQ thiamine transpo 100.0 2.3E-37 4.9E-42 351.9 24.6 214 673-899 2-220 (232)
487 cd03230 ABC_DR_subfamily_A Thi 100.0 1.4E-37 3E-42 337.4 21.7 170 1314-1528 1-173 (173)
488 PRK15093 antimicrobial peptide 100.0 8.6E-38 1.9E-42 372.0 21.9 227 672-905 3-256 (330)
489 cd03233 ABC_PDR_domain1 The pl 100.0 1.5E-37 3.3E-42 345.4 22.5 191 1313-1532 3-202 (202)
490 PRK14241 phosphate transporter 100.0 1.1E-37 2.4E-42 360.1 22.1 219 672-898 4-242 (258)
491 cd03234 ABCG_White The White s 100.0 9E-38 2E-42 353.7 20.9 214 673-891 4-226 (226)
492 PRK11701 phnK phosphonate C-P 100.0 1.3E-37 2.7E-42 359.6 22.4 217 672-898 6-241 (258)
493 PRK14255 phosphate ABC transpo 100.0 1.4E-37 3E-42 358.1 22.7 217 672-898 5-236 (252)
494 cd03228 ABCC_MRP_Like The MRP 100.0 1.9E-37 4.2E-42 335.5 22.3 171 1314-1527 1-171 (171)
495 TIGR01978 sufC FeS assembly AT 100.0 1.4E-37 3E-42 356.3 22.4 214 673-896 1-232 (243)
496 PRK15112 antimicrobial peptide 100.0 2.7E-37 5.8E-42 358.3 25.0 221 672-899 4-240 (267)
497 PRK14275 phosphate ABC transpo 100.0 1.4E-37 3E-42 363.7 22.7 219 671-899 38-271 (286)
498 cd03229 ABC_Class3 This class 100.0 1.7E-37 3.7E-42 338.2 21.9 172 1314-1527 1-178 (178)
499 PRK14258 phosphate ABC transpo 100.0 1.7E-37 3.7E-42 358.8 22.9 218 671-898 6-245 (261)
500 TIGR00968 3a0106s01 sulfate AB 100.0 1.2E-37 2.6E-42 355.1 21.3 214 673-898 1-220 (237)
No 1
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.3e-198 Score=1866.67 Aligned_cols=1211 Identities=45% Similarity=0.777 Sum_probs=1104.9
Q ss_pred cccHHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHH
Q 000406 329 PVGLFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMG 408 (1560)
Q Consensus 329 ~~~~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 408 (1560)
.+++..+++|..+.++.+++++.+++++.++.+|++.++++++.+.+..... . .....+..+++.++.++++.++.
T Consensus 12 ~~~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~---~-~~~~~~~~~~l~~~~lg~~~~~~ 87 (1228)
T KOG0055|consen 12 TVSFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTN---K-IASSEVSKVALYFVYLGVGVFIS 87 (1228)
T ss_pred ccchHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccc---h-hhHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999999999999999999999999999999999886542 1 22256677899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 409 AYLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVG 488 (1560)
Q Consensus 409 ~~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~ 488 (1560)
.+++..||.+.++|...++|..++++++|+++.|||.+ .+|++.+++++|++.|++.+++.+..+++.+.++++++++.
T Consensus 88 ~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~-~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~ 166 (1228)
T KOG0055|consen 88 GFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTN-STGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIG 166 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecc-cccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987 56999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHH
Q 000406 489 FLRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPF 568 (1560)
Q Consensus 489 ~~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~ 568 (1560)
|+..|+++++++.+.|++.+....+.+.+.+...+.+..++++.+++.|++.++|||.+|+.|+...++|.+.++...+.
T Consensus 167 F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~ 246 (1228)
T KOG0055|consen 167 FYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKF 246 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 569 GAKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFE 648 (1560)
Q Consensus 569 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~ 648 (1560)
+.+...+.++..++..++.++.+++.+|||..++..+..++|.+++++++++..+..|++..+.+..+.++.+|+.+|++
T Consensus 247 gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~ 326 (1228)
T KOG0055|consen 247 GIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFE 326 (1228)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHccCCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCC
Q 000406 649 IIDRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPT 728 (1560)
Q Consensus 649 ~l~~~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~ 728 (1560)
.+++.|+.++....+......+|.|+|+||+|+||++++.++|+|+||+|++|+++||||+|||||||++++|.|+|+|+
T Consensus 327 ~i~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~ 406 (1228)
T KOG0055|consen 327 TIDRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT 406 (1228)
T ss_pred HhcCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 99998887765533334445789999999999999999889999999999999999999999999999999999999999
Q ss_pred ccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCC
Q 000406 729 KGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDR 808 (1560)
Q Consensus 729 ~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~ 808 (1560)
+|+|++||.|+++++.+++|++||+|.|+|.||++||+|||.||.|+++.+++.++|+++++++||..+|+|++|.+|++
T Consensus 407 ~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~ 486 (1228)
T KOG0055|consen 407 SGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGER 486 (1228)
T ss_pred CceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEE
Q 000406 809 GTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVV 888 (1560)
Q Consensus 809 g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv 888 (1560)
|.+|||||||||||||||+++|+||||||||||||+++|+.|+++|++..+|+|.|+|+|||+++++||+|+||++|+|+
T Consensus 487 g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~Iv 566 (1228)
T KOG0055|consen 487 GVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIV 566 (1228)
T ss_pred CCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecChhhHhhhcchHHHHHHHHHhhccCcc-ccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhhHh
Q 000406 889 EIGNHRQLLERGGAYHDLVKLASEAVSQPQ-SKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQTVEE 967 (1560)
Q Consensus 889 ~~G~~~~l~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 (1560)
|.|+|+||++..|.|.++++.+........ ..+++... ....+. ..+. . ..................+.++
T Consensus 567 E~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~-----~~~~s~-~~s~-~-~~~~~~~~~~~~~~~~~~~~e~ 638 (1228)
T KOG0055|consen 567 EQGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLKE-----ERSRSL-KSSS-S-SPSLSRGSNRSNLLSVKPEGED 638 (1228)
T ss_pred EecCHHHHHhccchHHHHHHHHhhhhhhhccccccchhh-----hhhhcc-cccc-c-cccccCCccccccccccccccc
Confidence 999999999999999999998754432111 00000000 000000 0000 0 0000000000000000000000
Q ss_pred hh--hCCCCchhhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHH
Q 000406 968 EQ--QKPRPRKFQLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGF 1045 (1560)
Q Consensus 968 ~~--~~~~~~~~~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1045 (1560)
.. .........+.+++++.++.++.++++.+.+++.++..+++.++++.++..+..............|.++++++++
T Consensus 639 ~~~~~~~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~ 718 (1228)
T KOG0055|consen 639 PEEPVSEEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGI 718 (1228)
T ss_pred cccccccccccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHH
Confidence 00 0111145568899999999999999999999999999999999999999999865544455555569999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1046 GCIIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAA 1125 (1560)
Q Consensus 1046 ~~~~~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i 1125 (1560)
...++.+++.+++.++++++..++|..+|+++++++++|||.++|. |.|.+|+.+|...++..+...+..++.++.+++
T Consensus 719 ~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~ 797 (1228)
T KOG0055|consen 719 VSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVI 797 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999 999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhh-hhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHH
Q 000406 1126 VGLGVSLVLNWRLTLVAAALTPFTLGASYLSLIINVGPKID-NSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKAL 1204 (1560)
Q Consensus 1126 ~~l~~~~~~~~~l~lv~l~~ipl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~ 1204 (1560)
+++++.|+++|+++++++++.|++++..+...+.......+ ...+.++...+.|++++++||++|++|+++.+.|.+.+
T Consensus 798 ~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l 877 (1228)
T KOG0055|consen 798 IGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEEL 877 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHH
Confidence 99999999999999999999999999988877766655544 67789999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Q 000406 1205 SEPKKKSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATA 1284 (1560)
Q Consensus 1205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s 1284 (1560)
++..+...++..+.++.+++++.++++.+++.+|+|.+++..|.+++..++.+++.+.+....+.+...+.|++.++..+
T Consensus 878 ~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~A 957 (1228)
T KOG0055|consen 878 EKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIA 957 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhccCCcccccc-ccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHh
Q 000406 1285 IPAVLQITKRKPLIDNVK-GRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQ 1363 (1560)
Q Consensus 1285 ~~ri~~i~~~~~~~~~~~-~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~ 1363 (1560)
+.+++++++++|..+... .......-.|.|+|+||+|+||.+|+.+||+|+||+|++|+++||||||||||||++.||.
T Consensus 958 a~~iF~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLe 1037 (1228)
T KOG0055|consen 958 AGSIFEILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLE 1037 (1228)
T ss_pred HHHHHHHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHH
Confidence 999999999998766543 2212223357899999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccEEEECCEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCcc
Q 000406 1364 RFYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYE 1443 (1560)
Q Consensus 1364 rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gld 1443 (1560)
|||+|++|.|.|||+||+++++++||++|++|.|||.||++||||||.||...++.+||.+|++.|++|+||.+||+|||
T Consensus 1038 RfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyD 1117 (1228)
T KOG0055|consen 1038 RFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYD 1117 (1228)
T ss_pred HhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCccc
Confidence 99999999999999999999999999999999999999999999999999656899999999999999999999999999
Q ss_pred ccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEE
Q 000406 1444 TQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVV 1523 (1560)
Q Consensus 1444 t~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVL 1523 (1560)
|.|||+|.+|||||||||||||||+|||+|||||||||+||.++|+.||++|++...+||+|+|||||+||++||.|+|+
T Consensus 1118 T~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi 1197 (1228)
T KOG0055|consen 1118 TRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVL 1197 (1228)
T ss_pred CccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCEEEEecCHHHHHhhccChHHHHHHHHhhh
Q 000406 1524 RDGAVVEYGSHETLLASHLNGVYASLVRAETE 1555 (1560)
Q Consensus 1524 d~G~IvE~Gt~~eLl~~~~~g~y~~l~~~q~~ 1555 (1560)
++|+|+|+|+|++|++ ++|.|++|++.|..
T Consensus 1198 ~~G~VvE~GtH~~L~~--~~G~Y~~Lv~~q~~ 1227 (1228)
T KOG0055|consen 1198 KNGKVVEQGTHDELLA--KRGIYFRLVQLQSS 1227 (1228)
T ss_pred ECCEEEecccHHHHHh--CCCchHHHhhhccC
Confidence 9999999999999998 78999999998853
No 2
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=6.6e-163 Score=1659.25 Aligned_cols=1209 Identities=29% Similarity=0.479 Sum_probs=1011.9
Q ss_pred CcccHHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHH
Q 000406 328 KPVGLFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMM 407 (1560)
Q Consensus 328 ~~~~~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 407 (1560)
.+++++.+|+|..+.+++.++++++++++.+++.|+++++++.+++.+... . .+..+++++++++++.++
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~---~-------~~~~~~~~~~~~~i~~~~ 112 (1466)
T PTZ00265 43 QKIPFFLPFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLG---E-------NVNDIIFSLVLIGIFQFI 112 (1466)
T ss_pred ccccHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---c-------hHHHHHHHHHHHHHHHHH
Confidence 567899999999998899999999999999999999999999999976421 0 122344556677778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 408 GAYLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTV 487 (1560)
Q Consensus 408 ~~~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii 487 (1560)
+.+++.+++.++++++..++|.++|++++++|+.|||.. ++|+++++++.|++.+++.+...+..++..++++++++++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~-~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~ 191 (1466)
T PTZ00265 113 LSFISSFCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNN-PGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIW 191 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999876 8899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhH
Q 000406 488 GFLRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIP 567 (1560)
Q Consensus 488 ~~~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~ 567 (1560)
+|+++|.|++++++++|+++++..++.+......++.....++..+.+.|+++|+++||+|+.|+.+.++|.+..+...+
T Consensus 192 ~~~~sw~Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~ 271 (1466)
T PTZ00265 192 SLFKNARLTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSK 271 (1466)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999988888887777777778899999999999999999999999999999999888888
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 568 FGAKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARK--------ELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQG 639 (1560)
Q Consensus 568 ~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g--------~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a 639 (1560)
...+.....++..++..++.++.+++++|+|.+++..| .+++|.+++++++++.....+..+.+.+..+..+
T Consensus 272 ~~~k~~~~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a 351 (1466)
T PTZ00265 272 YILKANFMESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKS 351 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88898888888888888888999999999999999875 5788988888777766666677777888999999
Q ss_pred HHHHHHHHHHHccCCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHH
Q 000406 640 TVAATRVFEIIDRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFA 719 (1560)
Q Consensus 640 ~~a~~Ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ 719 (1560)
..|++|++++++.+++.++ ...+...+ ..+.|+++||+|+|+++++.++|+|+||+|++||++|||||||||||||++
T Consensus 352 ~~a~~ri~~ii~~~~~~~~-~~~~~~~~-~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~ 429 (1466)
T PTZ00265 352 LEATNSLYEIINRKPLVEN-NDDGKKLK-DIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILK 429 (1466)
T ss_pred HHHHHHHHHHHcCCCCCCC-CCCCccCC-CCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHH
Confidence 9999999999998765432 11111112 224799999999998654457999999999999999999999999999999
Q ss_pred HHhcCCCCCccEEEE-CCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCC------------------------
Q 000406 720 LIERFYDPTKGLITL-DGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKE------------------------ 774 (1560)
Q Consensus 720 ll~g~~~~~~G~I~i-~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~------------------------ 774 (1560)
+|+|+|+|++|+|++ ||.++++++..++|++|+||+|+|.||++||+|||.+|..
T Consensus 430 lL~gl~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (1466)
T PTZ00265 430 LIERLYDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKN 509 (1466)
T ss_pred HHHHhccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhcccccccccccccccc
Confidence 999999999999999 5799999999999999999999999999999999999742
Q ss_pred ---------------------------------CCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHH
Q 000406 775 ---------------------------------NATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIA 821 (1560)
Q Consensus 775 ---------------------------------~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRia 821 (1560)
..++++++++|+.+++++++..+|+|++|.+|++|.+|||||||||+
T Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRia 589 (1466)
T PTZ00265 510 KRNSCRAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRIS 589 (1466)
T ss_pred ccccccccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHH
Confidence 13467889999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCccccccCCEEEEEeCC--------------
Q 000406 822 LARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKNANTIVVLDQG-------------- 885 (1560)
Q Consensus 822 lARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~~D~i~vl~~G-------------- 885 (1560)
|||||+++|+|||||||||+||+++++.+++.|+++. +|+|+|+||||++++..||+|++|++|
T Consensus 590 IARAll~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~ 669 (1466)
T PTZ00265 590 IARAIIRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGED 669 (1466)
T ss_pred HHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCcccccccccccccc
Confidence 9999999999999999999999999999999999885 489999999999999889999999986
Q ss_pred ---------------------------------eEEEecChhhHhh-hcchHHHHHHHHHhhccCcccc--chhcc-ccc
Q 000406 886 ---------------------------------SVVEIGNHRQLLE-RGGAYHDLVKLASEAVSQPQSK--QKDAK-RGI 928 (1560)
Q Consensus 886 ---------------------------------~iv~~G~~~~l~~-~~~~~~~l~~~~~~~~~~~~~~--~~~~~-~~~ 928 (1560)
+|+|+|+|+||++ .+|.|+.+++.+.......... ..... ...
T Consensus 670 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~ 749 (1466)
T PTZ00265 670 PTKDNKENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSS 749 (1466)
T ss_pred ccccccccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhccccccccccccccccccccc
Confidence 5999999999998 6899999997653321111000 00000 000
Q ss_pred chhhhhhhH-HHhhhh---hhhhhhhhhhhhhhhHHHh-hhhHhh-h-----h---CCCCchhhHHHHHHhhhhhHHHHH
Q 000406 929 EFSIYEKSV-IEVSRS---RYANEVSKSKYFKSMQAEI-QTVEEE-Q-----Q---KPRPRKFQLSEIWKLQRPEFAMII 994 (1560)
Q Consensus 929 ~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~-~-----~---~~~~~~~~~~~l~~~~~~~~~~l~ 994 (1560)
......... .+.... ........... .....+. .+.+.. . + ........+..++++.++++..++
T Consensus 750 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 828 (1466)
T PTZ00265 750 AYKDSERGYDPDEMNGNSKHENESASNKKS-CKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKDVT 828 (1466)
T ss_pred cccccccccccccccccccccccccccccc-cccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHHHH
Confidence 000000000 000000 00000000000 0000000 000000 0 0 000111134455666677777788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 995 FGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGWAGTKLTMRVRELLF 1074 (1560)
Q Consensus 995 ~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~Lr~~l~ 1074 (1560)
++++++++.+++.+++|++++.+++.++... ........+.+++++++++..++.+++.++..+++.++..++|..+|
T Consensus 829 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf 906 (1466)
T PTZ00265 829 IIALSILVAGGLYPVFALLYAKYVSTLFDFA--NLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLF 906 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888899999999999999988766421 12223445677777778888888899999999999999999999999
Q ss_pred HHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1075 RSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTLVAAALTPFTLGASY 1154 (1560)
Q Consensus 1075 ~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~lv~l~~ipl~~~~~~ 1154 (1560)
++++++++.|||.+++++|++++|+++|++.++..+...+..++..++.++++++++++++|.++++++++++++.....
T Consensus 907 ~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~ 986 (1466)
T PTZ00265 907 ENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFA 986 (1466)
T ss_pred HHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999977789999999999999999999999999999999999999999999999998877655444432222
Q ss_pred HHHHHhcchhh----------------hhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHH
Q 000406 1155 LSLIINVGPKI----------------DNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQIL 1218 (1560)
Q Consensus 1155 ~~~~~~~~~~~----------------~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 1218 (1560)
.........+. .++...+....+.|++.|+++||+|+.|+.+.++|.+..++..+...+...+.
T Consensus 987 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 1066 (1466)
T PTZ00265 987 IRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVN 1066 (1466)
T ss_pred HHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 21111000000 12234566788999999999999999999999999999999998888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCcc
Q 000406 1219 GLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLI 1298 (1560)
Q Consensus 1219 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~ 1298 (1560)
++..++.+++.++..++++|+|++++..|.+++|.+++++.++.+...++..+..+++++..+..+.+|++++++.+++.
T Consensus 1067 ~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~ 1146 (1466)
T PTZ00265 1067 SMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNI 1146 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcC
Confidence 99999999999999999999999999999999999998887766666678889999999999999999999999876543
Q ss_pred ccc--ccccc--CCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC------
Q 000406 1299 DNV--KGRKL--ERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP------ 1368 (1560)
Q Consensus 1299 ~~~--~~~~~--~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p------ 1368 (1560)
+.. ..... .....+.|+|+||+|+||++++.+||+|+||+|+|||++||||+||||||||+++|+|||+|
T Consensus 1147 ~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~ 1226 (1466)
T PTZ00265 1147 DVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHI 1226 (1466)
T ss_pred CCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccc
Confidence 211 11110 11123579999999999876556799999999999999999999999999999999999999
Q ss_pred ------------------------------------------------CccEEEECCEecCCCCHHHHhhceEEEcCCCC
Q 000406 1369 ------------------------------------------------NQGKVMIEGVDLREINVKWLRKQTALVGQEPA 1400 (1560)
Q Consensus 1369 ------------------------------------------------~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~ 1400 (1560)
++|+|+|||+|++++++++||++|+||||||+
T Consensus 1227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~ 1306 (1466)
T PTZ00265 1227 VFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPM 1306 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCc
Confidence 69999999999999999999999999999999
Q ss_pred CCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCC
Q 000406 1401 LFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEAS 1480 (1560)
Q Consensus 1401 LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaT 1480 (1560)
||+|||||||.+|.|+++++||++|++.+++++||.+||+||||.|||+|.+|||||||||||||||+|+|+||||||||
T Consensus 1307 LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaT 1386 (1466)
T PTZ00265 1307 LFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEAT 1386 (1466)
T ss_pred cccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhhcCEEEEEeC----CEE-EEecCHHHHHhhccChHHHHHHHHh
Q 000406 1481 SALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIREANMIAVVRD----GAV-VEYGSHETLLASHLNGVYASLVRAE 1553 (1560)
Q Consensus 1481 SaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~aDrIlVLd~----G~I-vE~Gt~~eLl~~~~~g~y~~l~~~q 1553 (1560)
|+||++||+.|+++|++.. +++|+|+||||+++++.||+|+||++ |++ +|.|+|+||+++ ++|.|++|++.|
T Consensus 1387 SaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~-~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1387 SSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSV-QDGVYKKYVKLA 1465 (1466)
T ss_pred cccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhc-CCChHHHHHhhc
Confidence 9999999999999999874 68999999999999999999999999 995 489999999972 489999999876
No 3
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.8e-159 Score=1546.97 Aligned_cols=1095 Identities=23% Similarity=0.334 Sum_probs=878.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchhhcc---CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 415 CWRLVGERSAQRIRTKYLRAVLRQDIAFFDT---EVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLR 491 (1560)
Q Consensus 415 ~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~---~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~ 491 (1560)
.+.+...+.+.++|..+...++++-+..-.. ..+.|+++|.++.|+++++++.. +++.++...+.++++.++
T Consensus 261 ~~~~~~~~~g~r~R~al~~~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~-----~~h~~w~~Plqi~~~l~l 335 (1381)
T KOG0054|consen 261 QYFFVSFRVGMRLRSALISAIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAAC-----FLHLLWSAPLQIILALYL 335 (1381)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
Confidence 3455777888999999888888887776532 23789999999999999999864 677788888877777777
Q ss_pred HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhH
Q 000406 492 SWKV----SLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIP 567 (1560)
Q Consensus 492 s~~l----~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~ 567 (1560)
.|.. +++.++++.+++.++.++.+...+.+.+..+..+++.+.++|.++|||+||+|+||+.|.++.++.++++.+
T Consensus 336 Ly~~LG~sa~~G~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~ 415 (1381)
T KOG0054|consen 336 LYGLLGPSALAGVAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELK 415 (1381)
T ss_pred HHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHH
Confidence 7764 455566667777788888999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 568 FGAKLGFAKGAGMGVIYLVTYATWALAFWYGSIL-VARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRV 646 (1560)
Q Consensus 568 ~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l-v~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri 646 (1560)
...|....+++...+......+..++.| +.+. ...+.+++..+|+++.++.....|+..++..+.++.++.++++|+
T Consensus 416 ~lrk~~~~~~~~~~~~~~~p~lv~~~tF--~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri 493 (1381)
T KOG0054|consen 416 LLRKSAYLSALNSFLNFFSPVLVSVVTF--VVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRL 493 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999888877776665555444333 3343 456678998999999999999999999999999999999999999
Q ss_pred HHHHccCCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC
Q 000406 647 FEIIDRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD 726 (1560)
Q Consensus 647 ~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~ 726 (1560)
.+|+..+ |.++.........+.+..|+++|.+|+|+...+.+.|+||||+|++|+++||||+.|||||||+.+|+|+++
T Consensus 494 ~~fl~~~-e~~~~~~~~~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~ 572 (1381)
T KOG0054|consen 494 KEFLLSE-ELDPDSVERSPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMP 572 (1381)
T ss_pred HHHhcCc-ccCccccccCCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcc
Confidence 9999863 333322211122233457999999999986444558999999999999999999999999999999999999
Q ss_pred CCccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccC
Q 000406 727 PTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVG 806 (1560)
Q Consensus 727 ~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~ 806 (1560)
..+|+|.++| .++||||+||+|++||||||+||.+. +.++..++.+.|.++++++.||.|+.|.+|
T Consensus 573 ~~sG~v~v~g-------------siaYv~Q~pWI~ngTvreNILFG~~~-d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIG 638 (1381)
T KOG0054|consen 573 KLSGSVAVNG-------------SVAYVPQQPWIQNGTVRENILFGSPY-DEERYDKVIKACALKKDLEILPFGDLTEIG 638 (1381)
T ss_pred cccceEEEcC-------------eEEEeccccHhhCCcHHHhhhcCccc-cHHHHHHHHHHccCHhHHhhcCCCCcceec
Confidence 9999999998 49999999999999999999999875 556677777888999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHH-HHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCC
Q 000406 807 DRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESES-IVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQG 885 (1560)
Q Consensus 807 ~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~-~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G 885 (1560)
|+|.+|||||||||+||||+|++++|+|||+|+||||+++.+ .+.++|+.+.++||+|+|||.++.+++||+|++|++|
T Consensus 639 ErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G 718 (1381)
T KOG0054|consen 639 ERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDG 718 (1381)
T ss_pred CCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCC
Confidence 999999999999999999999999999999999999999755 5667888888899999999999999999999999999
Q ss_pred eEEEecChhhHhhhcchHHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhh
Q 000406 886 SVVEIGNHRQLLERGGAYHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQTV 965 (1560)
Q Consensus 886 ~iv~~G~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 965 (1560)
+|++.|+++|+++....|.++..........+ ......+.. + ............... ..+..+..+.. +.+..
T Consensus 719 ~I~~~Gty~el~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~-~-~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~ 791 (1381)
T KOG0054|consen 719 KIVESGTYEELLKSGGDFAELAHEEESEQEEE-ASEKDLESG-E-SSRESESRSLESLSS--EEEKSKDEKEE--EDKLV 791 (1381)
T ss_pred eEecccCHHHHHhcchhHHHHhhccchhhccc-ccccccccc-c-cccchhhhhhhhhcc--cccccccccch--hhHHH
Confidence 99999999999988888877733221111110 000000000 0 000000000000000 00000000000 00000
Q ss_pred HhhhhCCCCchhhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhh--hhHHHHHHHHHHH
Q 000406 966 EEEQQKPRPRKFQLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLR--RDVRYLSLALVGL 1043 (1560)
Q Consensus 966 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~l 1043 (1560)
.+++...+.+.+..++.|.+...+.+...+++ +..++...+......++..|.+....... ....++.++|.++
T Consensus 792 --~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~--~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l 867 (1381)
T KOG0054|consen 792 --QEEERETGKVSWSVYKKYIKAAGGFLLVLLIL--LLFVLTQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALL 867 (1381)
T ss_pred --HHHHHhcCEeeHHHHHHHHHhcccHHHHHHHH--HHHHHHHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHH
Confidence 11112445566677777776633333222211 11112222223333444445443322221 3456788889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 000406 1044 GFGCIIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSS 1123 (1560)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~ 1123 (1560)
+++..++..++.+.+...+.+++.+||+.+++++++.||+||| .+|+|+|+|||++|++.+|..++..+..++..++.
T Consensus 868 ~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFd--tTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~ 945 (1381)
T KOG0054|consen 868 GVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFD--TTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLN 945 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcC--CCCccchhhhcccchHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999998 79999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----hhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHH
Q 000406 1124 AAVGLGVSLVLNWRLTLVAAALTPFTLGASYLSLIINVG----PKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINS 1199 (1560)
Q Consensus 1124 ~i~~l~~~~~~~~~l~lv~l~~ipl~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~ 1199 (1560)
++..++++.+..|++.+ +++|+.++++++..++... ++.+...+++..++++|++.|+.|||+|+.+++|.++
T Consensus 946 ~l~~~~vi~~~~P~fli---~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~ 1022 (1381)
T KOG0054|consen 946 VLGILVVISYVTPWFLI---AIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQE 1022 (1381)
T ss_pred HHHHHHHhhHHhHHHHH---HHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHH
Confidence 98888888887776644 4455555555554444333 3334557888999999999999999999999999999
Q ss_pred HHHHHhhhHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHH
Q 000406 1200 FDKALSEPKKKSVK---RSQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAP 1276 (1560)
Q Consensus 1200 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~ 1276 (1560)
+....|.+.+..+. .++|.++...+...++.+..++. +.+...+.++.|.+...+.+.......++.++....
T Consensus 1023 ~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~----~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~ 1098 (1381)
T KOG0054|consen 1023 NDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALF----AVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSS 1098 (1381)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999887654 56666666655433332222221 112222226678888888888888888999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCccc---cccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCC
Q 000406 1277 DTSMAATAIPAVLQITKRKPLID---NVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGS 1353 (1560)
Q Consensus 1277 ~~~~~~~s~~ri~~i~~~~~~~~---~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGS 1353 (1560)
+++..++++||+.++.+.++|.+ +...++..||..|.|+|+|++.+|.++ .++|||||||+|+|||||||||||||
T Consensus 1099 elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRTGa 1177 (1381)
T KOG0054|consen 1099 ELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRTGA 1177 (1381)
T ss_pred HHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCCCC
Confidence 99999999999999998766511 112256678989999999999999755 56899999999999999999999999
Q ss_pred CHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHH
Q 000406 1354 GKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHK 1433 (1560)
Q Consensus 1354 GKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~ 1433 (1560)
|||||+++|+|+.+|.+|+|.|||+||+++++++||+++++|||||+||+||||+||||.+ +.+|++||+||++|+|++
T Consensus 1178 GKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf~-e~sD~~IW~ALe~~~Lk~ 1256 (1381)
T KOG0054|consen 1178 GKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPFD-EYSDDEIWEALERCQLKD 1256 (1381)
T ss_pred CHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCccc-ccCHHHHHHHHHHhChHH
Confidence 9999999999999999999999999999999999999999999999999999999999965 789999999999999999
Q ss_pred HHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHH
Q 000406 1434 FISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLST 1513 (1560)
Q Consensus 1434 ~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlst 1513 (1560)
+|.++|.|||++|.|+|.|||.||||++||||||||++||||||||||++|++|+..||++||+.|++||||+||||++|
T Consensus 1257 ~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~T 1336 (1381)
T KOG0054|consen 1257 VVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNT 1336 (1381)
T ss_pred HHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccch
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCEEEEEeCCEEEEecCHHHHHhhccChHHHHHHHHhh
Q 000406 1514 IREANMIAVVRDGAVVEYGSHETLLASHLNGVYASLVRAET 1554 (1560)
Q Consensus 1514 i~~aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~~l~~~q~ 1554 (1560)
|.+||||+|||+|+|+|+|+|++|++ ++++.|++++.+..
T Consensus 1337 Vmd~DrVlVld~G~v~EfdsP~~Ll~-~~~S~f~~~l~~~~ 1376 (1381)
T KOG0054|consen 1337 VMDSDRVLVLDAGRVVEFDSPAELLS-DKDSLFSSLLKEAA 1376 (1381)
T ss_pred hhhcCeEEEeeCCeEeecCChHHHHh-CCcchHHHHHHHHH
Confidence 99999999999999999999999998 47899987776654
No 4
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=7.4e-150 Score=1544.54 Aligned_cols=1155 Identities=18% Similarity=0.240 Sum_probs=846.7
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 347 VLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLEITCWRLVGERSAQR 426 (1560)
Q Consensus 347 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~ 426 (1560)
+++++++.++..++....+++++.+++.+.... . . .......+++++ ..++..++..-.......++.++...
T Consensus 303 ~~~~~~~~i~~~~~~~~~P~ll~~li~~v~~~~--~--~--~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~ir~~ 375 (1622)
T PLN03130 303 FWLGGFFKIGNDLSQFVGPLLLNLLLESMQNGE--P--A--WIGYIYAFSIFV-GVVLGVLCEAQYFQNVMRVGFRLRST 375 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--c--c--hHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555556666666667778888888765321 1 0 111111111111 11111111100111133567777788
Q ss_pred HHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 427 IRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLRSWKVSLVVLSVTPLM 506 (1560)
Q Consensus 427 lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~s~~l~lv~l~~~pl~ 506 (1560)
++..+++++++++..+++.. ++|+++|++++|++.+++.+. .+..++...+.+++++++++......+++.++++.++
T Consensus 376 L~~~i~~k~L~l~~~~~~~~-~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~ 453 (1622)
T PLN03130 376 LVAAVFRKSLRLTHEGRKKF-TSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLM 453 (1622)
T ss_pred HHHHHHHHHhcCChhhcCCC-CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999654 899999999999999999874 3444444444444433333322112222222233344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhHHHHHHHHHHHHHHHH
Q 000406 507 MFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKLGFAKGAGMGVIYLV 586 (1560)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 586 (1560)
+.+..++.+...+..++..+..++..+.+.|.++|+++||+|+||+.+.+++.+.++++.+...+......+...+...+
T Consensus 454 ~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~ 533 (1622)
T PLN03130 454 FPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSI 533 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556667777777788888888999999999999999999999999999999999888777666666555444333222
Q ss_pred HHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcC
Q 000406 587 TYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIIDRVPEIDPYNSEGRKL 666 (1560)
Q Consensus 587 ~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~~~~~~~~~~~~~~~~ 666 (1560)
.. .+.++++|++++.+|.++++.+++++.++..+..|+..++..+..+.++.++++||.++++.++.... . .. ..
T Consensus 534 ~~--~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~-~-~~-~~ 608 (1622)
T PLN03130 534 PV--LVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLL-P-NP-PL 608 (1622)
T ss_pred HH--HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccc-c-CC-cc
Confidence 21 23455678888889999999999999888888889999888999999999999999999975432111 0 10 01
Q ss_pred CCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCc-cEEEECCeecCCccHH
Q 000406 667 SSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTK-GLITLDGHDLKSLQVK 745 (1560)
Q Consensus 667 ~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~-G~I~i~g~~i~~~~~~ 745 (1560)
.+..+.|+++|++|+|+.++++++|+|+||+|++||+++||||||||||||+++|+|+++|++ |+|.+.
T Consensus 609 ~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l~---------- 678 (1622)
T PLN03130 609 EPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVIR---------- 678 (1622)
T ss_pred cCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEEc----------
Confidence 112357999999999985444679999999999999999999999999999999999999999 999854
Q ss_pred HHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHH
Q 000406 746 WLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARA 825 (1560)
Q Consensus 746 ~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARA 825 (1560)
++|+||+|+||||++||||||.||.+. +++++.++++.|+++++++.||+|++|.+|++|.+|||||||||+||||
T Consensus 679 ---~~Iayv~Q~p~LfngTIreNI~fg~~~-d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARA 754 (1622)
T PLN03130 679 ---GTVAYVPQVSWIFNATVRDNILFGSPF-DPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARA 754 (1622)
T ss_pred ---CeEEEEcCccccCCCCHHHHHhCCCcc-cHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHH
Confidence 579999999999999999999999874 6788999999999999999999999999999999999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHH-HHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhhcchHH
Q 000406 826 MIKDPRILLLDEPTSALDSESESIV-QQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLERGGAYH 904 (1560)
Q Consensus 826 l~~~p~illLDEpts~LD~~~~~~i-~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~~~~~~ 904 (1560)
+|++|+||||||||||||+++++.+ .++++...+++|+|+|||+++.+..||+|++|++|+|++.|++++++++.+.|.
T Consensus 755 ly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~~~~~~ 834 (1622)
T PLN03130 755 VYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNNGPLFQ 834 (1622)
T ss_pred HhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhcchhHH
Confidence 9999999999999999999998866 567777778999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhhHhhhhCCCCchhhHHHHHH
Q 000406 905 DLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQTVEEEQQKPRPRKFQLSEIWK 984 (1560)
Q Consensus 905 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 984 (1560)
++...........+.......... ......... ........+.....+.......+ +++ ...+.+.+..++.
T Consensus 835 ~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~e~---~~~g~v~~~vy~~ 906 (1622)
T PLN03130 835 KLMENAGKMEEYVEENGEEEDDQT--SSKPVANGN--ANNLKKDSSSKKKSKEGKSVLIK-QEE---RETGVVSWKVLER 906 (1622)
T ss_pred HHHHhccccccccccccccccccc--ccccccccc--cccccccccccccccccchhhhh-HHH---HhcCccCHHHHHH
Confidence 887643211100000000000000 000000000 00000000000000000000001 111 1123334555555
Q ss_pred hhhhhHHH-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 985 LQRPEFAM-I-IFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGWAG 1062 (1560)
Q Consensus 985 ~~~~~~~~-l-~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 1062 (1560)
|.+..... + ++.+++.++..+ +......++..|.+..... .....++.+++++++++..++.+++.++..+.+
T Consensus 907 Y~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~wl~~w~~~~~~~-~~~~~~~~~i~~~l~~~~~i~~~~~~~~~~~~~ 981 (1622)
T PLN03130 907 YKNALGGAWVVMILFLCYVLTEV----FRVSSSTWLSEWTDQGTPK-THGPLFYNLIYALLSFGQVLVTLLNSYWLIMSS 981 (1622)
T ss_pred HHHHhccHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHhccccC-CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55442221 1 111111111111 1112222333333321111 122334566677777888888888888889999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1063 TKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTLVA 1142 (1560)
Q Consensus 1063 ~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~lv~ 1142 (1560)
.++..++|..++++++++|+.||| ++++|+++|||++|++.++..++..+..++..++.+++.++++++++|...+
T Consensus 982 ~~~~~~L~~~l~~~ll~~p~~ffd--~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~i~~~~~~~~~-- 1057 (1622)
T PLN03130 982 LYAAKRLHDAMLGSILRAPMSFFH--TNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFVLIGIVSTISLW-- 1057 (1622)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhc--cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 999999999999999999999998 7999999999999999999999999999999988888888888887764332
Q ss_pred HHHHHHHHHHHHHHHHHhc----chhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHH---
Q 000406 1143 AALTPFTLGASYLSLIINV----GPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRS--- 1215 (1560)
Q Consensus 1143 l~~ipl~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~--- 1215 (1560)
+++|+.+++.++...+.. ..+......++..+++.|++.|+++||+|+.++.+.+.+.+..+...+..+...
T Consensus 1058 -~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 1136 (1622)
T PLN03130 1058 -AIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNNIRFTLVNMSSN 1136 (1622)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 233333322222222211 112223455678899999999999999999999988888877776655443322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-cc-----HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 000406 1216 QILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGH-AS-----FGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVL 1289 (1560)
Q Consensus 1216 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~-~s-----~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~ 1289 (1560)
+|.+....+ +..+++++.+...+..+. .. .+.+..++.+.......+..+...+...+..+.+++|+.
T Consensus 1137 ~wl~~~l~~------~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~~sveRi~ 1210 (1622)
T PLN03130 1137 RWLAIRLET------LGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVG 1210 (1622)
T ss_pred HHHHHHHHH------HHHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222222111 111222222333333321 11 122223333444555666777777888899999999999
Q ss_pred HHhccCCccccc---cccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhccc
Q 000406 1290 QITKRKPLIDNV---KGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFY 1366 (1560)
Q Consensus 1290 ~i~~~~~~~~~~---~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~ 1366 (1560)
++.+.+++.+.. ..+...|+..+.|+|+||+|+|+++ .++||+||||+|+|||+||||||||||||||+++|+|+|
T Consensus 1211 e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~ 1289 (1622)
T PLN03130 1211 TYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIV 1289 (1622)
T ss_pred HHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcC
Confidence 998876654321 1122235556789999999999643 347999999999999999999999999999999999999
Q ss_pred CCCccEEEECCEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccc
Q 000406 1367 DPNQGKVMIEGVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQV 1446 (1560)
Q Consensus 1367 ~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~V 1446 (1560)
+|++|+|+|||+|++++++++||++|++|||||+||+|||||||++++ +++|+|+++||+.++++++|.++|+||||+|
T Consensus 1290 ~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~tdeei~~Al~~a~l~~~I~~lp~GLdt~V 1368 (1622)
T PLN03130 1290 ELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHNDADLWESLERAHLKDVIRRNSLGLDAEV 1368 (1622)
T ss_pred CCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCCHHHHHHHHHHcCcHHHHHhCccccCccc
Confidence 999999999999999999999999999999999999999999999986 6799999999999999999999999999999
Q ss_pred cCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCC
Q 000406 1447 GESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDG 1526 (1560)
Q Consensus 1447 ge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G 1526 (1560)
||+|.+|||||||||||||||||+|+|||||||||+||.+||+.|+++|++.+++||+|+||||++|+++||||+||++|
T Consensus 1369 ge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrIlVLd~G 1448 (1622)
T PLN03130 1369 SEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILVLDAG 1448 (1622)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEEEEEECC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCHHHHHhhccChHHHHHHHHhhhh
Q 000406 1527 AVVEYGSHETLLASHLNGVYASLVRAETEA 1556 (1560)
Q Consensus 1527 ~IvE~Gt~~eLl~~~~~g~y~~l~~~q~~~ 1556 (1560)
+|+|+|+|+||++ +++|.|++|++.++..
T Consensus 1449 ~IvE~Gt~~eLl~-~~~g~f~~L~~~~~~~ 1477 (1622)
T PLN03130 1449 RVVEFDTPENLLS-NEGSAFSKMVQSTGAA 1477 (1622)
T ss_pred EEEEeCCHHHHHh-CCCCHHHHHHHHcChh
Confidence 9999999999998 3479999999887653
No 5
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.5e-148 Score=1533.94 Aligned_cols=1154 Identities=19% Similarity=0.252 Sum_probs=846.1
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 347 VLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLEITCWRLVGERSAQR 426 (1560)
Q Consensus 347 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~ 426 (1560)
+++++++.++..++....|++++.+++.+.... . . .... .+++++.+..++..++.....+....++.++...
T Consensus 303 ~~~~~~~~i~~~~~~~~~P~ll~~li~~~~~~~--~--~--~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~ 375 (1495)
T PLN03232 303 FWLGGIFKIGHDLSQFVGPVILSHLLQSMQEGD--P--A--WVGY-VYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRST 375 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--c--c--chHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444555556666666667778888888764321 1 0 0010 1111111111111111111112224567777778
Q ss_pred HHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H
Q 000406 427 IRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLRSWKVSLVVLSV---T 503 (1560)
Q Consensus 427 lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~s~~l~lv~l~~---~ 503 (1560)
++..+++++++++..+++.. ++|+++|++++|++.+++.+ ..+..++...+.++++++++ .+.++++.++. +
T Consensus 376 l~~~i~~k~l~l~~~~~~~~-~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l---~~~lg~~~l~~~~v~ 450 (1495)
T PLN03232 376 LVAAIFHKSLRLTHEARKNF-ASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLL---YQQLGVASLFGSLIL 450 (1495)
T ss_pred HHHHHHHHHhcCChhhcCCC-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---HHHHhHHHHHHHHHH
Confidence 88899999999999998655 89999999999999999975 33333333333333322221 22233322222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhHHHHHHHHHHHHH
Q 000406 504 PLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKLGFAKGAGMGVI 583 (1560)
Q Consensus 504 pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~ 583 (1560)
.+++.+..++.+...+..++.++..++..+.+.|.++|+++||+|+||+.+.+++.+.++++.+...+.....+....+.
T Consensus 451 ~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~ 530 (1495)
T PLN03232 451 FLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFIL 530 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333455667777888888888889999999999999999999999999999999999888877777766655443332
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCC
Q 000406 584 YLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIIDRVPEIDPYNSEG 663 (1560)
Q Consensus 584 ~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~~~~~~~~~~~~~ 663 (1560)
.... ..+.++++|++++.+|.+++|.+++++.++..+..++..++..+..+.++.++++|+.++++.+++.... .
T Consensus 531 ~~~~--~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~--~- 605 (1495)
T PLN03232 531 NSIP--VVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQ--N- 605 (1495)
T ss_pred HHHH--HHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccc--c-
Confidence 2222 1233467788888899999999999998888888899999999999999999999999999864432111 1
Q ss_pred CcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCcc
Q 000406 664 RKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQ 743 (1560)
Q Consensus 664 ~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~ 743 (1560)
....+..+.|+++|++|+|+.+++.++|+|+||+|++||+++||||||||||||+++|+|+++|++|.+.
T Consensus 606 ~~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~---------- 675 (1495)
T PLN03232 606 PPLQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV---------- 675 (1495)
T ss_pred CCcCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE----------
Confidence 1111223579999999999854446799999999999999999999999999999999999999998763
Q ss_pred HHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHH
Q 000406 744 VKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALA 823 (1560)
Q Consensus 744 ~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialA 823 (1560)
.+|++|+||+|+||||++||||||.||.+ .+++++.++++.++++++++.+|+|++|.+||+|.+|||||||||+||
T Consensus 676 --~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~-~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLA 752 (1495)
T PLN03232 676 --VIRGSVAYVPQVSWIFNATVRENILFGSD-FESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMA 752 (1495)
T ss_pred --EecCcEEEEcCccccccccHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHH
Confidence 24678999999999999999999999986 578889999999999999999999999999999999999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHH-HHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhhcch
Q 000406 824 RAMIKDPRILLLDEPTSALDSESESIVQ-QAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLERGGA 902 (1560)
Q Consensus 824 RAl~~~p~illLDEpts~LD~~~~~~i~-~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~~~~ 902 (1560)
||+|++|+||||||||||||+++++.+. ++++...+++|+|+||||++.+..||+|++|++|+|++.|++++++++++.
T Consensus 753 RAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~~~~ 832 (1495)
T PLN03232 753 RAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKSGSL 832 (1495)
T ss_pred HHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhcchh
Confidence 9999999999999999999999988765 557766789999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhhHhhhhCCCCchhhHHHH
Q 000406 903 YHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQTVEEEQQKPRPRKFQLSEI 982 (1560)
Q Consensus 903 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 982 (1560)
|.+++..+.......+.... . +... .......... ..... ..... .+...... ..+++. ..+.+.+..+
T Consensus 833 ~~~l~~~~~~~~~~~~~~~~-~-~~~~-~~~~~~~~~~-~~~~~--~~~~~-~~~~~~~~-~~~e~~---~~g~v~~~vy 901 (1495)
T PLN03232 833 FKKLMENAGKMDATQEVNTN-D-ENIL-KLGPTVTIDV-SERNL--GSTKQ-GKRGRSVL-VKQEER---ETGIISWNVL 901 (1495)
T ss_pred HHHHHHhccccccccccccc-c-cccc-cccccccccc-ccccc--ccccc-cccchhhh-hhHHHH---hcCcccHHHH
Confidence 88887654321110000000 0 0000 0000000000 00000 00000 00000000 011111 1233445566
Q ss_pred HHhhhhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 983 WKLQRPEFAMII-FGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGWA 1061 (1560)
Q Consensus 983 ~~~~~~~~~~l~-~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 1061 (1560)
++|.+...+... ..+++..+ +..++......++..|.+..... .....+|..++++++++..++.+++.++..+.
T Consensus 902 ~~y~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~wl~~w~~~~~~~-~~~~~~~l~~y~~l~~~~~~~~~~~~~~~~~~ 977 (1495)
T PLN03232 902 MRYNKAVGGLWVVMILLVCYL---TTEVLRVSSSTWLSIWTDQSTPK-SYSPGFYIVVYALLGFGQVAVTFTNSFWLISS 977 (1495)
T ss_pred HHHHHHcCcHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcccCCC-CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666655332111 11111111 11111111122333333221110 11234567777888888888888888889999
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1062 GTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTLV 1141 (1560)
Q Consensus 1062 ~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~lv 1141 (1560)
+.+++.++|++++++++++|+.||+ ++++|+++||+++|++.++..++..+..++..++.+++.+++++++++...+
T Consensus 978 ~~~~~~~lr~~l~~~ll~~p~~ff~--~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~- 1054 (1495)
T PLN03232 978 SLHAAKRLHDAMLNSILRAPMLFFH--TNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFALIGTVSTISLW- 1054 (1495)
T ss_pred HHHHHHHHHHHHHHHHHcCCeeeeC--cCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999998 7999999999999999999999999988888888888777777776653332
Q ss_pred HHHHHHHHHHHHHHHHHHh----cchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHH
Q 000406 1142 AAALTPFTLGASYLSLIIN----VGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQI 1217 (1560)
Q Consensus 1142 ~l~~ipl~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~ 1217 (1560)
+++|+.+++.++...+. ...+......++..+++.|++.|+++||+|+.++.+.+++.+..+...+..+.....
T Consensus 1055 --~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1132 (1495)
T PLN03232 1055 --AIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNNIRFTLANTSS 1132 (1495)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22333333222222211 112222445667889999999999999999999999888888777666554432221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcc----cHH-HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 000406 1218 LGLTLGFSQGAMYVAYTFTLWFGAYLVK-QGHA----SFG-VVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQI 1291 (1560)
Q Consensus 1218 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~-~g~~----s~g-~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i 1291 (1560)
..+ ..+. +..+..+++.+.+...+. .+.+ +++ .+..++.+......++..+...+.+.+.+..+++|+.++
T Consensus 1133 ~~w-l~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~eRi~e~ 1209 (1495)
T PLN03232 1133 NRW-LTIR--LETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSLNSVERVGNY 1209 (1495)
T ss_pred HHH-HHHH--HHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 1111 111112222222333333 2332 112 222234444455667788888899999999999999999
Q ss_pred hccCCccccc-c--ccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC
Q 000406 1292 TKRKPLIDNV-K--GRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP 1368 (1560)
Q Consensus 1292 ~~~~~~~~~~-~--~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p 1368 (1560)
.+.+++.+.. . .+...|+..+.|+|+||+|+|+++ .++||+||||+|+|||+||||||||||||||+++|+|+|+|
T Consensus 1210 ~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~p 1288 (1495)
T PLN03232 1210 IDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVEL 1288 (1495)
T ss_pred hcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCcC
Confidence 9876654321 1 112234555789999999999643 35799999999999999999999999999999999999999
Q ss_pred CccEEEECCEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccC
Q 000406 1369 NQGKVMIEGVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGE 1448 (1560)
Q Consensus 1369 ~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge 1448 (1560)
++|+|+|||+|++++++++||++|++|||||+||+|||||||++++ +++|+|+++|++.++++++|.++|+||||+|||
T Consensus 1289 ~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e 1367 (1495)
T PLN03232 1289 EKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWEALERAHIKDVIDRNPFGLDAEVSE 1367 (1495)
T ss_pred CCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHHHHHHcCCHHHHHhCcCCCCceecC
Confidence 9999999999999999999999999999999999999999999975 689999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEE
Q 000406 1449 SGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAV 1528 (1560)
Q Consensus 1449 ~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~I 1528 (1560)
+|.+|||||||||||||||+++|+|||||||||+||.+||+.|+++|++.+++||+|+||||++++++||||+||++|+|
T Consensus 1368 ~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVL~~G~i 1447 (1495)
T PLN03232 1368 GGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKILVLSSGQV 1447 (1495)
T ss_pred CCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCHHHHHhhccChHHHHHHHHhhhh
Q 000406 1529 VEYGSHETLLASHLNGVYASLVRAETEA 1556 (1560)
Q Consensus 1529 vE~Gt~~eLl~~~~~g~y~~l~~~q~~~ 1556 (1560)
+|+|+|+||++ +++|.|++|++.+...
T Consensus 1448 vE~Gt~~eLl~-~~~~~f~~l~~~~~~~ 1474 (1495)
T PLN03232 1448 LEYDSPQELLS-RDTSAFFRMVHSTGPA 1474 (1495)
T ss_pred EEECCHHHHHh-CCCCHHHHHHHHhChh
Confidence 99999999998 3467999999988654
No 6
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=7.3e-145 Score=1499.26 Aligned_cols=1169 Identities=20% Similarity=0.250 Sum_probs=861.8
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 347 VLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLEITCWRLVGERSAQR 426 (1560)
Q Consensus 347 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~ 426 (1560)
+++++++.++..++....|+++..+++.+.+... . ... ...+++.++++.++..++.....+....++.++...
T Consensus 319 ~l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~-~----~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~ 392 (1522)
T TIGR00957 319 FLMSFCFKAIHDLMMFIGPQILSLLIRFVNDPMA-P----DWQ-GYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTA 392 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-c----cch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555555556666788888886643211 0 000 111222222222222222222223345578888889
Q ss_pred HHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 427 IRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLRSWKVSLVVLSVTPLM 506 (1560)
Q Consensus 427 lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~s~~l~lv~l~~~pl~ 506 (1560)
++..+++|+++++...++.. ++|+++|+++.|++++.+... .+..+...++.+++++++++....+.+++.+++++++
T Consensus 393 L~~~iy~K~L~l~~~~~~~~-~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~ 470 (1522)
T TIGR00957 393 VMGAVYRKALVITNSARKSS-TVGEIVNLMSVDAQRFMDLAT-YINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLM 470 (1522)
T ss_pred HHHHHHHHHHhCChhhcCCC-CHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 99999999999999999655 899999999999999988553 2333333333333333332222222334444555566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhHHHHHHHHHHHHHHHH
Q 000406 507 MFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKLGFAKGAGMGVIYLV 586 (1560)
Q Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 586 (1560)
+.+..++.+...+..++..+..++..+.+.|.++||++||+|+||+.+.+++.+.++++.+...+..........+....
T Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~ 550 (1522)
T TIGR00957 471 VPLNAVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCT 550 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66667777788888888888889999999999999999999999999999999999888776666665554433222211
Q ss_pred HHHHHHHHHHHHHHHHh--cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCC
Q 000406 587 TYATWALAFWYGSILVA--RKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIIDRVPEIDPYNSEGR 664 (1560)
Q Consensus 587 ~~~~~~~~~~~g~~lv~--~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~~~~~~~~~~~~~~ 664 (1560)
..+ +..+.++.+++. .+.++++.+++++.++..+..|+..++..+..+.++.++++||.++++.+++. +......
T Consensus 551 ~~~--~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~-~~~~~~~ 627 (1522)
T TIGR00957 551 PFL--VALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELE-PDSIERR 627 (1522)
T ss_pred HHH--HHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccc-ccccccc
Confidence 111 112234455554 35688999999887777788899999999999999999999999999764331 1110111
Q ss_pred cCC-CCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCcc
Q 000406 665 KLS-SVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQ 743 (1560)
Q Consensus 665 ~~~-~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~ 743 (1560)
... ...+.|+++|++|+|+.. +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 628 ~~~~~~~~~i~~~~~~~~~~~~-~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g------- 699 (1522)
T TIGR00957 628 TIKPGEGNSITVHNATFTWARD-LPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKG------- 699 (1522)
T ss_pred ccCCCCCCcEEEEEeEEEcCCC-CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECC-------
Confidence 111 112479999999999743 34699999999999999999999999999999999999999999999997
Q ss_pred HHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHH
Q 000406 744 VKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALA 823 (1560)
Q Consensus 744 ~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialA 823 (1560)
+|+||+|+||+|++||+|||.+|.+. +.++..++++.+++.+++..+|.|++|.+|++|.+|||||||||+||
T Consensus 700 ------~i~yv~Q~~~l~~~Ti~eNI~~g~~~-~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLA 772 (1522)
T TIGR00957 700 ------SVAYVPQQAWIQNDSLRENILFGKAL-NEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLA 772 (1522)
T ss_pred ------EEEEEcCCccccCCcHHHHhhcCCcc-CHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHH
Confidence 59999999999999999999998753 45566677778888899999999999999999999999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHH---hcCCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhhc
Q 000406 824 RAMIKDPRILLLDEPTSALDSESESIVQQAIDK---ISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLERG 900 (1560)
Q Consensus 824 RAl~~~p~illLDEpts~LD~~~~~~i~~~l~~---~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~~ 900 (1560)
||++++|+|+|||||||+||+++++.+.+.+.+ +.+++|+|+|||+++.+..||+|++|++|++++.|+++++++++
T Consensus 773 RAl~~~~~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~~ 852 (1522)
T TIGR00957 773 RAVYSNADIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQRD 852 (1522)
T ss_pred HHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhcc
Confidence 999999999999999999999999999988853 45689999999999999999999999999999999999999888
Q ss_pred chHHHHHHHHHhhccCccccch------hccccc---ch--hh---hhhhHHH-hhhhhhhhhh-hh----hhhhhhhH-
Q 000406 901 GAYHDLVKLASEAVSQPQSKQK------DAKRGI---EF--SI---YEKSVIE-VSRSRYANEV-SK----SKYFKSMQ- 959 (1560)
Q Consensus 901 ~~~~~l~~~~~~~~~~~~~~~~------~~~~~~---~~--~~---~~~~~~~-~~~~~~~~~~-~~----~~~~~~~~- 959 (1560)
+.|.++................ ...... +. .. ....... .......... +. ........
T Consensus 853 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1522)
T TIGR00957 853 GAFAEFLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEA 932 (1522)
T ss_pred hhHHHHHHhhccccccccccccccccccccccccccccccccccccccchhhhhcccccccccccccccccccccccccc
Confidence 8888877543211100000000 000000 00 00 0000000 0000000000 00 00000000
Q ss_pred HHhhhhHhhhhCCCCchhhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccch-hhhhhHHHHHH
Q 000406 960 AEIQTVEEEQQKPRPRKFQLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTAS-TLRRDVRYLSL 1038 (1560)
Q Consensus 960 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~ 1038 (1560)
.+......++++...+.+.+..++.|.+......++.+++..+. ...+......++..|.+.... .......++..
T Consensus 933 ~~~~~~~~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~ 1009 (1522)
T TIGR00957 933 KEETWKLMEADKAQTGQVELSVYWDYMKAIGLFITFLSIFLFVC---NHVSALASNYWLSLWTDDPMVNGTQNNTSLRLS 1009 (1522)
T ss_pred ccchhhhHHHHHHhcCcccHHHHHHHHHHcCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHhccccccCCCCCcchHHH
Confidence 00000000011111223344555555554332222211111111 111111222233333332110 01111233445
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHH
Q 000406 1039 ALVGLGFGCIIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLL 1118 (1560)
Q Consensus 1039 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l 1118 (1560)
++++++++..++.++..++..+++.++..++|+.++++++++|+.||| ++++|+++|||++|++.++..++..+..++
T Consensus 1010 iy~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~--~~~~G~ilnR~s~Di~~id~~l~~~~~~~~ 1087 (1522)
T TIGR00957 1010 VYGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFE--RTPSGNLVNRFSKELDTVDSMIPPVIKMFM 1087 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhc--cCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677777777777777888888899999999999999999999999998 799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHH
Q 000406 1119 MGLSSAAVGLGVSLVLNWRLTLVAAALTPFTLGASYLS-LIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQII 1197 (1560)
Q Consensus 1119 ~~~~~~i~~l~~~~~~~~~l~lv~l~~ipl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~ 1197 (1560)
..++.+++.++++++.+|.++++++++++++++...+. ...+...+......++..+++.|++.|+++||+|++++.+.
T Consensus 1088 ~~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~ 1167 (1522)
T TIGR00957 1088 GSLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFI 1167 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHH
Confidence 99999998888888888876555444433332222211 11111122234456778899999999999999999999999
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcccHHHHHHHHHHHHHHHHHHHHHHhhHH
Q 000406 1198 NSFDKALSEPKKKSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAYLVK-QGHASFGVVYKIFLILVLSSFSVGQLAGLAP 1276 (1560)
Q Consensus 1198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~-~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~ 1276 (1560)
+++.+..+...+..+.......+.......+. .+++++++...+. .|.++.|.+.+++.+...+..++..+...+.
T Consensus 1168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~ 1244 (1522)
T TIGR00957 1168 HQSDLKVDENQKAYYPSIVANRWLAVRLECVG---NCIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSS 1244 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888876654444333333222222 2233344444443 5789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCccccc---cccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCC
Q 000406 1277 DTSMAATAIPAVLQITKRKPLIDNV---KGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGS 1353 (1560)
Q Consensus 1277 ~~~~~~~s~~ri~~i~~~~~~~~~~---~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGS 1353 (1560)
+++.++.+++|+.++.+.+++.+.. ......|+..+.|+|+||+|+|+++ .++||+||||+|+|||+|||||||||
T Consensus 1245 ~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGs 1323 (1522)
T TIGR00957 1245 EMETNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGA 1323 (1522)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCC
Confidence 9999999999999999776553311 1122235556789999999999754 24699999999999999999999999
Q ss_pred CHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHH
Q 000406 1354 GKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHK 1433 (1560)
Q Consensus 1354 GKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~ 1433 (1560)
|||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+||||+||++.. +++|+|+++|++.+++++
T Consensus 1324 GKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~l~~ 1402 (1522)
T TIGR00957 1324 GKSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAHLKT 1402 (1522)
T ss_pred CHHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcCcHH
Confidence 9999999999999999999999999999999999999999999999999999999999754 689999999999999999
Q ss_pred HHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHH
Q 000406 1434 FISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLST 1513 (1560)
Q Consensus 1434 ~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlst 1513 (1560)
+|.++|+||||+|||+|.+|||||||||||||||+++|+|||||||||+||.+||+.|+++|++.+++||+|+||||+++
T Consensus 1403 ~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~t 1482 (1522)
T TIGR00957 1403 FVSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNT 1482 (1522)
T ss_pred HHhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCEEEEEeCCEEEEecCHHHHHhhccChHHHHHHHHh
Q 000406 1514 IREANMIAVVRDGAVVEYGSHETLLASHLNGVYASLVRAE 1553 (1560)
Q Consensus 1514 i~~aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~~l~~~q 1553 (1560)
+.+||||+||++|+|+|+|+|+||++ ++|.|++|+++.
T Consensus 1483 i~~~DrIlVld~G~IvE~G~~~eLl~--~~~~f~~l~~~~ 1520 (1522)
T TIGR00957 1483 IMDYTRVIVLDKGEVAEFGAPSNLLQ--QRGIFYSMAKDA 1520 (1522)
T ss_pred HHhCCEEEEEECCEEEEECCHHHHHh--CCCHHHHHHHHc
Confidence 99999999999999999999999998 479999999874
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2e-139 Score=1439.91 Aligned_cols=1172 Identities=19% Similarity=0.205 Sum_probs=856.2
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 344 MILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLEITCWRLVGERS 423 (1560)
Q Consensus 344 ~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~ 423 (1560)
++.+++.+++.++..++....|++++.+++.+.... . . ......+++.+++..++..++.....+.....+.++
T Consensus 243 ~~~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~--~---~-~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~~ 316 (1560)
T PTZ00243 243 PYYVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADN--A---T-WGRGLGLVLTLFLTQLIQSVCLHRFYYISIRCGLQY 316 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--c---c-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445555666666666677778888887653211 1 0 111111122222222223333333334445566667
Q ss_pred HHHHHHHHHHHHHhcCchhhcc-CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 424 AQRIRTKYLRAVLRQDIAFFDT-EVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLRSWKVSLVVLSV 502 (1560)
Q Consensus 424 ~~~lr~~l~~~ll~~~l~ffd~-~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~s~~l~lv~l~~ 502 (1560)
...|...+|+|+++.+...+.. +.++|+++|+++.|++.+.+++.. +..++...+.++++++++..+..+.+++.+++
T Consensus 317 r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~-~~~l~~~Pl~li~~~~lL~~~lG~~al~gv~v 395 (1560)
T PTZ00243 317 RSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQY-CMYLWSSPMVLLLSILLLSRLVGWCALMAVAV 395 (1560)
T ss_pred HHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 7777778888888888766631 337899999999999999999844 44455556666665666665555667777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhHHHHHHHHHHHH
Q 000406 503 TPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKLGFAKGAGMGV 582 (1560)
Q Consensus 503 ~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 582 (1560)
+++++.+..++.+.....+++..+..++..+.+.|.++|||+||+++||+.|.+++.+.++++.+...+......+...+
T Consensus 396 l~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~El~~l~~~~~~~~~~~~~ 475 (1560)
T PTZ00243 396 LLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARELRYLRDVQLARVATSFV 475 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888888888888889999999999999999999999999999999999999999988877777776665554
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC----C
Q 000406 583 IYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIIDRVPEID----P 658 (1560)
Q Consensus 583 ~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~~~~~~~----~ 658 (1560)
......++.++ .++++.+.++.++++.+|+++.++..+..|+..++..+..+.++.+|++||.+|++.++... +
T Consensus 476 ~~~~p~l~~~~--~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~~fL~~~e~~~~~~~~ 553 (1560)
T PTZ00243 476 NNATPTLMIAV--VFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRISTFLECDNATCSTVQD 553 (1560)
T ss_pred HHHHHHHHHHH--HHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccccc
Confidence 44433333322 34667778899999999999999999999999999999999999999999999997543100 0
Q ss_pred C-C--------CC--C---------------Cc---------------------------CCCCcccEEEEEEEEEcCCC
Q 000406 659 Y-N--------SE--G---------------RK---------------------------LSSVSGKIEFKGVTFAYPSR 685 (1560)
Q Consensus 659 ~-~--------~~--~---------------~~---------------------------~~~~~g~i~~~~vs~~y~~~ 685 (1560)
. + .. . .. .......+.++|+++.++..
T Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (1560)
T PTZ00243 554 MEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPSPSVVVEDTDYGSPSS 633 (1560)
T ss_pred chhhcccccccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccc
Confidence 0 0 00 0 00 00012357778877765310
Q ss_pred -------------------------------------CCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCC
Q 000406 686 -------------------------------------PETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPT 728 (1560)
Q Consensus 686 -------------------------------------~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~ 728 (1560)
.+.++|+|+||+|++|++++|+||||||||||+++|+|+++|+
T Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~nGsGKSTLL~~i~G~~~~~ 713 (1560)
T PTZ00243 634 ASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGATGSGKSTLLQSLLSQFEIS 713 (1560)
T ss_pred cccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCCCCcHHHHHHHHhcCCCCC
Confidence 1245899999999999999999999999999999999999999
Q ss_pred ccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCC
Q 000406 729 KGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDR 808 (1560)
Q Consensus 729 ~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~ 808 (1560)
+|+|.++ ++|+||+|+|++|++||+|||.++.+. ..++..++++.++++++++.+|+|++|.+|++
T Consensus 714 ~G~i~~~-------------~~i~yv~Q~~~l~~~Tv~enI~~~~~~-~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~~~ 779 (1560)
T PTZ00243 714 EGRVWAE-------------RSIAYVPQQAWIMNATVRGNILFFDEE-DAARLADAVRVSQLEADLAQLGGGLETEIGEK 779 (1560)
T ss_pred CcEEEEC-------------CeEEEEeCCCccCCCcHHHHHHcCChh-hHHHHHHHHHHhhhHHHHHHhhccchHHhcCC
Confidence 9999874 469999999999999999999998653 34456667777888999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHH-HHHHhcCCcEEEEEecCccccccCCEEEEEeCCeE
Q 000406 809 GTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQ-AIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSV 887 (1560)
Q Consensus 809 g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~-~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~i 887 (1560)
|.+|||||||||+|||||+.+|+|||||||||+||+++++.+.+ ++....+|+|+|+|||+++.+..||+|++|++|++
T Consensus 780 g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~G~i 859 (1560)
T PTZ00243 780 GVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGDGRV 859 (1560)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEE
Confidence 99999999999999999999999999999999999998777654 45545568999999999999988999999999999
Q ss_pred EEecChhhHhhhcchHHHHHHHHHhhccCccccchhcccccchhhh--hhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhh
Q 000406 888 VEIGNHRQLLERGGAYHDLVKLASEAVSQPQSKQKDAKRGIEFSIY--EKSVIEVSRSRYANEVSKSKYFKSMQAEIQTV 965 (1560)
Q Consensus 888 v~~G~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 965 (1560)
++.|+++++++. +.|..+......................+.... .........+.................... .
T Consensus 860 ~~~G~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~ 937 (1560)
T PTZ00243 860 EFSGSSADFMRT-SLYATLAAELKENKDSKEGDADAEVAEVDAAPGGAVDHEPPVAKQEGNAEGGDGAALDAAAGRLM-T 937 (1560)
T ss_pred EEecCHHHHHhC-hHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccccccccccchhh-h
Confidence 999999999864 456665543211110000000000000000000 000000000000000000000000000000 0
Q ss_pred HhhhhCCCCchhhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHH
Q 000406 966 EEEQQKPRPRKFQLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGF 1045 (1560)
Q Consensus 966 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1045 (1560)
+++. ..+.+.+..++.|.+.........+++.++ ++..++......++..|.... .......++.+|+++.+
T Consensus 938 ~e~~---~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~--~~~~~~~~~~~~wl~~w~~~~---~~~~~~~~l~~y~~~~~ 1009 (1560)
T PTZ00243 938 REEK---ASGSVPWSTYVAYLRFCGGLHAAGFVLATF--AVTELVTVSSGVWLSMWSTRS---FKLSAATYLYVYLGIVL 1009 (1560)
T ss_pred HHHH---hcCcccHHHHHHHHHHhhhHHHHHHHHHHH--HHHHHHHHHHHHHHHHhcccc---cCCCcccHHHHHHHHHH
Confidence 1111 123344555555555432222111111110 011111111112222222211 11112234445555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1046 GCIIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAA 1125 (1560)
Q Consensus 1046 ~~~~~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i 1125 (1560)
+..++..++.+.....+.+...++|+.++++++++|+.||| ++++|+++|||++|++.++..++..+..++..++.++
T Consensus 1010 ~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd--~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i 1087 (1560)
T PTZ00243 1010 LGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFD--TTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSIC 1087 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhcc--CCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555555566667788899999999999999999998 7999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----hhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHH
Q 000406 1126 VGLGVSLVLNWRLTLVAAALTPFTLGASYLSLIINVG----PKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFD 1201 (1560)
Q Consensus 1126 ~~l~~~~~~~~~l~lv~l~~ipl~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~ 1201 (1560)
+.++++++.+|.+.+ +++|++++..++...+... .+......++..+++.|++.|+.+||+|+.++.+.++|.
T Consensus 1088 ~~li~~~~~~p~~~~---~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~ 1164 (1560)
T PTZ00243 1088 SSILVTSASQPFVLV---ALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEAL 1164 (1560)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHH
Confidence 888888888874433 3334333332322222222 122234567789999999999999999999999999999
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 000406 1202 KALSEPKKKSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAYL--VKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTS 1279 (1560)
Q Consensus 1202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l--v~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~ 1279 (1560)
+.++...+..+.......+......++..+..+++.+++... ...+.+++|.+..++.+...+..++..+...+.+++
T Consensus 1165 ~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le 1244 (1560)
T PTZ00243 1165 RRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVE 1244 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998887776555444444444444444333333444433 334557788877777888888889999999999999
Q ss_pred HHHHHHHHHHHHhccCCccccc--------------------------cc-cc---cCCCCCccEEEEEEEEEcCCCCCc
Q 000406 1280 MAATAIPAVLQITKRKPLIDNV--------------------------KG-RK---LERSKPLGIELKMVTFTYPSRPEV 1329 (1560)
Q Consensus 1280 ~~~~s~~ri~~i~~~~~~~~~~--------------------------~~-~~---~~~~~~~~I~~~nVsf~Y~~~~~~ 1329 (1560)
.++.+++|+.++.+..++++.. .. .. +.++..+.|+|+||+|+|+++ .+
T Consensus 1245 ~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~-~~ 1323 (1560)
T PTZ00243 1245 ADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG-LP 1323 (1560)
T ss_pred HHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-CC
Confidence 9999999999998643322100 00 00 112234679999999999754 35
Q ss_pred cceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceEEEcCCCCCCCccHHHH
Q 000406 1330 TVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEPALFAGTIRDN 1409 (1560)
Q Consensus 1330 ~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreN 1409 (1560)
+||+||||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+||||+|
T Consensus 1324 ~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreN 1403 (1560)
T PTZ00243 1324 LVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQN 1403 (1560)
T ss_pred ceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHH
Confidence 69999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccC-CCEEEEeCCCcCCCHHHH
Q 000406 1410 IALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKG-SRVLLLDEASSALDLESE 1488 (1560)
Q Consensus 1410 L~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~-p~ILILDEaTSaLD~~Te 1488 (1560)
|+++. +++|+||++||+.++++++|.++|+||||.|||+|.+||||||||||||||||++ |+|||||||||+||++||
T Consensus 1404 Idp~~-~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te 1482 (1560)
T PTZ00243 1404 VDPFL-EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALD 1482 (1560)
T ss_pred hCccc-CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHH
Confidence 99864 7899999999999999999999999999999999999999999999999999996 899999999999999999
Q ss_pred HHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHhhccChHHHHHHHHhhhh
Q 000406 1489 KHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLASHLNGVYASLVRAETEA 1556 (1560)
Q Consensus 1489 ~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~~l~~~q~~~ 1556 (1560)
+.|+++|++.+++||+|+||||++++.+||+|+||++|+|+|+|+|+||++ +++|.|++|++.++..
T Consensus 1483 ~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~-~~~~~f~~l~~~~~~~ 1549 (1560)
T PTZ00243 1483 RQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVM-NRQSIFHSMVEALGRS 1549 (1560)
T ss_pred HHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHh-CCCCHHHHHHHHhChh
Confidence 999999999999999999999999999999999999999999999999997 3589999999988643
No 8
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=3e-137 Score=1418.96 Aligned_cols=1157 Identities=17% Similarity=0.203 Sum_probs=836.0
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 354 ALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLEITCWRLVGERSAQRIRTKYLR 433 (1560)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lr~~l~~ 433 (1560)
.++..++....|+++..+++.+.... .. . ......+++.++++.++..++.....+....++.++...+...+++
T Consensus 89 ~~~~~~~~~~~P~ll~~li~~~~~~~-~~--~--~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy~ 163 (1490)
T TIGR01271 89 LYFGEATKAVQPLLLGRIIASYDPFN-AP--E--REIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIYK 163 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCC-CC--c--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445555668888888763211 00 0 0011112222223333333333333444455666666677777799
Q ss_pred HHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 434 AVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLRSWKVSLVVLSVTPLMMFCGMAY 513 (1560)
Q Consensus 434 ~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~s~~l~lv~l~~~pl~~~~~~~~ 513 (1560)
|+++++...++.. ++|+++|++++|++.|.+.+... ..+....+.+++++++++....+.+++.++++++++++..++
T Consensus 164 K~L~l~~~~~~~~-~~g~i~nl~s~Dv~~i~~~~~~~-~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~ 241 (1490)
T TIGR01271 164 KTLKLSSRVLDKI-STGQLVSLLSNNLNKFDEGLALA-HFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACL 241 (1490)
T ss_pred HHHhCCHHHhcCC-CHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988644 89999999999999999977643 233344444455555555555556677777788888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 514 KAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKLGFAKGAGMGVIYLVTYATWAL 593 (1560)
Q Consensus 514 ~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~ 593 (1560)
.+...+.+++.....+++.+.+.|.++||++||+|+||+.+.+++.+.++.+.+...+..........+..+... .+.
T Consensus 242 ~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~--~~~ 319 (1490)
T TIGR01271 242 GQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGF--FVV 319 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHH
Confidence 888889999999999999999999999999999999999999999999999888777777665444333332222 233
Q ss_pred HHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcCCCCccc
Q 000406 594 AFWYGSILVARKELSGGAAIACFFGVNVGGRGLA-LSLSYFAQFAQGTVAATRVFEIIDRVPEIDPYNSEGRKLSSVSGK 672 (1560)
Q Consensus 594 ~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~-~~~~~~~~~~~a~~a~~Ri~~~l~~~~~~~~~~~~~~~~~~~~g~ 672 (1560)
++.++.+.+.++ ++++.+|+++.++.....++. .++..+..+.++.++++||.+|+..++. ++.. . ......
T Consensus 320 ~~~f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~-~~~~---~--~~~~~~ 392 (1490)
T TIGR01271 320 FLSVVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEY-KTLE---Y--NLTTTE 392 (1490)
T ss_pred HHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-cccc---c--cCCCCc
Confidence 445566665544 678888988877777766764 5777889999999999999999975332 1111 0 112235
Q ss_pred EEEEEEEEEcCCCC-------------------------------CccccccceeEecCCCEEEEecCCCCChHHHHHHH
Q 000406 673 IEFKGVTFAYPSRP-------------------------------ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALI 721 (1560)
Q Consensus 673 i~~~~vs~~y~~~~-------------------------------~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll 721 (1560)
|+++|++|.|+... ..++|+|+||+|++|++++|+||||||||||+++|
T Consensus 393 i~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l 472 (1490)
T TIGR01271 393 VEMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMI 472 (1490)
T ss_pred eEEecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHH
Confidence 99999999995310 13589999999999999999999999999999999
Q ss_pred hcCCCCCccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCC
Q 000406 722 ERFYDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGY 801 (1560)
Q Consensus 722 ~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl 801 (1560)
+|+++|++|+|.++| +|+||+|+||+|++||+|||.||.+. ..++..++++.+++.+++..+|.|+
T Consensus 473 ~G~~~~~~G~i~~~g-------------~iayv~Q~~~l~~~Ti~eNI~~g~~~-~~~~~~~~~~~~~L~~~l~~l~~g~ 538 (1490)
T TIGR01271 473 MGELEPSEGKIKHSG-------------RISFSPQTSWIMPGTIKDNIIFGLSY-DEYRYTSVIKACQLEEDIALFPEKD 538 (1490)
T ss_pred hCCCCCCCceEEECC-------------EEEEEeCCCccCCccHHHHHHhcccc-chHHHHHHHHHHhHHHHHHhccccc
Confidence 999999999999998 49999999999999999999998653 3344555666778889999999999
Q ss_pred CcccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHH-HHHHhcCCcEEEEEecCccccccCCEEE
Q 000406 802 DTQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQ-AIDKISVGRTTIVIAHRLATVKNANTIV 880 (1560)
Q Consensus 802 ~t~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~-~l~~~~~~~tvi~itH~l~~i~~~D~i~ 880 (1560)
+|.+|++|.+|||||||||+||||++++|+|||||||||+||+++++.+.+ ++.++.+++|+|+|||+++.+..||+|+
T Consensus 539 ~t~vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii 618 (1490)
T TIGR01271 539 KTVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKIL 618 (1490)
T ss_pred cccccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEE
Confidence 999999999999999999999999999999999999999999999999987 5677777999999999999998899999
Q ss_pred EEeCCeEEEecChhhHhhhcchHHHHHHHHHhhc--------------------c--C-----ccccchh-cccccc--h
Q 000406 881 VLDQGSVVEIGNHRQLLERGGAYHDLVKLASEAV--------------------S--Q-----PQSKQKD-AKRGIE--F 930 (1560)
Q Consensus 881 vl~~G~iv~~G~~~~l~~~~~~~~~l~~~~~~~~--------------------~--~-----~~~~~~~-~~~~~~--~ 930 (1560)
+|++|++++.|+++++.+.++.|...+....... . . +...... ..+..+ .
T Consensus 619 ~l~~g~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 698 (1490)
T TIGR01271 619 LLHEGVCYFYGTFSELQAKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAE 698 (1490)
T ss_pred EEECCEEEEEcCHHHHHhcChHHHHHHhcccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999999876666655542100000 0 0 0000000 000000 0
Q ss_pred -----------------------------hhhhhhHHHhh----------------hhhhh------------hh-----
Q 000406 931 -----------------------------SIYEKSVIEVS----------------RSRYA------------NE----- 948 (1560)
Q Consensus 931 -----------------------------~~~~~~~~~~~----------------~~~~~------------~~----- 948 (1560)
...+....+.. ..... ..
T Consensus 699 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 778 (1490)
T TIGR01271 699 KRKQSIILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQL 778 (1490)
T ss_pred cccccccccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhc
Confidence 00000000000 00000 00
Q ss_pred -hhh------h-h---hh-------------hh------h-H------------HHh-hhhHhhhhCCCCchhhHHHHHH
Q 000406 949 -VSK------S-K---YF-------------KS------M-Q------------AEI-QTVEEEQQKPRPRKFQLSEIWK 984 (1560)
Q Consensus 949 -~~~------~-~---~~-------------~~------~-~------------~~~-~~~~~~~~~~~~~~~~~~~l~~ 984 (1560)
... . . .. .. . . ++. ...-.++++...+.+.++.+++
T Consensus 779 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~ 858 (1490)
T TIGR01271 779 MTHSNRGENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLR 858 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHH
Confidence 000 0 0 00 00 0 0 000 0000001111223345556666
Q ss_pred hhhhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc------c-h-h-----------hhhhHHHHHHHHHHHH
Q 000406 985 LQRPEFAMII-FGFILGMHAGAILSIFPLILGQALQVYFDDT------A-S-T-----------LRRDVRYLSLALVGLG 1044 (1560)
Q Consensus 985 ~~~~~~~~l~-~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~------~-~-~-----------~~~~~~~~~~~~~~l~ 1044 (1560)
|.+...+... +.+++.++.. .+...+...|+..|+... . . . .....+++..++++++
T Consensus 859 Y~~~~g~~~~~~~~~~~~~~~---~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1490)
T TIGR01271 859 YITTNRNLVFVLIFCLVIFLA---EVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTA 935 (1490)
T ss_pred HHHhcCcHHHHHHHHHHHHHH---HHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHH
Confidence 6654322111 1111111111 111111122222232210 0 0 0 0011122234444555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1045 FGCIIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSA 1124 (1560)
Q Consensus 1045 ~~~~~~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~ 1124 (1560)
++..++.+++.++....+.++..++|..++++++++|+.||+ ++++|+++|||++|++.++..++..+..++..++.+
T Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~--~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~ 1013 (1490)
T TIGR01271 936 DSVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLN--TMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIV 1013 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhC--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566677778888899999999999999999999999997 799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHH
Q 000406 1125 AVGLGVSLVLNWRLTLVAAALTPFTLGASYLSLIIN----VGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSF 1200 (1560)
Q Consensus 1125 i~~l~~~~~~~~~l~lv~l~~ipl~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~ 1200 (1560)
++.++++++++|.+++++ +|+++++.++...+. ...+......++..+++.|++.|+.+||+|++++.+.+++
T Consensus 1014 i~~l~~i~~~~p~l~l~~---~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~ 1090 (1490)
T TIGR01271 1014 LGAIFVVSVLQPYIFIAA---IPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLF 1090 (1490)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHH
Confidence 999998888888765543 333332222222221 1122234456778999999999999999999999999999
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 000406 1201 DKALSEPKKKSVKRSQILGLTLGFSQGAMYVAYT--FTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDT 1278 (1560)
Q Consensus 1201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~ 1278 (1560)
.+..+...+..+.......+......++..+..+ +.++++.. .++.|.+..++.+...+..++..+...+.++
T Consensus 1091 ~~~~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~~-----~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~l 1165 (1490)
T TIGR01271 1091 HKALNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGTN-----QDGEGEVGIILTLAMNILSTLQWAVNSSIDV 1165 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999876655443333222222222221111111 11222222 2333444444455555666777888888899
Q ss_pred HHHHHHHHHHHHHhccCCccccc-c----------------ccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeC
Q 000406 1279 SMAATAIPAVLQITKRKPLIDNV-K----------------GRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKG 1341 (1560)
Q Consensus 1279 ~~~~~s~~ri~~i~~~~~~~~~~-~----------------~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~ 1341 (1560)
+..+.+++|+.++.+.+++.... . ..+..|+..+.|+|+||+|+|++. .++||+||||+|+|
T Consensus 1166 e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~ 1244 (1490)
T TIGR01271 1166 DGLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEG 1244 (1490)
T ss_pred HHHHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcC
Confidence 99999999999998766553211 0 011235556789999999999753 46799999999999
Q ss_pred CcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHH
Q 000406 1342 GSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAE 1421 (1560)
Q Consensus 1342 GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~e 1421 (1560)
||+||||||||||||||+++|+|+++ .+|+|+|||+|+++++++.+|++|++|||||+||+||||+||+++. ..+|++
T Consensus 1245 GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tdee 1322 (1490)
T TIGR01271 1245 GQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDEE 1322 (1490)
T ss_pred CCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHHH
Confidence 99999999999999999999999997 7999999999999999999999999999999999999999999864 679999
Q ss_pred HHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCC
Q 000406 1422 IEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKR 1501 (1560)
Q Consensus 1422 I~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~ 1501 (1560)
+|+||+.++++++|.++|+||||+|+|+|.+||||||||||||||||++|+|||||||||+||.+||+.|++.|++.+++
T Consensus 1323 i~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~ 1402 (1490)
T TIGR01271 1323 IWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSN 1402 (1490)
T ss_pred HHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHhhccChHHHHHHHHhhhhcc
Q 000406 1502 ATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLASHLNGVYASLVRAETEANA 1558 (1560)
Q Consensus 1502 ~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~~l~~~q~~~~~ 1558 (1560)
||||+||||++++.+||||+||++|+|+|+|+|++|++ +++.|++|++++.+.+.
T Consensus 1403 ~TvI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~--~~~~f~~l~~~~~~~~~ 1457 (1490)
T TIGR01271 1403 CTVILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLN--ETSLFKQAMSAADRLKL 1457 (1490)
T ss_pred CEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHc--CCcHHHHHHHHhChhcc
Confidence 99999999999999999999999999999999999997 58999999998876554
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.1e-101 Score=936.43 Aligned_cols=573 Identities=38% Similarity=0.576 Sum_probs=533.2
Q ss_pred hhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 977 FQLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQG 1056 (1560)
Q Consensus 977 ~~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 1056 (1560)
..+++++.+.++.++++..++++.++......+.|.+++.+++.+...... .....-....+.++.++..++..++.+
T Consensus 133 ~~~~rl~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~--~~~~~~~~~~l~~l~~~~a~~~~~r~~ 210 (716)
T KOG0058|consen 133 TLLKRLLGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDS--ADALKRACTILLGLFLIGALANAIRGG 210 (716)
T ss_pred hHHHHHHHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccch--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356789999999999999999999998888899999999999988762111 223334556667777788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1057 FCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNW 1136 (1560)
Q Consensus 1057 ~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~ 1136 (1560)
.+.++++++..++|..+|++++++.++||| ++.+|++++|++.|+..+.+.++..+...+.+++..++++++|++++|
T Consensus 211 ~~~~a~~rv~~rlR~~lF~sil~QdiaFFD--~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~ 288 (716)
T KOG0058|consen 211 LLQYAGERVVARLRTDLFRSLLRQDIAFFD--ENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSW 288 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhc--cCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhH
Confidence 999999999999999999999999999999 689999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-chhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHH
Q 000406 1137 RLTLVAAALTPFTLGASYLSLIINV-GPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRS 1215 (1560)
Q Consensus 1137 ~l~lv~l~~ipl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~ 1215 (1560)
.|+++.++.+|+++++..++..+.+ ..+..+.+.++++....|.+.+++|+|+|++|+...++|.+.+++..+...+..
T Consensus 289 ~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a 368 (716)
T KOG0058|consen 289 RLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEA 368 (716)
T ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999988877665555444 444448889999999999999999999999999999999999999999999989
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccC
Q 000406 1216 QILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRK 1295 (1560)
Q Consensus 1216 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~ 1295 (1560)
...+.++....+..++..+.++++|++++..|+++.|.+..++++......++..+..++.+..++..+.+|++++++++
T Consensus 369 ~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~ 448 (716)
T KOG0058|consen 369 VAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRK 448 (716)
T ss_pred HHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEE
Q 000406 1296 PLIDNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMI 1375 (1560)
Q Consensus 1296 ~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~I 1375 (1560)
|..+.. +...+..-.+.|+|+||+|+||.+|+.+||+|+||+|+|||+||+||||||||||++++|.|||+|++|+|++
T Consensus 449 P~i~~~-G~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~Ill 527 (716)
T KOG0058|consen 449 PRIPLT-GTLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILL 527 (716)
T ss_pred CCCCCC-CccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 987665 4333323467899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCCh
Q 000406 1376 EGVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSG 1455 (1560)
Q Consensus 1376 dGvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSG 1455 (1560)
||+||++++.++||++||+|.|||.||+|||+|||.||.+.+++|||.+|++.|++|+||.++|+||||.|||+|.+|||
T Consensus 528 DG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSG 607 (716)
T KOG0058|consen 528 DGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSG 607 (716)
T ss_pred CCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHH
Q 000406 1456 GQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHE 1535 (1560)
Q Consensus 1456 GQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~ 1535 (1560)
||||||||||||+|||+|||||||||+||+++|..||++|.+..+++|||+|||||+||+.||+|+|+++|+|+|.|+|+
T Consensus 608 GQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~ 687 (716)
T KOG0058|consen 608 GQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHD 687 (716)
T ss_pred hHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccChHHHHHHHHhhh
Q 000406 1536 TLLASHLNGVYASLVRAETE 1555 (1560)
Q Consensus 1536 eLl~~~~~g~y~~l~~~q~~ 1555 (1560)
||++ +.+|.|++|+++|..
T Consensus 688 eLl~-~~~gly~~Lv~~q~~ 706 (716)
T KOG0058|consen 688 ELLS-KPNGLYAKLVQRQLD 706 (716)
T ss_pred HHhh-CcccHHHHHHHHhcc
Confidence 9999 467999999999854
No 10
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.9e-98 Score=908.37 Aligned_cols=572 Identities=38% Similarity=0.608 Sum_probs=537.2
Q ss_pred cHHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000406 331 GLFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAY 410 (1560)
Q Consensus 331 ~~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 410 (1560)
..++++.|..+ .|+++..++++.++......+.|+++|+++|.+.... + ....+...+.++.++.++..++.+
T Consensus 134 ~~~rl~~l~~~-~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~---~---~~~~~~~~~~~l~~l~~~~a~~~~ 206 (716)
T KOG0058|consen 134 LLKRLLGLLKP-EWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGD---D---SADALKRACTILLGLFLIGALANA 206 (716)
T ss_pred HHHHHHHHhch-hHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhcc---c---hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56789998765 5666777888888888888888999999999987611 1 123444567778888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 411 LEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFL 490 (1560)
Q Consensus 411 l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~ 490 (1560)
++.+|+.+.++++..+||.++|++++++++.|||.+ .+|++++|++.|++.+.+.++..+...+.+++..++++++|++
T Consensus 207 ~r~~~~~~a~~rv~~rlR~~lF~sil~QdiaFFD~n-ktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~ 285 (716)
T KOG0058|consen 207 IRGGLLQYAGERVVARLRTDLFRSLLRQDIAFFDEN-KTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFS 285 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC-CccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhh
Confidence 999999999999999999999999999999999977 8999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHh
Q 000406 491 RSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGA 570 (1560)
Q Consensus 491 ~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~ 570 (1560)
+||.|+++.++.+|+++++.++|.+..+++.++.+...++++....|.+.+|||||+|+.|+.+.+||.+..++..+...
T Consensus 286 ~S~~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~ 365 (716)
T KOG0058|consen 286 LSWRLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSK 365 (716)
T ss_pred hhHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 571 KLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEII 650 (1560)
Q Consensus 571 k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l 650 (1560)
|.+...+...+...++.++....++|+|++++..|.++.|.+.+++++......++..+...+..++++.+|.+|+++++
T Consensus 366 k~a~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~ 445 (716)
T KOG0058|consen 366 KEAVAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELM 445 (716)
T ss_pred HHHHHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCcCC-CCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCc
Q 000406 651 DRVPEIDPYNSEGRKLS-SVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTK 729 (1560)
Q Consensus 651 ~~~~~~~~~~~~~~~~~-~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~ 729 (1560)
|++|..++. +...| ...|.|+|+||+|+||.+++.+||+|+||+|+|||+|||||||||||||++++|.++|+|++
T Consensus 446 dr~P~i~~~---G~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pts 522 (716)
T KOG0058|consen 446 DRKPRIPLT---GTLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTS 522 (716)
T ss_pred ccCCCCCCC---CccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCC
Confidence 999987653 32222 57899999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCC
Q 000406 730 GLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRG 809 (1560)
Q Consensus 730 G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g 809 (1560)
|+|++||+||+++++.++|++||+|.|||.||++||+|||.||.++.+++++..|++++++|+||..+|+||+|.+||+|
T Consensus 523 G~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG 602 (716)
T KOG0058|consen 523 GRILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKG 602 (716)
T ss_pred CeEEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEE
Q 000406 810 TQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVE 889 (1560)
Q Consensus 810 ~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~ 889 (1560)
.+|||||||||||||||++||.||||||+|||||+++|..|+++|.+..+++|||+|+|||+++++||+|+|+++|+|+|
T Consensus 603 ~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E 682 (716)
T KOG0058|consen 603 SQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVE 682 (716)
T ss_pred ccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChhhHhhhc-chHHHHHHHHHhh
Q 000406 890 IGNHRQLLERG-GAYHDLVKLASEA 913 (1560)
Q Consensus 890 ~G~~~~l~~~~-~~~~~l~~~~~~~ 913 (1560)
.|+|+||+++. |.|+++++.+...
T Consensus 683 ~G~h~eLl~~~~gly~~Lv~~q~~~ 707 (716)
T KOG0058|consen 683 MGTHDELLSKPNGLYAKLVQRQLDS 707 (716)
T ss_pred cccHHHHhhCcccHHHHHHHHhccc
Confidence 99999999976 8999999876543
No 11
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4.2e-96 Score=932.61 Aligned_cols=578 Identities=40% Similarity=0.721 Sum_probs=548.7
Q ss_pred CcccHHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHH
Q 000406 328 KPVGLFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMM 407 (1560)
Q Consensus 328 ~~~~~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 407 (1560)
.+.++++++++.++ .|+.++++++++++.|+..|+++++++++++.+..... ..+......|++++++++++.++
T Consensus 648 ~~~s~~~i~k~~~p-e~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~----~~~~~~~~~~al~f~~l~~~~~i 722 (1228)
T KOG0055|consen 648 EKVSFWRIFKLNKP-EWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDD----DELKREVRAWALIFLGLGIVSGI 722 (1228)
T ss_pred ccccHHHHHHhccc-hhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCh----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 67889999998876 88899999999999999999999999999999874331 23334444599999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 408 GAYLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTV 487 (1560)
Q Consensus 408 ~~~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii 487 (1560)
+.+++.+++.+.++++..++|..+|++++++++.|||...++|.+.+|+++|...++..+...+..+++++..+++++++
T Consensus 723 ~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~nsg~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iii 802 (1228)
T KOG0055|consen 723 TNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENSGALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIII 802 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccchHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999996554599999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhH
Q 000406 488 GFLRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIP 567 (1560)
Q Consensus 488 ~~~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~ 567 (1560)
+|+++|+++++++++.|++++....+.+.+.....+......+...++.|+++|||||++|+.|+++.+.|.+.++...+
T Consensus 803 af~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~ 882 (1228)
T KOG0055|consen 803 AFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRK 882 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 568 FGAKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVF 647 (1560)
Q Consensus 568 ~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~ 647 (1560)
...+.+.+.++..++.+.+.++.+++.+|+|.+++.+|.+++..++.+++.+......++...++++++.++..|+.+++
T Consensus 883 ~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF 962 (1228)
T KOG0055|consen 883 SSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIF 962 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888888899999999999999999999999
Q ss_pred HHHccCCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC
Q 000406 648 EIIDRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP 727 (1560)
Q Consensus 648 ~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~ 727 (1560)
++++++|+++++++.+...++.+|+|+++||+|+||++|+.+||+|+||+|++||++||||||||||||++.+|.|+|+|
T Consensus 963 ~i~dr~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp 1042 (1228)
T KOG0055|consen 963 EILDRKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDP 1042 (1228)
T ss_pred HHhcCCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCC
Confidence 99999887776554444456678999999999999999999999999999999999999999999999999999999999
Q ss_pred CccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCC
Q 000406 728 TKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGD 807 (1560)
Q Consensus 728 ~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~ 807 (1560)
++|.|.|||.|++++++++||++||.|.|||.||++||||||+||.+..+.+|+.+||+.+++|+||.+||+||||.+||
T Consensus 1043 ~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGe 1122 (1228)
T KOG0055|consen 1043 DAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGE 1122 (1228)
T ss_pred CCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCc
Confidence 99999999999999999999999999999999999999999999965689999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeE
Q 000406 808 RGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSV 887 (1560)
Q Consensus 808 ~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~i 887 (1560)
+|.+||||||||||||||++|||+||||||+|||||.++|+.||++|++...|||+|+|+|||+++++||.|+|+++|+|
T Consensus 1123 rG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~V 1202 (1228)
T KOG0055|consen 1123 RGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGKV 1202 (1228)
T ss_pred ccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecChhhHhhhcchHHHHHHHH
Q 000406 888 VEIGNHRQLLERGGAYHDLVKLA 910 (1560)
Q Consensus 888 v~~G~~~~l~~~~~~~~~l~~~~ 910 (1560)
+|+|+|++|++++|.|.+|++.+
T Consensus 1203 vE~GtH~~L~~~~G~Y~~Lv~~q 1225 (1228)
T KOG0055|consen 1203 VEQGTHDELLAKRGIYFRLVQLQ 1225 (1228)
T ss_pred EecccHHHHHhCCCchHHHhhhc
Confidence 99999999999999999998765
No 12
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=5.2e-90 Score=872.77 Aligned_cols=567 Identities=31% Similarity=0.463 Sum_probs=518.5
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 978 QLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGF 1057 (1560)
Q Consensus 978 ~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 1057 (1560)
.+.+++....+++..+...++.+++...+..+.|++...+++...-. ........+.+.++.+.+...++.+++.++
T Consensus 141 ~~~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~---~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~ 217 (709)
T COG2274 141 GLSWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPD---ASRSTLTVLAIGLLLAALFEALLRLLRTYL 217 (709)
T ss_pred chHhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc---CchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566677777777777777777777777777888777777765532 223345566677777788888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1058 CGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWR 1137 (1560)
Q Consensus 1058 ~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~ 1137 (1560)
....+.++...+-..+|+|++++|+.||. ++++|++++|+. |.+.++++++..+...+.+++++++.++++++++|.
T Consensus 218 ~~~~~~rld~~l~~~~~~hll~Lpl~~f~--~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~ 294 (709)
T COG2274 218 IAHLGKRLDLELSGRFFRHLLRLPLSYFE--KRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWK 294 (709)
T ss_pred HHHHHHHHhHHHHHHHHHHHHcCcHHHcc--CCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999986 799999999996 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHH
Q 000406 1138 LTLVAAALTPFTLGASYLSL-IINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQ 1216 (1560)
Q Consensus 1138 l~lv~l~~ipl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~ 1216 (1560)
+++++++.+|++++..++.. ..++..++.....++.++.+.|++.|++|||+.+.|.++..+|++.+.++.+..++..+
T Consensus 295 L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~ 374 (709)
T COG2274 295 LTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEK 374 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHH
Confidence 99999999998887765544 44444444466778889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCC
Q 000406 1217 ILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKP 1296 (1560)
Q Consensus 1217 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~ 1296 (1560)
.......+..++..+..++++|+|+++|..|.+|+|.++++.++...+..|+..+++++.++.....+.+|+.++++.++
T Consensus 375 ~~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~ 454 (709)
T COG2274 375 LALILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPP 454 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred ccccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEEC
Q 000406 1297 LIDNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIE 1376 (1560)
Q Consensus 1297 ~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~Id 1376 (1560)
|.+........+...++|+|+||+|+|+.+ ++++|+|+||+|+|||+|||||+||||||||+|+|+|+|+|++|+|++|
T Consensus 455 E~~~~~~~~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~d 533 (709)
T COG2274 455 EQEGDKTLIHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLD 533 (709)
T ss_pred ccccccccccccccCceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEC
Confidence 765544333344457889999999999765 3579999999999999999999999999999999999999999999999
Q ss_pred CEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChH
Q 000406 1377 GVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGG 1456 (1560)
Q Consensus 1377 Gvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGG 1456 (1560)
|+|+++++++.||++|+|||||++||+|||||||++++|++++||+++||+.+++++||.++|.||||+|||+|.+||||
T Consensus 534 g~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGG 613 (709)
T COG2274 534 GVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGG 613 (709)
T ss_pred CEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHH
Q 000406 1457 QKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHET 1536 (1560)
Q Consensus 1457 QrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~e 1536 (1560)
|||||+|||||++||+||||||||||||++||+.|.+.|.+...+||+|+||||+++++.||||+|||+|+|+|.|+|+|
T Consensus 614 QrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~e 693 (709)
T COG2274 614 QRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEE 693 (709)
T ss_pred HHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccChHHHHHHHHh
Q 000406 1537 LLASHLNGVYASLVRAE 1553 (1560)
Q Consensus 1537 Ll~~~~~g~y~~l~~~q 1553 (1560)
|++ .+|.|++++++|
T Consensus 694 ll~--~~g~y~~l~~~q 708 (709)
T COG2274 694 LLA--QGGLYARLYQQQ 708 (709)
T ss_pred HHH--hcChHHHHHhcc
Confidence 998 589999999887
No 13
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.4e-84 Score=821.25 Aligned_cols=569 Identities=33% Similarity=0.502 Sum_probs=518.6
Q ss_pred cccHHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHH
Q 000406 329 PVGLFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMG 408 (1560)
Q Consensus 329 ~~~~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 408 (1560)
+.++..++....++ +..++-.++.+++.+++....|++...++|.+..... ...+....+.++++++...++
T Consensus 139 ~~~~~~f~~~~~~~-~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~-------~~tL~vl~ig~~~~~l~~~~l 210 (709)
T COG2274 139 PFGLSWFIPLLFKY-RRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDAS-------RSTLTVLAIGLLLAALFEALL 210 (709)
T ss_pred ccchHhHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc-------hhHHHHHHHHHHHHHHHHHHH
Confidence 33445555555443 3344455556666666677777789999998875432 233445566677777888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 409 AYLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVG 488 (1560)
Q Consensus 409 ~~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~ 488 (1560)
.+++.+...+++.+...++-.++++|++++|+.||+++ ++|++++|+ +|+++|++++...+...+.+++++++.++++
T Consensus 211 ~~lr~~~~~~~~~rld~~l~~~~~~hll~Lpl~~f~~r-~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm 288 (709)
T COG2274 211 RLLRTYLIAHLGKRLDLELSGRFFRHLLRLPLSYFEKR-SVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVM 288 (709)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHcCcHHHccCC-ChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999766 899999999 6899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHH
Q 000406 489 FLRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPF 568 (1560)
Q Consensus 489 ~~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~ 568 (1560)
++++|.|++++++.+|+++++..++.+..++..++.....++..+...|+++|++|||+.+.|..+..+|++...+..+.
T Consensus 289 ~~ys~~L~li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~ 368 (709)
T COG2274 289 FLYSWKLTLIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNI 368 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 569 GAKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFE 648 (1560)
Q Consensus 569 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~ 648 (1560)
+.+..........+..++..+..++++|+|+++|.+|.+|.|.++++.+....+..|+..+...+.++++...+.+|+.+
T Consensus 369 ~~~~~~~~~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~d 448 (709)
T COG2274 369 GFKTEKLALILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGD 448 (709)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHccCCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCC
Q 000406 649 IIDRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPT 728 (1560)
Q Consensus 649 ~l~~~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~ 728 (1560)
+++.++|.+... .....++..|+|+|+||+|+|+.++ +++|+|+||+|+|||++||||+||||||||+|+|.|+|+|+
T Consensus 449 il~~~~E~~~~~-~~~~~~~~~g~I~~~nvsf~y~~~~-~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~ 526 (709)
T COG2274 449 ILDTPPEQEGDK-TLIHLPKLQGEIEFENVSFRYGPDD-PPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ 526 (709)
T ss_pred HhcCCccccccc-ccccccccCceEEEEEEEEEeCCCC-cchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC
Confidence 999877643321 1223455689999999999998653 47999999999999999999999999999999999999999
Q ss_pred ccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCC
Q 000406 729 KGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDR 808 (1560)
Q Consensus 729 ~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~ 808 (1560)
+|+|++||.|++++++..+|++||||+||+.||+|||+|||+++.|+.+++++++||+.+++++||.++|.||+|.+||+
T Consensus 527 ~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~ 606 (709)
T COG2274 527 QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEG 606 (709)
T ss_pred CceEEECCEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEE
Q 000406 809 GTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVV 888 (1560)
Q Consensus 809 g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv 888 (1560)
|.+|||||||||+|||||+++|+||||||||||||+++|+.|.+.|.+...|+|+|+||||++++++||||+||++|+|+
T Consensus 607 G~~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv 686 (709)
T COG2274 607 GANLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIV 686 (709)
T ss_pred CCCCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecChhhHhhhcchHHHHHHH
Q 000406 889 EIGNHRQLLERGGAYHDLVKL 909 (1560)
Q Consensus 889 ~~G~~~~l~~~~~~~~~l~~~ 909 (1560)
++|+|+|+++.+|.|+.++..
T Consensus 687 ~~gs~~ell~~~g~y~~l~~~ 707 (709)
T COG2274 687 EQGSHEELLAQGGLYARLYQQ 707 (709)
T ss_pred ccCCHHHHHHhcChHHHHHhc
Confidence 999999999999999998864
No 14
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=9.5e-83 Score=814.46 Aligned_cols=559 Identities=33% Similarity=0.516 Sum_probs=489.7
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 982 IWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGWA 1061 (1560)
Q Consensus 982 l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 1061 (1560)
++.+.+ .+ .+.++.++.++...+....|.+++..++... ........+...++++.++..++.++..++..+.
T Consensus 7 l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~-----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 79 (567)
T COG1132 7 LLKYLK-YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALL-----ADLGELLELLLLLLLLALLGGVLRALQSYLGSRL 79 (567)
T ss_pred HHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444 44 5566666666666777777788777777665 1112233344444555556667777777788888
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1062 GTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTLV 1141 (1560)
Q Consensus 1062 ~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~lv 1141 (1560)
+.+...++|..+++++++.|+.||+ ++++|++++|+++|++.++..+......+...++..+..+++++.++|.++++
T Consensus 80 ~~~~~~~lr~~~~~~l~~~~~~~~~--~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ 157 (567)
T COG1132 80 GQKIVADLRRDLFEKLLRLPLSFFD--KAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALI 157 (567)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHhC--cCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 8999999999999999999999988 68899999999999999999999986666667888888899999999999999
Q ss_pred HHHHHHHHHHHHHHHH-HHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 000406 1142 AAALTPFTLGASYLSL-IINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILGL 1220 (1560)
Q Consensus 1142 ~l~~ipl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1220 (1560)
+++..|++.+...+.. +.....+..+....+..+.+.|++.|+++||+|+.++...+++.+..++..+...+...+.+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (567)
T COG1132 158 LLLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEAL 237 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988887776554433 343333444667788899999999999999999999999999999999998888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCcccc
Q 000406 1221 TLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLIDN 1300 (1560)
Q Consensus 1221 ~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~~~ 1300 (1560)
..++...+..+..++++++|..++..+.+++|.+.+++.+......++..+......+..+..+.+|+.++++.+++..+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 317 (567)
T COG1132 238 LAPLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVED 317 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC
Confidence 88888999999999999999999999999999999999999999999999999999999999999999999998665332
Q ss_pred ccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEec
Q 000406 1301 VKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDL 1380 (1560)
Q Consensus 1301 ~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi 1380 (1560)
.... .....+.|+|+||+|+|++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+|||+||
T Consensus 318 ~~~~--~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI 393 (567)
T COG1132 318 PPDP--LKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDI 393 (567)
T ss_pred CCCC--CCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEeh
Confidence 2211 1223467999999999974 34699999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000406 1381 REINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQR 1460 (1560)
Q Consensus 1381 ~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQR 1460 (1560)
+++++++||++|++|||||+||+|||+|||++|+|++++||+++|++.++++|||.++|+||||+|||+|.+||||||||
T Consensus 394 ~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQr 473 (567)
T COG1132 394 RDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQR 473 (567)
T ss_pred hhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000406 1461 IAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLAS 1540 (1560)
Q Consensus 1461 LaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~~ 1540 (1560)
||||||++++|||||||||||+||++||+.|+++|++..+++|+|+||||++++++||+|+|||+|+|+|+|+|+||++
T Consensus 474 laiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~- 552 (567)
T COG1132 474 LAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLA- 552 (567)
T ss_pred HHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHH-
Confidence 9999999999999999999999999999999999998888899999999999999999999999999999999999998
Q ss_pred ccChHHHHHHHHhhh
Q 000406 1541 HLNGVYASLVRAETE 1555 (1560)
Q Consensus 1541 ~~~g~y~~l~~~q~~ 1555 (1560)
++|.|++||+.|..
T Consensus 553 -~~g~y~~l~~~~~~ 566 (567)
T COG1132 553 -KGGLYARLYQAQGG 566 (567)
T ss_pred -cCCHHHHHHHHhhc
Confidence 58999999999864
No 15
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.6e-82 Score=816.75 Aligned_cols=568 Identities=23% Similarity=0.343 Sum_probs=479.2
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 979 LSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFC 1058 (1560)
Q Consensus 979 ~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 1058 (1560)
+++++++.+++++.+++++++.++..++....|+++..+++....... . ......+..+++++.++..++.+++.++.
T Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (588)
T PRK11174 10 TRWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENI-P-REALLPPFILLILLFVLRALLAWLRERVG 87 (588)
T ss_pred hHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-c-hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456788888888888888888888888888899999888876542111 1 11222333444455556677778888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1059 GWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRL 1138 (1560)
Q Consensus 1059 ~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l 1138 (1560)
...+.++..++|..+|++++++|+.||+ ++++|++++|+++|++.+++++...+..++.+++..++.++++++++|.+
T Consensus 88 ~~~~~~~~~~lr~~~~~~ll~~~~~~~~--~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 165 (588)
T PRK11174 88 FKAGQHIRQQIRQQVLDKLQQLGPAWIQ--GKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAA 165 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCchhhc--cCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999987 78999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHH
Q 000406 1139 TLVAAALTPFTLGASYLS-LIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQI 1217 (1560)
Q Consensus 1139 ~lv~l~~ipl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~ 1217 (1560)
++++++++|++++...+. .......+..++...+..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+.
T Consensus 166 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 245 (588)
T PRK11174 166 GLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRM 245 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888888776655433 3333333333566778889999999999999999999999999999999998888877777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHH---------HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Q 000406 1218 LGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVV---------YKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAV 1288 (1560)
Q Consensus 1218 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~---------~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri 1288 (1560)
......+...+..+..+++.+++++.+ .|.+++|.+ +..+++...+..|+..+...+.....+..+.+|+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri 324 (588)
T PRK11174 246 AFLSSAVLEFFASISIALVAVYFGFSY-LGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESL 324 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666555555545545554443 377777653 1222344455678999999999999999999999
Q ss_pred HHHhccCCccccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC
Q 000406 1289 LQITKRKPLIDNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP 1368 (1560)
Q Consensus 1289 ~~i~~~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p 1368 (1560)
.++++.+++.+.......+....+.|+|+||+|.|++ ++++|+|+||+|+|||++||||+||||||||+++|+|+| |
T Consensus 325 ~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p 401 (588)
T PRK11174 325 VTFLETPLAHPQQGEKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P 401 (588)
T ss_pred HHHHcCCCcccCCCccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C
Confidence 9999765432211111111112346999999988864 346999999999999999999999999999999999999 9
Q ss_pred CccEEEECCEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccC
Q 000406 1369 NQGKVMIEGVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGE 1448 (1560)
Q Consensus 1369 ~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge 1448 (1560)
++|+|++||+|+++++.+++|++|+||||||+||+|||||||++++|+++++|+++|++.++++++|.++|+||||.|||
T Consensus 402 ~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge 481 (588)
T PRK11174 402 YQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGD 481 (588)
T ss_pred CCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEE
Q 000406 1449 SGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAV 1528 (1560)
Q Consensus 1449 ~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~I 1528 (1560)
+|.+|||||||||||||||+++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++..||+|+||++|+|
T Consensus 482 ~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i 561 (588)
T PRK11174 482 QAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQI 561 (588)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeE
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred EEecCHHHHHhhccChHHHHHHHHhhhh
Q 000406 1529 VEYGSHETLLASHLNGVYASLVRAETEA 1556 (1560)
Q Consensus 1529 vE~Gt~~eLl~~~~~g~y~~l~~~q~~~ 1556 (1560)
+|.|+|+||++ +++.|+++++.|.+.
T Consensus 562 ~e~G~~~eL~~--~~~~y~~l~~~q~~~ 587 (588)
T PRK11174 562 VQQGDYAELSQ--AGGLFATLLAHRQEE 587 (588)
T ss_pred eecCCHHHHHh--cchHHHHHHHHhhcC
Confidence 99999999998 579999999998764
No 16
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=4.8e-81 Score=814.46 Aligned_cols=563 Identities=35% Similarity=0.485 Sum_probs=490.3
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 978 QLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGF 1057 (1560)
Q Consensus 978 ~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 1057 (1560)
.+.+++++.++.+..++.++++.++...+....|++++.+++....... ..........++++.++..++.+++.++
T Consensus 148 ~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 224 (711)
T TIGR00958 148 LLFRLLGLSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKG---PPALASAIFFMCLLSIASSVSAGLRGGS 224 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556778888888888888888888888888889999888887653211 1111122333444455566777778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1058 CGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWR 1137 (1560)
Q Consensus 1058 ~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~ 1137 (1560)
..+.+.++..++|..+|++++++|+.||+ +++.|++++|+++|++.+++.+...+..++..++.+++.+++++.++|.
T Consensus 225 ~~~~~~~~~~~lr~~l~~~ll~~~~~~f~--~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~ 302 (711)
T TIGR00958 225 FNYTMARINLRIREDLFRSLLRQDLGFFD--ENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPR 302 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHc--CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 88999999999999999999999999987 6899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHH
Q 000406 1138 LTLVAAALTPFTLGASYLSL-IINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQ 1216 (1560)
Q Consensus 1138 l~lv~l~~ipl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~ 1216 (1560)
+++++++.+|+.++...+.. ......+..++...+..+.+.|+++|+++||+|+.|+.+.++|.+..++..+...+...
T Consensus 303 l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 382 (711)
T TIGR00958 303 LTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKAL 382 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888887766554433 33333334456677788999999999999999999999999999999999888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCC
Q 000406 1217 ILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKP 1296 (1560)
Q Consensus 1217 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~ 1296 (1560)
.......+...+..+..++++++|++++..|.++.|.+++++.+......++..+...+.++..+..+.+|+.++++.++
T Consensus 383 ~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 462 (711)
T TIGR00958 383 AYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKP 462 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 77666666666777777888899999999999999999999999999999999999999999999999999999998765
Q ss_pred ccccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEEC
Q 000406 1297 LIDNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIE 1376 (1560)
Q Consensus 1297 ~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~Id 1376 (1560)
+.++.... .+.+..+.|+|+||+|+|++++++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++|
T Consensus 463 ~~~~~~~~-~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~id 541 (711)
T TIGR00958 463 NIPLTGTL-APLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLD 541 (711)
T ss_pred CCCCCCCC-CCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEEC
Confidence 53322111 11222457999999999986555679999999999999999999999999999999999999999999999
Q ss_pred CEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChH
Q 000406 1377 GVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGG 1456 (1560)
Q Consensus 1377 Gvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGG 1456 (1560)
|+|+++++.+++|++|+||||||+||+|||||||.++.+++++++++++++.++++++|.++|+||||.+||+|.+||||
T Consensus 542 g~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGG 621 (711)
T TIGR00958 542 GVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGG 621 (711)
T ss_pred CEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHH
Confidence 99999999999999999999999999999999999998889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHH
Q 000406 1457 QKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHET 1536 (1560)
Q Consensus 1457 QrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~e 1536 (1560)
|||||||||||+++|+|||||||||+||++||+.|++ ....+++|+|+||||++++..||+|+||++|+|+|.|+|+|
T Consensus 622 QkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~e 699 (711)
T TIGR00958 622 QKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQ 699 (711)
T ss_pred HHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHH
Confidence 9999999999999999999999999999999999999 33457899999999999999999999999999999999999
Q ss_pred HHhhccChHHHHHH
Q 000406 1537 LLASHLNGVYASLV 1550 (1560)
Q Consensus 1537 Ll~~~~~g~y~~l~ 1550 (1560)
|++ +++.|++|+
T Consensus 700 L~~--~~~~y~~lv 711 (711)
T TIGR00958 700 LME--DQGCYKHLV 711 (711)
T ss_pred HHh--CCCchHhcC
Confidence 998 578998874
No 17
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.7e-80 Score=809.98 Aligned_cols=554 Identities=28% Similarity=0.364 Sum_probs=485.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 986 QRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGWAGTKL 1065 (1560)
Q Consensus 986 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 1065 (1560)
.++.++.++..++++++..++....|+++..+++...... .......+.+.++++.++..++.+++.++....+.++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (686)
T TIGR03797 131 LRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDA---DRSLLVQIALALLAAAVGAAAFQLAQSLAVLRLETRM 207 (686)
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666666677777777777778888888777655321 1112233444455555666778888888999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1066 TMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTLVAAAL 1145 (1560)
Q Consensus 1066 ~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~lv~l~~ 1145 (1560)
..++|..+|++++++|+.||+ ++++|++++|+. |++.+++++...+...+.+++..+++++++++++|.++++++++
T Consensus 208 ~~~l~~~~~~~ll~~~~~~~~--~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~ 284 (686)
T TIGR03797 208 DASLQAAVWDRLLRLPVSFFR--QYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLALVAVAL 284 (686)
T ss_pred HHHHHHHHHHHHHcCCHHHHC--CCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 789999999997 89999999999998989898888899999999999999998888
Q ss_pred HHHHHHHHHHHHH-HhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 000406 1146 TPFTLGASYLSLI-INVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILGLTLGF 1224 (1560)
Q Consensus 1146 ipl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1224 (1560)
+|+.++..++... .....+...+...+..+.+.|+++|+++||+++.|+.+.++|.+..++..+...+...+......+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (686)
T TIGR03797 285 ALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENLLTVF 364 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877665544333 333333345666778899999999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCcccccccc
Q 000406 1225 SQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLIDNVKGR 1304 (1560)
Q Consensus 1225 ~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~~~~~~~ 1304 (1560)
...+..+..++++|+|++++..|.+++|.++++.++...+..|+..+...+..+..+..+++|+.++++.+++.+...
T Consensus 365 ~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~-- 442 (686)
T TIGR03797 365 NAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDEAK-- 442 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCc--
Confidence 888888888999999999999999999999999999999999999999999999999999999999987655432211
Q ss_pred ccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCC
Q 000406 1305 KLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREIN 1384 (1560)
Q Consensus 1305 ~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~ 1384 (1560)
.......+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||+|+++++
T Consensus 443 ~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i~~~~ 521 (686)
T TIGR03797 443 TDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDLAGLD 521 (686)
T ss_pred CCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcCcCC
Confidence 1111123579999999999743 357999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000406 1385 VKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIA 1464 (1560)
Q Consensus 1385 l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLA 1464 (1560)
++++|++|+||||||+||+|||||||++++| ++++++++|++.++++++|.++|+||||++||+|.+|||||||||+||
T Consensus 522 ~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRialA 600 (686)
T TIGR03797 522 VQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRLLIA 600 (686)
T ss_pred HHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999999999988 999999999999999999999999999999999999999999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHhhccCh
Q 000406 1465 RAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLASHLNG 1544 (1560)
Q Consensus 1465 RALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~~~~~g 1544 (1560)
|||+++|+|||||||||+||++||+.|++.|++. ++|+|+||||+++++.||+|+||++|+|+|.|+|+||++ +++
T Consensus 601 RAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~--~~~ 676 (686)
T TIGR03797 601 RALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMA--REG 676 (686)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHh--CCc
Confidence 9999999999999999999999999999999986 689999999999999999999999999999999999998 579
Q ss_pred HHHHHHHHh
Q 000406 1545 VYASLVRAE 1553 (1560)
Q Consensus 1545 ~y~~l~~~q 1553 (1560)
.|++|++.|
T Consensus 677 ~y~~l~~~q 685 (686)
T TIGR03797 677 LFAQLARRQ 685 (686)
T ss_pred HHHHHHHhc
Confidence 999999876
No 18
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.2e-80 Score=737.67 Aligned_cols=550 Identities=25% Similarity=0.372 Sum_probs=487.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 996 GFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGWAGTKLTMRVRELLFR 1075 (1560)
Q Consensus 996 ~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~Lr~~l~~ 1075 (1560)
..+++.+.+++.....++++..+..++.... ......+...++++.++..+..+.+......++.++...+|..+++
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~---~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~ 81 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEGQL---FQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLD 81 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556666666677777777777765432 2334455666677777888888888888899999999999999999
Q ss_pred HHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1076 SILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTLVAAALTPFTLGASYL 1155 (1560)
Q Consensus 1076 ~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~lv~l~~ipl~~~~~~~ 1155 (1560)
++.+.+|.|-. ..|+|+..+.+...++.++.++...++.++.+.+..++.++.+++++|.-+++++++.|++.+++++
T Consensus 82 ~l~~~gp~~~~--~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMil 159 (559)
T COG4988 82 KLAKLGPAFIA--QKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMIL 159 (559)
T ss_pred HHHhCChhhhc--CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999865 7899999999999999999999999999999999999999999999999999999999999988877
Q ss_pred HHHHhcch-hhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1156 SLIINVGP-KIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILGLTLGFSQGAMYVAYT 1234 (1560)
Q Consensus 1156 ~~~~~~~~-~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1234 (1560)
........ +++...+.+.++++.+.++|+.|+|+|++.+...+++.+...++.+.+++.-+..-+...+..++.++..+
T Consensus 160 vg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiA 239 (559)
T COG4988 160 VGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIA 239 (559)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66555433 44467889999999999999999999999999999999999999999999888877777777777777777
Q ss_pred HHHHHHHHHHhc-CcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCcccccccc-ccCCCCCc
Q 000406 1235 FTLWFGAYLVKQ-GHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLIDNVKGR-KLERSKPL 1312 (1560)
Q Consensus 1235 ~~~~~g~~lv~~-g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~~~~~~~-~~~~~~~~ 1312 (1560)
++..+.+..... |.+++...+.++++.--+..|+..+...++....+..+.+.+..+.+.+.+..+.... ...+..+.
T Consensus 240 lvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~ 319 (559)
T COG4988 240 LVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPI 319 (559)
T ss_pred HHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCc
Confidence 665554444445 8999999888888888899999999999999999999999999998876554332221 22333344
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.++++|++|+|++.+ ++++|+||+++||+++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+.||+++
T Consensus 320 ei~~~~l~~~y~~g~--~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i 397 (559)
T COG4988 320 EISLENLSFRYPDGK--PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQI 397 (559)
T ss_pred eeeecceEEecCCCC--cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHe
Confidence 577779999998653 699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCC
Q 000406 1393 ALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSR 1472 (1560)
Q Consensus 1393 ~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ 1472 (1560)
++|||+|+||+|||||||.+++++++|++++++++.+++.+|+.. |+|+||++||+|.+|||||+|||+|||||+++++
T Consensus 398 ~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~ 476 (559)
T COG4988 398 SWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPAS 476 (559)
T ss_pred eeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHhhccChHHHHHHHH
Q 000406 1473 VLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLASHLNGVYASLVRA 1552 (1560)
Q Consensus 1473 ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~~l~~~ 1552 (1560)
++|||||||+||.+||+.|++.|.++++++|||+||||++.+++||+|+|||+|+++|.|+|++|.+ ++|.|++|+++
T Consensus 477 l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~--~~~~y~~l~~~ 554 (559)
T COG4988 477 LLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSE--KQGLYANLLKQ 554 (559)
T ss_pred EEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhh--cCcHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999998 68999999999
Q ss_pred hhh
Q 000406 1553 ETE 1555 (1560)
Q Consensus 1553 q~~ 1555 (1560)
|.+
T Consensus 555 q~~ 557 (559)
T COG4988 555 QEG 557 (559)
T ss_pred Hhc
Confidence 865
No 19
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=3.6e-80 Score=809.56 Aligned_cols=562 Identities=27% Similarity=0.345 Sum_probs=490.8
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 979 LSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFC 1058 (1560)
Q Consensus 979 ~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 1058 (1560)
+.+++.+.++.++.++..++++++..++....|+++..+++.+..... ......+.+.++++.++..++.+++.++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (708)
T TIGR01193 144 LLKFIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM---MGTLGIISIGLIIAYIIQQILSYIQIFLL 220 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777777777777777777777777888888888776653211 11222333444445556667788888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1059 GWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRL 1138 (1560)
Q Consensus 1059 ~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l 1138 (1560)
.+.+.++..++|..+|++++++|+.||+ ++++|++++|++ |++.+++++...+..++.++++.++.++++++++|.+
T Consensus 221 ~~~~~~~~~~l~~~~~~~ll~l~~~~f~--~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 297 (708)
T TIGR01193 221 NVLGQRLSIDIILSYIKHLFELPMSFFS--TRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLL 297 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhC--CCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 9999999999999999999999999987 789999999998 9999999999998888889888888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHH
Q 000406 1139 TLVAAALTPFTLGASYLSL-IINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQI 1217 (1560)
Q Consensus 1139 ~lv~l~~ipl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~ 1217 (1560)
++++++++|++++..++.. ......+.......+..+.+.|+++|+++||+++.|+.+.++|.+...+..+...+....
T Consensus 298 ~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 377 (708)
T TIGR01193 298 FLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKA 377 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888776655443 333333344566778889999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCc
Q 000406 1218 LGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPL 1297 (1560)
Q Consensus 1218 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~ 1297 (1560)
......+...+..+..++++++|++++..|.+|+|.++++.++...+..|+..+...+..+..+..+++|+.++++.+++
T Consensus 378 ~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e 457 (708)
T TIGR01193 378 DQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSE 457 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 87777777777778888899999999999999999999999999999999999999999999999999999999887655
Q ss_pred cccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECC
Q 000406 1298 IDNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEG 1377 (1560)
Q Consensus 1298 ~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdG 1377 (1560)
.+........+...+.|+|+||+|+|+. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||
T Consensus 458 ~~~~~~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg 535 (708)
T TIGR01193 458 FINKKKRTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNG 535 (708)
T ss_pred ccccccccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECC
Confidence 3322111111222457999999999973 34699999999999999999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcC-CCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChH
Q 000406 1378 VDLREINVKWLRKQTALVGQEPALFAGTIRDNIALG-NPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGG 1456 (1560)
Q Consensus 1378 vdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g-~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGG 1456 (1560)
+|+++++++++|++|+||||||+||+|||||||.++ ++++++++++++++.++++++|.++|+||||+|||+|.+||||
T Consensus 536 ~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgG 615 (708)
T TIGR01193 536 FSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGG 615 (708)
T ss_pred EEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHH
Confidence 999999999999999999999999999999999998 5789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHH
Q 000406 1457 QKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHET 1536 (1560)
Q Consensus 1457 QrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~e 1536 (1560)
|||||+|||||+++|+|||||||||+||++||+.|++.|++. +++|+|+||||++++..||+|+||++|+++|.|+|+|
T Consensus 616 QrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~ 694 (708)
T TIGR01193 616 QKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDE 694 (708)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999999999975 7899999999999999999999999999999999999
Q ss_pred HHhhccChHHHHHHH
Q 000406 1537 LLASHLNGVYASLVR 1551 (1560)
Q Consensus 1537 Ll~~~~~g~y~~l~~ 1551 (1560)
|++ ++|.|++|++
T Consensus 695 L~~--~~~~y~~l~~ 707 (708)
T TIGR01193 695 LLD--RNGFYASLIH 707 (708)
T ss_pred HHh--cCCcHHHHhh
Confidence 998 5799999875
No 20
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=1.1e-79 Score=806.01 Aligned_cols=562 Identities=25% Similarity=0.348 Sum_probs=490.8
Q ss_pred hHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 978 QLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGF 1057 (1560)
Q Consensus 978 ~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 1057 (1560)
.++.++...++.+..++..++++++..++....|+++..+++....... ......+.+.++++.++..++.+++.++
T Consensus 141 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 217 (710)
T TIGR03796 141 LLRALWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR---QDWLRPLLLGMGLTALLQGVLTWLQLYY 217 (710)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666677777777777777777777777788888887776553221 1112233344444555667788888889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1058 CGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWR 1137 (1560)
Q Consensus 1058 ~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~ 1137 (1560)
....+.++..+++..+|++++++|+.||+ ++++|++++|++.| +.+++++...+..++.+++++++.++++++++|.
T Consensus 218 ~~~~~~~~~~~l~~~~~~~ll~l~~~~~~--~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 294 (710)
T TIGR03796 218 LRRLQIKLAVGMSARFLWHILRLPVRFFA--QRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPV 294 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHc--CCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999987 78999999999988 6899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHH
Q 000406 1138 LTLVAAALTPFTLGASYLSLI-INVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQ 1216 (1560)
Q Consensus 1138 l~lv~l~~ipl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~ 1216 (1560)
+++++++++|+.+++.++... .....+.......+..+.+.|++.|+++||+++.++.+.++|.+...+..+...+...
T Consensus 295 l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 374 (710)
T TIGR03796 295 LTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGV 374 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998888877766554433 3333333455667788999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCC
Q 000406 1217 ILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKP 1296 (1560)
Q Consensus 1217 ~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~ 1296 (1560)
+..+...+...+..+..++++++|++++..|.+++|.++++.++...+..|+..+...+..+..+..+++|+.++++.++
T Consensus 375 ~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~ 454 (710)
T TIGR03796 375 LTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPV 454 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 88888888888888888999999999999999999999999999999999999999999999999999999999998765
Q ss_pred cccccc----c-cccC-CCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCc
Q 000406 1297 LIDNVK----G-RKLE-RSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQ 1370 (1560)
Q Consensus 1297 ~~~~~~----~-~~~~-~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~ 1370 (1560)
+.+... . .... ....+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++
T Consensus 455 e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~ 533 (710)
T TIGR03796 455 DPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWS 533 (710)
T ss_pred ccccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCC
Confidence 533211 0 0111 1224579999999999853 3579999999999999999999999999999999999999999
Q ss_pred cEEEECCEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCC
Q 000406 1371 GKVMIEGVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESG 1450 (1560)
Q Consensus 1371 G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G 1450 (1560)
|+|++||+|+++++++++|++|+||||||.||+|||||||.+++|+++++++++|++.++++++|.++|+||||++||+|
T Consensus 534 G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G 613 (710)
T TIGR03796 534 GEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGG 613 (710)
T ss_pred cEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCC
Confidence 99999999999999999999999999999999999999999998899999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEE
Q 000406 1451 VQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVE 1530 (1560)
Q Consensus 1451 ~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE 1530 (1560)
.+|||||||||||||||+++|+|||||||||+||++||+.|.+.|++ .++|+|+||||++++..||||+||++|+|+|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~ 691 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQ 691 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999999987 5899999999999999999999999999999
Q ss_pred ecCHHHHHhhccChHHHHHH
Q 000406 1531 YGSHETLLASHLNGVYASLV 1550 (1560)
Q Consensus 1531 ~Gt~~eLl~~~~~g~y~~l~ 1550 (1560)
.|+|+||++ +++.|++|+
T Consensus 692 ~G~~~~Ll~--~~~~y~~l~ 709 (710)
T TIGR03796 692 RGTHEELWA--VGGAYARLI 709 (710)
T ss_pred ecCHHHHHH--cCCcHHHHh
Confidence 999999998 578999987
No 21
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.5e-79 Score=780.35 Aligned_cols=564 Identities=24% Similarity=0.340 Sum_probs=481.8
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccch-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 981 EIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTAS-TLRRDVRYLSLALVGLGFGCIIFMTGQQGFCG 1059 (1560)
Q Consensus 981 ~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1059 (1560)
+++++.+++++.+++++++.++..++....|.+++.+++........ ..........+.++++.++..++.++..++.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (574)
T PRK11160 6 PFLKLYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVSH 85 (574)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666777777777888888777777777788777777654321110 00001111122344455566777788888888
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1060 WAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLT 1139 (1560)
Q Consensus 1060 ~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~ 1139 (1560)
.++.++..++|..+|++++++|+.||+ +.++|++++|+++|++.+++++...++.++.+++..++.++++++++|.++
T Consensus 86 ~~~~~~~~~lR~~l~~~l~~~~~~~~~--~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 163 (574)
T PRK11160 86 DATFRVLTHLRVFTFSKLLPLSPAGLA--RYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLA 163 (574)
T ss_pred HHHHHHHHHHHHHHHHHhhccChHhhc--cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999987 789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHH-HHH-HHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHH
Q 000406 1140 LVAAALTPFTLGA-SYL-SLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQI 1217 (1560)
Q Consensus 1140 lv~l~~ipl~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~ 1217 (1560)
+++++++|++++. .++ ........+..+....+..+.+.|.++|+++||+|+.++.+.++|++..++..+...+..+.
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 243 (574)
T PRK11160 164 LTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANL 243 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988777765443 232 33333333444667778889999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCC
Q 000406 1218 LGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVL-SSFSVGQLAGLAPDTSMAATAIPAVLQITKRKP 1296 (1560)
Q Consensus 1218 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~-~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~ 1296 (1560)
.+....+..++..+..++++++|++++ .|.++.|.+++++.+... ...++..+...+..+..+..+++|+.++++.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~ 322 (574)
T PRK11160 244 TGLSQALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKP 322 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 888888888888888888889999884 789999998887766544 345777888888999999999999999998765
Q ss_pred ccccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEEC
Q 000406 1297 LIDNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIE 1376 (1560)
Q Consensus 1297 ~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~Id 1376 (1560)
+.+....... ....+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++|
T Consensus 323 ~~~~~~~~~~-~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~ 400 (574)
T PRK11160 323 EVTFPTTSTA-AADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLN 400 (574)
T ss_pred CCCCCcccCC-CCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEC
Confidence 5322111111 1224579999999999753 3469999999999999999999999999999999999999999999999
Q ss_pred CEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChH
Q 000406 1377 GVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGG 1456 (1560)
Q Consensus 1377 Gvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGG 1456 (1560)
|+|+++++.+++|++|+||||||+||++||+|||++++|++++++++++++.+++++++.+ |+||||.|||+|.+||||
T Consensus 401 g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgG 479 (574)
T PRK11160 401 GQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGG 479 (574)
T ss_pred CEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHH
Confidence 9999999999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHH
Q 000406 1457 QKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHET 1536 (1560)
Q Consensus 1457 QrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~e 1536 (1560)
|||||||||||+++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++..||+|++|++|+|+|.|+|+|
T Consensus 480 qrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~ 559 (574)
T PRK11160 480 EQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQE 559 (574)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHH
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred HHhhccChHHHHHHHH
Q 000406 1537 LLASHLNGVYASLVRA 1552 (1560)
Q Consensus 1537 Ll~~~~~g~y~~l~~~ 1552 (1560)
|++ ++|.|++||+.
T Consensus 560 l~~--~~g~y~~l~~~ 573 (574)
T PRK11160 560 LLA--QQGRYYQLKQR 573 (574)
T ss_pred HHh--cCcHHHHHHhh
Confidence 998 68999999864
No 22
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.9e-79 Score=838.67 Aligned_cols=570 Identities=30% Similarity=0.486 Sum_probs=489.7
Q ss_pred cHHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000406 331 GLFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAY 410 (1560)
Q Consensus 331 ~~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 410 (1560)
.+..++++.++..+ .++++++++++.+++.|+++++++++++.+.... .+......+++++++++++.+++.+
T Consensus 812 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~~~~~~~l~~~~~~i~~~~~~~ 884 (1466)
T PTZ00265 812 NLRIVYREIFSYKK-DVTIIALSILVAGGLYPVFALLYAKYVSTLFDFA------NLEANSNKYSLYILVIAIAMFISET 884 (1466)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566666655433 4778888899999999999999999999765321 1122234567777788888888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhcc-CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 411 LEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDT-EVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGF 489 (1560)
Q Consensus 411 l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~-~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~ 489 (1560)
++.++..++++++..++|.++|++++++|+.|||. +.++|++++|+++|++.++..+...+..++..++.+++++++++
T Consensus 885 l~~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~ 964 (1466)
T PTZ00265 885 LKNYYNNVIGEKVEKTMKRRLFENILYQEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSF 964 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999985 34899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----H-------------HHHHHHHHHHHHHHHHhhHHHHHHhcch
Q 000406 490 LRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTS-----K-------------EEASYRRAGSVAEQAISSIRTVFSFVAE 551 (1560)
Q Consensus 490 ~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~-----~-------------~~~~~~~~~~~~~E~l~gi~tIka~~~e 551 (1560)
+++|.++++++++++++. ..+.+..+.... . ..+...+....+.|++.|+++||+|+.|
T Consensus 965 ~~~~~l~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e 1041 (1466)
T PTZ00265 965 YFCPIVAAVLTGTYFIFM---RVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLE 1041 (1466)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcch
Confidence 999998877654443333 333332221110 0 1223456678999999999999999999
Q ss_pred HHHHHHHHHHHHhHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 552 DHFAVRYAGLLADSIPFGAKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLS 631 (1560)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~ 631 (1560)
+.+.++|.+..+...+...+.....+...++..++.++..++++|+|++++..|.+++|.++++++++.....++..+..
T Consensus 1042 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~ 1121 (1466)
T PTZ00265 1042 DYFCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMS 1121 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888888888888888888888889999999999999999999999887666655556778888
Q ss_pred HHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCc---CCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEec
Q 000406 632 YFAQFAQGTVAATRVFEIIDRVPEIDPYNSEGRK---LSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVG 708 (1560)
Q Consensus 632 ~~~~~~~a~~a~~Ri~~~l~~~~~~~~~~~~~~~---~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG 708 (1560)
.+..+.++..+++|++++++.+++.+..+..... .+...|.|+|+||+|+||++++.++|+|+||+|++|+++||||
T Consensus 1122 ~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG 1201 (1466)
T PTZ00265 1122 LKGDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVG 1201 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEEC
Confidence 9999999999999999999876543211111111 1234578999999999986555679999999999999999999
Q ss_pred CCCCChHHHHHHHhcCCCC------------------------------------------------------CccEEEE
Q 000406 709 TSGGGKSTVFALIERFYDP------------------------------------------------------TKGLITL 734 (1560)
Q Consensus 709 ~sGsGKSTLl~ll~g~~~~------------------------------------------------------~~G~I~i 734 (1560)
+||||||||+++|+|+|+| ++|+|++
T Consensus 1202 ~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~i 1281 (1466)
T PTZ00265 1202 ETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILL 1281 (1466)
T ss_pred CCCCCHHHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEE
Confidence 9999999999999999998 6999999
Q ss_pred CCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCCh
Q 000406 735 DGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSG 814 (1560)
Q Consensus 735 ~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSg 814 (1560)
||+|+++++.+++|++|+||+|+|.||++||+|||.+|.++.+++++++||+.+++++||.+||+||||.+|++|.+|||
T Consensus 1282 dG~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSG 1361 (1466)
T PTZ00265 1282 DGVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSG 1361 (1466)
T ss_pred CCEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCccccccCCEEEEEeC----CeEE
Q 000406 815 GQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKNANTIVVLDQ----GSVV 888 (1560)
Q Consensus 815 GQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~~D~i~vl~~----G~iv 888 (1560)
||||||||||||+++|+|||||||||+||+++++.|++.|+++. +++|+|+||||+++++.||+|+||++ |+++
T Consensus 1362 GQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv 1441 (1466)
T PTZ00265 1362 GQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFV 1441 (1466)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEE
Confidence 99999999999999999999999999999999999999999884 69999999999999999999999999 9955
Q ss_pred -EecChhhHhh-hcchHHHHHHHH
Q 000406 889 -EIGNHRQLLE-RGGAYHDLVKLA 910 (1560)
Q Consensus 889 -~~G~~~~l~~-~~~~~~~l~~~~ 910 (1560)
|.|+|+||++ ++|.|+++++.+
T Consensus 1442 ~e~Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1442 QAHGTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred EEecCHHHHHhcCCChHHHHHhhc
Confidence 8999999998 589999998753
No 23
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=3.7e-79 Score=798.39 Aligned_cols=558 Identities=26% Similarity=0.366 Sum_probs=486.5
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 979 LSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFC 1058 (1560)
Q Consensus 979 ~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 1058 (1560)
+..++.+.++.++.+...++++++..++....|+++..+++....... ......+.+.++++.++..++.+++.++.
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (694)
T TIGR03375 135 KHWFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQA---FETLWVLAIGVALAIVFDFVLKTLRSYFL 211 (694)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc---HhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666666777777777777777777777888888887776543211 11222233334444555667788888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1059 GWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRL 1138 (1560)
Q Consensus 1059 ~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l 1138 (1560)
.+.+.++..++|..+|++++++|+.| + ++++|++++|+ +|++.+++++...+...+.++++.++.++++++++|.+
T Consensus 212 ~~~~~~~~~~l~~~~~~~ll~l~~~~-~--~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 287 (694)
T TIGR03375 212 DVAGKKADLILSAKLFERVLGLRMEA-R--PASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPL 287 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccc-C--CCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999999999987 3 57999999999 79999999999999889999999988889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHH
Q 000406 1139 TLVAAALTPFTLGASYLSL-IINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQI 1217 (1560)
Q Consensus 1139 ~lv~l~~ipl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~ 1217 (1560)
++++++.+|++++..++.. ......+.......+..+.+.|+++|+++||+++.|+.+.++|++..++..+...+..++
T Consensus 288 ~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 367 (694)
T TIGR03375 288 VWVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFL 367 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888888776655443 333333344567778889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCc
Q 000406 1218 LGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPL 1297 (1560)
Q Consensus 1218 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~ 1297 (1560)
......+...+..+..++++++|++++..|.+++|.++++..+...+..|+..+...+.++..+..+++|+.++++.+++
T Consensus 368 ~~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e 447 (694)
T TIGR03375 368 SNLATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVE 447 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 88888888888888888999999999999999999999999999999999999999999999999999999999987654
Q ss_pred cccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECC
Q 000406 1298 IDNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEG 1377 (1560)
Q Consensus 1298 ~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdG 1377 (1560)
.+............+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||
T Consensus 448 ~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg 526 (694)
T TIGR03375 448 RPEGTRFLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDG 526 (694)
T ss_pred CCCCCCCCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 33211111111224579999999999753 35699999999999999999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHH
Q 000406 1378 VDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQ 1457 (1560)
Q Consensus 1378 vdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQ 1457 (1560)
+|+++++++++|++|+||||||+||+|||||||.+++|++++++++++++.++++++|.++|+||||.+||+|.+|||||
T Consensus 527 ~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQ 606 (694)
T TIGR03375 527 VDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQ 606 (694)
T ss_pred EEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000406 1458 KQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1458 rQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||||+|||||+++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++..||+|+||++|+|+|.|+|+||
T Consensus 607 rQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eL 686 (694)
T TIGR03375 607 RQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQV 686 (694)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHH
Confidence 99999999999999999999999999999999999999999889999999999999999999999999999999999999
Q ss_pred HhhccCh
Q 000406 1538 LASHLNG 1544 (1560)
Q Consensus 1538 l~~~~~g 1544 (1560)
+++.+.|
T Consensus 687 l~~~~~~ 693 (694)
T TIGR03375 687 LEALRKG 693 (694)
T ss_pred HHHhhcC
Confidence 9854443
No 24
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=8.2e-79 Score=782.37 Aligned_cols=567 Identities=21% Similarity=0.274 Sum_probs=477.5
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 332 LFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYL 411 (1560)
Q Consensus 332 ~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l 411 (1560)
+.++++|.++. ++.++++++++++..++.+..+++++.++|.+.... .+ ......++.+++++.++..++.++
T Consensus 10 ~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~ 82 (588)
T PRK11174 10 TRWLKQQSKPA-KRWLNLSILLGFLSGLLLIAQAWLLATILQALIIEN--IP----REALLPPFILLILLFVLRALLAWL 82 (588)
T ss_pred hHHHHHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--Cc----hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567776654 455677788888888888889999999998764211 11 011223344455555666677788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 412 EITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLR 491 (1560)
Q Consensus 412 ~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~ 491 (1560)
+.++....+.++..++|.+++++++++|+.+|+.. ++|++++|+++|++.+++.+...+..++..++.+++.+++++.+
T Consensus 83 ~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~-~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 161 (588)
T PRK11174 83 RERVGFKAGQHIRQQIRQQVLDKLQQLGPAWIQGK-PAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPI 161 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccC-CHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888889999999999999999999999999755 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhH
Q 000406 492 SWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAK 571 (1560)
Q Consensus 492 s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k 571 (1560)
+|++++++++++|+++++...+.+..++..++..+..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...+
T Consensus 162 ~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 241 (588)
T PRK11174 162 NWAAGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTME 241 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888888888888888889999999999999999999999999999999988888777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 572 LGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAA---------IACFFGVNVGGRGLALSLSYFAQFAQGTVA 642 (1560)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~---------~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a 642 (1560)
..........+..++..+..+++.+++++.+. |.++.|.+ ++++.+...+..|+..+...+..+.++..+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~ 320 (588)
T PRK11174 242 VLRMAFLSSAVLEFFASISIALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGA 320 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66665555555555444444444444444433 66666643 222233344556888888889999999999
Q ss_pred HHHHHHHHccCCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHh
Q 000406 643 ATRVFEIIDRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIE 722 (1560)
Q Consensus 643 ~~Ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~ 722 (1560)
++|+.++++.+++.++ ........+..+.|+|+||+|.|++ ++++|+|+||+|+|||++||||+||||||||+++|+
T Consensus 321 ~~ri~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~ 397 (588)
T PRK11174 321 AESLVTFLETPLAHPQ-QGEKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALL 397 (588)
T ss_pred HHHHHHHHcCCCcccC-CCccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHh
Confidence 9999999986543211 1111111112457999999987763 256999999999999999999999999999999999
Q ss_pred cCCCCCccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCC
Q 000406 723 RFYDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYD 802 (1560)
Q Consensus 723 g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~ 802 (1560)
|+| |++|+|++||+|+++++.+.+|++|+||||+|+||++||+|||.+|.++.++++++++|+.++++++++++|+|+|
T Consensus 398 g~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~d 476 (588)
T PRK11174 398 GFL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLD 476 (588)
T ss_pred cCC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccc
Confidence 999 9999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred cccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEE
Q 000406 803 TQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVL 882 (1560)
Q Consensus 803 t~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl 882 (1560)
|.+|++|.+|||||||||+|||||+++|+|||||||||+||+++++.+++.|+++.+++|+|+||||++++..||+|++|
T Consensus 477 T~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl 556 (588)
T PRK11174 477 TPIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVM 556 (588)
T ss_pred cccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999988899999999999999999999999
Q ss_pred eCCeEEEecChhhHhhhcchHHHHHHHHH
Q 000406 883 DQGSVVEIGNHRQLLERGGAYHDLVKLAS 911 (1560)
Q Consensus 883 ~~G~iv~~G~~~~l~~~~~~~~~l~~~~~ 911 (1560)
++|+++|.|+|+||+++++.|++++..+.
T Consensus 557 ~~G~i~e~G~~~eL~~~~~~y~~l~~~q~ 585 (588)
T PRK11174 557 QDGQIVQQGDYAELSQAGGLFATLLAHRQ 585 (588)
T ss_pred eCCeEeecCCHHHHHhcchHHHHHHHHhh
Confidence 99999999999999999999999987653
No 25
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.4e-78 Score=791.23 Aligned_cols=564 Identities=33% Similarity=0.537 Sum_probs=495.6
Q ss_pred ccHHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000406 330 VGLFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGA 409 (1560)
Q Consensus 330 ~~~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 409 (1560)
..+.++++|.++ .+..+++.+++.++..++..+.+++.+.++|.+..... . ......+++++++.++..++.
T Consensus 147 ~~~~~l~~~~~~-~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~ 218 (711)
T TIGR00958 147 DLLFRLLGLSGR-DWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKG---P----PALASAIFFMCLLSIASSVSA 218 (711)
T ss_pred hHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---H----HHHHHHHHHHHHHHHHHHHHH
Confidence 356677777764 45556677777888888888889999999998764221 1 112223344455556666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 410 YLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGF 489 (1560)
Q Consensus 410 ~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~ 489 (1560)
+++.+++.+.+.++..++|.+++++++++|+.||+.. ++|++++|+++|++.+++.+...+..++..++.+++.+++++
T Consensus 219 ~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~~~-~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~ 297 (711)
T TIGR00958 219 GLRGGSFNYTMARINLRIREDLFRSLLRQDLGFFDEN-KTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFML 297 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888888889999999999999999999999999765 899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHH
Q 000406 490 LRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFG 569 (1560)
Q Consensus 490 ~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~ 569 (1560)
.++|++++++++.+|+.+++...+.+...+..++.++..++..+.+.|+++|+++||+|++|+.+.++|.+..++..+..
T Consensus 298 ~~s~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~ 377 (711)
T TIGR00958 298 WLSPRLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLN 377 (711)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888889998888888888888889999999999999999999999999999999998887777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 570 AKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEI 649 (1560)
Q Consensus 570 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~ 649 (1560)
.+.....+....+..++..+..++++++|++++.+|.+++|.+++++.+...+..++..+...+..+.++..+++|+.++
T Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~ 457 (711)
T TIGR00958 378 KRKALAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEY 457 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666555555666666677788899999999999999999999998899999999999999999999999999999
Q ss_pred HccCCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCc
Q 000406 650 IDRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTK 729 (1560)
Q Consensus 650 l~~~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~ 729 (1560)
++.+++.++. ....+.+..+.|+|+||+|+||+++++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++
T Consensus 458 l~~~~~~~~~--~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~ 535 (711)
T TIGR00958 458 LDRKPNIPLT--GTLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTG 535 (711)
T ss_pred hCCCCCCCCC--CCCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCC
Confidence 9875543211 11112234578999999999986545679999999999999999999999999999999999999999
Q ss_pred cEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCC
Q 000406 730 GLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRG 809 (1560)
Q Consensus 730 G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g 809 (1560)
|+|.+||+|+++++.+.+|++|+||+|+|++|++||+|||.++.++.++++++++++.++++++++++|+|+||.+|++|
T Consensus 536 G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G 615 (711)
T TIGR00958 536 GQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKG 615 (711)
T ss_pred CEEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCC
Confidence 99999999999999999999999999999999999999999998888899999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEE
Q 000406 810 TQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVE 889 (1560)
Q Consensus 810 ~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~ 889 (1560)
.+|||||||||+||||++++|+|||||||||+||+++++.+++ . ...+++|+|+||||++++..||+|+||++|+|+|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~-~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive 693 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-S-RSRASRTVLLIAHRLSTVERADQILVLKKGSVVE 693 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-h-hccCCCeEEEEeccHHHHHhCCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999998 3 3346899999999999999999999999999999
Q ss_pred ecChhhHhhhcchHHHH
Q 000406 890 IGNHRQLLERGGAYHDL 906 (1560)
Q Consensus 890 ~G~~~~l~~~~~~~~~l 906 (1560)
.|+|+||+++++.|+++
T Consensus 694 ~Gt~~eL~~~~~~y~~l 710 (711)
T TIGR00958 694 MGTHKQLMEDQGCYKHL 710 (711)
T ss_pred eeCHHHHHhCCCchHhc
Confidence 99999999988888875
No 26
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=4.4e-78 Score=775.10 Aligned_cols=565 Identities=32% Similarity=0.447 Sum_probs=481.9
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 980 SEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCG 1059 (1560)
Q Consensus 980 ~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1059 (1560)
..++++.++.++.++.++++.++........++++..+++....... .....++.+.++++.++..++.++..+...
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 90 (582)
T PRK11176 14 RRLWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKAD---RSVLKWMPLVVIGLMILRGITSFISSYCIS 90 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555555555555444445556666655554432111 111122233334455566677777778888
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1060 WAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLT 1139 (1560)
Q Consensus 1060 ~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~ 1139 (1560)
+.+.++...+|..+++++++.|+.+|+ +...|++++|+++|++.+.+.+...+..++.+++++++.++++++++|.++
T Consensus 91 ~~~~~~~~~lr~~~~~~l~~~~~~~~~--~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 168 (582)
T PRK11176 91 WVSGKVVMTMRRRLFGHMMGMPVSFFD--KQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLS 168 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHhC--CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999986 789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHH
Q 000406 1140 LVAAALTPFTLGASYLSL-IINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQIL 1218 (1560)
Q Consensus 1140 lv~l~~ipl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 1218 (1560)
+++++++|+.++..+... ......+..+....+..+.+.|.++|+++||+++.++.+.++|++..++..+...+..+..
T Consensus 169 l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (582)
T PRK11176 169 LILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSAS 248 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888887666554433 3333233335566778899999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCcc
Q 000406 1219 GLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLI 1298 (1560)
Q Consensus 1219 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~ 1298 (1560)
.....+...+..+..++++++|++.+..|.+++|.+++++.+...+..|+..+...+..+..+..+.+|+.++.+.+++.
T Consensus 249 ~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~ 328 (582)
T PRK11176 249 SISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEK 328 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcC
Confidence 88888888888888888899999999999999999999999988899999999999999999999999999998765442
Q ss_pred ccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCE
Q 000406 1299 DNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGV 1378 (1560)
Q Consensus 1299 ~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGv 1378 (1560)
+... .. ..+..+.|+++||+|+|++. ++++|+|+||+|++||++||||+||||||||+++|+|+|+|++|+|++||+
T Consensus 329 ~~~~-~~-~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~ 405 (582)
T PRK11176 329 DEGK-RV-IERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGH 405 (582)
T ss_pred CCCC-cC-CCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCE
Confidence 2111 11 11223469999999999754 357999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCC-CCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHH
Q 000406 1379 DLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPK-ASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQ 1457 (1560)
Q Consensus 1379 di~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~-~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQ 1457 (1560)
|+++++.+++|++|+||||||++|+|||||||.+++++ .++++++++++.+++++++.++|+||||.+||+|.+|||||
T Consensus 406 ~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGq 485 (582)
T PRK11176 406 DLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQ 485 (582)
T ss_pred EhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHH
Confidence 99999999999999999999999999999999998654 79999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000406 1458 KQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1458 rQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||||+|||||+++|+|||||||||+||++||+.|.+.|++..+++|+|+||||+++++.||+|++|++|+|+|.|+|++|
T Consensus 486 rQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l 565 (582)
T PRK11176 486 RQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAEL 565 (582)
T ss_pred HHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred HhhccChHHHHHHHHhh
Q 000406 1538 LASHLNGVYASLVRAET 1554 (1560)
Q Consensus 1538 l~~~~~g~y~~l~~~q~ 1554 (1560)
++ +++.|++|+..|.
T Consensus 566 ~~--~~~~y~~l~~~~~ 580 (582)
T PRK11176 566 LA--QNGVYAQLHKMQF 580 (582)
T ss_pred Hh--CCChHHHHHHHHh
Confidence 98 5789999998764
No 27
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.2e-77 Score=767.31 Aligned_cols=561 Identities=32% Similarity=0.514 Sum_probs=497.9
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 333 FSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLE 412 (1560)
Q Consensus 333 ~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~ 412 (1560)
..++++++ .+ .++++.++.++..++....+++++.+++.+.. . ......+..+++++.++..++.++.
T Consensus 5 ~~l~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~------~~~~~~~~~~~~~~~~~~~v~~~~~ 72 (567)
T COG1132 5 RRLLKYLK--YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA---D------LGELLELLLLLLLLALLGGVLRALQ 72 (567)
T ss_pred HHHHHHHH--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---h------HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555554 44 56667777777777777888888888888761 0 1222334445555555667777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 413 ITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLRS 492 (1560)
Q Consensus 413 ~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~s 492 (1560)
.++..+.+.+...++|.++++++++.|+.+|+.. ++|++++|+++|++.++..+......+...++.+++.+++++..+
T Consensus 73 ~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~-~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (567)
T COG1132 73 SYLGSRLGQKIVADLRRDLFEKLLRLPLSFFDKA-KSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLS 151 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhCcC-CcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 7778888899999999999999999999999866 899999999999999999999886656657888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhHH
Q 000406 493 WKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKL 572 (1560)
Q Consensus 493 ~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k~ 572 (1560)
|.+++++++..|++.++..++.++.++..++.++..++..+.+.|.++|+++||+|+.++...+++.+..+...+...+.
T Consensus 152 ~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~ 231 (567)
T COG1132 152 WRLALILLLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRA 231 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888887778888888888899999999999999999999999999999999888887777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000406 573 GFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIIDR 652 (1560)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~~ 652 (1560)
....+...++..++..+..++++++|.+++..+.+++|.+.+++.+......++..+...+..+..+..+++|++++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~ 311 (567)
T COG1132 232 SRLEALLAPLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDE 311 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 77777777888888888889999999999999999999999999988888889999999999999999999999999997
Q ss_pred CCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEE
Q 000406 653 VPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLI 732 (1560)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I 732 (1560)
+++..+.+.. .....+.|+|+||+|+|++ +.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|
T Consensus 312 ~~~~~~~~~~---~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I 386 (567)
T COG1132 312 EPEVEDPPDP---LKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEI 386 (567)
T ss_pred CccccCCCCC---CCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeE
Confidence 5543221111 2234578999999999974 3569999999999999999999999999999999999999999999
Q ss_pred EECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCC
Q 000406 733 TLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQL 812 (1560)
Q Consensus 733 ~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~L 812 (1560)
++||+|+++++...+|++|++|||+|+||++||+|||.+|.+++++++++++|+.++++++|+++|+|+||.+|++|.+|
T Consensus 387 ~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~L 466 (567)
T COG1132 387 LIDGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNL 466 (567)
T ss_pred EECCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecC
Q 000406 813 SGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGN 892 (1560)
Q Consensus 813 SgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~ 892 (1560)
|||||||||||||++++|+|||||||||+||+++|+.+++.++++.++||+|+|+||++++++||+|+||++|+|+|.|+
T Consensus 467 SgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~ 546 (567)
T COG1132 467 SGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGT 546 (567)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecC
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred hhhHhhhcchHHHHHHHHH
Q 000406 893 HRQLLERGGAYHDLVKLAS 911 (1560)
Q Consensus 893 ~~~l~~~~~~~~~l~~~~~ 911 (1560)
|+||++++|.|+++++.+.
T Consensus 547 h~eLl~~~g~y~~l~~~~~ 565 (567)
T COG1132 547 HEELLAKGGLYARLYQAQG 565 (567)
T ss_pred HHHHHHcCCHHHHHHHHhh
Confidence 9999999999999997653
No 28
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.2e-77 Score=771.86 Aligned_cols=565 Identities=25% Similarity=0.308 Sum_probs=470.3
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 981 EIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGW 1060 (1560)
Q Consensus 981 ~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1060 (1560)
++..+.++.++.++..+++.++...+....|++++.+++.......... .....+.++++++.++..++.++..++...
T Consensus 13 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (592)
T PRK10790 13 RLLAYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPL-GLVAGLAAAYVGLQLLAAGLHYAQSLLFNR 91 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555666667777777777777777888888888776543211111 001112222333444556677778888888
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1061 AGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTL 1140 (1560)
Q Consensus 1061 ~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~l 1140 (1560)
++.++..++|..+|+++++.|+.+|+ +.+.|++++|+++|++.+++.+...+..++.+++.+++.++++++++|.+++
T Consensus 92 ~~~~~~~~lr~~l~~~l~~~~~~~~~--~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 169 (592)
T PRK10790 92 AAVGVVQQLRTDVMDAALRQPLSAFD--TQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMAL 169 (592)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhC--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999987 7899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhc-chhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 000406 1141 VAAALTPFTLGASYLSLIINV-GPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILG 1219 (1560)
Q Consensus 1141 v~l~~ipl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 1219 (1560)
++++++|+.++...+...... ..+..++...+..+.+.|.+.|+++||+|+.++.+.++|.+..++..+...+..+..+
T Consensus 170 i~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (592)
T PRK10790 170 VAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDG 249 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888876655444333222 2222245566778889999999999999999999999999998888777776666554
Q ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCcc
Q 000406 1220 LT-LGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLI 1298 (1560)
Q Consensus 1220 ~~-~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~ 1298 (1560)
.. ..+..++..+..+++.++++. +..|.+++|.++++..+...+..|+..+...+..+..+..+++|+.++++.+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~ 328 (592)
T PRK10790 250 FLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQ 328 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 43 223333333332333333333 6789999999999999999999999999999999999999999999998765432
Q ss_pred ccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCE
Q 000406 1299 DNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGV 1378 (1560)
Q Consensus 1299 ~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGv 1378 (1560)
.... .. ....+.|+|+||+|+|+. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+
T Consensus 329 ~~~~--~~-~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~ 403 (592)
T PRK10790 329 YGND--DR-PLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGR 403 (592)
T ss_pred CCCC--cc-CCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCE
Confidence 1111 11 122356999999999974 246999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1379 DLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1379 di~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
|+++++++.+|++|+||||||.||+|||||||++++ .+++++++++++.++++++|.++|+||||.+||+|.+||||||
T Consensus 404 ~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqr 482 (592)
T PRK10790 404 PLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQK 482 (592)
T ss_pred EhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHH
Confidence 999999999999999999999999999999999997 6899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLL 1538 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl 1538 (1560)
|||||||||+++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|+||+
T Consensus 483 QRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~ 562 (592)
T PRK10790 483 QLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLL 562 (592)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hhccChHHHHHHHHhhhhc
Q 000406 1539 ASHLNGVYASLVRAETEAN 1557 (1560)
Q Consensus 1539 ~~~~~g~y~~l~~~q~~~~ 1557 (1560)
+ +++.|+++++.|...+
T Consensus 563 ~--~~~~y~~l~~~~~~~~ 579 (592)
T PRK10790 563 A--AQGRYWQMYQLQLAGE 579 (592)
T ss_pred h--CCCHHHHHHHHHhhhc
Confidence 8 5799999999885443
No 29
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.2e-77 Score=783.52 Aligned_cols=566 Identities=30% Similarity=0.397 Sum_probs=495.6
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 979 LSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFC 1058 (1560)
Q Consensus 979 ~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 1058 (1560)
+.+++.+.++.+..+...++++++..++....|+++..+++..+.... ......+.+.++++.++..++.+++.++.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~---~~~l~~l~~~~~~~~~~~~~~~~l~~~~~ 203 (694)
T TIGR01846 127 FSWFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG---LSTLSVLALAMLAVAIFEPALGGLRTYLF 203 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666666677777777777777777777788888887776553211 12223344445555566777888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1059 GWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRL 1138 (1560)
Q Consensus 1059 ~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l 1138 (1560)
...+.++..++|..+|++++++|+.||+ ++++|++++|+ +|++.+++++...+..++.+++++++.++++++++|.+
T Consensus 204 ~~~~~~~~~~l~~~~~~~l~~l~~~~f~--~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 280 (694)
T TIGR01846 204 AHLTSRIDVELGARLYRHLLGLPLGYFE--SRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTL 280 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHcC--CCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999987 79999999999 69999999999999888888888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHH
Q 000406 1139 TLVAAALTPFTLGASYLSL-IINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQI 1217 (1560)
Q Consensus 1139 ~lv~l~~ipl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~ 1217 (1560)
++++++++|+++++.++.. ......+...+...+..+.+.|++.|+++||+++.|+.+.++|++..++..+...+..+.
T Consensus 281 ~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 360 (694)
T TIGR01846 281 TGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNL 360 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888887776555433 333333333556677889999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCc
Q 000406 1218 LGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPL 1297 (1560)
Q Consensus 1218 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~ 1297 (1560)
......+...+..+..++++|+|++++..|.+++|.++++.++...+..|+..+...+..+..+..+++|+.++++.+++
T Consensus 361 ~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e 440 (694)
T TIGR01846 361 GNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTE 440 (694)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 88888888888888899999999999999999999999999999999999999999999999999999999999987654
Q ss_pred cccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECC
Q 000406 1298 IDNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEG 1377 (1560)
Q Consensus 1298 ~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdG 1377 (1560)
.+...... .....+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||
T Consensus 441 ~~~~~~~~-~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg 518 (694)
T TIGR01846 441 PRSAGLAA-LPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDG 518 (694)
T ss_pred ccCCCCCC-CCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 33211111 11224579999999999743 34699999999999999999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHH
Q 000406 1378 VDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQ 1457 (1560)
Q Consensus 1378 vdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQ 1457 (1560)
+|+++++.+++|++|+||||||++|+|||||||++++|++++++++++++.+++++++.++|+||||.++++|.+|||||
T Consensus 519 ~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq 598 (694)
T TIGR01846 519 VDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQ 598 (694)
T ss_pred EehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHH
Confidence 99999999999999999999999999999999999989999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHH
Q 000406 1458 KQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1458 rQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||||||||||+++|+|||||||||+||++||+.+.+.|++..+++|+|+||||++++..||+|++|++|+|+|.|+|+||
T Consensus 599 ~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l 678 (694)
T TIGR01846 599 RQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEEL 678 (694)
T ss_pred HHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred HhhccChHHHHHHHHhh
Q 000406 1538 LASHLNGVYASLVRAET 1554 (1560)
Q Consensus 1538 l~~~~~g~y~~l~~~q~ 1554 (1560)
++ ++|.|++|++.|.
T Consensus 679 ~~--~~~~y~~l~~~~~ 693 (694)
T TIGR01846 679 LA--LQGLYARLWQQQS 693 (694)
T ss_pred HH--cCChHHHHHHhhc
Confidence 98 5799999998763
No 30
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.4e-78 Score=706.51 Aligned_cols=510 Identities=26% Similarity=0.323 Sum_probs=441.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHH
Q 000406 1036 LSLALVGLGFGCIIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFS 1115 (1560)
Q Consensus 1036 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~ 1115 (1560)
....+=++++...+..++.....+.+..++..++|.++|+++...++.-.. +...|+++||+..|++.+++.+-..+.
T Consensus 60 p~a~VR~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~--r~r~gdLL~RLvaDVd~Ld~lyLRvi~ 137 (573)
T COG4987 60 PSAGVRGLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLL--RYRSGDLLNRLVADVDALDNLYLRVIA 137 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHH--hcChHhHHHHHHhhHHHHhhHHHHHHh
Confidence 344455567888888999999999999999999999999999999888654 679999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcchhhh-hhhHHHHHHHHHHHhcchhHHHhccch
Q 000406 1116 VLLMGLSSAAVGLGVSLVLNWRLTLVAAALTP-FTLGASYLSLIINVGPKID-NSSYAKASSIASGAVSNIRTVTTFSAQ 1193 (1560)
Q Consensus 1116 ~~l~~~~~~i~~l~~~~~~~~~l~lv~l~~ip-l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~l~gi~tIraf~~e 1193 (1560)
+.+..+....+..+.+.+++|.+++.+..++. +.+++.+++.+..+..... ........+.+.+.+.|....+.||++
T Consensus 138 P~~~a~~~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~ 217 (573)
T COG4987 138 PAVVALVLIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAE 217 (573)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccH
Confidence 99999888888888888889988877655444 3334455555444433333 556677889999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHH-
Q 000406 1194 EQIINSFDKALSEPKKKSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLA- 1272 (1560)
Q Consensus 1194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~- 1272 (1560)
+.+.+.+.+..+.+.+...+.+++..+...+.+++..+..+..+.+.+..+..|..+......+.+.......++..+.
T Consensus 218 ~~~~~~l~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~ 297 (573)
T COG4987 218 DAYRTALEATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAP 297 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcc
Confidence 9999999999999999999988888888888777776666644444445566677665444444444445555666666
Q ss_pred hhHHHHHHHHHHHHHHHHHhccCCccccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCC
Q 000406 1273 GLAPDTSMAATAIPAVLQITKRKPLIDNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSG 1352 (1560)
Q Consensus 1273 ~~~~~~~~~~~s~~ri~~i~~~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SG 1352 (1560)
..+.+..+...++.|+.++.+.+++...+ ..+.+.. +..++++||+|+|+++ .+++|+|+||++++||||||+||||
T Consensus 298 ~A~~~lgq~~~Sa~Rl~~i~~q~~e~~~~-~~~~~~~-~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SG 374 (573)
T COG4987 298 GAFQHLGQVIASARRLNDILDQKPEVTFP-DEQTATT-GQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSG 374 (573)
T ss_pred hhHHHhhHHHHHHHHHhhhccCCcccCCC-ccccCCc-cceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCC
Confidence 77788999999999999999887765443 1212222 2279999999999875 4579999999999999999999999
Q ss_pred CCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHH
Q 000406 1353 SGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIH 1432 (1560)
Q Consensus 1353 SGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~ 1432 (1560)
||||||+++|.|.|+|++|+|.++|+|++.++.+.+|+.|++++|.++||++|+|+||.+++|+++|||+|+++++++|+
T Consensus 375 sGKSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~ 454 (573)
T COG4987 375 SGKSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLE 454 (573)
T ss_pred CCHHHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChH
Q 000406 1433 KFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLS 1512 (1560)
Q Consensus 1433 ~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRls 1512 (1560)
+++.+.|+||+|.+||+|.+|||||||||+|||+||+++|++||||||.+||++||++|.+.|.+..+|+|+|+||||+.
T Consensus 455 ~l~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~ 534 (573)
T COG4987 455 KLLESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLR 534 (573)
T ss_pred HHHHhChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCEEEEEeCCEEEEecCHHHHHhhccChHHHHHHHH
Q 000406 1513 TIREANMIAVVRDGAVVEYGSHETLLASHLNGVYASLVRA 1552 (1560)
Q Consensus 1513 ti~~aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~~l~~~ 1552 (1560)
.+..||||+|||+|+++|+|+|++|++ ++|.|++|++.
T Consensus 535 ~le~~drIivl~~Gkiie~G~~~~Ll~--~~g~~~~l~q~ 572 (573)
T COG4987 535 GLERMDRIIVLDNGKIIEEGTHAELLA--NNGRYKRLYQL 572 (573)
T ss_pred cHhhcCEEEEEECCeeeecCCHHhhhc--cccHHHHHhcc
Confidence 999999999999999999999999998 68999999763
No 31
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=3.2e-77 Score=779.23 Aligned_cols=564 Identities=26% Similarity=0.334 Sum_probs=496.4
Q ss_pred ccHHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000406 330 VGLFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGA 409 (1560)
Q Consensus 330 ~~~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 409 (1560)
.++..++++..+..++.++..++++++..++....+++++.++|.+.... + ...+..+++.++++.++..++.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~---~----~~~l~~~~~~~~~~~~~~~~~~ 193 (686)
T TIGR03797 121 LGLRDLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDA---D----RSLLVQIALALLAAAVGAAAFQ 193 (686)
T ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC---C----hhHHHHHHHHHHHHHHHHHHHH
Confidence 34666777743344555566666777777777778889999998876322 1 1122234445555566667788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 410 YLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGF 489 (1560)
Q Consensus 410 ~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~ 489 (1560)
+++.++...++.++..++|..++++++++|+.||+.. ++|++++|++ |++.+++.+...+...+.+++.+++.+++++
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~ll~~~~~~~~~~-~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 271 (686)
T TIGR03797 194 LAQSLAVLRLETRMDASLQAAVWDRLLRLPVSFFRQY-STGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMF 271 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHCCC-ChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888899999999999999999999999999765 8999999997 7999999999988888888888888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHH
Q 000406 490 LRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFG 569 (1560)
Q Consensus 490 ~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~ 569 (1560)
.++|.+++++++++|+++++..++.+...+..++..+...+..+.+.|+++|+++||+++.|+.+.++|.+..++..+..
T Consensus 272 ~~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~ 351 (686)
T TIGR03797 272 YYSWKLALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLE 351 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888888888888888888888889999999999999999999999999999999999888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 570 AKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEI 649 (1560)
Q Consensus 570 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~ 649 (1560)
.+..........+..++..+..++++|+|++++.+|.+|+|.++++..+...+..++..+...+..+.++..+++|+.++
T Consensus 352 ~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~ 431 (686)
T TIGR03797 352 LSAQRIENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPI 431 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888777777777777778888889999999999999999999999888888899999999999999999999999999
Q ss_pred HccCCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCc
Q 000406 650 IDRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTK 729 (1560)
Q Consensus 650 l~~~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~ 729 (1560)
++.+++.+. .........+.|+++||+|+|+.. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++
T Consensus 432 l~~~~e~~~---~~~~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~ 507 (686)
T TIGR03797 432 LEALPEVDE---AKTDPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPES 507 (686)
T ss_pred hcCCccccc---CcCCCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCC
Confidence 986544221 111112235789999999999743 3569999999999999999999999999999999999999999
Q ss_pred cEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCC
Q 000406 730 GLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRG 809 (1560)
Q Consensus 730 G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g 809 (1560)
|+|++||+|+++++.+.+|++|+||||+|++|++||+|||.++.+ .++++++++|+.++++++++++|+|+||.+|++|
T Consensus 508 G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G 586 (686)
T TIGR03797 508 GSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGG 586 (686)
T ss_pred CEEEECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCC
Confidence 999999999999999999999999999999999999999999988 7899999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEE
Q 000406 810 TQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVE 889 (1560)
Q Consensus 810 ~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~ 889 (1560)
.+|||||||||+|||||+++|+|||||||||+||+++++.+.+.|+++ ++|+|+||||++.+..||+|+||++|+|++
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~ 664 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQ 664 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEE
Confidence 999999999999999999999999999999999999999999999886 589999999999999999999999999999
Q ss_pred ecChhhHhhhcchHHHHHHH
Q 000406 890 IGNHRQLLERGGAYHDLVKL 909 (1560)
Q Consensus 890 ~G~~~~l~~~~~~~~~l~~~ 909 (1560)
.|+|+|++++++.|++++..
T Consensus 665 ~G~~~~Ll~~~~~y~~l~~~ 684 (686)
T TIGR03797 665 QGTYDELMAREGLFAQLARR 684 (686)
T ss_pred ECCHHHHHhCCcHHHHHHHh
Confidence 99999999999999998763
No 32
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.8e-78 Score=788.83 Aligned_cols=572 Identities=22% Similarity=0.304 Sum_probs=483.8
Q ss_pred ccCcccHHHHHHHhhh-hhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHH
Q 000406 326 VAKPVGLFSLFKYSTK-LDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAI 404 (1560)
Q Consensus 326 ~~~~~~~~~l~~y~~~-~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 404 (1560)
+.+.+++..+.+|.+. ..++..++.+++.++..++.....+|+..|.+.-...... ......++++|++++++
T Consensus 797 ~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~------~~~~~~~~~vY~~l~~~ 870 (1381)
T KOG0054|consen 797 ETGKVSWSVYKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTT------TVSTSFYLGVYALLGVA 870 (1381)
T ss_pred hcCEeeHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc------CCCcchHHHHHHHHHHH
Confidence 5577888888888876 3344344445566666666666666666665542211100 01234578889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 405 VMMGAYLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICG 484 (1560)
Q Consensus 405 ~~~~~~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~ 484 (1560)
..++..++.+.+...+.+++.+||+++++++++.||+|||++ |+|+|+|||++|++.+|..+|..+..++..++.+++.
T Consensus 871 ~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdtT-P~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~ 949 (1381)
T KOG0054|consen 871 SSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDTT-PTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGI 949 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCCC-CccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999876 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHh
Q 000406 485 YTVGFLRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLAD 564 (1560)
Q Consensus 485 ~ii~~~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~ 564 (1560)
++++.+..|++.++++.+..+++.++.+|.+..+.+.+.....+++..+|+.|+++|+.|||+|+.+++|.+++....+.
T Consensus 950 ~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~ 1029 (1381)
T KOG0054|consen 950 LVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDE 1029 (1381)
T ss_pred HHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 565 SIPFGAKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAAT 644 (1560)
Q Consensus 565 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~ 644 (1560)
..+...-.....-+...-+.++..+..+++..+. .+...+.+++|.+..++.+.+.+...++..++...++++.++|++
T Consensus 1030 ~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~-vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVE 1108 (1381)
T KOG0054|consen 1030 NSRAFFLSISANRWLAVRLELLGNLVVLIAALFA-VLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVE 1108 (1381)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhh
Confidence 7643322211111111111222111111111111 111222267899999999999999999999999999999999999
Q ss_pred HHHHHHccCCCCCCCCCC---CCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHH
Q 000406 645 RVFEIIDRVPEIDPYNSE---GRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALI 721 (1560)
Q Consensus 645 Ri~~~l~~~~~~~~~~~~---~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll 721 (1560)
||.++.+.++| .+...+ +++.+|..|.|+|+|++.+|... .++|||||||+|+|||+|||||++|||||||+++|
T Consensus 1109 Rv~eY~~~~~E-~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aL 1186 (1381)
T KOG0054|consen 1109 RVLEYTDIPSE-APLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILAL 1186 (1381)
T ss_pred HHHHHhcCCCC-CCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHH
Confidence 99999997665 332221 23445778999999999999743 46799999999999999999999999999999999
Q ss_pred hcCCCCCccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCC
Q 000406 722 ERFYDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGY 801 (1560)
Q Consensus 722 ~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl 801 (1560)
.|+.+|.+|+|.|||.||.++++..||++++++||||.||+||||.||.+.. +.+|+++|+|++.+++.++++++|.|+
T Consensus 1187 FRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf~-e~sD~~IW~ALe~~~Lk~~v~~~p~~L 1265 (1381)
T KOG0054|consen 1187 FRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPFD-EYSDDEIWEALERCQLKDVVSSLPGGL 1265 (1381)
T ss_pred HHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCccc-ccCHHHHHHHHHHhChHHHHhhCCcCC
Confidence 9999999999999999999999999999999999999999999999998765 468999999999999999999999999
Q ss_pred CcccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEE
Q 000406 802 DTQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVV 881 (1560)
Q Consensus 802 ~t~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~v 881 (1560)
|+.+.|+|.|+|-||||.+||||||+++++||+|||+||++|++|+..||+.|++.+++||||.|+||++++.+||||+|
T Consensus 1266 d~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlV 1345 (1381)
T KOG0054|consen 1266 DSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLV 1345 (1381)
T ss_pred CceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCeEEEecChhhHhhh-cchHHHHHH
Q 000406 882 LDQGSVVEIGNHRQLLER-GGAYHDLVK 908 (1560)
Q Consensus 882 l~~G~iv~~G~~~~l~~~-~~~~~~l~~ 908 (1560)
||+|+|+|.|+|.+|+++ ++.|+++..
T Consensus 1346 ld~G~v~EfdsP~~Ll~~~~S~f~~~l~ 1373 (1381)
T KOG0054|consen 1346 LDAGRVVEFDSPAELLSDKDSLFSSLLK 1373 (1381)
T ss_pred eeCCeEeecCChHHHHhCCcchHHHHHH
Confidence 999999999999999976 566765544
No 33
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.2e-76 Score=776.22 Aligned_cols=565 Identities=26% Similarity=0.397 Sum_probs=492.4
Q ss_pred ccHHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000406 330 VGLFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGA 409 (1560)
Q Consensus 330 ~~~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 409 (1560)
..+..++++.++.. ..++..++++++..++....+++++.++|.+..... ...+..+++.++++.++..++.
T Consensus 142 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~-------~~~l~~~~~~~~~~~~~~~~~~ 213 (708)
T TIGR01193 142 NSLLKFIPLITRQK-KLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM-------MGTLGIISIGLIIAYIIQQILS 213 (708)
T ss_pred chHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-------hHHHHHHHHHHHHHHHHHHHHH
Confidence 34556777666543 344555666666667677778899999998764221 1122223344444555666777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 410 YLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGF 489 (1560)
Q Consensus 410 ~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~ 489 (1560)
+++.++..+++.++..++|.+++++++++|+.||+.. ++|++++|++ |++.+.+.+...+..++.+++.+++.+++++
T Consensus 214 ~~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~f~~~-~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 291 (708)
T TIGR01193 214 YIQIFLLNVLGQRLSIDIILSYIKHLFELPMSFFSTR-RTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLV 291 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-chhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888899999999999999999999999999765 8999999997 8999999999888888888888888888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHH
Q 000406 490 LRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFG 569 (1560)
Q Consensus 490 ~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~ 569 (1560)
+++|.+++++++++|+++++..++.+..++..++..+...+..+.+.|+++|+++||++++|+.+.++|.+..++..+..
T Consensus 292 ~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~ 371 (708)
T TIGR01193 292 RQNMLLFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKS 371 (708)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999988888888888888888888899999999999999999999999999999999988887777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 570 AKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEI 649 (1560)
Q Consensus 570 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~ 649 (1560)
.+..........+..++..+..++++|+|++++.+|.+|+|.++++..+...+..|+..+...+..+..+..+++|+.++
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~ 451 (708)
T TIGR01193 372 FKYQKADQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEV 451 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777666666666666667778888999999999999999999999888888899999999999999999999999999
Q ss_pred HccCCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCc
Q 000406 650 IDRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTK 729 (1560)
Q Consensus 650 l~~~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~ 729 (1560)
++.+++.+.. ......+...+.|+++||+|+|+. ++++|+|+||+|++||++||+|+||||||||+++|+|+|+|++
T Consensus 452 l~~~~e~~~~-~~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~ 528 (708)
T TIGR01193 452 YLVDSEFINK-KKRTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARS 528 (708)
T ss_pred HcCCCccccc-ccccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCC
Confidence 9865543221 110112234578999999999973 3469999999999999999999999999999999999999999
Q ss_pred cEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcC-CCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCC
Q 000406 730 GLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMG-KENATMKEAVAACKAASAHSFISELPLGYDTQVGDR 808 (1560)
Q Consensus 730 G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g-~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~ 808 (1560)
|+|++||+|+++++.+.+|++|+||||+|+||++||+|||.++ .++.++++++++|+.+++++++.++|.|+||.+|++
T Consensus 529 G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~ 608 (708)
T TIGR01193 529 GEILLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEE 608 (708)
T ss_pred cEEEECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCC
Confidence 9999999999999999999999999999999999999999998 467889999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEE
Q 000406 809 GTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVV 888 (1560)
Q Consensus 809 g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv 888 (1560)
|.+|||||||||+||||++++|+|||||||||+||+++++.+.+.|++. +++|+|+||||++.+..||+|++|++|+++
T Consensus 609 G~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~ 687 (708)
T TIGR01193 609 GSSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKII 687 (708)
T ss_pred CCCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEE
Confidence 9999999999999999999999999999999999999999999999885 689999999999999999999999999999
Q ss_pred EecChhhHhhhcchHHHHHH
Q 000406 889 EIGNHRQLLERGGAYHDLVK 908 (1560)
Q Consensus 889 ~~G~~~~l~~~~~~~~~l~~ 908 (1560)
+.|+|+|++++++.|+++++
T Consensus 688 ~~G~~~~L~~~~~~y~~l~~ 707 (708)
T TIGR01193 688 EQGSHDELLDRNGFYASLIH 707 (708)
T ss_pred EECCHHHHHhcCCcHHHHhh
Confidence 99999999998999998864
No 34
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2e-76 Score=775.21 Aligned_cols=564 Identities=25% Similarity=0.353 Sum_probs=490.8
Q ss_pred cHHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000406 331 GLFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAY 410 (1560)
Q Consensus 331 ~~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 410 (1560)
.+..++++.++. +..++..++++++..++....+++.+.++|....... ...+..+++.++++.++..++.+
T Consensus 141 ~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~ 212 (710)
T TIGR03796 141 LLRALWRRLRGS-RGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGR-------QDWLRPLLLGMGLTALLQGVLTW 212 (710)
T ss_pred cHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-------hhHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555443 3334455555566666666677889999987664221 01122234444455566677788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 411 LEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFL 490 (1560)
Q Consensus 411 l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~ 490 (1560)
++.++...++.++..++|.+++++++++|+++|+.. ++|++++|++.| +.+++++...+..++.+++.+++.+++++.
T Consensus 213 ~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~~~~~-~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 290 (710)
T TIGR03796 213 LQLYYLRRLQIKLAVGMSARFLWHILRLPVRFFAQR-HAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLL 290 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCC-cccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888899999999999999999999999999765 899999999988 789999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHh
Q 000406 491 RSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGA 570 (1560)
Q Consensus 491 ~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~ 570 (1560)
++|++++++++++|+.+++..++.+...+..++..+...+..+.+.|.++|+++||++++|+.+.++|.+...+..+...
T Consensus 291 ~~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 370 (710)
T TIGR03796 291 YDPVLTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQ 370 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888888888888888888888899999999999999999999999999999999888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 571 KLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEII 650 (1560)
Q Consensus 571 k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l 650 (1560)
+..........+..++..+..++++|+|++++.+|.+++|.++++..+...+..++..+...+..+.++..+++|+.+++
T Consensus 371 ~~~~~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il 450 (710)
T TIGR03796 371 ELGVLTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVL 450 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777777778888899999999999999999999998888888999999999999999999999999999
Q ss_pred ccCCCCCCCCC---C-CCcC-CCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCC
Q 000406 651 DRVPEIDPYNS---E-GRKL-SSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFY 725 (1560)
Q Consensus 651 ~~~~~~~~~~~---~-~~~~-~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~ 725 (1560)
+.+++.+.... . .... +...+.|+++||+|+|+.. ++++|+|+||+|++||++||||+||||||||+++|+|+|
T Consensus 451 ~~~~e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~ 529 (710)
T TIGR03796 451 RNPVDPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLY 529 (710)
T ss_pred cCCCccccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCC
Confidence 87554321110 0 0111 2335789999999999853 356999999999999999999999999999999999999
Q ss_pred CCCccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCccc
Q 000406 726 DPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQV 805 (1560)
Q Consensus 726 ~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~ 805 (1560)
+|++|+|.+||+|+++++...+|++|+||||+|++|++||+|||.++.++.++++++++|+.+++++++.++|+|++|.+
T Consensus 530 ~p~~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i 609 (710)
T TIGR03796 530 QPWSGEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAEL 609 (710)
T ss_pred CCCCcEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCccccee
Confidence 99999999999999999999999999999999999999999999999888899999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCC
Q 000406 806 GDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQG 885 (1560)
Q Consensus 806 ~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G 885 (1560)
|++|.+|||||||||+|||||+++|+|||||||||+||+++++.+.+.|++ .++|+|+||||++++..||+|++|++|
T Consensus 610 ~e~G~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G 687 (710)
T TIGR03796 610 AEGGANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERG 687 (710)
T ss_pred ccCCCCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999999999986 589999999999999999999999999
Q ss_pred eEEEecChhhHhhhcchHHHHH
Q 000406 886 SVVEIGNHRQLLERGGAYHDLV 907 (1560)
Q Consensus 886 ~iv~~G~~~~l~~~~~~~~~l~ 907 (1560)
+|++.|+|+||+++++.|++++
T Consensus 688 ~i~~~G~~~~Ll~~~~~y~~l~ 709 (710)
T TIGR03796 688 KVVQRGTHEELWAVGGAYARLI 709 (710)
T ss_pred EEEEecCHHHHHHcCCcHHHHh
Confidence 9999999999999999998876
No 35
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.9e-76 Score=758.91 Aligned_cols=563 Identities=32% Similarity=0.469 Sum_probs=496.4
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 981 EIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGW 1060 (1560)
Q Consensus 981 ~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1060 (1560)
.++++.++.++.++++++++++..++....|+++..+++..+... .......+.+.++++.++..++.++..++...
T Consensus 4 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (571)
T TIGR02203 4 RLWSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGR---DRSVLWWVPLVVIGLAVLRGICSFVSTYLLSW 80 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC---chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666667777777788888888787888888877776554321 11122333444556666777788888889999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1061 AGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTL 1140 (1560)
Q Consensus 1061 ~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~l 1140 (1560)
.+.++...+|..+++++++.|..+|+ +.+.|++++|++.|++.+++++...+..++.+++.++++++++++++|.+++
T Consensus 81 ~~~~~~~~lr~~l~~~~~~~~~~~~~--~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~ 158 (571)
T TIGR02203 81 VSNKVVRDIRVRMFEKLLGLPVSFFD--RQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTL 158 (571)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhC--CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999986 6889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 000406 1141 VAAALTPFTLGASYLSLI-INVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILG 1219 (1560)
Q Consensus 1141 v~l~~ipl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 1219 (1560)
++++++|+.++..++... .....+...+...+..+.+.|.++|+++||+++.++.+.++|++..++..+...+..+...
T Consensus 159 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (571)
T TIGR02203 159 IVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGS 238 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888887766554433 3333333456677888999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCccc
Q 000406 1220 LTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLID 1299 (1560)
Q Consensus 1220 ~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~~ 1299 (1560)
....+...+..+..++++++|++++..|.+++|.++++..+...+..|+..+...+..+..+..+.+|+.++++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~ 318 (571)
T TIGR02203 239 ISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKD 318 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 88888888888888999999999999999999999999999999999999999999999999999999999987655432
Q ss_pred cccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEe
Q 000406 1300 NVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVD 1379 (1560)
Q Consensus 1300 ~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvd 1379 (1560)
..... . ....+.|+++||+|+|++. +.++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|++||+|
T Consensus 319 ~~~~~-~-~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~ 395 (571)
T TIGR02203 319 TGTRA-I-ERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHD 395 (571)
T ss_pred CCCCC-C-CCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEe
Confidence 21111 1 1123469999999999754 3579999999999999999999999999999999999999999999999999
Q ss_pred cCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCC-CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1380 LREINVKWLRKQTALVGQEPALFAGTIRDNIALGNP-KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1380 i~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~-~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
+++++.+++|++++||||||+||+|||||||.++++ +.++++++++++.+++++++.++|+||||+|||+|.+||||||
T Consensus 396 i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqr 475 (571)
T TIGR02203 396 LADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQR 475 (571)
T ss_pred HHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHH
Confidence 999999999999999999999999999999999986 7999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLL 1538 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl 1538 (1560)
||||||||++++|+|||||||||+||.+|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|+
T Consensus 476 QRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~ 555 (571)
T TIGR02203 476 QRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELL 555 (571)
T ss_pred HHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hhccChHHHHHHHHh
Q 000406 1539 ASHLNGVYASLVRAE 1553 (1560)
Q Consensus 1539 ~~~~~g~y~~l~~~q 1553 (1560)
+ .++.|++++..+
T Consensus 556 ~--~~~~~~~~~~~~ 568 (571)
T TIGR02203 556 A--RNGLYAQLHNMQ 568 (571)
T ss_pred H--cCCHHHHHHHHh
Confidence 8 468999998866
No 36
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-77 Score=701.81 Aligned_cols=543 Identities=28% Similarity=0.376 Sum_probs=456.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhccch-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Q 000406 1004 GAILSIFPLILGQALQVYFDDTAS-TLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEP 1082 (1560)
Q Consensus 1004 ~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~ 1082 (1560)
..+....|.++...++..-+.... .........+..|....++..++..++...+.++.+++..+....+|++++++..
T Consensus 43 K~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~ 122 (591)
T KOG0057|consen 43 KILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDL 122 (591)
T ss_pred hHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH
Confidence 445556677777666655321111 1122233455667777788889999999999999999999999999999999999
Q ss_pred CCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000406 1083 GWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLV-LNWRLTLVAAALTPFTLGASYLSLIINV 1161 (1560)
Q Consensus 1083 ~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~-~~~~l~lv~l~~ipl~~~~~~~~~~~~~ 1161 (1560)
+||- ...+|.+.+.+.+-...+...+...+..++..++.+.+..+.+.+ +.+.++++.+..+..+..+.+.....+-
T Consensus 123 ~~~~--~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn 200 (591)
T KOG0057|consen 123 SFFL--SRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRN 200 (591)
T ss_pred Hhhc--CCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHH
Confidence 9976 688999999888888888877777777766666555544433332 4455555544444443333333333322
Q ss_pred chh-hhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1162 GPK-IDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILGLTLGFSQGAMYVAYTFTLWFG 1240 (1560)
Q Consensus 1162 ~~~-~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 1240 (1560)
..+ ....+...+.+.+.+++.+-++||.||.|+...++|+..+.++.+...+..++.++....-..++.+..+.+..++
T Consensus 201 ~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~ 280 (591)
T KOG0057|consen 201 RFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMVLG 280 (591)
T ss_pred HHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 222 3366777788899999999999999999999999999999999999999999988888777777777788888888
Q ss_pred HHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCccccccccccCCCCCccEEEEEEE
Q 000406 1241 AYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLIDNVKGRKLERSKPLGIELKMVT 1320 (1560)
Q Consensus 1241 ~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~~~~~~~~~~~~~~~~I~~~nVs 1320 (1560)
..-+..|.+++|.+..+..++.....++..+...+.++.++.+-+..++...+......+. ..+....++.|+|+||+
T Consensus 281 ~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~~--~~~i~~~~~~I~F~dV~ 358 (591)
T KOG0057|consen 281 SNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQEA--ALPIELFGGSIEFDDVH 358 (591)
T ss_pred hhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhhc--cCCcccCCCcEEEEeeE
Confidence 8888999999999999999999999999999999999999988888887765433222211 11222235679999999
Q ss_pred EEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceEEEcCCCC
Q 000406 1321 FTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEPA 1400 (1560)
Q Consensus 1321 f~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~ 1400 (1560)
|.|++ ++++|+++||+|++||||||||+|||||||++++|+||++ ++|+|+|||+|+++++++.+|+.|||||||..
T Consensus 359 f~y~~--k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~ 435 (591)
T KOG0057|consen 359 FSYGP--KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSV 435 (591)
T ss_pred EEeCC--CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCccc
Confidence 99973 4569999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred CCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCC
Q 000406 1401 LFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEAS 1480 (1560)
Q Consensus 1401 LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaT 1480 (1560)
||++||.+||.+|+|.++++|+.++||++++||.|.++|+||+|.|||+|..||||||||++||||+||+|||++|||||
T Consensus 436 LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaT 515 (591)
T KOG0057|consen 436 LFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEAT 515 (591)
T ss_pred ccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHhhccChHHHHHHHHhhh
Q 000406 1481 SALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLASHLNGVYASLVRAETE 1555 (1560)
Q Consensus 1481 SaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~~l~~~q~~ 1555 (1560)
|+||.+||+.|.+.|+....++|+|+|+||++++++||+|++|++|+|+|.|+|+||++ +.+.|+++|..|..
T Consensus 516 S~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~--~s~~~~~~w~~~~~ 588 (591)
T KOG0057|consen 516 SALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA--PSELYADLWTTQTS 588 (591)
T ss_pred cccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhh--hhhHHHHHhccccc
Confidence 99999999999999999889999999999999999999999999999999999999998 68999999988854
No 37
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-79 Score=697.66 Aligned_cols=500 Identities=29% Similarity=0.394 Sum_probs=422.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1048 IIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVG 1127 (1560)
Q Consensus 1048 ~~~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~ 1127 (1560)
.++..++.++...+.+-..+++...+|+|+..++..|.- .+.+|+++.-+.+....+. ++.....++...++-.+++
T Consensus 273 G~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL--~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va 349 (790)
T KOG0056|consen 273 GFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHL--NRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVA 349 (790)
T ss_pred cchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeee--cccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhh
Confidence 344445555545567778889999999999999999964 6889998887766655544 3333333333333333333
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-hhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHh
Q 000406 1128 LGV-SLVLNWRLTLVAAALTPFTLGASYLSLIINVGP-KIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALS 1205 (1560)
Q Consensus 1128 l~~-~~~~~~~l~lv~l~~ipl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~ 1205 (1560)
++. ...++|+++++++++..+.+.........+... ++...+..+......+++-+.+|+|-|++|++..++|+++..
T Consensus 350 ~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil 429 (790)
T KOG0056|consen 350 MVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAIL 429 (790)
T ss_pred hhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHH
Confidence 333 234689999888777666554332221111111 122334445556677899999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 000406 1206 EPKKKSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAI 1285 (1560)
Q Consensus 1206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~ 1285 (1560)
++++..++...-..+....-..+..+...+-..+.+++|..+..++|+++.+..++.....|+.....++..++.....+
T Consensus 430 ~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDm 509 (790)
T KOG0056|consen 430 KYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDM 509 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhH
Confidence 99998888777666666666666666666666777888889999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCccccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcc
Q 000406 1286 PAVLQITKRKPLIDNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRF 1365 (1560)
Q Consensus 1286 ~ri~~i~~~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl 1365 (1560)
|+++++++++++..+.++..+-....|.|+|+||+|.|. +++++|+||||++.||+++|+|||||+||||++++|+||
T Consensus 510 Enmfdllkee~eVvd~P~a~pl~~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRf 587 (790)
T KOG0056|consen 510 ENMFDLLKEEPEVVDLPGAPPLKVTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRF 587 (790)
T ss_pred HHHHHHhhcCchhhcCCCCCCccccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHH
Confidence 999999998888766555444445578899999999996 457899999999999999999999999999999999999
Q ss_pred cCCCccEEEECCEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCcccc
Q 000406 1366 YDPNQGKVMIEGVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQ 1445 (1560)
Q Consensus 1366 ~~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~ 1445 (1560)
||.++|.|.|||+||+.+..+.||++||+||||..||+.||..||.+++|.+++||+.+|++.+++||-|..+|+||+|.
T Consensus 588 fdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~ 667 (790)
T KOG0056|consen 588 FDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTR 667 (790)
T ss_pred hhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeC
Q 000406 1446 VGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRD 1525 (1560)
Q Consensus 1446 Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~ 1525 (1560)
|||+|-.||||||||+||||++||+|.|++||||||+||..||++||.+|.++++++|.|+|||||+||-+||.|+|+++
T Consensus 668 VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~ 747 (790)
T KOG0056|consen 668 VGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISN 747 (790)
T ss_pred hhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEecCHHHHHhhccChHHHHHHHHh
Q 000406 1526 GAVVEYGSHETLLASHLNGVYASLVRAE 1553 (1560)
Q Consensus 1526 G~IvE~Gt~~eLl~~~~~g~y~~l~~~q 1553 (1560)
|+|+|.|+|+||+++ .+|.|++||+.|
T Consensus 748 G~IvErG~HeeLl~r-dgG~Ya~MWq~q 774 (790)
T KOG0056|consen 748 GRIVERGRHEELLKR-DGGAYADMWQAQ 774 (790)
T ss_pred CeEeecCcHHHHHhc-cCCcHHHHHHHH
Confidence 999999999999983 599999999665
No 38
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.8e-76 Score=818.88 Aligned_cols=569 Identities=21% Similarity=0.279 Sum_probs=473.3
Q ss_pred CcccHHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHH
Q 000406 328 KPVGLFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMM 407 (1560)
Q Consensus 328 ~~~~~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 407 (1560)
+.+++..++.|++...++..++.+++.++..++..+.++|++.|.+...... .. .....++++|++++++..+
T Consensus 948 g~v~~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~-~~------~~~~~~~~iy~~l~i~~~~ 1020 (1522)
T TIGR00957 948 GQVELSVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNG-TQ------NNTSLRLSVYGALGILQGF 1020 (1522)
T ss_pred CcccHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-CC------CCcchHHHHHHHHHHHHHH
Confidence 4455555555554433443334444444455555566667776665321100 00 1112345577777888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 408 GAYLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTV 487 (1560)
Q Consensus 408 ~~~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii 487 (1560)
+.++..+++.+.+.++..++|.+++++++++|+.|||.. ++|+++||+++|++.+++.++..+..++..++.+++.+++
T Consensus 1021 ~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~-~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~ 1099 (1522)
T TIGR00957 1021 AVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFERT-PSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIV 1099 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhccC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888889999999999999999999999999865 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhH
Q 000406 488 GFLRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIP 567 (1560)
Q Consensus 488 ~~~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~ 567 (1560)
+++.+|++++++++++++++++.++|.+..+.+.+......++..+++.|+++|+++||+|++|+.+.+++.+..+...+
T Consensus 1100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~ 1179 (1522)
T TIGR00957 1100 ILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQK 1179 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 99999988877777777788888888888888888888888999999999999999999999999999999988887766
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 568 FGAKLGFAKGAGMGVIYLVTYATWALAFWYGSILVA-RKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRV 646 (1560)
Q Consensus 568 ~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~-~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri 646 (1560)
..........+......++.. +++++.+.+.+. .+.+++|.+++++.+...+..++..+...+..++++++|++|+
T Consensus 1180 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi 1256 (1522)
T TIGR00957 1180 AYYPSIVANRWLAVRLECVGN---CIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERL 1256 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 554443333333333332222 233344444443 5789999999999888888899999999999999999999999
Q ss_pred HHHHccCCCCCCCCCCCCc--CCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcC
Q 000406 647 FEIIDRVPEIDPYNSEGRK--LSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERF 724 (1560)
Q Consensus 647 ~~~l~~~~~~~~~~~~~~~--~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~ 724 (1560)
.++++.+++.+........ ..+..|.|+|+||+|+|+.+. +++|+||||+|+|||++||||+||||||||+++|+|+
T Consensus 1257 ~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~-~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl 1335 (1522)
T TIGR00957 1257 KEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDL-DLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRI 1335 (1522)
T ss_pred HHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCC-cccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcC
Confidence 9999765543211011111 124568999999999997532 4699999999999999999999999999999999999
Q ss_pred CCCCccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcc
Q 000406 725 YDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQ 804 (1560)
Q Consensus 725 ~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~ 804 (1560)
++|++|+|+|||+|+++++.+.+|++|++|||||.||+|||||||.+.. ..++++++++++.++++++|.++|+||||.
T Consensus 1336 ~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~ 1414 (1522)
T TIGR00957 1336 NESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAHLKTFVSALPDKLDHE 1414 (1522)
T ss_pred ccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcCcHHHHhhCccCCCce
Confidence 9999999999999999999999999999999999999999999998543 578999999999999999999999999999
Q ss_pred cCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeC
Q 000406 805 VGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQ 884 (1560)
Q Consensus 805 ~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~ 884 (1560)
+|++|.+||||||||+||||||+++|+|||||||||+||+++++.|++.|++..+++|+|+||||++++.+||||+||++
T Consensus 1415 v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1415 CAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDK 1494 (1522)
T ss_pred ecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999899999999999999999999999999
Q ss_pred CeEEEecChhhHhhhcchHHHHHHH
Q 000406 885 GSVVEIGNHRQLLERGGAYHDLVKL 909 (1560)
Q Consensus 885 G~iv~~G~~~~l~~~~~~~~~l~~~ 909 (1560)
|+|+|.|+|+||+++++.|+++++.
T Consensus 1495 G~IvE~G~~~eLl~~~~~f~~l~~~ 1519 (1522)
T TIGR00957 1495 GEVAEFGAPSNLLQQRGIFYSMAKD 1519 (1522)
T ss_pred CEEEEECCHHHHHhCCCHHHHHHHH
Confidence 9999999999999988999998864
No 39
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1e-75 Score=752.68 Aligned_cols=562 Identities=30% Similarity=0.414 Sum_probs=474.7
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 980 SEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCG 1059 (1560)
Q Consensus 980 ~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1059 (1560)
++++++.++.+..+.+.+++.++..++....|+++..+++..... .....+.+.++++.++..+..+....+..
T Consensus 8 ~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (588)
T PRK13657 8 ARVLQYLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGK------GDIFPLLAAWAGFGLFNIIAGVLVARHAD 81 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------ccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666667777777777777777777888888777755432 11112222223333333333333444444
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1060 WAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLT 1139 (1560)
Q Consensus 1060 ~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~ 1139 (1560)
+...++...++..+|+++++.|+.+|+ +.+.|++++|+++|++.+.+.+...+..++..++..++.+++++.++|.++
T Consensus 82 ~~~~~~~~~l~~~l~~~l~~~~~~~~~--~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 159 (588)
T PRK13657 82 RLAHRRRLAVLTEYFERIIQLPLAWHS--QRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLS 159 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHHC--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555556666777999999999999987 789999999999999999998888888888888888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHH
Q 000406 1140 LVAAALTPFTLGASYLSL-IINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQIL 1218 (1560)
Q Consensus 1140 lv~l~~ipl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 1218 (1560)
+++++++|+.+++..+.. ......+.......+..+.+.|.++|+++||.|+.++.+.+++.+..++..+...+..++.
T Consensus 160 l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (588)
T PRK13657 160 LVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWW 239 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988888777665544333 2222222334566778899999999999999999999999999999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCcc
Q 000406 1219 GLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLI 1298 (1560)
Q Consensus 1219 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~ 1298 (1560)
.+...+.+++..+..++++++|++++..|.+++|.+++++.+...+..++..+...+..+..+..+++|+.++.+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~ 319 (588)
T PRK13657 240 ALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDV 319 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 88888888888888889999999999999999999999999999999999999999999999999999999998765432
Q ss_pred ccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCE
Q 000406 1299 DNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGV 1378 (1560)
Q Consensus 1299 ~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGv 1378 (1560)
+............+.|+++||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+
T Consensus 320 ~~~~~~~~~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~ 397 (588)
T PRK13657 320 RDPPGAIDLGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGT 397 (588)
T ss_pred CCCCCCCCcCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCE
Confidence 2111111111123469999999999743 35999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1379 DLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1379 di~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
|+.+++.+.+|++|+||||||.||+|||||||++++|+.++++++++++.+++++++.++|+|+||.++++|.+||||||
T Consensus 398 ~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~ 477 (588)
T PRK13657 398 DIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGER 477 (588)
T ss_pred EhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHH
Confidence 99999999999999999999999999999999999888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLL 1538 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl 1538 (1560)
|||||||||+++|+|||||||||+||++||+.|++.|++..+++|+|+||||++.++.||+|++|++|+++|.|+|++|+
T Consensus 478 QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~ 557 (588)
T PRK13657 478 QRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELV 557 (588)
T ss_pred HHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred hhccChHHHHHHHHh
Q 000406 1539 ASHLNGVYASLVRAE 1553 (1560)
Q Consensus 1539 ~~~~~g~y~~l~~~q 1553 (1560)
+ +++.|++|+..+
T Consensus 558 ~--~~~~y~~l~~~~ 570 (588)
T PRK13657 558 A--RGGRFAALLRAQ 570 (588)
T ss_pred H--CCChHHHHHHHh
Confidence 8 579999999876
No 40
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.4e-75 Score=745.00 Aligned_cols=567 Identities=21% Similarity=0.297 Sum_probs=483.1
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 332 LFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYL 411 (1560)
Q Consensus 332 ~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l 411 (1560)
+.++++|+++ .++.++++++++++..++....+++++++++.......... ... .....+..+.+++++..++.++
T Consensus 4 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~ 79 (574)
T PRK11160 4 LLPFLKLYKR-HWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGL-YSF--NYMLPAAGVRGAAIGRTAGRYG 79 (574)
T ss_pred hHHHHHHHhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccch-hhH--HHHhHHHHHHHHHHHHHHHHHH
Confidence 3456666654 34445667777777777777777888998886542110000 000 0111222344455666777888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 412 EITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLR 491 (1560)
Q Consensus 412 ~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~ 491 (1560)
+.++....+.++..++|.+++++++++|+.+|+.. ++|++++|+++|++.+++++...+..++..++.+++.+++++++
T Consensus 80 ~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~-~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 158 (574)
T PRK11160 80 ERLVSHDATFRVLTHLRVFTFSKLLPLSPAGLARY-RQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFF 158 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccChHhhccC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888889999999999999999999999999765 89999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHh
Q 000406 492 SWKVSLVVLSVTPLMMF-CGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGA 570 (1560)
Q Consensus 492 s~~l~lv~l~~~pl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~ 570 (1560)
+|.+++++++++|++++ +..++.+..++..++.++...+..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...
T Consensus 159 ~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 238 (574)
T PRK11160 159 DLTLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQR 238 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHH
Confidence 99999988877777654 34566667677777788888899999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 571 KLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGV-NVGGRGLALSLSYFAQFAQGTVAATRVFEI 649 (1560)
Q Consensus 571 k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~-~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~ 649 (1560)
+.....+....+..++..+..++++++|++++ .|.++.|.+++++.+. .....++..+...+..+.++..+++|+.++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~l 317 (574)
T PRK11160 239 RQANLTGLSQALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEI 317 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888887777777777777788889998884 7889999988876554 333456777778889999999999999999
Q ss_pred HccCCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCc
Q 000406 650 IDRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTK 729 (1560)
Q Consensus 650 l~~~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~ 729 (1560)
++.+++.+... .....+..+.|+++||+|+|++. ++++|+|+||+|+|||++||+||||||||||+++|+|+++|++
T Consensus 318 l~~~~~~~~~~--~~~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~ 394 (574)
T PRK11160 318 TEQKPEVTFPT--TSTAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQ 394 (574)
T ss_pred HhCCCCCCCCc--ccCCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCC
Confidence 98755422111 11112235689999999999753 2469999999999999999999999999999999999999999
Q ss_pred cEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCC
Q 000406 730 GLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRG 809 (1560)
Q Consensus 730 G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g 809 (1560)
|+|++||+++++++.+.+|++|+||||+|++|++||+|||.++.++.++++++++++.+++++++++ |+|+||.+|++|
T Consensus 395 G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g 473 (574)
T PRK11160 395 GEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGG 473 (574)
T ss_pred ceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCC
Confidence 9999999999999999999999999999999999999999999888899999999999999999999 999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEE
Q 000406 810 TQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVE 889 (1560)
Q Consensus 810 ~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~ 889 (1560)
.+|||||||||+||||++++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||++++..||+|++|++|++++
T Consensus 474 ~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~ 553 (574)
T PRK11160 474 RQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIE 553 (574)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEE
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred ecChhhHhhhcchHHHHHH
Q 000406 890 IGNHRQLLERGGAYHDLVK 908 (1560)
Q Consensus 890 ~G~~~~l~~~~~~~~~l~~ 908 (1560)
.|+|+|++++++.|+++++
T Consensus 554 ~g~~~~l~~~~g~y~~l~~ 572 (574)
T PRK11160 554 QGTHQELLAQQGRYYQLKQ 572 (574)
T ss_pred eCCHHHHHhcCcHHHHHHh
Confidence 9999999999999999875
No 41
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=2.5e-75 Score=762.28 Aligned_cols=556 Identities=24% Similarity=0.349 Sum_probs=485.4
Q ss_pred cHHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000406 331 GLFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAY 410 (1560)
Q Consensus 331 ~~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 410 (1560)
....++++.++. +..+...++++++..++....|++.+.++|....... ...+..+++.++++.++..++.+
T Consensus 134 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~ 205 (694)
T TIGR03375 134 PKHWFWSTLKES-WPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQA-------FETLWVLAIGVALAIVFDFVLKT 205 (694)
T ss_pred cchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCc-------HhHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555443 3334455555566666667777888999987653221 11122233344444555667788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 411 LEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFL 490 (1560)
Q Consensus 411 l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~ 490 (1560)
++.++..+.+.++..++|..++++++++|+.| +.. ++|++++|+ +|++.+++.+...+...+.+++.+++.++++++
T Consensus 206 ~~~~~~~~~~~~~~~~l~~~~~~~ll~l~~~~-~~~-~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 282 (694)
T TIGR03375 206 LRSYFLDVAGKKADLILSAKLFERVLGLRMEA-RPA-SVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAI 282 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccc-CCC-ChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 88888899999999999999999999999998 444 899999999 799999999998888888888888888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHh
Q 000406 491 RSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGA 570 (1560)
Q Consensus 491 ~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~ 570 (1560)
++|.+++++++++|+++++..++.+...+..++..+...+..+.+.|+++|+++||+|++|+.+.++|.+..++..+...
T Consensus 283 ~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~ 362 (694)
T TIGR03375 283 IGGPLVWVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGL 362 (694)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888888888888888888889999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 571 KLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEII 650 (1560)
Q Consensus 571 k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l 650 (1560)
+..........+..++..+..++++|+|++++.+|.+|+|.++++..+...+..++..+...+.++..+..+++|+.+++
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il 442 (694)
T TIGR03375 363 KSRFLSNLATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELM 442 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888887777777777777888899999999999999999999999888888999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCcc
Q 000406 651 DRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKG 730 (1560)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G 730 (1560)
+.+++.++. ......+...+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|
T Consensus 443 ~~~~e~~~~-~~~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G 520 (694)
T TIGR03375 443 QLPVERPEG-TRFLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEG 520 (694)
T ss_pred cCCCCCCCC-CCCCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCc
Confidence 875542211 1111112345789999999999743 35699999999999999999999999999999999999999999
Q ss_pred EEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCC
Q 000406 731 LITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGT 810 (1560)
Q Consensus 731 ~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~ 810 (1560)
+|.+||+|+++++...+|++|+||||+|++|++||+|||.++.++.++++++++++.++++++++.+|+|++|.+|++|.
T Consensus 521 ~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~ 600 (694)
T TIGR03375 521 SVLLDGVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGR 600 (694)
T ss_pred eEEECCEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCC
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEe
Q 000406 811 QLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEI 890 (1560)
Q Consensus 811 ~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~ 890 (1560)
+|||||||||+||||++++|+|||||||||+||+++++.+++.|+++.+++|+|+||||++++..||+|++|++|+++|.
T Consensus 601 ~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~ 680 (694)
T TIGR03375 601 SLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVAD 680 (694)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEee
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred cChhhHhhh
Q 000406 891 GNHRQLLER 899 (1560)
Q Consensus 891 G~~~~l~~~ 899 (1560)
|+|+||+++
T Consensus 681 G~~~eLl~~ 689 (694)
T TIGR03375 681 GPKDQVLEA 689 (694)
T ss_pred CCHHHHHHH
Confidence 999999864
No 42
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=8.8e-76 Score=745.10 Aligned_cols=520 Identities=23% Similarity=0.290 Sum_probs=445.4
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHH--HHHHHHHHHHHHHHHHHHHHHHH
Q 000406 982 IWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYL--SLALVGLGFGCIIFMTGQQGFCG 1059 (1560)
Q Consensus 982 l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~ 1059 (1560)
++++.+++++.++++++++++...+....|++++.+++....... ....+ ...++++.++..++.++..++..
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (529)
T TIGR02868 4 ILPLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP-----VLYLSVAAVAVRAFGIGRAVFRYLERLVGH 78 (529)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566666667777777777777777778888877765542211 11111 11122334455666777788888
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1060 WAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLT 1139 (1560)
Q Consensus 1060 ~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~ 1139 (1560)
..+.++..++|..+|++++++|+.||+ ++++|++++|+++|++.+++.+...+..++..++..+++++++++++|.++
T Consensus 79 ~~~~~~~~~lr~~~~~~ll~~~~~~~~--~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 156 (529)
T TIGR02868 79 DAALRSLGRLRVRVYDRLARLALAGRR--RFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAA 156 (529)
T ss_pred HHHHHHHHHHHHHHHHHhhccCccccc--cCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 889999999999999999999999987 789999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HHHHHHhcc-hhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHH
Q 000406 1140 LVAAALTPFTLGAS-YLSLIINVG-PKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQI 1217 (1560)
Q Consensus 1140 lv~l~~ipl~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~ 1217 (1560)
+++++.+|++.++. ++....... .+..+....+..+.+.|.++|+++||+|+.++.+.++|++..++..+...+...+
T Consensus 157 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (529)
T TIGR02868 157 LVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARA 236 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99887777665443 333332222 2233556678889999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCc
Q 000406 1218 LGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPL 1297 (1560)
Q Consensus 1218 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~ 1297 (1560)
.+....+...+..+..++++++|++++..|.++.|.+.+++.+...+..++..+...+..+..+..+.+|+.++++.+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~ 316 (529)
T TIGR02868 237 TGLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGP 316 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 88888888888888888889999999999999999999999999999999999999999999999999999999976654
Q ss_pred ccccccc--ccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEE
Q 000406 1298 IDNVKGR--KLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMI 1375 (1560)
Q Consensus 1298 ~~~~~~~--~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~I 1375 (1560)
.++.... ....+..+.|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|++
T Consensus 317 ~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i 394 (529)
T TIGR02868 317 RPEGVVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTL 394 (529)
T ss_pred cCCCCCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEE
Confidence 3221111 0111223569999999999753 35999999999999999999999999999999999999999999999
Q ss_pred CCEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCCh
Q 000406 1376 EGVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSG 1455 (1560)
Q Consensus 1376 dGvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSG 1455 (1560)
||+|++++ .+++|++|+||||||+||+|||||||++|+|+++++++++|++.++++++|.+||+||||+|||+|.+|||
T Consensus 395 ~g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSG 473 (529)
T TIGR02868 395 DGVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSG 473 (529)
T ss_pred CCEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCH
Confidence 99999999 99999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecCh
Q 000406 1456 GQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRL 1511 (1560)
Q Consensus 1456 GQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRl 1511 (1560)
||||||||||||+++|+|||||||||+||++||+.|++.|++..+++|+|+||||+
T Consensus 474 GQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 474 GERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 99999999999999999999999999999999999999999988999999999996
No 43
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=4.2e-75 Score=747.03 Aligned_cols=568 Identities=33% Similarity=0.503 Sum_probs=486.5
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 979 LSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFC 1058 (1560)
Q Consensus 979 ~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 1058 (1560)
.+.++++.++.++.+.+.+++.++...+....|+++..+++..+.... ......+..+++++.++..++.+++.++.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (576)
T TIGR02204 6 LAALWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDS---SGLLNRYFAFLLVVALVLALGTAARFYLV 82 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566666677777777777777777778888888888776442211 11122223333444444556667778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1059 GWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRL 1138 (1560)
Q Consensus 1059 ~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l 1138 (1560)
..++.++...+|..+++++++.|+.+|+ +.+.|++++|+++|++.+++++...+..++.+++.+++++++++.++|.+
T Consensus 83 ~~~~~~~~~~lr~~l~~~l~~~~~~~~~--~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 160 (576)
T TIGR02204 83 TWLGERVVADIRRAVFAHLISLSPSFFD--KNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKL 160 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHc--cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 8899999999999999999999999986 68899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHH
Q 000406 1139 TLVAAALTPFTLGASYLS-LIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQI 1217 (1560)
Q Consensus 1139 ~lv~l~~ipl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~ 1217 (1560)
++++++.+|++++..++. .......+.......+..+.+.|.++|+++||+++.++.+.++|++..++..+...+....
T Consensus 161 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (576)
T TIGR02204 161 TSLVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRT 240 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888888776555433 3333333333556677789999999999999999999999999999999988888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCc
Q 000406 1218 LGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPL 1297 (1560)
Q Consensus 1218 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~ 1297 (1560)
......+...+..+..++++++|++++..|.+++|.++++..+......|+..+...+.++..+..+++|+.++++.+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~ 320 (576)
T TIGR02204 241 RALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPD 320 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 77766666666667777888899999999999999999999999999999999999999999999999999999876543
Q ss_pred ccccc-ccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEEC
Q 000406 1298 IDNVK-GRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIE 1376 (1560)
Q Consensus 1298 ~~~~~-~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~Id 1376 (1560)
.+... ....+.+..+.|+++||+|+|++++++++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|.+|
T Consensus 321 ~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~ 400 (576)
T TIGR02204 321 IKAPAHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLD 400 (576)
T ss_pred CCCCCCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEEC
Confidence 22111 11111122346999999999986433579999999999999999999999999999999999999999999999
Q ss_pred CEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChH
Q 000406 1377 GVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGG 1456 (1560)
Q Consensus 1377 Gvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGG 1456 (1560)
|+|+++++.+++|++|+||||||++|+|||||||.+++|+.++++++++++.+++.+++.++|+|+||+++|+|.+||||
T Consensus 401 g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgG 480 (576)
T TIGR02204 401 GVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGG 480 (576)
T ss_pred CEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHH
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHH
Q 000406 1457 QKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHET 1536 (1560)
Q Consensus 1457 QrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~e 1536 (1560)
||||||||||++++|+|||||||||+||++|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++
T Consensus 481 q~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~ 560 (576)
T TIGR02204 481 QRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAE 560 (576)
T ss_pred HHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHH
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred HHhhccChHHHHHHHHh
Q 000406 1537 LLASHLNGVYASLVRAE 1553 (1560)
Q Consensus 1537 Ll~~~~~g~y~~l~~~q 1553 (1560)
|++ +++.|++|++.|
T Consensus 561 l~~--~~~~~~~l~~~~ 575 (576)
T TIGR02204 561 LIA--KGGLYARLARLQ 575 (576)
T ss_pred HHH--cCChHHHHHhhc
Confidence 997 579999998765
No 44
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=7e-75 Score=741.68 Aligned_cols=563 Identities=26% Similarity=0.366 Sum_probs=478.0
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 980 SEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCG 1059 (1560)
Q Consensus 980 ~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1059 (1560)
++++++.+++++.++++++++++..++....|++++.+++...... ....+.+.++++.++..+..++..++..
T Consensus 8 ~~l~~~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (585)
T TIGR01192 8 VRALSYLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKS------DVLPTLALWAGFGVFNTIAYVLVAREAD 81 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------cHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777778888888888888888888889999988887655321 1111111222222233333334444444
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1060 WAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLT 1139 (1560)
Q Consensus 1060 ~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~ 1139 (1560)
....++..++|..+|++++++|+.||+ ++++|++++|+++|++.+..++...+..++..+++.++.+++++.++|.++
T Consensus 82 ~~~~~~~~~lr~~~~~~l~~l~~~~~~--~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 159 (585)
T TIGR01192 82 RLAHGRRATLLTEAFGRIISMPLSWHQ--QRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLS 159 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHhC--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555566667778999999999999987 688999999999999999999998888888888888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHH
Q 000406 1140 LVAAALTPFTLGASYLSL-IINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQIL 1218 (1560)
Q Consensus 1140 lv~l~~ipl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 1218 (1560)
+++++++|+++++..+.. ......+.......+..+.+.|+++|+++||+|+.++.+.+++.+..++..+...+..+..
T Consensus 160 li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (585)
T TIGR01192 160 IVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWW 239 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998888887766554433 3322223335566778899999999999999999999999999999999888888877777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCcc
Q 000406 1219 GLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLI 1298 (1560)
Q Consensus 1219 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~ 1298 (1560)
.+...+...+..+..++++++|++++..|.+++|.+++++.+...+..++..+...+.....+..+++|+.++.+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~ 319 (585)
T TIGR01192 240 ALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQR 319 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence 77777777777788888899999999999999999999999999999999999999999999999999999998765433
Q ss_pred ccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCE
Q 000406 1299 DNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGV 1378 (1560)
Q Consensus 1299 ~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGv 1378 (1560)
++...........+.|+++||+|+|++. .++|+|+||+|++||++||||+||||||||+++|+|+++|++|+|.+||+
T Consensus 320 ~~~~~~~~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~ 397 (585)
T TIGR01192 320 EEPADAPELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGI 397 (585)
T ss_pred cCCccCCCCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCE
Confidence 2111111111123469999999999743 35899999999999999999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1379 DLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1379 di~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
|+.+++.+.+|++++||||||.+|++||+|||.++.+++++++++++++.+++++++.++|+|+||.+|++|.+||||||
T Consensus 398 ~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~ 477 (585)
T TIGR01192 398 DINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGER 477 (585)
T ss_pred EhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHH
Confidence 99999999999999999999999999999999999888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLL 1538 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl 1538 (1560)
|||+|||||+++|+|||||||||+||+++++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+
T Consensus 478 qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~ 557 (585)
T TIGR01192 478 QRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELI 557 (585)
T ss_pred HHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hhccChHHHHHHHHhh
Q 000406 1539 ASHLNGVYASLVRAET 1554 (1560)
Q Consensus 1539 ~~~~~g~y~~l~~~q~ 1554 (1560)
+ ++|.|+++++.+.
T Consensus 558 ~--~~~~y~~l~~~~~ 571 (585)
T TIGR01192 558 Q--KDGRFYKLLRRSG 571 (585)
T ss_pred H--CCChHHHHHHhCc
Confidence 8 5799999998874
No 45
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=9e-75 Score=744.49 Aligned_cols=565 Identities=29% Similarity=0.463 Sum_probs=488.8
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 333 FSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLE 412 (1560)
Q Consensus 333 ~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~ 412 (1560)
..+++++++..+ .+++.+++.++..++....+++++.+++...... . . ......+.++++++++..++.++.
T Consensus 14 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~--~--~---~~~~~~~~~~~~~~l~~~~~~~~~ 85 (582)
T PRK11176 14 RRLWPTIAPFKA-GLIVAGVALILNAASDTFMLSLLKPLLDDGFGKA--D--R---SVLKWMPLVVIGLMILRGITSFIS 85 (582)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--c--h---hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555554433 3445556666666666777778888887665321 1 0 111222333344556666777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 413 ITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLRS 492 (1560)
Q Consensus 413 ~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~s 492 (1560)
.++..+++.++..++|..+++++++.|..+|+.. ++|++++|+++|++.+.+.+...+..++..++.+++.++++++++
T Consensus 86 ~~~~~~~~~~~~~~lr~~~~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (582)
T PRK11176 86 SYCISWVSGKVVMTMRRRLFGHMMGMPVSFFDKQ-STGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYS 164 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7788889999999999999999999999999755 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhHH
Q 000406 493 WKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKL 572 (1560)
Q Consensus 493 ~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k~ 572 (1560)
|.+++++++++|+.+++...+.+..++..++.++...+..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+.
T Consensus 165 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (582)
T PRK11176 165 WQLSLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKM 244 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888888888888888888888888888999999999999999999999999999999999988888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000406 573 GFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIIDR 652 (1560)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~~ 652 (1560)
.........+..++..+..++++++|++++..|.+++|.+++++.++..+..++..+...+..+..+..+.+|+.++++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~ 324 (582)
T PRK11176 245 VSASSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDL 324 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 77777777777777777777788899999999999999999888887888889999999999999999999999999986
Q ss_pred CCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEE
Q 000406 653 VPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLI 732 (1560)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I 732 (1560)
+++.+. .....++..+.|+++||+|+|++. ++++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|
T Consensus 325 ~~~~~~---~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I 400 (582)
T PRK11176 325 EQEKDE---GKRVIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEI 400 (582)
T ss_pred CCcCCC---CCcCCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceE
Confidence 433111 111122334679999999999753 3569999999999999999999999999999999999999999999
Q ss_pred EECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCC-CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCC
Q 000406 733 TLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKEN-ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQ 811 (1560)
Q Consensus 733 ~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~-~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~ 811 (1560)
++||+|+++++.+.+|++|+||||+|.+|++||+|||.++.++ .++++++++++.++++++++++|+|+||.+|++|.+
T Consensus 401 ~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~ 480 (582)
T PRK11176 401 LLDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVL 480 (582)
T ss_pred EECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCc
Confidence 9999999999999999999999999999999999999998754 689999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEec
Q 000406 812 LSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIG 891 (1560)
Q Consensus 812 LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G 891 (1560)
|||||||||+|||||+++|+|||||||||+||+++++.+.+.|.++.+++|+|+||||++.++.||+|++|++|+++|.|
T Consensus 481 LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g 560 (582)
T PRK11176 481 LSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERG 560 (582)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999999987899999999999999999999999999999999
Q ss_pred ChhhHhhhcchHHHHHHHH
Q 000406 892 NHRQLLERGGAYHDLVKLA 910 (1560)
Q Consensus 892 ~~~~l~~~~~~~~~l~~~~ 910 (1560)
+|++++++++.|++++..+
T Consensus 561 ~~~~l~~~~~~y~~l~~~~ 579 (582)
T PRK11176 561 THAELLAQNGVYAQLHKMQ 579 (582)
T ss_pred CHHHHHhCCChHHHHHHHH
Confidence 9999999999999998643
No 46
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.7e-75 Score=692.53 Aligned_cols=551 Identities=26% Similarity=0.358 Sum_probs=488.8
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 350 GCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLEITCWRLVGERSAQRIRT 429 (1560)
Q Consensus 350 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lr~ 429 (1560)
..+++.+.+++.....+++...++.+..+. ....+..+++.++++.++..+..+.+.......+.++...||.
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~~-------~~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~ 77 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEGQ-------LFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQ 77 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555556666666778888887776432 1233445566666677777778888877778889999999999
Q ss_pred HHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 430 KYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLRSWKVSLVVLSVTPLMMFC 509 (1560)
Q Consensus 430 ~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~s~~l~lv~l~~~pl~~~~ 509 (1560)
.+++++.+.+..+-... ++|++.+.+...++.++..+...++.++..++..+..++.+++++|.-++++++++|++.+.
T Consensus 78 ~~l~~l~~~gp~~~~~~-~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlf 156 (559)
T COG4988 78 LVLDKLAKLGPAFIAQK-PAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLF 156 (559)
T ss_pred HHHHHHHhCChhhhcCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 99999999999988644 99999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhHHHHHHHHHHHHHHHHHHH
Q 000406 510 GMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKLGFAKGAGMGVIYLVTYA 589 (1560)
Q Consensus 510 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~ 589 (1560)
...+....++..+++...+..+.+++.+.++|+.|+|.|+..+...+++.+..++.++..++..+..-....++.++.++
T Consensus 157 Milvg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~l 236 (559)
T COG4988 157 MILVGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYL 236 (559)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999998888888888888888888
Q ss_pred HHHHHHHHHHHHHhc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcCCC
Q 000406 590 TWALAFWYGSILVAR-KELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIIDRVPEIDPYNSEGRKLSS 668 (1560)
Q Consensus 590 ~~~~~~~~g~~lv~~-g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~~~~~~~~~~~~~~~~~~ 668 (1560)
..+++..+.+..... |.++....+.++....-+..|+..+.+.|..-.++.++.++++.+++.+++..+..........
T Consensus 237 siAlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~ 316 (559)
T COG4988 237 SIALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANE 316 (559)
T ss_pred HHHHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccC
Confidence 887766555555555 7999988888888888888999999999999999999999999999875543221111111122
Q ss_pred CcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHh
Q 000406 669 VSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLR 748 (1560)
Q Consensus 669 ~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr 748 (1560)
....|+++|++|.|++. +++++|+||++++|+++||||+||||||||+++|+|+++|++|+|.+||+++++++.+.+|
T Consensus 317 ~~~ei~~~~l~~~y~~g--~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~ 394 (559)
T COG4988 317 PPIEISLENLSFRYPDG--KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWR 394 (559)
T ss_pred CCceeeecceEEecCCC--CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHH
Confidence 23345566999999854 3789999999999999999999999999999999999999999999999999999999999
Q ss_pred ccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhcc
Q 000406 749 TQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIK 828 (1560)
Q Consensus 749 ~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~ 828 (1560)
+++++|+|+|++|++||||||.+++++.++++++++++.+++.+++.. |+|+||.+||+|.+|||||+|||+|||||++
T Consensus 395 k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~ 473 (559)
T COG4988 395 KQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLS 473 (559)
T ss_pred hHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhhcchHHHHHH
Q 000406 829 DPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLERGGAYHDLVK 908 (1560)
Q Consensus 829 ~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~~~~~~~l~~ 908 (1560)
+++++|||||||+||.++|+.|.+.|.++.+++|||+||||++.+.+||+|+||++|+++|.|+|++|.++++.|++++.
T Consensus 474 ~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~~ 553 (559)
T COG4988 474 PASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANLLK 553 (559)
T ss_pred CCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred HHH
Q 000406 909 LAS 911 (1560)
Q Consensus 909 ~~~ 911 (1560)
.+.
T Consensus 554 ~q~ 556 (559)
T COG4988 554 QQE 556 (559)
T ss_pred HHh
Confidence 654
No 47
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=2.3e-74 Score=752.68 Aligned_cols=567 Identities=28% Similarity=0.412 Sum_probs=494.8
Q ss_pred ccHHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000406 330 VGLFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGA 409 (1560)
Q Consensus 330 ~~~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 409 (1560)
..+..++++.++.. ..+...++++++..++....+++++.++|.+..... ...+..+++.++++.++..++.
T Consensus 125 ~~~~~~~~~~~~~~-~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~-------~~~l~~l~~~~~~~~~~~~~~~ 196 (694)
T TIGR01846 125 FGFSWFIPAIIRYR-KQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG-------LSTLSVLALAMLAVAIFEPALG 196 (694)
T ss_pred CcHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC-------hhHHHHHHHHHHHHHHHHHHHH
Confidence 34555666655433 334445555555666666777889999987763221 1122334444555566677788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 410 YLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGF 489 (1560)
Q Consensus 410 ~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~ 489 (1560)
+++.++...++.++..++|.+++++++++|+.||+.. ++|++++|+ +|++.+++++...+..++.+++.+++.+++++
T Consensus 197 ~l~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~f~~~-~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 274 (694)
T TIGR01846 197 GLRTYLFAHLTSRIDVELGARLYRHLLGLPLGYFESR-RVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMF 274 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHcCCC-CHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888899999999999999999999999999999766 899999999 69999999998888888888887777788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHH
Q 000406 490 LRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFG 569 (1560)
Q Consensus 490 ~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~ 569 (1560)
+++|.+++++++++|+++++..++.+..++...+..+...+..+.+.|+++|+++||+++.|+.+.++|.+..++..+..
T Consensus 275 ~~~~~l~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~ 354 (694)
T TIGR01846 275 FYSPTLTGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAAS 354 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999888988888888887777777777778888999999999999999999999999999999999888888
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 570 AKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEI 649 (1560)
Q Consensus 570 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~ 649 (1560)
.+..........+..++..+..++++|+|++++.+|.+|+|.++++..+...+..|+..+...+..+.++..+++|+.++
T Consensus 355 ~~~~~~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~ 434 (694)
T TIGR01846 355 FRVTNLGNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDI 434 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888877777777777788888889999999999999999999999888888899999999999999999999999999
Q ss_pred HccCCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCc
Q 000406 650 IDRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTK 729 (1560)
Q Consensus 650 l~~~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~ 729 (1560)
++.+++.+.. .....+...+.|+++||+|+|+.. ++++|+|+||+|++||++||+|+||||||||+++|+|+++|++
T Consensus 435 l~~~~e~~~~--~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~ 511 (694)
T TIGR01846 435 LNSPTEPRSA--GLAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQH 511 (694)
T ss_pred HcCCCCccCC--CCCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCC
Confidence 9865442211 111122345789999999999743 3469999999999999999999999999999999999999999
Q ss_pred cEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCC
Q 000406 730 GLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRG 809 (1560)
Q Consensus 730 G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g 809 (1560)
|+|++||+|+++++...+|++|+||+|+|.+|++||+|||.++.++.++++++++|+.+++++++.++|.|++|.++++|
T Consensus 512 G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g 591 (694)
T TIGR01846 512 GQVLVDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKG 591 (694)
T ss_pred ceEEECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCC
Confidence 99999999999999999999999999999999999999999998888899999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEE
Q 000406 810 TQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVE 889 (1560)
Q Consensus 810 ~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~ 889 (1560)
.+||||||||++|||||+++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||++.+..||+|++|++|++++
T Consensus 592 ~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~ 671 (694)
T TIGR01846 592 ANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAE 671 (694)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred ecChhhHhhhcchHHHHHHH
Q 000406 890 IGNHRQLLERGGAYHDLVKL 909 (1560)
Q Consensus 890 ~G~~~~l~~~~~~~~~l~~~ 909 (1560)
.|+|++++++++.|+++++.
T Consensus 672 ~g~~~~l~~~~~~y~~l~~~ 691 (694)
T TIGR01846 672 SGRHEELLALQGLYARLWQQ 691 (694)
T ss_pred eCCHHHHHHcCChHHHHHHh
Confidence 99999999999999999864
No 48
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=6.3e-75 Score=801.40 Aligned_cols=569 Identities=21% Similarity=0.264 Sum_probs=444.8
Q ss_pred cCcccHHHHHHHhhhhh-HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHH
Q 000406 327 AKPVGLFSLFKYSTKLD-MILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIV 405 (1560)
Q Consensus 327 ~~~~~~~~l~~y~~~~~-~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 405 (1560)
.+.+++..+.+|.+... ++.+++.+++.++..++..+.++|++.|.+..... . .....+++++++++++.
T Consensus 896 ~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~~---~------~~~~~~~~i~~~l~~~~ 966 (1622)
T PLN03130 896 TGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTPK---T------HGPLFYNLIYALLSFGQ 966 (1622)
T ss_pred cCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccC---C------CchhHHHHHHHHHHHHH
Confidence 34556555555554422 23333334444444554555566666666532211 0 11123566677788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 406 MMGAYLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGY 485 (1560)
Q Consensus 406 ~~~~~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ 485 (1560)
.++.+++.+++.+.+.++..++|.+++++++++|+.|||++ ++|+++||+++|++.+++.++..+..++..++.+++.+
T Consensus 967 ~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~-~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~ 1045 (1622)
T PLN03130 967 VLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTN-PLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTF 1045 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888889999999999999999999999999866 99999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhH
Q 000406 486 TVGFLRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADS 565 (1560)
Q Consensus 486 ii~~~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~ 565 (1560)
+++++++|...++++++..+++.+..++.+..++..+......++..+++.|+++|+++||+|++++.+.+++.+..+..
T Consensus 1046 i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~ 1125 (1622)
T PLN03130 1046 VLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNN 1125 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 88888887554444433333444556666777777777777788899999999999999999999998888877766665
Q ss_pred hHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 566 IPFGAKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKE-LS-----GGAAIACFFGVNVGGRGLALSLSYFAQFAQG 639 (1560)
Q Consensus 566 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~-ls-----~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a 639 (1560)
.+..........+......++ ..+++++.+...+..+. .. .+.+..++.+...+...+..+...+..++++
T Consensus 1126 ~~~~~~~~~~~~wl~~~l~~~---~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~ 1202 (1622)
T PLN03130 1126 IRFTLVNMSSNRWLAIRLETL---GGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENS 1202 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 433222111111111111111 11122222333343321 11 2333333344455556677777888889999
Q ss_pred HHHHHHHHHHHccCCCCCCCCCCC--CcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHH
Q 000406 640 TVAATRVFEIIDRVPEIDPYNSEG--RKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTV 717 (1560)
Q Consensus 640 ~~a~~Ri~~~l~~~~~~~~~~~~~--~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTL 717 (1560)
+.|++|+.++++.++|.+...... ...++..|.|+|+||+|+|+.. .+++|+||||+|+|||++||||+||||||||
T Consensus 1203 ~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGKSTL 1281 (1622)
T PLN03130 1203 LNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGKSSM 1281 (1622)
T ss_pred HHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCHHHH
Confidence 999999999998655432111111 1112456899999999999643 2469999999999999999999999999999
Q ss_pred HHHHhcCCCCCccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhC
Q 000406 718 FALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISEL 797 (1560)
Q Consensus 718 l~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l 797 (1560)
+++|+|+|+|++|+|+|||+|+++++++++|++|++|||||.||+|||||||.++. ..++++++++++.++++++|.++
T Consensus 1282 l~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~tdeei~~Al~~a~l~~~I~~l 1360 (1622)
T PLN03130 1282 LNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHNDADLWESLERAHLKDVIRRN 1360 (1622)
T ss_pred HHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCCHHHHHHHHHHcCcHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999986 46899999999999999999999
Q ss_pred CCCCCcccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCC
Q 000406 798 PLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNAN 877 (1560)
Q Consensus 798 ~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D 877 (1560)
|.|+||.+|++|.+|||||||||||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||
T Consensus 1361 p~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~D 1440 (1622)
T PLN03130 1361 SLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCD 1440 (1622)
T ss_pred ccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999989999999999999999999
Q ss_pred EEEEEeCCeEEEecChhhHhhh-cchHHHHHHHH
Q 000406 878 TIVVLDQGSVVEIGNHRQLLER-GGAYHDLVKLA 910 (1560)
Q Consensus 878 ~i~vl~~G~iv~~G~~~~l~~~-~~~~~~l~~~~ 910 (1560)
||+||++|+|+|.|+|++|+++ ++.|+++++..
T Consensus 1441 rIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~ 1474 (1622)
T PLN03130 1441 RILVLDAGRVVEFDTPENLLSNEGSAFSKMVQST 1474 (1622)
T ss_pred EEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHc
Confidence 9999999999999999999986 68999998754
No 49
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=5.6e-74 Score=737.75 Aligned_cols=562 Identities=26% Similarity=0.363 Sum_probs=469.7
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 335 LFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLEIT 414 (1560)
Q Consensus 335 l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~ 414 (1560)
+++|..+ .+..+++.++++++..++....+++++.++|......... ......++++++++.++..++.+++.+
T Consensus 14 l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (592)
T PRK10790 14 LLAYGSP-WRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLP-----LGLVAGLAAAYVGLQLLAAGLHYAQSL 87 (592)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-----hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344333 3344556666777777777788889999998765322110 011111223344444555667777778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 415 CWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLRSWK 494 (1560)
Q Consensus 415 ~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~s~~ 494 (1560)
.....+.+...++|.++++++++.|+++|+.. ++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.
T Consensus 88 ~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (592)
T PRK10790 88 LFNRAAVGVVQQLRTDVMDAALRQPLSAFDTQ-PVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWR 166 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999765 89999999999999999999999999999999888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhHHHH
Q 000406 495 VSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKLGF 574 (1560)
Q Consensus 495 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k~~~ 574 (1560)
+++++++++|+++++...+.+......++..+...+....+.|.++|+++||+|+.|+.+.+++.+..++..+...+...
T Consensus 167 l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (592)
T PRK10790 167 MALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLR 246 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988888888877777777777777777777778888999999999999999999999999999888776665555544
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000406 575 AKGAG-MGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIIDRV 653 (1560)
Q Consensus 575 ~~~~~-~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~~~ 653 (1560)
..+.. ..+..++..+...++.++++. +..|.++.|.++++..+...+..++..+...+..+.++..+++|+.++++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~ 325 (592)
T PRK10790 247 LDGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGP 325 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 44332 222222222222222222333 5789999999999988888888899999999999999999999999999864
Q ss_pred CCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEE
Q 000406 654 PEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLIT 733 (1560)
Q Consensus 654 ~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~ 733 (1560)
++... . ...+...+.|+++||+|+|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+|+|++|+|.
T Consensus 326 ~~~~~--~--~~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~ 399 (592)
T PRK10790 326 RQQYG--N--DDRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIR 399 (592)
T ss_pred CccCC--C--CccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEE
Confidence 33111 1 111223467999999999974 24699999999999999999999999999999999999999999999
Q ss_pred ECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCC
Q 000406 734 LDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLS 813 (1560)
Q Consensus 734 i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LS 813 (1560)
+||.|+++++.+.+|++|+||||+|.+|++||+|||.++. ..++++++++++.++++++++.+|+|+||.+|++|.+||
T Consensus 400 idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LS 478 (592)
T PRK10790 400 LDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLS 478 (592)
T ss_pred ECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCC
Confidence 9999999999999999999999999999999999999997 578999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecCh
Q 000406 814 GGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNH 893 (1560)
Q Consensus 814 gGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~ 893 (1560)
|||||||+|||||+++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||++.+..||+|++|++|++++.|+|
T Consensus 479 GGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~ 558 (592)
T PRK10790 479 VGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTH 558 (592)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCH
Confidence 99999999999999999999999999999999999999999998788999999999999999999999999999999999
Q ss_pred hhHhhhcchHHHHHHHHH
Q 000406 894 RQLLERGGAYHDLVKLAS 911 (1560)
Q Consensus 894 ~~l~~~~~~~~~l~~~~~ 911 (1560)
+|++++++.|+++++.+.
T Consensus 559 ~~L~~~~~~y~~l~~~~~ 576 (592)
T PRK10790 559 QQLLAAQGRYWQMYQLQL 576 (592)
T ss_pred HHHHhCCCHHHHHHHHHh
Confidence 999999999999987653
No 50
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.2e-74 Score=738.45 Aligned_cols=541 Identities=27% Similarity=0.386 Sum_probs=463.1
Q ss_pred HHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 000406 1005 AILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGW 1084 (1560)
Q Consensus 1005 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~f 1084 (1560)
++....|++++.+++........ ......+.++++++.++..++.++..++....+.++..++|..+|++++++|+.|
T Consensus 9 ~~~~~~p~~~~~iid~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~ 86 (569)
T PRK10789 9 MLQLIPPKVVGIIVDGVTEQHMT--TGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEF 86 (569)
T ss_pred HHHHHHHHHHHHHHHHhccCCcc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence 34455677777777655432111 1112233334444445566667777778888899999999999999999999999
Q ss_pred cccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcc
Q 000406 1085 FDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVS-LVLNWRLTLVAAALTPFTLGASYLSL-IINVG 1162 (1560)
Q Consensus 1085 fd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~-~~~~~~l~lv~l~~ipl~~~~~~~~~-~~~~~ 1162 (1560)
|+ ++++|++++|+++|++.++..+...+..++..++..+++++++ ++++|.+++++++++|++++...... .....
T Consensus 87 ~~--~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~ 164 (569)
T PRK10789 87 YL--RHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHER 164 (569)
T ss_pred Hc--CCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87 6899999999999999999888888888777766666665555 57999999998888887766544333 33332
Q ss_pred hhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1163 PKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAY 1242 (1560)
Q Consensus 1163 ~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 1242 (1560)
.+..+....+..+.+.|.+.|+++||+|+.++.+.++|.+..++..+...+.....+....+...+..+..++++++|++
T Consensus 165 ~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 244 (569)
T PRK10789 165 FKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSW 244 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33335566778899999999999999999999999999999999988888888888877777777777778888899999
Q ss_pred HHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCccccccccccCCCCCccEEEEEEEEE
Q 000406 1243 LVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLIDNVKGRKLERSKPLGIELKMVTFT 1322 (1560)
Q Consensus 1243 lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~~~~~~~~~~~~~~~~I~~~nVsf~ 1322 (1560)
++..|.+++|.++++..+......|+..+...+..+..+..+.+|+.++++.+++.+... ... ...++.|+++||+|+
T Consensus 245 lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~-~~~-~~~~~~I~~~~v~~~ 322 (569)
T PRK10789 245 MVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS-EPV-PEGRGELDVNIRQFT 322 (569)
T ss_pred HHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC-CCC-CCCCCcEEEEEEEEE
Confidence 999999999999999999999999999999999999999999999999987654432211 111 112346999999999
Q ss_pred cCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceEEEcCCCCCC
Q 000406 1323 YPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEPALF 1402 (1560)
Q Consensus 1323 Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~LF 1402 (1560)
|+.. +.++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+.+|++++||||+|+||
T Consensus 323 y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf 401 (569)
T PRK10789 323 YPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLF 401 (569)
T ss_pred CCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeec
Confidence 9753 346999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcC
Q 000406 1403 AGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSA 1482 (1560)
Q Consensus 1403 ~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSa 1482 (1560)
++||||||+++.++.++++++++++.+++++++.++|+|+||.+|++|.+|||||||||+|||||+++|+|||||||||+
T Consensus 402 ~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~ 481 (569)
T PRK10789 402 SDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSA 481 (569)
T ss_pred cccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECcccc
Confidence 99999999999888999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHhhccChHHHHHHHHhh
Q 000406 1483 LDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLASHLNGVYASLVRAET 1554 (1560)
Q Consensus 1483 LD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~~l~~~q~ 1554 (1560)
||+++++.|++.|++..+++|+|+||||++++..||+|++|++|+|+|.|+|++|++ +++.|++|++.|.
T Consensus 482 LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~--~~~~y~~l~~~~~ 551 (569)
T PRK10789 482 VDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQ--QSGWYRDMYRYQQ 551 (569)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHH--cCChHHHHHHHhh
Confidence 999999999999999888999999999999999999999999999999999999998 5799999998764
No 51
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=1.3e-73 Score=732.79 Aligned_cols=563 Identities=31% Similarity=0.472 Sum_probs=500.9
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 334 SLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLEI 413 (1560)
Q Consensus 334 ~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~ 413 (1560)
.++++.++ .++.++++++++++.+++.+..+++++.+++....... ......++++++++.++..++.++..
T Consensus 4 ~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~~~~i~~~~~~~~~~ 75 (571)
T TIGR02203 4 RLWSYVRP-YKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD-------RSVLWWVPLVVIGLAVLRGICSFVST 75 (571)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc-------hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35555443 34556777778888888888888899888886553221 11222334455666677777888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 414 TCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLRSW 493 (1560)
Q Consensus 414 ~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~s~ 493 (1560)
+.....+.++..++|..+++++++.|.++|+.. +.|++++|+++|++.+++.+...+..++.+++.+++.++++++++|
T Consensus 76 ~~~~~~~~~~~~~lr~~l~~~~~~~~~~~~~~~-~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~ 154 (571)
T TIGR02203 76 YLLSWVSNKVVRDIRVRMFEKLLGLPVSFFDRQ-PTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSW 154 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 889999999999999999999999999999755 8999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhHHH
Q 000406 494 KVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKLG 573 (1560)
Q Consensus 494 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k~~ 573 (1560)
.++++++++.|+++++..++.+..+....+..+..++..+.+.|.++|+++||.++.++.+.++|.+..++..+...+..
T Consensus 155 ~l~~i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (571)
T TIGR02203 155 QLTLIVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMT 234 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888888888888889999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000406 574 FAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIIDRV 653 (1560)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~~~ 653 (1560)
...+....+..++.++..++++++|++++..|.+++|.++++..++..+..|+..+...+..+.++..+.+|+.++++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~ 314 (571)
T TIGR02203 235 SAGSISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSP 314 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 88887777777777788888899999999999999999999999999999999999999999999999999999999865
Q ss_pred CCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEE
Q 000406 654 PEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLIT 733 (1560)
Q Consensus 654 ~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~ 733 (1560)
++.+.. .....+..+.|+++||+|+|++. +.++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+
T Consensus 315 ~~~~~~---~~~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~ 390 (571)
T TIGR02203 315 PEKDTG---TRAIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQIL 390 (571)
T ss_pred CCCCCC---CCCCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEE
Confidence 432211 11112235679999999999754 35799999999999999999999999999999999999999999999
Q ss_pred ECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCC-CCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCC
Q 000406 734 LDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKE-NATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQL 812 (1560)
Q Consensus 734 i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~-~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~L 812 (1560)
+||+++++++.+++|++|+||||+|++|++|++|||.++.+ +.++++++++++.+++++++.++|+|+||.+|++|.+|
T Consensus 391 i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~L 470 (571)
T TIGR02203 391 LDGHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLL 470 (571)
T ss_pred ECCEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcC
Confidence 99999999999999999999999999999999999999986 67899999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecC
Q 000406 813 SGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGN 892 (1560)
Q Consensus 813 SgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~ 892 (1560)
||||||||+||||++++|+|||||||||+||+++++.+.+.|++..+++|+|+||||++.+..||+|++|++|++++.|+
T Consensus 471 SgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~ 550 (571)
T TIGR02203 471 SGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGT 550 (571)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCC
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred hhhHhhhcchHHHHHHH
Q 000406 893 HRQLLERGGAYHDLVKL 909 (1560)
Q Consensus 893 ~~~l~~~~~~~~~l~~~ 909 (1560)
|+++++.++.|++++..
T Consensus 551 ~~~l~~~~~~~~~~~~~ 567 (571)
T TIGR02203 551 HNELLARNGLYAQLHNM 567 (571)
T ss_pred HHHHHHcCCHHHHHHHH
Confidence 99999888888887653
No 52
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1e-73 Score=788.73 Aligned_cols=570 Identities=19% Similarity=0.220 Sum_probs=453.5
Q ss_pred cCcccHHHHHHHhhhhhHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHH
Q 000406 327 AKPVGLFSLFKYSTKLDMIL-VLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIV 405 (1560)
Q Consensus 327 ~~~~~~~~l~~y~~~~~~~~-~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 405 (1560)
.+.+++..+..|+....... .++.+++.++..++.....+|++.|.+.... . ....++++|+++.++.
T Consensus 943 ~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~~----~-------~~~~~l~~y~~~~~~~ 1011 (1560)
T PTZ00243 943 SGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSFK----L-------SAATYLYVYLGIVLLG 1011 (1560)
T ss_pred cCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC----C-------CcccHHHHHHHHHHHH
Confidence 34566666666655432222 2222222333334344444555554432110 0 0112445555555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 406 MMGAYLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGY 485 (1560)
Q Consensus 406 ~~~~~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ 485 (1560)
+++.++..++....+.+...++|..++++++++|+.|||++ ++|+++||+++|++.+++.++..+..++..++.+++.+
T Consensus 1012 ~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~-~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~l 1090 (1560)
T PTZ00243 1012 TFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTT-PLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSI 1090 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCC-CccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555665555667778889999999999999999999866 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhH
Q 000406 486 TVGFLRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADS 565 (1560)
Q Consensus 486 ii~~~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~ 565 (1560)
+++++.+|.+.++++.++.+++.+..+|.+..+.+.+......++..+++.|+++|+++||+|++++.+.+++.+..+..
T Consensus 1091 i~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~ 1170 (1560)
T PTZ00243 1091 LVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVV 1170 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHH
Confidence 99898888665555544445555667777777888888888889999999999999999999999999999999988887
Q ss_pred hHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 566 IPFGAKLGFAKGAGMGVIYLVTYATWALAFWYGSIL--VARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAA 643 (1560)
Q Consensus 566 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l--v~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~ 643 (1560)
.+...+......+......++..+..+++.+++... ...+.+++|.+..++.+...+..++..+...+..+++++.++
T Consensus 1171 ~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~ 1250 (1560)
T PTZ00243 1171 YSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSV 1250 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 765554444443333333333333333333333332 234457888887777777778888999999999999999999
Q ss_pred HHHHHHHccCCCCCCCC-------------------------C-CCC---cCCCCcccEEEEEEEEEcCCCCCccccccc
Q 000406 644 TRVFEIIDRVPEIDPYN-------------------------S-EGR---KLSSVSGKIEFKGVTFAYPSRPETVILRSL 694 (1560)
Q Consensus 644 ~Ri~~~l~~~~~~~~~~-------------------------~-~~~---~~~~~~g~i~~~~vs~~y~~~~~~~vL~~i 694 (1560)
+|+.++++..|+++... . ... +.++..|.|+|+||+|+|+.. .+++|+||
T Consensus 1251 eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~-~~~vL~~v 1329 (1560)
T PTZ00243 1251 ERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG-LPLVLRGV 1329 (1560)
T ss_pred HHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-CCceeecc
Confidence 99999997544321000 0 000 011235789999999999753 34699999
Q ss_pred eeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCC
Q 000406 695 NLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKE 774 (1560)
Q Consensus 695 sl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~ 774 (1560)
||+|+|||++||||+||||||||+++|+|+++|++|+|++||+|+++++.+.+|++|+||||||.||+|||||||.++.
T Consensus 1330 sf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~- 1408 (1560)
T PTZ00243 1330 SFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFL- 1408 (1560)
T ss_pred eEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCccc-
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998864
Q ss_pred CCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccC-CCEEEEeCCCCCCCHHHHHHHHHH
Q 000406 775 NATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKD-PRILLLDEPTSALDSESESIVQQA 853 (1560)
Q Consensus 775 ~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~-p~illLDEpts~LD~~~~~~i~~~ 853 (1560)
..++++++++++.++++++|.++|.|+||.+|++|.+|||||||||||||||+++ |+|||||||||+||+++++.|++.
T Consensus 1409 ~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~ 1488 (1560)
T PTZ00243 1409 EASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQAT 1488 (1560)
T ss_pred CCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHH
Confidence 5689999999999999999999999999999999999999999999999999996 899999999999999999999999
Q ss_pred HHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhh-cchHHHHHHHH
Q 000406 854 IDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLER-GGAYHDLVKLA 910 (1560)
Q Consensus 854 l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~-~~~~~~l~~~~ 910 (1560)
|++..+++|+|+||||++++.+||+|+||++|+|+|.|+|+||+++ ++.|+++++..
T Consensus 1489 L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1489 VMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEAL 1546 (1560)
T ss_pred HHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 9999889999999999999999999999999999999999999974 78999998643
No 53
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=8.1e-74 Score=791.42 Aligned_cols=569 Identities=19% Similarity=0.253 Sum_probs=442.6
Q ss_pred cCcccHHHHHHHhhhhh-HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHH
Q 000406 327 AKPVGLFSLFKYSTKLD-MILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIV 405 (1560)
Q Consensus 327 ~~~~~~~~l~~y~~~~~-~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 405 (1560)
.+.+++..+.+|++... ++.+++.+++.++..++.....+|+..|.+... .. ......|+++|++++++.
T Consensus 893 ~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~----~~-----~~~~~~~l~~y~~l~~~~ 963 (1495)
T PLN03232 893 TGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQST----PK-----SYSPGFYIVVYALLGFGQ 963 (1495)
T ss_pred cCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC----CC-----CCCcchHHHHHHHHHHHH
Confidence 44556555555654422 233333333444444444344445544433210 00 011234677888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 406 MMGAYLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGY 485 (1560)
Q Consensus 406 ~~~~~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ 485 (1560)
.++.+++.+++.+.+.++..++|.+++++++++|+.|||++ ++|+++||+++|++.+++.++..+..++..++.+++.+
T Consensus 964 ~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~-~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~ 1042 (1495)
T PLN03232 964 VAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTN-PTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTF 1042 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcC-CchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888899999999999999999999999999866 99999999999999999999999999998888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhH
Q 000406 486 TVGFLRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADS 565 (1560)
Q Consensus 486 ii~~~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~ 565 (1560)
++++++++...++++.+..+++++..++.+..+...+......++..+++.|+++|+++||+|++++.+.+++.+..+..
T Consensus 1043 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~ 1122 (1495)
T PLN03232 1043 ALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNN 1122 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHH
Confidence 88777776544333333333334455566666777777777888999999999999999999999999888887776665
Q ss_pred hHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 566 IPFGAKLGFAKGAGMGVIYLVTYATWALAFWYGSILVA-RKELS-----GGAAIACFFGVNVGGRGLALSLSYFAQFAQG 639 (1560)
Q Consensus 566 ~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~-~g~ls-----~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a 639 (1560)
.+..........+..... ..+..+++++.+...+. .+.+. .+.+..++.+...+..++..+...+..++.+
T Consensus 1123 ~~~~~~~~~~~~wl~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~ 1199 (1495)
T PLN03232 1123 IRFTLANTSSNRWLTIRL---ETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENS 1199 (1495)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 543332221111111111 11112222223333333 23221 2223334444555666788888899999999
Q ss_pred HHHHHHHHHHHccCCCCCCCCCCC--CcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHH
Q 000406 640 TVAATRVFEIIDRVPEIDPYNSEG--RKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTV 717 (1560)
Q Consensus 640 ~~a~~Ri~~~l~~~~~~~~~~~~~--~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTL 717 (1560)
+.|++|+.++++.++|.+...... ...++..|.|+|+||+|+|+.. .+++|+|+||+|+|||++|||||||||||||
T Consensus 1200 ~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~GekvaIVG~SGSGKSTL 1278 (1495)
T PLN03232 1200 LNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKVGVVGRTGAGKSSM 1278 (1495)
T ss_pred HHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEEEEECCCCCCHHHH
Confidence 999999999998755432111111 1112456889999999999632 3569999999999999999999999999999
Q ss_pred HHHHhcCCCCCccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhC
Q 000406 718 FALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISEL 797 (1560)
Q Consensus 718 l~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l 797 (1560)
+++|+|+++|++|+|.|||+|+++++.+.+|++|++|||||.||+|||||||.++. ..++++++++++.++++++++++
T Consensus 1279 ~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~al~~a~l~~~I~~l 1357 (1495)
T PLN03232 1279 LNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWEALERAHIKDVIDRN 1357 (1495)
T ss_pred HHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHHHHHHcCCHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999986 57899999999999999999999
Q ss_pred CCCCCcccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCC
Q 000406 798 PLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNAN 877 (1560)
Q Consensus 798 ~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D 877 (1560)
|+|+||.+|++|.+|||||||||||||||+++|+|||||||||+||+++++.|++.|++..+++|+|+||||++++.+||
T Consensus 1358 p~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~D 1437 (1495)
T PLN03232 1358 PFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCD 1437 (1495)
T ss_pred cCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999999999999989999999999999999999
Q ss_pred EEEEEeCCeEEEecChhhHhhhc-chHHHHHHHH
Q 000406 878 TIVVLDQGSVVEIGNHRQLLERG-GAYHDLVKLA 910 (1560)
Q Consensus 878 ~i~vl~~G~iv~~G~~~~l~~~~-~~~~~l~~~~ 910 (1560)
+|+||++|+|+|.|+|+||++++ +.|+++++.+
T Consensus 1438 rIlVL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~ 1471 (1495)
T PLN03232 1438 KILVLSSGQVLEYDSPQELLSRDTSAFFRMVHST 1471 (1495)
T ss_pred EEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 99999999999999999999876 5899988643
No 54
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=1.1e-72 Score=724.63 Aligned_cols=564 Identities=27% Similarity=0.395 Sum_probs=476.5
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 332 LFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYL 411 (1560)
Q Consensus 332 ~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l 411 (1560)
++++++|.++. +..+++.++++++..++....+++++.++|.+... . ....++++++++.++..+..++
T Consensus 7 ~~~l~~~~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~---~-------~~~~~~~~~~~~~~~~~~~~~~ 75 (588)
T PRK13657 7 YARVLQYLGAE-KRLGILLAVANVLLAAATFAEPILFGRIIDAISGK---G-------DIFPLLAAWAGFGLFNIIAGVL 75 (588)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---c-------cHHHHHHHHHHHHHHHHHHHHH
Confidence 44555655443 33445566666666667777788889999876532 1 0111222222223333333343
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 412 EITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLR 491 (1560)
Q Consensus 412 ~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~ 491 (1560)
...+..+...+...+++.++++++++.|..+|+.. ++|++++|+++|++.+.+.+...+..++..++.+++.+++++.+
T Consensus 76 ~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (588)
T PRK13657 76 VARHADRLAHRRRLAVLTEYFERIIQLPLAWHSQR-GSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFM 154 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHCcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444445556666677799999999999999755 89999999999999999988888888888888888888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhH
Q 000406 492 SWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAK 571 (1560)
Q Consensus 492 s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k 571 (1560)
+|.+++++++++|+.+++..++.+......++..+...+..+.+.|.++|+++||.|+.++.+.+++.+..++..+...+
T Consensus 155 ~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (588)
T PRK13657 155 NWRLSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMP 234 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888888888888888888888888888999999999999999999999999999999999888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000406 572 LGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIID 651 (1560)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~ 651 (1560)
..........+..++..+..++++++|++++.+|.+++|.+++++.++..+..++..+...+..+..+..+++|+.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~ 314 (588)
T PRK13657 235 VLSWWALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVED 314 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 77776666666667777777788899999999999999999999888888888999999999999999999999999987
Q ss_pred cCCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccE
Q 000406 652 RVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGL 731 (1560)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~ 731 (1560)
.+++.+. .......++..+.|+++||+|+|+++ .++|+|+||+++|||+++|+|+||||||||+++|+|+++|++|+
T Consensus 315 ~~~~~~~-~~~~~~~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~ 391 (588)
T PRK13657 315 AVPDVRD-PPGAIDLGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGR 391 (588)
T ss_pred CCcccCC-CCCCCCcCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCE
Confidence 6443211 11111112234579999999999742 45899999999999999999999999999999999999999999
Q ss_pred EEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCC
Q 000406 732 ITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQ 811 (1560)
Q Consensus 732 I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~ 811 (1560)
|.+||+++++++.+.+|++|+||||+|.+|++||+|||.++.++.++++++++++.+++++++.++|.|+||.++++|.+
T Consensus 392 I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~ 471 (588)
T PRK13657 392 ILIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQ 471 (588)
T ss_pred EEECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCC
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEec
Q 000406 812 LSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIG 891 (1560)
Q Consensus 812 LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G 891 (1560)
|||||||||+|||||+++|+|||||||||+||+++++.+.+.|++..+++|+|+||||++.++.||+|++|++|++++.|
T Consensus 472 LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g 551 (588)
T PRK13657 472 LSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESG 551 (588)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeC
Confidence 99999999999999999999999999999999999999999999887799999999999999999999999999999999
Q ss_pred ChhhHhhhcchHHHHHHHH
Q 000406 892 NHRQLLERGGAYHDLVKLA 910 (1560)
Q Consensus 892 ~~~~l~~~~~~~~~l~~~~ 910 (1560)
+|++++++++.|+++++.+
T Consensus 552 ~~~~l~~~~~~y~~l~~~~ 570 (588)
T PRK13657 552 SFDELVARGGRFAALLRAQ 570 (588)
T ss_pred CHHHHHHCCChHHHHHHHh
Confidence 9999998889999988744
No 55
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.8e-72 Score=719.44 Aligned_cols=564 Identities=27% Similarity=0.383 Sum_probs=479.8
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 332 LFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYL 411 (1560)
Q Consensus 332 ~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l 411 (1560)
++++++|+++ .++.++++++++++..++.+..+++++.++|.+.... + . . .++++++++.++..+..++
T Consensus 7 ~~~l~~~l~~-~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~---~---~---~-~~~~~~~~~~~~~~~~~~~ 75 (585)
T TIGR01192 7 YVRALSYLNV-HKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKS---D---V---L-PTLALWAGFGVFNTIAYVL 75 (585)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---c---H---H-HHHHHHHHHHHHHHHHHHH
Confidence 3456666654 3445667777788888888889999999999765321 0 0 0 1111222223333334444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 412 EITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLR 491 (1560)
Q Consensus 412 ~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~ 491 (1560)
...+...+..++..++|.+++++++++|++||+.. ++|++++|+++|++.+.+.+...+..++..++.+++.+++++.+
T Consensus 76 ~~~~~~~~~~~~~~~lr~~~~~~l~~l~~~~~~~~-~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 154 (585)
T TIGR01192 76 VAREADRLAHGRRATLLTEAFGRIISMPLSWHQQR-GTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAM 154 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455556666777799999999999999765 89999999999999999999888888888888888888889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhH
Q 000406 492 SWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAK 571 (1560)
Q Consensus 492 s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k 571 (1560)
+|.+++++++++|+++++...+.+...+..++......+..+.+.|.++|+++||+|+.|+.+.+++.+..++..+...+
T Consensus 155 ~~~l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (585)
T TIGR01192 155 DWRLSIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYP 234 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888888888888887777788888899999999999999999999999999999988887777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000406 572 LGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIID 651 (1560)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~ 651 (1560)
.....+....+..++..+..++++++|++++..|.+++|.+++++.++..+..++..+...+..+..+..+++|+.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~ 314 (585)
T TIGR01192 235 VLDWWALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLED 314 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 66666666666666667777788899999999999999999999888888888899999999999999999999999998
Q ss_pred cCCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccE
Q 000406 652 RVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGL 731 (1560)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~ 731 (1560)
.+++.++. ......+...+.|+++||+|+|++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+
T Consensus 315 ~~~~~~~~-~~~~~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~ 391 (585)
T TIGR01192 315 SVFQREEP-ADAPELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQ 391 (585)
T ss_pred CCccccCC-ccCCCCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCE
Confidence 64432111 1111112234679999999999742 35899999999999999999999999999999999999999999
Q ss_pred EEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCC
Q 000406 732 ITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQ 811 (1560)
Q Consensus 732 I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~ 811 (1560)
|.+||.++++++.+.+|+.++||||+|++|++|++|||.++.++.++++++++++.+++++++.++|+|++|.+|++|.+
T Consensus 392 i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~ 471 (585)
T TIGR01192 392 ILIDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNR 471 (585)
T ss_pred EEECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCC
Confidence 99999999999999999999999999999999999999999887788999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEec
Q 000406 812 LSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIG 891 (1560)
Q Consensus 812 LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G 891 (1560)
|||||||||+|||||+++|+|||||||||+||+++++.+.+.|+++.+++|+|+||||++.+..||+|++|++|++++.|
T Consensus 472 LSgGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g 551 (585)
T TIGR01192 472 LSGGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKG 551 (585)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEEC
Confidence 99999999999999999999999999999999999999999999887899999999999999899999999999999999
Q ss_pred ChhhHhhhcchHHHHHHHH
Q 000406 892 NHRQLLERGGAYHDLVKLA 910 (1560)
Q Consensus 892 ~~~~l~~~~~~~~~l~~~~ 910 (1560)
++++++++++.|++++..+
T Consensus 552 ~~~~l~~~~~~y~~l~~~~ 570 (585)
T TIGR01192 552 SFQELIQKDGRFYKLLRRS 570 (585)
T ss_pred CHHHHHHCCChHHHHHHhC
Confidence 9999999999999998754
No 56
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=3.7e-73 Score=721.05 Aligned_cols=524 Identities=22% Similarity=0.261 Sum_probs=444.7
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 335 LFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLEIT 414 (1560)
Q Consensus 335 l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~ 414 (1560)
+++|.++.. +.+++.+++.++..++....+++++.++|...... . .. ....++..++++.++..++.++..+
T Consensus 4 l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-----~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (529)
T TIGR02868 4 ILPLLQPRT-RRLVVAILLGALALGSAVALLGVSAWLISRAAEMP-----P-VL-YLSVAAVAVRAFGIGRAVFRYLERL 75 (529)
T ss_pred HHHHHHhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-----h-hH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456655433 34456666666677777777888899888754321 0 00 0111111122344555667778888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 415 CWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLRSWK 494 (1560)
Q Consensus 415 ~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~s~~ 494 (1560)
+....+.++..++|.+++++++++|..+|++. ++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.
T Consensus 76 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~-~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 154 (529)
T TIGR02868 76 VGHDAALRSLGRLRVRVYDRLARLALAGRRRF-QTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVP 154 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCccccccC-ChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 88889999999999999999999999999755 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhHHH
Q 000406 495 VSLVVLSVTPLMMFCGMAY-KAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKLG 573 (1560)
Q Consensus 495 l~lv~l~~~pl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k~~ 573 (1560)
+++++++++|+++++...+ .+..+...++..+..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...+..
T Consensus 155 l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (529)
T TIGR02868 155 AALVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAA 234 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998888777776655444 343455556666777888999999999999999999999999999999988888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000406 574 FAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIIDRV 653 (1560)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~~~ 653 (1560)
...+....+..++..+..++++|+|++++.+|.+++|.+++++.+...+..++..+...+..+.++..+.+|+.++++.+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~ 314 (529)
T TIGR02868 235 RATGLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAK 314 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 88777777777777777788889999999999999999999988888888888888889999999999999999999865
Q ss_pred CCCCCCCCC-CCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEE
Q 000406 654 PEIDPYNSE-GRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLI 732 (1560)
Q Consensus 654 ~~~~~~~~~-~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I 732 (1560)
++.+..... ....++..+.|+|+||+|+|+++ +++|+|+||+|++||++|||||||||||||+++|+|+|+|++|+|
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I 392 (529)
T TIGR02868 315 GPRPEGVVPAAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEV 392 (529)
T ss_pred CCcCCCCCCCCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEE
Confidence 542211111 11112234679999999999753 359999999999999999999999999999999999999999999
Q ss_pred EECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCC
Q 000406 733 TLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQL 812 (1560)
Q Consensus 733 ~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~L 812 (1560)
.+||+|++++ .+++|++|+||||+|+||++||+|||.+|.++.++++++++++.+++++++.++|+|+||.+|++|.+|
T Consensus 393 ~i~g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~L 471 (529)
T TIGR02868 393 TLDGVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARL 471 (529)
T ss_pred EECCEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcC
Confidence 9999999999 999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCc
Q 000406 813 SGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRL 870 (1560)
Q Consensus 813 SgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l 870 (1560)
|||||||||||||++++|+|||||||||+||+++++.+++.+++..+++|+|+||||+
T Consensus 472 SGGQrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 472 SGGERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999999999999999999999999988899999999995
No 57
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=2.1e-72 Score=721.98 Aligned_cols=567 Identities=34% Similarity=0.530 Sum_probs=484.6
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 334 SLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLEI 413 (1560)
Q Consensus 334 ~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~ 413 (1560)
.+++|.++. +..+++.+++.++..++....+++++.++|...... + ......++.+++++.++..+..+++.
T Consensus 8 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (576)
T TIGR02204 8 ALWPFVRPY-RGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKD---S----SGLLNRYFAFLLVVALVLALGTAARF 79 (576)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccc---c----HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455555443 344556666677777777788889999998744221 1 11122233334444445556667777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 414 TCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLRSW 493 (1560)
Q Consensus 414 ~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~s~ 493 (1560)
+....++.++..++|..+++++++.|..+|+.. +.|++++|+++|++.+++.+...+..++..++.+++.+++++.++|
T Consensus 80 ~~~~~~~~~~~~~lr~~l~~~l~~~~~~~~~~~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (576)
T TIGR02204 80 YLVTWLGERVVADIRRAVFAHLISLSPSFFDKN-RSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSP 158 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHccC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 788889999999999999999999999999765 8999999999999999999999899989999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhHHH
Q 000406 494 KVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKLG 573 (1560)
Q Consensus 494 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k~~ 573 (1560)
++++++++.+|+++++..++.+......+.......+..+.+.|.++|+++||++++|+.+.++|.+..++..+...+..
T Consensus 159 ~l~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (576)
T TIGR02204 159 KLTSLVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRI 238 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888888888888888888888888888889999999999999999999999999999999888776666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000406 574 FAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIIDRV 653 (1560)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~~~ 653 (1560)
........+..++.++..++.+++|++++..|.+++|.++++..+......++..+...+..+.++..+++|+.++++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~ 318 (576)
T TIGR02204 239 RTRALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAE 318 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 55555555555555566677788899999999999999999988888888899999999999999999999999999864
Q ss_pred CCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEE
Q 000406 654 PEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLIT 733 (1560)
Q Consensus 654 ~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~ 733 (1560)
++.+..........+..+.|+++||+|+|+...++++|+|+||+|+|||+++|+|+||||||||+++|+|+++|++|+|.
T Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~ 398 (576)
T TIGR02204 319 PDIKAPAHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRIL 398 (576)
T ss_pred CcCCCCCCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEE
Confidence 43221111111111224579999999999854335799999999999999999999999999999999999999999999
Q ss_pred ECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCC
Q 000406 734 LDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLS 813 (1560)
Q Consensus 734 i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LS 813 (1560)
+||.++++++...+|++|+||||+|++|++||+|||.++.++.++++++++++.+++.++++.+|.|++|.++++|.+||
T Consensus 399 i~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LS 478 (576)
T TIGR02204 399 LDGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLS 478 (576)
T ss_pred ECCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCC
Confidence 99999999999999999999999999999999999999988778999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecCh
Q 000406 814 GGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNH 893 (1560)
Q Consensus 814 gGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~ 893 (1560)
||||||++||||++++|+|||||||||+||+++++.+.+.++++.+++|+|+||||++.+..||+|++|++|++++.|++
T Consensus 479 gGq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~ 558 (576)
T TIGR02204 479 GGQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTH 558 (576)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecH
Confidence 99999999999999999999999999999999999999999998789999999999999999999999999999999999
Q ss_pred hhHhhhcchHHHHHHH
Q 000406 894 RQLLERGGAYHDLVKL 909 (1560)
Q Consensus 894 ~~l~~~~~~~~~l~~~ 909 (1560)
++++++++.|++++..
T Consensus 559 ~~l~~~~~~~~~l~~~ 574 (576)
T TIGR02204 559 AELIAKGGLYARLARL 574 (576)
T ss_pred HHHHHcCChHHHHHhh
Confidence 9999988999888753
No 58
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.3e-72 Score=719.84 Aligned_cols=540 Identities=25% Similarity=0.384 Sum_probs=467.2
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc
Q 000406 361 LPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLEITCWRLVGERSAQRIRTKYLRAVLRQDI 440 (1560)
Q Consensus 361 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l 440 (1560)
..+.+++++.++|....... + ......++++++++.++..++.++..++....+.+...++|.+++++++++|+
T Consensus 11 ~~~~p~~~~~iid~~~~~~~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~ 84 (569)
T PRK10789 11 QLIPPKVVGIIVDGVTEQHM--T----TGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHP 84 (569)
T ss_pred HHHHHHHHHHHHHHhccCCc--c----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCH
Confidence 34455688888887643211 1 01122334444445555666677777777788999999999999999999999
Q ss_pred hhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 441 AFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVG-FLRSWKVSLVVLSVTPLMMFCGMAYKAVYVG 519 (1560)
Q Consensus 441 ~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~-~~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~ 519 (1560)
.+|+.. ++|++++|+++|++.+...+...+..++..++.+++.++++ ++++|.+++++++++|+++++...+.+...+
T Consensus 85 ~~~~~~-~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 163 (569)
T PRK10789 85 EFYLRH-RTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHE 163 (569)
T ss_pred HHHcCC-CHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999755 89999999999999999888777777777766666665555 5799999999988889988888888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 520 LTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKLGFAKGAGMGVIYLVTYATWALAFWYGS 599 (1560)
Q Consensus 520 ~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 599 (1560)
..++.++..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...+.....+....+..++..+..++++++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 243 (569)
T PRK10789 164 RFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGS 243 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777888888999999999999999999999999999999988887777777777776666666666667777888999
Q ss_pred HHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcCCCCcccEEEEEEE
Q 000406 600 ILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIIDRVPEIDPYNSEGRKLSSVSGKIEFKGVT 679 (1560)
Q Consensus 600 ~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~vs 679 (1560)
+++.+|.+++|.++++..+...+..|+..+...+..+..+..+.+|+.++++.+++.++ .....+...+.|+++|++
T Consensus 244 ~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~---~~~~~~~~~~~I~~~~v~ 320 (569)
T PRK10789 244 WMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKD---GSEPVPEGRGELDVNIRQ 320 (569)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccC---CCCCCCCCCCcEEEEEEE
Confidence 99999999999999999888888889999999999999999999999999986543221 111122235679999999
Q ss_pred EEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEEEEecCCc
Q 000406 680 FAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPI 759 (1560)
Q Consensus 680 ~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~ 759 (1560)
|+|+.. +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+||+++.+++...+|+.|+||+|+|+
T Consensus 321 ~~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~ 399 (569)
T PRK10789 321 FTYPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPF 399 (569)
T ss_pred EECCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCe
Confidence 999743 3569999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCC
Q 000406 760 LFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPT 839 (1560)
Q Consensus 760 lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpt 839 (1560)
+|++|++|||.++.++.++++++++++.+++++++.++|+|++|.+|++|.+||||||||++||||++++|+||||||||
T Consensus 400 lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpt 479 (569)
T PRK10789 400 LFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDAL 479 (569)
T ss_pred eccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECcc
Confidence 99999999999998878899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhhcchHHHHHHHHH
Q 000406 840 SALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLERGGAYHDLVKLAS 911 (1560)
Q Consensus 840 s~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~~~~~~~l~~~~~ 911 (1560)
|+||+++++.+.+.|+++.+++|+|+||||++.+..||+|++|++|++++.|++++++++++.|++++..+.
T Consensus 480 s~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~~ 551 (569)
T PRK10789 480 SAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYRDMYRYQQ 551 (569)
T ss_pred ccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHHHHHHHhh
Confidence 999999999999999988789999999999999999999999999999999999999999999999987653
No 59
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=8.1e-73 Score=717.98 Aligned_cols=525 Identities=24% Similarity=0.327 Sum_probs=449.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 992 MIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGWAGTKLTMRVRE 1071 (1560)
Q Consensus 992 ~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~Lr~ 1071 (1560)
.+.++++++++.+++....|++++.+++....... .......+.+.++++.++..++.++..++....+.++..++|.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~ 81 (529)
T TIGR02857 4 ALALLGLLGALGALLIIAQAWLLARVIDGLISAGE--PLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRE 81 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666677777777888888888876531111 1122333445555566677788888889999999999999999
Q ss_pred HHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1072 LLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTLVAAALTPFTLG 1151 (1560)
Q Consensus 1072 ~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~lv~l~~ipl~~~ 1151 (1560)
.+|+++++.|+.||+ +.++|++++|+++|++.+++.+...+..++..++..++++++++.++|.+++++++.+|++++
T Consensus 82 ~l~~~l~~~~~~~~~--~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~ 159 (529)
T TIGR02857 82 RLLAAVAALGPGWLQ--GRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPI 159 (529)
T ss_pred HHHHHHHhCCchhhc--cCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 999999999999986 789999999999999999999999999999999999999999999999999998888887765
Q ss_pred HHHHHH-HHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1152 ASYLSL-IINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILGLTLGFSQGAMY 1230 (1560)
Q Consensus 1152 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1230 (1560)
+.++.. ......+..+....+..+.+.|.++|+++||+|+.++.+.++|++..++..+...+..+.......+..++..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02857 160 FMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFAT 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544332 2222233335566778899999999999999999999999999999999888888877777777666666666
Q ss_pred HHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCccccccccccCCCC
Q 000406 1231 VAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLIDNVKGRKLERSK 1310 (1560)
Q Consensus 1231 ~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~~~~~~~~~~~~~ 1310 (1560)
+..+++..++++.+..|.+++|.+++++.+......|+..+...+..+..+..+.+|+.++++.+++..+.. ..+.+.
T Consensus 240 ~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~--~~~~~~ 317 (529)
T TIGR02857 240 LSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA--PVTAAP 317 (529)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc--CCCCCC
Confidence 666666666667777999999999999888888999999999999999999999999999987543221111 111112
Q ss_pred CccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhh
Q 000406 1311 PLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRK 1390 (1560)
Q Consensus 1311 ~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~ 1390 (1560)
.+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|+
T Consensus 318 ~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~ 396 (529)
T TIGR02857 318 APSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRD 396 (529)
T ss_pred CCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHh
Confidence 3469999999999854 346999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccC
Q 000406 1391 QTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKG 1470 (1560)
Q Consensus 1391 ~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~ 1470 (1560)
+++||||||++|++||||||.++.++.++++++++++.+++++++.++|+||||++||+|.+|||||||||+|||||+++
T Consensus 397 ~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~ 476 (529)
T TIGR02857 397 QIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRD 476 (529)
T ss_pred heEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999888899999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEE
Q 000406 1471 SRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVV 1523 (1560)
Q Consensus 1471 p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVL 1523 (1560)
|+|||||||||+||++||+.|++.|++..+++|+|+||||+++++.||+|+||
T Consensus 477 ~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 477 APLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 99999999999999999999999999988899999999999999999999986
No 60
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.6e-75 Score=663.66 Aligned_cols=489 Identities=31% Similarity=0.414 Sum_probs=421.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 000406 1057 FCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGV-SLVLN 1135 (1560)
Q Consensus 1057 ~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~-~~~~~ 1135 (1560)
++..+++.+...+--..|.|+.++++.|.- ++.+|-+..-+......++..+...+...+..++-+....++ ...++
T Consensus 5 ~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl--~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~ 82 (497)
T COG5265 5 LFSPVGQIAVRVLAYVTFFHLHSLSLRFHL--ERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYG 82 (497)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhcchhhhh--hcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcc
Confidence 345566777778888899999999998854 566666655554444455555555555555555544444333 44578
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcchh-hhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHH
Q 000406 1136 WRLTLVAAALTPFTLGASYLSLIINVGPK-IDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKR 1214 (1560)
Q Consensus 1136 ~~l~lv~l~~ipl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~ 1214 (1560)
|+++++.++++.+++.+.....-.+...+ ....+.+.++....+++-+.+++|.|+.|+.+..+|+..++.+.++..+.
T Consensus 83 ~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~ 162 (497)
T COG5265 83 WWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKV 162 (497)
T ss_pred cHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHH
Confidence 99999888877766655443222222223 33667788889999999999999999999999999999999999998887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcc
Q 000406 1215 SQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKR 1294 (1560)
Q Consensus 1215 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~ 1294 (1560)
.....+.......++..........+...+..|++|.|+++..-.++...+.|+..+...+.++.++.+.+++++++.+.
T Consensus 163 ~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~ 242 (497)
T COG5265 163 HVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDV 242 (497)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhcc
Confidence 77777766666666777777778888899999999999999999999999999999999999999999999999999988
Q ss_pred CCccccccccccCC-CCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEE
Q 000406 1295 KPLIDNVKGRKLER-SKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKV 1373 (1560)
Q Consensus 1295 ~~~~~~~~~~~~~~-~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I 1373 (1560)
+.+..+....++-+ ...+.+.|++|+|.|.. .+++|+++||++++|+++||||+||+||||++++|+|||++++|.|
T Consensus 243 ~~~v~d~pda~~L~~~~~g~v~F~~V~F~y~~--~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I 320 (497)
T COG5265 243 EAEVSDAPDAPPLWPVRLGAVAFINVSFAYDP--RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSI 320 (497)
T ss_pred chhhccCCCCccccccccceEEEEEEEeeccc--cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceE
Confidence 77665543333333 44677999999999964 4679999999999999999999999999999999999999999999
Q ss_pred EECCEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCC
Q 000406 1374 MIEGVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQL 1453 (1560)
Q Consensus 1374 ~IdGvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~L 1453 (1560)
.|||.|++++..+.+|+.||+||||..||+.|+..|+.+|+|+++++|++.|++.+.+++||.++|+||||.|||.|-.|
T Consensus 321 ~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerglkl 400 (497)
T COG5265 321 TIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKL 400 (497)
T ss_pred EEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecC
Q 000406 1454 SGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGS 1533 (1560)
Q Consensus 1454 SGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt 1533 (1560)
|||||||+||||+||++|+||+||||||+||..||++||.+|++..+++|.++|||||+||.+||.|+||++|+|+|.|+
T Consensus 401 Sggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~ 480 (497)
T COG5265 401 SGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGT 480 (497)
T ss_pred cCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccChHHHHHHH
Q 000406 1534 HETLLASHLNGVYASLVR 1551 (1560)
Q Consensus 1534 ~~eLl~~~~~g~y~~l~~ 1551 (1560)
|+||++ .+|.|++||.
T Consensus 481 h~~ll~--~~g~ya~mw~ 496 (497)
T COG5265 481 HEELLA--AGGLYAEMWR 496 (497)
T ss_pred HHHHHH--cCChHHHHhc
Confidence 999998 5999999996
No 61
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.7e-75 Score=660.62 Aligned_cols=502 Identities=29% Similarity=0.415 Sum_probs=423.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 406 MMGAYLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGY 485 (1560)
Q Consensus 406 ~~~~~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ 485 (1560)
.+..-++.++|..+.+...+++-..+|+|+..+.++|+-.+ .+|+++..+....+.+. ++...+.++.-.++-+++++
T Consensus 273 G~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL~r-rtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~ 350 (790)
T KOG0056|consen 273 GFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHLNR-RTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAM 350 (790)
T ss_pred cchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeeecc-cccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhh
Confidence 45556777888888999999999999999999999999655 89998887776655554 44444444443444444443
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHh
Q 000406 486 TVG-FLRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLAD 564 (1560)
Q Consensus 486 ii~-~~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~ 564 (1560)
+.. ..++||.++++++++.+++.+.........+.+++......+......+++-|.+|||.|++|++..++|.+...+
T Consensus 351 vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~ 430 (790)
T KOG0056|consen 351 VYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILK 430 (790)
T ss_pred hhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHH
Confidence 332 3468999999888887777665555555555666665556666667779999999999999999999999999988
Q ss_pred HhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 565 SIPFGAKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAAT 644 (1560)
Q Consensus 565 ~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~ 644 (1560)
+++...|......+....-..+..+...+...+.+|+|..+.+++|+.+.+..+++...+|+......+..++++.+-++
T Consensus 431 Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmE 510 (790)
T KOG0056|consen 431 YQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDME 510 (790)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHH
Confidence 88766664433333222222222233333334455667788999999999999999999999999999999999999999
Q ss_pred HHHHHHccCCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcC
Q 000406 645 RVFEIIDRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERF 724 (1560)
Q Consensus 645 Ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~ 724 (1560)
+++++++++||..+.+ ...+....+|.|+|+||+|.|.. .+++|+||||+++||+.+|||||||+||||++++|.|+
T Consensus 511 nmfdllkee~eVvd~P-~a~pl~~~~G~i~fsnvtF~Y~p--~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRf 587 (790)
T KOG0056|consen 511 NMFDLLKEEPEVVDLP-GAPPLKVTQGKIEFSNVTFAYDP--GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRF 587 (790)
T ss_pred HHHHHhhcCchhhcCC-CCCCccccCCeEEEEEeEEecCC--CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHH
Confidence 9999999877764432 22223346799999999999963 57899999999999999999999999999999999999
Q ss_pred CCCCccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcc
Q 000406 725 YDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQ 804 (1560)
Q Consensus 725 ~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~ 804 (1560)
++.++|+|.|||+||+......+|+.||+||||..||++||..||.++++.++++++.+|++.+++||.|..+|+||+|.
T Consensus 588 fdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~ 667 (790)
T KOG0056|consen 588 FDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTR 667 (790)
T ss_pred hhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeC
Q 000406 805 VGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQ 884 (1560)
Q Consensus 805 ~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~ 884 (1560)
+||+|-.|||||||||||||+++++|.|++|||+|||||..+|+.|+.++.++..++|.|+|+||++++-+||.|+|+++
T Consensus 668 VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~ 747 (790)
T KOG0056|consen 668 VGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISN 747 (790)
T ss_pred hhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEecChhhHhhh-cchHHHHHHHHHh
Q 000406 885 GSVVEIGNHRQLLER-GGAYHDLVKLASE 912 (1560)
Q Consensus 885 G~iv~~G~~~~l~~~-~~~~~~l~~~~~~ 912 (1560)
|+|+|.|+|+||+.+ +|.|++||+.++.
T Consensus 748 G~IvErG~HeeLl~rdgG~Ya~MWq~qqa 776 (790)
T KOG0056|consen 748 GRIVERGRHEELLKRDGGAYADMWQAQQA 776 (790)
T ss_pred CeEeecCcHHHHHhccCCcHHHHHHHHHh
Confidence 999999999999987 7999999986654
No 62
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=8.1e-74 Score=687.99 Aligned_cols=482 Identities=28% Similarity=0.448 Sum_probs=366.8
Q ss_pred cEEEEEEEEEcCCCCC-ccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCC----ccEEEECCeecCCccHHH
Q 000406 672 KIEFKGVTFAYPSRPE-TVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPT----KGLITLDGHDLKSLQVKW 746 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~-~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~----~G~I~i~g~~i~~~~~~~ 746 (1560)
-++++|++..|..... ..+++||||+|.+||++||||+|||||||+.++|.|+.++. +|+|.++|.|+..++...
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 5899999999975532 25899999999999999999999999999999999999887 899999999998887654
Q ss_pred H---h-ccEEEEecCCc-Cccc--cHHHHHh----cCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCccc--CCCCCCCC
Q 000406 747 L---R-TQIGMVGQEPI-LFAT--SILENVL----MGKENATMKEAVAACKAASAHSFISELPLGYDTQV--GDRGTQLS 813 (1560)
Q Consensus 747 l---r-~~i~~v~Q~~~-lf~~--Tv~eNi~----~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~--~~~g~~LS 813 (1560)
+ | ++|+||||+|. .++. ||.+-|. ..... +.++.. ..+.+.++.. |+.... +..+.+||
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~-~~~ea~-----~~a~elL~~V--gl~~~~~~~~yPheLS 156 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKG-SRAEAR-----KRAVELLEQV--GLPDPERRDRYPHQLS 156 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccc-cHHHHH-----HHHHHHHHHc--CCCChhhhccCCcccC
Confidence 4 3 47999999985 4543 6655543 22111 111111 1112223322 222222 45789999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEe
Q 000406 814 GGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEI 890 (1560)
Q Consensus 814 gGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~ 890 (1560)
||||||+.||+||+.+|++||+||||++||+.++..|.+.|+++. .|.++|+|||++..+.+ ||||+||++|+++|.
T Consensus 157 GG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~ 236 (539)
T COG1123 157 GGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVET 236 (539)
T ss_pred chHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEe
Confidence 999999999999999999999999999999999999999999884 58999999999999977 999999999999999
Q ss_pred cChhhHhhhcc-hHHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhhHhhh
Q 000406 891 GNHRQLLERGG-AYHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQTVEEEQ 969 (1560)
Q Consensus 891 G~~~~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 (1560)
|+.++++.+.. .|....-
T Consensus 237 G~~~~i~~~p~hpYT~~Ll------------------------------------------------------------- 255 (539)
T COG1123 237 GPTEEILSNPQHPYTRGLL------------------------------------------------------------- 255 (539)
T ss_pred cCHHHHHhccCCcccHHHH-------------------------------------------------------------
Confidence 99999875321 1100000
Q ss_pred hCCCCchhhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHH
Q 000406 970 QKPRPRKFQLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCII 1049 (1560)
Q Consensus 970 ~~~~~~~~~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 1049 (1560)
.
T Consensus 256 --------------~----------------------------------------------------------------- 256 (539)
T COG1123 256 --------------A----------------------------------------------------------------- 256 (539)
T ss_pred --------------h-----------------------------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1050 FMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLG 1129 (1560)
Q Consensus 1050 ~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~ 1129 (1560)
.-+. .+.. ...
T Consensus 257 ------------------------------a~p~-~~~~-~~~------------------------------------- 267 (539)
T COG1123 257 ------------------------------AVPR-LGDE-KII------------------------------------- 267 (539)
T ss_pred ------------------------------hCCC-cccc-ccc-------------------------------------
Confidence 0000 0000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHH
Q 000406 1130 VSLVLNWRLTLVAAALTPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKK 1209 (1560)
Q Consensus 1130 ~~~~~~~~l~lv~l~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~ 1209 (1560)
T Consensus 268 -------------------------------------------------------------------------------- 267 (539)
T COG1123 268 -------------------------------------------------------------------------------- 267 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 000406 1210 KSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVL 1289 (1560)
Q Consensus 1210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~ 1289 (1560)
T Consensus 268 -------------------------------------------------------------------------------- 267 (539)
T COG1123 268 -------------------------------------------------------------------------------- 267 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhccCCccccccccccCCCCCccEEEEEEEEEcCCC--------CCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHH
Q 000406 1290 QITKRKPLIDNVKGRKLERSKPLGIELKMVTFTYPSR--------PEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWL 1361 (1560)
Q Consensus 1290 ~i~~~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~--------~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~l 1361 (1560)
..+. .. ......-++++||+.+|..+ ....+++||||+|++||++||||+||||||||.++
T Consensus 268 ----~~~~----~~---~~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~ 336 (539)
T COG1123 268 ----RLPR----RG---PLRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARI 336 (539)
T ss_pred ----cccc----cc---ccccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHH
Confidence 0000 00 00012248899999999742 13468999999999999999999999999999999
Q ss_pred HhcccCCCccEEEECCEe--cCCCCHHHHhhceEEEcCCCC--CC-CccHHHHHhcCC---CCC----CHHHHHHHHHHH
Q 000406 1362 IQRFYDPNQGKVMIEGVD--LREINVKWLRKQTALVGQEPA--LF-AGTIRDNIALGN---PKA----SWAEIEEAAEEA 1429 (1560)
Q Consensus 1362 L~rl~~p~~G~I~IdGvd--i~~i~l~~LR~~I~~VpQdp~--LF-~gTIreNL~~g~---~~~----sd~eI~~al~~a 1429 (1560)
|+|+++|++|.|.++|.| ++.-....+|+++-+|+|||+ |- ..||+++|.-.- ... ..+.+.+.++.+
T Consensus 337 i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~V 416 (539)
T COG1123 337 LAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELV 416 (539)
T ss_pred HhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHc
Confidence 999999999999999977 333335668889999999997 33 369999986321 111 112355556666
Q ss_pred hHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEE
Q 000406 1430 YIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVV 1507 (1560)
Q Consensus 1430 ~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~I 1507 (1560)
+|.+- .+......||||||||+||||||..+|+|||+|||||+||+.+.++|.+.|+++.+ +.|.|+|
T Consensus 417 gL~~~----------~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfI 486 (539)
T COG1123 417 GLPPE----------FLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFI 486 (539)
T ss_pred CCCHH----------HHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 65531 23344557999999999999999999999999999999999999999999998754 5899999
Q ss_pred ecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhhccChHHHHHHHH
Q 000406 1508 AHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLASHLNGVYASLVRA 1552 (1560)
Q Consensus 1508 AHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~~l~~~ 1552 (1560)
||+++.++. ||||+||++|+|||.|+.+++.+. ....|.+...+
T Consensus 487 SHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~-p~h~Ytr~L~~ 531 (539)
T COG1123 487 SHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFEN-PQHPYTRKLLA 531 (539)
T ss_pred eCCHHHHHhhCceEEEEECCeEEEeCCHHHHhcC-CCChHHHHHHH
Confidence 999999988 999999999999999999998874 56667665443
No 63
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.3e-71 Score=704.30 Aligned_cols=536 Identities=23% Similarity=0.293 Sum_probs=450.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 990 FAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGWAGTKLTMRV 1069 (1560)
Q Consensus 990 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L 1069 (1560)
++.++..++++++..++....|+++..+++....... ......+.++++++.++..++.+++.++....+.++..++
T Consensus 5 k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 81 (544)
T TIGR01842 5 KSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS---VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGAL 81 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445556666666777777788888888776542211 1122333444444555566777888888889999999999
Q ss_pred HHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1070 RELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTLVAAALTPFT 1149 (1560)
Q Consensus 1070 r~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~lv~l~~ipl~ 1149 (1560)
|..+|+++++.|+.. .+...+++.+|++.+++.+.......+...+..++.++++++++|.+++++++.+|++
T Consensus 82 r~~~~~~ll~~~~~~-------~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l~~~~l~ 154 (544)
T TIGR01842 82 NQPIFAASFSATLRR-------GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYLLVCFLLHPWIGILALGGAVVL 154 (544)
T ss_pred HHHHHHHHhcCcccC-------ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 999999999998742 3567889999999999988774444443444444455678899999999888777766
Q ss_pred HHHHHHHHHH-hcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 000406 1150 LGASYLSLII-NVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILGLTLGFSQGA 1228 (1560)
Q Consensus 1150 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1228 (1560)
++..++.... ....+..+....+..+.+.|+++|+++||+|+.++.+.++|++..++..+...+.....+....+...+
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (544)
T TIGR01842 155 VGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYF 234 (544)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5544333222 222233355667778999999999999999999999999999999998888888887777777777777
Q ss_pred HHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCccccccccccCC
Q 000406 1229 MYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLIDNVKGRKLER 1308 (1560)
Q Consensus 1229 ~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~~~~~~~~~~~ 1308 (1560)
..+..++++++|++++..|.+++|.+++++.+......|+..+...+..+..+..+.+|+.++++.+++.+.. ...+
T Consensus 235 ~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~--~~~~- 311 (544)
T TIGR01842 235 RIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA--MPLP- 311 (544)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC--CCCC-
Confidence 7777888889999999999999999999999999999999999999999999999999999998765443211 1111
Q ss_pred CCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHH
Q 000406 1309 SKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWL 1388 (1560)
Q Consensus 1309 ~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~L 1388 (1560)
...+.|+++||+|+|++. +.++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+.+++.+.+
T Consensus 312 ~~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~ 390 (544)
T TIGR01842 312 EPEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETF 390 (544)
T ss_pred CCCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHH
Confidence 123469999999999753 3469999999999999999999999999999999999999999999999999999999999
Q ss_pred hhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHc
Q 000406 1389 RKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAIL 1468 (1560)
Q Consensus 1389 R~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALL 1468 (1560)
|++++||||||.+|++||||||.++.+++++++++++++.+++++++.++|+|+||.+||+|.+|||||||||||||||+
T Consensus 391 ~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall 470 (544)
T TIGR01842 391 GKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALY 470 (544)
T ss_pred hhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHh
Confidence 99999999999999999999999877778999999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000406 1469 KGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1469 r~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
++|+|||||||||+||+++++.|.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|+||++
T Consensus 471 ~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 471 GDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred cCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 9999999999999999999999999999875 6799999999999999999999999999999999999986
No 64
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=2e-71 Score=766.26 Aligned_cols=510 Identities=18% Similarity=0.223 Sum_probs=423.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 395 CLLMTVLAAIVMMGAYLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHF 474 (1560)
Q Consensus 395 ~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~ 474 (1560)
++++++++++..++.+++.+++.+.+.++..++|.+++++++++|+.||++. ++|+++|||++|++.+++.++..+..+
T Consensus 928 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~-~~G~ilnRfs~Di~~id~~l~~~~~~~ 1006 (1490)
T TIGR01271 928 FYIYVGTADSVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNTM-KAGRILNRFTKDMAIIDDMLPLTLFDF 1006 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444445556667777778888999999999999999999999999866 999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHH
Q 000406 475 AHNIFTFICGYTVGFLRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHF 554 (1560)
Q Consensus 475 i~~i~~~i~~~ii~~~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~ 554 (1560)
+..++.+++.++++++++|++++++++++++++++..+|.+..+.+.+......++..+++.|++.|+.+||+|++++.+
T Consensus 1007 ~~~~~~~i~~l~~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~ 1086 (1490)
T TIGR01271 1007 IQLTLIVLGAIFVVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYF 1086 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHH
Confidence 99999999999999999998877666666666667778888888888888888899999999999999999999999999
Q ss_pred HHHHHHHHHhHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 555 AVRYAGLLADSIPFGAKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFA 634 (1560)
Q Consensus 555 ~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~ 634 (1560)
.+++.+..+...+..........+......++..+..+++.++ .+....++.|.+..++.+...+..++..++..+.
T Consensus 1087 ~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l---~~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~ 1163 (1490)
T TIGR01271 1087 ETLFHKALNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFI---AIGTNQDGEGEVGIILTLAMNILSTLQWAVNSSI 1163 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998886543322222222111111111111111111111 1111223445555555555566667888888899
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCCCCC----------------CCcCCCCcccEEEEEEEEEcCCCCCccccccceeEe
Q 000406 635 QFAQGTVAATRVFEIIDRVPEIDPYNSE----------------GRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVI 698 (1560)
Q Consensus 635 ~~~~a~~a~~Ri~~~l~~~~~~~~~~~~----------------~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i 698 (1560)
+++.++.|++|+.++++.+++....... ....++..|.|+|+||+|+|+.. .+++|+||||+|
T Consensus 1164 ~le~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I 1242 (1490)
T TIGR01271 1164 DVDGLMRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSV 1242 (1490)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEE
Confidence 9999999999999999765543211000 00112346889999999999753 357999999999
Q ss_pred cCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCH
Q 000406 699 PSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATM 778 (1560)
Q Consensus 699 ~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~ 778 (1560)
+|||++||||+||||||||+++|+|+++ .+|+|+|||+|+++++.+.+|++|+||||+|.||+||||+||.+.. ..++
T Consensus 1243 ~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~td 1320 (1490)
T TIGR01271 1243 EGGQRVGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSD 1320 (1490)
T ss_pred cCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCH
Confidence 9999999999999999999999999997 7999999999999999999999999999999999999999998764 4689
Q ss_pred HHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc
Q 000406 779 KEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS 858 (1560)
Q Consensus 779 ~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~ 858 (1560)
++++++++.+++++++.++|.|+||.++++|.+|||||||||||||||+++|+|||||||||+||+++++.|++.|++..
T Consensus 1321 eei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~ 1400 (1490)
T TIGR01271 1321 EEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF 1400 (1490)
T ss_pred HHHHHHHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhhcchHHHHHHHHH
Q 000406 859 VGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLERGGAYHDLVKLAS 911 (1560)
Q Consensus 859 ~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~~~~~~~l~~~~~ 911 (1560)
+++|||+||||++++.+||+|+||++|+|+|.|+|++|+++++.|+++++...
T Consensus 1401 ~~~TvI~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~~~~f~~l~~~~~ 1453 (1490)
T TIGR01271 1401 SNCTVILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNETSLFKQAMSAAD 1453 (1490)
T ss_pred CCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcCCcHHHHHHHHhC
Confidence 99999999999999999999999999999999999999988899999987554
No 65
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=6e-71 Score=700.87 Aligned_cols=526 Identities=23% Similarity=0.325 Sum_probs=452.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 346 LVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLEITCWRLVGERSAQ 425 (1560)
Q Consensus 346 ~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~ 425 (1560)
.++++++++++.+++.+..+++.++++|...... .. ......+++++++++++..++.++..+...+++.+...
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (529)
T TIGR02857 4 ALALLGLLGALGALLIIAQAWLLARVIDGLISAG--EP----LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKS 77 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC--CC----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456667777777778888889999999764111 10 12233345555666677778888888889999999999
Q ss_pred HHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 426 RIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLRSWKVSLVVLSVTPL 505 (1560)
Q Consensus 426 ~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~s~~l~lv~l~~~pl 505 (1560)
++|.+++++++++|..+|+.. ++|++++|+++|++.+++.+...+..++..++.+++.+++++.++|.+++++++++|+
T Consensus 78 ~lr~~l~~~l~~~~~~~~~~~-~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l 156 (529)
T TIGR02857 78 QLRERLLAAVAALGPGWLQGR-PSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPL 156 (529)
T ss_pred HHHHHHHHHHHhCCchhhccC-ChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 999999999999999999755 8999999999999999999998889999998888888999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhHHHHHHHHHHHHHHH
Q 000406 506 MMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKLGFAKGAGMGVIYL 585 (1560)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 585 (1560)
+.++...+.+......++..+..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...+..........+..+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (529)
T TIGR02857 157 IPIFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLEL 236 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777777777777777788888889999999999999999999999999999998888777666666665555555555
Q ss_pred HHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCc
Q 000406 586 VTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIIDRVPEIDPYNSEGRK 665 (1560)
Q Consensus 586 ~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~~~~~~~~~~~~~~~ 665 (1560)
+..+..+++..++++.+..|.++.|.++++..+......++..+...+..+.++..+++|+.++++.+++..+ ....
T Consensus 237 ~~~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~---~~~~ 313 (529)
T TIGR02857 237 FATLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAG---KAPV 313 (529)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC---CcCC
Confidence 5555555544555666668999999999988888788888888888999999999999999999985332111 1111
Q ss_pred CCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHH
Q 000406 666 LSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVK 745 (1560)
Q Consensus 666 ~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~ 745 (1560)
..+..+.|+++||+|+|++. ++++|+|+||+|+|||+++|+||||||||||+++|+|+++|++|+|.+||.|+++++.+
T Consensus 314 ~~~~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~ 392 (529)
T TIGR02857 314 TAAPAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADAD 392 (529)
T ss_pred CCCCCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHH
Confidence 11123579999999999853 24689999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHH
Q 000406 746 WLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARA 825 (1560)
Q Consensus 746 ~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARA 825 (1560)
++|++|+||+|+|++|++||+|||.++.+..++++++++++.++++++++++|+|+||.+|++|.+||||||||++||||
T Consensus 393 ~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRa 472 (529)
T TIGR02857 393 SWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARA 472 (529)
T ss_pred HHHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHH
Confidence 99999999999999999999999999988788999999999999999999999999999999999999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEE
Q 000406 826 MIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVL 882 (1560)
Q Consensus 826 l~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl 882 (1560)
++++|+|||||||||+||+++++.+.+.++++.+++|+|+||||++.++.||+|++|
T Consensus 473 l~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 473 FLRDAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred HhcCCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999999988899999999999999999999986
No 66
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.7e-71 Score=651.13 Aligned_cols=543 Identities=27% Similarity=0.367 Sum_probs=442.6
Q ss_pred HhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000406 358 GGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLEITCWRLVGERSAQRIRTKYLRAVLR 437 (1560)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lr~~l~~~ll~ 437 (1560)
-......+.++...++...... ... .........+..|+++.+...++..++...+.++.+++....-.++|++++.
T Consensus 43 K~l~v~vp~~~~~~id~l~~~~--~~~-a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ 119 (591)
T KOG0057|consen 43 KILNVQVPFIFKLIIDGLNDAD--GNP-AVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMS 119 (591)
T ss_pred hHhheehHHHHHHHHhhhhhcc--cCc-chhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444555667777777664111 111 1122233456667778888889999999999999999999999999999999
Q ss_pred cCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 438 QDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGY-TVGFLRSWKVSLVVLSVTPLMMFCGMAYKAV 516 (1560)
Q Consensus 438 ~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~-ii~~~~s~~l~lv~l~~~pl~~~~~~~~~~~ 516 (1560)
+++++|.+. .+|++.+.+..-...|.+.+...+..++..++-+.... ++..-+.+..+++++..+..+..+......+
T Consensus 120 ld~~~~~~~-~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~ 198 (591)
T KOG0057|consen 120 LDLSFFLSR-GTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRW 198 (591)
T ss_pred hhHHhhcCC-CcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhH
Confidence 999999755 89999999999988888888776666665555443332 2222334444444444444444444445555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 517 YVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKLGFAKGAGMGVIYLVTYATWALAFW 596 (1560)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~ 596 (1560)
..+.+.+...+...+.+.+.+.|.|.++||+|+-|+++.++|...+.+....+.+.....++....-.++.....+.+.+
T Consensus 199 Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~ 278 (591)
T KOG0057|consen 199 RNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMV 278 (591)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 56667777778888889999999999999999999999999999998887776665554444333333333344444555
Q ss_pred HHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcCCCCcccEEEE
Q 000406 597 YGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIIDRVPEIDPYNSEGRKLSSVSGKIEFK 676 (1560)
Q Consensus 597 ~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~ 676 (1560)
++..-+..+.++.|.++.....+.....++..+...+..+.+++.-+.-++...+....+. ....+....++.|+|+
T Consensus 279 l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~---~~~~~i~~~~~~I~F~ 355 (591)
T KOG0057|consen 279 LGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQ---EAALPIELFGGSIEFD 355 (591)
T ss_pred HHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhh---hccCCcccCCCcEEEE
Confidence 6666677889999999988888888888888888888888888887777766544322111 1111223356789999
Q ss_pred EEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEEEEec
Q 000406 677 GVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQ 756 (1560)
Q Consensus 677 ~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q 756 (1560)
||+|+|+. ++++|+++||+|++||+|||||+|||||||++++|+|+++ ++|+|+|||+|+++++++.+|+-||||||
T Consensus 356 dV~f~y~~--k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQ 432 (591)
T KOG0057|consen 356 DVHFSYGP--KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQ 432 (591)
T ss_pred eeEEEeCC--CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCC
Confidence 99999973 4669999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred CCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCCCEEEEe
Q 000406 757 EPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRILLLD 836 (1560)
Q Consensus 757 ~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~illLD 836 (1560)
|..||++||.+||.+|++..+++++.++|+.+++||.+.++|+||+|.+||+|..|||||||||+||||++++|+|++||
T Consensus 433 d~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~D 512 (591)
T KOG0057|consen 433 DSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLD 512 (591)
T ss_pred cccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhhcchHHHHHHHH
Q 000406 837 EPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLERGGAYHDLVKLA 910 (1560)
Q Consensus 837 Epts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~~~~~~~l~~~~ 910 (1560)
||||+||.+||+.+.+.|.....++|+|+|.||++++++||+|++|++|++.|.|+|+||++..+.|.++|..+
T Consensus 513 EaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~s~~~~~~w~~~ 586 (591)
T KOG0057|consen 513 EATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAPSELYADLWTTQ 586 (591)
T ss_pred CcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhhhhHHHHHhccc
Confidence 99999999999999999999888999999999999999999999999999999999999999888999998654
No 67
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=7.1e-71 Score=645.90 Aligned_cols=561 Identities=22% Similarity=0.322 Sum_probs=455.5
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 336 FKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLEITC 415 (1560)
Q Consensus 336 ~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~ 415 (1560)
++.+++ .++.++++++.+++..+.....-..-|+++..-..... . ..-.+.......=++++...+..|.+...
T Consensus 8 i~l~~~-~~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~----~-~~f~~~~p~a~VR~~aI~Rt~~RY~ERlv 81 (573)
T COG4987 8 LRLYKR-HKFGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGL----A-YIFNVMLPSAGVRGLAILRTAARYVERLV 81 (573)
T ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccH----H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344444 44556666666666655555544455666654332110 0 01111122233345667777888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 416 WRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLRSWKV 495 (1560)
Q Consensus 416 ~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~s~~l 495 (1560)
.+....++..+||.++|+++...+..-.. ...+||++||+..|++.+|+.+-..+.+.+..+...++..+...+++|.+
T Consensus 82 sH~AtfrvL~~lRv~~f~kl~p~sp~~~~-r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~ 160 (573)
T COG4987 82 SHDATFRVLSALRVRLFEKLEPLSPALLL-RYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPL 160 (573)
T ss_pred hhHHHHHHHHHHHHHHHHhhccCChHHHH-hcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHH
Confidence 88899999999999999999998888774 45899999999999999999999999999988888888777777888888
Q ss_pred HHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhHHHH
Q 000406 496 SLVVLS-VTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKLGF 574 (1560)
Q Consensus 496 ~lv~l~-~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k~~~ 574 (1560)
++.+.. ++.+++++...+.+..++..++....+....+.+.|.+.|....+.||.++.+.+.+........+...|...
T Consensus 161 Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~ 240 (573)
T COG4987 161 ALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQAR 240 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 765543 3344455556666666777777788888888999999999999999999999999999988888888888888
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHcc
Q 000406 575 AKGAGMGVIYLVTYATWA-LAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSL-SYFAQFAQGTVAATRVFEIIDR 652 (1560)
Q Consensus 575 ~~~~~~~~~~~~~~~~~~-~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~-~~~~~~~~a~~a~~Ri~~~l~~ 652 (1560)
+.++......++..++.+ +.+|.++ .+-.|..+.-.+..+++.+.....++..+. ..+..+.+...|+.|+.++++.
T Consensus 241 ~~~~~~a~~~l~~g~~v~~~l~w~a~-~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q 319 (573)
T COG4987 241 FTGLSDAILLLIAGLLVIGLLLWMAA-QVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQ 319 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-cCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccC
Confidence 887777766666555544 4455544 234455553333333333233333444444 5667889999999999999987
Q ss_pred CCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEE
Q 000406 653 VPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLI 732 (1560)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I 732 (1560)
+|+.... . ...+.....++++||+|+|++. ++++|+|+||++++||++||+|+||||||||+++|.|.++|++|+|
T Consensus 320 ~~e~~~~--~-~~~~~~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i 395 (573)
T COG4987 320 KPEVTFP--D-EQTATTGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSI 395 (573)
T ss_pred CcccCCC--c-cccCCccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCee
Confidence 6654332 1 1111122279999999999964 4679999999999999999999999999999999999999999999
Q ss_pred EECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCC
Q 000406 733 TLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQL 812 (1560)
Q Consensus 733 ~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~L 812 (1560)
.++|.++..++.+.+|+.|++++|.+.||++|+|+|+.++++++++++++++++.+++++++++.|+|++|.+||.|..|
T Consensus 396 ~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~L 475 (573)
T COG4987 396 TLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRL 475 (573)
T ss_pred eECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecC
Q 000406 813 SGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGN 892 (1560)
Q Consensus 813 SgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~ 892 (1560)
|||||||++|||+|++|++++||||||.+||+.||+.+.+.|.+..+|||+|+||||+..+..||||+||++|+++|+|+
T Consensus 476 SGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~ 555 (573)
T COG4987 476 SGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGT 555 (573)
T ss_pred CchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEEEEECCeeeecCC
Confidence 99999999999999999999999999999999999999999999889999999999999999999999999999999999
Q ss_pred hhhHhhhcchHHHHHH
Q 000406 893 HRQLLERGGAYHDLVK 908 (1560)
Q Consensus 893 ~~~l~~~~~~~~~l~~ 908 (1560)
|.+|++++|.|+++++
T Consensus 556 ~~~Ll~~~g~~~~l~q 571 (573)
T COG4987 556 HAELLANNGRYKRLYQ 571 (573)
T ss_pred HHhhhccccHHHHHhc
Confidence 9999999999998864
No 68
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.6e-69 Score=688.90 Aligned_cols=533 Identities=23% Similarity=0.315 Sum_probs=451.5
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 347 VLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLEITCWRLVGERSAQR 426 (1560)
Q Consensus 347 ~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~ 426 (1560)
+++.++++++..++..+.++++++++|.+.... + ...+..++++++++.++..++.+++.++....+.++..+
T Consensus 8 ~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~---~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (544)
T TIGR01842 8 FIIVGLFSFVINILMLAPPLYMLQVYDRVLTSG---S----VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGA 80 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC---c----hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555666666677778999998765321 1 112223444455555666677788888888899999999
Q ss_pred HHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 427 IRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGE-KVAHFAHNIFTFICGYTVGFLRSWKVSLVVLSVTPL 505 (1560)
Q Consensus 427 lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~-~l~~~i~~i~~~i~~~ii~~~~s~~l~lv~l~~~pl 505 (1560)
+|.+++++++++|+.. .+...+++.+|++.+++.+.. .+..++..++.++ .+++++.++|++++++++++|+
T Consensus 81 lr~~~~~~ll~~~~~~------~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l 153 (544)
T TIGR01842 81 LNQPIFAASFSATLRR------GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVV 153 (544)
T ss_pred HHHHHHHHHhcCcccC------ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHH
Confidence 9999999999999842 245678899999999998877 3444444444444 4567889999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhHHHHHHHHHHHHHHH
Q 000406 506 MMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKLGFAKGAGMGVIYL 585 (1560)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~ 585 (1560)
++++..++.+..++..++..+..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...+.....+....+..+
T Consensus 154 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (544)
T TIGR01842 154 LVGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKY 233 (544)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77776666777777777778888888999999999999999999999999999999988877777777776666666666
Q ss_pred HHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCc
Q 000406 586 VTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIIDRVPEIDPYNSEGRK 665 (1560)
Q Consensus 586 ~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~~~~~~~~~~~~~~~ 665 (1560)
+..+..++++++|++++.+|.+++|.++++..++..+..++..+...+..+..+..+++|+.++++.+++.++ ...
T Consensus 234 ~~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~----~~~ 309 (544)
T TIGR01842 234 FRIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDP----AMP 309 (544)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC----CCC
Confidence 6666677788899999999999999999999888888889999999999999999999999999976443211 111
Q ss_pred CCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHH
Q 000406 666 LSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVK 745 (1560)
Q Consensus 666 ~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~ 745 (1560)
.+...+.|+++||+|+|+.. ++++|+|+||+|+|||+++|+||||||||||+++|+|+++|++|+|.+||+++.+++..
T Consensus 310 ~~~~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~ 388 (544)
T TIGR01842 310 LPEPEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRE 388 (544)
T ss_pred CCCCCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHH
Confidence 12234679999999999743 34689999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHH
Q 000406 746 WLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARA 825 (1560)
Q Consensus 746 ~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARA 825 (1560)
.+|+.|+||||+|++|++|++|||.++.++.++++++++++.++++++++++|+|++|.+|++|.+||||||||++||||
T Consensus 389 ~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARa 468 (544)
T TIGR01842 389 TFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARA 468 (544)
T ss_pred HHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHH
Confidence 99999999999999999999999998777678899999999999999999999999999999999999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhh
Q 000406 826 MIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 826 l~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
++++|+|||||||||+||+++++.+.+.++++. +++|+|+||||++.+..||+|++|++|++++.|+++++++
T Consensus 469 ll~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 469 LYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred HhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 999999999999999999999999999999874 6899999999999988899999999999999999999864
No 69
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-71 Score=713.71 Aligned_cols=502 Identities=25% Similarity=0.386 Sum_probs=365.8
Q ss_pred cEEEEEEEEEcCCCC-CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecC----------
Q 000406 672 KIEFKGVTFAYPSRP-ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLK---------- 740 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~-~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~---------- 740 (1560)
.|+++|++++|+... ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|+++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 599999999996322 246999999999999999999999999999999999999999999999997552
Q ss_pred CccHH---HHh-ccEEEEecCC--cCcc-ccHHHHHhcCCC---CCCHHHHHHHHHHhhhHHHHHhCCCCCC---cccCC
Q 000406 741 SLQVK---WLR-TQIGMVGQEP--ILFA-TSILENVLMGKE---NATMKEAVAACKAASAHSFISELPLGYD---TQVGD 807 (1560)
Q Consensus 741 ~~~~~---~lr-~~i~~v~Q~~--~lf~-~Tv~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~gl~---t~~~~ 807 (1560)
+.+.. .+| ++||||+|+| .+++ .||.|||.++.. ....++.. ..+.+.++.+ |+. .....
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gL~~~~~~~~~ 164 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAM-----VEAKRMLDQV--RIPEAQTILSR 164 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHC--CCCChhhHHhC
Confidence 12222 233 4799999998 5776 499999987531 11222211 1122334444 442 34567
Q ss_pred CCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-C-CcEEEEEecCcccccc-CCEEEEEeC
Q 000406 808 RGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-V-GRTTIVIAHRLATVKN-ANTIVVLDQ 884 (1560)
Q Consensus 808 ~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~-~~tvi~itH~l~~i~~-~D~i~vl~~ 884 (1560)
...+|||||||||+|||||+.+|+||||||||++||+.+++.+.+.|+++. + |+|||+|||+++.+.. ||||++|++
T Consensus 165 ~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~ 244 (623)
T PRK10261 165 YPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQ 244 (623)
T ss_pred CCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeC
Confidence 788999999999999999999999999999999999999999999999874 3 8999999999999866 999999999
Q ss_pred CeEEEecChhhHhhhcc-hHHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhh
Q 000406 885 GSVVEIGNHRQLLERGG-AYHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQ 963 (1560)
Q Consensus 885 G~iv~~G~~~~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 963 (1560)
|++++.|++++++.... .|...+
T Consensus 245 G~i~~~g~~~~~~~~~~~~~~~~l-------------------------------------------------------- 268 (623)
T PRK10261 245 GEAVETGSVEQIFHAPQHPYTRAL-------------------------------------------------------- 268 (623)
T ss_pred CeecccCCHHHhhcCCCChhhhhh--------------------------------------------------------
Confidence 99999998877643110 000000
Q ss_pred hhHhhhhCCCCchhhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHH
Q 000406 964 TVEEEQQKPRPRKFQLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGL 1043 (1560)
Q Consensus 964 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 1043 (1560)
... .+ ....
T Consensus 269 -------------------~~~------------------------~~----------------~~~~------------ 277 (623)
T PRK10261 269 -------------------LAA------------------------VP----------------QLGA------------ 277 (623)
T ss_pred -------------------hhc------------------------cC----------------cccc------------
Confidence 000 00 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 000406 1044 GFGCIIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSS 1123 (1560)
Q Consensus 1044 ~~~~~~~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~ 1123 (1560)
...+ ..+ .-+..
T Consensus 278 -----------------------------~~~~--~~~-~~~~~------------------------------------ 289 (623)
T PRK10261 278 -----------------------------MKGL--DYP-RRFPL------------------------------------ 289 (623)
T ss_pred -----------------------------cccc--cCC-ccccc------------------------------------
Confidence 0000 000 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHH
Q 000406 1124 AAVGLGVSLVLNWRLTLVAAALTPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKA 1203 (1560)
Q Consensus 1124 ~i~~l~~~~~~~~~l~lv~l~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~ 1203 (1560)
T Consensus 290 -------------------------------------------------------------------------------- 289 (623)
T PRK10261 290 -------------------------------------------------------------------------------- 289 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Q 000406 1204 LSEPKKKSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAAT 1283 (1560)
Q Consensus 1204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~ 1283 (1560)
... .. .
T Consensus 290 ~~~-~~-------------------------------------~------------------------------------ 295 (623)
T PRK10261 290 ISL-EH-------------------------------------P------------------------------------ 295 (623)
T ss_pred ccc-cc-------------------------------------c------------------------------------
Confidence 000 00 0
Q ss_pred HHHHHHHHhccCCccccccccccCCCCCccEEEEEEEEEcCCCC--------CccceeeeeEEEeCCcEEEEEcCCCCCH
Q 000406 1284 AIPAVLQITKRKPLIDNVKGRKLERSKPLGIELKMVTFTYPSRP--------EVTVLKDFCLKVKGGSMVALVGGSGSGK 1355 (1560)
Q Consensus 1284 s~~ri~~i~~~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~--------~~~vL~~vSf~I~~GE~vaIVG~SGSGK 1355 (1560)
+ ...+..... ... ....-++++||++.|+.+. ...+|+||||+|++||++||+|+|||||
T Consensus 296 ---~----~~~~~~~~~----~~~-~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~nGsGK 363 (623)
T PRK10261 296 ---A----KQEPPIEQD----TVV-DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGESGSGK 363 (623)
T ss_pred ---c----ccCcccccc----ccc-CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECCCCCCH
Confidence 0 000000000 000 0112499999999996311 2369999999999999999999999999
Q ss_pred HHHHHHHhcccCCCccEEEECCEecCCCCHH---HHhhceEEEcCCCC--CCC-ccHHHHHhcCC--CCC-CH----HHH
Q 000406 1356 STVIWLIQRFYDPNQGKVMIEGVDLREINVK---WLRKQTALVGQEPA--LFA-GTIRDNIALGN--PKA-SW----AEI 1422 (1560)
Q Consensus 1356 STLl~lL~rl~~p~~G~I~IdGvdi~~i~l~---~LR~~I~~VpQdp~--LF~-gTIreNL~~g~--~~~-sd----~eI 1422 (1560)
|||+++|+|+++|++|+|.++|.++...+.. .+|++|+||||+|. ++. .||.+|+.++. ... .. +++
T Consensus 364 STLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~ 443 (623)
T PRK10261 364 STTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKAAAARV 443 (623)
T ss_pred HHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 9999999999999999999999999877643 45778999999983 665 59999987531 011 11 234
Q ss_pred HHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--
Q 000406 1423 EEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK-- 1500 (1560)
Q Consensus 1423 ~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~-- 1500 (1560)
.++++.+++.+ .........||||||||++|||||+.+|+||||||||++||+.+.+.|.+.|+++.+
T Consensus 444 ~~~L~~~gL~~----------~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~~l~~~~ 513 (623)
T PRK10261 444 AWLLERVGLLP----------EHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLLDLQRDF 513 (623)
T ss_pred HHHHHHcCCCH----------HHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhc
Confidence 44455444421 112233457999999999999999999999999999999999999999999988643
Q ss_pred CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhhccChHH-HHHHHH
Q 000406 1501 RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLASHLNGVY-ASLVRA 1552 (1560)
Q Consensus 1501 ~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y-~~l~~~ 1552 (1560)
+.|+|+|||+++.+.. ||||+||++|+|++.|++++++.+ ....| ..++..
T Consensus 514 g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~-p~~~~~~~l~~~ 566 (623)
T PRK10261 514 GIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFEN-PQHPYTRKLMAA 566 (623)
T ss_pred CCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcC-CCCHHHHHHHhh
Confidence 6899999999999976 999999999999999999999863 33344 345543
No 70
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-71 Score=698.79 Aligned_cols=462 Identities=23% Similarity=0.385 Sum_probs=358.3
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC--CccEEEECCeecCCccHH-HHh
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP--TKGLITLDGHDLKSLQVK-WLR 748 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~--~~G~I~i~g~~i~~~~~~-~lr 748 (1560)
.|+++|++++|++ .++|+||||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|.++...+.. ..|
T Consensus 5 ~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFGG---VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeCC---eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 4899999999963 4699999999999999999999999999999999999986 899999999999776654 346
Q ss_pred ccEEEEecCCcCccc-cHHHHHhcCCCC-----CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHH
Q 000406 749 TQIGMVGQEPILFAT-SILENVLMGKEN-----ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIAL 822 (1560)
Q Consensus 749 ~~i~~v~Q~~~lf~~-Tv~eNi~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRial 822 (1560)
+.|+||+|++.++.. |++||+.++... ...++..+ .+.+.++.+ |++........+||||||||++|
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~l 154 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYL-----RAQKLLAQL--KLDINPATPVGNLGLGQQQLVEI 154 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHH-----HHHHHHHHc--CCCCCcccchhhCCHHHHHHHHH
Confidence 789999999988875 999999886431 11111111 223445554 55555667778999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHh-cCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhhc
Q 000406 823 ARAMIKDPRILLLDEPTSALDSESESIVQQAIDKI-SVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLERG 900 (1560)
Q Consensus 823 ARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~-~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~~ 900 (1560)
||||+.+|+||||||||++||+.+...+.+.|.++ .+|+|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 155 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~- 233 (506)
T PRK13549 155 AKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTED- 233 (506)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCHH-
Confidence 99999999999999999999999999999999887 358999999999999876 999999999999988765443100
Q ss_pred chHHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhhHhhhhCCCCchhhHH
Q 000406 901 GAYHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQTVEEEQQKPRPRKFQLS 980 (1560)
Q Consensus 901 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 980 (1560)
+...
T Consensus 234 ----~~~~------------------------------------------------------------------------ 237 (506)
T PRK13549 234 ----DIIT------------------------------------------------------------------------ 237 (506)
T ss_pred ----HHHH------------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 981 EIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGW 1060 (1560)
Q Consensus 981 ~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1060 (1560)
.+..
T Consensus 238 ---------------------------------------~~~~------------------------------------- 241 (506)
T PRK13549 238 ---------------------------------------MMVG------------------------------------- 241 (506)
T ss_pred ---------------------------------------HhhC-------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1061 AGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTL 1140 (1560)
Q Consensus 1061 ~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~l 1140 (1560)
.+.. .
T Consensus 242 -------------------~~~~--~------------------------------------------------------ 246 (506)
T PRK13549 242 -------------------RELT--A------------------------------------------------------ 246 (506)
T ss_pred -------------------cCcc--c------------------------------------------------------
Confidence 0000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 000406 1141 VAAALTPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILGL 1220 (1560)
Q Consensus 1141 v~l~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1220 (1560)
T Consensus 247 -------------------------------------------------------------------------------- 246 (506)
T PRK13549 247 -------------------------------------------------------------------------------- 246 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCcccc
Q 000406 1221 TLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLIDN 1300 (1560)
Q Consensus 1221 ~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~~~ 1300 (1560)
..+....
T Consensus 247 -------------------------------------------------------------------------~~~~~~~ 253 (506)
T PRK13549 247 -------------------------------------------------------------------------LYPREPH 253 (506)
T ss_pred -------------------------------------------------------------------------ccccccc
Confidence 0000000
Q ss_pred ccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-CCccEEEECCEe
Q 000406 1301 VKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD-PNQGKVMIEGVD 1379 (1560)
Q Consensus 1301 ~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~-p~~G~I~IdGvd 1379 (1560)
. ....-|+++||++.|+.+...++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.+
T Consensus 254 ----~---~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~g~~ 326 (506)
T PRK13549 254 ----T---IGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFIDGKP 326 (506)
T ss_pred ----C---CCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEECCEE
Confidence 0 00124899999999953213459999999999999999999999999999999999998 599999999999
Q ss_pred cCCCCH-HHHhhceEEEcCCC---CCCC-ccHHHHHhcCCC-C------CCHHHHHHHHHHHhHHHHHHhCCCCccc-cc
Q 000406 1380 LREINV-KWLRKQTALVGQEP---ALFA-GTIRDNIALGNP-K------ASWAEIEEAAEEAYIHKFISSLPQGYET-QV 1446 (1560)
Q Consensus 1380 i~~i~l-~~LR~~I~~VpQdp---~LF~-gTIreNL~~g~~-~------~sd~eI~~al~~a~l~~~I~~Lp~Gldt-~V 1446 (1560)
+...+. +.+|+.++||||++ .+|. .|+.||+.++.. . .+.++. ...+.+.+..+ |++. ..
T Consensus 327 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~ 399 (506)
T PRK13549 327 VKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAE-----LKTILESIQRL--KVKTASP 399 (506)
T ss_pred CCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHH-----HHHHHHHHHhc--CccCCCc
Confidence 876543 45677899999996 3554 699999986421 0 011111 12233444443 2321 23
Q ss_pred cCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEe
Q 000406 1447 GESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVR 1524 (1560)
Q Consensus 1447 ge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd 1524 (1560)
......||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. +++|||+|||+++.+.. ||+|++|+
T Consensus 400 ~~~~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d~v~~l~ 479 (506)
T PRK13549 400 ELAIARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSDRVLVMH 479 (506)
T ss_pred ccccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEE
Confidence 34445799999999999999999999999999999999999999999998764 47899999999999876 99999999
Q ss_pred CCEEEEecCHHHHH
Q 000406 1525 DGAVVEYGSHETLL 1538 (1560)
Q Consensus 1525 ~G~IvE~Gt~~eLl 1538 (1560)
+|+|+..|+++++.
T Consensus 480 ~G~i~~~~~~~~~~ 493 (506)
T PRK13549 480 EGKLKGDLINHNLT 493 (506)
T ss_pred CCEEEEEeccccCC
Confidence 99999999888763
No 71
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=1.4e-70 Score=695.83 Aligned_cols=465 Identities=27% Similarity=0.443 Sum_probs=355.8
Q ss_pred cEEEEEEEEEcCCC-CCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC-----CccEEEECCeecCCccHH
Q 000406 672 KIEFKGVTFAYPSR-PETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP-----TKGLITLDGHDLKSLQVK 745 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~-~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~-----~~G~I~i~g~~i~~~~~~ 745 (1560)
.|+++|++++|+.. ...++|+||||+|++||++||+||||||||||+++|+|+++| ++|+|.++|+++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999632 124699999999999999999999999999999999999986 799999999999776543
Q ss_pred ---HHh-ccEEEEecCCc--Ccc-ccHHHHHhcCCC---CCCHHHHHHHHHHhhhHHHHHhCCCCCCc---ccCCCCCCC
Q 000406 746 ---WLR-TQIGMVGQEPI--LFA-TSILENVLMGKE---NATMKEAVAACKAASAHSFISELPLGYDT---QVGDRGTQL 812 (1560)
Q Consensus 746 ---~lr-~~i~~v~Q~~~--lf~-~Tv~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~gl~t---~~~~~g~~L 812 (1560)
.+| ++|+||+|++. +++ .|+++|+.++.. .....+.. ..+.+.++.+ |++. .......+|
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~~~~L 157 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAAR-----GEILNCLDRV--GIRQAAKRLTDYPHQL 157 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHC--CCCChHHHHhhCCccc
Confidence 233 57999999985 444 499999864310 11221111 1122334444 4432 245677899
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEE
Q 000406 813 SGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVE 889 (1560)
Q Consensus 813 SgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~ 889 (1560)
|||||||++|||||+.+|++|||||||++||+.+...+.+.|+++. .|+|||+|||+++.+.. ||||++|++|++++
T Consensus 158 SgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~ 237 (529)
T PRK15134 158 SGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVE 237 (529)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999873 38999999999999875 99999999999999
Q ss_pred ecChhhHhhhcchHHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhhHhhh
Q 000406 890 IGNHRQLLERGGAYHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQTVEEEQ 969 (1560)
Q Consensus 890 ~G~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 969 (1560)
.|++++++.... . ..
T Consensus 238 ~g~~~~~~~~~~-------------------------~-------------------------~~--------------- 252 (529)
T PRK15134 238 QNRAATLFSAPT-------------------------H-------------------------PY--------------- 252 (529)
T ss_pred eCCHHHHhhCCC-------------------------C-------------------------HH---------------
Confidence 888765532100 0 00
Q ss_pred hCCCCchhhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHH
Q 000406 970 QKPRPRKFQLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCII 1049 (1560)
Q Consensus 970 ~~~~~~~~~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 1049 (1560)
...
T Consensus 253 ---------~~~-------------------------------------------------------------------- 255 (529)
T PRK15134 253 ---------TQK-------------------------------------------------------------------- 255 (529)
T ss_pred ---------HHH--------------------------------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1050 FMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLG 1129 (1560)
Q Consensus 1050 ~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~ 1129 (1560)
++. .++.
T Consensus 256 -----------------------~~~----~~~~---------------------------------------------- 262 (529)
T PRK15134 256 -----------------------LLN----SEPS---------------------------------------------- 262 (529)
T ss_pred -----------------------HHH----hCcc----------------------------------------------
Confidence 000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHH
Q 000406 1130 VSLVLNWRLTLVAAALTPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKK 1209 (1560)
Q Consensus 1130 ~~~~~~~~l~lv~l~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~ 1209 (1560)
T Consensus 263 -------------------------------------------------------------------------------- 262 (529)
T PRK15134 263 -------------------------------------------------------------------------------- 262 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Q 000406 1210 KSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVL 1289 (1560)
Q Consensus 1210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~ 1289 (1560)
T Consensus 263 -------------------------------------------------------------------------------- 262 (529)
T PRK15134 263 -------------------------------------------------------------------------------- 262 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhccCCccccccccccCCCCCccEEEEEEEEEcCCC--------CCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHH
Q 000406 1290 QITKRKPLIDNVKGRKLERSKPLGIELKMVTFTYPSR--------PEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWL 1361 (1560)
Q Consensus 1290 ~i~~~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~--------~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~l 1361 (1560)
..+.... . ....-|+++||++.|+.. .+..+|+||||+|++||++||+|+||||||||+++
T Consensus 263 ----~~~~~~~----~---~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~ 331 (529)
T PRK15134 263 ----GDPVPLP----E---PASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLA 331 (529)
T ss_pred ----ccccccC----C---CCCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHH
Confidence 0000000 0 001148999999999521 12469999999999999999999999999999999
Q ss_pred HhcccCCCccEEEECCEecCCCCHHH---HhhceEEEcCCC--CCCC-ccHHHHHhcCCC----CCCH----HHHHHHHH
Q 000406 1362 IQRFYDPNQGKVMIEGVDLREINVKW---LRKQTALVGQEP--ALFA-GTIRDNIALGNP----KASW----AEIEEAAE 1427 (1560)
Q Consensus 1362 L~rl~~p~~G~I~IdGvdi~~i~l~~---LR~~I~~VpQdp--~LF~-gTIreNL~~g~~----~~sd----~eI~~al~ 1427 (1560)
|+|+++ ++|+|.++|.++..++... +|++++||||++ .+|. .|++||+.++.. .... +++.++++
T Consensus 332 l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~ 410 (529)
T PRK15134 332 LLRLIN-SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVME 410 (529)
T ss_pred HhCcCC-CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHHHHHH
Confidence 999994 8999999999998776543 477899999998 3665 599999986411 0111 22333344
Q ss_pred HHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEE
Q 000406 1428 EAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTI 1505 (1560)
Q Consensus 1428 ~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI 1505 (1560)
..++.+ ........+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|||
T Consensus 411 ~~~l~~----------~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi 480 (529)
T PRK15134 411 EVGLDP----------ETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYL 480 (529)
T ss_pred HcCCCH----------HHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEE
Confidence 333321 122334457999999999999999999999999999999999999999999998753 68999
Q ss_pred EEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000406 1506 VVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLAS 1540 (1560)
Q Consensus 1506 ~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~ 1540 (1560)
+|||+++.+.. ||+|++|++|+|++.|++++++++
T Consensus 481 ~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 516 (529)
T PRK15134 481 FISHDLHVVRALCHQVIVLRQGEVVEQGDCERVFAA 516 (529)
T ss_pred EEeCCHHHHHHhcCeEEEEECCEEEEEcCHHHHhcC
Confidence 99999999876 999999999999999999999863
No 72
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-70 Score=688.52 Aligned_cols=457 Identities=22% Similarity=0.378 Sum_probs=353.0
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHH-Hhcc
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKW-LRTQ 750 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~-lr~~ 750 (1560)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 5 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFGP---VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 4899999999963 45899999999999999999999999999999999999999999999999998776544 3467
Q ss_pred EEEEecCCcCccc-cHHHHHhcCCCCC---------CHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHH
Q 000406 751 IGMVGQEPILFAT-SILENVLMGKENA---------TMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRI 820 (1560)
Q Consensus 751 i~~v~Q~~~lf~~-Tv~eNi~~g~~~~---------~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRi 820 (1560)
|+||+|++.++.. |++||+.++.... ..++.. ..+.+.++.+ |+....+....+||||||||+
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrv 154 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMR-----VRAAMMLLRV--GLKVDLDEKVANLSISHKQML 154 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHH-----HHHHHHHHHc--CCCCCcccchhhCCHHHHHHH
Confidence 9999999988875 9999998754210 111111 1223344444 555556677789999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 821 ALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 821 alARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
+|||||+.+|+||||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 155 ~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 155 EIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 99999999999999999999999999999999998874 48999999999999876 99999999999998887655421
Q ss_pred hcchHHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhhHhhhhCCCCchhh
Q 000406 899 RGGAYHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQTVEEEQQKPRPRKFQ 978 (1560)
Q Consensus 899 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 978 (1560)
. +....
T Consensus 235 ~-----~~~~~--------------------------------------------------------------------- 240 (510)
T PRK09700 235 D-----DIVRL--------------------------------------------------------------------- 240 (510)
T ss_pred H-----HHHHH---------------------------------------------------------------------
Confidence 0 00000
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 979 LSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFC 1058 (1560)
Q Consensus 979 ~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 1058 (1560)
.
T Consensus 241 ------------------------------------------~------------------------------------- 241 (510)
T PRK09700 241 ------------------------------------------M------------------------------------- 241 (510)
T ss_pred ------------------------------------------h-------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1059 GWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRL 1138 (1560)
Q Consensus 1059 ~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l 1138 (1560)
+.. .. ..++
T Consensus 242 --------------------------~~~---~~---~~~~--------------------------------------- 250 (510)
T PRK09700 242 --------------------------VGR---EL---QNRF--------------------------------------- 250 (510)
T ss_pred --------------------------cCC---Cc---cccc---------------------------------------
Confidence 000 00 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHH
Q 000406 1139 TLVAAALTPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQIL 1218 (1560)
Q Consensus 1139 ~lv~l~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 1218 (1560)
T Consensus 251 -------------------------------------------------------------------------------- 250 (510)
T PRK09700 251 -------------------------------------------------------------------------------- 250 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCcc
Q 000406 1219 GLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLI 1298 (1560)
Q Consensus 1219 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~ 1298 (1560)
....+..
T Consensus 251 -------------------------------------------------------------------------~~~~~~~ 257 (510)
T PRK09700 251 -------------------------------------------------------------------------NAMKENV 257 (510)
T ss_pred -------------------------------------------------------------------------ccccccc
Confidence 0000000
Q ss_pred ccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCE
Q 000406 1299 DNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGV 1378 (1560)
Q Consensus 1299 ~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGv 1378 (1560)
.. . ..+.-|+++|+++.|. .+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 258 ~~----~---~~~~~l~~~~l~~~~~-----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~ 325 (510)
T PRK09700 258 SN----L---AHETVFEVRNVTSRDR-----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGK 325 (510)
T ss_pred cc----C---CCCcEEEEeCccccCC-----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCE
Confidence 00 0 0112499999998762 2899999999999999999999999999999999999999999999999
Q ss_pred ecCCCCH-HHHhhceEEEcCCC---CCCC-ccHHHHHhcCCCC-----------CCHHHHHHHHHHHhHHHHHHhCCCCc
Q 000406 1379 DLREINV-KWLRKQTALVGQEP---ALFA-GTIRDNIALGNPK-----------ASWAEIEEAAEEAYIHKFISSLPQGY 1442 (1560)
Q Consensus 1379 di~~i~l-~~LR~~I~~VpQdp---~LF~-gTIreNL~~g~~~-----------~sd~eI~~al~~a~l~~~I~~Lp~Gl 1442 (1560)
++...+. ..+|+.++||||++ .+|. -|++||+.++... ....+. ...+.+.+..+ |+
T Consensus 326 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l 398 (510)
T PRK09700 326 DISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDE-----QRTAENQRELL--AL 398 (510)
T ss_pred ECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHH-----HHHHHHHHHhc--CC
Confidence 9876554 45678899999984 4665 5999999875210 011110 11223333333 23
Q ss_pred c-ccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCE
Q 000406 1443 E-TQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANM 1519 (1560)
Q Consensus 1443 d-t~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDr 1519 (1560)
. .........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. +++|||+|||+++.+.. ||+
T Consensus 399 ~~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~ 478 (510)
T PRK09700 399 KCHSVNQNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDR 478 (510)
T ss_pred CCCCccCccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCE
Confidence 2 12233344799999999999999999999999999999999999999999999863 47899999999998865 999
Q ss_pred EEEEeCCEEEEecCH
Q 000406 1520 IAVVRDGAVVEYGSH 1534 (1560)
Q Consensus 1520 IlVLd~G~IvE~Gt~ 1534 (1560)
|++|++|++++.++.
T Consensus 479 i~~l~~G~i~~~~~~ 493 (510)
T PRK09700 479 IAVFCEGRLTQILTN 493 (510)
T ss_pred EEEEECCEEEEEecC
Confidence 999999999998866
No 73
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1e-68 Score=621.10 Aligned_cols=536 Identities=23% Similarity=0.277 Sum_probs=465.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 992 MIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGWAGTKLTMRVRE 1071 (1560)
Q Consensus 992 ~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~Lr~ 1071 (1560)
.++...+++.+..++....|+++-++.+-... +......-.+.++.+++.++..++..++..+..+.+.++...+..
T Consensus 24 a~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~---S~s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~ 100 (580)
T COG4618 24 AFIGVGLFSAVINLLALTGPLYMLQVYDRVLP---SRSVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNG 100 (580)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcc---CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 34444455555566666777777666555442 233344455666667777788888899999999999999999999
Q ss_pred HHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1072 LLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTLVAAALTPFTLG 1151 (1560)
Q Consensus 1072 ~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~lv~l~~ipl~~~ 1151 (1560)
.+|...++++.. .+..|+=..- -+|.++++.+++..-+..+.+.....+.++++|.+++++.++.++...+++.
T Consensus 101 ~v~~a~~~~~l~-----~~~~g~~~Q~-LrDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~ 174 (580)
T COG4618 101 PVFAASFSAPLL-----RRGSGDGLQP-LRDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVV 174 (580)
T ss_pred HHHHHHHhhHHh-----hcCCCccccc-hhhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998765543 2333432222 3699999999999999999999999999999999999999998888777776
Q ss_pred HHHHHHHHhcchhhh-hhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1152 ASYLSLIINVGPKID-NSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILGLTLGFSQGAMY 1230 (1560)
Q Consensus 1152 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1230 (1560)
..++.....+..-.+ .+...+.+.+...+.++.++|++.|+.....++|.+....+.....+..-..+.+..++..+-.
T Consensus 175 la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm 254 (580)
T COG4618 175 LALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRM 254 (580)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 666655544433333 5556667788888999999999999999999999999999998888888888899999999999
Q ss_pred HHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCccccccccccCCCC
Q 000406 1231 VAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLIDNVKGRKLERSK 1310 (1560)
Q Consensus 1231 ~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~~~~~~~~~~~~~ 1310 (1560)
+....++.+|++++..|++|.|.+++...++.....|+...+..|..+..+..+..|+.++++..|...+.- ..+.|
T Consensus 255 ~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~m--~LP~P- 331 (580)
T COG4618 255 ALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAERM--PLPAP- 331 (580)
T ss_pred HHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCC--CCCCC-
Confidence 999999999999999999999999999999999999999999999999999999999999998776644321 12222
Q ss_pred CccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhh
Q 000406 1311 PLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRK 1390 (1560)
Q Consensus 1311 ~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~ 1390 (1560)
.+.+.+|+|++.=|+. ++++|++|||+++|||-+|||||||||||||.++|.|.++|.+|.|.+||-|++.++.+++-+
T Consensus 332 ~g~L~Ve~l~~~PPg~-~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~ 410 (580)
T COG4618 332 QGALSVERLTAAPPGQ-KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGR 410 (580)
T ss_pred CceeeEeeeeecCCCC-CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhcc
Confidence 5679999999976654 568999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccC
Q 000406 1391 QTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKG 1470 (1560)
Q Consensus 1391 ~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~ 1470 (1560)
+|||.|||..||+|||+|||+-+.++.+++.|.+|++.++.||.|.+||+||||.||++|..|||||||||+|||||+.+
T Consensus 411 hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~ 490 (580)
T COG4618 411 HIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGD 490 (580)
T ss_pred ccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCC
Confidence 99999999999999999999988889999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHh-cCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000406 1471 SRVLLLDEASSALDLESEKHVQDALRKV-SKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLAS 1540 (1560)
Q Consensus 1471 p~ILILDEaTSaLD~~Te~~I~~~L~~~-~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~~ 1540 (1560)
|.+++||||-||||.+-|+.+.++|.+. .+|+|+|+||||++.+..+|+|+||++|++..+|+-+|.+++
T Consensus 491 P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 491 PFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred CcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 9999999999999999999999999875 468999999999999999999999999999999999999973
No 74
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1e-66 Score=707.48 Aligned_cols=220 Identities=24% Similarity=0.429 Sum_probs=189.2
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhcc
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQ 750 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~ 750 (1560)
..|+++|+++.|++. ++.+|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. +...+|+.
T Consensus 927 ~~L~I~nLsK~y~~~-~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~ 1004 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPS-GRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQS 1004 (2272)
T ss_pred ceEEEEeEEEEecCC-CceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhc
Confidence 369999999999632 3569999999999999999999999999999999999999999999999999865 45567889
Q ss_pred EEEEecCCcCccc-cHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhc
Q 000406 751 IGMVGQEPILFAT-SILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMI 827 (1560)
Q Consensus 751 i~~v~Q~~~lf~~-Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~ 827 (1560)
||||||++.+|+. ||+|||.++... ...++..+ .+.+.++.+ |++...+....+||||||||++|||||+
T Consensus 1005 IG~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~-----~v~~lL~~v--gL~~~~~~~~~~LSGGqKQRLsLArALi 1077 (2272)
T TIGR01257 1005 LGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQL-----EMEAMLEDT--GLHHKRNEEAQDLSGGMQRKLSVAIAFV 1077 (2272)
T ss_pred EEEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHH
Confidence 9999999999975 999999875321 11222111 223345554 5666677788899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 828 KDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 828 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
.+|+|||||||||+||+.+++.+++.|+++.+|+|||++||+++.+.. ||||++|++|++++.|++++|.++
T Consensus 1078 ~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~ 1150 (2272)
T TIGR01257 1078 GDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNC 1150 (2272)
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHh
Confidence 999999999999999999999999999998779999999999999976 999999999999999999998764
No 75
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.3e-69 Score=682.68 Aligned_cols=454 Identities=21% Similarity=0.388 Sum_probs=352.8
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHH-Hhcc
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKW-LRTQ 750 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~-lr~~ 750 (1560)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFPG---VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeCC---eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 4899999999963 45899999999999999999999999999999999999999999999999987655433 4568
Q ss_pred EEEEecCCcCccc-cHHHHHhcCCCCC------CHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHH
Q 000406 751 IGMVGQEPILFAT-SILENVLMGKENA------TMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALA 823 (1560)
Q Consensus 751 i~~v~Q~~~lf~~-Tv~eNi~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialA 823 (1560)
|+||+|++.++.. |++||+.++.... ..++.. ..+.+.++.+ |+.........+||||||||++||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 153 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMY-----AEADKLLARL--NLRFSSDKLVGELSIGEQQMVEIA 153 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHH-----HHHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHH
Confidence 9999999988875 9999998864211 111111 1123345554 555555667789999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhhcc
Q 000406 824 RAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLERGG 901 (1560)
Q Consensus 824 RAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~~~ 901 (1560)
|||+.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 154 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-- 231 (501)
T PRK10762 154 KVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTED-- 231 (501)
T ss_pred HHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCHH--
Confidence 99999999999999999999999999999998873 47899999999999876 999999999999987765432100
Q ss_pred hHHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhhHhhhhCCCCchhhHHH
Q 000406 902 AYHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQTVEEEQQKPRPRKFQLSE 981 (1560)
Q Consensus 902 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 981 (1560)
.+..
T Consensus 232 ---~~~~------------------------------------------------------------------------- 235 (501)
T PRK10762 232 ---SLIE------------------------------------------------------------------------- 235 (501)
T ss_pred ---HHHH-------------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 982 IWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGWA 1061 (1560)
Q Consensus 982 l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 1061 (1560)
..
T Consensus 236 --------------------------------------~~---------------------------------------- 237 (501)
T PRK10762 236 --------------------------------------MM---------------------------------------- 237 (501)
T ss_pred --------------------------------------Hh----------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1062 GTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTLV 1141 (1560)
Q Consensus 1062 ~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~lv 1141 (1560)
+.. . +
T Consensus 238 -----------------------~~~---~-------~------------------------------------------ 242 (501)
T PRK10762 238 -----------------------VGR---K-------L------------------------------------------ 242 (501)
T ss_pred -----------------------cCC---C-------c------------------------------------------
Confidence 000 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 000406 1142 AAALTPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILGLT 1221 (1560)
Q Consensus 1142 ~l~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1221 (1560)
.
T Consensus 243 ---------------------------------------------------------------~---------------- 243 (501)
T PRK10762 243 ---------------------------------------------------------------E---------------- 243 (501)
T ss_pred ---------------------------------------------------------------c----------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCccccc
Q 000406 1222 LGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLIDNV 1301 (1560)
Q Consensus 1222 ~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~~~~ 1301 (1560)
...+....
T Consensus 244 -----------------------------------------------------------------------~~~~~~~~- 251 (501)
T PRK10762 244 -----------------------------------------------------------------------DQYPRLDK- 251 (501)
T ss_pred -----------------------------------------------------------------------cccccccc-
Confidence 00000000
Q ss_pred cccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecC
Q 000406 1302 KGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLR 1381 (1560)
Q Consensus 1302 ~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~ 1381 (1560)
.+.+.-|+++||++ .+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 252 ------~~~~~~l~~~~l~~--------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~i~ 317 (501)
T PRK10762 252 ------APGEVRLKVDNLSG--------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVV 317 (501)
T ss_pred ------CCCCcEEEEeCccc--------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEECC
Confidence 00012488999974 2799999999999999999999999999999999999999999999999998
Q ss_pred CCCH-HHHhhceEEEcCCC---CCC-CccHHHHHhcCCCC--------CCHHHHHHHHHHHhHHHHHHhCCCCcc-cccc
Q 000406 1382 EINV-KWLRKQTALVGQEP---ALF-AGTIRDNIALGNPK--------ASWAEIEEAAEEAYIHKFISSLPQGYE-TQVG 1447 (1560)
Q Consensus 1382 ~i~l-~~LR~~I~~VpQdp---~LF-~gTIreNL~~g~~~--------~sd~eI~~al~~a~l~~~I~~Lp~Gld-t~Vg 1447 (1560)
..+. +.+|++++||||++ .+| ..|++||+.++... .+.++. ...+.+++..+ |+. ....
T Consensus 318 ~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~ 390 (501)
T PRK10762 318 TRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADE-----QQAVSDFIRLF--NIKTPSME 390 (501)
T ss_pred CCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHH-----HHHHHHHHHhc--CCCCCCcc
Confidence 7765 34678899999997 344 46999999864210 111111 11233344433 331 2234
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeC
Q 000406 1448 ESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRD 1525 (1560)
Q Consensus 1448 e~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~ 1525 (1560)
.....||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++
T Consensus 391 ~~~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v~~l~~ 470 (501)
T PRK10762 391 QAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRILVMHE 470 (501)
T ss_pred CchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEEC
Confidence 4455799999999999999999999999999999999999999999999874 47899999999999876 999999999
Q ss_pred CEEEEecCHHHHH
Q 000406 1526 GAVVEYGSHETLL 1538 (1560)
Q Consensus 1526 G~IvE~Gt~~eLl 1538 (1560)
|+|++.|+++++.
T Consensus 471 G~i~~~~~~~~~~ 483 (501)
T PRK10762 471 GRISGEFTREQAT 483 (501)
T ss_pred CEEEEEeccccCC
Confidence 9999999887753
No 76
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.2e-69 Score=686.42 Aligned_cols=457 Identities=26% Similarity=0.438 Sum_probs=348.2
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCC--CCCccEEEEC---------------
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFY--DPTKGLITLD--------------- 735 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~--~~~~G~I~i~--------------- 735 (1560)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+. +|++|+|.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~iiG~nGsGKSTLl~~l~Gl~~~~p~~G~i~~~~~~~~~~~~~~~~~~ 77 (520)
T TIGR03269 1 IEVKNLTKKFDG---KEVLKNISFTIEEGEVLGILGRSGAGKSVLMHVLRGMDQYEPTSGRIIYHVALCEKCGYVERPSK 77 (520)
T ss_pred CEEEEEEEEECC---eEeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhhcccCCCCceEEEEeccccccccccccccc
Confidence 578999999963 45899999999999999999999999999999999996 7999999997
Q ss_pred --------CeecC-------Ccc---HHHHhccEEEEecC-CcCccc-cHHHHHhcCCCC--CCHHHHHHHHHHhhhHHH
Q 000406 736 --------GHDLK-------SLQ---VKWLRTQIGMVGQE-PILFAT-SILENVLMGKEN--ATMKEAVAACKAASAHSF 793 (1560)
Q Consensus 736 --------g~~i~-------~~~---~~~lr~~i~~v~Q~-~~lf~~-Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~ 793 (1560)
|.++. ..+ ...+|+.++||+|+ +.+|+. |++||+.++... ...++.. ..+.+.
T Consensus 78 ~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~ 152 (520)
T TIGR03269 78 VGEPCPVCGGTLEPEEVDFWNLSDKLRRRIRKRIAIMLQRTFALYGDDTVLDNVLEALEEIGYEGKEAV-----GRAVDL 152 (520)
T ss_pred cccccccccccccccchhhhccCHHHHHHhhhcEEEEeccccccCCCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHH
Confidence 33221 111 12456789999998 577764 999999875321 1122211 122334
Q ss_pred HHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcc
Q 000406 794 ISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLA 871 (1560)
Q Consensus 794 i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~ 871 (1560)
++.+ |++........+|||||||||+|||||+.+|+||||||||++||+.+.+.+.+.|+++. .|+|||+|||+++
T Consensus 153 l~~~--gl~~~~~~~~~~LSgGq~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivtHd~~ 230 (520)
T TIGR03269 153 IEMV--QLSHRITHIARDLSGGEKQRVVLARQLAKEPFLFLADEPTGTLDPQTAKLVHNALEEAVKASGISMVLTSHWPE 230 (520)
T ss_pred HHHc--CChhhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEeeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH
Confidence 4444 55555667778999999999999999999999999999999999999999999999873 3899999999999
Q ss_pred cccc-CCEEEEEeCCeEEEecChhhHhhhcchHHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhh
Q 000406 872 TVKN-ANTIVVLDQGSVVEIGNHRQLLERGGAYHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVS 950 (1560)
Q Consensus 872 ~i~~-~D~i~vl~~G~iv~~G~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 950 (1560)
.+.. ||+|++|++|+++..|+++++... ..
T Consensus 231 ~~~~~~d~i~~l~~G~i~~~g~~~~~~~~------~~------------------------------------------- 261 (520)
T TIGR03269 231 VIEDLSDKAIWLENGEIKEEGTPDEVVAV------FM------------------------------------------- 261 (520)
T ss_pred HHHHhcCEEEEEeCCEEeeecCHHHHHHH------HH-------------------------------------------
Confidence 9875 999999999999877655432110 00
Q ss_pred hhhhhhhhHHHhhhhHhhhhCCCCchhhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhh
Q 000406 951 KSKYFKSMQAEIQTVEEEQQKPRPRKFQLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLR 1030 (1560)
Q Consensus 951 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 1030 (1560)
T Consensus 262 -------------------------------------------------------------------------------- 261 (520)
T TIGR03269 262 -------------------------------------------------------------------------------- 261 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHH
Q 000406 1031 RDVRYLSLALVGLGFGCIIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVL 1110 (1560)
Q Consensus 1031 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l 1110 (1560)
.. - .+
T Consensus 262 -------------------------------------------------------~~--~------~~------------ 266 (520)
T TIGR03269 262 -------------------------------------------------------EG--V------SE------------ 266 (520)
T ss_pred -------------------------------------------------------hh--c------hh------------
Confidence 00 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhc
Q 000406 1111 GDRFSVLLMGLSSAAVGLGVSLVLNWRLTLVAAALTPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTF 1190 (1560)
Q Consensus 1111 ~~~l~~~l~~~~~~i~~l~~~~~~~~~l~lv~l~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf 1190 (1560)
T Consensus 267 -------------------------------------------------------------------------------- 266 (520)
T TIGR03269 267 -------------------------------------------------------------------------------- 266 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHH
Q 000406 1191 SAQEQIINSFDKALSEPKKKSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQ 1270 (1560)
Q Consensus 1191 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~ 1270 (1560)
T Consensus 267 -------------------------------------------------------------------------------- 266 (520)
T TIGR03269 267 -------------------------------------------------------------------------------- 266 (520)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhHHHHHHHHHHHHHHHHHhccCCccccccccccCCCCCccEEEEEEEEEcCC--CCCccceeeeeEEEeCCcEEEEE
Q 000406 1271 LAGLAPDTSMAATAIPAVLQITKRKPLIDNVKGRKLERSKPLGIELKMVTFTYPS--RPEVTVLKDFCLKVKGGSMVALV 1348 (1560)
Q Consensus 1271 l~~~~~~~~~~~~s~~ri~~i~~~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~--~~~~~vL~~vSf~I~~GE~vaIV 1348 (1560)
. .. ..+. . . ...-|+++||+++|+. +...++|+|+||+|++||++||+
T Consensus 267 -------~-------~~------~~~~-~------~---~~~~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~ 316 (520)
T TIGR03269 267 -------V-------EK------ECEV-E------V---GEPIIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIV 316 (520)
T ss_pred -------h-------cc------cccc-C------C---CCceEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEE
Confidence 0 00 0000 0 0 0124999999999953 11246999999999999999999
Q ss_pred cCCCCCHHHHHHHHhcccCCCccEEEEC-CE---ecCCCC---HHHHhhceEEEcCCCCCCC-ccHHHHHhcCCC-CCCH
Q 000406 1349 GGSGSGKSTVIWLIQRFYDPNQGKVMIE-GV---DLREIN---VKWLRKQTALVGQEPALFA-GTIRDNIALGNP-KASW 1419 (1560)
Q Consensus 1349 G~SGSGKSTLl~lL~rl~~p~~G~I~Id-Gv---di~~i~---l~~LR~~I~~VpQdp~LF~-gTIreNL~~g~~-~~sd 1419 (1560)
|+||||||||+++|+|+++|++|+|.++ |. ++...+ ...+|++|+||||++.+|. .|++||+.++.. ....
T Consensus 317 G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~ 396 (520)
T TIGR03269 317 GTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPD 396 (520)
T ss_pred CCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCH
Confidence 9999999999999999999999999996 64 334333 2346778999999998887 499999975311 1111
Q ss_pred ----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHH
Q 000406 1420 ----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDAL 1495 (1560)
Q Consensus 1420 ----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L 1495 (1560)
+++.++++..++.+. ..+.........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|
T Consensus 397 ~~~~~~~~~~l~~~~l~~~------~~~~~~~~~~~~LSgGq~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l 470 (520)
T TIGR03269 397 ELARMKAVITLKMVGFDEE------KAEEILDKYPDELSEGERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSI 470 (520)
T ss_pred HHHHHHHHHHHHhCCCCCc------cchhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHH
Confidence 123333333333110 0000123344579999999999999999999999999999999999999999999
Q ss_pred HHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1496 RKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1496 ~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
+++.+ +.|||+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 471 ~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 517 (520)
T TIGR03269 471 LKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDPEEIVE 517 (520)
T ss_pred HHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 98743 6899999999999876 99999999999999999998875
No 77
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-69 Score=681.16 Aligned_cols=456 Identities=21% Similarity=0.370 Sum_probs=349.7
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccH-HHHhcc
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQV-KWLRTQ 750 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~-~~lr~~ 750 (1560)
.|+++|++++|++ ..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+. ..+|++
T Consensus 4 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFPG---VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEECC---EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 4899999999963 358999999999999999999999999999999999999999999999999875543 456788
Q ss_pred EEEEecCCcCccc-cHHHHHhcCCCC-----CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHH
Q 000406 751 IGMVGQEPILFAT-SILENVLMGKEN-----ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALAR 824 (1560)
Q Consensus 751 i~~v~Q~~~lf~~-Tv~eNi~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialAR 824 (1560)
|+||+|++.+++. |++||+.++... ....+.. ..+.+.++.+ |++........+||||||||++|||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lar 153 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLN-----YEAREQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAK 153 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHH-----HHHHHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHH
Confidence 9999999988875 999999986421 1111111 1223445555 4544456677899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhhcch
Q 000406 825 AMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLERGGA 902 (1560)
Q Consensus 825 Al~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~~~~ 902 (1560)
||+.+|+||||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|+++..++..+...
T Consensus 154 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~---- 229 (501)
T PRK11288 154 ALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQVD---- 229 (501)
T ss_pred HHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccCC----
Confidence 9999999999999999999999999999998874 58999999999999876 99999999999986442110000
Q ss_pred HHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhhHhhhhCCCCchhhHHHH
Q 000406 903 YHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQTVEEEQQKPRPRKFQLSEI 982 (1560)
Q Consensus 903 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 982 (1560)
.. . +
T Consensus 230 -----------------------~~-------------------------~----------------------------~ 233 (501)
T PRK11288 230 -----------------------RD-------------------------Q----------------------------L 233 (501)
T ss_pred -----------------------HH-------------------------H----------------------------H
Confidence 00 0 0
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 983 WKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGWAG 1062 (1560)
Q Consensus 983 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 1062 (1560)
..
T Consensus 234 ~~------------------------------------------------------------------------------ 235 (501)
T PRK11288 234 VQ------------------------------------------------------------------------------ 235 (501)
T ss_pred HH------------------------------------------------------------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1063 TKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTLVA 1142 (1560)
Q Consensus 1063 ~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~lv~ 1142 (1560)
.+...+. .
T Consensus 236 -------------~~~~~~~---~-------------------------------------------------------- 243 (501)
T PRK11288 236 -------------AMVGREI---G-------------------------------------------------------- 243 (501)
T ss_pred -------------HhcCCCc---c--------------------------------------------------------
Confidence 0000000 0
Q ss_pred HHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 000406 1143 AALTPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILGLTL 1222 (1560)
Q Consensus 1143 l~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1222 (1560)
T Consensus 244 -------------------------------------------------------------------------------- 243 (501)
T PRK11288 244 -------------------------------------------------------------------------------- 243 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCcccccc
Q 000406 1223 GFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLIDNVK 1302 (1560)
Q Consensus 1223 ~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~~~~~ 1302 (1560)
. .....+.
T Consensus 244 ----------------------------------------------------------------~---~~~~~~~----- 251 (501)
T PRK11288 244 ----------------------------------------------------------------D---IYGYRPR----- 251 (501)
T ss_pred ----------------------------------------------------------------c---ccccccc-----
Confidence 0 0000000
Q ss_pred ccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCC
Q 000406 1303 GRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLRE 1382 (1560)
Q Consensus 1303 ~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~ 1382 (1560)
...+..++++||++. .+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++..
T Consensus 252 -----~~~~~~l~~~~~~~~-------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~~~ 319 (501)
T PRK11288 252 -----PLGEVRLRLDGLKGP-------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPIDI 319 (501)
T ss_pred -----CCCCcEEEEeccccC-------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEECCC
Confidence 001124889999842 38999999999999999999999999999999999999999999999999876
Q ss_pred CCH-HHHhhceEEEcCCCC---CC-CccHHHHHhcCCC-CC-------CHHHHHHHHHHHhHHHHHHhCCCCcc-ccccC
Q 000406 1383 INV-KWLRKQTALVGQEPA---LF-AGTIRDNIALGNP-KA-------SWAEIEEAAEEAYIHKFISSLPQGYE-TQVGE 1448 (1560)
Q Consensus 1383 i~l-~~LR~~I~~VpQdp~---LF-~gTIreNL~~g~~-~~-------sd~eI~~al~~a~l~~~I~~Lp~Gld-t~Vge 1448 (1560)
.+. +.+|+.++|+||++. +| ..|+.||+.++.. .. ...+. ...+.+++..+ |++ .....
T Consensus 320 ~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~ 392 (501)
T PRK11288 320 RSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWE-----AENADRFIRSL--NIKTPSREQ 392 (501)
T ss_pred CCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHH-----HHHHHHHHHhc--CcccCCccC
Confidence 543 456788999999973 55 4799999986421 10 11111 11223333333 221 12233
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCC
Q 000406 1449 SGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDG 1526 (1560)
Q Consensus 1449 ~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G 1526 (1560)
...+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. .+.|||+|||+++.+.. ||+|++|++|
T Consensus 393 ~~~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~~l~~g 472 (501)
T PRK11288 393 LIMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIVVMREG 472 (501)
T ss_pred ccccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEEEEECC
Confidence 344799999999999999999999999999999999999999999998864 47899999999999966 9999999999
Q ss_pred EEEEecCHHHHH
Q 000406 1527 AVVEYGSHETLL 1538 (1560)
Q Consensus 1527 ~IvE~Gt~~eLl 1538 (1560)
++++.|+++|..
T Consensus 473 ~i~~~~~~~~~~ 484 (501)
T PRK11288 473 RIAGELAREQAT 484 (501)
T ss_pred EEEEEEccccCC
Confidence 999999887754
No 78
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1.7e-67 Score=670.20 Aligned_cols=531 Identities=18% Similarity=0.195 Sum_probs=427.5
Q ss_pred HHHHHHhhh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 979 LSEIWKLQR-PEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGF 1057 (1560)
Q Consensus 979 ~~~l~~~~~-~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 1057 (1560)
.+.++++.+ +.++.++++++++++.+......|.++..+++. .... .. .....++++.++..++.++..++
T Consensus 5 ~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~----~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~ 76 (555)
T TIGR01194 5 IGEILALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHE----ENFL--GQ--GSLFSFGGLCLLALLFRIGADIF 76 (555)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCcc--cc--hHHHHHHHHHHHHHHHHHHHHHH
Confidence 456666777 788888888888777777666666665554331 1000 00 01112333444556677788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1058 CGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWR 1137 (1560)
Q Consensus 1058 ~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~ 1137 (1560)
...++.++..++|..+|++++++|+.||+ +.++|++++|+++|++.+++++.. ++.++..+++.++.++++++++|.
T Consensus 77 ~~~~~~~~~~~lR~~l~~~l~~~~~~~~~--~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 153 (555)
T TIGR01194 77 PAYAGMHIIANLRIALCEKILGAPIEEID--RRGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVP 153 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHH--hcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHH
Confidence 89999999999999999999999999987 689999999999999999998864 777888888888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchH--HHHHHHHHHHhhhHHHHHHH
Q 000406 1138 LTLVAAALTPFTLGASYLS-LIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQE--QIINSFDKALSEPKKKSVKR 1214 (1560)
Q Consensus 1138 l~lv~l~~ipl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~--~~~~~~~~~~~~~~~~~~~~ 1214 (1560)
+++++++++|+.++...+. .+........+....+..+.+.|.+.|++++|+|+.++ ...+++.+..++..+...+.
T Consensus 154 L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (555)
T TIGR01194 154 MFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIE 233 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999888888766655443 23323233335566778899999999999999999954 55778888888777776665
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhcc
Q 000406 1215 SQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKR 1294 (1560)
Q Consensus 1215 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~ 1294 (1560)
.........+...+..+...+.++++.+. |.+++|.+++++++...+..|+..+...+..+..+..+++|+.++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~ 310 (555)
T TIGR01194 234 ILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGER 310 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 55554444444444444444444554433 789999999999999999999999999999999999999999999753
Q ss_pred CCc--cc-ccc-ccc----cCCCCCccEEEEEEEEEcCCCC--CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhc
Q 000406 1295 KPL--ID-NVK-GRK----LERSKPLGIELKMVTFTYPSRP--EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQR 1364 (1560)
Q Consensus 1295 ~~~--~~-~~~-~~~----~~~~~~~~I~~~nVsf~Y~~~~--~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~r 1364 (1560)
..+ .. +.. ... ......+.|+|+||+|+|++.+ ..++|+|+||+|++||++|||||||||||||+++|+|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g 390 (555)
T TIGR01194 311 FNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCG 390 (555)
T ss_pred hccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhC
Confidence 211 11 000 000 0111235699999999997532 2369999999999999999999999999999999999
Q ss_pred ccCCCccEEEECCEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccc
Q 000406 1365 FYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYET 1444 (1560)
Q Consensus 1365 l~~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt 1444 (1560)
+|+|++|+|.+||+|+++++.+++|+++++|+||++||++|+++|+ .+++++++++++++.+++++++..+|+||||
T Consensus 391 ~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t 467 (555)
T TIGR01194 391 LYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDGGFST 467 (555)
T ss_pred CCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhcccccccCC
Confidence 9999999999999999999999999999999999999999999996 4578899999999999999999999999999
Q ss_pred cccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHH-h-cCCceEEEEecChHHHhhcCEEEE
Q 000406 1445 QVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRK-V-SKRATTIVVAHRLSTIREANMIAV 1522 (1560)
Q Consensus 1445 ~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~-~-~~~~TvI~IAHRlsti~~aDrIlV 1522 (1560)
. .+|||||||||+||||++++|+|||||||||+||++||+.|++.+.+ . .+++|+|+||||++++..||+|+|
T Consensus 468 ~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~ 542 (555)
T TIGR01194 468 T-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIK 542 (555)
T ss_pred c-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEE
Confidence 5 68999999999999999999999999999999999999999987743 3 468999999999999999999999
Q ss_pred EeCCEEEEe
Q 000406 1523 VRDGAVVEY 1531 (1560)
Q Consensus 1523 Ld~G~IvE~ 1531 (1560)
|++|+|+|.
T Consensus 543 l~~G~i~~~ 551 (555)
T TIGR01194 543 LAAGCIVKD 551 (555)
T ss_pred EECCEEEEe
Confidence 999999984
No 79
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=6.1e-69 Score=677.20 Aligned_cols=459 Identities=24% Similarity=0.375 Sum_probs=349.3
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC--CccEEEECCeecCCccHHH-Hhc
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP--TKGLITLDGHDLKSLQVKW-LRT 749 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~--~~G~I~i~g~~i~~~~~~~-lr~ 749 (1560)
|+++|++++|++ .++|+||||+|++||+++|+||||||||||+++|+|+++| ++|+|.++|+++...+... .++
T Consensus 2 l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFGG---VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeCC---eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 789999999963 4589999999999999999999999999999999999987 7999999999998766543 456
Q ss_pred cEEEEecCCcCccc-cHHHHHhcCCCC------CCHHHHHHHHHHhhhHHHHHhCCCCCCccc-CCCCCCCChHHHHHHH
Q 000406 750 QIGMVGQEPILFAT-SILENVLMGKEN------ATMKEAVAACKAASAHSFISELPLGYDTQV-GDRGTQLSGGQKQRIA 821 (1560)
Q Consensus 750 ~i~~v~Q~~~lf~~-Tv~eNi~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~-~~~g~~LSgGQrQRia 821 (1560)
+|+||+|++.++.. |++||+.++... ...++.. ..+.+.++.+ |+.... .....+||||||||++
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 151 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMY-----LRAKNLLREL--QLDADNVTRPVGDYGGGQQQLVE 151 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHH-----HHHHHHHHHc--CCCCCcccCchhhCCHHHHHHHH
Confidence 79999999988875 999999886421 1111111 1223445554 443322 3446789999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHh-cCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 822 LARAMIKDPRILLLDEPTSALDSESESIVQQAIDKI-SVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 822 lARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~-~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
|||||+.+|+||||||||++||+.+...+.+.|+++ .+|+|||+|||+++.+.. ||+|++|++|+++..|+++++...
T Consensus 152 iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 231 (500)
T TIGR02633 152 IAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMSED 231 (500)
T ss_pred HHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCCHH
Confidence 999999999999999999999999999999999887 358899999999999876 999999999999876543221000
Q ss_pred cchHHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhhHhhhhCCCCchhhH
Q 000406 900 GGAYHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQTVEEEQQKPRPRKFQL 979 (1560)
Q Consensus 900 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 979 (1560)
.
T Consensus 232 -----------------------------------------------------~-------------------------- 232 (500)
T TIGR02633 232 -----------------------------------------------------D-------------------------- 232 (500)
T ss_pred -----------------------------------------------------H--------------------------
Confidence 0
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 980 SEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCG 1059 (1560)
Q Consensus 980 ~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 1059 (1560)
. . ..+
T Consensus 233 --~----------------~-------------------~~~-------------------------------------- 237 (500)
T TIGR02633 233 --I----------------I-------------------TMM-------------------------------------- 237 (500)
T ss_pred --H----------------H-------------------HHH--------------------------------------
Confidence 0 0 000
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1060 WAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLT 1139 (1560)
Q Consensus 1060 ~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~ 1139 (1560)
+.. + ..
T Consensus 238 -------------------------~~~---~-------~~--------------------------------------- 243 (500)
T TIGR02633 238 -------------------------VGR---E-------IT--------------------------------------- 243 (500)
T ss_pred -------------------------hCc---c-------cc---------------------------------------
Confidence 000 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 000406 1140 LVAAALTPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILG 1219 (1560)
Q Consensus 1140 lv~l~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 1219 (1560)
T Consensus 244 -------------------------------------------------------------------------------- 243 (500)
T TIGR02633 244 -------------------------------------------------------------------------------- 243 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCccc
Q 000406 1220 LTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLID 1299 (1560)
Q Consensus 1220 ~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~~ 1299 (1560)
...+. .
T Consensus 244 -------------------------------------------------------------------------~~~~~-~ 249 (500)
T TIGR02633 244 -------------------------------------------------------------------------SLYPH-E 249 (500)
T ss_pred -------------------------------------------------------------------------ccccc-c
Confidence 00000 0
Q ss_pred cccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-CccEEEECCE
Q 000406 1300 NVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP-NQGKVMIEGV 1378 (1560)
Q Consensus 1300 ~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p-~~G~I~IdGv 1378 (1560)
. . . ....-|+++|++++|+.+.+..+|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.
T Consensus 250 ~-~--~---~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~~g~ 323 (500)
T TIGR02633 250 P-H--E---IGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFINGK 323 (500)
T ss_pred c-c--C---CCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEECCE
Confidence 0 0 0 001248999999999432123599999999999999999999999999999999999985 8999999999
Q ss_pred ecCCCCH-HHHhhceEEEcCCC---CCCC-ccHHHHHhcCCCC-------CCHHHHHHHHHHHhHHHHHHhCCCCccc-c
Q 000406 1379 DLREINV-KWLRKQTALVGQEP---ALFA-GTIRDNIALGNPK-------ASWAEIEEAAEEAYIHKFISSLPQGYET-Q 1445 (1560)
Q Consensus 1379 di~~i~l-~~LR~~I~~VpQdp---~LF~-gTIreNL~~g~~~-------~sd~eI~~al~~a~l~~~I~~Lp~Gldt-~ 1445 (1560)
++...+. ..+|++++||||++ .+|+ .|+++|+.++... ....+ ....+.+++..+ |+.. .
T Consensus 324 ~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~--~l~~~~ 396 (500)
T TIGR02633 324 PVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAA-----ELQIIGSAIQRL--KVKTAS 396 (500)
T ss_pred ECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHH-----HHHHHHHHHHhc--CccCCC
Confidence 9875543 56788999999996 3565 5999999874210 01111 112223333333 2211 1
Q ss_pred ccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEE
Q 000406 1446 VGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVV 1523 (1560)
Q Consensus 1446 Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVL 1523 (1560)
.......||||||||++|||||+.+|+||||||||++||+.+.+.+++.|+++. ++.|||+|||+++.+.. ||+|++|
T Consensus 397 ~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~v~~l 476 (500)
T TIGR02633 397 PFLPIGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLSDRVLVI 476 (500)
T ss_pred ccCccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEE
Confidence 223344799999999999999999999999999999999999999999998864 46899999999999976 9999999
Q ss_pred eCCEEEEecCHHH
Q 000406 1524 RDGAVVEYGSHET 1536 (1560)
Q Consensus 1524 d~G~IvE~Gt~~e 1536 (1560)
++|+++..++.++
T Consensus 477 ~~G~i~~~~~~~~ 489 (500)
T TIGR02633 477 GEGKLKGDFVNHA 489 (500)
T ss_pred ECCEEEEEEcccc
Confidence 9999998775443
No 80
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=7.1e-69 Score=604.02 Aligned_cols=473 Identities=30% Similarity=0.463 Sum_probs=365.0
Q ss_pred cEEEEEEEEEcCCC-CCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC-----CccEEEECCeecCCccHH
Q 000406 672 KIEFKGVTFAYPSR-PETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP-----TKGLITLDGHDLKSLQVK 745 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~-~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~-----~~G~I~i~g~~i~~~~~~ 745 (1560)
-++++|++..|... ....++++|||+|.+||++||||+||||||-..+.++|+++. -+|+|.++|.|+-..+..
T Consensus 6 lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~ 85 (534)
T COG4172 6 LLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASER 85 (534)
T ss_pred ceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHH
Confidence 47889998888532 245689999999999999999999999999999999999864 489999999999888877
Q ss_pred HHhc----cEEEEecCCcC--ccc-cHHHHH----hcCCCC---CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCC
Q 000406 746 WLRT----QIGMVGQEPIL--FAT-SILENV----LMGKEN---ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQ 811 (1560)
Q Consensus 746 ~lr~----~i~~v~Q~~~l--f~~-Tv~eNi----~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~ 811 (1560)
.+|+ +|++|+|||.- -+- ||..-| .....- ...+++.+.++.+++. + -...+...+.+
T Consensus 86 ~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~VgI~-------~-p~~rl~~yPHe 157 (534)
T COG4172 86 QLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELVGIP-------E-PEKRLDAYPHE 157 (534)
T ss_pred HHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHcCCC-------c-hhhhhhhCCcc
Confidence 7664 79999999953 221 554443 332211 1122233333333321 1 12345677899
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEE
Q 000406 812 LSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVV 888 (1560)
Q Consensus 812 LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv 888 (1560)
|||||||||.||.||+.+|++||-||||.|||......|.+.|+++. .|..+++||||+..++. ||||.||.+|+++
T Consensus 158 LSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~iv 237 (534)
T COG4172 158 LSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIV 237 (534)
T ss_pred cCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEe
Confidence 99999999999999999999999999999999999999999999884 48999999999999987 9999999999999
Q ss_pred EecChhhHhhhc-chHHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhhHh
Q 000406 889 EIGNHRQLLERG-GAYHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQTVEE 967 (1560)
Q Consensus 889 ~~G~~~~l~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 967 (1560)
|.|+.+++.+.. ..|....-..
T Consensus 238 E~~~t~~lF~~PqHpYTr~Ll~a--------------------------------------------------------- 260 (534)
T COG4172 238 ETGTTETLFAAPQHPYTRKLLAA--------------------------------------------------------- 260 (534)
T ss_pred ecCcHHHHhhCCCChHHHHHHhc---------------------------------------------------------
Confidence 999988776531 1121111000
Q ss_pred hhhCCCCchhhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHH
Q 000406 968 EQQKPRPRKFQLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGC 1047 (1560)
Q Consensus 968 ~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1047 (1560)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1048 IIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVG 1127 (1560)
Q Consensus 1048 ~~~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~ 1127 (1560)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhh
Q 000406 1128 LGVSLVLNWRLTLVAAALTPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEP 1207 (1560)
Q Consensus 1128 l~~~~~~~~~l~lv~l~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~ 1207 (1560)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Q 000406 1208 KKKSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPA 1287 (1560)
Q Consensus 1208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~r 1287 (1560)
T Consensus 261 -------------------------------------------------------------------------------- 260 (534)
T COG4172 261 -------------------------------------------------------------------------------- 260 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhccCCccccccccccCCCCCccEEEEEEEEEcCCCC--------CccceeeeeEEEeCCcEEEEEcCCCCCHHHHH
Q 000406 1288 VLQITKRKPLIDNVKGRKLERSKPLGIELKMVTFTYPSRP--------EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVI 1359 (1560)
Q Consensus 1288 i~~i~~~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~--------~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl 1359 (1560)
+|.-. ..+.+...+.-++.+||...|+-+. ...+.++|||++++||++||||.||||||||-
T Consensus 261 -------eP~g~---~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG 330 (534)
T COG4172 261 -------EPSGD---PPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLG 330 (534)
T ss_pred -------CCCCC---CCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHH
Confidence 00000 0000011122366666666664221 13489999999999999999999999999999
Q ss_pred HHHhcccCCCccEEEECCEecCCCCHHH---HhhceEEEcCCCC--CCC-ccHHHHHhcC----CCCCC----HHHHHHH
Q 000406 1360 WLIQRFYDPNQGKVMIEGVDLREINVKW---LRKQTALVGQEPA--LFA-GTIRDNIALG----NPKAS----WAEIEEA 1425 (1560)
Q Consensus 1360 ~lL~rl~~p~~G~I~IdGvdi~~i~l~~---LR~~I~~VpQdp~--LF~-gTIreNL~~g----~~~~s----d~eI~~a 1425 (1560)
.+|+|+.++. |+|.++|.++..++.++ +|+++-+|+|||+ |-+ .||-+-|.=| .|..+ ++.+.+|
T Consensus 331 ~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~a 409 (534)
T COG4172 331 LALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEA 409 (534)
T ss_pred HHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHH
Confidence 9999999876 99999999999998765 6899999999997 322 4666655433 34444 4557788
Q ss_pred HHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--Cce
Q 000406 1426 AEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RAT 1503 (1560)
Q Consensus 1426 l~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~T 1503 (1560)
++++|++.-... .-...||||||||||||||++-+|++++||||||+||....++|.+.|+++.+ +-+
T Consensus 410 L~EVGLDp~~r~----------RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~Ls 479 (534)
T COG4172 410 LEEVGLDPATRN----------RYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLS 479 (534)
T ss_pred HHHcCCChhHhh----------cCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCe
Confidence 888887654321 22457999999999999999999999999999999999999999999998754 468
Q ss_pred EEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhhccChHHH-HHHH
Q 000406 1504 TIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLASHLNGVYA-SLVR 1551 (1560)
Q Consensus 1504 vI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~-~l~~ 1551 (1560)
-++|+|+|..++. ||+|+||.+|+|||+|+.++++++ ....|. +|+.
T Consensus 480 YLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~-P~~~YT~~L~~ 528 (534)
T COG4172 480 YLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFAN-PQHEYTRALLA 528 (534)
T ss_pred EEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcC-CCcHHHHHHHH
Confidence 9999999999987 999999999999999999999985 455554 4443
No 81
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=9.1e-69 Score=675.31 Aligned_cols=465 Identities=19% Similarity=0.358 Sum_probs=355.8
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHh-cc
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLR-TQ 750 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr-~~ 750 (1560)
.|+++|++++|++ ..+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...++ ..
T Consensus 11 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 11 LLCARSISKQYSG---VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred eEEEEeEEEEeCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 5999999999963 4589999999999999999999999999999999999999999999999999877665544 57
Q ss_pred EEEEecCCcCccc-cHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccC
Q 000406 751 IGMVGQEPILFAT-SILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKD 829 (1560)
Q Consensus 751 i~~v~Q~~~lf~~-Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~ 829 (1560)
++||+|++.++.. |++||+.++.... .+..+ .+.+.++.+ |++........+||||||||++|||||+.+
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~~--~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~aL~~~ 158 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPKR--QASMQ-----KMKQLLAAL--GCQLDLDSSAGSLEVADRQIVEILRGLMRD 158 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhcccccc--hHHHH-----HHHHHHHHc--CCCccccCChhhCCHHHHHHHHHHHHHHcC
Confidence 9999999988875 9999999875321 11111 122334444 555555677789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhhcchHHHHH
Q 000406 830 PRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLERGGAYHDLV 907 (1560)
Q Consensus 830 p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~~~~~~~l~ 907 (1560)
|+||||||||++||+.+...+.+.|+++. +|+|||+|||+++.+.. ||+|++|++|++++.|+++++.... ..
T Consensus 159 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~-----~~ 233 (510)
T PRK15439 159 SRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDD-----II 233 (510)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHH-----HH
Confidence 99999999999999999999999998873 58999999999999866 9999999999999988876653210 00
Q ss_pred HHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhhHhhhhCCCCchhhHHHHHHhhh
Q 000406 908 KLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQTVEEEQQKPRPRKFQLSEIWKLQR 987 (1560)
Q Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 987 (1560)
...
T Consensus 234 ~~~----------------------------------------------------------------------------- 236 (510)
T PRK15439 234 QAI----------------------------------------------------------------------------- 236 (510)
T ss_pred HHH-----------------------------------------------------------------------------
Confidence 000
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 988 PEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGWAGTKLTM 1067 (1560)
Q Consensus 988 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 1067 (1560)
......
T Consensus 237 ----------------------------------~~~~~~---------------------------------------- 242 (510)
T PRK15439 237 ----------------------------------TPAARE---------------------------------------- 242 (510)
T ss_pred ----------------------------------hCcccc----------------------------------------
Confidence 000000
Q ss_pred HHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1068 RVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTLVAAALTP 1147 (1560)
Q Consensus 1068 ~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~lv~l~~ip 1147 (1560)
....-.+.
T Consensus 243 ------------~~~~~~~~------------------------------------------------------------ 250 (510)
T PRK15439 243 ------------KSLSASQK------------------------------------------------------------ 250 (510)
T ss_pred ------------cccccccc------------------------------------------------------------
Confidence 00000000
Q ss_pred HHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Q 000406 1148 FTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILGLTLGFSQG 1227 (1560)
Q Consensus 1148 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1227 (1560)
.
T Consensus 251 -----------------------------------------------------------~-------------------- 251 (510)
T PRK15439 251 -----------------------------------------------------------L-------------------- 251 (510)
T ss_pred -----------------------------------------------------------c--------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCccccccccccC
Q 000406 1228 AMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLIDNVKGRKLE 1307 (1560)
Q Consensus 1228 ~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~~~~~~~~~~ 1307 (1560)
. ...+..... .+
T Consensus 252 --------------------------------------------------------------~-~~~~~~~~~-----~~ 263 (510)
T PRK15439 252 --------------------------------------------------------------W-LELPGNRRQ-----QA 263 (510)
T ss_pred --------------------------------------------------------------c-ccccccccc-----cC
Confidence 0 000000000 00
Q ss_pred CCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHH
Q 000406 1308 RSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKW 1387 (1560)
Q Consensus 1308 ~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~ 1387 (1560)
..+.-|+++|++. .+|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+...
T Consensus 264 -~~~~~l~~~~l~~--------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~ 334 (510)
T PRK15439 264 -AGAPVLTVEDLTG--------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINALSTAQ 334 (510)
T ss_pred -CCCceEEEeCCCC--------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCCCHHH
Confidence 0112489999983 1599999999999999999999999999999999999999999999999998777654
Q ss_pred -HhhceEEEcCCC---CCCC-ccHHHHHhcCC----CC-CCHHHHHHHHHHHhHHHHHHhCCCCcc-ccccCCCCCCChH
Q 000406 1388 -LRKQTALVGQEP---ALFA-GTIRDNIALGN----PK-ASWAEIEEAAEEAYIHKFISSLPQGYE-TQVGESGVQLSGG 1456 (1560)
Q Consensus 1388 -LR~~I~~VpQdp---~LF~-gTIreNL~~g~----~~-~sd~eI~~al~~a~l~~~I~~Lp~Gld-t~Vge~G~~LSGG 1456 (1560)
+|+.|+||||++ .+|. .|+.+|+.... +. ....+. ...+.+++..+ |++ .........||||
T Consensus 335 ~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~~LSgG 407 (510)
T PRK15439 335 RLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARE-----NAVLERYRRAL--NIKFNHAEQAARTLSGG 407 (510)
T ss_pred HHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHH-----HHHHHHHHHHc--CCCCCCccCccccCCcH
Confidence 467899999996 3665 59999985320 10 011111 11233344443 332 2233444579999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCH
Q 000406 1457 QKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSH 1534 (1560)
Q Consensus 1457 QrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~ 1534 (1560)
||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+|+..|++
T Consensus 408 ~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~i~~~~~~ 487 (510)
T PRK15439 408 NQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGEISGALTG 487 (510)
T ss_pred HHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEEcc
Confidence 9999999999999999999999999999999999999999864 47899999999999976 999999999999999998
Q ss_pred HHHHh
Q 000406 1535 ETLLA 1539 (1560)
Q Consensus 1535 ~eLl~ 1539 (1560)
+++..
T Consensus 488 ~~~~~ 492 (510)
T PRK15439 488 AAINV 492 (510)
T ss_pred ccCCH
Confidence 87764
No 82
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-68 Score=668.23 Aligned_cols=452 Identities=21% Similarity=0.334 Sum_probs=347.0
Q ss_pred EEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccH-HHHhccEEE
Q 000406 675 FKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQV-KWLRTQIGM 753 (1560)
Q Consensus 675 ~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~-~~lr~~i~~ 753 (1560)
++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+. ..++++++|
T Consensus 1 ~~nl~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 77 (491)
T PRK10982 1 MSNISKSFPG---VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISM 77 (491)
T ss_pred CCceEEEeCC---EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEE
Confidence 3689999963 458999999999999999999999999999999999999999999999999876543 345778999
Q ss_pred EecCCcCccc-cHHHHHhcCCCC-----CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhc
Q 000406 754 VGQEPILFAT-SILENVLMGKEN-----ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMI 827 (1560)
Q Consensus 754 v~Q~~~lf~~-Tv~eNi~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~ 827 (1560)
|+|++.++.. ||+||+.++... ...++.. ..+.+.++.+ |++........+||||||||++|||||+
T Consensus 78 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~ 150 (491)
T PRK10982 78 VHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMY-----RDTKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFS 150 (491)
T ss_pred EecccccccCCCHHHHhhcccccccccccCHHHHH-----HHHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHH
Confidence 9999987764 999999876421 1111111 1223445554 5555567778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhhcchHHH
Q 000406 828 KDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLERGGAYHD 905 (1560)
Q Consensus 828 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~~~~~~~ 905 (1560)
.+|+||||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++++... +
T Consensus 151 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-----~ 225 (491)
T PRK10982 151 YNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMD-----K 225 (491)
T ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHH-----H
Confidence 9999999999999999999999999998873 58999999999999875 999999999999987765432100 0
Q ss_pred HHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhhHhhhhCCCCchhhHHHHHHh
Q 000406 906 LVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQTVEEEQQKPRPRKFQLSEIWKL 985 (1560)
Q Consensus 906 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 985 (1560)
...
T Consensus 226 ~~~----------------------------------------------------------------------------- 228 (491)
T PRK10982 226 IIA----------------------------------------------------------------------------- 228 (491)
T ss_pred HHH-----------------------------------------------------------------------------
Confidence 000
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 986 QRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGWAGTKL 1065 (1560)
Q Consensus 986 ~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 1065 (1560)
T Consensus 229 -------------------------------------------------------------------------------- 228 (491)
T PRK10982 229 -------------------------------------------------------------------------------- 228 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1066 TMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTLVAAAL 1145 (1560)
Q Consensus 1066 ~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~lv~l~~ 1145 (1560)
.+...++.
T Consensus 229 ----------~~~~~~~~-------------------------------------------------------------- 236 (491)
T PRK10982 229 ----------MMVGRSLT-------------------------------------------------------------- 236 (491)
T ss_pred ----------HHhCCCcc--------------------------------------------------------------
Confidence 00000000
Q ss_pred HHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHH
Q 000406 1146 TPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILGLTLGFS 1225 (1560)
Q Consensus 1146 ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1225 (1560)
T Consensus 237 -------------------------------------------------------------------------------- 236 (491)
T PRK10982 237 -------------------------------------------------------------------------------- 236 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCccccccccc
Q 000406 1226 QGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLIDNVKGRK 1305 (1560)
Q Consensus 1226 ~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~~~~~~~~ 1305 (1560)
. ..++. ..
T Consensus 237 -------------------------------------------------------------~-----~~~~~-~~----- 244 (491)
T PRK10982 237 -------------------------------------------------------------Q-----RFPDK-EN----- 244 (491)
T ss_pred -------------------------------------------------------------c-----ccccc-cC-----
Confidence 0 00000 00
Q ss_pred cCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCH
Q 000406 1306 LERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINV 1385 (1560)
Q Consensus 1306 ~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l 1385 (1560)
.+.+..|+++||++.| .++|+||||+|++||++||+|+||||||||+++|+|+.+|++|+|.++|.++...+.
T Consensus 245 --~~~~~~i~~~~l~~~~-----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~ 317 (491)
T PRK10982 245 --KPGEVILEVRNLTSLR-----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHNA 317 (491)
T ss_pred --CCCCcEEEEeCccccc-----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCCH
Confidence 0012248999999875 148999999999999999999999999999999999999999999999999987765
Q ss_pred H-HHhhceEEEcCCCC---CCC-ccHHHH-----HhcCCCC---CCHHHHHHHHHHHhHHHHHHhCCCCcc-ccccCCCC
Q 000406 1386 K-WLRKQTALVGQEPA---LFA-GTIRDN-----IALGNPK---ASWAEIEEAAEEAYIHKFISSLPQGYE-TQVGESGV 1451 (1560)
Q Consensus 1386 ~-~LR~~I~~VpQdp~---LF~-gTIreN-----L~~g~~~---~sd~eI~~al~~a~l~~~I~~Lp~Gld-t~Vge~G~ 1451 (1560)
. .+|+.++|+||++. +|. .|+.+| +...... .+..+.. ..+.+++..+ |+. -.......
T Consensus 318 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~ 390 (491)
T PRK10982 318 NEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMK-----SDTQWVIDSM--RVKTPGHRTQIG 390 (491)
T ss_pred HHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHH-----HHHHHHHHhc--CccCCCcccccc
Confidence 4 45778999999963 555 477766 3321110 1111111 1223334443 221 11234445
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEE
Q 000406 1452 QLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVV 1529 (1560)
Q Consensus 1452 ~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~Iv 1529 (1560)
.||||||||++||||++.+|+||||||||++||+.+.+.|.+.|+++. +++|||+|||+++.+.. ||||++|++|+++
T Consensus 391 ~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~g~i~ 470 (491)
T PRK10982 391 SLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSNGLVA 470 (491)
T ss_pred cCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEECCEEE
Confidence 799999999999999999999999999999999999999999998754 57899999999999875 9999999999999
Q ss_pred EecCHHH
Q 000406 1530 EYGSHET 1536 (1560)
Q Consensus 1530 E~Gt~~e 1536 (1560)
..++.++
T Consensus 471 ~~~~~~~ 477 (491)
T PRK10982 471 GIVDTKT 477 (491)
T ss_pred EEEcccc
Confidence 8886643
No 83
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=7.3e-66 Score=655.32 Aligned_cols=535 Identities=17% Similarity=0.127 Sum_probs=430.9
Q ss_pred cHHHHHHHhhhhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 000406 331 GLFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAY 410 (1560)
Q Consensus 331 ~~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 410 (1560)
..+.+++|++...++.++++++++++.+++....+++++.+++... .. .. . .+..++++.++.+++.+
T Consensus 4 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~----~~--~~--~----~~~~~~~~~~~~~~~~~ 71 (555)
T TIGR01194 4 AIGEILALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEEN----FL--GQ--G----SLFSFGGLCLLALLFRI 71 (555)
T ss_pred hHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----cc--cc--h----HHHHHHHHHHHHHHHHH
Confidence 3566777766245566677777777777777777777776654211 00 00 0 11123334455566778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 411 LEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFL 490 (1560)
Q Consensus 411 l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~ 490 (1560)
+..++....+.++..++|.+++++++++|+.+|+.. ++|++++|+++|++.+++.+.. +..++..++++++.++++++
T Consensus 72 ~~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~-~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~ 149 (555)
T TIGR01194 72 GADIFPAYAGMHIIANLRIALCEKILGAPIEEIDRR-GAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAY 149 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHhc-CcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 888888899999999999999999999999999765 8999999999999999998864 77788888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH--HHHHHHHHHHHhHhHH
Q 000406 491 RSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAED--HFAVRYAGLLADSIPF 568 (1560)
Q Consensus 491 ~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~--~~~~~~~~~~~~~~~~ 568 (1560)
++|.+++++++++|+.+++..+..++..+...+.++..++..+.+.|.+.|+++||+|+.++ ...+++.+..++..+.
T Consensus 150 ~~~~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~ 229 (555)
T TIGR01194 150 LSVPMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADL 229 (555)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHH
Confidence 99999999888888877777777666667777777788888999999999999999999954 5567787777776665
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 569 GAKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFE 648 (1560)
Q Consensus 569 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~ 648 (1560)
..+..........+..++.++...+.++++.+. +.++.|.++++..+...+..|+..+...+..+.++..+++|+.+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ 306 (555)
T TIGR01194 230 HIIEILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLAD 306 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555444444333433444444444444454433 68999999999988888889999999999999999999999999
Q ss_pred HHccCCCCCCC--CCC-CC----cCCCCcccEEEEEEEEEcCCCC--CccccccceeEecCCCEEEEecCCCCChHHHHH
Q 000406 649 IIDRVPEIDPY--NSE-GR----KLSSVSGKIEFKGVTFAYPSRP--ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFA 719 (1560)
Q Consensus 649 ~l~~~~~~~~~--~~~-~~----~~~~~~g~i~~~~vs~~y~~~~--~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ 719 (1560)
+++..++.++. ... .. ......+.|+++||+|+|++.+ ..++|+|+||+|++||+++|+||||||||||++
T Consensus 307 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ 386 (555)
T TIGR01194 307 FGERFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAK 386 (555)
T ss_pred HHhhhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHH
Confidence 98632111010 000 00 0112246799999999997532 236899999999999999999999999999999
Q ss_pred HHhcCCCCCccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCC
Q 000406 720 LIERFYDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPL 799 (1560)
Q Consensus 720 ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~ 799 (1560)
+|+|+++|++|+|.+||.++++++...+|+.++||+|++++|++|+++|+ .++.++++++++++.+++++++..+|+
T Consensus 387 ll~g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~ 463 (555)
T TIGR01194 387 LFCGLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDG 463 (555)
T ss_pred HHhCCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhccccc
Confidence 99999999999999999999999999999999999999999999999995 345678889999999999999999999
Q ss_pred CCCcccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHH-Hh-cCCcEEEEEecCccccccCC
Q 000406 800 GYDTQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAID-KI-SVGRTTIVIAHRLATVKNAN 877 (1560)
Q Consensus 800 gl~t~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~-~~-~~~~tvi~itH~l~~i~~~D 877 (1560)
|++|. .+|||||||||+||||++++|+|||||||||+||+++++.+.+.+. .+ .+++|+|+||||++.+..||
T Consensus 464 g~~t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d 538 (555)
T TIGR01194 464 GFSTT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELAD 538 (555)
T ss_pred ccCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCC
Confidence 99984 6899999999999999999999999999999999999999988764 34 46899999999999998999
Q ss_pred EEEEEeCCeEEEe
Q 000406 878 TIVVLDQGSVVEI 890 (1560)
Q Consensus 878 ~i~vl~~G~iv~~ 890 (1560)
+|++|++|+++|.
T Consensus 539 ~i~~l~~G~i~~~ 551 (555)
T TIGR01194 539 QIIKLAAGCIVKD 551 (555)
T ss_pred EEEEEECCEEEEe
Confidence 9999999999875
No 84
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=5.4e-67 Score=716.28 Aligned_cols=212 Identities=23% Similarity=0.372 Sum_probs=180.3
Q ss_pred cEEEEEEEEEcCCCC-CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC---CCccEEEECCEecCCCCHHHH
Q 000406 1313 GIELKMVTFTYPSRP-EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD---PNQGKVMIEGVDLREINVKWL 1388 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~-~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~---p~~G~I~IdGvdi~~i~l~~L 1388 (1560)
.++++||++.|+.++ ++.+|+|||++|++||++||+||||||||||+++|+|+.+ |++|+|.+||.++. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~ 834 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSF 834 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhh
Confidence 379999999996322 3469999999999999999999999999999999999998 78899999999985 257
Q ss_pred hhceEEEcCCCC-CCCccHHHHHhcCC----C-CCCHHH----HHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1389 RKQTALVGQEPA-LFAGTIRDNIALGN----P-KASWAE----IEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1389 R~~I~~VpQdp~-LF~gTIreNL~~g~----~-~~sd~e----I~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
|+.++||||++. ++..||||||.++. | ..++++ +.++++..++ .+..|+.||+.|.+||||||
T Consensus 835 ~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L-------~~~~d~~v~~~~~~LSgGqr 907 (1394)
T TIGR00956 835 QRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEM-------ESYADAVVGVPGEGLNVEQR 907 (1394)
T ss_pred hcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCC-------hhhCCCeeCCCCCCCCHHHh
Confidence 899999999875 55679999998641 2 233333 3444444443 34578999988889999999
Q ss_pred HHHHHHHHHccCCC-EEEEeCCCcCCCHHHHHHHHHHHHHh-cCCceEEEEecChHHH--hhcCEEEEEeCC-EEEEecC
Q 000406 1459 QRIAIARAILKGSR-VLLLDEASSALDLESEKHVQDALRKV-SKRATTIVVAHRLSTI--REANMIAVVRDG-AVVEYGS 1533 (1560)
Q Consensus 1459 QRLaLARALLr~p~-ILILDEaTSaLD~~Te~~I~~~L~~~-~~~~TvI~IAHRlsti--~~aDrIlVLd~G-~IvE~Gt 1533 (1560)
||++|||||+.+|+ ||+||||||+||+.+...|++.|+++ .+++|||+++|+++.. ..+|+|++|++| +++++|+
T Consensus 908 qRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~ 987 (1394)
T TIGR00956 908 KRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGD 987 (1394)
T ss_pred hHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECC
Confidence 99999999999997 99999999999999999999999987 4679999999999974 569999999997 9999998
Q ss_pred HH
Q 000406 1534 HE 1535 (1560)
Q Consensus 1534 ~~ 1535 (1560)
+.
T Consensus 988 ~~ 989 (1394)
T TIGR00956 988 LG 989 (1394)
T ss_pred cc
Confidence 63
No 85
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5e-68 Score=602.67 Aligned_cols=490 Identities=30% Similarity=0.427 Sum_probs=413.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Q 000406 415 CWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFIC-GYTVGFLRSW 493 (1560)
Q Consensus 415 ~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~-~~ii~~~~s~ 493 (1560)
++...++.+...+--+.|.+++++++.|+-++ .+|.+..-+.....-|+..+...+.+.+..++-+.. +.++...++|
T Consensus 5 ~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r-~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~ 83 (497)
T COG5265 5 LFSPVGQIAVRVLAYVTFFHLHSLSLRFHLER-RTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGW 83 (497)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhcchhhhhhc-ccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhccc
Confidence 44556777777888889999999999998544 667665544444444555554445555544444433 3344456789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhHHH
Q 000406 494 KVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKLG 573 (1560)
Q Consensus 494 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k~~ 573 (1560)
+.+++.++++.+++++......+.....+......+++.+...++|-+.+|+|.|+.|+.+..+|...++.+.+...|..
T Consensus 84 ~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~ 163 (497)
T COG5265 84 WFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVH 163 (497)
T ss_pred HHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHH
Confidence 98888888877777665555555556666677777888889999999999999999999999999999999988777765
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 000406 574 FAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIIDRV 653 (1560)
Q Consensus 574 ~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~~~ 653 (1560)
...++....-..+......+....++..+..|.+|.|+++....++...+.|+..+...+.++.++..-.++.+++++.+
T Consensus 164 ~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~ 243 (497)
T COG5265 164 VSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVE 243 (497)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccc
Confidence 54443333223333333444455667778899999999999888888888899998899999999999999999999865
Q ss_pred CCCCCCCCCCCcCC-CCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEE
Q 000406 654 PEIDPYNSEGRKLS-SVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLI 732 (1560)
Q Consensus 654 ~~~~~~~~~~~~~~-~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I 732 (1560)
.+.... ...+..+ -..|.+.|++|+|.|.. .+++|+++||++++|+++||||+||+||||++++|.|+|++++|.|
T Consensus 244 ~~v~d~-pda~~L~~~~~g~v~F~~V~F~y~~--~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I 320 (497)
T COG5265 244 AEVSDA-PDAPPLWPVRLGAVAFINVSFAYDP--RRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSI 320 (497)
T ss_pred hhhccC-CCCccccccccceEEEEEEEeeccc--cchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceE
Confidence 554322 2222222 34688999999999974 4689999999999999999999999999999999999999999999
Q ss_pred EECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCC
Q 000406 733 TLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQL 812 (1560)
Q Consensus 733 ~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~L 812 (1560)
.+||+|+++...+.+|+.||+||||..||++|+..||.+|++..+++++..+++.++++++|+.+|+|++|.+||+|-.|
T Consensus 321 ~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerglkl 400 (497)
T COG5265 321 TIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKL 400 (497)
T ss_pred EEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecC
Q 000406 813 SGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGN 892 (1560)
Q Consensus 813 SgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~ 892 (1560)
||||||||||||+++++|+||+|||+||+||.+||+.++..|++..+|+|.++|+|||+++.+||.|+||++|+|+|.|+
T Consensus 401 Sggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~ 480 (497)
T COG5265 401 SGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGT 480 (497)
T ss_pred cCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHhhhcchHHHHHH
Q 000406 893 HRQLLERGGAYHDLVK 908 (1560)
Q Consensus 893 ~~~l~~~~~~~~~l~~ 908 (1560)
|++|+..+|.|++||.
T Consensus 481 h~~ll~~~g~ya~mw~ 496 (497)
T COG5265 481 HEELLAAGGLYAEMWR 496 (497)
T ss_pred HHHHHHcCChHHHHhc
Confidence 9999999999999984
No 86
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=2.1e-67 Score=661.70 Aligned_cols=452 Identities=20% Similarity=0.263 Sum_probs=341.9
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|++ ..+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 3 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i 79 (490)
T PRK10938 3 SLQISQGTFRLSD---TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLV 79 (490)
T ss_pred eEEEEeEEEEcCC---eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHh
Confidence 3899999999963 3489999999999999999999999999999999999999999999999888766666667789
Q ss_pred EEEecCCcC--c-------cccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHH
Q 000406 752 GMVGQEPIL--F-------ATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIAL 822 (1560)
Q Consensus 752 ~~v~Q~~~l--f-------~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRial 822 (1560)
+|++|++.+ + ..|+++|+.++.. ..+++. +.++.+ |++...+....+||||||||++|
T Consensus 80 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~---------~~l~~~--~l~~~~~~~~~~LSgG~~qrv~l 146 (490)
T PRK10938 80 SDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK--DPARCE---------QLAQQF--GITALLDRRFKYLSTGETRKTLL 146 (490)
T ss_pred ceeccCcchhhcccchhhccccHHHhcccchh--HHHHHH---------HHHHHc--CCHhhhhCCcccCCHHHHHHHHH
Confidence 999998753 2 3488998765311 111222 233333 45445566778999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhhc
Q 000406 823 ARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLERG 900 (1560)
Q Consensus 823 ARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~~ 900 (1560)
||||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|+++..|+++++....
T Consensus 147 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 226 (490)
T PRK10938 147 CQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQA 226 (490)
T ss_pred HHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcch
Confidence 999999999999999999999999999999998874 47899999999999876 9999999999999988766543210
Q ss_pred chHHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhhHhhhhCCCCchhhHH
Q 000406 901 GAYHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQTVEEEQQKPRPRKFQLS 980 (1560)
Q Consensus 901 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 980 (1560)
... . .. .
T Consensus 227 -----~~~--------------------------------------------~----~~----~---------------- 233 (490)
T PRK10938 227 -----LVA--------------------------------------------Q----LA----H---------------- 233 (490)
T ss_pred -----hhh--------------------------------------------h----hh----h----------------
Confidence 000 0 00 0
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 981 EIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGW 1060 (1560)
Q Consensus 981 ~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1060 (1560)
.
T Consensus 234 ------------------------------------------~------------------------------------- 234 (490)
T PRK10938 234 ------------------------------------------S------------------------------------- 234 (490)
T ss_pred ------------------------------------------h-------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1061 AGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTL 1140 (1560)
Q Consensus 1061 ~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~l 1140 (1560)
+++ . + .+. +.
T Consensus 235 --------------~~~-~-~---~~~---~~------------------------------------------------ 244 (490)
T PRK10938 235 --------------EQL-E-G---VQL---PE------------------------------------------------ 244 (490)
T ss_pred --------------hcc-C-c---ccc---Cc------------------------------------------------
Confidence 000 0 0 000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 000406 1141 VAAALTPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILGL 1220 (1560)
Q Consensus 1141 v~l~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1220 (1560)
T Consensus 245 -------------------------------------------------------------------------------- 244 (490)
T PRK10938 245 -------------------------------------------------------------------------------- 244 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCcccc
Q 000406 1221 TLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLIDN 1300 (1560)
Q Consensus 1221 ~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~~~ 1300 (1560)
.. ++....
T Consensus 245 -----------------------------------------------------------------------~~-~~~~~~ 252 (490)
T PRK10938 245 -----------------------------------------------------------------------PD-EPSARH 252 (490)
T ss_pred -----------------------------------------------------------------------cc-cccccc
Confidence 00 000000
Q ss_pred ccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-CccEEEECCEe
Q 000406 1301 VKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP-NQGKVMIEGVD 1379 (1560)
Q Consensus 1301 ~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p-~~G~I~IdGvd 1379 (1560)
. .. ....-|+++||++.|++ ..+|+|+||+|++||++||+|+||||||||+++|+|+.+| ++|+|.++|.+
T Consensus 253 -~-~~---~~~~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~~ 324 (490)
T PRK10938 253 -A-LP---ANEPRIVLNNGVVSYND---RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGRR 324 (490)
T ss_pred -c-cC---CCCceEEEeceEEEECC---eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEeccc
Confidence 0 00 01224999999999963 3599999999999999999999999999999999999876 69999999987
Q ss_pred cCC-CCHHHHhhceEEEcCCCCCCC---ccHHHHHhcCCC-------CCCH---HHHHHHHHHHhHHHHHHhCCCCcccc
Q 000406 1380 LRE-INVKWLRKQTALVGQEPALFA---GTIRDNIALGNP-------KASW---AEIEEAAEEAYIHKFISSLPQGYETQ 1445 (1560)
Q Consensus 1380 i~~-i~l~~LR~~I~~VpQdp~LF~---gTIreNL~~g~~-------~~sd---~eI~~al~~a~l~~~I~~Lp~Gldt~ 1445 (1560)
+.. .+...+|++|+|+||++.++. .|+++++.++.. .... +++.++++..++.+. .
T Consensus 325 ~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~ 394 (490)
T PRK10938 325 RGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKR----------T 394 (490)
T ss_pred CCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchh----------h
Confidence 632 233456889999999986642 467777653210 0111 233444444433210 2
Q ss_pred ccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC-C-ceEEEEecChHHHhh--cCEEE
Q 000406 1446 VGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK-R-ATTIVVAHRLSTIRE--ANMIA 1521 (1560)
Q Consensus 1446 Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~-~-~TvI~IAHRlsti~~--aDrIl 1521 (1560)
.......||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++.+ + .|||+|||+++.+.. ||+|+
T Consensus 395 ~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~v~ 474 (490)
T PRK10938 395 ADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHRLE 474 (490)
T ss_pred ccCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhheeEE
Confidence 2333457999999999999999999999999999999999999999999998753 3 469999999999974 79999
Q ss_pred EEeCCEEEEe
Q 000406 1522 VVRDGAVVEY 1531 (1560)
Q Consensus 1522 VLd~G~IvE~ 1531 (1560)
+|++|+|++.
T Consensus 475 ~l~~G~i~~~ 484 (490)
T PRK10938 475 FVPDGDIYRY 484 (490)
T ss_pred EecCCceEEe
Confidence 9999999875
No 87
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-66 Score=655.50 Aligned_cols=484 Identities=20% Similarity=0.319 Sum_probs=342.8
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. .+|+
T Consensus 2 l~i~~ls~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~~~-----------~~i~ 67 (530)
T PRK15064 2 LSTANITMQFGA---KPLFENISVKFGGGNRYGLIGANGCGKSTFMKILGGDLEPSAGNVSLDPN-----------ERLG 67 (530)
T ss_pred EEEEEEEEEeCC---cEeEeCCEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEEE
Confidence 789999999963 45999999999999999999999999999999999999999999999873 3699
Q ss_pred EEecCCcCccc-cHHHHHhcCCCCC----------------CHH------HHHH-------HHHHhhhHHHHHhCCCCCC
Q 000406 753 MVGQEPILFAT-SILENVLMGKENA----------------TMK------EAVA-------ACKAASAHSFISELPLGYD 802 (1560)
Q Consensus 753 ~v~Q~~~lf~~-Tv~eNi~~g~~~~----------------~~~------~~~~-------~~~~~~~~~~i~~l~~gl~ 802 (1560)
|++|++.++.. |++||+.++.... ... +..+ ......+.+.++.+ |+.
T Consensus 68 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~ 145 (530)
T PRK15064 68 KLRQDQFAFEEFTVLDTVIMGHTELWEVKQERDRIYALPEMSEEDGMKVADLEVKFAEMDGYTAEARAGELLLGV--GIP 145 (530)
T ss_pred EEeccCCcCCCCcHHHHHHHhhHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHhcCchhHHHHHHHHHHhC--CCC
Confidence 99999988865 9999998753100 000 0000 00012233455555 554
Q ss_pred ccc-CCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEE
Q 000406 803 TQV-GDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIV 880 (1560)
Q Consensus 803 t~~-~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~ 880 (1560)
... .....+||||||||++|||||+.+|+||||||||++||+.+...+.+.|.+ .+.|||+|||+++.+.. ||+|+
T Consensus 146 ~~~~~~~~~~LSgGq~qrv~lA~aL~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~--~~~tiiivsHd~~~~~~~~d~i~ 223 (530)
T PRK15064 146 EEQHYGLMSEVAPGWKLRVLLAQALFSNPDILLLDEPTNNLDINTIRWLEDVLNE--RNSTMIIISHDRHFLNSVCTHMA 223 (530)
T ss_pred hhHhcCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHh--CCCeEEEEeCCHHHHHhhcceEE
Confidence 322 345679999999999999999999999999999999999999999999975 47999999999999876 99999
Q ss_pred EEeCCeEE-EecChhhHhhhcchHHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhH
Q 000406 881 VLDQGSVV-EIGNHRQLLERGGAYHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQ 959 (1560)
Q Consensus 881 vl~~G~iv-~~G~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 959 (1560)
+|++|+++ +.|+++++++.......... . . ..
T Consensus 224 ~l~~g~i~~~~g~~~~~~~~~~~~~~~~~-------------~----~------------------------~~------ 256 (530)
T PRK15064 224 DLDYGELRVYPGNYDEYMTAATQARERLL-------------A----D------------------------NA------ 256 (530)
T ss_pred EEeCCEEEEecCCHHHHHHHHHHHHHHHH-------------H----H------------------------HH------
Confidence 99999994 78888876532100000000 0 0 00
Q ss_pred HHhhhhHhhhhCCCCchhhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHH
Q 000406 960 AEIQTVEEEQQKPRPRKFQLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLA 1039 (1560)
Q Consensus 960 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 1039 (1560)
....+ ...+.. +
T Consensus 257 ----~~~~~----------~~~~~~------------------------------------~------------------ 268 (530)
T PRK15064 257 ----KKKAQ----------IAELQS------------------------------------F------------------ 268 (530)
T ss_pred ----HHHHH----------HHHHHH------------------------------------H------------------
Confidence 00000 000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 000406 1040 LVGLGFGCIIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLM 1119 (1560)
Q Consensus 1040 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~ 1119 (1560)
..+ . .. .. ....
T Consensus 269 ----------------------------------~~~---~-----~~--~~---------~~~~--------------- 280 (530)
T PRK15064 269 ----------------------------------VSR---F-----SA--NA---------SKAK--------------- 280 (530)
T ss_pred ----------------------------------HHH---h-----hc--cc---------hhhH---------------
Confidence 000 0 00 00 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHH
Q 000406 1120 GLSSAAVGLGVSLVLNWRLTLVAAALTPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINS 1199 (1560)
Q Consensus 1120 ~~~~~i~~l~~~~~~~~~l~lv~l~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~ 1199 (1560)
.. ....++
T Consensus 281 ------------------------------------------------~~------------------------~~~~~~ 288 (530)
T PRK15064 281 ------------------------------------------------QA------------------------TSRAKQ 288 (530)
T ss_pred ------------------------------------------------HH------------------------HHHHHH
Confidence 00 000000
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 000406 1200 FDKALSEPKKKSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTS 1279 (1560)
Q Consensus 1200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~ 1279 (1560)
+.+.
T Consensus 289 ~~~~---------------------------------------------------------------------------- 292 (530)
T PRK15064 289 IDKI---------------------------------------------------------------------------- 292 (530)
T ss_pred Hhhc----------------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHHHHHHHHhccCCccccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHH
Q 000406 1280 MAATAIPAVLQITKRKPLIDNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVI 1359 (1560)
Q Consensus 1280 ~~~~s~~ri~~i~~~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl 1359 (1560)
+..........................|+++||+++|++ .++|+|+||+|++||++||+||||||||||+
T Consensus 293 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl 362 (530)
T PRK15064 293 -------KLEEVKPSSRQNPFIRFEQDKKLHRNALEVENLTKGFDN---GPLFKNLNLLLEAGERLAIIGENGVGKTTLL 362 (530)
T ss_pred -------cccccCCccccCceeeCCCCCCCCCceEEEEeeEEeeCC---ceeecCcEEEECCCCEEEEECCCCCCHHHHH
Confidence 000000000000000000000011235999999999963 3599999999999999999999999999999
Q ss_pred HHHhcccCCCccEEEECCEecCCCCHHHHhhceEEEcCCCC--CCC-ccHHHHHhcCC-CCCCHHHHHHHHHHHhHH-HH
Q 000406 1360 WLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEPA--LFA-GTIRDNIALGN-PKASWAEIEEAAEEAYIH-KF 1434 (1560)
Q Consensus 1360 ~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~--LF~-gTIreNL~~g~-~~~sd~eI~~al~~a~l~-~~ 1434 (1560)
++|+|+++|++|+|.++|. +.++|+||++. ++. .|+++|+.... +...++++.++++..++. +.
T Consensus 363 ~~i~G~~~p~~G~i~~~~~-----------~~i~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 431 (530)
T PRK15064 363 RTLVGELEPDSGTVKWSEN-----------ANIGYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDD 431 (530)
T ss_pred HHHhCCCCCCCeEEEECCc-----------eEEEEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhH
Confidence 9999999999999999972 57999999974 443 69999997532 222344566666665542 22
Q ss_pred HHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHH
Q 000406 1435 ISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTI 1514 (1560)
Q Consensus 1435 I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti 1514 (1560)
.......||||||||++|||||+.+|+||||||||++||+.+...+.+.|++. ++|||+|||+++.+
T Consensus 432 -----------~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~ 498 (530)
T PRK15064 432 -----------IKKSVKVLSGGEKGRMLFGKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFV 498 (530)
T ss_pred -----------hcCcccccCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHH
Confidence 22334579999999999999999999999999999999999999999999986 46999999999998
Q ss_pred hh-cCEEEEEeCCEEE-EecCHHHHHh
Q 000406 1515 RE-ANMIAVVRDGAVV-EYGSHETLLA 1539 (1560)
Q Consensus 1515 ~~-aDrIlVLd~G~Iv-E~Gt~~eLl~ 1539 (1560)
.. ||+|++|++|+++ ..|+++++++
T Consensus 499 ~~~~d~i~~l~~g~i~~~~g~~~~~~~ 525 (530)
T PRK15064 499 SSLATRIIEITPDGVVDFSGTYEEYLR 525 (530)
T ss_pred HHhCCEEEEEECCeEEEcCCCHHHHHH
Confidence 76 9999999999998 7799999886
No 88
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=2.7e-65 Score=592.60 Aligned_cols=534 Identities=24% Similarity=0.336 Sum_probs=454.0
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 348 LLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLEITCWRLVGERSAQRI 427 (1560)
Q Consensus 348 ~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l 427 (1560)
.++++.+++ .++....++++-++-|.+....+-. .+.....+.+++.++..++-+++.....+++.++-.++
T Consensus 27 ~v~lfS~~I-NiL~L~~~lyMLQVyDRVL~S~s~~-------TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L 98 (580)
T COG4618 27 GVGLFSAVI-NLLALTGPLYMLQVYDRVLPSRSVP-------TLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQL 98 (580)
T ss_pred HHHHHHHHH-HHHHHhhhHHHHHHHhhhccCCCcc-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344443433 3446666777778888877543211 12223333344445555666778888888999999999
Q ss_pred HHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 428 RTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLRSWKVSLVVLSVTPLMM 507 (1560)
Q Consensus 428 r~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~s~~l~lv~l~~~pl~~ 507 (1560)
...+|++.++.++.--. .|+=.+-+ +|.++++.+++..-...+.+.-.+.+.++++|.+++++.++.++...+++
T Consensus 99 ~~~v~~a~~~~~l~~~~----~g~~~Q~L-rDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv 173 (580)
T COG4618 99 NGPVFAASFSAPLLRRG----SGDGLQPL-RDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILV 173 (580)
T ss_pred ccHHHHHHHhhHHhhcC----CCccccch-hhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888776542 23222323 79999999999877777777777777888999999999998888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhHHHHHHHHHHHHHHHHH
Q 000406 508 FCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKLGFAKGAGMGVIYLVT 587 (1560)
Q Consensus 508 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~ 587 (1560)
.+..+-.+..++-.++..+...+.+.+..-+..|.++|+++|+.....++|.+....+.....+..-..+....+.-.+-
T Consensus 174 ~la~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~R 253 (580)
T COG4618 174 VLALLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALR 253 (580)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 66666666566666666667777888899999999999999999999999999999888888887777777788888888
Q ss_pred HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcCC
Q 000406 588 YATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIIDRVPEIDPYNSEGRKLS 667 (1560)
Q Consensus 588 ~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~~~~~~~~~~~~~~~~~ 667 (1560)
.++...++.+|++++++|++|+|.+++....+...-.|+...+..|.++..+..|.+|+.+++...|+.. ..-..|
T Consensus 254 m~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~----~~m~LP 329 (580)
T COG4618 254 MALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAA----ERMPLP 329 (580)
T ss_pred HHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccc----CCCCCC
Confidence 8888889999999999999999999998777766667888999999999999999999999998766532 223456
Q ss_pred CCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHH
Q 000406 668 SVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWL 747 (1560)
Q Consensus 668 ~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~l 747 (1560)
.++|.+.++++++.-|+. ++++|++|||++++||.++||||||||||||.++|.|.++|++|.|.+||-|+++++.+.+
T Consensus 330 ~P~g~L~Ve~l~~~PPg~-~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~l 408 (580)
T COG4618 330 APQGALSVERLTAAPPGQ-KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQL 408 (580)
T ss_pred CCCceeeEeeeeecCCCC-CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHh
Confidence 678999999999987654 5789999999999999999999999999999999999999999999999999999999999
Q ss_pred hccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhc
Q 000406 748 RTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMI 827 (1560)
Q Consensus 748 r~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~ 827 (1560)
-++|||.||+..||+|||+|||+-..++.+.+.+.+|++.+++||.|..+|+||||.+|+.|..|||||||||+||||||
T Consensus 409 G~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlY 488 (580)
T COG4618 409 GRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALY 488 (580)
T ss_pred ccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHc
Confidence 99999999999999999999998877778889999999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhh
Q 000406 828 KDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 828 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
.+|.+++||||-|+||.+.|..+.++|...+ +|.|+|+||||++.+..+|+|+||++|++...|+-+|++++
T Consensus 489 G~P~lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 489 GDPFLVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred CCCcEEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 9999999999999999999999999998874 69999999999999999999999999999999999998763
No 89
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.3e-64 Score=638.71 Aligned_cols=482 Identities=23% Similarity=0.329 Sum_probs=337.0
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|+. +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++. .+|
T Consensus 6 ~l~i~~l~~~y~~--~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~-----------~~i 72 (556)
T PRK11819 6 IYTMNRVSKVVPP--KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPG-----------IKV 72 (556)
T ss_pred EEEEeeEEEEeCC--CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEE
Confidence 5899999999962 246999999999999999999999999999999999999999999999751 469
Q ss_pred EEEecCCcCccc-cHHHHHhcCCCCC----------------C----------HHHHHHHHH-------HhhhHHHHHhC
Q 000406 752 GMVGQEPILFAT-SILENVLMGKENA----------------T----------MKEAVAACK-------AASAHSFISEL 797 (1560)
Q Consensus 752 ~~v~Q~~~lf~~-Tv~eNi~~g~~~~----------------~----------~~~~~~~~~-------~~~~~~~i~~l 797 (1560)
+||+|+|.+++. |++||+.++.... . ..++.+.+. ...+.+.+..+
T Consensus 73 ~~v~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 152 (556)
T PRK11819 73 GYLPQEPQLDPEKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDAL 152 (556)
T ss_pred EEEecCCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhC
Confidence 999999999876 9999998753100 0 000111111 11223344444
Q ss_pred CCCCCcccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-C
Q 000406 798 PLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-A 876 (1560)
Q Consensus 798 ~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~ 876 (1560)
|++ .......+|||||||||+|||||+.+|++|||||||++||+.+...+.+.|+++. .|+|+|||+++.+.. |
T Consensus 153 --gl~-~~~~~~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~~~L~~~~--~tviiisHd~~~~~~~~ 227 (556)
T PRK11819 153 --RCP-PWDAKVTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLEQFLHDYP--GTVVAVTHDRYFLDNVA 227 (556)
T ss_pred --CCC-cccCchhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHHHHHHhCC--CeEEEEeCCHHHHHhhc
Confidence 443 2466678999999999999999999999999999999999999999999998874 599999999999976 9
Q ss_pred CEEEEEeCCeEE-EecChhhHhhhcchHHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhh
Q 000406 877 NTIVVLDQGSVV-EIGNHRQLLERGGAYHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYF 955 (1560)
Q Consensus 877 D~i~vl~~G~iv-~~G~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1560)
|+|++|++|+++ ..|+++++.+.... .. ... . .
T Consensus 228 d~i~~l~~g~i~~~~g~~~~~~~~~~~--~~-~~~-------------~-----------------~------------- 261 (556)
T PRK11819 228 GWILELDRGRGIPWEGNYSSWLEQKAK--RL-AQE-------------E-----------------K------------- 261 (556)
T ss_pred CeEEEEeCCEEEEecCCHHHHHHHHHH--HH-HHH-------------H-----------------H-------------
Confidence 999999999986 67887765432100 00 000 0 0
Q ss_pred hhhHHHhhhhHhhhhCCCCchhhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHH
Q 000406 956 KSMQAEIQTVEEEQQKPRPRKFQLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRY 1035 (1560)
Q Consensus 956 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1035 (1560)
..+..+. ....... +.
T Consensus 262 --------~~~~~~~-------~~~~~~~------------------------------------~~------------- 277 (556)
T PRK11819 262 --------QEAARQK-------ALKRELE------------------------------------WV------------- 277 (556)
T ss_pred --------HHHHHHH-------HHHHHHH------------------------------------HH-------------
Confidence 0000000 0000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHH
Q 000406 1036 LSLALVGLGFGCIIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFS 1115 (1560)
Q Consensus 1036 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~ 1115 (1560)
. +.+.+ +
T Consensus 278 --------------------------------------------------~--~~~~~----~----------------- 284 (556)
T PRK11819 278 --------------------------------------------------R--QSPKA----R----------------- 284 (556)
T ss_pred --------------------------------------------------H--Hhhhh----h-----------------
Confidence 0 00000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHH
Q 000406 1116 VLLMGLSSAAVGLGVSLVLNWRLTLVAAALTPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQ 1195 (1560)
Q Consensus 1116 ~~l~~~~~~i~~l~~~~~~~~~l~lv~l~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~ 1195 (1560)
. .+. ..
T Consensus 285 ---------------------------------------------~-~~~----------------------------~~ 290 (556)
T PRK11819 285 ---------------------------------------------Q-AKS----------------------------KA 290 (556)
T ss_pred ---------------------------------------------H-HHH----------------------------HH
Confidence 0 000 00
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhH
Q 000406 1196 IINSFDKALSEPKKKSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLA 1275 (1560)
Q Consensus 1196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~ 1275 (1560)
..+++
T Consensus 291 ~~~~~--------------------------------------------------------------------------- 295 (556)
T PRK11819 291 RLARY--------------------------------------------------------------------------- 295 (556)
T ss_pred HHHHH---------------------------------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHh-ccCCccccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCC
Q 000406 1276 PDTSMAATAIPAVLQIT-KRKPLIDNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSG 1354 (1560)
Q Consensus 1276 ~~~~~~~~s~~ri~~i~-~~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSG 1354 (1560)
++..+.. ...+..........+.....-|+++||+++|++ .++|+||||+|++||++||+|+||||
T Consensus 296 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~NGsG 362 (556)
T PRK11819 296 ----------EELLSEEYQKRNETNEIFIPPGPRLGDKVIEAENLSKSFGD---RLLIDDLSFSLPPGGIVGIIGPNGAG 362 (556)
T ss_pred ----------HHhhcccccccCCCceeecCCCCCCCCeEEEEEeEEEEECC---eeeecceeEEEcCCCEEEEECCCCCC
Confidence 0000000 000000000000000111235999999999963 35999999999999999999999999
Q ss_pred HHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceEEEcCCC-CCCC-ccHHHHHhcCCCC----CCHHHHHHHHHH
Q 000406 1355 KSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEP-ALFA-GTIRDNIALGNPK----ASWAEIEEAAEE 1428 (1560)
Q Consensus 1355 KSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp-~LF~-gTIreNL~~g~~~----~sd~eI~~al~~ 1428 (1560)
||||+++|+|+++|++|+|.+++ ++ .|+|+||++ .++. .|++||+.++... ..+.+..++++.
T Consensus 363 KSTLl~~i~G~~~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~ 431 (556)
T PRK11819 363 KSTLFKMITGQEQPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGR 431 (556)
T ss_pred HHHHHHHHhCCCCCCCeEEEECC-ce----------EEEEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHh
Confidence 99999999999999999999964 21 599999997 5654 5999999875311 112222333333
Q ss_pred HhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEe
Q 000406 1429 AYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVA 1508 (1560)
Q Consensus 1429 a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IA 1508 (1560)
.++. . .........||||||||++|||||+.+|+||||||||++||+.+...+.+.|++. . .|+|+||
T Consensus 432 ~~l~-------~---~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vt 499 (556)
T PRK11819 432 FNFK-------G---GDQQKKVGVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVIS 499 (556)
T ss_pred CCCC-------h---hHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEE
Confidence 2221 0 1123334579999999999999999999999999999999999999999999986 3 4899999
Q ss_pred cChHHHhh-cCEEEEEeC-CEEEE-ecCHHHHHh
Q 000406 1509 HRLSTIRE-ANMIAVVRD-GAVVE-YGSHETLLA 1539 (1560)
Q Consensus 1509 HRlsti~~-aDrIlVLd~-G~IvE-~Gt~~eLl~ 1539 (1560)
|+++.+.. ||+|++|++ |++.+ .|+++++++
T Consensus 500 Hd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~ 533 (556)
T PRK11819 500 HDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEE 533 (556)
T ss_pred CCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHH
Confidence 99999876 999999996 88875 588888876
No 90
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=8.8e-64 Score=635.85 Aligned_cols=481 Identities=24% Similarity=0.345 Sum_probs=335.8
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|+. ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.+++ +.+|
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 70 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAP-----------GIKV 70 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecC-----------CCEE
Confidence 4899999999962 24699999999999999999999999999999999999999999999975 2469
Q ss_pred EEEecCCcCccc-cHHHHHhcCCCC-----------------CCH---------HHHHHHHHHhh-------hHHHHHhC
Q 000406 752 GMVGQEPILFAT-SILENVLMGKEN-----------------ATM---------KEAVAACKAAS-------AHSFISEL 797 (1560)
Q Consensus 752 ~~v~Q~~~lf~~-Tv~eNi~~g~~~-----------------~~~---------~~~~~~~~~~~-------~~~~i~~l 797 (1560)
+||+|+|.+++. |++|||.++... ... .++.++++..+ +.+.+..+
T Consensus 71 ~~v~Q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 150 (552)
T TIGR03719 71 GYLPQEPQLDPTKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL 150 (552)
T ss_pred EEEeccCCCCCCCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC
Confidence 999999998865 999999875311 000 11122222221 22334443
Q ss_pred CCCCCcccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-C
Q 000406 798 PLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-A 876 (1560)
Q Consensus 798 ~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~ 876 (1560)
|++. .+....+||||||||++|||||+.+|++|||||||++||+.+...+.+.|++. +.|+|+|||+++.+.. |
T Consensus 151 --~l~~-~~~~~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~~L~~~--~~tvIiisHd~~~~~~~~ 225 (552)
T TIGR03719 151 --RCPP-WDADVTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQHLQEY--PGTVVAVTHDRYFLDNVA 225 (552)
T ss_pred --CCCc-ccCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhc
Confidence 4422 35667899999999999999999999999999999999999999999999876 3699999999999976 9
Q ss_pred CEEEEEeCCeEE-EecChhhHhhhcchHHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhh
Q 000406 877 NTIVVLDQGSVV-EIGNHRQLLERGGAYHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYF 955 (1560)
Q Consensus 877 D~i~vl~~G~iv-~~G~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1560)
|+|++|++|+++ ..|+++++++... ...... . .. ..+
T Consensus 226 d~v~~l~~g~i~~~~g~~~~~~~~~~---~~~~~~-------------~-----------------~~-------~~~-- 263 (552)
T TIGR03719 226 GWILELDRGRGIPWEGNYSSWLEQKE---KRLEQE-------------E-----------------KE-------ESA-- 263 (552)
T ss_pred CeEEEEECCEEEEecCCHHHHHHHHH---HHHHHH-------------H-----------------HH-------HHH--
Confidence 999999999976 6688777653110 000000 0 00 000
Q ss_pred hhhHHHhhhhHhhhhCCCCchhhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHH
Q 000406 956 KSMQAEIQTVEEEQQKPRPRKFQLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRY 1035 (1560)
Q Consensus 956 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1035 (1560)
. +.+ ...... +
T Consensus 264 --~-------~~~----------~~~~~~------------------------------------~-------------- 274 (552)
T TIGR03719 264 --R-------QKA----------LKRELE------------------------------------W-------------- 274 (552)
T ss_pred --H-------HHH----------HHHHHH------------------------------------H--------------
Confidence 0 000 000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHH
Q 000406 1036 LSLALVGLGFGCIIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFS 1115 (1560)
Q Consensus 1036 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~ 1115 (1560)
++. . +.+. +
T Consensus 275 ---------------------------------~~~--------~----------~~~~---~----------------- 283 (552)
T TIGR03719 275 ---------------------------------VRS--------S----------PKAR---Q----------------- 283 (552)
T ss_pred ---------------------------------HHh--------h----------hhhH---H-----------------
Confidence 000 0 0000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHH
Q 000406 1116 VLLMGLSSAAVGLGVSLVLNWRLTLVAAALTPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQ 1195 (1560)
Q Consensus 1116 ~~l~~~~~~i~~l~~~~~~~~~l~lv~l~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~ 1195 (1560)
. .. ..
T Consensus 284 -----------------------------------------------------~--~~--------------------~~ 288 (552)
T TIGR03719 284 -----------------------------------------------------A--KS--------------------KA 288 (552)
T ss_pred -----------------------------------------------------H--HH--------------------HH
Confidence 0 00 00
Q ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhH
Q 000406 1196 IINSFDKALSEPKKKSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLA 1275 (1560)
Q Consensus 1196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~ 1275 (1560)
...++
T Consensus 289 ~~~~~--------------------------------------------------------------------------- 293 (552)
T TIGR03719 289 RLARY--------------------------------------------------------------------------- 293 (552)
T ss_pred HHHHH---------------------------------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHH-hccCCccccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCC
Q 000406 1276 PDTSMAATAIPAVLQI-TKRKPLIDNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSG 1354 (1560)
Q Consensus 1276 ~~~~~~~~s~~ri~~i-~~~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSG 1354 (1560)
++..+. ....++...............-++++||+++|+. .++|+||||+|++||++||+|+||||
T Consensus 294 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~NGsG 360 (552)
T TIGR03719 294 ----------EELLSQEFQKRNETAEIYIPPGPRLGDKVIEAENLSKGFGD---KLLIDDLSFKLPPGGIVGVIGPNGAG 360 (552)
T ss_pred ----------HhhhhhcccccCCCceeecCCCCCCCCeEEEEeeEEEEECC---eeeeccceEEEcCCCEEEEECCCCCC
Confidence 000000 0000000000000000011225999999999963 35999999999999999999999999
Q ss_pred HHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceEEEcCCCC-CCC-ccHHHHHhcCCCC--CC--HHHHHHHHHH
Q 000406 1355 KSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEPA-LFA-GTIRDNIALGNPK--AS--WAEIEEAAEE 1428 (1560)
Q Consensus 1355 KSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~-LF~-gTIreNL~~g~~~--~s--d~eI~~al~~ 1428 (1560)
||||+++|+|+++|++|+|.+++ ++ .|+|+||++. ++. .|++||+.++... .. +.+..++++.
T Consensus 361 KSTLl~~l~G~~~p~~G~i~~~~-~~----------~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~ 429 (552)
T TIGR03719 361 KSTLFRMITGQEQPDSGTIKIGE-TV----------KLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGR 429 (552)
T ss_pred HHHHHHHHcCCCCCCCeEEEECC-ce----------EEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHHHHHHh
Confidence 99999999999999999999964 21 6999999973 554 5999999875321 11 1222223332
Q ss_pred HhHHHHHHhCCCCccc-cccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEE
Q 000406 1429 AYIHKFISSLPQGYET-QVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVV 1507 (1560)
Q Consensus 1429 a~l~~~I~~Lp~Gldt-~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~I 1507 (1560)
. |++. ........||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +|||+|
T Consensus 430 ~-----------~l~~~~~~~~~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~viiv 496 (552)
T TIGR03719 430 F-----------NFKGSDQQKKVGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA--GCAVVI 496 (552)
T ss_pred C-----------CCChhHhcCchhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC--CeEEEE
Confidence 2 2321 1233345799999999999999999999999999999999999999999999873 589999
Q ss_pred ecChHHHhh-cCEEEEEeC-CEEEEe-cCHHHHHh
Q 000406 1508 AHRLSTIRE-ANMIAVVRD-GAVVEY-GSHETLLA 1539 (1560)
Q Consensus 1508 AHRlsti~~-aDrIlVLd~-G~IvE~-Gt~~eLl~ 1539 (1560)
||+++.+.. ||+|++|++ |+++++ |+++++.+
T Consensus 497 sHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~ 531 (552)
T TIGR03719 497 SHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEE 531 (552)
T ss_pred eCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHH
Confidence 999999876 999999997 688754 88887765
No 91
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=1.2e-62 Score=625.84 Aligned_cols=527 Identities=18% Similarity=0.191 Sum_probs=390.5
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 983 WKLQRPEFAMIIFGFILGMHAGAILSIF-PLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGWA 1061 (1560)
Q Consensus 983 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 1061 (1560)
+++.++.++.++++++++++..++.... |++...+++... .. .... ..++++.++..++.++..++..++
T Consensus 5 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~----~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 75 (547)
T PRK10522 5 RLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETAD----TS-LLVL----PEFLGLLLLLMAVTLGSQLALTTL 75 (547)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc----cc-chHH----HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455566666666666666555554443 344344443221 10 0001 111222222344566777888889
Q ss_pred HHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1062 GTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTLV 1141 (1560)
Q Consensus 1062 ~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~lv 1141 (1560)
+.++..++|..++++++++|+.||+ ++++|++++|+++|++.+...+. .++.++.+++..+++++++++++|.++++
T Consensus 76 ~~~~~~~lR~~l~~~ll~~~~~~~~--~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~~~~~l~li 152 (547)
T PRK10522 76 GHHFVYRLRSEFIKRILDTHVERIE--QLGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAAYLAWLSPKMLLV 152 (547)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHh--ccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 9999999999999999999999987 78999999999999999998765 47778888888899999999999999999
Q ss_pred HHHHHHHHHHHHHH-HHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccch---HHHHHHHHHHHhhhHHHHHHHHHH
Q 000406 1142 AAALTPFTLGASYL-SLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQ---EQIINSFDKALSEPKKKSVKRSQI 1217 (1560)
Q Consensus 1142 ~l~~ipl~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e---~~~~~~~~~~~~~~~~~~~~~~~~ 1217 (1560)
+++++|+.++..++ ........+..++...+..+.+.|.+.|+++++ ++.+ +.+.+++++..++..+...+....
T Consensus 153 ~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (547)
T PRK10522 153 TAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRHHIIRADTF 231 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHhhhHHHHHH
Confidence 88888877655443 333333333335667788899999999999995 4443 456788888777776665555444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCc
Q 000406 1218 LGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPL 1297 (1560)
Q Consensus 1218 ~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~ 1297 (1560)
......+...+..+...+.++++... ..+ +.+.+..+..+......|+..+...+..+..+..+.+|+.++.+.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~ 308 (547)
T PRK10522 232 HLSAVNWSNIMMLGAIGLVFYMANSL-GWA--DTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYK 308 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh-hcC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 43333333222222222222333222 112 233333333333345578999999999999999999999998754332
Q ss_pred cccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECC
Q 000406 1298 IDNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEG 1377 (1560)
Q Consensus 1298 ~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdG 1377 (1560)
.+.... ...+..+.|+++||+|+|+++ .++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||
T Consensus 309 ~~~~~~--~~~~~~~~i~~~~v~f~y~~~--~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g 384 (547)
T PRK10522 309 AEFPRP--QAFPDWQTLELRNVTFAYQDN--GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDG 384 (547)
T ss_pred cccccc--cccCcCceEEEEEEEEEeCCC--CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC
Confidence 211111 111112469999999999742 4699999999999999999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHH
Q 000406 1378 VDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQ 1457 (1560)
Q Consensus 1378 vdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQ 1457 (1560)
+|+++++.+.+|++++||||||++|++|+++| .+..++++++++++.+++.+++.. ++|. .+|.+|||||
T Consensus 385 ~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n----~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~~G~~LSgGq 454 (547)
T PRK10522 385 KPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE----GKPANPALVEKWLERLKMAHKLEL-EDGR-----ISNLKLSKGQ 454 (547)
T ss_pred EECCCCCHHHHhhheEEEecChhHHHHhhccc----cCchHHHHHHHHHHHcCCchhhhc-cccC-----CCCCCCCHHH
Confidence 99999999999999999999999999999999 245677888888888777665542 3332 1478999999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhhcCEEEEEeCCEEEEe-cCH
Q 000406 1458 KQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIREANMIAVVRDGAVVEY-GSH 1534 (1560)
Q Consensus 1458 rQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~-Gt~ 1534 (1560)
||||+||||++++|+|||||||||+||+++|+.|.+.|.+.. +++|+|+||||++++..||+|++|++|+++|. |++
T Consensus 455 ~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~~~~~ 534 (547)
T PRK10522 455 KKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELTGEE 534 (547)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEecCCc
Confidence 999999999999999999999999999999999999997654 47999999999999999999999999999998 666
Q ss_pred HHHHh
Q 000406 1535 ETLLA 1539 (1560)
Q Consensus 1535 ~eLl~ 1539 (1560)
.+-+.
T Consensus 535 ~~~~~ 539 (547)
T PRK10522 535 RDAAS 539 (547)
T ss_pred hhhhh
Confidence 55443
No 92
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=2.5e-62 Score=666.60 Aligned_cols=214 Identities=21% Similarity=0.337 Sum_probs=176.4
Q ss_pred ccEEEEEEEEEcCCC----------CCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC--CccEEEECCEe
Q 000406 1312 LGIELKMVTFTYPSR----------PEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP--NQGKVMIEGVD 1379 (1560)
Q Consensus 1312 ~~I~~~nVsf~Y~~~----------~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p--~~G~I~IdGvd 1379 (1560)
..+.++||++..+.. ....+|+|||++|+|||.+||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 866 ~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~ 945 (1470)
T PLN03140 866 LAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFP 945 (1470)
T ss_pred ceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCcc
Confidence 369999999997532 123699999999999999999999999999999999999873 68999999988
Q ss_pred cCCCCHHHHhhceEEEcCCCCCCC-ccHHHHHhcCC----C-CCCHHH----HHHHHHHHhHHHHHHhCCCCccccccCC
Q 000406 1380 LREINVKWLRKQTALVGQEPALFA-GTIRDNIALGN----P-KASWAE----IEEAAEEAYIHKFISSLPQGYETQVGES 1449 (1560)
Q Consensus 1380 i~~i~l~~LR~~I~~VpQdp~LF~-gTIreNL~~g~----~-~~sd~e----I~~al~~a~l~~~I~~Lp~Gldt~Vge~ 1449 (1560)
+. ...+|+.++||+|++.++. .||+|||.+.. | ..+.++ +.++++..++.+ -.|+.+|..
T Consensus 946 ~~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~-------~~~~~vg~~ 1015 (1470)
T PLN03140 946 KK---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDN-------LKDAIVGLP 1015 (1470)
T ss_pred CC---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChh-------HhCCccCCC
Confidence 64 3456788999999987776 59999998641 1 223332 445555555433 346777754
Q ss_pred C-CCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHH-H-hhcCEEEEEeC
Q 000406 1450 G-VQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLST-I-REANMIAVVRD 1525 (1560)
Q Consensus 1450 G-~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlst-i-~~aDrIlVLd~ 1525 (1560)
+ ..||||||||++|||||+.+|+||+||||||+||+.+...|.+.|+++. +++|||+++|+++. + ..+|++++|++
T Consensus 1016 ~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~ 1095 (1470)
T PLN03140 1016 GVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKR 1095 (1470)
T ss_pred CCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcC
Confidence 4 5799999999999999999999999999999999999999999999874 46899999999984 4 56999999996
Q ss_pred -CEEEEecCHH
Q 000406 1526 -GAVVEYGSHE 1535 (1560)
Q Consensus 1526 -G~IvE~Gt~~ 1535 (1560)
|+++.+|++.
T Consensus 1096 gG~~v~~G~~~ 1106 (1470)
T PLN03140 1096 GGQVIYSGPLG 1106 (1470)
T ss_pred CCEEEEECCcc
Confidence 8999999863
No 93
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-63 Score=634.86 Aligned_cols=481 Identities=25% Similarity=0.337 Sum_probs=331.3
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++||+++|++ ..+|+||||+|++|+++||+||||||||||+++|+|+++|++|+|.++|. ..|+
T Consensus 2 i~i~nls~~~g~---~~~l~~vs~~i~~Ge~v~LvG~NGsGKSTLLkiL~G~~~pd~G~I~~~~~-----------~~i~ 67 (638)
T PRK10636 2 IVFSSLQIRRGV---RVLLDNATATINPGQKVGLVGKNGCGKSTLLALLKNEISADGGSYTFPGN-----------WQLA 67 (638)
T ss_pred EEEEEEEEEeCC---ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCC-----------CEEE
Confidence 789999999964 45999999999999999999999999999999999999999999999884 2489
Q ss_pred EEecCCcCccccHHHHHhcCCCCC---C-----------HHHH---HHHH-------HHhhhHHHHHhCCCCCC-cccCC
Q 000406 753 MVGQEPILFATSILENVLMGKENA---T-----------MKEA---VAAC-------KAASAHSFISELPLGYD-TQVGD 807 (1560)
Q Consensus 753 ~v~Q~~~lf~~Tv~eNi~~g~~~~---~-----------~~~~---~~~~-------~~~~~~~~i~~l~~gl~-t~~~~ 807 (1560)
|++|++..+..|+.+.+.-+.... + .... .... ....+.+.+..+ |+. .....
T Consensus 68 ~~~q~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l--gl~~~~~~~ 145 (638)
T PRK10636 68 WVNQETPALPQPALEYVIDGDREYRQLEAQLHDANERNDGHAIATIHGKLDAIDAWTIRSRAASLLHGL--GFSNEQLER 145 (638)
T ss_pred EEecCCCCCCCCHHHHHHHhhHHHHHHHHHHHHHhccCCHHHHHHHHHHHHhcCCcchHHHHHHHHHhC--CCCchhhcC
Confidence 999976545556666554221000 0 0000 0000 011233445554 553 34566
Q ss_pred CCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCe
Q 000406 808 RGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGS 886 (1560)
Q Consensus 808 ~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~ 886 (1560)
...+|||||||||+|||||+.+|+||||||||++||+.+..++.+.|++. +.|||+|||+++++.. ||+|++|++|+
T Consensus 146 ~~~~LSgGerqRv~LA~aL~~~P~lLLLDEPtn~LD~~~~~~L~~~L~~~--~~tviivsHd~~~l~~~~d~i~~L~~G~ 223 (638)
T PRK10636 146 PVSDFSGGWRMRLNLAQALICRSDLLLLDEPTNHLDLDAVIWLEKWLKSY--QGTLILISHDRDFLDPIVDKIIHIEQQS 223 (638)
T ss_pred chhhcCHHHHHHHHHHHHHccCCCEEEEcCCCCcCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHHhcCEEEEEeCCE
Confidence 77899999999999999999999999999999999999999999999876 4799999999999976 99999999999
Q ss_pred EEE-ecChhhHhhhcchHHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhh
Q 000406 887 VVE-IGNHRQLLERGGAYHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQTV 965 (1560)
Q Consensus 887 iv~-~G~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 965 (1560)
++. .|+++........ ....+. ..+ .....+
T Consensus 224 i~~~~g~~~~~~~~~~~---~~~~~~----------------------------------------~~~-~~~~~~---- 255 (638)
T PRK10636 224 LFEYTGNYSSFEVQRAT---RLAQQQ----------------------------------------AMY-ESQQER---- 255 (638)
T ss_pred EEEecCCHHHHHHHHHH---HHHHHH----------------------------------------HHH-HHHHHH----
Confidence 964 5666654321000 000000 000 000000
Q ss_pred HhhhhCCCCchhhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHH
Q 000406 966 EEEQQKPRPRKFQLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGF 1045 (1560)
Q Consensus 966 ~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 1045 (1560)
+..... +
T Consensus 256 -------------~~~~~~------------------------------------~------------------------ 262 (638)
T PRK10636 256 -------------VAHLQS------------------------------------Y------------------------ 262 (638)
T ss_pred -------------HHHHHH------------------------------------H------------------------
Confidence 000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1046 GCIIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAA 1125 (1560)
Q Consensus 1046 ~~~~~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i 1125 (1560)
+.|+.
T Consensus 263 --------------------------------------------------i~r~~------------------------- 267 (638)
T PRK10636 263 --------------------------------------------------IDRFR------------------------- 267 (638)
T ss_pred --------------------------------------------------HHHhh-------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHh
Q 000406 1126 VGLGVSLVLNWRLTLVAAALTPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALS 1205 (1560)
Q Consensus 1126 ~~l~~~~~~~~~l~lv~l~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~ 1205 (1560)
.. .+..... + ...+
T Consensus 268 ----------------------------------~~-a~~~~~a-----------------------~-~r~~------- 281 (638)
T PRK10636 268 ----------------------------------AK-ATKAKQA-----------------------Q-SRIK------- 281 (638)
T ss_pred ----------------------------------hh-hhhHHHH-----------------------H-HHHH-------
Confidence 00 0000000 0 0000
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Q 000406 1206 EPKKKSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAI 1285 (1560)
Q Consensus 1206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~ 1285 (1560)
.+
T Consensus 282 ------------------------------------------------------------------------------~l 283 (638)
T PRK10636 282 ------------------------------------------------------------------------------ML 283 (638)
T ss_pred ------------------------------------------------------------------------------HH
Confidence 00
Q ss_pred HHHHHHhccCCccccc---cccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHH
Q 000406 1286 PAVLQITKRKPLIDNV---KGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLI 1362 (1560)
Q Consensus 1286 ~ri~~i~~~~~~~~~~---~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL 1362 (1560)
+++... + ++..... .-+.........|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|
T Consensus 284 ~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~y~~---~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l 358 (638)
T PRK10636 284 ERMELI-A-PAHVDNPFHFSFRAPESLPNPLLKMEKVSAGYGD---RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLL 358 (638)
T ss_pred HHhhcc-c-ccccCCceeEecCCCccCCCceEEEEeeEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHH
Confidence 010000 0 0000000 000001111235999999999963 4599999999999999999999999999999999
Q ss_pred hcccCCCccEEEECCEecCCCCHHHHhhceEEEcCCC--CCCC-ccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCC
Q 000406 1363 QRFYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEP--ALFA-GTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLP 1439 (1560)
Q Consensus 1363 ~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp--~LF~-gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp 1439 (1560)
+|+++|++|+|.+++. .+++|+||++ .+.. .|+.+++....+....+++.+.++..++..
T Consensus 359 ~G~~~p~~G~i~~~~~-----------~~igy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~------ 421 (638)
T PRK10636 359 AGELAPVSGEIGLAKG-----------IKLGYFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQG------ 421 (638)
T ss_pred hCCCCCCCCeEEECCC-----------EEEEEecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCCh------
Confidence 9999999999999741 2699999985 3443 488888742222223344555554444321
Q ss_pred CCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cC
Q 000406 1440 QGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-AN 1518 (1560)
Q Consensus 1440 ~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aD 1518 (1560)
.-.+.+ ...||||||||++|||||+.+|+||||||||++||+.+...+.+.|++. ++|||+|||++..+.. ||
T Consensus 422 ~~~~~~----~~~LSgGekqRl~La~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~gtvi~vSHd~~~~~~~~d 495 (638)
T PRK10636 422 DKVTEE----TRRFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--EGALVVVSHDRHLLRSTTD 495 (638)
T ss_pred hHhcCc----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHhCC
Confidence 012233 3479999999999999999999999999999999999999999999986 4599999999999976 99
Q ss_pred EEEEEeCCEEE-EecCHHHHHh
Q 000406 1519 MIAVVRDGAVV-EYGSHETLLA 1539 (1560)
Q Consensus 1519 rIlVLd~G~Iv-E~Gt~~eLl~ 1539 (1560)
+|++|++|+|+ ..|++++..+
T Consensus 496 ~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 496 DLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred EEEEEECCEEEEcCCCHHHHHH
Confidence 99999999998 5699988753
No 94
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.7e-61 Score=613.37 Aligned_cols=524 Identities=16% Similarity=0.160 Sum_probs=386.2
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHhHHHH-HHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 337 KYSTKLDMILVLLGCIGALINGGALPW-YSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLEITC 415 (1560)
Q Consensus 337 ~y~~~~~~~~~~l~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~ 415 (1560)
+|+++. ++.++++++++++..++... .+++.+.++|.... .. ... ..++++.++.+++.++..++
T Consensus 6 ~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~---~~------~~~----~~~~~~~~~~~~~~~~~~~~ 71 (547)
T PRK10522 6 LVWRQY-RWPFISVMALSLASAALGIGLIAFINQRLIETADT---SL------LVL----PEFLGLLLLLMAVTLGSQLA 71 (547)
T ss_pred HHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---cc------hHH----HHHHHHHHHHHHHHHHHHHH
Confidence 344433 33445555555555555544 34555666664321 00 011 11122222334456677778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 416 WRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLRSWKV 495 (1560)
Q Consensus 416 ~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~s~~l 495 (1560)
..+++.++..++|.+++++++++|+.+|+.. ++|++++|+++|++.+...+. .+..++..++.+++.+++++.++|.+
T Consensus 72 ~~~~~~~~~~~lR~~l~~~ll~~~~~~~~~~-~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~~~~~l 149 (547)
T PRK10522 72 LTTLGHHFVYRLRSEFIKRILDTHVERIEQL-GSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAAYLAWLSPKM 149 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHhcc-CccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 8889999999999999999999999999765 899999999999999998765 46778888888898999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcch---HHHHHHHHHHHHhHhHHHhHH
Q 000406 496 SLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAE---DHFAVRYAGLLADSIPFGAKL 572 (1560)
Q Consensus 496 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e---~~~~~~~~~~~~~~~~~~~k~ 572 (1560)
++++++++|+++++..++.++..+..++..+..++..+.+.|.++|+++++ ++.+ +.+.+++.+..++..+...+.
T Consensus 150 ~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (547)
T PRK10522 150 LLVTAIWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRHHIIRA 228 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHhhhHHH
Confidence 999999999988888888888887777778888899999999999999996 4433 456777877776665554444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 000406 573 GFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIIDR 652 (1560)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~~ 652 (1560)
.........+..++..+..++.++++..+. .+ +.+.+.++.++......++..+...+..+..+..+.+|+.++++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~ 305 (547)
T PRK10522 229 DTFHLSAVNWSNIMMLGAIGLVFYMANSLG-WA--DTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALA 305 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 433333222222222222222223332221 12 222333333333334568888889999999999999999998764
Q ss_pred CCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEE
Q 000406 653 VPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLI 732 (1560)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I 732 (1560)
+++.+. + .. ...+..+.|+++||+|+|+++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|
T Consensus 306 ~~~~~~-~-~~-~~~~~~~~i~~~~v~f~y~~~--~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i 380 (547)
T PRK10522 306 PYKAEF-P-RP-QAFPDWQTLELRNVTFAYQDN--GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEI 380 (547)
T ss_pred cccccc-c-cc-cccCcCceEEEEEEEEEeCCC--CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEE
Confidence 322111 1 11 111123579999999999742 468999999999999999999999999999999999999999999
Q ss_pred EECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCC
Q 000406 733 TLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQL 812 (1560)
Q Consensus 733 ~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~L 812 (1560)
.+||+++++++...+|++|+||+|+|.+|++|+++| + +..+++++.++++..++.+++.. ++|. .+|.+|
T Consensus 381 ~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~~G~~L 450 (547)
T PRK10522 381 LLDGKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKLEL-EDGR-----ISNLKL 450 (547)
T ss_pred EECCEECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhhhc-cccC-----CCCCCC
Confidence 999999999999999999999999999999999999 2 23345555555544444333321 2221 137899
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCccccccCCEEEEEeCCeEEEe
Q 000406 813 SGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKNANTIVVLDQGSVVEI 890 (1560)
Q Consensus 813 SgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~ 890 (1560)
|||||||++||||++++|+|||||||||+||+++++.+.+.+.+.. +++|+|+||||++.+..||+|++|++|+++|.
T Consensus 451 SgGq~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~ 530 (547)
T PRK10522 451 SKGQKKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 530 (547)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999887553 48999999999999999999999999999986
Q ss_pred -cChhh
Q 000406 891 -GNHRQ 895 (1560)
Q Consensus 891 -G~~~~ 895 (1560)
|+..+
T Consensus 531 ~~~~~~ 536 (547)
T PRK10522 531 TGEERD 536 (547)
T ss_pred cCCchh
Confidence 44333
No 95
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=2.3e-61 Score=621.60 Aligned_cols=201 Identities=27% Similarity=0.444 Sum_probs=164.6
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+ |.++ .|
T Consensus 319 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i 384 (635)
T PRK11147 319 VFEMENVNYQIDG---KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EV 384 (635)
T ss_pred eEEEeeeEEEECC---eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EE
Confidence 4999999999963 35999999999999999999999999999999999999999999999 4332 59
Q ss_pred EEEcCCC-CCCC-ccHHHHHhcCCCCC--C--HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000406 1393 ALVGQEP-ALFA-GTIRDNIALGNPKA--S--WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARA 1466 (1560)
Q Consensus 1393 ~~VpQdp-~LF~-gTIreNL~~g~~~~--s--d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARA 1466 (1560)
+|++|++ .++. .|+.+|+.++.+.. . ..++.+.++..++. ++..+.++ ..||||||||++||||
T Consensus 385 ~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~------~~~~~~~~----~~LSgGekqRl~la~a 454 (635)
T PRK11147 385 AYFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFH------PKRAMTPV----KALSGGERNRLLLARL 454 (635)
T ss_pred EEEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCC------HHHHhChh----hhCCHHHHHHHHHHHH
Confidence 9999986 4555 49999998753221 1 22233333332221 11123344 4699999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEe-CCEEEEe-cCHHHHHh
Q 000406 1467 ILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVR-DGAVVEY-GSHETLLA 1539 (1560)
Q Consensus 1467 LLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd-~G~IvE~-Gt~~eLl~ 1539 (1560)
|+.+|+||||||||++||+.+...+.+.|++. ++|||+|||+++.+.. ||+|++|+ +|+|+++ |++++.++
T Consensus 455 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 455 FLKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 99999999999999999999999999999876 5699999999999875 99999998 8999886 88888754
No 96
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.2e-62 Score=583.62 Aligned_cols=452 Identities=25% Similarity=0.415 Sum_probs=359.2
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccH-HHHhcc
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQV-KWLRTQ 750 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~-~~lr~~ 750 (1560)
-++++|++++|+. .++|+||||++.+||++||+|+||+|||||+|+|+|.|+|++|+|.+||+++.-.++ +.....
T Consensus 8 ll~~~~i~K~Fgg---V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~G 84 (500)
T COG1129 8 LLELRGISKSFGG---VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAG 84 (500)
T ss_pred eeeeecceEEcCC---ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCC
Confidence 4889999999974 579999999999999999999999999999999999999999999999999986655 456678
Q ss_pred EEEEecCCcCccc-cHHHHHhcCCCCCC------HHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHH
Q 000406 751 IGMVGQEPILFAT-SILENVLMGKENAT------MKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALA 823 (1560)
Q Consensus 751 i~~v~Q~~~lf~~-Tv~eNi~~g~~~~~------~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialA 823 (1560)
|+.|+||..|++. ||.|||.+|.+... ..+..+.+ .+.+..+ |++........+||+||||.|+||
T Consensus 85 I~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A-----~~~l~~l--g~~~~~~~~v~~LsiaqrQ~VeIA 157 (500)
T COG1129 85 IATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRA-----RELLARL--GLDIDPDTLVGDLSIAQRQMVEIA 157 (500)
T ss_pred cEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHHHH-----HHHHHHc--CCCCChhhhhhhCCHHHHHHHHHH
Confidence 9999999999986 99999999876432 23333222 2334544 222225556678999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecCh-hhHhhhc
Q 000406 824 RAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNH-RQLLERG 900 (1560)
Q Consensus 824 RAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~-~~l~~~~ 900 (1560)
|||..+++|||||||||+|+....+.+++.++++. +|.++|+||||++++.. ||||.||+||+.+..++. .++-..
T Consensus 158 rAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~~~- 236 (500)
T COG1129 158 RALSFDARVLILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETSED- 236 (500)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCCHH-
Confidence 99999999999999999999999999999999985 69999999999999977 999999999999875441 111000
Q ss_pred chHHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhhHhhhhCCCCchhhHH
Q 000406 901 GAYHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQTVEEEQQKPRPRKFQLS 980 (1560)
Q Consensus 901 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 980 (1560)
+
T Consensus 237 ----~--------------------------------------------------------------------------- 237 (500)
T COG1129 237 ----E--------------------------------------------------------------------------- 237 (500)
T ss_pred ----H---------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 981 EIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGW 1060 (1560)
Q Consensus 981 ~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 1060 (1560)
+.+ ...
T Consensus 238 -lv~-----------------------------------~Mv-------------------------------------- 243 (500)
T COG1129 238 -LVR-----------------------------------LMV-------------------------------------- 243 (500)
T ss_pred -HHH-----------------------------------Hhh--------------------------------------
Confidence 000 000
Q ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1061 AGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTL 1140 (1560)
Q Consensus 1061 ~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~l 1140 (1560)
|+ +
T Consensus 244 --------------------------------Gr-------~-------------------------------------- 246 (500)
T COG1129 244 --------------------------------GR-------E-------------------------------------- 246 (500)
T ss_pred --------------------------------Cc-------c--------------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 000406 1141 VAAALTPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILGL 1220 (1560)
Q Consensus 1141 v~l~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1220 (1560)
T Consensus 247 -------------------------------------------------------------------------------- 246 (500)
T COG1129 247 -------------------------------------------------------------------------------- 246 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCcccc
Q 000406 1221 TLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLIDN 1300 (1560)
Q Consensus 1221 ~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~~~ 1300 (1560)
+.+.-+. .
T Consensus 247 ----------------------------------------------------------------------~~~~~~~-~- 254 (500)
T COG1129 247 ----------------------------------------------------------------------LEDLFPE-P- 254 (500)
T ss_pred ----------------------------------------------------------------------hhhhccc-c-
Confidence 0000000 0
Q ss_pred ccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEec
Q 000406 1301 VKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDL 1380 (1560)
Q Consensus 1301 ~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi 1380 (1560)
. .....+..++++|++.. ..++|+||++++||++||.|--|||+|-|+++|+|..++.+|+|.+||.++
T Consensus 255 ~----~~~~~~~~l~v~~l~~~-------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G~~v 323 (500)
T COG1129 255 P----EEGIGEPVLEVRNLSGG-------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDGKPV 323 (500)
T ss_pred c----ccCCCCcEEEEecCCCC-------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECCEEc
Confidence 0 00011224778887642 158999999999999999999999999999999999999999999999998
Q ss_pred CCCCH-HHHhhceEEEcCCCC----CCCccHHHHHhcCCC-CCCHH-HHHHHHHHHhHHHHHHhCC---CCccccccCCC
Q 000406 1381 REINV-KWLRKQTALVGQEPA----LFAGTIRDNIALGNP-KASWA-EIEEAAEEAYIHKFISSLP---QGYETQVGESG 1450 (1560)
Q Consensus 1381 ~~i~l-~~LR~~I~~VpQdp~----LF~gTIreNL~~g~~-~~sd~-eI~~al~~a~l~~~I~~Lp---~Gldt~Vge~G 1450 (1560)
.--++ +.++..|+|||-|.. +...+|++|+.+..- ..... -+....+.....+++..|. .+.+.+++
T Consensus 324 ~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v~--- 400 (500)
T COG1129 324 RIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPIG--- 400 (500)
T ss_pred cCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchhh---
Confidence 88776 478889999999884 556799999987521 11101 3455666667777887773 34556665
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHh-hcCEEEEEeCCEE
Q 000406 1451 VQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIR-EANMIAVVRDGAV 1528 (1560)
Q Consensus 1451 ~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~-~aDrIlVLd~G~I 1528 (1560)
+||||.+|+++|||+|..+|+||||||||.++|..+.+.|.+.|+++. +|.+||+||-.+..+. .||||+||.+|+|
T Consensus 401 -~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~Gri 479 (500)
T COG1129 401 -TLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMREGRI 479 (500)
T ss_pred -cCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEECCEE
Confidence 699999999999999999999999999999999999999999999875 5699999999999987 5999999999999
Q ss_pred EEe
Q 000406 1529 VEY 1531 (1560)
Q Consensus 1529 vE~ 1531 (1560)
+..
T Consensus 480 ~~e 482 (500)
T COG1129 480 VGE 482 (500)
T ss_pred EEE
Confidence 874
No 97
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=3.3e-61 Score=618.88 Aligned_cols=200 Identities=26% Similarity=0.344 Sum_probs=164.6
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
-|+++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+++ +.+|
T Consensus 508 ~L~~~~ls~~y~~~--~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 508 IISFSDASFGYPGG--PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred eEEEEeeEEEeCCC--CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 59999999999632 3589999999999999999999999999999999999999999999875 2479
Q ss_pred EEEcCCCCCCCccHHHHHhc----CCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHc
Q 000406 1393 ALVGQEPALFAGTIRDNIAL----GNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAIL 1468 (1560)
Q Consensus 1393 ~~VpQdp~LF~gTIreNL~~----g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALL 1468 (1560)
+|+||++. ...++.+|... ..+..+++++.++++..++.+.. .......||||||||++|||||+
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~----------~~~~~~~LSgGqkqRvaLAraL~ 643 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNL----------ALQPMYTLSGGQKSRVAFAKITF 643 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHH----------hcCCccccCHHHHHHHHHHHHHh
Confidence 99999973 23355555321 12334566777777776664211 12234579999999999999999
Q ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEE-EecCHHHHH
Q 000406 1469 KGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVV-EYGSHETLL 1538 (1560)
Q Consensus 1469 r~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~Iv-E~Gt~~eLl 1538 (1560)
.+|+||||||||++||+.+...+.+.|++. + +|+|+|||++..+.. ||+|++|++|+|+ ..|++++..
T Consensus 644 ~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~~ 713 (718)
T PLN03073 644 KKPHILLLDEPSNHLDLDAVEALIQGLVLF-Q-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDYK 713 (718)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHHH
Confidence 999999999999999999999999999875 3 599999999999976 9999999999998 568887754
No 98
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=1.5e-58 Score=595.83 Aligned_cols=531 Identities=15% Similarity=0.119 Sum_probs=431.3
Q ss_pred cHHHHHHHhhhhhH----HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHH
Q 000406 331 GLFSLFKYSTKLDM----ILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVM 406 (1560)
Q Consensus 331 ~~~~l~~y~~~~~~----~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 406 (1560)
.+.++++|..++.+ ..+++.+++.++..++..+.+++.+.+++...... ...+...+..++++++++.++..
T Consensus 78 ~~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~----~~~f~~~l~~~~l~~~~~~~~~~ 153 (659)
T TIGR00954 78 KLDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRS----PRNFAWILFKWFLIAPPASFINS 153 (659)
T ss_pred HHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcC----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 35567777765443 35667777778888888899999999999877432 11222223344445555556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 407 MGAYLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYT 486 (1560)
Q Consensus 407 ~~~~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~i 486 (1560)
+..++..++...+..++..++|..++++....++.+||. ++|++.+|+++|++.+.+.+...+..++..++.+++.++
T Consensus 154 ~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~--~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~ 231 (659)
T TIGR00954 154 AIKYLLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS--RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSF 231 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC--CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666777777777888888889999999888888999974 689999999999999999999999999999999998888
Q ss_pred HHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhH
Q 000406 487 VGFL-RSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADS 565 (1560)
Q Consensus 487 i~~~-~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~ 565 (1560)
+++. ++|.+++++++.+|+.+++.+++.+.+.++..+.++..++..+...|.++|+++||+|+.|+.+.+++.+..++.
T Consensus 232 ~L~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l 311 (659)
T TIGR00954 232 KLLTALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRL 311 (659)
T ss_pred HHHHhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 7775 999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hHHHhHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH-hc----ccccHHHHHHH-HHH---HHHHHHHHHHHHHHHH
Q 000406 566 IPFGAKLGFAKGAGMGVIYLVTYA--TWALAFWYGSILV-AR----KELSGGAAIAC-FFG---VNVGGRGLALSLSYFA 634 (1560)
Q Consensus 566 ~~~~~k~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~lv-~~----g~ls~g~~~~~-l~~---~~~~~~~l~~~~~~~~ 634 (1560)
.+...+.....+....+..++... ..++.++.|...+ .. |.++.|.+++. ..+ +..+..++..+...+.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~ 391 (659)
T TIGR00954 312 VEHLNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGR 391 (659)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888877777776665432 2222223333232 22 67888876653 322 3445678888889999
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCC------C-CC--CC-------------CcCCCCcccEEEEEEEEEcCCCCCccccc
Q 000406 635 QFAQGTVAATRVFEIIDRVPEIDP------Y-NS--EG-------------RKLSSVSGKIEFKGVTFAYPSRPETVILR 692 (1560)
Q Consensus 635 ~~~~a~~a~~Ri~~~l~~~~~~~~------~-~~--~~-------------~~~~~~~g~i~~~~vs~~y~~~~~~~vL~ 692 (1560)
.+.++.++.+|+.++++..++.+. . +. .. .......+.|+++||+|+|+++ .++|+
T Consensus 392 ~i~~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~--~~il~ 469 (659)
T TIGR00954 392 DMTRLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG--DVLIE 469 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC--Ceeee
Confidence 999999999999999975432210 0 00 00 0011134579999999999742 36999
Q ss_pred cceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcC
Q 000406 693 SLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMG 772 (1560)
Q Consensus 693 ~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g 772 (1560)
|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+++ |++|+||||+|.+|++|++|||.++
T Consensus 470 ~isl~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~ 538 (659)
T TIGR00954 470 SLSFEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYP 538 (659)
T ss_pred cceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcC
Confidence 99999999999999999999999999999999999999999874 4679999999999999999999987
Q ss_pred C-------CCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHH
Q 000406 773 K-------ENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSE 845 (1560)
Q Consensus 773 ~-------~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~ 845 (1560)
. +..+++++.++++.+++++++.. |.|+||..+ .+.+||||||||++|||||+++|++||||||||+||++
T Consensus 539 ~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~ 616 (659)
T TIGR00954 539 DSSEDMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVD 616 (659)
T ss_pred CChhhhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHH
Confidence 4 23456778889999999998877 899999876 56799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeC
Q 000406 846 SESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQ 884 (1560)
Q Consensus 846 ~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~ 884 (1560)
+++.+.+.+++. |+|+|+||||++.+..||+|++|+.
T Consensus 617 ~~~~l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 617 VEGYMYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 999999999874 8999999999999989999999973
No 99
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=5.9e-60 Score=551.46 Aligned_cols=457 Identities=24% Similarity=0.438 Sum_probs=363.0
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCC-ccHHHHhcc
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKS-LQVKWLRTQ 750 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~-~~~~~lr~~ 750 (1560)
.|+++++++.|| ...+++||||+|++||++||+|+||+|||||+++|.|+|+|++|+|.+||++++- -+.+.+|..
T Consensus 4 ~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~G 80 (501)
T COG3845 4 ALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLG 80 (501)
T ss_pred eEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcC
Confidence 589999999998 3679999999999999999999999999999999999999999999999999974 456688899
Q ss_pred EEEEecCCcCccc-cHHHHHhcCCCCC-----CHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHH
Q 000406 751 IGMVGQEPILFAT-SILENVLMGKENA-----TMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALAR 824 (1560)
Q Consensus 751 i~~v~Q~~~lf~~-Tv~eNi~~g~~~~-----~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialAR 824 (1560)
||+|+|++.|++. ||.|||.+|.+.. +..+.. ..+.+..++. |++-...+...+||-||||||.|-+
T Consensus 81 IGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~-----~~i~~l~~~y--Gl~vdp~~~V~dLsVG~qQRVEIlK 153 (501)
T COG3845 81 IGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQAR-----ARIKELSERY--GLPVDPDAKVADLSVGEQQRVEILK 153 (501)
T ss_pred CcEEeeccccccccchhhhhhhcCccccccccCHHHHH-----HHHHHHHHHh--CCCCCccceeecCCcchhHHHHHHH
Confidence 9999999999987 9999999998642 122221 1222333333 6666667777899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhhcch
Q 000406 825 AMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLERGGA 902 (1560)
Q Consensus 825 Al~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~~~~ 902 (1560)
|||++|++||||||||-|-|...+.+++.++.+. .|+|||+|||+++++.. |||+.||++|+++..-++..
T Consensus 154 aLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~~~~------- 226 (501)
T COG3845 154 ALYRGARLLILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVDPVA------- 226 (501)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeecCCC-------
Confidence 9999999999999999999999999999999884 69999999999999987 99999999999865322100
Q ss_pred HHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhhHhhhhCCCCchhhHHHH
Q 000406 903 YHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQTVEEEQQKPRPRKFQLSEI 982 (1560)
Q Consensus 903 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 982 (1560)
+.. . . .+
T Consensus 227 -----------------------~~t-----~-------------------------~--------------------el 233 (501)
T COG3845 227 -----------------------ETT-----E-------------------------E--------------------EL 233 (501)
T ss_pred -----------------------CCC-----H-------------------------H--------------------HH
Confidence 000 0 0 00
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 983 WKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGWAG 1062 (1560)
Q Consensus 983 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 1062 (1560)
.. ++ +
T Consensus 234 a~------------lM-----------------------v---------------------------------------- 238 (501)
T COG3845 234 AE------------LM-----------------------V---------------------------------------- 238 (501)
T ss_pred HH------------Hh-----------------------c----------------------------------------
Confidence 00 00 0
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1063 TKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTLVA 1142 (1560)
Q Consensus 1063 ~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l~lv~ 1142 (1560)
.. +
T Consensus 239 -----------------------G~--------------~---------------------------------------- 241 (501)
T COG3845 239 -----------------------GR--------------E---------------------------------------- 241 (501)
T ss_pred -----------------------CC--------------c----------------------------------------
Confidence 00 0
Q ss_pred HHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 000406 1143 AALTPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILGLTL 1222 (1560)
Q Consensus 1143 l~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1222 (1560)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T COG3845 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCcccccc
Q 000406 1223 GFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLIDNVK 1302 (1560)
Q Consensus 1223 ~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~~~~~ 1302 (1560)
. .....
T Consensus 242 --------------------------v---------------------------------------------~~~~~--- 247 (501)
T COG3845 242 --------------------------V---------------------------------------------VLRVV--- 247 (501)
T ss_pred --------------------------c---------------------------------------------ccccc---
Confidence 0 00000
Q ss_pred ccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEec-C
Q 000406 1303 GRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDL-R 1381 (1560)
Q Consensus 1303 ~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi-~ 1381 (1560)
.....+...-++++|++..=.. ....+++|||+|++||++||.|-.|-|-+.|+.+|.|+..|.+|+|+++|.|+ .
T Consensus 248 -~~~~~pg~~vL~V~~L~v~~~~--~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~v~~ 324 (501)
T COG3845 248 -KPPSTPGEVVLEVEDLSVKDRR--GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKDVLG 324 (501)
T ss_pred -cCCCCCCCeEEEEeeeEeecCC--CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEeccc
Confidence 0011112335899999985432 24689999999999999999999999999999999999999999999999997 6
Q ss_pred CCCHHHHhh-ceEEEcCCCC----CCCccHHHHHhcCCCC---------CCHHHHHHHHHHHhHHHHHHhC---CCCccc
Q 000406 1382 EINVKWLRK-QTALVGQEPA----LFAGTIRDNIALGNPK---------ASWAEIEEAAEEAYIHKFISSL---PQGYET 1444 (1560)
Q Consensus 1382 ~i~l~~LR~-~I~~VpQdp~----LF~gTIreNL~~g~~~---------~sd~eI~~al~~a~l~~~I~~L---p~Gldt 1444 (1560)
..+...+|+ .++|||.|.+ ..+.|+.||+.++.-. ....++... ..+.++++ +.+.++
T Consensus 325 ~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~-----a~~li~~fdVr~~~~~~ 399 (501)
T COG3845 325 RLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKF-----ARELIEEFDVRAPSPDA 399 (501)
T ss_pred cCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHH-----HHHHHHHcCccCCCCCc
Confidence 778877665 5999999995 6788999999875322 122334333 23334433 345666
Q ss_pred cccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEE
Q 000406 1445 QVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAV 1522 (1560)
Q Consensus 1445 ~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlV 1522 (1560)
++. +||||+.||+-+||-|.++|++||..+||-+||..+.+.|.+.|.+.. +|+.|++|+-.|+.+.. ||||.|
T Consensus 400 ~a~----~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDrIaV 475 (501)
T COG3845 400 PAR----SLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDRIAV 475 (501)
T ss_pred chh----hcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhheeee
Confidence 655 799999999999999999999999999999999999999999998764 67899999999999866 999999
Q ss_pred EeCCEEEEecCHHH
Q 000406 1523 VRDGAVVEYGSHET 1536 (1560)
Q Consensus 1523 Ld~G~IvE~Gt~~e 1536 (1560)
|.+|+|+...++++
T Consensus 476 i~~Gri~~~~~~~~ 489 (501)
T COG3845 476 IYEGRIVGIVPPEE 489 (501)
T ss_pred eeCCceeccccccc
Confidence 99999998877665
No 100
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=2e-58 Score=594.59 Aligned_cols=527 Identities=15% Similarity=0.079 Sum_probs=420.2
Q ss_pred HHHHHHhhhhhHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 000406 979 LSEIWKLQRPEFA-----MIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTG 1053 (1560)
Q Consensus 979 ~~~l~~~~~~~~~-----~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 1053 (1560)
+..++++.++++. .+++++++.++...+....|.+.+.+++................+.++++++.++..+..++
T Consensus 79 ~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~ 158 (659)
T TIGR00954 79 LDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYL 158 (659)
T ss_pred HHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777777665 45566666666777777888888888887664332212111223334444445555566666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1054 QQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLV 1133 (1560)
Q Consensus 1054 ~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~ 1133 (1560)
..++......++..++++..+++....++.||| + ++|++++|+++|++.+.+.+...+..++..++.++++++.++.
T Consensus 159 ~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d--~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~ 235 (659)
T TIGR00954 159 LKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLD--S-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLT 235 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeccCC--C-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667777788888888888888888888888887 2 7899999999999999999999999999999999988887776
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHH-HHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHH
Q 000406 1134 -LNWRLTLVAAALTPFTLGASYLS-LIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKS 1211 (1560)
Q Consensus 1134 -~~~~l~lv~l~~ipl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~ 1211 (1560)
++|.+++++++.+|+.+++..+. .......+..+...+...+.+.|.+.|+++|++|+.++.+.+++++..++..+..
T Consensus 236 ~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~ 315 (659)
T TIGR00954 236 ALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHL 315 (659)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888777655443 3333333444667778899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHh-c----CcccHHHHHH-HHHH---HHHHHHHHHHHHhhHHHHHH
Q 000406 1212 VKRSQILGLTLGFSQGAMYV--AYTFTLWFGAYLVK-Q----GHASFGVVYK-IFLI---LVLSSFSVGQLAGLAPDTSM 1280 (1560)
Q Consensus 1212 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~lv~-~----g~~s~g~~~~-~~~~---~~~~~~~i~~l~~~~~~~~~ 1280 (1560)
.+..++......+..++... ..+..++.|...+. . |.++.|.+++ ++.+ +..+..++..+.....++..
T Consensus 316 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~ 395 (659)
T TIGR00954 316 NLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTR 395 (659)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888888887776543 22223333442332 2 7888887766 3333 44557889999999999999
Q ss_pred HHHHHHHHHHHhccCCcccc-------ccc---c-------------ccCCCCCccEEEEEEEEEcCCCCCccceeeeeE
Q 000406 1281 AATAIPAVLQITKRKPLIDN-------VKG---R-------------KLERSKPLGIELKMVTFTYPSRPEVTVLKDFCL 1337 (1560)
Q Consensus 1281 ~~~s~~ri~~i~~~~~~~~~-------~~~---~-------------~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf 1337 (1560)
+..+.+|+.++++.+++.+. ... . .......+.|+++||+|+|+++ .++|+|+||
T Consensus 396 ~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~--~~il~~isl 473 (659)
T TIGR00954 396 LAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG--DVLIESLSF 473 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC--CeeeecceE
Confidence 99999999999875432110 000 0 0000123459999999999743 369999999
Q ss_pred EEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCC---
Q 000406 1338 KVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGN--- 1414 (1560)
Q Consensus 1338 ~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~--- 1414 (1560)
+|++||++||+||||||||||+++|+|+++|++|+|.+|+ |++++||||+|.+|++|++|||.++.
T Consensus 474 ~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~ 542 (659)
T TIGR00954 474 EVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSE 542 (659)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChh
Confidence 9999999999999999999999999999999999999874 67899999999999999999999863
Q ss_pred ----CCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHH
Q 000406 1415 ----PKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKH 1490 (1560)
Q Consensus 1415 ----~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~ 1490 (1560)
+..++++++++++.+++++++.. |.||||..+ .+.+||||||||++|||||+++|++||||||||+||+++++.
T Consensus 543 ~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~ 620 (659)
T TIGR00954 543 DMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGY 620 (659)
T ss_pred hhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHH
Confidence 34678899999999999999987 999999987 467999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeC
Q 000406 1491 VQDALRKVSKRATTIVVAHRLSTIREANMIAVVRD 1525 (1560)
Q Consensus 1491 I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~ 1525 (1560)
+++.+++. ++|+|+||||++++..||+|++|+.
T Consensus 621 l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 621 MYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 99999874 8999999999999999999999973
No 101
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=1.1e-60 Score=604.66 Aligned_cols=436 Identities=24% Similarity=0.326 Sum_probs=318.4
Q ss_pred EEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEE-----------ECCeecCCccHH
Q 000406 677 GVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLIT-----------LDGHDLKSLQVK 745 (1560)
Q Consensus 677 ~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~-----------i~g~~i~~~~~~ 745 (1560)
+++++|+. +..+|++++ .+++||+++|+||||||||||+++|+|+++|++|+|. ++|.++.+....
T Consensus 78 ~~~~~yg~--~~~~L~~l~-~i~~Gev~gLvG~NGaGKSTLlkiL~G~l~p~~G~i~~~~~~~~~~~~~~G~~l~~~~~~ 154 (590)
T PRK13409 78 EPVHRYGV--NGFKLYGLP-IPKEGKVTGILGPNGIGKTTAVKILSGELIPNLGDYEEEPSWDEVLKRFRGTELQNYFKK 154 (590)
T ss_pred CceEEecC--CceeEecCC-cCCCCCEEEEECCCCCCHHHHHHHHhCCccCCCccccCCCcHHHHHHHhCChHHHHHHHH
Confidence 48899963 245899999 8999999999999999999999999999999999997 899888654321
Q ss_pred --HHhccEE----EEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHH
Q 000406 746 --WLRTQIG----MVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQR 819 (1560)
Q Consensus 746 --~lr~~i~----~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQR 819 (1560)
..+.+++ +++|.|.+|.+|++||+.... ..+++ .+.++.+ |++...+....+||||||||
T Consensus 155 ~~~~~~~~~~~~q~~~~~p~~~~~tv~e~l~~~~---~~~~~---------~~~l~~l--~l~~~~~~~~~~LSgGe~qr 220 (590)
T PRK13409 155 LYNGEIKVVHKPQYVDLIPKVFKGKVRELLKKVD---ERGKL---------DEVVERL--GLENILDRDISELSGGELQR 220 (590)
T ss_pred HhccCcceeecccchhhhhhhhcchHHHHHHhhh---HHHHH---------HHHHHHc--CCchhhcCChhhCCHHHHHH
Confidence 1122344 455566778889999987421 11112 2233343 55555667778999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 820 IALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 820 ialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
++|||||+++|+|||||||||+||+.+...+.+.|+++.+|+|+|+|||+++.+.. ||+|++|+++. |.+.....
T Consensus 221 v~ia~al~~~p~lllLDEPts~LD~~~~~~l~~~i~~l~~g~tvIivsHd~~~l~~~~D~v~vl~~~~----g~~g~~~~ 296 (590)
T PRK13409 221 VAIAAALLRDADFYFFDEPTSYLDIRQRLNVARLIRELAEGKYVLVVEHDLAVLDYLADNVHIAYGEP----GAYGVVSK 296 (590)
T ss_pred HHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCc----cccceecc
Confidence 99999999999999999999999999999999999988558999999999999976 99999997631 10000000
Q ss_pred hcchHHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHHhhhhHhhhhCCCCchhh
Q 000406 899 RGGAYHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAEIQTVEEEQQKPRPRKFQ 978 (1560)
Q Consensus 899 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 978 (1560)
+ . . . +. .
T Consensus 297 ------------------~---------~---~--------~-~~-------------~--------------------- 303 (590)
T PRK13409 297 ------------------P---------K---G--------V-RV-------------G--------------------- 303 (590)
T ss_pred ------------------h---------h---H--------H-HH-------------h---------------------
Confidence 0 0 0 0 00 0
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 979 LSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFC 1058 (1560)
Q Consensus 979 ~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 1058 (1560)
. ..+.. .+.
T Consensus 304 i---------------------------------------~~~~~-------------------------------~~~- 312 (590)
T PRK13409 304 I---------------------------------------NEYLK-------------------------------GYL- 312 (590)
T ss_pred H---------------------------------------HHHHH-------------------------------hcc-
Confidence 0 00000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 1059 GWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRL 1138 (1560)
Q Consensus 1059 ~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~~~~i~~l~~~~~~~~~l 1138 (1560)
.. ..+.+
T Consensus 313 -----------~~--------e~~~~------------------------------------------------------ 319 (590)
T PRK13409 313 -----------PE--------ENMRI------------------------------------------------------ 319 (590)
T ss_pred -----------hh--------hhhhc------------------------------------------------------
Confidence 00 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHH
Q 000406 1139 TLVAAALTPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQIL 1218 (1560)
Q Consensus 1139 ~lv~l~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 1218 (1560)
. ..
T Consensus 320 --------------------------------------------------------------~---~~------------ 322 (590)
T PRK13409 320 --------------------------------------------------------------R---PE------------ 322 (590)
T ss_pred --------------------------------------------------------------c---cc------------
Confidence 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccCCcc
Q 000406 1219 GLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLI 1298 (1560)
Q Consensus 1219 ~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~~~~ 1298 (1560)
.+. ....+..
T Consensus 323 -----------------------------~~~-----------------------------------------~~~~~~~ 332 (590)
T PRK13409 323 -----------------------------PIE-----------------------------------------FEERPPR 332 (590)
T ss_pred -----------------------------Ccc-----------------------------------------eecCCCc
Confidence 000 0000000
Q ss_pred ccccccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCE
Q 000406 1299 DNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGV 1378 (1560)
Q Consensus 1299 ~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGv 1378 (1560)
. . .....-++++|++++|.+ ..|+++||+|++||++||+|+||||||||+++|+|+.+|++|+|.++
T Consensus 333 ~---~----~~~~~~l~~~~ls~~~~~----~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-- 399 (590)
T PRK13409 333 D---E----SERETLVEYPDLTKKLGD----FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-- 399 (590)
T ss_pred c---c----cCCceEEEEcceEEEECC----EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe--
Confidence 0 0 001224899999999953 25999999999999999999999999999999999999999999986
Q ss_pred ecCCCCHHHHhhceEEEcCCCCC-CCccHHHHHhcCCCCCC-HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChH
Q 000406 1379 DLREINVKWLRKQTALVGQEPAL-FAGTIRDNIALGNPKAS-WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGG 1456 (1560)
Q Consensus 1379 di~~i~l~~LR~~I~~VpQdp~L-F~gTIreNL~~g~~~~s-d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGG 1456 (1560)
+ .++|+||++.+ ++.|++||+.++..... ...+.++++..++.+.. ......||||
T Consensus 400 -~----------~i~y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~~-----------~~~~~~LSGG 457 (590)
T PRK13409 400 -L----------KISYKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLERLL-----------DKNVKDLSGG 457 (590)
T ss_pred -e----------eEEEecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHHHH-----------hCCcccCCHH
Confidence 1 59999999875 46799999987522221 23345555555554332 2334479999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecC
Q 000406 1457 QKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGS 1533 (1560)
Q Consensus 1457 QrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt 1533 (1560)
||||++|||||+++|+||||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||||++|++ ++...|+
T Consensus 458 e~QRvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~ 536 (590)
T PRK13409 458 ELQRVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGH 536 (590)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeee
Confidence 99999999999999999999999999999999999999998753 6899999999999875 999999975 7777765
No 102
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=3.7e-59 Score=574.59 Aligned_cols=483 Identities=28% Similarity=0.435 Sum_probs=347.1
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|+. +++|+|+||++.+|+++||||+||||||||+++|+|...|++|+|...+. -+|
T Consensus 3 ~i~~~~ls~~~g~---~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~-----------~~v 68 (530)
T COG0488 3 MITLENLSLAYGD---RPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKG-----------LRV 68 (530)
T ss_pred eEEEeeeEEeeCC---ceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCC-----------ceE
Confidence 4889999999963 56999999999999999999999999999999999999999999998752 269
Q ss_pred EEEecCCcCccc-cHHHHHhcCCCCCCH--HHHHHHH------------------H-------HhhhHHHHHhCCCCCCc
Q 000406 752 GMVGQEPILFAT-SILENVLMGKENATM--KEAVAAC------------------K-------AASAHSFISELPLGYDT 803 (1560)
Q Consensus 752 ~~v~Q~~~lf~~-Tv~eNi~~g~~~~~~--~~~~~~~------------------~-------~~~~~~~i~~l~~gl~t 803 (1560)
+|++|++.+.+. ||.+.+..+...... .+...+. . .+.+...+..+ |+..
T Consensus 69 ~~l~Q~~~~~~~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gL--g~~~ 146 (530)
T COG0488 69 GYLSQEPPLDPEKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGL--GFPD 146 (530)
T ss_pred EEeCCCCCcCCCccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcC--CCCc
Confidence 999999999876 999999887542110 0000000 0 02222333333 4443
Q ss_pred ccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEE
Q 000406 804 QVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVL 882 (1560)
Q Consensus 804 ~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl 882 (1560)
. .....+||||||.|++|||||+.+|+||||||||++||.++..++.+.|.+.. | |+|+||||.+++.. |++|+.+
T Consensus 147 ~-~~~~~~LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~~-g-tviiVSHDR~FLd~V~t~I~~l 223 (530)
T COG0488 147 E-DRPVSSLSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRYP-G-TVIVVSHDRYFLDNVATHILEL 223 (530)
T ss_pred c-cCchhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhCC-C-cEEEEeCCHHHHHHHhhheEEe
Confidence 3 55667999999999999999999999999999999999999999999998654 5 99999999999987 9999999
Q ss_pred eCCeEE-EecChhhHhhhcchHHHHHHHHHhhccCccccchhcccccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhHHH
Q 000406 883 DQGSVV-EIGNHRQLLERGGAYHDLVKLASEAVSQPQSKQKDAKRGIEFSIYEKSVIEVSRSRYANEVSKSKYFKSMQAE 961 (1560)
Q Consensus 883 ~~G~iv-~~G~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 961 (1560)
+.|++. ..|+++..++.. ..... . .. ... ...+.+
T Consensus 224 d~g~l~~y~Gny~~~~~~r----------~~~~~------~-~~--------------------------~~~-~~~~~~ 259 (530)
T COG0488 224 DRGKLTPYKGNYSSYLEQK----------AERLR------Q-EA--------------------------AAY-EKQQKE 259 (530)
T ss_pred cCCceeEecCCHHHHHHHH----------HHHHH------H-HH--------------------------HHH-HHHHHH
Confidence 999885 456665544321 00000 0 00 000 000000
Q ss_pred hhhhHhhhhCCCCchhhHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhHHHHHHHHH
Q 000406 962 IQTVEEEQQKPRPRKFQLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALV 1041 (1560)
Q Consensus 962 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 1041 (1560)
.+.... |
T Consensus 260 -----------------~~~~~~------------------------------------~-------------------- 266 (530)
T COG0488 260 -----------------LAKEQE------------------------------------W-------------------- 266 (530)
T ss_pred -----------------HHHHHH------------------------------------H--------------------
Confidence 000000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHHHH
Q 000406 1042 GLGFGCIIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGL 1121 (1560)
Q Consensus 1042 ~l~~~~~~~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~~~ 1121 (1560)
+.|+..
T Consensus 267 ------------------------------------------------------i~r~~~-------------------- 272 (530)
T COG0488 267 ------------------------------------------------------IRRGKA-------------------- 272 (530)
T ss_pred ------------------------------------------------------HHHHHh--------------------
Confidence 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHHHHHHH
Q 000406 1122 SSAAVGLGVSLVLNWRLTLVAAALTPFTLGASYLSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFD 1201 (1560)
Q Consensus 1122 ~~~i~~l~~~~~~~~~l~lv~l~~ipl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~~~~~~ 1201 (1560)
...+.. ..+...++
T Consensus 273 --------------------------------------~~~~~k--------------------------~a~sr~k~-- 286 (530)
T COG0488 273 --------------------------------------AASKAK--------------------------KAKSRIKR-- 286 (530)
T ss_pred --------------------------------------ccchHH--------------------------HHHHHHHH--
Confidence 000000 00000000
Q ss_pred HHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Q 000406 1202 KALSEPKKKSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMA 1281 (1560)
Q Consensus 1202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~~~~~~ 1281 (1560)
T Consensus 287 -------------------------------------------------------------------------------- 286 (530)
T COG0488 287 -------------------------------------------------------------------------------- 286 (530)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHH-hccCCcc-cc-c--cccccC-CCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCH
Q 000406 1282 ATAIPAVLQI-TKRKPLI-DN-V--KGRKLE-RSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGK 1355 (1560)
Q Consensus 1282 ~~s~~ri~~i-~~~~~~~-~~-~--~~~~~~-~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGK 1355 (1560)
++++.+- ....+.. .. . .-.... ...+.-++++||+++|++. +++++++||.|.+|++||||||||+||
T Consensus 287 ---l~k~~~~~~~~~~~~~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~--~~l~~~~s~~i~~g~riaiiG~NG~GK 361 (530)
T COG0488 287 ---LEKLEARLAEERPVEEGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG--RLLLKDLSFRIDRGDRIAIVGPNGAGK 361 (530)
T ss_pred ---HHHHHhhhhhcccccccccceeeccCCcccCCCeeEEEeccccccCCC--ceeecCceEEecCCCEEEEECCCCCCH
Confidence 0111100 0000000 00 0 000011 1223459999999999643 469999999999999999999999999
Q ss_pred HHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceEEEcCCC-CCC-CccHHHHHhcCCCCCCHHHHHHHHHHHhHHH
Q 000406 1356 STVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEP-ALF-AGTIRDNIALGNPKASWAEIEEAAEEAYIHK 1433 (1560)
Q Consensus 1356 STLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp-~LF-~gTIreNL~~g~~~~sd~eI~~al~~a~l~~ 1433 (1560)
|||+++|+|-..|.+|+|.++-. -++||.+|+. .++ +.|+-|++.-..|+..+.++...|...++..
T Consensus 362 STLlk~l~g~~~~~~G~v~~g~~-----------v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~ 430 (530)
T COG0488 362 STLLKLLAGELGPLSGTVKVGET-----------VKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTG 430 (530)
T ss_pred HHHHHHHhhhcccCCceEEeCCc-----------eEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCCh
Confidence 99999999999999999998632 2589999998 444 3489999987666655777877777766542
Q ss_pred HHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHH
Q 000406 1434 FISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLST 1513 (1560)
Q Consensus 1434 ~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlst 1513 (1560)
+...++|+ .||||||-|+.||+.++.+|.+|||||||.+||.+|...+.++|.+. ..|||+|||+...
T Consensus 431 ------~~~~~~v~----~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f--~Gtvl~VSHDr~F 498 (530)
T COG0488 431 ------EDQEKPVG----VLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLDF--EGTVLLVSHDRYF 498 (530)
T ss_pred ------HHHhCchh----hcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHhC--CCeEEEEeCCHHH
Confidence 22344554 69999999999999999999999999999999999999999999875 4699999999999
Q ss_pred Hhh-cCEEEEEeCCEEEEe-cCHHHHHh
Q 000406 1514 IRE-ANMIAVVRDGAVVEY-GSHETLLA 1539 (1560)
Q Consensus 1514 i~~-aDrIlVLd~G~IvE~-Gt~~eLl~ 1539 (1560)
+.. |++|+++++ ++.++ |.+++.++
T Consensus 499 l~~va~~i~~~~~-~~~~~~g~y~~y~~ 525 (530)
T COG0488 499 LDRVATRIWLVED-KVEEFEGGYEDYLE 525 (530)
T ss_pred HHhhcceEEEEcC-ceeEcCCCHHHHHH
Confidence 987 999999999 88887 89988876
No 103
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=6.6e-51 Score=470.59 Aligned_cols=237 Identities=28% Similarity=0.438 Sum_probs=223.7
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+|+||+++|+.. ..++|+||||+|++||++||+|+||||||||+++|+|+++ .+|+|.|||+++..++...+|++|
T Consensus 2 ~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 2 QMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred eEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 58999999999743 3469999999999999999999999999999999999998 789999999999999999999999
Q ss_pred EEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCC
Q 000406 1393 ALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSR 1472 (1560)
Q Consensus 1393 ~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ 1472 (1560)
+||||+|.+|++|+++||++.. ..++++++++++.+++.+++..+|.+|++.++++|.+||||||||+||||||+++|+
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~ 158 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYG-KWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAK 158 (275)
T ss_pred EEECCCcccchhhHHHHhhhcc-CCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999998643 356789999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHhhccChHHHHHHHH
Q 000406 1473 VLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLASHLNGVYASLVRA 1552 (1560)
Q Consensus 1473 ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~~l~~~ 1552 (1560)
||||||||++||+.+++.+++.|++.+.++|+|+||||++++..||||+||++|+|++.|+|++|++ ..+.|++++..
T Consensus 159 illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~--~~~~~~~~~~~ 236 (275)
T cd03289 159 ILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLN--EKSHFKQAISP 236 (275)
T ss_pred EEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhh--CcHHHHHHHhh
Confidence 9999999999999999999999998888899999999999999999999999999999999999998 46889999977
Q ss_pred hh
Q 000406 1553 ET 1554 (1560)
Q Consensus 1553 q~ 1554 (1560)
..
T Consensus 237 ~~ 238 (275)
T cd03289 237 SD 238 (275)
T ss_pred cc
Confidence 64
No 104
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-49 Score=417.89 Aligned_cols=218 Identities=32% Similarity=0.573 Sum_probs=190.4
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecC-CccHHHHhcc
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLK-SLQVKWLRTQ 750 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~-~~~~~~lr~~ 750 (1560)
.|+++||+++|+. ..||+||||+|++||+++||||||||||||+++|.|+.+|++|+|.+||.++. ..+...+|++
T Consensus 2 mi~i~~l~K~fg~---~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFGD---KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeCC---eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 4899999999973 56999999999999999999999999999999999999999999999998774 3377889999
Q ss_pred EEEEecCCcCccc-cHHHHHhcCCCC---CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHh
Q 000406 751 IGMVGQEPILFAT-SILENVLMGKEN---ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAM 826 (1560)
Q Consensus 751 i~~v~Q~~~lf~~-Tv~eNi~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl 826 (1560)
+|+|+|+..||+. ||.||+.++.-. .+.++..+. +.+.++.. |+....+..+.+|||||||||||||||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~-----A~~lL~~V--GL~~ka~~yP~qLSGGQqQRVAIARAL 151 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREK-----ALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 151 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHH-----HHHHHHHc--CchhhhhhCccccCcHHHHHHHHHHHH
Confidence 9999999999987 999999987421 122222211 12334443 666667778889999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 827 IKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 827 ~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
..+|+++|+|||||||||+....+.+.++++. .|.|.|+|||.+.+++. ||||+.|++|+|+++|+|+++..+
T Consensus 152 aM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~ 226 (240)
T COG1126 152 AMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDN 226 (240)
T ss_pred cCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999984 59999999999999988 999999999999999999998764
No 105
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-47 Score=406.10 Aligned_cols=223 Identities=33% Similarity=0.496 Sum_probs=193.6
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecC-CCCHHHHhhc
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLR-EINVKWLRKQ 1391 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~-~i~l~~LR~~ 1391 (1560)
-|+++||+.+|.. ..||+|||++|++||+++|+||||||||||+++|.++.+|++|+|.|||.++. +.+...+|++
T Consensus 2 mi~i~~l~K~fg~---~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFGD---KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeCC---eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 3899999999963 46999999999999999999999999999999999999999999999998774 3378899999
Q ss_pred eEEEcCCCCCCC-ccHHHHHhcCC---CCCCHHH----HHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000406 1392 TALVGQEPALFA-GTIRDNIALGN---PKASWAE----IEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAI 1463 (1560)
Q Consensus 1392 I~~VpQdp~LF~-gTIreNL~~g~---~~~sd~e----I~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaL 1463 (1560)
+|+|+|...||+ -|+.||+.++- ...+.+| -.+.|++++|.+.....| .+||||||||+||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP-----------~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP-----------AQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc-----------cccCcHHHHHHHH
Confidence 999999999997 59999999862 1233333 345667777777666665 4799999999999
Q ss_pred HHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhhc
Q 000406 1464 ARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLASH 1541 (1560)
Q Consensus 1464 ARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~~ 1541 (1560)
||||..+|+|+++|||||+|||+.-..+.+.++++. +|.|.|+|||.+..+++ ||||+.||+|+|+|.|+|+++..+.
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 999999999999999999999999999999999976 46799999999999988 9999999999999999999999854
Q ss_pred cChHHHHH
Q 000406 1542 LNGVYASL 1549 (1560)
Q Consensus 1542 ~~g~y~~l 1549 (1560)
++..-.++
T Consensus 228 ~~~R~~~F 235 (240)
T COG1126 228 KSERTRQF 235 (240)
T ss_pred CCHHHHHH
Confidence 33333333
No 106
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-46 Score=444.65 Aligned_cols=230 Identities=29% Similarity=0.433 Sum_probs=199.3
Q ss_pred CCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCEecC-
Q 000406 1308 RSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD-----PNQGKVMIEGVDLR- 1381 (1560)
Q Consensus 1308 ~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~-----p~~G~I~IdGvdi~- 1381 (1560)
|+..+.|+|+||+++|+.. ..++|+||||+|++||++||+|+||||||||+++|+|+++ |++|+|.|||+++.
T Consensus 75 ~~~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~ 153 (329)
T PRK14257 75 FNHANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRS 153 (329)
T ss_pred CCcCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccc
Confidence 5556679999999999643 3469999999999999999999999999999999999997 57999999999997
Q ss_pred -CCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1382 -EINVKWLRKQTALVGQEPALFAGTIRDNIALGNP--KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1382 -~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
.+++..+|+.++||||+|.+|++||+|||+++.. ..++++.++......++.+ .++.++++.+++.|.+||||||
T Consensus 154 ~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~--~L~~~l~~~~~~~~~~LSgGqk 231 (329)
T PRK14257 154 KKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSA--ALWDEVKDDLDKAGNALSGGQQ 231 (329)
T ss_pred cccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHc--CCcchhhhhhhCCcccCCHHHH
Confidence 4566788999999999999999999999997521 2344444433222222211 1445677889999999999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
|||||||||+++|+||||||||++||+.+.+.+++.|+++.+++|+|+|||+++++.. ||||+||++|+|+|.|+++++
T Consensus 232 qRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l 311 (329)
T PRK14257 232 QRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTI 311 (329)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999999889999999999999988 999999999999999999999
Q ss_pred Hhh
Q 000406 1538 LAS 1540 (1560)
Q Consensus 1538 l~~ 1540 (1560)
...
T Consensus 312 ~~~ 314 (329)
T PRK14257 312 FIH 314 (329)
T ss_pred hcC
Confidence 873
No 107
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-47 Score=420.82 Aligned_cols=221 Identities=36% Similarity=0.557 Sum_probs=191.4
Q ss_pred EEEEEEEEEcCCC--CCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccH---HHH
Q 000406 673 IEFKGVTFAYPSR--PETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQV---KWL 747 (1560)
Q Consensus 673 i~~~~vs~~y~~~--~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~---~~l 747 (1560)
|++++|++.|+.. +...+|+||||+|++||+.+|+|+||+|||||++++.++..|++|+|.+||.|+..++. ..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999852 23569999999999999999999999999999999999999999999999999987764 456
Q ss_pred hccEEEEecCCcCcc-ccHHHHHhcCCCCCC--HHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHH
Q 000406 748 RTQIGMVGQEPILFA-TSILENVLMGKENAT--MKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALAR 824 (1560)
Q Consensus 748 r~~i~~v~Q~~~lf~-~Tv~eNi~~g~~~~~--~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialAR 824 (1560)
|++||++||++.|++ .||.+||+|+.+-.. .+++. .+...+.++ .|+....+..+.+|||||||||+|||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~--~RV~elLel-----VgL~dk~~~yP~qLSGGQKQRVaIAR 154 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIK--QRVAELLEL-----VGLSDKADRYPAQLSGGQKQRVAIAR 154 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHH--HHHHHHHHH-----cCChhhhccCchhcCcchhhHHHHHH
Confidence 789999999999998 599999999865332 22322 122222222 26667778888999999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhhc
Q 000406 825 AMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLERG 900 (1560)
Q Consensus 825 Al~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~~ 900 (1560)
||+.+|+|||+|||||||||+|.+.|.+.|+++. -|-|+++|||.++.++. ||||.||++|+++|.|+..++...+
T Consensus 155 ALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~P 233 (339)
T COG1135 155 ALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFANP 233 (339)
T ss_pred HHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcCc
Confidence 9999999999999999999999999999998873 48999999999999988 9999999999999999999987643
No 108
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-46 Score=416.75 Aligned_cols=229 Identities=31% Similarity=0.504 Sum_probs=196.8
Q ss_pred EEEEEEEEEcCCC--CCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCC---HHHH
Q 000406 1314 IELKMVTFTYPSR--PEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREIN---VKWL 1388 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~--~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~---l~~L 1388 (1560)
|++++|++.|+.. ....+|+||||+|++||+.||+|+||||||||++++.++-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7999999999853 1246999999999999999999999999999999999999999999999999988886 5566
Q ss_pred hhceEEEcCCCCCCC-ccHHHHHhcCCC--CCCHHH----HHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000406 1389 RKQTALVGQEPALFA-GTIRDNIALGNP--KASWAE----IEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRI 1461 (1560)
Q Consensus 1389 R~~I~~VpQdp~LF~-gTIreNL~~g~~--~~sd~e----I~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRL 1461 (1560)
|++||+|+|++.|++ .||.+|+.|... ..+.+| +.+.|+.++|.|.-... ..+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~y-----------P~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRY-----------PAQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccC-----------chhcCcchhhHH
Confidence 889999999999997 799999998632 233443 45666666666555444 458999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHH
Q 000406 1462 AIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLL 1538 (1560)
Q Consensus 1462 aLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl 1538 (1560)
+|||||..+|+||+.|||||+|||+|.+.|.+.|++..+ |-|+++|||-++.+++ |||++||++|+|+|.|+-.++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 999999999999999999999999999999999987653 6799999999999988 9999999999999999999999
Q ss_pred hhccChHHHHHHHHh
Q 000406 1539 ASHLNGVYASLVRAE 1553 (1560)
Q Consensus 1539 ~~~~~g~y~~l~~~q 1553 (1560)
.+.+...=.+++.+.
T Consensus 231 ~~Pk~~~t~~fi~~~ 245 (339)
T COG1135 231 ANPKHAITQEFIGET 245 (339)
T ss_pred cCcchHHHHHHHHhh
Confidence 855455555665543
No 109
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.3e-46 Score=431.43 Aligned_cols=236 Identities=24% Similarity=0.426 Sum_probs=218.7
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhcc
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQ 750 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~ 750 (1560)
|.|+++|++++|+.. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++ ++|+|.+||.++..++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 469999999999642 3468999999999999999999999999999999999998 79999999999999998899999
Q ss_pred EEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCC
Q 000406 751 IGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDP 830 (1560)
Q Consensus 751 i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p 830 (1560)
|+||||+|.+|++|+++|+.+..+ .++++++++++.+++.+++..+|.++++.++++|.+||||||||++|||||+++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYGK-WSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhccC-CCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999974332 3567888999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhhcchHHHHHHH
Q 000406 831 RILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLERGGAYHDLVKL 909 (1560)
Q Consensus 831 ~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~~~~~~~l~~~ 909 (1560)
+||||||||++||+.+++.+++.|++..+++|+|+||||++++..||||++|++|++++.|+|+++++..+.|++++..
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~ 236 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISP 236 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhh
Confidence 9999999999999999999999999887799999999999999889999999999999999999999877777777653
No 110
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=6.4e-46 Score=433.73 Aligned_cols=200 Identities=27% Similarity=0.372 Sum_probs=166.2
Q ss_pred ccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhc
Q 000406 1312 LGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQ 1391 (1560)
Q Consensus 1312 ~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~ 1391 (1560)
.-|-++||+|.|++++ .++++++|-|..+++||+|||||+|||||++++.|.+.|+.|.|.-.-.. +
T Consensus 388 pvi~~~nv~F~y~~~~--~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~-----------~ 454 (614)
T KOG0927|consen 388 PVIMVQNVSFGYSDNP--MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHN-----------K 454 (614)
T ss_pred CeEEEeccccCCCCcc--hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccccc-----------c
Confidence 3599999999998653 69999999999999999999999999999999999999999988764221 2
Q ss_pred eEEEcC---CCCCCCccHHHHHhcCCCC-CCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHH
Q 000406 1392 TALVGQ---EPALFAGTIRDNIALGNPK-ASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAI 1467 (1560)
Q Consensus 1392 I~~VpQ---dp~LF~gTIreNL~~g~~~-~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARAL 1467 (1560)
+++.-| +...++-|.-|++..-.++ -..+++...+.+.++..... +.++. +||+|||.||++||.+
T Consensus 455 ~~~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q------~~p~~----~LS~Gqr~rVlFa~l~ 524 (614)
T KOG0927|consen 455 LPRYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQ------VVPMS----QLSDGQRRRVLFARLA 524 (614)
T ss_pred chhhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCcccc------ccchh----hcccccchhHHHHHHH
Confidence 222233 3345678888998876553 56688888888888874333 33343 7999999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEe-cCHHH
Q 000406 1468 LKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEY-GSHET 1536 (1560)
Q Consensus 1468 Lr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~-Gt~~e 1536 (1560)
+++|.||||||||++||.+|-..+.++|.+. ..+||+|||+...|.. +++|.+.+||.+... |....
T Consensus 525 ~kqP~lLlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~~G~i~~ 593 (614)
T KOG0927|consen 525 VKQPHLLLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKWDGDIEI 593 (614)
T ss_pred hcCCcEEEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeecCccHHH
Confidence 9999999999999999999999999999875 4689999999999988 999999999998875 55433
No 111
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-46 Score=393.76 Aligned_cols=219 Identities=32% Similarity=0.491 Sum_probs=197.3
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCc-----cEEEECCeecCC--cc
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTK-----GLITLDGHDLKS--LQ 743 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~-----G~I~i~g~~i~~--~~ 743 (1560)
..++++|+++.|+. ..+|+|||++|++++++|++|||||||||||+++.|+.+... |+|.++|++|.+ ++
T Consensus 6 ~~~~~~~l~~yYg~---~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYGD---KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEECc---hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 36899999999973 569999999999999999999999999999999999998765 999999999965 57
Q ss_pred HHHHhccEEEEecCCcCccccHHHHHhcCCCCC------CHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHH
Q 000406 744 VKWLRTQIGMVGQEPILFATSILENVLMGKENA------TMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQK 817 (1560)
Q Consensus 744 ~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQr 817 (1560)
...+|++||+|+|.|.-|+.||+|||.+|.... -++.+.++++.+.+|+-++. .+.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHH
Confidence 889999999999999999999999999984321 13446778889999887653 34567788999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 818 QRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 818 QRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
||+||||||.-+|+|||||||||||||.+...|.+.|.++.++.|||+|||.+..+.+ +|+..++-.|+++|.|+.+++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~i 235 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKI 235 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhh
Confidence 9999999999999999999999999999999999999999999999999999999876 999999999999999999988
Q ss_pred hhh
Q 000406 897 LER 899 (1560)
Q Consensus 897 ~~~ 899 (1560)
..+
T Consensus 236 F~~ 238 (253)
T COG1117 236 FTN 238 (253)
T ss_pred hcC
Confidence 754
No 112
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-46 Score=401.53 Aligned_cols=218 Identities=33% Similarity=0.535 Sum_probs=190.4
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+|+|||+.|. +..+++|+||+|++||+++++|||||||||++++|.|+++|++|+|++||+++++++...||++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 79999999997 356999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCcCccc-cHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCc--ccCCCCCCCChHHHHHHHHHHHhc
Q 000406 753 MVGQEPILFAT-SILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDT--QVGDRGTQLSGGQKQRIALARAMI 827 (1560)
Q Consensus 753 ~v~Q~~~lf~~-Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t--~~~~~g~~LSgGQrQRialARAl~ 827 (1560)
||-|...||+. ||.|||.+-..- .+.+++.+ .+.+.+..+ |++- ...+.+.+|||||+|||.+||||+
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~-----r~~ELl~lv--gL~p~~~~~RyP~eLSGGQQQRVGv~RALA 151 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKK-----RADELLDLV--GLDPSEYADRYPHELSGGQQQRVGVARALA 151 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHH-----HHHHHHHHh--CCCHHHHhhcCchhcCcchhhHHHHHHHHh
Confidence 99999999986 999999874321 12233222 122333332 5543 456778999999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhhc
Q 000406 828 KDPRILLLDEPTSALDSESESIVQQAIDKISV--GRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLERG 900 (1560)
Q Consensus 828 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~~ 900 (1560)
.+|+|||||||++||||.++..+++.+.++.+ ++|+|+||||++++.. +|||.+|++|+|+..++|++++.+.
T Consensus 152 adP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 152 ADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred cCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 99999999999999999999999999988743 8999999999998755 9999999999999999999998753
No 113
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.4e-44 Score=412.36 Aligned_cols=236 Identities=49% Similarity=0.776 Sum_probs=217.7
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 5789999999642 246999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCE
Q 000406 1394 LVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRV 1473 (1560)
Q Consensus 1394 ~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~I 1473 (1560)
|+||++.+|+.|++|||.++.+..+.+++.++++..++.+++..+|.|+++.....+.+||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999986554556677888888899999999999999999999999999999999999999999999
Q ss_pred EEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHhhccChHHHHHHHH
Q 000406 1474 LLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLASHLNGVYASLVRA 1552 (1560)
Q Consensus 1474 LILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~~l~~~ 1552 (1560)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++++ ..+.|..+++.
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~--~~~~~~~~~~~ 236 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLA--ENGLYAYLYQL 236 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHh--ccChHHHHHhc
Confidence 999999999999999999999999877899999999999998899999999999999999999997 46778877653
No 114
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-45 Score=385.27 Aligned_cols=219 Identities=31% Similarity=0.493 Sum_probs=198.0
Q ss_pred ccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCc-----cEEEECCEecCC--CC
Q 000406 1312 LGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQ-----GKVMIEGVDLRE--IN 1384 (1560)
Q Consensus 1312 ~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~-----G~I~IdGvdi~~--i~ 1384 (1560)
..++++||++-|. +..+|+|||++|++++.+|++|||||||||++++|.|+.+... |+|.++|.||-+ ++
T Consensus 6 ~~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 3589999999996 3469999999999999999999999999999999999999875 999999999976 47
Q ss_pred HHHHhhceEEEcCCCCCCCccHHHHHhcCCC------CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1385 VKWLRKQTALVGQEPALFAGTIRDNIALGNP------KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1385 l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~------~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
...||+++|+|+|.|.-|+.||.||+.+|-. ..-|+-++++|+.|.|++.+.. .| .+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD---rL----~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD---RL----HKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH---Hh----hCCccCCChhHH
Confidence 8899999999999999999999999999831 1224557899999999988754 23 356778999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
|||||||||.-+|+|||||||||+|||.+...|.+.|.++.++-|||+|||.+.-... +|+...+-.|+++|+|+-+++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~i 235 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKI 235 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhh
Confidence 9999999999999999999999999999999999999999989999999999998766 999999999999999999999
Q ss_pred Hhh
Q 000406 1538 LAS 1540 (1560)
Q Consensus 1538 l~~ 1540 (1560)
..+
T Consensus 236 F~~ 238 (253)
T COG1117 236 FTN 238 (253)
T ss_pred hcC
Confidence 864
No 115
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.2e-43 Score=451.88 Aligned_cols=198 Identities=24% Similarity=0.362 Sum_probs=167.1
Q ss_pred CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC--CccEEEECCEecCCCCHHHHhhceEEEcCCC-CCCCc
Q 000406 1328 EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP--NQGKVMIEGVDLREINVKWLRKQTALVGQEP-ALFAG 1404 (1560)
Q Consensus 1328 ~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p--~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp-~LF~g 1404 (1560)
.+..|+||+=-++||-.+|++|+||||||||+++|++-..- .+|+|+|||.+..+ +..++.+|||-|++ |+-.-
T Consensus 803 ~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~~ 879 (1391)
T KOG0065|consen 803 TRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPEL 879 (1391)
T ss_pred ceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCccc
Confidence 45699999999999999999999999999999999998542 47999999998755 78999999999987 56667
Q ss_pred cHHHHHhcCC-----CCCCHHH----HHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCC-CEE
Q 000406 1405 TIRDNIALGN-----PKASWAE----IEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGS-RVL 1474 (1560)
Q Consensus 1405 TIreNL~~g~-----~~~sd~e----I~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p-~IL 1474 (1560)
||||-|.+.. .+.+++| ++++.+..+++++ -|..||..|..||..||.||.||=-|+.|| .||
T Consensus 880 TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~-------~daiVG~~G~GLs~eQRKrLTIgVELvA~P~~il 952 (1391)
T KOG0065|consen 880 TVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEY-------ADALVGLPGSGLSTEQRKRLTIGVELVANPSSIL 952 (1391)
T ss_pred chHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhh-------hhhhccCCCCCCCHHHhceeeEEEEEecCCceeE
Confidence 9999998641 2344433 4455555544433 456789989999999999999999999999 899
Q ss_pred EEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHH--hhcCEEEEEe-CCEEEEecCHH
Q 000406 1475 LLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTI--REANMIAVVR-DGAVVEYGSHE 1535 (1560)
Q Consensus 1475 ILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti--~~aDrIlVLd-~G~IvE~Gt~~ 1535 (1560)
+||||||+||+++...|.+.+|++. .|+||+..-|.++.. +..|+++.|+ .|+.|-+|+..
T Consensus 953 FLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG 1017 (1391)
T KOG0065|consen 953 FLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLG 1017 (1391)
T ss_pred EecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCcc
Confidence 9999999999999999999999875 689999999999863 5699999997 68999998753
No 116
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=6.7e-44 Score=411.31 Aligned_cols=240 Identities=34% Similarity=0.530 Sum_probs=221.4
Q ss_pred CccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhh
Q 000406 1311 PLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRK 1390 (1560)
Q Consensus 1311 ~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~ 1390 (1560)
.+.|+++||+++|+.. ...+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+
T Consensus 17 ~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 17 GGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 3569999999999642 246999999999999999999999999999999999999999999999999999999889999
Q ss_pred ceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccC
Q 000406 1391 QTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKG 1470 (1560)
Q Consensus 1391 ~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~ 1470 (1560)
.++|++|+|.+|++|+++|+.+.. ....++++++++.+++.+++..+|.|+++.+++.+.+||+|||||++|||||+++
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~ 174 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPEC-KCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRK 174 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCC-CCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999998643 2345678889999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHhhccChHHHHHH
Q 000406 1471 SRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLASHLNGVYASLV 1550 (1560)
Q Consensus 1471 p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~~l~ 1550 (1560)
|++|||||||++||+.+++.+.+.|++..+++|+|++||+++.+..||||++|++|+|++.|+++++++ ..++.|..++
T Consensus 175 p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~-~~~~~~~~~~ 253 (257)
T cd03288 175 SSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLA-QEDGVFASLV 253 (257)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHh-ccchHHHHHH
Confidence 999999999999999999999999998777899999999999999999999999999999999999987 3577888887
Q ss_pred HHh
Q 000406 1551 RAE 1553 (1560)
Q Consensus 1551 ~~q 1553 (1560)
..+
T Consensus 254 ~~~ 256 (257)
T cd03288 254 RTD 256 (257)
T ss_pred hcc
Confidence 654
No 117
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-44 Score=388.86 Aligned_cols=217 Identities=31% Similarity=0.539 Sum_probs=192.2
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+|+|||++|. +..+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.|+++++...||++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 79999999996 346999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCCCC-ccHHHHHhcCCCC---CC----HHHHHHHHHHHhHH--HHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000406 1394 LVGQEPALFA-GTIRDNIALGNPK---AS----WAEIEEAAEEAYIH--KFISSLPQGYETQVGESGVQLSGGQKQRIAI 1463 (1560)
Q Consensus 1394 ~VpQdp~LF~-gTIreNL~~g~~~---~s----d~eI~~al~~a~l~--~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaL 1463 (1560)
||-|..-||+ .||.|||..- |. -+ ++++.+.++.++|. +|....| ..|||||+||+.+
T Consensus 79 YviQqigLFPh~Tv~eNIa~V-P~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP-----------~eLSGGQQQRVGv 146 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATV-PKLLGWDKERIKKRADELLDLVGLDPSEYADRYP-----------HELSGGQQQRVGV 146 (309)
T ss_pred hhhhhcccCCCccHHHHHHhh-hhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCc-----------hhcCcchhhHHHH
Confidence 9999999996 5999999863 21 22 34456667777774 3555555 4799999999999
Q ss_pred HHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHH-hhcCEEEEEeCCEEEEecCHHHHHhh
Q 000406 1464 ARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTI-REANMIAVVRDGAVVEYGSHETLLAS 1540 (1560)
Q Consensus 1464 ARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti-~~aDrIlVLd~G~IvE~Gt~~eLl~~ 1540 (1560)
||||..+|+||+||||.++||+.|...+|+-+.++.+ ++|+|+|||+++.. +-+|||.||++|+|+.+|+|++++++
T Consensus 147 ~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~ 226 (309)
T COG1125 147 ARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILAN 226 (309)
T ss_pred HHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999987654 68999999999986 55999999999999999999999985
Q ss_pred ccChHH
Q 000406 1541 HLNGVY 1546 (1560)
Q Consensus 1541 ~~~g~y 1546 (1560)
....|
T Consensus 227 -Pan~F 231 (309)
T COG1125 227 -PANDF 231 (309)
T ss_pred -ccHHH
Confidence 44444
No 118
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-44 Score=423.58 Aligned_cols=224 Identities=32% Similarity=0.495 Sum_probs=194.0
Q ss_pred CCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC-----CCccEEEECCeecC--
Q 000406 668 SVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD-----PTKGLITLDGHDLK-- 740 (1560)
Q Consensus 668 ~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~-----~~~G~I~i~g~~i~-- 740 (1560)
+..+.|+++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||+++.
T Consensus 76 ~~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~ 154 (329)
T PRK14257 76 NHANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSK 154 (329)
T ss_pred CcCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccc
Confidence 455789999999999642 3469999999999999999999999999999999999996 57999999999997
Q ss_pred CccHHHHhccEEEEecCCcCccccHHHHHhcCCCC--CCHHHH-----HHHHHHhhhHHHHHhCCCCCCcccCCCCCCCC
Q 000406 741 SLQVKWLRTQIGMVGQEPILFATSILENVLMGKEN--ATMKEA-----VAACKAASAHSFISELPLGYDTQVGDRGTQLS 813 (1560)
Q Consensus 741 ~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~--~~~~~~-----~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LS 813 (1560)
..+...+|++++||||+|++|++||+|||.++... .++++. ..+++.++ ++.++++.+++++.+||
T Consensus 155 ~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~-------L~~~l~~~~~~~~~~LS 227 (329)
T PRK14257 155 KISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAA-------LWDEVKDDLDKAGNALS 227 (329)
T ss_pred ccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcC-------CcchhhhhhhCCcccCC
Confidence 34556788999999999999999999999976421 222332 22233333 33456678899999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecC
Q 000406 814 GGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGN 892 (1560)
Q Consensus 814 gGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~ 892 (1560)
|||||||||||||+++|+||||||||++||+++...++++|+++.+++|+|+|||+++++.. ||||+||++|+|++.|+
T Consensus 228 gGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~ 307 (329)
T PRK14257 228 GGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGE 307 (329)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999998888999999999999987 99999999999999999
Q ss_pred hhhHhhh
Q 000406 893 HRQLLER 899 (1560)
Q Consensus 893 ~~~l~~~ 899 (1560)
++++...
T Consensus 308 ~~~l~~~ 314 (329)
T PRK14257 308 TKTIFIH 314 (329)
T ss_pred HHHHhcC
Confidence 9998753
No 119
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-43 Score=399.63 Aligned_cols=233 Identities=55% Similarity=0.846 Sum_probs=213.9
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++|++++|++. ..++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 5789999999643 235999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCE
Q 000406 1394 LVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRV 1473 (1560)
Q Consensus 1394 ~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~I 1473 (1560)
|+||++.+|+.|++||+.++......+++.+.++..++.+++..+|.|+++.++.....||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987555556777788888899999999999999999999999999999999999999999999
Q ss_pred EEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHhhccChHHHHH
Q 000406 1474 LLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLASHLNGVYASL 1549 (1560)
Q Consensus 1474 LILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~~l 1549 (1560)
|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++.+ ..+.|..+
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~--~~~~~~~~ 233 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLA--QGGVYAKL 233 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHH--cCcchhhh
Confidence 999999999999999999999999878899999999999998899999999999999999999987 35555543
No 120
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.5e-43 Score=399.11 Aligned_cols=235 Identities=52% Similarity=0.791 Sum_probs=217.4
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++|++++|+.. ..+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDPG--RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCCC--CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 5789999999632 35999999999999999999999999999999999999999999999999999988888999999
Q ss_pred EEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCE
Q 000406 1394 LVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRV 1473 (1560)
Q Consensus 1394 ~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~I 1473 (1560)
|+||++.+|++|++||+.++....+++++.++++.+++.+.+..+|.|+++.+.....+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655667778888888999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHhhccChHHHHHHHH
Q 000406 1474 LLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLASHLNGVYASLVRA 1552 (1560)
Q Consensus 1474 LILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~~l~~~ 1552 (1560)
|||||||++||+.+...+.+.|++..++.|+|++||+++.+..||++++|++|++++.|+++++.+ +.+.|..++..
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~--~~~~~~~~~~~ 235 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLA--KGGLYAEMWKA 235 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh--cccHHHHHHhc
Confidence 999999999999999999999998766889999999999998899999999999999999999987 46777776654
No 121
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=4.4e-43 Score=400.16 Aligned_cols=234 Identities=50% Similarity=0.812 Sum_probs=211.7
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++|++++|+.. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 5789999999642 246899999999999999999999999999999999999999999999999998777777888999
Q ss_pred EEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCCCE
Q 000406 753 MVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRI 832 (1560)
Q Consensus 753 ~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~i 832 (1560)
|++|++.+|+.||+||+.++.......++.+.++..++.+++..+|.|+++..+..+.+||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999989999999986543345556666777788889999999999988889999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhhcchHHHHH
Q 000406 833 LLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLERGGAYHDLV 907 (1560)
Q Consensus 833 llLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~~~~~~~l~ 907 (1560)
|||||||++||+.+...+.+.|+++.+|+|+|++||+++.+..||+|++|++|++++.|++++++.+.+.|..++
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~~ 234 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAYLY 234 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHHHH
Confidence 999999999999999999999998877899999999999997799999999999999999999987777776654
No 122
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=6.6e-43 Score=398.94 Aligned_cols=236 Identities=61% Similarity=0.974 Sum_probs=214.0
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++|++++|+...+.++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 57899999997532346999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCE
Q 000406 1394 LVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRV 1473 (1560)
Q Consensus 1394 ~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~I 1473 (1560)
|+||++.+|+.|++||+.++......+++.+.++..++.+++..+|.|+++.+.....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999986554556677788888899999999999999999998999999999999999999999999
Q ss_pred EEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHhhccChHHHHHHH
Q 000406 1474 LLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLASHLNGVYASLVR 1551 (1560)
Q Consensus 1474 LILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~~l~~ 1551 (1560)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+.+++.+ ..+.+..++.
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~--~~~~~~~~~~ 236 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMA--QKGVYAKLVK 236 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhh--cChhHHHHhh
Confidence 999999999999999999999998777899999999999998999999999999999999999886 3454555543
No 123
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-40 Score=374.52 Aligned_cols=473 Identities=17% Similarity=0.205 Sum_probs=352.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchhhccCCChhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 396 LLMTVLAAIVMMGAYLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFA 475 (1560)
Q Consensus 396 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lr~~l~~~ll~~~l~ffd~~~~~G~i~~r~s~Dv~~i~~~l~~~l~~~i 475 (1560)
..++++..+.++.+.+.......+++....++|.++.++++..|+.-++. ..++.++.++.+|+..|. +-...++.+.
T Consensus 52 ~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier-~~~~rlla~L~~Dvr~IS-f~~s~lp~~~ 129 (546)
T COG4615 52 PEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIER-LGSARLLAGLTSDVRNIS-FAFSRLPELV 129 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH-hcccchhhhhccccccee-ehHhhhHHHH
Confidence 33444444555555566667778899999999999999999999999974 488999999999999998 4455677789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcch--HH
Q 000406 476 HNIFTFICGYTVGFLRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAE--DH 553 (1560)
Q Consensus 476 ~~i~~~i~~~ii~~~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e--~~ 553 (1560)
+.+..++++.+..+++|+.+.++.++.+.+.++...+...+..+..+...+...+..+..+..++|.+.++...-- ..
T Consensus 130 qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~ 209 (546)
T COG4615 130 QAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYV 209 (546)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHH
Confidence 9999999999999999999988777777777777776666666667777777888889999999999998876532 12
Q ss_pred HHHHHHHHHHhHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 554 FAVRYAGLLADSIPFGAKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYF 633 (1560)
Q Consensus 554 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~ 633 (1560)
+.+.|...-+...+.......+......+.+++.+.+..+++|+....... +...+.++...++....|+.+.+..+
T Consensus 210 h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~w~---st~~a~tivlvlLflr~pL~s~vgil 286 (546)
T COG4615 210 HNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLGWA---STNVAATIVLVLLFLRTPLLSAVGIL 286 (546)
T ss_pred HhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc---hhhHHHHHHHHHHHHhhHHHHHHhhh
Confidence 222222211111121111122222333445566666666777776554332 22234444445556677899999999
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCC
Q 000406 634 AQFAQGTVAATRVFEIIDRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGG 713 (1560)
Q Consensus 634 ~~~~~a~~a~~Ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsG 713 (1560)
+.+.+|.+|+++|.++-..++. ..... ....| .-..||++||.|+|+.. ..-+..||++|++||+|-|+|.||||
T Consensus 287 P~l~~AqvA~~kiakle~~~~~-a~~~~-~q~~p-~~~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGsG 361 (546)
T COG4615 287 PTLLTAQVAFNKIAKLELAPYK-ADFPR-PQAFP-DWKTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGSG 361 (546)
T ss_pred hHHHHHHHHHHHHHHhhcCCcc-ccCCC-CCcCC-cccceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCCCc
Confidence 9999999999999997653222 11111 11111 23469999999999742 24578899999999999999999999
Q ss_pred hHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCC-CCHHHHHHHHHHhhhHH
Q 000406 714 KSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKEN-ATMKEAVAACKAASAHS 792 (1560)
Q Consensus 714 KSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~-~~~~~~~~~~~~~~~~~ 792 (1560)
|||++++|.|+|+|++|+|++||.++..-++++.|+-++-|+-|.+||+.++ |.+. .+.+.+...++...+..
T Consensus 362 KST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLel~~ 435 (546)
T COG4615 362 KSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLELAH 435 (546)
T ss_pred HHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999998654 3222 45555555554443322
Q ss_pred HHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHh--cCCcEEEEEecCc
Q 000406 793 FISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKI--SVGRTTIVIAHRL 870 (1560)
Q Consensus 793 ~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~~~tvi~itH~l 870 (1560)
..+ +.+|-- ....||-|||.|+|+--|++-+.+|++|||=-+--||.-++.+.+.+.-. ..||||+.||||-
T Consensus 436 kts-l~d~~f-----s~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd 509 (546)
T COG4615 436 KTS-LNDGRF-----SNLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDD 509 (546)
T ss_pred hhc-ccCCcc-----cccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCc
Confidence 221 111110 12479999999999999999999999999999999999999888876544 3599999999999
Q ss_pred cccccCCEEEEEeCCeEEEe
Q 000406 871 ATVKNANTIVVLDQGSVVEI 890 (1560)
Q Consensus 871 ~~i~~~D~i~vl~~G~iv~~ 890 (1560)
.....|||++.|++|+++|.
T Consensus 510 ~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 510 HYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred hhhhhHHHHHHHhcCceeec
Confidence 99999999999999999985
No 124
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=7.6e-43 Score=393.93 Aligned_cols=219 Identities=38% Similarity=0.622 Sum_probs=206.1
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++|++++|+.. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.+
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 2 DIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred cEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 58999999999743 24699999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCC
Q 000406 1393 ALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSR 1472 (1560)
Q Consensus 1393 ~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ 1472 (1560)
+|+||++.+|++|++|||.+.. ....+++.++++..++.+++..+|.|+++.++..+.+||+|||||++|||||+++|+
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~-~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~ 159 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFG-EYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSK 159 (221)
T ss_pred EEECCCCccccchHHHHhCcCC-CCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999998754 356778999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecC
Q 000406 1473 VLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGS 1533 (1560)
Q Consensus 1473 ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt 1533 (1560)
+|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 160 ILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 9999999999999999999999998877889999999999999999999999999999886
No 125
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.2e-43 Score=396.05 Aligned_cols=214 Identities=30% Similarity=0.503 Sum_probs=188.0
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.++++|++|+|++ +++|+|+||+|++||+++|+||||||||||+|+|+|+++|.+|+|.+||+++.+++.+++.+++
T Consensus 2 ~L~~~~ls~~y~~---~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYGG---KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEECC---eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 4789999999973 5699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCcC-ccccHHHHHhcCCCCC-------C--H-HHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHH
Q 000406 752 GMVGQEPIL-FATSILENVLMGKENA-------T--M-KEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRI 820 (1560)
Q Consensus 752 ~~v~Q~~~l-f~~Tv~eNi~~g~~~~-------~--~-~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRi 820 (1560)
+||||++.. +.-||+|-+.+|+... + + +.+.++++..++. ....+...+||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~-----------~la~r~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLE-----------HLADRPVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcH-----------HHhcCcccccChhHHHHH
Confidence 999999754 4559999999986321 1 2 2344455555443 344555678999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCccccc-cCCEEEEEeCCeEEEecChhhHh
Q 000406 821 ALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVK-NANTIVVLDQGSVVEIGNHRQLL 897 (1560)
Q Consensus 821 alARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~-~~D~i~vl~~G~iv~~G~~~~l~ 897 (1560)
.|||||+++|+|||||||||+||...+..+++.++++. +|+|+|+|.||++.+. .||++++|++|+++..|+|++++
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999884 4899999999999875 59999999999999999999988
Q ss_pred hh
Q 000406 898 ER 899 (1560)
Q Consensus 898 ~~ 899 (1560)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 64
No 126
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.9e-43 Score=377.96 Aligned_cols=222 Identities=33% Similarity=0.541 Sum_probs=190.8
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHH---HH
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVK---WL 747 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~---~l 747 (1560)
..|++++|+++|++ +.||+||||+|++||+++|+|+||||||||+++|.|+..|++|+|.++|.++..++.+ .+
T Consensus 7 ~~I~vr~v~~~fG~---~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 7 PLIEVRGVTKSFGD---RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred ceEEEeeeeeecCC---EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 36999999999974 5699999999999999999999999999999999999999999999999999888754 57
Q ss_pred hccEEEEecCCcCccc-cHHHHHhcCCCCC---CHHHHHHHHHHhhhHHHHHhCCCCCCcc-cCCCCCCCChHHHHHHHH
Q 000406 748 RTQIGMVGQEPILFAT-SILENVLMGKENA---TMKEAVAACKAASAHSFISELPLGYDTQ-VGDRGTQLSGGQKQRIAL 822 (1560)
Q Consensus 748 r~~i~~v~Q~~~lf~~-Tv~eNi~~g~~~~---~~~~~~~~~~~~~~~~~i~~l~~gl~t~-~~~~g~~LSgGQrQRial 822 (1560)
|+++|+++|...||.. ||+||+.|...+. ..+.+.+.+ ... ++. .|+... ....+.+||||++.|+||
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv-~~K----L~~--VGL~~~~~~~~PsELSGGM~KRvaL 156 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELV-LMK----LEL--VGLRGAAADLYPSELSGGMRKRVAL 156 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHH-HHH----HHh--cCCChhhhhhCchhhcchHHHHHHH
Confidence 8999999999999987 9999999965332 233332211 111 221 366555 345678999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 823 ARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISV--GRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 823 ARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
|||+..+|+|+++|||||+|||.+...+.+.|+++.+ |.|+|+|||+++++.. ||||++|.+|+|+..|+++|+.+.
T Consensus 157 ARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~s 236 (263)
T COG1127 157 ARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLAS 236 (263)
T ss_pred HHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999998853 8999999999999977 899999999999999999999876
Q ss_pred cch
Q 000406 900 GGA 902 (1560)
Q Consensus 900 ~~~ 902 (1560)
+..
T Consensus 237 d~P 239 (263)
T COG1127 237 DDP 239 (263)
T ss_pred CCH
Confidence 543
No 127
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-42 Score=393.78 Aligned_cols=225 Identities=49% Similarity=0.797 Sum_probs=211.0
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++|++++|+. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|.+|+|.++|.++...+...+|+.+
T Consensus 2 ~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 2 EIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred eEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 5899999999963 23599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCC
Q 000406 1393 ALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSR 1472 (1560)
Q Consensus 1393 ~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ 1472 (1560)
+|+||++.+|++|++||+.++.+....+++.++++..++.+++..+|.|+++.++.....||||||||++|||||+++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998765556678888899999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000406 1473 VLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1473 ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
+|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++++.|+.+++++
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 226 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLA 226 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHh
Confidence 9999999999999999999999998877899999999999998899999999999999999998876
No 128
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=5.8e-43 Score=415.04 Aligned_cols=228 Identities=28% Similarity=0.462 Sum_probs=193.3
Q ss_pred EEEEEEEEEcCCCC-CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHH---Hh
Q 000406 1314 IELKMVTFTYPSRP-EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKW---LR 1389 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~-~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~---LR 1389 (1560)
|+++||+++|+.+. ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996422 246999999999999999999999999999999999999999999999999999887654 57
Q ss_pred hceEEEcCCCCCCC-ccHHHHHhcCC--CCCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 000406 1390 KQTALVGQEPALFA-GTIRDNIALGN--PKASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIA 1462 (1560)
Q Consensus 1390 ~~I~~VpQdp~LF~-gTIreNL~~g~--~~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLa 1462 (1560)
++|+||||++.+|. .|++||+.++. ...+. +++.++++.+++.++... ....||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~-----------~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDS-----------YPSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHHHH
Confidence 89999999999995 79999998742 12222 335566666666554433 33579999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1463 IARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1463 LARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|||||+.+|+|||||||||+||+.+...|.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+|+|.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999998754 6899999999999976 99999999999999999999987
Q ss_pred hccChHHHHHHHH
Q 000406 1540 SHLNGVYASLVRA 1552 (1560)
Q Consensus 1540 ~~~~g~y~~l~~~ 1552 (1560)
+.++....+++..
T Consensus 231 ~p~~~~~~~~~~~ 243 (343)
T TIGR02314 231 HPKTPLAQKFIRS 243 (343)
T ss_pred CCCcHHHHHHHhh
Confidence 4334445555543
No 129
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.3e-43 Score=405.08 Aligned_cols=213 Identities=35% Similarity=0.568 Sum_probs=188.1
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++||+++|++. .+|+||||+|+.||+++|+|||||||||||++|+|+.+|++|+|.|+|.++++++++. +.|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999742 2899999999999999999999999999999999999999999999999999998876 689
Q ss_pred EEEecCCcCccc-cHHHHHhcCCCCC--C----HHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHH
Q 000406 752 GMVGQEPILFAT-SILENVLMGKENA--T----MKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALAR 824 (1560)
Q Consensus 752 ~~v~Q~~~lf~~-Tv~eNi~~g~~~~--~----~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialAR 824 (1560)
++|||+..||+. ||+|||.|+.... . ++++.++++.. +++..+.+.+.+|||||||||||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L-----------~l~~lL~r~P~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLL-----------GLEHLLNRKPLQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHc-----------CChhHHhcCcccCChhhHHHHHHHH
Confidence 999999999986 9999999997532 2 23333344333 5566667778899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhhc
Q 000406 825 AMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLERG 900 (1560)
Q Consensus 825 Al~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~~ 900 (1560)
||+++|+++|||||+|+||++.+..+...|+++. -+.|+|+||||..++.. +|||+||++|+|.+.|+|.|+..+.
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 9999999999999999999999999988888874 37899999999998875 9999999999999999999998653
No 130
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.4e-42 Score=380.23 Aligned_cols=209 Identities=35% Similarity=0.541 Sum_probs=173.6
Q ss_pred EEEEEEEEEcCCCC-CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHH---HH-
Q 000406 673 IEFKGVTFAYPSRP-ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVK---WL- 747 (1560)
Q Consensus 673 i~~~~vs~~y~~~~-~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~---~l- 747 (1560)
++++||++.|.... ...+|++|||+|++||+++|+|||||||||||++|.|+..|++|.|.++|+|+..++.+ .+
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67999999997432 24689999999999999999999999999999999999999999999999999988743 33
Q ss_pred hccEEEEecCCcCccc-cHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccC-CCCCCCChHHHHHHHHH
Q 000406 748 RTQIGMVGQEPILFAT-SILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVG-DRGTQLSGGQKQRIALA 823 (1560)
Q Consensus 748 r~~i~~v~Q~~~lf~~-Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~-~~g~~LSgGQrQRialA 823 (1560)
|++||||+|+..|++. |++|||.++... ....+..++ ..+.++.+ |+..... ..+.+||||||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~-----~~~l~~~l--gl~~~~~~~~p~eLSGGqqQRVAIA 154 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRA-----AEELLEVL--GLEDRLLKKKPSELSGGQQQRVAIA 154 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHH-----HHHHHHhc--CChhhhccCCchhcCHHHHHHHHHH
Confidence 4579999999999986 999999964211 111111111 11223332 5553444 66889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHh--cCCcEEEEEecCccccccCCEEEEEeCCeEE
Q 000406 824 RAMIKDPRILLLDEPTSALDSESESIVQQAIDKI--SVGRTTIVIAHRLATVKNANTIVVLDQGSVV 888 (1560)
Q Consensus 824 RAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv 888 (1560)
|||+.+|+|+|.||||++||.++.+.|++.++++ ..|+|+|+|||+...+..|||++.|++|++.
T Consensus 155 RAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 155 RALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 9999999999999999999999999999999988 3489999999999999999999999999954
No 131
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.2e-42 Score=388.00 Aligned_cols=213 Identities=33% Similarity=0.542 Sum_probs=191.4
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.++++||+|+|.+ +++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|++||.++.+++.+++-+++
T Consensus 2 ~L~~~~ls~~y~~---~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYGG---KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEECC---eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 3789999999963 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCC-CCCCccHHHHHhcCC-C--------C-CCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000406 1393 ALVGQEP-ALFAGTIRDNIALGN-P--------K-ASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRI 1461 (1560)
Q Consensus 1393 ~~VpQdp-~LF~gTIreNL~~g~-~--------~-~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRL 1461 (1560)
+||||.+ .-|.-||+|=+.+|+ | . .+.+.+.+|++..++.++..+. + ..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~-------~----~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRP-------V----DELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCc-------c----cccChhHHHHH
Confidence 9999997 456779999998884 2 1 1233578889999998876442 2 35999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHH-hhcCEEEEEeCCEEEEecCHHHHH
Q 000406 1462 AIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTI-REANMIAVVRDGAVVEYGSHETLL 1538 (1560)
Q Consensus 1462 aLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti-~~aDrIlVLd~G~IvE~Gt~~eLl 1538 (1560)
.|||||.++|+||+||||||+||....-.|++.++++. +++|+|+|.|+++.. +.||++++|++|+|+..|+|+|.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999876 368999999999876 559999999999999999999998
Q ss_pred h
Q 000406 1539 A 1539 (1560)
Q Consensus 1539 ~ 1539 (1560)
.
T Consensus 228 T 228 (258)
T COG1120 228 T 228 (258)
T ss_pred C
Confidence 6
No 132
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-42 Score=380.11 Aligned_cols=202 Identities=33% Similarity=0.521 Sum_probs=172.0
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.+++++|+++|+. ..+|+||||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|.+++.- ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4889999999974 5699999999999999999999999999999999999999999999999988433 3479
Q ss_pred EEEecCCcCcc-ccHHHHHhcCCCCCC--HHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhcc
Q 000406 752 GMVGQEPILFA-TSILENVLMGKENAT--MKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIK 828 (1560)
Q Consensus 752 ~~v~Q~~~lf~-~Tv~eNi~~g~~~~~--~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~ 828 (1560)
+||+|++.||+ .||+||+.++..... .++..+ .+.+.++.. |+...-+..+.+||||||||+||||||+.
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~-----~a~~~L~~V--gL~~~~~~~P~qLSGGMrQRVaiARAL~~ 147 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARE-----RAKELLELV--GLAGFEDKYPHQLSGGMRQRVAIARALAT 147 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHH-----HHHHHHHHc--CCcchhhcCccccChHHHHHHHHHHHHhc
Confidence 99999999998 599999999876432 221111 222334443 66666677788999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHh--cCCcEEEEEecCcccccc-CCEEEEEeC--CeEE
Q 000406 829 DPRILLLDEPTSALDSESESIVQQAIDKI--SVGRTTIVIAHRLATVKN-ANTIVVLDQ--GSVV 888 (1560)
Q Consensus 829 ~p~illLDEpts~LD~~~~~~i~~~l~~~--~~~~tvi~itH~l~~i~~-~D~i~vl~~--G~iv 888 (1560)
+|+|||||||++|||+.|+..+++.+.++ ..++||++|||+++++-. +|||+||.+ |+|.
T Consensus 148 ~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 148 RPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred CCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 99999999999999999999999999887 347999999999999765 999999998 5553
No 133
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-42 Score=390.71 Aligned_cols=231 Identities=54% Similarity=0.885 Sum_probs=208.4
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++|++++|++. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 5789999999743 235899999999999999999999999999999999999999999999999988777777888999
Q ss_pred EEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCCCE
Q 000406 753 MVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRI 832 (1560)
Q Consensus 753 ~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~i 832 (1560)
|++|++.+|+.|++||+.++.......++.+.++..++.++++.+|.|+++..+..+.+||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987654444555666677788899999998999999988999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhhcchHH
Q 000406 833 LLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLERGGAYH 904 (1560)
Q Consensus 833 llLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~~~~~~ 904 (1560)
|||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||+|++|++|++++.|+++++....+.|+
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~ 231 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQGGVYA 231 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcCcchh
Confidence 999999999999999999999998877899999999999998899999999999999999998876655443
No 134
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-43 Score=407.12 Aligned_cols=214 Identities=31% Similarity=0.528 Sum_probs=187.8
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhcc
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQ 750 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~ 750 (1560)
..|+++||+++|+ +..+|+||||+|++||+++|+|||||||||||++|+|+.+|++|+|.++|+++.++++.. +.
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~k--R~ 78 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEK--RP 78 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhh--cc
Confidence 3699999999997 357999999999999999999999999999999999999999999999999999988764 68
Q ss_pred EEEEecCCcCccc-cHHHHHhcCCCC---CCHH----HHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHH
Q 000406 751 IGMVGQEPILFAT-SILENVLMGKEN---ATMK----EAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIAL 822 (1560)
Q Consensus 751 i~~v~Q~~~lf~~-Tv~eNi~~g~~~---~~~~----~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRial 822 (1560)
|++|+|+..||+. ||+|||.||... ...+ ++.++++.+ |+...-.+.+.+|||||||||||
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV-----------~L~~~~~R~p~qLSGGQqQRVAL 147 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELV-----------GLEGFADRKPHQLSGGQQQRVAL 147 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHc-----------CchhhhhhChhhhChHHHHHHHH
Confidence 9999999999986 999999999761 1122 333444444 44445567778999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 823 ARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 823 ARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
||||..+|++||||||.|+||.+-+..++..++++. .|.|.|+||||-++... +|||+||++|+|...|+|+|+..+
T Consensus 148 ARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 148 ARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred HHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 999999999999999999999999999999888773 48999999999998754 999999999999999999999875
Q ss_pred c
Q 000406 900 G 900 (1560)
Q Consensus 900 ~ 900 (1560)
.
T Consensus 228 P 228 (352)
T COG3842 228 P 228 (352)
T ss_pred c
Confidence 3
No 135
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=8e-42 Score=385.35 Aligned_cols=219 Identities=40% Similarity=0.694 Sum_probs=202.3
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+...+|+.+
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 2 RIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred eEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 48999999999642 24699999999999999999999999999999999999999999999999999888877788999
Q ss_pred EEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCC
Q 000406 1393 ALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSR 1472 (1560)
Q Consensus 1393 ~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ 1472 (1560)
+|+||++.+|..|++||+.++.+..+.+++.++++..++.+.+..+|.|++|.+.....+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999988654445667888899999999999999999999998889999999999999999999999
Q ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEec
Q 000406 1473 VLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYG 1532 (1560)
Q Consensus 1473 ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~G 1532 (1560)
+|||||||++||+.+...+.+.|++..+++|+|+|||+++.+..||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999886668999999999988779999999999998765
No 136
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=8.1e-39 Score=390.26 Aligned_cols=472 Identities=17% Similarity=0.132 Sum_probs=346.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCccccc---CChHHHHHHHhhhHHHHHHHHHH
Q 000406 1036 LSLALVGLGFGCIIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEE---NSTGVLVSRLSIDSISFRSVLGD 1112 (1560)
Q Consensus 1036 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~---~~~G~il~R~s~Di~~i~~~l~~ 1112 (1560)
.+.++.++..+...+...+.++......+.-..|-+.+..+-+.....|+-... ...=..=.|+..|+..+-+.-..
T Consensus 88 ~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~ 167 (604)
T COG4178 88 QLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLD 167 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHH
Confidence 344555555556666666777777777777777888888888877744332111 00112346888888877666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHH-HHhcchhhhhhhHHHHHHH
Q 000406 1113 RFSVLLMGLSSAAVGLGVSLVLN---------------WRLTLVAAALTPFTLGASYLSL-IINVGPKIDNSSYAKASSI 1176 (1560)
Q Consensus 1113 ~l~~~l~~~~~~i~~l~~~~~~~---------------~~l~lv~l~~ipl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 1176 (1560)
....++.++++.+...+++.-++ ..+.+++++.+++...+.++.. ...+....+.+..+.....
T Consensus 168 l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~ 247 (604)
T COG4178 168 LSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYS 247 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHH
Confidence 66666666666665555554222 1222222222222222211111 1111111222333444455
Q ss_pred HHHHhcchhHHHhccchHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHH
Q 000406 1177 ASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYK 1256 (1560)
Q Consensus 1177 ~~e~l~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~ 1256 (1560)
+...-++.+.|..++-|+...++.++..+.......+...+......+.....++..++-+.+++-..+.|++++|.++.
T Consensus 248 Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmq 327 (604)
T COG4178 248 LVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQ 327 (604)
T ss_pred HHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHH
Confidence 66667888999999999999888888887777766666666655666666666666777777888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccC------CccccccccccC--CCCCccEEEEEEEEEcCCCCC
Q 000406 1257 IFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRK------PLIDNVKGRKLE--RSKPLGIELKMVTFTYPSRPE 1328 (1560)
Q Consensus 1257 ~~~~~~~~~~~i~~l~~~~~~~~~~~~s~~ri~~i~~~~------~~~~~~~~~~~~--~~~~~~I~~~nVsf~Y~~~~~ 1328 (1560)
....+......++.+...+..+..-.+.+.|+.++.+.- ++.......... ......|+|+||+..-|++
T Consensus 328 a~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~-- 405 (604)
T COG4178 328 AVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG-- 405 (604)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC--
Confidence 999999999999999999999999999999998886322 111111111110 1114579999999998864
Q ss_pred ccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceEEEcCCCCCCCccHHH
Q 000406 1329 VTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEPALFAGTIRD 1408 (1560)
Q Consensus 1329 ~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~LF~gTIre 1408 (1560)
...|++++|.|++||.+-|.|+||||||||+++|+|+++-.+|+|.+-. -..+-|+||.|++-.||+||
T Consensus 406 ~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~p~GtLre 474 (604)
T COG4178 406 QTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYLPQGTLRE 474 (604)
T ss_pred CeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCCCCccHHH
Confidence 3689999999999999999999999999999999999999999987741 13579999999999999999
Q ss_pred HHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHH
Q 000406 1409 NIALGNPK--ASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLE 1486 (1560)
Q Consensus 1409 NL~~g~~~--~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~ 1486 (1560)
=|++.++. .+|+|+.++|.+|+|.+++.++.+ .+ .-..-||+|||||||+||.||++|++++||||||+||++
T Consensus 475 ~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~-~~----~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~ 549 (604)
T COG4178 475 ALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDE-ED----RWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEE 549 (604)
T ss_pred HHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhc-cC----cHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChH
Confidence 99998644 799999999999999999999743 22 244579999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeC
Q 000406 1487 SEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRD 1525 (1560)
Q Consensus 1487 Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~ 1525 (1560)
+|..+.+.+++..+++|+|.|+||.......++.+-+++
T Consensus 550 ~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~~ 588 (604)
T COG4178 550 TEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELLD 588 (604)
T ss_pred HHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeecc
Confidence 999999999999999999999999988888777666653
No 137
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.4e-42 Score=388.53 Aligned_cols=227 Identities=48% Similarity=0.854 Sum_probs=207.0
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhcc
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQ 750 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~ 750 (1560)
+.|+++|++++|+. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.
T Consensus 1 ~~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 46899999999963 2358999999999999999999999999999999999999999999999999987777778889
Q ss_pred EEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCC
Q 000406 751 IGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDP 830 (1560)
Q Consensus 751 i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p 830 (1560)
++|++|++.+|++|++||+.++.......++.++++..++.++++.+|.|+++.++....+||||||||++|||||+.+|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876544555666677777888999999999999999889999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhh
Q 000406 831 RILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 831 ~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+..||+|++|++|++++.|+.+++...
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 999999999999999999999999988778999999999999878999999999999999988877643
No 138
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=1.2e-42 Score=359.24 Aligned_cols=207 Identities=33% Similarity=0.531 Sum_probs=180.0
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccH---HHHhc
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQV---KWLRT 749 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~---~~lr~ 749 (1560)
|+|+||+++|+.. +++|+||||+|++||++-|+||||||||||+|+|++...|+.|+|.++|.|+..+.. ..+|+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7999999999864 669999999999999999999999999999999999999999999999999987754 46899
Q ss_pred cEEEEecCCcCccc-cHHHHHhcCCCCC--C----HHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHH
Q 000406 750 QIGMVGQEPILFAT-SILENVLMGKENA--T----MKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIAL 822 (1560)
Q Consensus 750 ~i~~v~Q~~~lf~~-Tv~eNi~~g~~~~--~----~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRial 822 (1560)
+||+|+||..|... ||.||++|...-. . .+++.++++.+++.+ ....-+.+||||||||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~-----------k~~~lP~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKH-----------KARALPSQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccch-----------hhhcCccccCchHHHHHHH
Confidence 99999999998876 9999999975422 2 233444555554444 4444456899999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecC
Q 000406 823 ARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGN 892 (1560)
Q Consensus 823 ARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~ 892 (1560)
|||++.+|++||-||||.+|||+....|++.+.++. .|.||++.||+.+.+.. --|++.|++|+++....
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 999999999999999999999999999999999884 59999999999999987 57999999999987543
No 139
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=6.8e-42 Score=390.60 Aligned_cols=233 Identities=60% Similarity=0.967 Sum_probs=207.2
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++|+++.|+...+.++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...++++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997533346899999999999999999999999999999999999999999999999988777767778899
Q ss_pred EEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCCCE
Q 000406 753 MVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRI 832 (1560)
Q Consensus 753 ~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~i 832 (1560)
|++|++.+++.|++||+.++......+++.+.++..++.+++..+|.|+++.++....+||||||||++|||||+.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999989999999987654444555556666677888899999999999998999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhhcchHHH
Q 000406 833 LLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLERGGAYHD 905 (1560)
Q Consensus 833 llLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~~~~~~~ 905 (1560)
|||||||++||+.+.+.+.+.|+++.+|+|+|++||+++.+..||+|++|++|++++.|+.+++......+++
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~ 233 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQKGVYAK 233 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcChhHHH
Confidence 9999999999999999999999887678999999999999888999999999999999998888765444433
No 140
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-42 Score=371.68 Aligned_cols=216 Identities=36% Similarity=0.564 Sum_probs=186.0
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCcc---HHHHh
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQ---VKWLR 748 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~---~~~lr 748 (1560)
.|+++||+..||+ ++.+|+||||+|++||+|||+|+||||||||+++|.|+.+|++|+|.++|.++..+. ...+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 5899999999984 467999999999999999999999999999999999999999999999999998776 45678
Q ss_pred ccEEEEecCCcCccc-cHHHHHhcCCCCC-----------CHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHH
Q 000406 749 TQIGMVGQEPILFAT-SILENVLMGKENA-----------TMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQ 816 (1560)
Q Consensus 749 ~~i~~v~Q~~~lf~~-Tv~eNi~~g~~~~-----------~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQ 816 (1560)
++|||++|++.|.+. ||.+|++.|.-.. +.++. ..+.+.++.+ |+....-.+..+|||||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk------~~Al~aLerv--gi~~~A~qra~~LSGGQ 152 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDK------AQALDALERV--GILDKAYQRASTLSGGQ 152 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHH------HHHHHHHHHc--CcHHHHHHHhccCCcch
Confidence 899999999999986 9999999886431 12221 1222233333 44344445667999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHh--cCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecCh
Q 000406 817 KQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKI--SVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNH 893 (1560)
Q Consensus 817 rQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~ 893 (1560)
+|||+|||||+++|+|+|-|||+|+|||.+.+.+++.|+++ ..|.|+|+.-|.++.++. ||||+-|++|+|+..|++
T Consensus 153 QQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~ 232 (258)
T COG3638 153 QQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPA 232 (258)
T ss_pred hHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCCh
Confidence 99999999999999999999999999999999999999987 458999999999999976 999999999999999999
Q ss_pred hhHh
Q 000406 894 RQLL 897 (1560)
Q Consensus 894 ~~l~ 897 (1560)
+|+-
T Consensus 233 ~el~ 236 (258)
T COG3638 233 SELT 236 (258)
T ss_pred hhhh
Confidence 9864
No 141
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.7e-42 Score=354.60 Aligned_cols=210 Identities=32% Similarity=0.540 Sum_probs=184.9
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|.+++|.|+|...+ -..+++|++||++||+||||||||||+++|+|+..|.+|+|.|+|+|....++.+ +-++
T Consensus 2 l~L~~V~~~y~~~~-----~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~--RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHLP-----MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAE--RPVS 74 (231)
T ss_pred ccccceEEeeCcce-----EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCccc--CChh
Confidence 56889999997421 3578999999999999999999999999999999999999999999998776653 5699
Q ss_pred EEecCCcCccc-cHHHHHhcCCCC------CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHH
Q 000406 753 MVGQEPILFAT-SILENVLMGKEN------ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARA 825 (1560)
Q Consensus 753 ~v~Q~~~lf~~-Tv~eNi~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARA 825 (1560)
+++||..||.. ||++||.+|... ...+++..++..+++..+.+++| .+||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----------~~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----------GELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCc-----------cccCchHHHHHHHHHH
Confidence 99999999987 999999998532 12455667777888877777776 3799999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHh--cCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhhc
Q 000406 826 MIKDPRILLLDEPTSALDSESESIVQQAIDKI--SVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLERG 900 (1560)
Q Consensus 826 l~~~p~illLDEpts~LD~~~~~~i~~~l~~~--~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~~ 900 (1560)
|+++-+||+||||+|+|||.-+..+...+.++ .++.|+++|||.++.+.. +|+++++++|+|.+.|+.++++...
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~ 221 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGK 221 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccC
Confidence 99999999999999999999999999999877 468999999999999876 9999999999999999999987643
No 142
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-42 Score=372.67 Aligned_cols=224 Identities=29% Similarity=0.483 Sum_probs=187.6
Q ss_pred cEEEEEEEEEcCCCCC-ccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCC-HHHHhh
Q 000406 1313 GIELKMVTFTYPSRPE-VTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREIN-VKWLRK 1390 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~-~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~-l~~LR~ 1390 (1560)
-++++|+++.|+.... .++|+||||+|.+||++||||+||||||||.++|+|+.+|++|+|.+||.++.... .+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 4899999999975420 14999999999999999999999999999999999999999999999998766543 347788
Q ss_pred ceEEEcCCCC--CCC-ccHHHHHh----cCCCCCCHHHHHHHHHHHhHHH-HHHhCCCCccccccCCCCCCChHHHHHHH
Q 000406 1391 QTALVGQEPA--LFA-GTIRDNIA----LGNPKASWAEIEEAAEEAYIHK-FISSLPQGYETQVGESGVQLSGGQKQRIA 1462 (1560)
Q Consensus 1391 ~I~~VpQdp~--LF~-gTIreNL~----~g~~~~sd~eI~~al~~a~l~~-~I~~Lp~Gldt~Vge~G~~LSGGQrQRLa 1462 (1560)
.+.+|+|||. |=+ -||++-|. ...-.....+++++++.+++.+ |....| ..||||||||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 9999999996 222 36666654 2111223456889999998865 334444 469999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCc--eEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1463 IARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRA--TTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1463 LARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~--TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|||||.-+|++||||||||+||+-..++|++.|.++.+++ |.|+|||+++.+.. ||||+||++|+++|.++-+++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 9999999999999999999999999999999999887665 99999999999987 99999999999999999999987
Q ss_pred hccChHHHH
Q 000406 1540 SHLNGVYAS 1548 (1560)
Q Consensus 1540 ~~~~g~y~~ 1548 (1560)
. ....|.+
T Consensus 232 ~-~~h~ytr 239 (252)
T COG1124 232 H-PSHPYTR 239 (252)
T ss_pred C-CccHHHH
Confidence 3 3444543
No 143
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-41 Score=388.45 Aligned_cols=232 Identities=50% Similarity=0.818 Sum_probs=209.4
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++|++++|++. ..+|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDPG--RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCCC--CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4789999999632 45899999999999999999999999999999999999999999999999998888777888999
Q ss_pred EEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCCCE
Q 000406 753 MVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRI 832 (1560)
Q Consensus 753 ~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~i 832 (1560)
|++|++.+|+.|++||+.++......+++...++..++.+.+..+|.|+++.++..+.+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655455556666777788888999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhhcchHHHH
Q 000406 833 LLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLERGGAYHDL 906 (1560)
Q Consensus 833 llLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~~~~~~~l 906 (1560)
|||||||++||+.+...+.+.|.++.+|+|+|++||+++.+..||++++|++|++++.|+.+++......|+..
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~~~~~~ 232 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGLYAEM 232 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhcccHHHHH
Confidence 99999999999999999999999886689999999999999889999999999999999998887655444443
No 144
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-41 Score=400.85 Aligned_cols=221 Identities=23% Similarity=0.421 Sum_probs=187.7
Q ss_pred ccEEEEEEEEEcCCCC--CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCC------
Q 000406 1312 LGIELKMVTFTYPSRP--EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREI------ 1383 (1560)
Q Consensus 1312 ~~I~~~nVsf~Y~~~~--~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i------ 1383 (1560)
..|+++||+|+|+... ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||+++.+.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 3599999999996421 23699999999999999999999999999999999999999999999999998653
Q ss_pred ----------CHHHHhhceEEEcCCC--CCCCccHHHHHhcCC--CCCCHHHHHHHHHHHhHHHHHHhCCCCcc-ccccC
Q 000406 1384 ----------NVKWLRKQTALVGQEP--ALFAGTIRDNIALGN--PKASWAEIEEAAEEAYIHKFISSLPQGYE-TQVGE 1448 (1560)
Q Consensus 1384 ----------~l~~LR~~I~~VpQdp--~LF~gTIreNL~~g~--~~~sd~eI~~al~~a~l~~~I~~Lp~Gld-t~Vge 1448 (1560)
....+|++|+||+|+| .+|+.||+|||.++. ...+.++..+ ...+++..+ |++ .....
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~ 172 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK-----LAKFYLNKM--GLDDSYLER 172 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHc--CCChhHhcC
Confidence 3567899999999998 699999999998762 1233333322 123444444 554 45677
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHh-hcCEEEEEeCC
Q 000406 1449 SGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIR-EANMIAVVRDG 1526 (1560)
Q Consensus 1449 ~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~-~aDrIlVLd~G 1526 (1560)
.+.+||||||||++|||||+++|+||||||||++||+.+++.+.+.|+++. +++|+|+|||+++.+. .||||++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 788999999999999999999999999999999999999999999998764 5789999999999875 59999999999
Q ss_pred EEEEecCHHHHHh
Q 000406 1527 AVVEYGSHETLLA 1539 (1560)
Q Consensus 1527 ~IvE~Gt~~eLl~ 1539 (1560)
+|++.|+|+++++
T Consensus 253 ~i~~~g~~~~~~~ 265 (320)
T PRK13631 253 KILKTGTPYEIFT 265 (320)
T ss_pred EEEEeCCHHHHhc
Confidence 9999999998764
No 145
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=4.8e-41 Score=391.11 Aligned_cols=215 Identities=27% Similarity=0.350 Sum_probs=171.9
Q ss_pred CccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhh
Q 000406 1311 PLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRK 1390 (1560)
Q Consensus 1311 ~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~ 1390 (1560)
+.-+++.+|+|.|...+ .+.+++++++++.-.++++||++|+||||+++++.+-..|..|.+.+.+ |.
T Consensus 360 ~p~l~i~~V~f~y~p~~-y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~ 427 (582)
T KOG0062|consen 360 PPNLRISYVAFEYTPSE-YQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RL 427 (582)
T ss_pred CCeeEEEeeeccCCCcc-hhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cc
Confidence 34599999999997543 2799999999999999999999999999999999999999999988875 67
Q ss_pred ceEEEcCCCCCC-CccH--HHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHH
Q 000406 1391 QTALVGQEPALF-AGTI--RDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAI 1467 (1560)
Q Consensus 1391 ~I~~VpQdp~LF-~gTI--reNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARAL 1467 (1560)
+|+|-.|.-+=| +-.+ -+-+.--.|..+++|+++.|...|+.--+...+ -..||||||-||++|-+.
T Consensus 428 ri~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~s----------i~~LSGGQKsrvafA~~~ 497 (582)
T KOG0062|consen 428 RIKYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQS----------IASLSGGQKSRVAFAACT 497 (582)
T ss_pred eecchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhcc----------ccccCCcchhHHHHHHHh
Confidence 888888876532 2221 111111135558899999988877654443322 146999999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEe-cCHHHHHhhccChH
Q 000406 1468 LKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEY-GSHETLLASHLNGV 1545 (1560)
Q Consensus 1468 Lr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~-Gt~~eLl~~~~~g~ 1545 (1560)
..+|.+|||||||..||.++-..+-++|+.. + .-||+|||+.+.|.. |+.++|.++|+|.-+ |.- ..
T Consensus 498 ~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F-~-GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~ieg~~---------~~ 566 (582)
T KOG0062|consen 498 WNNPHLLVLDEPTNHLDRDSLGALAKALKNF-N-GGVVLVSHDEEFISSLCKELWVVEDGKVTPIEGGI---------DK 566 (582)
T ss_pred cCCCcEEEecCCCccccHHHHHHHHHHHHhc-C-CcEEEEECcHHHHhhcCceeEEEcCCcEEeeeccH---------HH
Confidence 9999999999999999999999999999864 3 459999999999987 999999999999873 221 24
Q ss_pred HHHHHHHhhhhcc
Q 000406 1546 YASLVRAETEANA 1558 (1560)
Q Consensus 1546 y~~l~~~q~~~~~ 1558 (1560)
|.++...+..+.+
T Consensus 567 yKkl~~~e~~~~~ 579 (582)
T KOG0062|consen 567 YKKLLGAELRAKA 579 (582)
T ss_pred HHHHHHHHHhhhh
Confidence 7777777665543
No 146
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.8e-41 Score=391.14 Aligned_cols=237 Identities=30% Similarity=0.500 Sum_probs=213.0
Q ss_pred CcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHh
Q 000406 669 VSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLR 748 (1560)
Q Consensus 669 ~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr 748 (1560)
..|.|+++|++++|+.. ...+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...++
T Consensus 16 ~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 16 LGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLR 94 (257)
T ss_pred CCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHh
Confidence 46789999999999742 24689999999999999999999999999999999999999999999999999888888888
Q ss_pred ccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhcc
Q 000406 749 TQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIK 828 (1560)
Q Consensus 749 ~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~ 828 (1560)
+.|+||+|++.+|++|++||+.+... ...+++.++.+..++.+++..+|.|+++.+++.+.+||||||||++|||||++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 173 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPECK-CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVR 173 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCCC-CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999876432 23445666777778889999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhh-cchHHHHH
Q 000406 829 DPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLER-GGAYHDLV 907 (1560)
Q Consensus 829 ~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~-~~~~~~l~ 907 (1560)
+|++|||||||++||+.++..+.+.++++.+++|+|++||+++.+..||+|++|++|++++.|+++++.+. .+.|++++
T Consensus 174 ~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 253 (257)
T cd03288 174 KSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLV 253 (257)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHH
Confidence 99999999999999999999999999987778999999999999988999999999999999999998764 34455554
No 147
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=9.2e-42 Score=366.39 Aligned_cols=228 Identities=32% Similarity=0.470 Sum_probs=194.4
Q ss_pred ccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHH---HH
Q 000406 1312 LGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVK---WL 1388 (1560)
Q Consensus 1312 ~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~---~L 1388 (1560)
..|++++|+++|.+ +.||+||||+|++||.+||+|+||||||||++++.|+..|++|+|+|+|.|+.+++.+ .+
T Consensus 7 ~~I~vr~v~~~fG~---~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~i 83 (263)
T COG1127 7 PLIEVRGVTKSFGD---RVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEI 83 (263)
T ss_pred ceEEEeeeeeecCC---EEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHH
Confidence 35999999999963 4699999999999999999999999999999999999999999999999999999864 56
Q ss_pred hhceEEEcCCCCCCCc-cHHHHHhcCC---CCCCHHHHHH----HHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000406 1389 RKQTALVGQEPALFAG-TIRDNIALGN---PKASWAEIEE----AAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQR 1460 (1560)
Q Consensus 1389 R~~I~~VpQdp~LF~g-TIreNL~~g~---~~~sd~eI~~----al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQR 1460 (1560)
|+++|+++|...||+. ||+||+.+.- .+.+++++++ .++.+||..-+. ..-...||||.+.|
T Consensus 84 r~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~----------~~~PsELSGGM~KR 153 (263)
T COG1127 84 RKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAA----------DLYPSELSGGMRKR 153 (263)
T ss_pred HhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhh----------hhCchhhcchHHHH
Confidence 9999999999999975 9999999852 2334444433 344455444311 12345799999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1461 IAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1461 LaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
+||||||.-+|+||++|||||+|||.+...+-+.|+++.+ +.|+|+|||+++++.. ||||+++.+|+|+..|+++||
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999987653 6899999999999987 899999999999999999999
Q ss_pred HhhccChHHHHHHHHh
Q 000406 1538 LASHLNGVYASLVRAE 1553 (1560)
Q Consensus 1538 l~~~~~g~y~~l~~~q 1553 (1560)
.+. .+.+..+++...
T Consensus 234 ~~s-d~P~v~qf~~G~ 248 (263)
T COG1127 234 LAS-DDPWVRQFFNGI 248 (263)
T ss_pred HhC-CCHHHHHHhcCC
Confidence 984 566666666543
No 148
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.8e-42 Score=395.41 Aligned_cols=217 Identities=33% Similarity=0.511 Sum_probs=194.6
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++||+.+|.+. . +|+|+||+|+.||.++|+||||||||||+++|+||.+|++|+|.|||.+++++++++ +.|
T Consensus 3 ~i~l~~v~K~yg~~--~-~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF--E-VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc--e-eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999632 2 899999999999999999999999999999999999999999999999999999975 799
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCCCC------CCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000406 1393 ALVGQEPALFAG-TIRDNIALGNPK------ASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIAR 1465 (1560)
Q Consensus 1393 ~~VpQdp~LF~g-TIreNL~~g~~~------~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLAR 1465 (1560)
++|+|+..||+- ||+|||.|+... .-++++.++++..++...+...| .+||||||||+||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHH
Confidence 999999999975 999999998432 12466778888888888887776 379999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhhcc
Q 000406 1466 AILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLASHL 1542 (1560)
Q Consensus 1466 ALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~~~ 1542 (1560)
||+++|++++||||.|+||+.....+...|+++.+ +.|+|.|||+-..++. +|||+||++|+|.+.|+|.|+..+ .
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~-P 225 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYER-P 225 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhC-c
Confidence 99999999999999999999999999999988654 5799999999998876 999999999999999999999984 4
Q ss_pred ChHH
Q 000406 1543 NGVY 1546 (1560)
Q Consensus 1543 ~g~y 1546 (1560)
...|
T Consensus 226 ~n~f 229 (338)
T COG3839 226 ANLF 229 (338)
T ss_pred cchh
Confidence 4444
No 149
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.1e-42 Score=381.82 Aligned_cols=214 Identities=35% Similarity=0.587 Sum_probs=193.4
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecC-CCCHHHHhhc
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLR-EINVKWLRKQ 1391 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~-~i~l~~LR~~ 1391 (1560)
.++++|++|+|+++ .++|+++||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.++. ..+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48999999999865 57999999999999999999999999999999999999999999999999998 4889999999
Q ss_pred eEEEcCCC--CCCCccHHHHHhcCCC--CCCHHH----HHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000406 1392 TALVGQEP--ALFAGTIRDNIALGNP--KASWAE----IEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAI 1463 (1560)
Q Consensus 1392 I~~VpQdp--~LF~gTIreNL~~g~~--~~sd~e----I~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaL 1463 (1560)
+|+|+|+| ++|..||.+.++||.. ..+.+| +.++++.+++.++...- ..+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----------p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRP-----------PFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCC-----------ccccCCcceeeHHh
Confidence 99999999 7999999999999832 334444 56777777777664333 35799999999999
Q ss_pred HHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCC--ceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1464 ARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKR--ATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1464 ARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~--~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|.+|..+|+|||||||||+||+...+.+.+.++++.+. +|+|+|||+++.+.. |||++||++|+++.+|+|+++.+
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~ 228 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFN 228 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhh
Confidence 99999999999999999999999999999999998644 699999999999988 99999999999999999999987
No 150
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.2e-41 Score=382.03 Aligned_cols=220 Identities=34% Similarity=0.580 Sum_probs=202.8
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhcc
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQ 750 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~ 750 (1560)
|.|+++|++++|+.. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 468999999999742 2469999999999999999999999999999999999999999999999999988887788889
Q ss_pred EEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCC
Q 000406 751 IGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDP 830 (1560)
Q Consensus 751 i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p 830 (1560)
++|++|++.+++.|++|||.+... ...+++.++++..++.+++..+|.|+++..++.+.+||||||||++|||||+.+|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFGE-YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCCC-CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999987543 3566777788888889999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecC
Q 000406 831 RILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGN 892 (1560)
Q Consensus 831 ~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~ 892 (1560)
++|||||||++||+.+++.+.+.|+++.++.|+|++||+++.+..||++++|++|++++.|+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999998877899999999999998899999999999998775
No 151
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.4e-42 Score=365.40 Aligned_cols=223 Identities=32% Similarity=0.494 Sum_probs=193.6
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCC---HHHHh
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREIN---VKWLR 1389 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~---l~~LR 1389 (1560)
.|+++||+.+||+ ...+|+||||+|++||.|||+|+||||||||++.|.|+.+|++|+|+++|.++...+ +..+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 4899999999984 357999999999999999999999999999999999999999999999999999987 66778
Q ss_pred hceEEEcCCCCCCCc-cHHHHHhcCCC--------------CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCC
Q 000406 1390 KQTALVGQEPALFAG-TIRDNIALGNP--------------KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLS 1454 (1560)
Q Consensus 1390 ~~I~~VpQdp~LF~g-TIreNL~~g~~--------------~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LS 1454 (1560)
++||+|+|.+.|-+. |+.+|+..|.- ..+.....++|+++++.++... +..+||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~q-----------ra~~LS 149 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQ-----------RASTLS 149 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHH-----------HhccCC
Confidence 999999999998865 99999986632 1223456678888888765432 345799
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhh-cCEEEEEeCCEEEEe
Q 000406 1455 GGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEY 1531 (1560)
Q Consensus 1455 GGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~ 1531 (1560)
|||+||++|||||..+|+|+|-|||+|+|||.+.+.|++.|++.. .|.|||+.-|.++.++. ||||+-|++|+|+-.
T Consensus 150 GGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfD 229 (258)
T COG3638 150 GGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFD 229 (258)
T ss_pred cchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEe
Confidence 999999999999999999999999999999999999999999864 56899999999999976 999999999999999
Q ss_pred cCHHHHHhhccChHHHHHHHH
Q 000406 1532 GSHETLLASHLNGVYASLVRA 1552 (1560)
Q Consensus 1532 Gt~~eLl~~~~~g~y~~l~~~ 1552 (1560)
|++.||-+ ..+.+.|..
T Consensus 230 g~~~el~~----~~~~~iYg~ 246 (258)
T COG3638 230 GPASELTD----EALDEIYGN 246 (258)
T ss_pred CChhhhhH----HHHHHHhcc
Confidence 99999654 344444443
No 152
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-41 Score=387.22 Aligned_cols=212 Identities=36% Similarity=0.499 Sum_probs=182.0
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCH---HHHhh
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINV---KWLRK 1390 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l---~~LR~ 1390 (1560)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 578999999963 359999999999999999999999999999999999999999999999999988764 56788
Q ss_pred ceEEEcCCCCCCCc-cHHHHHhcCCC---CCCHH----HHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 000406 1391 QTALVGQEPALFAG-TIRDNIALGNP---KASWA----EIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIA 1462 (1560)
Q Consensus 1391 ~I~~VpQdp~LF~g-TIreNL~~g~~---~~sd~----eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLa 1462 (1560)
.++||||++.+|.. |++||+.++.. ..+.+ ++.++++..++.++ .......||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGA-----------EDLYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHH
Confidence 99999999999986 99999987521 12332 23444444444332 22334579999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1463 IARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1463 LARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 99999999999999999999999999999999998753 7899999999999876 99999999999999999999885
No 153
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=9e-42 Score=386.76 Aligned_cols=212 Identities=35% Similarity=0.573 Sum_probs=182.4
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhccc-----CCCccEEEECCEecCCCC--HH
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFY-----DPNQGKVMIEGVDLREIN--VK 1386 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~-----~p~~G~I~IdGvdi~~i~--l~ 1386 (1560)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.++|.++...+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 578999999964 35999999999999999999999999999999999999 999999999999998876 56
Q ss_pred HHhhceEEEcCCCCCCCccHHHHHhcCCCC--C-C----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000406 1387 WLRKQTALVGQEPALFAGTIRDNIALGNPK--A-S----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQ 1459 (1560)
Q Consensus 1387 ~LR~~I~~VpQdp~LF~gTIreNL~~g~~~--~-s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQ 1459 (1560)
.+|++++|+||++.+|..|++||+.++... . . ++++.++++..++.+.+...++ +.+|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 788899999999999988999999874211 1 1 2345556666555544333211 4579999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1460 RIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1460 RLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 999999999999999999999999999999999999988655899999999999875 999999999999999998764
No 154
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.6e-42 Score=382.01 Aligned_cols=219 Identities=33% Similarity=0.577 Sum_probs=191.1
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecC-CccHHHHhcc
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLK-SLQVKWLRTQ 750 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~-~~~~~~lr~~ 750 (1560)
.|+++|++|+|+.+ .++|+++||+|++||.++|+|+||||||||+++|.|+++|++|.|.++|.++. ..+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48899999999854 57999999999999999999999999999999999999999999999999988 4778899999
Q ss_pred EEEEecCC--cCccccHHHHHhcCCCCC--CHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHh
Q 000406 751 IGMVGQEP--ILFATSILENVLMGKENA--TMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAM 826 (1560)
Q Consensus 751 i~~v~Q~~--~lf~~Tv~eNi~~g~~~~--~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl 826 (1560)
+|||+|+| .+|..||.|.++||..+. ..+++.+..+.+ +.. .|+.....+.+.+||||||||+|||.+|
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~-----l~~--vgl~~~~~r~p~~LSGGqkqRvaIA~vL 153 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEA-----LEL--VGLEELLDRPPFNLSGGQKQRVAIAGVL 153 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHH-----HHH--cCchhhccCCccccCCcceeeHHhhHHH
Confidence 99999999 789999999999997643 233333222211 222 2454556677889999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 827 IKDPRILLLDEPTSALDSESESIVQQAIDKISV--GRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 827 ~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
+.+|+|||||||||+||+...+.+.+.++++.+ |+|+|++||+++.+.. |||+++|++|+++.+|+|+++.+.
T Consensus 154 a~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 154 AMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred HcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 999999999999999999999999999999853 5899999999999977 999999999999999999888753
No 155
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.1e-41 Score=348.70 Aligned_cols=208 Identities=34% Similarity=0.548 Sum_probs=188.4
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|.+++|.|.|..- ==.++++|++||+|||+||||||||||+++++||..|.+|+|+|+|+|....++. ++=++
T Consensus 2 l~L~~V~~~y~~~-----~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHL-----PMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcc-----eEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 5688999999632 2468999999999999999999999999999999999999999999999888775 46799
Q ss_pred EEcCCCCCCC-ccHHHHHhcCC-CC-----CCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000406 1394 LVGQEPALFA-GTIRDNIALGN-PK-----ASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARA 1466 (1560)
Q Consensus 1394 ~VpQdp~LF~-gTIreNL~~g~-~~-----~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARA 1466 (1560)
+++||..||. -||++|+.+|. |. ...+.+..++..+|+..+...||. .||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 9999999997 49999999983 32 234678999999999999999994 699999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1467 ILKGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1467 LLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|+|+-|||+||||.|+||+.-.+++...+.+++ ++.|+++|||.++.++. +||++++++|||++.|+-+++++
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~ 219 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLS 219 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhc
Confidence 999999999999999999999999999998876 35799999999999876 99999999999999999999997
No 156
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=1.1e-41 Score=404.10 Aligned_cols=220 Identities=30% Similarity=0.514 Sum_probs=186.5
Q ss_pred EEEEEEEEEcCCCC-CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHH---HHh
Q 000406 673 IEFKGVTFAYPSRP-ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVK---WLR 748 (1560)
Q Consensus 673 i~~~~vs~~y~~~~-~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~---~lr 748 (1560)
|+++||+++|+... ..++|+||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++..++.. .+|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 24699999999999999999999999999999999999999999999999999887654 357
Q ss_pred ccEEEEecCCcCcc-ccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHH
Q 000406 749 TQIGMVGQEPILFA-TSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARA 825 (1560)
Q Consensus 749 ~~i~~v~Q~~~lf~-~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARA 825 (1560)
++|+||||++.+|+ .||+||+.++... ...++..+ .+.+.++.+ |+....+..+.+|||||||||+||||
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~v~e~l~~v--gL~~~~~~~~~~LSgGqkQRV~IARA 154 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKR-----KVTELLALV--GLGDKHDSYPSNLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 89999999999996 5999999886421 12222211 112233333 55555667788999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 826 MIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 826 l~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
|+.+|+|||||||||+||+.+...+.+.|+++. .|.|+|+|||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 155 L~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~ 231 (343)
T TIGR02314 155 LASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSH 231 (343)
T ss_pred HHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcC
Confidence 999999999999999999999999999999874 38999999999999976 999999999999999999998753
No 157
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.7e-41 Score=369.10 Aligned_cols=207 Identities=36% Similarity=0.511 Sum_probs=173.8
Q ss_pred EEEEEEEEEcCCCC-CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHH---H-
Q 000406 1314 IELKMVTFTYPSRP-EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKW---L- 1388 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~-~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~---L- 1388 (1560)
++++||+..|.... ...+|++|||+|++||.|||+||||||||||+++|.++..|++|.|.++|.|+..++.+. +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67999999996432 246999999999999999999999999999999999999999999999999999998543 4
Q ss_pred hhceEEEcCCCCCCCc-cHHHHHhcC----CCC--CCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000406 1389 RKQTALVGQEPALFAG-TIRDNIALG----NPK--ASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRI 1461 (1560)
Q Consensus 1389 R~~I~~VpQdp~LF~g-TIreNL~~g----~~~--~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRL 1461 (1560)
|++||+|+|+..|++. |++||+.+. ... ...+.+.+.++.+++.+.... ....+||||||||+
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~----------~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLK----------KKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhcc----------CCchhcCHHHHHHH
Confidence 4679999999998865 999999842 111 112334455555555543331 23457999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhhcCEEEEEeCCEEEE
Q 000406 1462 AIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIREANMIAVVRDGAVVE 1530 (1560)
Q Consensus 1462 aLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~aDrIlVLd~G~IvE 1530 (1560)
||||||+.+|+|++.||||.+||.+|.+.|.+.+++..+ ++|+|+|||+......|||++.|.+|++.+
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 999999999999999999999999999999999998753 689999999999999999999999999544
No 158
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=2.5e-41 Score=382.95 Aligned_cols=218 Identities=49% Similarity=0.791 Sum_probs=198.6
Q ss_pred CccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhh
Q 000406 1311 PLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRK 1390 (1560)
Q Consensus 1311 ~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~ 1390 (1560)
.+.++++|++++|+.+...++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+...+|+
T Consensus 9 ~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 88 (226)
T cd03248 9 KGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLHS 88 (226)
T ss_pred CceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHHh
Confidence 34699999999997532346999999999999999999999999999999999999999999999999998888778889
Q ss_pred ceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccC
Q 000406 1391 QTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKG 1470 (1560)
Q Consensus 1391 ~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~ 1470 (1560)
.++|+||++.+|++|++||+.++.......++.+..+..++.+++..+|.|+++.+.....+||||||||++|||||+++
T Consensus 89 ~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~~ 168 (226)
T cd03248 89 KVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIRN 168 (226)
T ss_pred hEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999976544445566666667788899999998999999999999999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEE
Q 000406 1471 SRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAV 1528 (1560)
Q Consensus 1471 p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~I 1528 (1560)
|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+..||+|++|++|++
T Consensus 169 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 169 PQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 9999999999999999999999999988777899999999999988999999999975
No 159
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.9e-41 Score=376.29 Aligned_cols=210 Identities=28% Similarity=0.490 Sum_probs=180.6
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|.++ ++|+||||++++|++++|+||||||||||+|+|+|+++|.+|+|.+.|.+++.... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 58999999999742 49999999999999999999999999999999999999999999999987765322 4589
Q ss_pred EEEecCC---cCccccHHHHHhcCCCCC----------CHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHH
Q 000406 752 GMVGQEP---ILFATSILENVLMGKENA----------TMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQ 818 (1560)
Q Consensus 752 ~~v~Q~~---~lf~~Tv~eNi~~g~~~~----------~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQ 818 (1560)
|||||.. |-|+-||+|-+.+|.... +.+++.++++.+++.++ .++...+|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~-----------~~r~i~~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDL-----------RDRQIGELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhh-----------hCCcccccCcHHHH
Confidence 9999965 568899999999985321 12556666666665543 34455689999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 819 RIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 819 RialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
|+.|||||+++|++|||||||+++|+.++..+.+.|+++. +|+||++||||++.+.. +|+|+.| |++++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhc
Confidence 9999999999999999999999999999999999999985 49999999999999876 9999999 5678899999998
Q ss_pred hhh
Q 000406 897 LER 899 (1560)
Q Consensus 897 ~~~ 899 (1560)
+..
T Consensus 226 ~~~ 228 (254)
T COG1121 226 LTE 228 (254)
T ss_pred cCH
Confidence 753
No 160
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-41 Score=385.81 Aligned_cols=217 Identities=29% Similarity=0.460 Sum_probs=189.4
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC---CCccEEEECCEecCCCCHHHHh
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD---PNQGKVMIEGVDLREINVKWLR 1389 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~---p~~G~I~IdGvdi~~i~l~~LR 1389 (1560)
.|+++||+++|++ +++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++...+...+|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 3789999999963 359999999999999999999999999999999999985 6899999999999988888889
Q ss_pred hceEEEcCCCCCCCccHHHHHhcCCC--------CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000406 1390 KQTALVGQEPALFAGTIRDNIALGNP--------KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRI 1461 (1560)
Q Consensus 1390 ~~I~~VpQdp~LF~gTIreNL~~g~~--------~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRL 1461 (1560)
+.++|+||++.+|..|++||+.++.. ...++++.++++.+++.+++.. .....+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHHH
Confidence 99999999999999999999986521 1112345566666666444332 23455678999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1462 AIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1462 aLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
+|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 230 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFE 230 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999988778999999999998865 99999999999999999999986
No 161
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.8e-41 Score=374.94 Aligned_cols=209 Identities=31% Similarity=0.509 Sum_probs=185.4
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++|++|+|.++ +||+||||+|++||.+||+||||||||||+|+++|+++|.+|+|.+.|.+++.... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 59999999999643 49999999999999999999999999999999999999999999999998776543 5789
Q ss_pred EEEcCCC---CCCCccHHHHHhcCCCC----------CCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000406 1393 ALVGQEP---ALFAGTIRDNIALGNPK----------ASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQ 1459 (1560)
Q Consensus 1393 ~~VpQdp---~LF~gTIreNL~~g~~~----------~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQ 1459 (1560)
|||||.. .-|+-||+|=+.+|... .+.+++.+||+.+++.++.. -++| .|||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~-------r~i~----~LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRD-------RQIG----ELSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhC-------Cccc----ccCcHHHH
Confidence 9999966 35789999999887321 23488999999999998753 3455 59999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC-CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1460 RIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK-RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1460 RLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~-~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
|+.|||||+.+|++|||||||+++|+.++..|.+.|+++.+ |||||+|+|+++.+.. +|+|+.|. ++++..|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhc
Confidence 99999999999999999999999999999999999998764 7999999999999976 99999997 667889999999
Q ss_pred Hh
Q 000406 1538 LA 1539 (1560)
Q Consensus 1538 l~ 1539 (1560)
+.
T Consensus 226 ~~ 227 (254)
T COG1121 226 LT 227 (254)
T ss_pred cC
Confidence 86
No 162
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-41 Score=392.54 Aligned_cols=216 Identities=31% Similarity=0.500 Sum_probs=189.1
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++||+++|+.....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 38999999999642224599999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEcCCC--CCCCccHHHHHhcCCC--CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000406 1393 ALVGQEP--ALFAGTIRDNIALGNP--KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIA 1464 (1560)
Q Consensus 1393 ~~VpQdp--~LF~gTIreNL~~g~~--~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLA 1464 (1560)
+||+|+| .++..||+|||.++.. ..+. +++.++++.+++.++.... ..+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKERE-----------PARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHHHHHH
Confidence 9999998 4667899999987621 1222 3456667776666554443 357999999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000406 1465 RAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1465 RALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||||++|++|++++.|+++++.+
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 229 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFS 229 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHc
Confidence 999999999999999999999999999999998753 789999999999998899999999999999999999876
No 163
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=9.8e-42 Score=352.39 Aligned_cols=208 Identities=31% Similarity=0.478 Sum_probs=186.9
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHH---HHhh
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVK---WLRK 1390 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~---~LR~ 1390 (1560)
|+|+||+.+|+.. +++|+||||+|++||.+=|+||||||||||+++|++...|+.|+|.++|.|++.+.-+ -||+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7999999999865 5699999999999999999999999999999999999999999999999999988754 5899
Q ss_pred ceEEEcCCCCCCC-ccHHHHHhcCCC--CC----CHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000406 1391 QTALVGQEPALFA-GTIRDNIALGNP--KA----SWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAI 1463 (1560)
Q Consensus 1391 ~I~~VpQdp~LF~-gTIreNL~~g~~--~~----sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaL 1463 (1560)
+||+|+||..|+. -|+.||+++.-. .. -.+++.++|+.++|.+....+|. .|||||+||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHH
Confidence 9999999998775 599999997531 11 23567899999999999999984 699999999999
Q ss_pred HHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhhc-CEEEEEeCCEEEEecCH
Q 000406 1464 ARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIREA-NMIAVVRDGAVVEYGSH 1534 (1560)
Q Consensus 1464 ARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~a-DrIlVLd~G~IvE~Gt~ 1534 (1560)
|||++.+|++||-||||-|||+++...|++.+.+.. .|.|||+.||+.+.+..+ -|++.+++|+++....+
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 999999999999999999999999999999999874 578999999999999885 68999999999876543
No 164
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-41 Score=366.30 Aligned_cols=218 Identities=32% Similarity=0.487 Sum_probs=180.3
Q ss_pred cEEEEEEEEEcCCCC-CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCc-cHHHHhc
Q 000406 672 KIEFKGVTFAYPSRP-ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSL-QVKWLRT 749 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~-~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~-~~~~lr~ 749 (1560)
.|+++|+++.|+... ..++|+||||+|.+||+++|+|+||||||||.++|+|+.+|++|+|.++|.++... ..+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 489999999997532 11489999999999999999999999999999999999999999999999877654 3346778
Q ss_pred cEEEEecCCc--Ccc-ccHHHHHhcCCCC----CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHH
Q 000406 750 QIGMVGQEPI--LFA-TSILENVLMGKEN----ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIAL 822 (1560)
Q Consensus 750 ~i~~v~Q~~~--lf~-~Tv~eNi~~g~~~----~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRial 822 (1560)
.|-+|||||. |-+ .||++-|.-+... ...+++.++++.+++. .....+.+.+|||||||||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~----------~~~l~R~P~eLSGGQ~QRiaI 152 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLP----------PSFLDRRPHELSGGQRQRIAI 152 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCC----------HHHHhcCchhcChhHHHHHHH
Confidence 8999999995 333 3887776543322 1223334444443321 234567788999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 823 ARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISV--GRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 823 ARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
||||.-+|++||||||||+||+..+..|++.+.++.+ +-|.|+|||++..+.+ ||||+||++|+++|.++..++...
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 9999999999999999999999999999999998854 6699999999999987 999999999999999999998765
No 165
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=9e-38 Score=381.11 Aligned_cols=503 Identities=15% Similarity=0.148 Sum_probs=356.9
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHhcCCCCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000406 353 GALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLEITCWRLVGERSAQRIRTKYL 432 (1560)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~lr~~l~ 432 (1560)
..++......+...|.+.+.+.+.... .......+.++..++++.++...++.++...+..++..-|-..++
T Consensus 55 ~~l~~v~~~v~~~~w~~~~~~aL~~~d--------~~~f~~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~ 126 (604)
T COG4178 55 LILLSVRGQVLLNDWNGPFYNALARRD--------LAAFWQQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLL 126 (604)
T ss_pred HHHHHhheeeeeHhhhhHHHHHHHHhh--------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444445555555555544221 122333455666666666677777777777777788888888888
Q ss_pred HHHHhcCchhhccCCChh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------
Q 000406 433 RAVLRQDIAFFDTEVSTS------DIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLRS-------------- 492 (1560)
Q Consensus 433 ~~ll~~~l~ffd~~~~~G------~i~~r~s~Dv~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~s-------------- 492 (1560)
++-+...-.|+. . ..| -.=+|+.+|+..+-+........++.++.+++.-.++.+-.+
T Consensus 127 ~~wl~~~~~y~l-~-~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I 204 (604)
T COG4178 127 DRWLDPRRYYRL-A-QAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGI 204 (604)
T ss_pred HHHhcCCchHHH-H-hcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccCcceEeeccccccc
Confidence 888888744442 2 222 133799999999988777777777777766665544444222
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHhHhHHHhH
Q 000406 493 -WKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAK 571 (1560)
Q Consensus 493 -~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tIka~~~e~~~~~~~~~~~~~~~~~~~k 571 (1560)
..+..++++.+++--++..++.+.+.++.....+..+..-....-.-++.+.|-.|+.|+...++..+........-.+
T Consensus 205 ~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~ 284 (604)
T COG4178 205 PGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRR 284 (604)
T ss_pred chHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 1222222223333333444556666666655555555555555667788889999999999888777665554432222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 000406 572 LGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIID 651 (1560)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~ls~g~~~~~l~~~~~~~~~l~~~~~~~~~~~~a~~a~~Ri~~~l~ 651 (1560)
..........+.....++..++-+..++-....|.++.|.+.....++......+......+..+..-.+...|+.+|.+
T Consensus 285 l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ 364 (604)
T COG4178 285 LVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQ 364 (604)
T ss_pred HHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 22222111112222222222222333445567899999999998888888888999999999999999999999999975
Q ss_pred cCC--CCCCCCCCC--CcC---CCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcC
Q 000406 652 RVP--EIDPYNSEG--RKL---SSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERF 724 (1560)
Q Consensus 652 ~~~--~~~~~~~~~--~~~---~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~ 724 (1560)
... +.++..... ... ......|+++|++..-|.. ...|+++||.+++||.+.|.|+||||||||+++|+|+
T Consensus 365 ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~--~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGL 442 (604)
T COG4178 365 ALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG--QTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGL 442 (604)
T ss_pred HHHhccCcccccCcccccccccccccceeEEeeeeEECCCC--CeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhcc
Confidence 432 111100000 000 0014689999999998853 4689999999999999999999999999999999999
Q ss_pred CCCCccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCC
Q 000406 725 YDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYD 802 (1560)
Q Consensus 725 ~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~ 802 (1560)
++--+|+|.+... ..+-|+||.|++-.||.||-|+++... .+++++.+++.++++.++++++.. .+
T Consensus 443 WP~g~G~I~~P~~-----------~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~-~~ 510 (604)
T COG4178 443 WPWGSGRISMPAD-----------SALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDE-ED 510 (604)
T ss_pred CccCCCceecCCC-----------CceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhc-cC
Confidence 9999999977521 358999999999999999999998765 678999999999999999998743 22
Q ss_pred cccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEE
Q 000406 803 TQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVL 882 (1560)
Q Consensus 803 t~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl 882 (1560)
. =...||+||||||++||.|+++|++++|||+|||||++++..+.+.+++...+.|+|-|.||.......++.+-+
T Consensus 511 ~----W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l 586 (604)
T COG4178 511 R----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLEL 586 (604)
T ss_pred c----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheee
Confidence 2 335799999999999999999999999999999999999999999999988899999999999887766666555
Q ss_pred e
Q 000406 883 D 883 (1560)
Q Consensus 883 ~ 883 (1560)
.
T Consensus 587 ~ 587 (604)
T COG4178 587 L 587 (604)
T ss_pred c
Confidence 4
No 166
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=9.5e-41 Score=372.95 Aligned_cols=206 Identities=37% Similarity=0.593 Sum_probs=183.7
Q ss_pred CCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHH
Q 000406 1309 SKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWL 1388 (1560)
Q Consensus 1309 ~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~L 1388 (1560)
+..+.++++|++++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+...+
T Consensus 2 ~~~~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 2 PEHGEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 345579999999999642 2369999999999999999999999999999999999999999999999999998888888
Q ss_pred hhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHc
Q 000406 1389 RKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAIL 1468 (1560)
Q Consensus 1389 R~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALL 1468 (1560)
|+.|+||||+|.+|++|+++|+.+.. ..+++++.++++ +......|||||+||++||||++
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~-~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~ 141 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFD-EYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALL 141 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccC-CCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHh
Confidence 99999999999999999999998753 234444444433 23456789999999999999999
Q ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCH
Q 000406 1469 KGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSH 1534 (1560)
Q Consensus 1469 r~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~ 1534 (1560)
++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+..||+|++|++|++++.|++
T Consensus 142 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 142 KRPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred hCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999999988778999999999999988999999999999998864
No 167
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=8.4e-41 Score=377.02 Aligned_cols=220 Identities=40% Similarity=0.690 Sum_probs=198.2
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhcc
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQ 750 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~ 750 (1560)
+.|+++|+++.|+.. ..++|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.++|.++...+...+++.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 358999999999642 2468999999999999999999999999999999999999999999999999887776677888
Q ss_pred EEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCC
Q 000406 751 IGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDP 830 (1560)
Q Consensus 751 i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p 830 (1560)
++|++|++.+|..|+.||+.++......+++.+.++..++.+.+...|.|+++.+.+...+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999889999998875444455666677777888889999999999998888999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEec
Q 000406 831 RILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIG 891 (1560)
Q Consensus 831 ~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G 891 (1560)
++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999886568999999999988679999999999998754
No 168
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.7e-41 Score=400.36 Aligned_cols=227 Identities=30% Similarity=0.506 Sum_probs=188.4
Q ss_pred EEEEEEEEEcCCCC-CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHH---Hh
Q 000406 1314 IELKMVTFTYPSRP-EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKW---LR 1389 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~-~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~---LR 1389 (1560)
|+++||+++|+... +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996211 346999999999999999999999999999999999999999999999999999887654 47
Q ss_pred hceEEEcCCCCCCC-ccHHHHHhcCCC--CCCHH----HHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 000406 1390 KQTALVGQEPALFA-GTIRDNIALGNP--KASWA----EIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIA 1462 (1560)
Q Consensus 1390 ~~I~~VpQdp~LF~-gTIreNL~~g~~--~~sd~----eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLa 1462 (1560)
++|+||||++.+|. .|++||+.++.. ..+.+ ++.++++..++. ........+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~-----------~~~~~~~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLS-----------DKADRYPAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCc-----------hhhhCChhhCCHHHHHHHH
Confidence 89999999999886 699999987521 12222 233444444433 3333344579999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1463 IARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1463 LARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998753 6899999999999876 99999999999999999999986
Q ss_pred hccChHHHHHHH
Q 000406 1540 SHLNGVYASLVR 1551 (1560)
Q Consensus 1540 ~~~~g~y~~l~~ 1551 (1560)
+..+.....++.
T Consensus 231 ~~~~~~~~~~~~ 242 (343)
T PRK11153 231 HPKHPLTREFIQ 242 (343)
T ss_pred CCCcHHHHHHHh
Confidence 322334444543
No 169
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-41 Score=399.91 Aligned_cols=212 Identities=31% Similarity=0.504 Sum_probs=186.2
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++||+++|.+ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...++. +++|
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5999999999963 4589999999999999999999999999999999999999999999999999887754 5789
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCCC--CCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000406 1393 ALVGQEPALFAG-TIRDNIALGNP--KAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIAR 1465 (1560)
Q Consensus 1393 ~~VpQdp~LF~g-TIreNL~~g~~--~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLAR 1465 (1560)
+||+|++.||+. |++|||.++.. ..+ .+++.++++..++.++.... ...||||||||+||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~-----------~~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRY-----------VDQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHHH
Confidence 999999999975 99999998632 122 24556666666665544333 4579999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000406 1466 AILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLAS 1540 (1560)
Q Consensus 1466 ALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~ 1540 (1560)
||+++|+|||||||||+||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||||+||++|+|++.|+++++.++
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999999998754 6899999999999865 999999999999999999999874
No 170
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-41 Score=400.43 Aligned_cols=213 Identities=28% Similarity=0.465 Sum_probs=187.4
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++||+++|++ +..+|+|+||+|++||.+||+||||||||||+++|+|+++|++|+|.+||.++.++++. ++.|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 3899999999942 24699999999999999999999999999999999999999999999999999988764 4789
Q ss_pred EEEcCCCCCCC-ccHHHHHhcCCC--CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000406 1393 ALVGQEPALFA-GTIRDNIALGNP--KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIAR 1465 (1560)
Q Consensus 1393 ~~VpQdp~LF~-gTIreNL~~g~~--~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLAR 1465 (1560)
+||||++.+|+ .||+|||.++.. ..+. +++.++++..++.++....| .+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHH
Confidence 99999999996 599999998632 1222 34567777777766655544 479999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000406 1466 AILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLAS 1540 (1560)
Q Consensus 1466 ALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~ 1540 (1560)
||+++|+|||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|++++++++
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 99999999999999999999999999999998754 6899999999998865 999999999999999999999874
No 171
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.3e-41 Score=375.89 Aligned_cols=213 Identities=31% Similarity=0.514 Sum_probs=180.1
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCe---ecCCccHHHHh
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGH---DLKSLQVKWLR 748 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~---~i~~~~~~~lr 748 (1560)
.|+++|+++.|+. ..+++||||+|+.||.+|+.|||||||||||++|+|+..|+.|.|.++|+ |.++...+ .
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~--~ 76 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVR--D 76 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchh--h
Confidence 4788999999974 45899999999999999999999999999999999999999999999999 55553332 3
Q ss_pred ccEEEEecCCcCccc-cHHHHHhcCCCCC----CH----HHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHH
Q 000406 749 TQIGMVGQEPILFAT-SILENVLMGKENA----TM----KEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQR 819 (1560)
Q Consensus 749 ~~i~~v~Q~~~lf~~-Tv~eNi~~g~~~~----~~----~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQR 819 (1560)
++||+|+|+..||.. ||.+||.||..-. +. .++.+.++.++ ++..-...+.+||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvq-----------L~~la~ryP~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQ-----------LEGLADRYPAQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhc-----------ccchhhcCchhcChHHHHH
Confidence 579999999999975 9999999997321 11 22222233332 2333356778999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 820 IALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 820 ialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
|||||||..+|++||||||+++||++-++.+.+.|+++. -|.|+++||||.+++.. ||||+||++|+|...|+++|+
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 999999999999999999999999999999999998873 38999999999999865 999999999999999999999
Q ss_pred hhhc
Q 000406 897 LERG 900 (1560)
Q Consensus 897 ~~~~ 900 (1560)
....
T Consensus 226 ~~~P 229 (345)
T COG1118 226 YDHP 229 (345)
T ss_pred hcCC
Confidence 7643
No 172
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=379.31 Aligned_cols=224 Identities=34% Similarity=0.552 Sum_probs=189.8
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEcCCCCCCCccHHHHHhcCCCC--CCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccC
Q 000406 1393 ALVGQEPALFAGTIRDNIALGNPK--ASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKG 1470 (1560)
Q Consensus 1393 ~~VpQdp~LF~gTIreNL~~g~~~--~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~ 1470 (1560)
+|+||++.+|+.|++||+.++... ...+++.+.++..++.+ .........||||||||++|||||+++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNK----------EYATRDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCH----------HHhhCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999875321 11234444444444421 122345568999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhhccChHHH
Q 000406 1471 SRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLASHLNGVYA 1547 (1560)
Q Consensus 1471 p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~ 1547 (1560)
|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++.. ....|.
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-~~~~~~ 228 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN-PQNEVT 228 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC-CCcHHH
Confidence 999999999999999999999999998643 7899999999999876 999999999999999999999863 333454
Q ss_pred HHH
Q 000406 1548 SLV 1550 (1560)
Q Consensus 1548 ~l~ 1550 (1560)
+.+
T Consensus 229 ~~~ 231 (241)
T PRK14250 229 KLF 231 (241)
T ss_pred HHH
Confidence 443
No 173
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.5e-41 Score=367.61 Aligned_cols=197 Identities=35% Similarity=0.506 Sum_probs=174.9
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.+++++|++.|.. ..||+||||+|++||.|+|+||||||||||+++|+|+..|++|+|.++|.++... ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4899999999964 4699999999999999999999999999999999999999999999999988543 3579
Q ss_pred EEEcCCCCCCC-ccHHHHHhcCCCCC------CHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000406 1393 ALVGQEPALFA-GTIRDNIALGNPKA------SWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIAR 1465 (1560)
Q Consensus 1393 ~~VpQdp~LF~-gTIreNL~~g~~~~------sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLAR 1465 (1560)
+||+|++.||+ -||++|+.++.... ..+.+.+.++.++|.+|-...|. +||||||||+||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~-----------qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPH-----------QLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCcc-----------ccChHHHHHHHHHH
Confidence 99999999998 59999999874321 23467888888988888777774 79999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhh-cCEEEEEeC--CEE
Q 000406 1466 AILKGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIRE-ANMIAVVRD--GAV 1528 (1560)
Q Consensus 1466 ALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~-aDrIlVLd~--G~I 1528 (1560)
||+.+|+||+||||.++||+.|...+|+-|.++- .++||++|||+++.... +|||+||.+ |+|
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 9999999999999999999999999999998864 35899999999998654 999999999 545
No 174
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-40 Score=383.61 Aligned_cols=219 Identities=29% Similarity=0.496 Sum_probs=187.0
Q ss_pred ccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCEecCC--CC
Q 000406 1312 LGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD-----PNQGKVMIEGVDLRE--IN 1384 (1560)
Q Consensus 1312 ~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~-----p~~G~I~IdGvdi~~--i~ 1384 (1560)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 5 ~~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (253)
T PRK14242 5 PKMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVD 81 (253)
T ss_pred cEEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccC
Confidence 35999999999963 359999999999999999999999999999999999975 589999999999875 34
Q ss_pred HHHHhhceEEEcCCCCCCCccHHHHHhcCCC--CC-----CHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHH
Q 000406 1385 VKWLRKQTALVGQEPALFAGTIRDNIALGNP--KA-----SWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQ 1457 (1560)
Q Consensus 1385 l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~~-----sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQ 1457 (1560)
...+|+.++|+||++.+|..|++||+.++.. .. ..+++.++++.+++.+.+. ........+|||||
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq 154 (253)
T PRK14242 82 VVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLSGGQ 154 (253)
T ss_pred HHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCHHH
Confidence 5678899999999999999999999986421 11 1234555666665543332 22345566899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHH
Q 000406 1458 KQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHET 1536 (1560)
Q Consensus 1458 rQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~e 1536 (1560)
|||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||+|++|++|+|++.|++++
T Consensus 155 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 234 (253)
T PRK14242 155 QQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQ 234 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988767899999999999865 99999999999999999999
Q ss_pred HHhh
Q 000406 1537 LLAS 1540 (1560)
Q Consensus 1537 Ll~~ 1540 (1560)
+.+.
T Consensus 235 ~~~~ 238 (253)
T PRK14242 235 IFTR 238 (253)
T ss_pred HHcC
Confidence 9863
No 175
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-40 Score=379.81 Aligned_cols=217 Identities=33% Similarity=0.537 Sum_probs=183.5
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccH---HHHhc
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQV---KWLRT 749 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~---~~lr~ 749 (1560)
|+++|++++|+. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 478999999963 459999999999999999999999999999999999999999999999999877654 46778
Q ss_pred cEEEEecCCcCccc-cHHHHHhcCCC---CCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHH
Q 000406 750 QIGMVGQEPILFAT-SILENVLMGKE---NATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARA 825 (1560)
Q Consensus 750 ~i~~v~Q~~~lf~~-Tv~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARA 825 (1560)
.|+||+|++.+|+. ||+||+.++.. ....++..+. +.+.++.+ |+.........+||||||||++||||
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~ia~a 150 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREI-----VLEKLEAV--GLRGAEDLYPAELSGGMKKRVALARA 150 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHH-----HHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 89999999999986 99999987532 1122222111 12234443 45445566778999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 826 MIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 826 l~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
|+.+|+||||||||++||+.++..+.+.|+++. .|+|||+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 151 LALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 999999999999999999999999999999874 38999999999999876 999999999999999999887653
No 176
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=393.69 Aligned_cols=221 Identities=28% Similarity=0.456 Sum_probs=187.7
Q ss_pred cEEEEEEEEEcCCCC--CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCc-------
Q 000406 672 KIEFKGVTFAYPSRP--ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSL------- 742 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~--~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~------- 742 (1560)
.|+++|++|+|+... ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.+.
T Consensus 21 ~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~ 100 (320)
T PRK13631 21 ILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELI 100 (320)
T ss_pred eEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccccc
Confidence 599999999997421 23599999999999999999999999999999999999999999999999998653
Q ss_pred ---------cHHHHhccEEEEecCC--cCccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCC-cccCCC
Q 000406 743 ---------QVKWLRTQIGMVGQEP--ILFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYD-TQVGDR 808 (1560)
Q Consensus 743 ---------~~~~lr~~i~~v~Q~~--~lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~-t~~~~~ 808 (1560)
....+|++|+||+|+| .+|+.||+|||.++... .+.++..+ .+.++++.+ |++ ...++.
T Consensus 101 ~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~ 173 (320)
T PRK13631 101 TNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK-----LAKFYLNKM--GLDDSYLERS 173 (320)
T ss_pred ccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHc--CCChhHhcCC
Confidence 3456788999999998 68889999999887421 22222211 122445554 564 456788
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHh-cCCcEEEEEecCccccc-cCCEEEEEeCCe
Q 000406 809 GTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKI-SVGRTTIVIAHRLATVK-NANTIVVLDQGS 886 (1560)
Q Consensus 809 g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~-~~~~tvi~itH~l~~i~-~~D~i~vl~~G~ 886 (1560)
+.+||||||||++|||||+++|+||||||||++||+.+++.+.+.|+++ .+|+|+|+|||+++.+. .||+|++|++|+
T Consensus 174 ~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~ 253 (320)
T PRK13631 174 PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGK 253 (320)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 8999999999999999999999999999999999999999999999877 35899999999999875 599999999999
Q ss_pred EEEecChhhHhhh
Q 000406 887 VVEIGNHRQLLER 899 (1560)
Q Consensus 887 iv~~G~~~~l~~~ 899 (1560)
+++.|+++++...
T Consensus 254 i~~~g~~~~~~~~ 266 (320)
T PRK13631 254 ILKTGTPYEIFTD 266 (320)
T ss_pred EEEeCCHHHHhcC
Confidence 9999999988653
No 177
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.1e-40 Score=398.35 Aligned_cols=217 Identities=30% Similarity=0.443 Sum_probs=186.0
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.++. ++.+
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999963 3589999999999999999999999999999999999999999999999999887764 6789
Q ss_pred EEEcCCCCCCC-ccHHHHHhcCCC--CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000406 1393 ALVGQEPALFA-GTIRDNIALGNP--KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIAR 1465 (1560)
Q Consensus 1393 ~~VpQdp~LF~-gTIreNL~~g~~--~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLAR 1465 (1560)
+||+|++.||+ .|++|||.++.. ..+. +++.++++..++. ........+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~-----------~~~~~~~~~LSgGq~QRvaLAR 147 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLP-----------GSERKYPGQLSGGQQQRVALAR 147 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-----------chhhCChhhCCHHHHHHHHHHH
Confidence 99999999996 699999998632 1222 2344444444443 3344455689999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhhcc
Q 000406 1466 AILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLASHL 1542 (1560)
Q Consensus 1466 ALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~~~ 1542 (1560)
||+++|++||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+|++.|++++++++ .
T Consensus 148 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~-p 226 (353)
T TIGR03265 148 ALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH-P 226 (353)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC-C
Confidence 99999999999999999999999999999998754 6899999999999865 999999999999999999999974 3
Q ss_pred ChHH
Q 000406 1543 NGVY 1546 (1560)
Q Consensus 1543 ~g~y 1546 (1560)
...|
T Consensus 227 ~~~~ 230 (353)
T TIGR03265 227 ATPF 230 (353)
T ss_pred CCHH
Confidence 4344
No 178
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-40 Score=380.41 Aligned_cols=210 Identities=33% Similarity=0.494 Sum_probs=179.4
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 789999999963 359999999999999999999999999999999999999999999999999876653 367899
Q ss_pred EEcCCCCCCC-ccHHHHHhcCCCC--C----CH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 000406 1394 LVGQEPALFA-GTIRDNIALGNPK--A----SW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIA 1462 (1560)
Q Consensus 1394 ~VpQdp~LF~-gTIreNL~~g~~~--~----sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLa 1462 (1560)
||||+|.+|. .|++||+.++... . .. +++.++++..++.+ .......+||||||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDW-----------LADRYPAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChh-----------hhhcChhhCCHHHHHHHH
Confidence 9999999986 5999999875321 1 11 22334444444433 333344579999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1463 IARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1463 LARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 6899999999998765 99999999999999999999986
No 179
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.3e-40 Score=377.12 Aligned_cols=219 Identities=50% Similarity=0.847 Sum_probs=195.0
Q ss_pred CcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHh
Q 000406 669 VSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLR 748 (1560)
Q Consensus 669 ~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr 748 (1560)
..+.|+++|++++|++....++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+....+
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 35679999999999753234699999999999999999999999999999999999999999999999998777767778
Q ss_pred ccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhcc
Q 000406 749 TQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIK 828 (1560)
Q Consensus 749 ~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~ 828 (1560)
+.++|++|++.+|+.|++||+.++.......++.+.+....+.++++.+|.|+++.++..+.+||||||||++|||||++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 88999999999999999999998754434444444445556778899998899888899999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeE
Q 000406 829 DPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSV 887 (1560)
Q Consensus 829 ~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~i 887 (1560)
+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999988667999999999999977999999999974
No 180
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.1e-40 Score=397.46 Aligned_cols=211 Identities=29% Similarity=0.435 Sum_probs=180.7
Q ss_pred ccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHH----hhceEEEcCCCCCCC-
Q 000406 1329 VTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWL----RKQTALVGQEPALFA- 1403 (1560)
Q Consensus 1329 ~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~L----R~~I~~VpQdp~LF~- 1403 (1560)
+.+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|+|||.++...+...+ |+.|+||||++.||+
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 459999999999999999999999999999999999999999999999999999998887 789999999999997
Q ss_pred ccHHHHHhcCCC--CCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEe
Q 000406 1404 GTIRDNIALGNP--KAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLD 1477 (1560)
Q Consensus 1404 gTIreNL~~g~~--~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILD 1477 (1560)
.||+|||.++.. ..+ .+++.++++.+++..+.. ....+||||||||++|||||+++|+|||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~-----------~~p~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEH-----------RYPDELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhh-----------CChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 599999987532 112 244556666666654443 444579999999999999999999999999
Q ss_pred CCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhhccChHHHHHH
Q 000406 1478 EASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLASHLNGVYASLV 1550 (1560)
Q Consensus 1478 EaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~~l~ 1550 (1560)
||||+||+.+.+.+++.|+++. .++|+|+|||+++.+.. ||||++|++|+|++.|++++++++..+.....++
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~~~~~ 230 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYVEEFI 230 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHHHHHh
Confidence 9999999999999999999874 37899999999998755 9999999999999999999999743333333443
No 181
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=386.62 Aligned_cols=212 Identities=32% Similarity=0.527 Sum_probs=185.9
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
-|+++||+++|+.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+++++
T Consensus 4 ~l~~~~l~~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKDG--TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCCC--CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 48999999999632 3599999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEcCCC--CCCCccHHHHHhcCCC--CCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000406 1393 ALVGQEP--ALFAGTIRDNIALGNP--KAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIA 1464 (1560)
Q Consensus 1393 ~~VpQdp--~LF~gTIreNL~~g~~--~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLA 1464 (1560)
+||||+| .+|..|+++|+.++.. ..+ .+++.++++.+++.++....| ..||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHH
Confidence 9999998 6888999999987521 122 234566666667665544433 37999999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1465 RAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1465 RALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
|||+.+|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 99999999999999999999999999999999874 47899999999999854 999999999999999998754
No 182
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-40 Score=385.40 Aligned_cols=217 Identities=31% Similarity=0.520 Sum_probs=184.0
Q ss_pred EEEEEEEEEcCCCC--CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCC--HHHHh
Q 000406 1314 IELKMVTFTYPSRP--EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREIN--VKWLR 1389 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~--~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~--l~~LR 1389 (1560)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997421 136999999999999999999999999999999999999999999999999998754 45788
Q ss_pred hceEEEcCCC--CCCCccHHHHHhcCCC--CCCHHH----HHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000406 1390 KQTALVGQEP--ALFAGTIRDNIALGNP--KASWAE----IEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRI 1461 (1560)
Q Consensus 1390 ~~I~~VpQdp--~LF~gTIreNL~~g~~--~~sd~e----I~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRL 1461 (1560)
++|+||||+| .+|+.|++|||.++.. ..+.++ +.++++.+++. +.+........||||||||+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qrv 153 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRRV 153 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHHH
Confidence 9999999998 5789999999987521 233333 33444444432 01234455568999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHh-hcCEEEEEeCCEEEEecCHHHHH
Q 000406 1462 AIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIR-EANMIAVVRDGAVVEYGSHETLL 1538 (1560)
Q Consensus 1462 aLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~-~aDrIlVLd~G~IvE~Gt~~eLl 1538 (1560)
+|||||+.+|+||||||||++||+.+...+.+.|+++.+ ++|||+|||+++.+. .||||++|++|++++.|++++++
T Consensus 154 ~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13637 154 AIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVF 233 (287)
T ss_pred HHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999998753 689999999999985 49999999999999999999987
Q ss_pred h
Q 000406 1539 A 1539 (1560)
Q Consensus 1539 ~ 1539 (1560)
+
T Consensus 234 ~ 234 (287)
T PRK13637 234 K 234 (287)
T ss_pred h
Confidence 5
No 183
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-40 Score=381.94 Aligned_cols=218 Identities=28% Similarity=0.437 Sum_probs=186.4
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCEecCC--CCH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP-----NQGKVMIEGVDLRE--INV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p-----~~G~I~IdGvdi~~--i~l 1385 (1560)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .+.
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 5999999999963 3599999999999999999999999999999999999997 48999999999863 345
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCCC--C-CC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGNP--K-AS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~-~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
..+|+.++||||++.+|..|++|||.++.. . .. ++.+.++++.+++.+.+ ++.+++ ...+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~----~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDKLNT----NALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHHHhC----CcccCCHHHH
Confidence 677899999999999999999999987521 1 11 23455666666553322 223444 4557999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|+|++.|+++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998777899999999999865 999999999999999999999
Q ss_pred Hhh
Q 000406 1538 LAS 1540 (1560)
Q Consensus 1538 l~~ 1540 (1560)
.++
T Consensus 237 ~~~ 239 (254)
T PRK14273 237 FFN 239 (254)
T ss_pred HhC
Confidence 863
No 184
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.4e-40 Score=379.32 Aligned_cols=221 Identities=25% Similarity=0.461 Sum_probs=184.2
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHH-hhce
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWL-RKQT 1392 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~L-R~~I 1392 (1560)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+ |+.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 478999999963 359999999999999999999999999999999999999999999999999988877654 5679
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCCCCCCHHHH-------HHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000406 1393 ALVGQEPALFAG-TIRDNIALGNPKASWAEI-------EEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIA 1464 (1560)
Q Consensus 1393 ~~VpQdp~LF~g-TIreNL~~g~~~~sd~eI-------~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLA 1464 (1560)
+|+||++.+|.+ |++|||.++........+ ........+.+.+..+ |++.........||||||||++||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 155 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIA 155 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHH
Confidence 999999999986 999999875321100000 0000111233444444 455555566678999999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1465 RAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1465 RALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|||+.+|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 99999999999999999999999999999999865 67899999999999876 99999999999999999999875
No 185
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-40 Score=379.92 Aligned_cols=213 Identities=32% Similarity=0.504 Sum_probs=181.6
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCC---HHHHhh
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREIN---VKWLRK 1390 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~---l~~LR~ 1390 (1560)
++++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ ...+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPNG--KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCCc--cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 4789999999641 45999999999999999999999999999999999999999999999999998876 456788
Q ss_pred ceEEEcCCCCCCC-ccHHHHHhcCCCC--------------CCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCCh
Q 000406 1391 QTALVGQEPALFA-GTIRDNIALGNPK--------------ASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSG 1455 (1560)
Q Consensus 1391 ~I~~VpQdp~LF~-gTIreNL~~g~~~--------------~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSG 1455 (1560)
.++|+||++.+|. .|+++|+.++... ...+++.++++..+ ++......+.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVG-----------LLDKAYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcC-----------ChhhhCCCcccCCH
Confidence 9999999998887 6999999864211 01123333444433 33334445668999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHh-hcCEEEEEeCCEEEEec
Q 000406 1456 GQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIR-EANMIAVVRDGAVVEYG 1532 (1560)
Q Consensus 1456 GQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~-~aDrIlVLd~G~IvE~G 1532 (1560)
|||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+. .||+|++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 99999999999999999999999999999999999999999875 3789999999999998 49999999999999999
Q ss_pred CHHHHHh
Q 000406 1533 SHETLLA 1539 (1560)
Q Consensus 1533 t~~eLl~ 1539 (1560)
+++++.+
T Consensus 228 ~~~~~~~ 234 (241)
T cd03256 228 PPAELTD 234 (241)
T ss_pred CHHHhhH
Confidence 9998743
No 186
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-41 Score=390.88 Aligned_cols=219 Identities=32% Similarity=0.536 Sum_probs=195.6
Q ss_pred ccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhc
Q 000406 1312 LGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQ 1391 (1560)
Q Consensus 1312 ~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~ 1391 (1560)
..|+++||+.+|. +..+|+||||+|++||.++++||||||||||+++|+||..|++|+|.+||.|+..++++ ++.
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~ 78 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRP 78 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hcc
Confidence 3599999999996 35699999999999999999999999999999999999999999999999999999987 579
Q ss_pred eEEEcCCCCCCC-ccHHHHHhcCCC---CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000406 1392 TALVGQEPALFA-GTIRDNIALGNP---KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAI 1463 (1560)
Q Consensus 1392 I~~VpQdp~LF~-gTIreNL~~g~~---~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaL 1463 (1560)
|++|+|+..||+ .||+|||.||.. ...+ +.+.++++.+++.++-...| .+|||||+||+||
T Consensus 79 ig~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----------~qLSGGQqQRVAL 147 (352)
T COG3842 79 IGMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP-----------HQLSGGQQQRVAL 147 (352)
T ss_pred cceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh-----------hhhChHHHHHHHH
Confidence 999999999997 699999999853 1222 36788999999988776665 4799999999999
Q ss_pred HHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000406 1464 ARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLAS 1540 (1560)
Q Consensus 1464 ARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~ 1540 (1560)
||||..+|++||||||-|+||..-...++.-|+++. .|.|.|+|||+-+.... +|||+||++|+|...|+|+|+..+
T Consensus 148 ARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~ 227 (352)
T COG3842 148 ARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER 227 (352)
T ss_pred HHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC
Confidence 999999999999999999999999999999998764 36899999999998754 999999999999999999999984
Q ss_pred ccChHHH
Q 000406 1541 HLNGVYA 1547 (1560)
Q Consensus 1541 ~~~g~y~ 1547 (1560)
....|-
T Consensus 228 -P~~~fV 233 (352)
T COG3842 228 -PATRFV 233 (352)
T ss_pred -cchHHH
Confidence 455553
No 187
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-40 Score=380.68 Aligned_cols=220 Identities=31% Similarity=0.533 Sum_probs=188.3
Q ss_pred CccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCEecCC--C
Q 000406 1311 PLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD-----PNQGKVMIEGVDLRE--I 1383 (1560)
Q Consensus 1311 ~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~-----p~~G~I~IdGvdi~~--i 1383 (1560)
.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 446999999999963 359999999999999999999999999999999999986 589999999999863 4
Q ss_pred CHHHHhhceEEEcCCCCCCCccHHHHHhcCCC---CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChH
Q 000406 1384 NVKWLRKQTALVGQEPALFAGTIRDNIALGNP---KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGG 1456 (1560)
Q Consensus 1384 ~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~---~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGG 1456 (1560)
+...+|++++|+||++.+|+.|+++|+.++.. ..+. ++++++++.+++.+.+ ...+.....+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEV-------KDKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhh-------HHHHhcCCCCCCHH
Confidence 56678999999999999999999999986521 1222 3455566665553222 23344556789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHH
Q 000406 1457 QKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHE 1535 (1560)
Q Consensus 1457 QrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~ 1535 (1560)
||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988777899999999999865 9999999999999999999
Q ss_pred HHHhh
Q 000406 1536 TLLAS 1540 (1560)
Q Consensus 1536 eLl~~ 1540 (1560)
++++.
T Consensus 241 ~~~~~ 245 (260)
T PRK10744 241 TIFTK 245 (260)
T ss_pred HHHhC
Confidence 99863
No 188
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.4e-40 Score=375.22 Aligned_cols=211 Identities=27% Similarity=0.411 Sum_probs=179.5
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++||++.|+.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.... ..+|++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEE
Confidence 5799999999642 146999999999999999999999999999999999999999999999999987643 56788999
Q ss_pred EEcCCCCCC-CccHHHHHhcCCC--CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000406 1394 LVGQEPALF-AGTIRDNIALGNP--KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARA 1466 (1560)
Q Consensus 1394 ~VpQdp~LF-~gTIreNL~~g~~--~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARA 1466 (1560)
|+||++.+| ..|+++|+.++.. ..+. +++.++++..++.+. +++ ...+||||||||++||||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~----~~~~LS~G~~qrv~la~a 147 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDK-------ANK----RARTLSGGMKRKLSLAIA 147 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-------HhC----hhhhCCHHHHHHHHHHHH
Confidence 999999998 5799999986421 1122 234444544444332 233 334799999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1467 ILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1467 LLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
|+++|++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999999999999988777999999999999875 999999999999999998875
No 189
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-40 Score=385.96 Aligned_cols=215 Identities=31% Similarity=0.530 Sum_probs=189.0
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
-++++||+++|+.. .+++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+++.|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 48999999999642 34599999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEEcCCC--CCCCccHHHHHhcCCC--CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000406 1393 ALVGQEP--ALFAGTIRDNIALGNP--KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIA 1464 (1560)
Q Consensus 1393 ~~VpQdp--~LF~gTIreNL~~g~~--~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLA 1464 (1560)
+|+||++ .+++.|++|||.++.. ..+. +++.++++..++.+++...| ..||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 5677899999987521 1222 34566666666666555443 47999999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000406 1465 RAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1465 RALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|||+.+|+||||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+..||+|++|++|++++.|+++++++
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFK 229 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhc
Confidence 999999999999999999999999999999998764 689999999999998899999999999999999999875
No 190
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.1e-40 Score=378.93 Aligned_cols=216 Identities=33% Similarity=0.529 Sum_probs=184.9
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCC-----ccEEEECCEecCCC--CHH
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPN-----QGKVMIEGVDLREI--NVK 1386 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~-----~G~I~IdGvdi~~i--~l~ 1386 (1560)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.++... +..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999963 35999999999999999999999999999999999999998 99999999998763 456
Q ss_pred HHhhceEEEcCCCCCCCccHHHHHhcCCC--C-CC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000406 1387 WLRKQTALVGQEPALFAGTIRDNIALGNP--K-AS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQ 1459 (1560)
Q Consensus 1387 ~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~-~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQ 1459 (1560)
.+|+.++||||++.+|..|++||+.++.. . .+ .+++.++++..++.+++. ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHH
Confidence 77889999999999999999999986421 1 12 133455555555542221 2233445689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHH
Q 000406 1460 RIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLL 1538 (1560)
Q Consensus 1460 RLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl 1538 (1560)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988767899999999998865 9999999999999999999998
Q ss_pred h
Q 000406 1539 A 1539 (1560)
Q Consensus 1539 ~ 1539 (1560)
.
T Consensus 232 ~ 232 (247)
T TIGR00972 232 T 232 (247)
T ss_pred h
Confidence 6
No 191
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1e-40 Score=375.17 Aligned_cols=203 Identities=30% Similarity=0.489 Sum_probs=173.9
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHH---HHhh
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVK---WLRK 1390 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~---~LR~ 1390 (1560)
|+++||+++|++. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 7899999999642 23599999999999999999999999999999999999999999999999999876543 4788
Q ss_pred ceEEEcCCCCCCC-ccHHHHHhcCCC------CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000406 1391 QTALVGQEPALFA-GTIRDNIALGNP------KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAI 1463 (1560)
Q Consensus 1391 ~I~~VpQdp~LF~-gTIreNL~~g~~------~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaL 1463 (1560)
.++|+||++.+|. .|++||+.++.. ...++++.++++..++.++.... ..+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHAL-----------PMQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHHHHHH
Confidence 9999999999887 599999986411 11234566666666665544333 34799999999999
Q ss_pred HHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEE
Q 000406 1464 ARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAV 1528 (1560)
Q Consensus 1464 ARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~I 1528 (1560)
||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+|
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999864 47899999999999975 899999999975
No 192
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.9e-40 Score=398.47 Aligned_cols=213 Identities=28% Similarity=0.494 Sum_probs=190.0
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+++...++++|
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 3899999999963 4699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCCC-CCccHHHHHhcCCC----------CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000406 1393 ALVGQEPAL-FAGTIRDNIALGNP----------KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRI 1461 (1560)
Q Consensus 1393 ~~VpQdp~L-F~gTIreNL~~g~~----------~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRL 1461 (1560)
+||||++.+ |+.|++||+.++.. ..+.+.+.++++.+++.++..+ ...+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~-----------~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADR-----------PVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHH
Confidence 999999987 67899999987631 1123456777777777655433 2347999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1462 AIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1462 aLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
+|||||+++|+||||||||++||+.+...+++.|+++. +++|+|+++|+++.+.. ||||++|++|++++.|++++++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999999875 47899999999999955 99999999999999999999885
No 193
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-40 Score=384.86 Aligned_cols=219 Identities=29% Similarity=0.516 Sum_probs=185.5
Q ss_pred EEEEEEEEEcCCCC--CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCC----CHHH
Q 000406 1314 IELKMVTFTYPSRP--EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREI----NVKW 1387 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~--~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i----~l~~ 1387 (1560)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||+++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 79999999996422 13699999999999999999999999999999999999999999999999999754 3467
Q ss_pred HhhceEEEcCCC--CCCCccHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCCccc-cccCCCCCCChHHHHHHH
Q 000406 1388 LRKQTALVGQEP--ALFAGTIRDNIALGNP--KASWAEIEEAAEEAYIHKFISSLPQGYET-QVGESGVQLSGGQKQRIA 1462 (1560)
Q Consensus 1388 LR~~I~~VpQdp--~LF~gTIreNL~~g~~--~~sd~eI~~al~~a~l~~~I~~Lp~Gldt-~Vge~G~~LSGGQrQRLa 1462 (1560)
+|++|+||||+| .+|..|++|||.++.. ..+.++..+. +.+.+..+ |+++ .....+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 899999999998 6888999999987521 2233333222 23334433 5653 344567789999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHh-hcCEEEEEeCCEEEEecCHHHHHh
Q 000406 1463 IARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIR-EANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1463 LARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~-~aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|||||+.+|+||||||||++||+.+...+.+.|+++. .++|||+|||+++.+. .||||++|++|+|++.|+++++++
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999874 4789999999999986 499999999999999999999886
No 194
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=3e-40 Score=373.06 Aligned_cols=217 Identities=27% Similarity=0.419 Sum_probs=179.6
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHH-hhce
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWL-RKQT 1392 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~L-R~~I 1392 (1560)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+ |+.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 579999999963 359999999999999999999999999999999999999999999999999988877654 6789
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCC
Q 000406 1393 ALVGQEPALFAG-TIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGS 1471 (1560)
Q Consensus 1393 ~~VpQdp~LF~g-TIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p 1471 (1560)
+|+||++.+|.+ |++||+.++.......+..+. +.+.+..++ +++.........||||||||++|||||+++|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKAR-----LERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHH-----HHHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 999999875322211111111 111122111 1222333445579999999999999999999
Q ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1472 RVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1472 ~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999875 47899999999999866 99999999999999999988764
No 195
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.6e-40 Score=395.25 Aligned_cols=212 Identities=32% Similarity=0.493 Sum_probs=183.8
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++||+++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .++.|
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 3889999999963 359999999999999999999999999999999999999999999999999987654 46789
Q ss_pred EEEcCCCCCCC-ccHHHHHhcCCC------CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000406 1393 ALVGQEPALFA-GTIRDNIALGNP------KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRI 1461 (1560)
Q Consensus 1393 ~~VpQdp~LF~-gTIreNL~~g~~------~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRL 1461 (1560)
+||||++.+|+ .|++||+.++.. ..+. +++.++++..++.++... ....||||||||+
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~LSgGq~QRv 145 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADR-----------YPAQLSGGQKQRV 145 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHHH
Confidence 99999999997 599999998632 1122 344555555555444333 3457999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHH
Q 000406 1462 AIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLL 1538 (1560)
Q Consensus 1462 aLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl 1538 (1560)
+|||||+++|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+.. ||||++|++|+|++.|++++++
T Consensus 146 alArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 146 ALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999999998754 6899999999999766 9999999999999999999999
Q ss_pred hh
Q 000406 1539 AS 1540 (1560)
Q Consensus 1539 ~~ 1540 (1560)
++
T Consensus 226 ~~ 227 (353)
T PRK10851 226 RE 227 (353)
T ss_pred hC
Confidence 74
No 196
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-40 Score=386.91 Aligned_cols=216 Identities=28% Similarity=0.445 Sum_probs=182.3
Q ss_pred EEEEEEEEEcCCCC--CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCC----CCHHH
Q 000406 1314 IELKMVTFTYPSRP--EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLRE----INVKW 1387 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~--~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~----i~l~~ 1387 (1560)
|+++||+|+|+... ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .....
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999996321 1259999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhhceEEEcCCC--CCCCccHHHHHhcCCC--CCCHHH----HHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000406 1388 LRKQTALVGQEP--ALFAGTIRDNIALGNP--KASWAE----IEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQ 1459 (1560)
Q Consensus 1388 LR~~I~~VpQdp--~LF~gTIreNL~~g~~--~~sd~e----I~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQ 1459 (1560)
+|+.++||+|+| .+|..|+.||+.++.. ..+.++ +.++++.+++.+ ........+|||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~----------~~~~~~~~~LSgGqkq 151 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLAD----------EFWEKSPFELSGGQMR 151 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhccCCcccCCHHHHH
Confidence 899999999998 7999999999987632 123333 333343333321 1223445689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHh-hcCEEEEEeCCEEEEecCHHHH
Q 000406 1460 RIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIR-EANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1460 RLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~-~aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
|++|||||+.+|+||||||||++||+.+.+.+.+.|+++. +++|||+|||+++.+. .||||++|++|++++.|+++++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~ 231 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDV 231 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999998864 4789999999999885 5999999999999999999998
Q ss_pred Hh
Q 000406 1538 LA 1539 (1560)
Q Consensus 1538 l~ 1539 (1560)
..
T Consensus 232 ~~ 233 (288)
T PRK13643 232 FQ 233 (288)
T ss_pred Hc
Confidence 75
No 197
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-37 Score=351.03 Aligned_cols=470 Identities=20% Similarity=0.229 Sum_probs=346.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccccCChHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 000406 1040 LVGLGFGCIIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLM 1119 (1560)
Q Consensus 1040 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~Lr~~l~~~ll~~~~~ffd~~~~~~G~il~R~s~Di~~i~~~l~~~l~~~l~ 1119 (1560)
++++..+..+...+........++.+..++|.++.++++..|+.-++ +-..++++.++++|+.++. +-...++.+.+
T Consensus 54 f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerie--r~~~~rlla~L~~Dvr~IS-f~~s~lp~~~q 130 (546)
T COG4615 54 FLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIE--RLGSARLLAGLTSDVRNIS-FAFSRLPELVQ 130 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH--Hhcccchhhhhccccccee-ehHhhhHHHHH
Confidence 34444444455556666777889999999999999999999987654 7899999999999999987 55667788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHhcchhhhhhhHHHHHHHHHHHhcchhHHHhccchHHH--
Q 000406 1120 GLSSAAVGLGVSLVLNWRLTLVAAALTPFTLGASY-LSLIINVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQI-- 1196 (1560)
Q Consensus 1120 ~~~~~i~~l~~~~~~~~~l~lv~l~~ipl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIraf~~e~~~-- 1196 (1560)
+.+..+++++.+.++++.+.++.++.+.+.+...+ .+.+........++...+..+..+..++|.+.++..+.-.+.
T Consensus 131 a~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h 210 (546)
T COG4615 131 AIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVH 210 (546)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHH
Confidence 88888889999999999887776666655554433 333444444444566677788888889999998876543222
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHHHHHHHHHhhHH
Q 000406 1197 INSFDKALSEPKKKSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAP 1276 (1560)
Q Consensus 1197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~s~g~~~~~~~~~~~~~~~i~~l~~~~~ 1276 (1560)
.+.+...-....+...+..........+++.+++....+.+|+...+. .-+......+.+.+.+.-.|+.+.++..+
T Consensus 211 ~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~---w~st~~a~tivlvlLflr~pL~s~vgilP 287 (546)
T COG4615 211 NNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLG---WASTNVAATIVLVLLFLRTPLLSAVGILP 287 (546)
T ss_pred hhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cchhhHHHHHHHHHHHHhhHHHHHHhhhh
Confidence 222222222222211111111123334444444444455555544332 22333333355555666779999999999
Q ss_pred HHHHHHHHHHHHHHHhccCCcccccc-ccccCCCCCccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCH
Q 000406 1277 DTSMAATAIPAVLQITKRKPLIDNVK-GRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGK 1355 (1560)
Q Consensus 1277 ~~~~~~~s~~ri~~i~~~~~~~~~~~-~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGK 1355 (1560)
....+.++.+++.++...++..+-.. ...+.| ..||++||.|+|+... --+..||++|++||.|=|+|.|||||
T Consensus 288 ~l~~AqvA~~kiakle~~~~~a~~~~~q~~p~~---~~lelrnvrfay~~~~--FhvgPiNl~ikrGelvFliG~NGsGK 362 (546)
T COG4615 288 TLLTAQVAFNKIAKLELAPYKADFPRPQAFPDW---KTLELRNVRFAYQDNA--FHVGPINLTIKRGELVFLIGGNGSGK 362 (546)
T ss_pred HHHHHHHHHHHHHHhhcCCccccCCCCCcCCcc---cceeeeeeeeccCccc--ceecceeeEEecCcEEEEECCCCCcH
Confidence 99999999999999876433222111 111222 3699999999997542 45889999999999999999999999
Q ss_pred HHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHH
Q 000406 1356 STVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFI 1435 (1560)
Q Consensus 1356 STLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I 1435 (1560)
||++++|.|+|.|++|+|++||.+++.-++++.|+-++-|+-|-+||+.++- ++..++.+.+..-++...+....
T Consensus 363 ST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll~-----~e~~as~q~i~~~LqrLel~~kt 437 (546)
T COG4615 363 STLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLLG-----PEGKASPQLIEKWLQRLELAHKT 437 (546)
T ss_pred HHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhhC-----CccCCChHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999999999999999999999999997651 12236677777766666554433
Q ss_pred HhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHh--cCCceEEEEecChHH
Q 000406 1436 SSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKV--SKRATTIVVAHRLST 1513 (1560)
Q Consensus 1436 ~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~--~~~~TvI~IAHRlst 1513 (1560)
++.+|==++ ..||-|||.|+|+--|++-+.+|++|||=-+--||.=.+...+.+--. ..|+||+.|||+-.-
T Consensus 438 -sl~d~~fs~-----~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~Y 511 (546)
T COG4615 438 -SLNDGRFSN-----LKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHY 511 (546)
T ss_pred -cccCCcccc-----cccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchh
Confidence 233332222 359999999999999999999999999999999999999998887543 358999999999999
Q ss_pred HhhcCEEEEEeCCEEEEe
Q 000406 1514 IREANMIAVVRDGAVVEY 1531 (1560)
Q Consensus 1514 i~~aDrIlVLd~G~IvE~ 1531 (1560)
-..|||++.|++|+++|.
T Consensus 512 F~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 512 FIHADRLLEMRNGQLSEL 529 (546)
T ss_pred hhhHHHHHHHhcCceeec
Confidence 999999999999999986
No 198
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-40 Score=377.88 Aligned_cols=218 Identities=31% Similarity=0.518 Sum_probs=183.2
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
++++||+++|+.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4789999999641 35999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEcCCCCCCC-ccHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCCccc--cccCCCCCCChHHHHHHHHHHHHc
Q 000406 1394 LVGQEPALFA-GTIRDNIALGNP--KASWAEIEEAAEEAYIHKFISSLPQGYET--QVGESGVQLSGGQKQRIAIARAIL 1468 (1560)
Q Consensus 1394 ~VpQdp~LF~-gTIreNL~~g~~--~~sd~eI~~al~~a~l~~~I~~Lp~Gldt--~Vge~G~~LSGGQrQRLaLARALL 1468 (1560)
|+||++.+|. .|++||+.++.. ..+.++. ...+.+.+..+ |+.. .....+.+||||||||++|||||+
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~ 151 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKI-----RERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALA 151 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHh
Confidence 9999999986 699999986421 1121111 11122333333 2332 334556789999999999999999
Q ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000406 1469 KGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLAS 1540 (1560)
Q Consensus 1469 r~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~ 1540 (1560)
++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.++
T Consensus 152 ~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 152 ADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 99999999999999999999999999998753 7899999999998765 999999999999999999999763
No 199
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=3.4e-40 Score=377.87 Aligned_cols=212 Identities=30% Similarity=0.484 Sum_probs=180.2
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCH---HHHhh
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINV---KWLRK 1390 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l---~~LR~ 1390 (1560)
|+++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++. ..+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 689999999962 2359999999999999999999999999999999999999999999999999987654 34688
Q ss_pred ceEEEcCCCCCCC-ccHHHHHhcCCCC--------------CCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCCh
Q 000406 1391 QTALVGQEPALFA-GTIRDNIALGNPK--------------ASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSG 1455 (1560)
Q Consensus 1391 ~I~~VpQdp~LF~-gTIreNL~~g~~~--------------~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSG 1455 (1560)
.++|+||++.+|. .|++||+.++... ..++++.++++..++. .........|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLA-----------DKAYQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcH-----------hhhcCCcccCCH
Confidence 9999999998886 6999999864211 0112334444444443 333445568999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEec
Q 000406 1456 GQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYG 1532 (1560)
Q Consensus 1456 GQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~G 1532 (1560)
|||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDG 228 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999999999999998743 6899999999999865 9999999999999999
Q ss_pred CHHHHH
Q 000406 1533 SHETLL 1538 (1560)
Q Consensus 1533 t~~eLl 1538 (1560)
+++++.
T Consensus 229 ~~~~~~ 234 (243)
T TIGR02315 229 APSELD 234 (243)
T ss_pred CHHHhC
Confidence 999874
No 200
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.7e-39 Score=376.89 Aligned_cols=219 Identities=28% Similarity=0.482 Sum_probs=194.8
Q ss_pred CccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhh
Q 000406 1311 PLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRK 1390 (1560)
Q Consensus 1311 ~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~ 1390 (1560)
...|+++||++.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|
T Consensus 37 ~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g------------- 98 (282)
T cd03291 37 DNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG------------- 98 (282)
T ss_pred CCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------
Confidence 4469999999852 3599999999999999999999999999999999999999999999998
Q ss_pred ceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccC
Q 000406 1391 QTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKG 1470 (1560)
Q Consensus 1391 ~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~ 1470 (1560)
.++|+||++.+|++|++||+.++.. ....++.++++.+++.+.+..+|.++++.+++.+..||||||||++|||||+++
T Consensus 99 ~i~yv~q~~~l~~~tv~enl~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~ 177 (282)
T cd03291 99 RISFSSQFSWIMPGTIKENIIFGVS-YDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKD 177 (282)
T ss_pred EEEEEeCcccccccCHHHHhhcccc-cCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcC
Confidence 3999999999999999999987532 234456777888888999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHH-HHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHhhccChHHHHH
Q 000406 1471 SRVLLLDEASSALDLESEKHVQDAL-RKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLASHLNGVYASL 1549 (1560)
Q Consensus 1471 p~ILILDEaTSaLD~~Te~~I~~~L-~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~~l 1549 (1560)
|+||||||||++||+.+...+.+.+ ++..+++|+|+|||+++.+..||+|++|++|++++.|+++++.+ ....|.+.
T Consensus 178 p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~--~~~~~~~~ 255 (282)
T cd03291 178 ADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQS--LRPDFSSK 255 (282)
T ss_pred CCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHh--cchHHHHH
Confidence 9999999999999999999998754 55556789999999999998899999999999999999999986 23455544
Q ss_pred H
Q 000406 1550 V 1550 (1560)
Q Consensus 1550 ~ 1550 (1560)
+
T Consensus 256 ~ 256 (282)
T cd03291 256 L 256 (282)
T ss_pred H
Confidence 4
No 201
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-40 Score=382.70 Aligned_cols=216 Identities=29% Similarity=0.491 Sum_probs=187.9
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
-|+++||+++|+.....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743234599999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEcCCC--CCCCccHHHHHhcCCC--CCCHHH----HHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000406 1393 ALVGQEP--ALFAGTIRDNIALGNP--KASWAE----IEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIA 1464 (1560)
Q Consensus 1393 ~~VpQdp--~LF~gTIreNL~~g~~--~~sd~e----I~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLA 1464 (1560)
+|+||+| .++..|+.|||.++.. ..+.++ +.++++.+++.++... ....||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTR-----------EPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhC-----------CcccCCHHHHHHHHHH
Confidence 9999998 4778899999986421 223333 3455555565544332 3457999999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000406 1465 RAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1465 RALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|||+++|+||||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+..||+|++|++|++++.|+++++++
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFA 229 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999998754 789999999999998899999999999999999999886
No 202
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-40 Score=380.63 Aligned_cols=219 Identities=30% Similarity=0.460 Sum_probs=187.5
Q ss_pred CccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCEecCC--C
Q 000406 1311 PLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP-----NQGKVMIEGVDLRE--I 1383 (1560)
Q Consensus 1311 ~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p-----~~G~I~IdGvdi~~--i 1383 (1560)
...|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 346999999999963 3599999999999999999999999999999999999975 89999999999875 3
Q ss_pred CHHHHhhceEEEcCCCCCCCccHHHHHhcCCC--CC--C----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCCh
Q 000406 1384 NVKWLRKQTALVGQEPALFAGTIRDNIALGNP--KA--S----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSG 1455 (1560)
Q Consensus 1384 ~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~~--s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSG 1455 (1560)
+...+|+.++|+||++.+|..|++||+.++.. .. + .+++.++++.+++.+.+. ......+..|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCH
Confidence 45678899999999999999999999986421 10 1 234556666666644332 223345568999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCH
Q 000406 1456 GQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSH 1534 (1560)
Q Consensus 1456 GQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~ 1534 (1560)
|||||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999988777899999999999965 899999999999999999
Q ss_pred HHHHh
Q 000406 1535 ETLLA 1539 (1560)
Q Consensus 1535 ~eLl~ 1539 (1560)
+++..
T Consensus 247 ~~~~~ 251 (267)
T PRK14235 247 EKMFT 251 (267)
T ss_pred HHHHh
Confidence 99986
No 203
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-40 Score=383.53 Aligned_cols=218 Identities=32% Similarity=0.482 Sum_probs=182.8
Q ss_pred EEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHH----hh
Q 000406 1315 ELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWL----RK 1390 (1560)
Q Consensus 1315 ~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~L----R~ 1390 (1560)
.++||++.|.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+ ++
T Consensus 26 ~~~~~~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTGQ---TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcCC---ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 46677777753 358999999999999999999999999999999999999999999999999988776543 46
Q ss_pred ceEEEcCCCCCCC-ccHHHHHhcCCC--CCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000406 1391 QTALVGQEPALFA-GTIRDNIALGNP--KAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAI 1463 (1560)
Q Consensus 1391 ~I~~VpQdp~LF~-gTIreNL~~g~~--~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaL 1463 (1560)
+++|+||++.+|. .|++||+.++.. ... ++++.++++..++.+++...| .+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHH
Confidence 7999999999885 699999986421 111 234556666666655544433 4799999999999
Q ss_pred HHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000406 1464 ARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLAS 1540 (1560)
Q Consensus 1464 ARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~ 1540 (1560)
||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|++++++++
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999998743 7899999999999865 999999999999999999999874
Q ss_pred ccChHHH
Q 000406 1541 HLNGVYA 1547 (1560)
Q Consensus 1541 ~~~g~y~ 1547 (1560)
....|.
T Consensus 252 -~~~~~~ 257 (269)
T cd03294 252 -PANDYV 257 (269)
T ss_pred -cCcHHH
Confidence 333344
No 204
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-40 Score=393.94 Aligned_cols=216 Identities=31% Similarity=0.488 Sum_probs=184.5
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...++. +++|
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5999999999963 4589999999999999999999999999999999999999999999999999876643 4689
Q ss_pred EEEecCCcCccc-cHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhcc
Q 000406 752 GMVGQEPILFAT-SILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIK 828 (1560)
Q Consensus 752 ~~v~Q~~~lf~~-Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~ 828 (1560)
+||+|++.+|+. ||+|||.|+... ...++..+. +++.++.+ |+....+..+.+|||||||||+|||||+.
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~-----v~~~l~~~--gl~~~~~r~~~~LSgGq~QRVaLARaL~~ 153 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQR-----VKEALELV--DLAGFEDRYVDQISGGQQQRVALARALIL 153 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHH-----HHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHHc
Confidence 999999999976 999999987431 122222111 12223332 45455567778999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 829 DPRILLLDEPTSALDSESESIVQQAIDKISV--GRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 829 ~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
+|+|||||||||+||+.++..+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|+|++.|+++++..+
T Consensus 154 ~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 154 KPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999998743 8999999999999865 999999999999999999998764
No 205
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=5e-40 Score=389.86 Aligned_cols=228 Identities=26% Similarity=0.382 Sum_probs=187.6
Q ss_pred cEEEEEEEEEcCCCC----------CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCC
Q 000406 1313 GIELKMVTFTYPSRP----------EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLRE 1382 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~----------~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~ 1382 (1560)
-|+++||+++|+.+. ...+|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 489999999996321 2469999999999999999999999999999999999999999999999999998
Q ss_pred CCHH---HHhhceEEEcCCC--CCC-CccHHHHHhcC----CCCCCHHHH----HHHHHHHhHHHHHHhCCCCccccccC
Q 000406 1383 INVK---WLRKQTALVGQEP--ALF-AGTIRDNIALG----NPKASWAEI----EEAAEEAYIHKFISSLPQGYETQVGE 1448 (1560)
Q Consensus 1383 i~l~---~LR~~I~~VpQdp--~LF-~gTIreNL~~g----~~~~sd~eI----~~al~~a~l~~~I~~Lp~Gldt~Vge 1448 (1560)
++.. .+|++|+||+|+| .|+ ..||.+||.++ .+..+.++. .++++.+++. +.....
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~----------~~~~~~ 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLL----------PNLINR 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCC----------hHHhcC
Confidence 8754 4678999999999 477 47999998642 112343333 3334444331 112334
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeC
Q 000406 1449 SGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRD 1525 (1560)
Q Consensus 1449 ~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~ 1525 (1560)
...+||||||||++|||||+.+|+||||||||++||+.+...|.+.|+++.+ +.|+|+|||+++.+.. ||||+||++
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 4568999999999999999999999999999999999999999999998754 7899999999999976 999999999
Q ss_pred CEEEEecCHHHHHhhccChHHHH-HHH
Q 000406 1526 GAVVEYGSHETLLASHLNGVYAS-LVR 1551 (1560)
Q Consensus 1526 G~IvE~Gt~~eLl~~~~~g~y~~-l~~ 1551 (1560)
|+|+|.|++++++++. ...|.+ ++.
T Consensus 238 G~ive~g~~~~i~~~~-~~py~~~l~~ 263 (331)
T PRK15079 238 GHAVELGTYDEVYHNP-LHPYTKALMS 263 (331)
T ss_pred CEEEEEcCHHHHHcCC-CCHHHHHHHh
Confidence 9999999999999743 334543 443
No 206
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=6.1e-40 Score=393.75 Aligned_cols=212 Identities=33% Similarity=0.546 Sum_probs=187.0
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++|++++|.+ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++..+++. ++.|
T Consensus 14 ~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 14 LVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred eEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5999999999963 3589999999999999999999999999999999999999999999999999887764 5789
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCCC--CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000406 1393 ALVGQEPALFAG-TIRDNIALGNP--KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIAR 1465 (1560)
Q Consensus 1393 ~~VpQdp~LF~g-TIreNL~~g~~--~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLAR 1465 (1560)
+||+|++.||+. ||+|||.++.. ..+. +++.++++..++.++....| .+||||||||+||||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999965 99999998632 1222 34566676667766655544 479999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000406 1466 AILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLAS 1540 (1560)
Q Consensus 1466 ALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~ 1540 (1560)
||+++|+|||||||||+||..+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|++++++.+
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999999998754 6899999999999765 999999999999999999999974
No 207
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.2e-40 Score=375.49 Aligned_cols=214 Identities=36% Similarity=0.556 Sum_probs=178.1
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCC-----CCCccEEEECCeecCCcc--HH
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFY-----DPTKGLITLDGHDLKSLQ--VK 745 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~-----~~~~G~I~i~g~~i~~~~--~~ 745 (1560)
|+++||+++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|++ +|++|+|.++|.++...+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 578999999964 35899999999999999999999999999999999999 999999999999987765 45
Q ss_pred HHhccEEEEecCCcCccccHHHHHhcCCCCC---CHHHHHHHHHHhhhHHHHHhCCCCCCcccCCC--CCCCChHHHHHH
Q 000406 746 WLRTQIGMVGQEPILFATSILENVLMGKENA---TMKEAVAACKAASAHSFISELPLGYDTQVGDR--GTQLSGGQKQRI 820 (1560)
Q Consensus 746 ~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~---~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~--g~~LSgGQrQRi 820 (1560)
.++++++|++|++.+|..|++||+.++.... ..++..+ .+.+.++.+ |+....... +.+||||||||+
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~LSgG~~qrv 150 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDE-----RVEEALRKA--ALWDEVKDRLHALGLSGGQQQRL 150 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHH-----HHHHHHHHc--CCChHHhccCCcccCCHHHHHHH
Confidence 6778899999999999779999998753211 1111111 112223333 443333333 479999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 821 ALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 821 alARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
+|||||+.+|++|||||||++||+.++..+.+.|+++.+.+|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 151 CLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 9999999999999999999999999999999999988545899999999999865 999999999999999987653
No 208
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-40 Score=379.34 Aligned_cols=217 Identities=28% Similarity=0.431 Sum_probs=184.6
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCEecC--CCCH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP-----NQGKVMIEGVDLR--EINV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p-----~~G~I~IdGvdi~--~i~l 1385 (1560)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++. +.+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999963 3599999999999999999999999999999999999987 4999999999997 4556
Q ss_pred HHHhhceEEEcCCCCCCCc-cHHHHHhcCCC--C--CCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChH
Q 000406 1386 KWLRKQTALVGQEPALFAG-TIRDNIALGNP--K--ASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGG 1456 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~g-TIreNL~~g~~--~--~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGG 1456 (1560)
..+|++++|+||++.+|.. |++||+.++.. . ... +++.++++..++.+.+. ........+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVK-------DRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchh-------hhhccChhhCCHH
Confidence 6788999999999999975 99999986421 1 011 23445555555433221 2234455689999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHH
Q 000406 1457 QKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHE 1535 (1560)
Q Consensus 1457 QrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~ 1535 (1560)
||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988777999999999999865 9999999999999999999
Q ss_pred HHHh
Q 000406 1536 TLLA 1539 (1560)
Q Consensus 1536 eLl~ 1539 (1560)
++++
T Consensus 234 ~~~~ 237 (253)
T PRK14267 234 KVFE 237 (253)
T ss_pred HHHh
Confidence 9986
No 209
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=7.4e-40 Score=373.23 Aligned_cols=216 Identities=29% Similarity=0.481 Sum_probs=182.6
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... ++.++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 689999999963 46999999999999999999999999999999999999999999999999998776544 46899
Q ss_pred EEcCCCCC-CCccHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccC
Q 000406 1394 LVGQEPAL-FAGTIRDNIALGNP--KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKG 1470 (1560)
Q Consensus 1394 ~VpQdp~L-F~gTIreNL~~g~~--~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~ 1470 (1560)
|+||++.+ +..|+++|+.++.. ..+.++..+ .+.+++..+ |++........+||||||||++|||||+++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARE-----RIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999987 56799999986421 122222111 123333333 444445556668999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHhh
Q 000406 1471 SRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLAS 1540 (1560)
Q Consensus 1471 p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~~ 1540 (1560)
|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+..||+|++|++|++++.|+++++.++
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999875 37899999999999988999999999999999999999863
No 210
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-40 Score=372.17 Aligned_cols=203 Identities=36% Similarity=0.545 Sum_probs=172.3
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 578999999963 359999999999999999999999999999999999999999999999999976543 467899
Q ss_pred EEcCCCCCCC-ccHHHHHhcCCCC--CC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000406 1394 LVGQEPALFA-GTIRDNIALGNPK--AS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARA 1466 (1560)
Q Consensus 1394 ~VpQdp~LF~-gTIreNL~~g~~~--~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARA 1466 (1560)
|+||++.+|. .|++||+.++... .+ .+++.++++..++.++ ......+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGL-----------LNRYPHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhh-----------hhcChhhCCHHHHHHHHHHHH
Confidence 9999998886 6999999864211 11 1234445555444433 333345799999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhh-cCEEEEEeCCEEEEec
Q 000406 1467 ILKGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYG 1532 (1560)
Q Consensus 1467 LLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~G 1532 (1560)
|+++|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999864 37899999999998865 9999999999998875
No 211
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-40 Score=395.06 Aligned_cols=217 Identities=26% Similarity=0.450 Sum_probs=184.5
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|++ +..+|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|+++.+.++. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999942 24689999999999999999999999999999999999999999999999999877654 3689
Q ss_pred EEEecCCcCccc-cHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhcc
Q 000406 752 GMVGQEPILFAT-SILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIK 828 (1560)
Q Consensus 752 ~~v~Q~~~lf~~-Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~ 828 (1560)
+||+|++.+|+. ||+|||.++... .+..+..+ .+.+.++.+ |++...+..+.+|||||||||+|||||++
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LSgGq~QRvalARAL~~ 151 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEE-----RVAEAARIL--ELEPLLDRKPRELSGGQRQRVAMGRAIVR 151 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHc--CChhHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999975 999999987531 12222111 112233333 55555667778999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 829 DPRILLLDEPTSALDSESESIVQQAIDKISV--GRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 829 ~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
+|+|||||||||+||+.++..+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 152 ~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 152 EPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 9999999999999999999999999988743 8999999999998865 999999999999999999998764
No 212
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-40 Score=383.30 Aligned_cols=214 Identities=25% Similarity=0.463 Sum_probs=184.3
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecC--CCCHHHHhh
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLR--EINVKWLRK 1390 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~--~i~l~~LR~ 1390 (1560)
-|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 4899999999963 245999999999999999999999999999999999999999999999999984 344567889
Q ss_pred ceEEEcCCC--CCCCccHHHHHhcCCC--CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 000406 1391 QTALVGQEP--ALFAGTIRDNIALGNP--KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIA 1462 (1560)
Q Consensus 1391 ~I~~VpQdp--~LF~gTIreNL~~g~~--~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLa 1462 (1560)
.++|+||++ .+|+.|++||+.++.. ..+. +.+.++++..++.++ ......+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~-----------~~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHL-----------KDKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhCCcccCCHHHHHHHH
Confidence 999999998 5789999999987421 2232 234455555555433 33445689999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHh-hcCEEEEEeCCEEEEecCHHHHHh
Q 000406 1463 IARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIR-EANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1463 LARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~-~aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|||||+.+|+||||||||++||+.+.+.+.+.|+++.+ ++|||++||+++.+. .||||++|++|++++.|+++++++
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998754 789999999999997 499999999999999999999886
No 213
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.7e-40 Score=374.26 Aligned_cols=215 Identities=35% Similarity=0.512 Sum_probs=182.3
Q ss_pred EEEEEEEEEcCCCC-CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHH---HHh
Q 000406 1314 IELKMVTFTYPSRP-EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVK---WLR 1389 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~-~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~---~LR 1389 (1560)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+.. .+|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999996421 12699999999999999999999999999999999999999999999999999877654 357
Q ss_pred hceEEEcCCCCCCC-ccHHHHHhcCCC--CCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 000406 1390 KQTALVGQEPALFA-GTIRDNIALGNP--KAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIA 1462 (1560)
Q Consensus 1390 ~~I~~VpQdp~LF~-gTIreNL~~g~~--~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLa 1462 (1560)
+.++|+||++.+|. .|++||+.++.. ..+ .+++.++++..++.+. ......+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDK-----------ADAYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhh-----------hhcChhhCCHHHHHHHH
Confidence 89999999999997 699999986421 112 2234445555444433 33344579999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1463 IARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1463 LARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++++
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999999876 99999999999999999998875
No 214
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=7.1e-40 Score=377.11 Aligned_cols=213 Identities=31% Similarity=0.467 Sum_probs=181.6
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCC---------
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREIN--------- 1384 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~--------- 1384 (1560)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 579999999963 35999999999999999999999999999999999999999999999999987653
Q ss_pred ----HHHHhhceEEEcCCCCCCC-ccHHHHHhcCCC---CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCC
Q 000406 1385 ----VKWLRKQTALVGQEPALFA-GTIRDNIALGNP---KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQ 1452 (1560)
Q Consensus 1385 ----l~~LR~~I~~VpQdp~LF~-gTIreNL~~g~~---~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~ 1452 (1560)
...+|+.++|++|++.+|. .|++||+.++.. .... +++.++++..++.+ .+......
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~ 146 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLAD-----------KADHMPAQ 146 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-----------HhhcChhh
Confidence 2467889999999999885 799999986411 1122 23444444444433 33444568
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEE
Q 000406 1453 LSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVV 1529 (1560)
Q Consensus 1453 LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~Iv 1529 (1560)
||||||||++|||||+++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|+++
T Consensus 147 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 226 (252)
T TIGR03005 147 LSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIV 226 (252)
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 7899999999999865 9999999999999
Q ss_pred EecCHHHHHhh
Q 000406 1530 EYGSHETLLAS 1540 (1560)
Q Consensus 1530 E~Gt~~eLl~~ 1540 (1560)
+.|+++++.+.
T Consensus 227 ~~g~~~~~~~~ 237 (252)
T TIGR03005 227 EQGKPDEIFRQ 237 (252)
T ss_pred EeCCHHHHhcC
Confidence 99999999863
No 215
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-39 Score=382.48 Aligned_cols=216 Identities=31% Similarity=0.456 Sum_probs=182.1
Q ss_pred EEEEEEEEEcCCCC--CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCC----CCHHH
Q 000406 1314 IELKMVTFTYPSRP--EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLRE----INVKW 1387 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~--~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~----i~l~~ 1387 (1560)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996421 1359999999999999999999999999999999999999999999999999863 34567
Q ss_pred HhhceEEEcCCC--CCCCccHHHHHhcCCC--CCCHHHH----HHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000406 1388 LRKQTALVGQEP--ALFAGTIRDNIALGNP--KASWAEI----EEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQ 1459 (1560)
Q Consensus 1388 LR~~I~~VpQdp--~LF~gTIreNL~~g~~--~~sd~eI----~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQ 1459 (1560)
+|+.|+||||+| .+|+.|++|||.++.. ..+.++. .++++.+++.+ .........|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPE----------ELLARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCCh----------hhhhCCcccCCHHHHH
Confidence 888999999998 6888999999987521 2233333 33333333321 1123445689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHH
Q 000406 1460 RIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHET 1536 (1560)
Q Consensus 1460 RLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~e 1536 (1560)
|++|||||+.+|+||||||||++||+.+...+.+.|+++.+ +.|||+|||+++.+.. ||||++|++|+|++.|++++
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 232 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPRE 232 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998753 7899999999999865 99999999999999999999
Q ss_pred HHh
Q 000406 1537 LLA 1539 (1560)
Q Consensus 1537 Ll~ 1539 (1560)
+.+
T Consensus 233 ~~~ 235 (290)
T PRK13634 233 IFA 235 (290)
T ss_pred Hhc
Confidence 875
No 216
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-40 Score=382.96 Aligned_cols=220 Identities=29% Similarity=0.514 Sum_probs=184.7
Q ss_pred cEEEEEEEEEcCCCC--CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCcc--HHHH
Q 000406 672 KIEFKGVTFAYPSRP--ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQ--VKWL 747 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~--~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~--~~~l 747 (1560)
.|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+ ...+
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 388999999997421 136999999999999999999999999999999999999999999999999997643 3467
Q ss_pred hccEEEEecCC--cCccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCC--cccCCCCCCCChHHHHHHH
Q 000406 748 RTQIGMVGQEP--ILFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYD--TQVGDRGTQLSGGQKQRIA 821 (1560)
Q Consensus 748 r~~i~~v~Q~~--~lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~--t~~~~~g~~LSgGQrQRia 821 (1560)
+++|+||||+| .+|+.||+|||.++... .+.++..+.+ .+.++.+ |+. +..+..+.+||||||||++
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--gL~~~~~~~~~~~~LSgGq~qrv~ 154 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRV-----KRAMNIV--GLDYEDYKDKSPFELSGGQKRRVA 154 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHH-----HHHHHHc--CCCchhhccCCcccCCHHHHHHHH
Confidence 78999999998 57788999999876321 2222222211 2233333 443 4567778899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 822 LARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 822 lARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
|||||+.+|+||||||||++||+.+...+.+.|+++. .|+|||+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 155 iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13637 155 IAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFK 234 (287)
T ss_pred HHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999874 38999999999999864 99999999999999999998865
No 217
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-39 Score=377.57 Aligned_cols=219 Identities=32% Similarity=0.515 Sum_probs=186.4
Q ss_pred ccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCEecCC--CC
Q 000406 1312 LGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD-----PNQGKVMIEGVDLRE--IN 1384 (1560)
Q Consensus 1312 ~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~-----p~~G~I~IdGvdi~~--i~ 1384 (1560)
..|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 46999999999963 359999999999999999999999999999999999987 689999999999863 46
Q ss_pred HHHHhhceEEEcCCCCCCCccHHHHHhcCCCC--CC---HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000406 1385 VKWLRKQTALVGQEPALFAGTIRDNIALGNPK--AS---WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQ 1459 (1560)
Q Consensus 1385 l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~--~s---d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQ 1459 (1560)
...+|+.++||||++.+|..|++|||.++... .. ++++.++++.+++.. +++........+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWD-------ECKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcc-------hhhhhhCCCcccCCHHHHH
Confidence 67788999999999999999999999875321 11 234455555554432 2223344455689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeC-----------CE
Q 000406 1460 RIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRD-----------GA 1527 (1560)
Q Consensus 1460 RLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~-----------G~ 1527 (1560)
|++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999988777899999999999865 999999996 67
Q ss_pred EEEecCHHHHHhh
Q 000406 1528 VVEYGSHETLLAS 1540 (1560)
Q Consensus 1528 IvE~Gt~~eLl~~ 1540 (1560)
++|.|+++++++.
T Consensus 242 ~~~~~~~~~~~~~ 254 (269)
T PRK14259 242 LVEFNETKKIFNS 254 (269)
T ss_pred EEEeCCHHHHHhC
Confidence 9999999999863
No 218
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-40 Score=373.10 Aligned_cols=210 Identities=27% Similarity=0.401 Sum_probs=177.6
Q ss_pred cEEEEEEEEEcCCCC-CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHH---H
Q 000406 1313 GIELKMVTFTYPSRP-EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKW---L 1388 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~-~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~---L 1388 (1560)
-++++||+++|+.+. ..++|+++||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++..++... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 389999999997432 146999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-hceEEEcCCCCCCCc-cHHHHHhcCCC--CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000406 1389 R-KQTALVGQEPALFAG-TIRDNIALGNP--KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQR 1460 (1560)
Q Consensus 1389 R-~~I~~VpQdp~LF~g-TIreNL~~g~~--~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQR 1460 (1560)
| +.++|+||++.+|+. |++||+.++.. .... +++.++++..+ ++........+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVG-----------LEHRANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-----------CchhhhCChhhCCHHHHHH
Confidence 3 679999999998875 99999986311 1122 23444444443 3333444556899999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhhcCEEEEEeCCEEEEecC
Q 000406 1461 IAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIREANMIAVVRDGAVVEYGS 1533 (1560)
Q Consensus 1461 LaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt 1533 (1560)
++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+..+|++++|++|+|++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999874 4789999999999999999999999999998775
No 219
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-40 Score=376.89 Aligned_cols=217 Identities=29% Similarity=0.466 Sum_probs=185.9
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCEecCCCCHHH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP-----NQGKVMIEGVDLREINVKW 1387 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p-----~~G~I~IdGvdi~~i~l~~ 1387 (1560)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 3899999999963 3599999999999999999999999999999999999974 6999999999998888888
Q ss_pred HhhceEEEcCCCCCC-CccHHHHHhcCCC--C--CC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1388 LRKQTALVGQEPALF-AGTIRDNIALGNP--K--AS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1388 LR~~I~~VpQdp~LF-~gTIreNL~~g~~--~--~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
+|+.|+|+||++.+| ..|++||+.++.. . .. .+++.++++.+++.+.+. ..++ ....+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~----~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK---DRLD----APAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh---hhhc----CCcccCCHHHH
Confidence 999999999999755 6799999986421 0 11 234556666665543221 1233 33457999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999864 999999999999999999999
Q ss_pred Hh
Q 000406 1538 LA 1539 (1560)
Q Consensus 1538 l~ 1539 (1560)
.+
T Consensus 233 ~~ 234 (250)
T PRK14247 233 FT 234 (250)
T ss_pred Hc
Confidence 86
No 220
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=3.5e-40 Score=376.06 Aligned_cols=221 Identities=30% Similarity=0.518 Sum_probs=185.7
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHH-HhccE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKW-LRTQI 751 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~-lr~~i 751 (1560)
|+++|++++|+. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+..+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 468999999963 45899999999999999999999999999999999999999999999999998776554 35679
Q ss_pred EEEecCCcCccc-cHHHHHhcCCCCCCHHHH-------HHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHH
Q 000406 752 GMVGQEPILFAT-SILENVLMGKENATMKEA-------VAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALA 823 (1560)
Q Consensus 752 ~~v~Q~~~lf~~-Tv~eNi~~g~~~~~~~~~-------~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialA 823 (1560)
+||+|++.+|++ ||+||+.++........+ ........+.+.++.+ |++...+....+||||||||++||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 155 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIA 155 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHH
Confidence 999999999986 999999876422110000 0001112234455555 666667788889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 824 RAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 824 RAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
|||+.+|++|||||||++||+.+++.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 99999999999999999999999999999998874 68999999999999866 99999999999999999888754
No 221
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-40 Score=382.63 Aligned_cols=221 Identities=32% Similarity=0.483 Sum_probs=186.2
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++||+++|+.....++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999743224589999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEecCCc--CccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhc
Q 000406 752 GMVGQEPI--LFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMI 827 (1560)
Q Consensus 752 ~~v~Q~~~--lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~ 827 (1560)
+||+|+|. ++..||+|||.++... .+.++..+. +.+.++.+ |++......+.+||||||||++|||||+
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LSgGq~qrv~lAral~ 156 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKER-----VNEALELV--GMQDFKEREPARLSGGQKQRVAIAGAVA 156 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHH-----HHHHHHHC--CCHhHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999984 4567999999987422 122221111 11223333 4555556667899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhh
Q 000406 828 KDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 828 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
.+|+||||||||++||+.+.+.+.+.|+++. .|+|+|+|||+++.+..||+|++|++|++++.|+++++...
T Consensus 157 ~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 157 MRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred cCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 9999999999999999999999999999874 38999999999999877999999999999999999887654
No 222
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=375.98 Aligned_cols=218 Identities=27% Similarity=0.437 Sum_probs=183.7
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC--C---CccEEEECCEecCCC--CH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD--P---NQGKVMIEGVDLREI--NV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~--p---~~G~I~IdGvdi~~i--~l 1385 (1560)
-++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.++|.++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999963 359999999999999999999999999999999999954 6 499999999998653 34
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCC---CCCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGN---PKAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~---~~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
..+|+.++||||++.+|+.|++||+.++. +... ++++.++++.+++.+.+ .+.......+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEV-------KDRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhH-------HHHHhcCcccCCHHHH
Confidence 56788999999999999999999998642 1111 22344445555443222 2234455668999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777899999999998865 999999999999999999999
Q ss_pred Hhh
Q 000406 1538 LAS 1540 (1560)
Q Consensus 1538 l~~ 1540 (1560)
+++
T Consensus 235 ~~~ 237 (252)
T PRK14239 235 FMN 237 (252)
T ss_pred HhC
Confidence 863
No 223
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=378.08 Aligned_cols=218 Identities=29% Similarity=0.463 Sum_probs=187.1
Q ss_pred ccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCEecCC--CC
Q 000406 1312 LGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD-----PNQGKVMIEGVDLRE--IN 1384 (1560)
Q Consensus 1312 ~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~-----p~~G~I~IdGvdi~~--i~ 1384 (1560)
..|+++||+++|+. +++|+|+||+|++||.+||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 35999999999953 469999999999999999999999999999999999997 589999999999864 34
Q ss_pred HHHHhhceEEEcCCCCCCCccHHHHHhcCCC--C-CC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHH
Q 000406 1385 VKWLRKQTALVGQEPALFAGTIRDNIALGNP--K-AS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQ 1457 (1560)
Q Consensus 1385 l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~-~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQ 1457 (1560)
...+|+.++||||++.+|.+|++|||.++.. . .+ ++++.++++..++.+.+ +..+...+..|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQV-------KDDLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchh-------hhhhcCCcccCCHHH
Confidence 5677899999999999999999999987521 1 11 23344555555554333 233455667899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHH
Q 000406 1458 KQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHET 1536 (1560)
Q Consensus 1458 rQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~e 1536 (1560)
|||+||||||+++|+||||||||++||+.+...+.+.|+++.++.|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 248 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRN 248 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998777899999999999865 99999999999999999999
Q ss_pred HHh
Q 000406 1537 LLA 1539 (1560)
Q Consensus 1537 Ll~ 1539 (1560)
+.+
T Consensus 249 ~~~ 251 (267)
T PRK14237 249 IFT 251 (267)
T ss_pred Hhc
Confidence 986
No 224
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-40 Score=393.88 Aligned_cols=212 Identities=29% Similarity=0.432 Sum_probs=183.1
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++||+++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+.. ++.|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCE
Confidence 3899999999963 3599999999999999999999999999999999999999999999999999877653 5789
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCCC--CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000406 1393 ALVGQEPALFAG-TIRDNIALGNP--KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIAR 1465 (1560)
Q Consensus 1393 ~~VpQdp~LF~g-TIreNL~~g~~--~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLAR 1465 (1560)
+||||++.+|.. |++|||.++.. ..+. +++.++++..++.++.. ....+||||||||++|||
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~-----------~~~~~LSgGq~QRvaLAr 146 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLD-----------RKPKALSGGQRQRVAIGR 146 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhc-----------CChhhCCHHHHHHHHHHH
Confidence 999999999975 99999987532 1222 34555566555544433 333579999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000406 1466 AILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLAS 1540 (1560)
Q Consensus 1466 ALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~ 1540 (1560)
||+++|+|||||||||+||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+|++.|++++++..
T Consensus 147 aL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 147 TLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999999998753 7899999999998865 999999999999999999999873
No 225
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=7.3e-40 Score=391.81 Aligned_cols=213 Identities=32% Similarity=0.467 Sum_probs=184.4
Q ss_pred ccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCc--cEEEECCEecCCCCHHHHh
Q 000406 1312 LGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQ--GKVMIEGVDLREINVKWLR 1389 (1560)
Q Consensus 1312 ~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~--G~I~IdGvdi~~i~l~~LR 1389 (1560)
+.|+++||+++|+. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.+||.++...+. .+
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred eEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 46999999999963 359999999999999999999999999999999999999999 999999999987765 35
Q ss_pred hceEEEcCCCCCCCc-cHHHHHhcCCC--CCCHH----HHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 000406 1390 KQTALVGQEPALFAG-TIRDNIALGNP--KASWA----EIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIA 1462 (1560)
Q Consensus 1390 ~~I~~VpQdp~LF~g-TIreNL~~g~~--~~sd~----eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLa 1462 (1560)
+.|+||+|++.||.. |++|||.++.. ..+.+ ++.++++..++.++..+ ...+||||||||+|
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~-----------~~~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAH-----------LPAQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhC-----------ChhhCCHHHHHHHH
Confidence 789999999999975 99999987531 22322 34455555555444333 34579999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC---CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHH
Q 000406 1463 IARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK---RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLL 1538 (1560)
Q Consensus 1463 LARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~---~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl 1538 (1560)
|||||+++|+|||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|++++.|+++++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999998754 6899999999999865 9999999999999999999999
Q ss_pred hh
Q 000406 1539 AS 1540 (1560)
Q Consensus 1539 ~~ 1540 (1560)
++
T Consensus 228 ~~ 229 (362)
T TIGR03258 228 DA 229 (362)
T ss_pred hC
Confidence 74
No 226
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=377.14 Aligned_cols=218 Identities=26% Similarity=0.423 Sum_probs=184.6
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC--C---CccEEEECCEecCC--CCH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD--P---NQGKVMIEGVDLRE--INV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~--p---~~G~I~IdGvdi~~--i~l 1385 (1560)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.+||.++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 4899999999963 359999999999999999999999999999999999997 3 58999999999864 445
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCCC--C-CCHH----HHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGNP--K-ASWA----EIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~-~sd~----eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
..+|+.++|+||++.+|.+|++||+.++.. . ..++ ++.++++..++.+.+. ........+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVK-------DRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hhhhCCcccCCHHHH
Confidence 678899999999999999999999986421 1 1222 2334444444433321 223445668999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|+|++.|+++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778899999999999865 999999999999999999999
Q ss_pred Hhh
Q 000406 1538 LAS 1540 (1560)
Q Consensus 1538 l~~ 1540 (1560)
+++
T Consensus 242 ~~~ 244 (259)
T PRK14274 242 FSN 244 (259)
T ss_pred hhC
Confidence 864
No 227
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=6.9e-40 Score=372.64 Aligned_cols=216 Identities=24% Similarity=0.423 Sum_probs=182.7
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHH-hhce
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWL-RKQT 1392 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~L-R~~I 1392 (1560)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+...+ |+.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 578999999963 359999999999999999999999999999999999999999999999999988776554 5679
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHcc
Q 000406 1393 ALVGQEPALFAG-TIRDNIALGNP--KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILK 1469 (1560)
Q Consensus 1393 ~~VpQdp~LF~g-TIreNL~~g~~--~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr 1469 (1560)
+|+||++.+|.+ |++||+.++.+ ....++.. ..+.+++..+ |++........+||||||||++|||||+.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKERE-----EKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999987 99999986432 11222211 1223334443 45555556667899999999999999999
Q ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1470 GSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1470 ~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
+|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999998875 47899999999987765 99999999999999999999875
No 228
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=376.96 Aligned_cols=218 Identities=31% Similarity=0.477 Sum_probs=183.9
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCEecCCCC--H
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP-----NQGKVMIEGVDLREIN--V 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p-----~~G~I~IdGvdi~~i~--l 1385 (1560)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++...+ .
T Consensus 12 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 5999999999963 3599999999999999999999999999999999999985 7999999999986532 4
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCCC--CCCHH----HHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGNP--KASWA----EIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQ 1459 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~~sd~----eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQ 1459 (1560)
..+|+.++|+||++.+|+.|++||+.++.. ..+.+ ++.++++.+++.+.+ ..........|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-------SDRLKSPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCChhhCCHHHHH
Confidence 567889999999999999999999986421 12222 244455554443211 12223445679999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHH
Q 000406 1460 RIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLL 1538 (1560)
Q Consensus 1460 RLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl 1538 (1560)
|++|||||+.+|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988777999999999999866 9999999999999999999998
Q ss_pred hh
Q 000406 1539 AS 1540 (1560)
Q Consensus 1539 ~~ 1540 (1560)
++
T Consensus 242 ~~ 243 (258)
T PRK14268 242 HN 243 (258)
T ss_pred cC
Confidence 63
No 229
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.1e-39 Score=372.79 Aligned_cols=217 Identities=29% Similarity=0.488 Sum_probs=182.2
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCC--HHHHhhc
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREIN--VKWLRKQ 1391 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~--l~~LR~~ 1391 (1560)
++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ ...+|+.
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 689999999963 35999999999999999999999999999999999999999999999999998643 4567889
Q ss_pred eEEEcCCCCCCC-ccHHHHHhcCCC---CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHH
Q 000406 1392 TALVGQEPALFA-GTIRDNIALGNP---KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAI 1467 (1560)
Q Consensus 1392 I~~VpQdp~LF~-gTIreNL~~g~~---~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARAL 1467 (1560)
++|+||++.+|. .|+++|+.++.. ..+.++..+ .+.+.+..+ |++.........||||||||++|||||
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al 151 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAKV--GLAERAHHYPSELSGGQQQRVAIARAL 151 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHH
Confidence 999999998886 599999986421 122222211 122333333 444444455568999999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000406 1468 LKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLAS 1540 (1560)
Q Consensus 1468 Lr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~ 1540 (1560)
+++|+||||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|++++++++
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 152 AVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 99999999999999999999999999999864 47899999999999865 999999999999999999998863
No 230
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=378.14 Aligned_cols=218 Identities=30% Similarity=0.481 Sum_probs=183.4
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCEecCC--CCH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD-----PNQGKVMIEGVDLRE--INV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~-----p~~G~I~IdGvdi~~--i~l 1385 (1560)
-|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 21 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 5999999999963 359999999999999999999999999999999999865 789999999999865 344
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCCC---CCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGNP---KAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~~---~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
..+|+.++|+||++.+|++|++||+.++.. ... ++.+.++++..++.+. +.........+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDE-------VKDRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcc-------hHHHHhcCcccCCHHHH
Confidence 567889999999999999999999986421 101 1234444444443211 11223455668999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||++|||||+.+|+||||||||++||+.+...+.+.|++..+++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777899999999998865 999999999999999999999
Q ss_pred Hhh
Q 000406 1538 LAS 1540 (1560)
Q Consensus 1538 l~~ 1540 (1560)
..+
T Consensus 251 ~~~ 253 (268)
T PRK14248 251 FTS 253 (268)
T ss_pred HhC
Confidence 863
No 231
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=4.4e-40 Score=393.26 Aligned_cols=216 Identities=29% Similarity=0.490 Sum_probs=187.1
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.+||+++.+.++. ++.|
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999973 4589999999999999999999999999999999999999999999999999877654 5689
Q ss_pred EEEecCCcCccc-cHHHHHhcCCCCC--CHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhcc
Q 000406 752 GMVGQEPILFAT-SILENVLMGKENA--TMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIK 828 (1560)
Q Consensus 752 ~~v~Q~~~lf~~-Tv~eNi~~g~~~~--~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~ 828 (1560)
+||+|++.+|+. ||+|||.|+.... +..+.. ..+++.++.+ |++....+.+.+||||||||++|||||++
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~-----~~~~~~l~~l--~L~~~~~~~~~~LSgGq~QRvaLARaL~~ 151 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVA-----ERVAELLDLV--GLPGSERKYPGQLSGGQQQRVALARALAT 151 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCCchhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999975 9999999874321 122211 1223445554 66667778889999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 829 DPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 829 ~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
+|++||||||||+||+.++..+.+.|+++. .+.|+|+|||+++++.. ||+|++|++|++++.|+++++..+
T Consensus 152 ~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 152 SPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999998874 38999999999999865 999999999999999999999864
No 232
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-40 Score=368.87 Aligned_cols=209 Identities=22% Similarity=0.408 Sum_probs=178.9
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 579999999963 3599999999999999999999999999999999999999999999999998763 356788999
Q ss_pred EEcCCCCCCCc-cHHHHHhcCCC--CCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000406 1394 LVGQEPALFAG-TIRDNIALGNP--KAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARA 1466 (1560)
Q Consensus 1394 ~VpQdp~LF~g-TIreNL~~g~~--~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARA 1466 (1560)
|+||++.+|.. |+++|+.++.. ..+ ++++.++++..++.++... + ...||||||||++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~----~~~LS~G~~qr~~la~a 145 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADR-------L----VKTYSGGMRRRLEIARS 145 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-------C----hhhCCHHHHHHHHHHHH
Confidence 99999998875 99999976310 111 2345566666666544332 2 34799999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1467 ILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1467 LLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
++.+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|+|++.|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999999999999998653 6899999999999876 999999999999999998774
No 233
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.5e-39 Score=372.24 Aligned_cols=227 Identities=30% Similarity=0.466 Sum_probs=185.3
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCC--------H
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREIN--------V 1385 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~--------l 1385 (1560)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ .
T Consensus 4 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 4 IEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred EEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 899999999963 35999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHHhhceEEEcCCCCCCC-ccHHHHHhcCC---CCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000406 1386 KWLRKQTALVGQEPALFA-GTIRDNIALGN---PKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRI 1461 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~-gTIreNL~~g~---~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRL 1461 (1560)
..+|+.++||||++.+|. .|++||+.++. .....++..+. +.+.+..+ |++........+||||||||+
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~Gq~qrv 153 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATAR-----ARELLAKV--GLAGKETSYPRRLSGGQQQRV 153 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHc--CCcchhhCChhhCChHHHHHH
Confidence 567889999999999886 69999997631 11122222111 22333333 344334455678999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC-CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1462 AIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK-RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1462 aLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~-~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
+|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 233 (250)
T PRK11264 154 AIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFA 233 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999998753 7899999999999976 99999999999999999999986
Q ss_pred hccChHHHHHH
Q 000406 1540 SHLNGVYASLV 1550 (1560)
Q Consensus 1540 ~~~~g~y~~l~ 1550 (1560)
.......+.++
T Consensus 234 ~~~~~~~~~~~ 244 (250)
T PRK11264 234 DPQQPRTRQFL 244 (250)
T ss_pred CCCCHHHHHHH
Confidence 32233334444
No 234
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-40 Score=377.66 Aligned_cols=217 Identities=30% Similarity=0.482 Sum_probs=183.9
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCEecCCCC--HH
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD-----PNQGKVMIEGVDLREIN--VK 1386 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~-----p~~G~I~IdGvdi~~i~--l~ 1386 (1560)
-+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++...+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 579999999963 469999999999999999999999999999999999986 47999999999987653 34
Q ss_pred HHhhceEEEcCCCCCCCccHHHHHhcCCC--CC------CHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1387 WLRKQTALVGQEPALFAGTIRDNIALGNP--KA------SWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1387 ~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~~------sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
.+|+.++||||++.+|++|++||+.++.. .. .++++.++++..++.+.+ .+.+...+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEEL-------GDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhcChhhCCHHHH
Confidence 67889999999999999999999986411 11 123344555555543321 2234455668999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999875 999999999999999999999
Q ss_pred Hhh
Q 000406 1538 LAS 1540 (1560)
Q Consensus 1538 l~~ 1540 (1560)
++.
T Consensus 236 ~~~ 238 (251)
T PRK14244 236 FKN 238 (251)
T ss_pred hcC
Confidence 873
No 235
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-40 Score=379.68 Aligned_cols=215 Identities=28% Similarity=0.544 Sum_probs=185.5
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++|++++|+.. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.+
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 58999999999632 34699999999999999999999999999999999999999999999999999888878889999
Q ss_pred EEEcCCC--CCCCccHHHHHhcCCC--CCCHHH----HHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000406 1393 ALVGQEP--ALFAGTIRDNIALGNP--KASWAE----IEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIA 1464 (1560)
Q Consensus 1393 ~~VpQdp--~LF~gTIreNL~~g~~--~~sd~e----I~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLA 1464 (1560)
+|+||+| .++..|++|||.++.. ..+.++ +.++++..++.++. .....+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la 154 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYL-----------DKEPQNLSGGQKQRVAIA 154 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCCcccCCHHHHHHHHHH
Confidence 9999998 4567899999987421 123332 34445555554443 334468999999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000406 1465 RAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1465 RALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 231 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILN 231 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhc
Confidence 999999999999999999999999999999998753 489999999999988899999999999999999998875
No 236
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=9.1e-40 Score=368.10 Aligned_cols=207 Identities=24% Similarity=0.421 Sum_probs=175.6
Q ss_pred EEEEEEEEEcCCCCC-ccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1314 IELKMVTFTYPSRPE-VTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~-~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
|+++||+++|+.... .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999974311 159999999999999999999999999999999999999999999999999875 446778899
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCCC--CCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000406 1393 ALVGQEPALFAG-TIRDNIALGNP--KAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIAR 1465 (1560)
Q Consensus 1393 ~~VpQdp~LF~g-TIreNL~~g~~--~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLAR 1465 (1560)
+|+||++.+|.+ |++||+.+... ..+ .+++.++++..++.+. ......+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEEL-----------LDRRVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------HhhhhhhcCHHHHHHHHHHH
Confidence 999999999985 99999975321 112 2334455555554433 33445679999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEec
Q 000406 1466 AILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYG 1532 (1560)
Q Consensus 1466 ALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~G 1532 (1560)
||+.+|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999874 47899999999999865 9999999999998865
No 237
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=380.64 Aligned_cols=216 Identities=28% Similarity=0.477 Sum_probs=187.2
Q ss_pred cEEEEEEEEEcCCCC---CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCC-HHHH
Q 000406 1313 GIELKMVTFTYPSRP---EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREIN-VKWL 1388 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~---~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~-l~~L 1388 (1560)
-++++||+++|++.. .+++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999997421 246999999999999999999999999999999999999999999999999997654 4567
Q ss_pred hhceEEEcCCCC--CCCccHHHHHhcCCC--CCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000406 1389 RKQTALVGQEPA--LFAGTIRDNIALGNP--KAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQR 1460 (1560)
Q Consensus 1389 R~~I~~VpQdp~--LF~gTIreNL~~g~~--~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQR 1460 (1560)
|+.++|+||+|. +|..|+.+|+.++.. ..+ ++++.++++.+++.++....| .+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 899999999984 777799999987521 122 244666677767766554433 4799999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000406 1461 IAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLL 1538 (1560)
Q Consensus 1461 LaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl 1538 (1560)
++|||||+++|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+..||+|++|++|+|++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999874 378999999999999889999999999999999999997
Q ss_pred h
Q 000406 1539 A 1539 (1560)
Q Consensus 1539 ~ 1539 (1560)
.
T Consensus 233 ~ 233 (280)
T PRK13633 233 K 233 (280)
T ss_pred c
Confidence 6
No 238
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.8e-40 Score=367.21 Aligned_cols=203 Identities=25% Similarity=0.425 Sum_probs=176.1
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++||+++|+. .++|+|+||+|++| ++||+|+||||||||+++|+|+++|++|+|.++|.++...+ ..+|+.++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 579999999963 35999999999999 99999999999999999999999999999999999998776 67889999
Q ss_pred EEcCCCCCCCc-cHHHHHhcCC--CCCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000406 1394 LVGQEPALFAG-TIRDNIALGN--PKAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARA 1466 (1560)
Q Consensus 1394 ~VpQdp~LF~g-TIreNL~~g~--~~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARA 1466 (1560)
|+||++.+|.+ |++||+.+.. ...+ .+++.++++..++.++. ++. ..+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~----~~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRA-------KKK----IGSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHH-------hCc----hhhCCHHHHHHHHHHHH
Confidence 99999999986 9999997631 0111 23455666666665443 233 34799999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEec
Q 000406 1467 ILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYG 1532 (1560)
Q Consensus 1467 LLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~G 1532 (1560)
|+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999999988777999999999999875 9999999999999865
No 239
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=374.99 Aligned_cols=218 Identities=32% Similarity=0.495 Sum_probs=184.1
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcc---cCC--CccEEEECCEecCCC--CH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRF---YDP--NQGKVMIEGVDLREI--NV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl---~~p--~~G~I~IdGvdi~~i--~l 1385 (1560)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+ ++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 4899999999963 3599999999999999999999999999999999997 454 589999999998764 34
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCCC--CC-C----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGNP--KA-S----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~~-s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
..+|+.++||||++.+|..|++||+.++.. .. . +++++++++..++.+++ ++.....+..||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEV-------KDKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcch-------hhhhhCCcccCCHHHH
Confidence 677889999999999999999999986421 11 1 12344455444443222 2334455678999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~ 232 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKI 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred Hhh
Q 000406 1538 LAS 1540 (1560)
Q Consensus 1538 l~~ 1540 (1560)
.++
T Consensus 233 ~~~ 235 (250)
T PRK14245 233 FTN 235 (250)
T ss_pred hcC
Confidence 863
No 240
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.3e-39 Score=363.01 Aligned_cols=200 Identities=36% Similarity=0.555 Sum_probs=181.4
Q ss_pred EEEEEEEEEcCCCCC--ccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhc
Q 000406 1314 IELKMVTFTYPSRPE--VTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQ 1391 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~--~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~ 1391 (1560)
|+++||+++|+...+ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 579999999964311 3699999999999999999999999999999999999999999999999 6
Q ss_pred eEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCC
Q 000406 1392 TALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGS 1471 (1560)
Q Consensus 1392 I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p 1471 (1560)
|+|+||+|.+|++|++||+.++.. ..++++.++++.+++.+++..+|.|+++.+.+.+..||+|||||++|||||+.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999998633 3456778888888999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCcCCCHHHHHHHHH-HHHHhc-CCceEEEEecChHHHhhcCEEEEEeCCE
Q 000406 1472 RVLLLDEASSALDLESEKHVQD-ALRKVS-KRATTIVVAHRLSTIREANMIAVVRDGA 1527 (1560)
Q Consensus 1472 ~ILILDEaTSaLD~~Te~~I~~-~L~~~~-~~~TvI~IAHRlsti~~aDrIlVLd~G~ 1527 (1560)
+|+||||||++||+++.+.+.+ .+++.. +++|||+|||+++.+..||+|++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999988877 456543 4689999999999998899999999985
No 241
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.7e-40 Score=366.80 Aligned_cols=199 Identities=28% Similarity=0.533 Sum_probs=172.4
Q ss_pred EEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceEE
Q 000406 1315 ELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTAL 1394 (1560)
Q Consensus 1315 ~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~ 1394 (1560)
+++||+++|+.. .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. ...|++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 468999999641 359999999999999999999999999999999999999999999999998864 456788999
Q ss_pred EcCCC--CCCCccHHHHHhcCCCCC--CHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccC
Q 000406 1395 VGQEP--ALFAGTIRDNIALGNPKA--SWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKG 1470 (1560)
Q Consensus 1395 VpQdp--~LF~gTIreNL~~g~~~~--sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~ 1470 (1560)
+||++ .+|..|++||+.++.+.. ..+++.++++..++.++....| ..||||||||++|||||+.+
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhC
Confidence 99998 467899999998753221 2346777777777765543333 37999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHh-cCCceEEEEecChHHHhh-cCEEEEEeCCEEE
Q 000406 1471 SRVLLLDEASSALDLESEKHVQDALRKV-SKRATTIVVAHRLSTIRE-ANMIAVVRDGAVV 1529 (1560)
Q Consensus 1471 p~ILILDEaTSaLD~~Te~~I~~~L~~~-~~~~TvI~IAHRlsti~~-aDrIlVLd~G~Iv 1529 (1560)
|++|||||||++||+.+.+.+.+.|++. .+++|+|++||+++.+.. ||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999987 457899999999999975 9999999999985
No 242
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.4e-39 Score=377.74 Aligned_cols=224 Identities=24% Similarity=0.356 Sum_probs=186.3
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHH---HHh
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVK---WLR 1389 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~---~LR 1389 (1560)
-|+++||+++|+. .++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++.. .+|
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 4899999999963 4599999999999999999999999999999999999999999999999999877643 457
Q ss_pred hceEEEcCCCCCCCc-cHHHHHhcCCC---CCCHH----HHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000406 1390 KQTALVGQEPALFAG-TIRDNIALGNP---KASWA----EIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRI 1461 (1560)
Q Consensus 1390 ~~I~~VpQdp~LF~g-TIreNL~~g~~---~~sd~----eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRL 1461 (1560)
+.++|+||++.+|.+ |++||+.++.. ..+.+ .+.++++..++.+ ........||||||||+
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LSgGq~qrv 152 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRG-----------AAKLMPSELSGGMARRA 152 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCCHHHHHHH
Confidence 889999999999986 99999976311 11221 2333344433332 22333457999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHH
Q 000406 1462 AIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLL 1538 (1560)
Q Consensus 1462 aLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl 1538 (1560)
+|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 153 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 153 ALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998743 6899999999999876 9999999999999999999998
Q ss_pred hhccChHHHHHHH
Q 000406 1539 ASHLNGVYASLVR 1551 (1560)
Q Consensus 1539 ~~~~~g~y~~l~~ 1551 (1560)
++ ....+..++.
T Consensus 233 ~~-~~~~~~~~~~ 244 (269)
T PRK11831 233 AN-PDPRVRQFLD 244 (269)
T ss_pred cC-CcHHHHHHHH
Confidence 63 3445555554
No 243
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=379.44 Aligned_cols=213 Identities=29% Similarity=0.467 Sum_probs=185.7
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
++++||+++|+.. ..+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||+++...+...+++.++
T Consensus 4 l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 4 IETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred EEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 7899999999632 35999999999999999999999999999999999999999999999999998878788899999
Q ss_pred EEcCCC--CCCCccHHHHHhcCCC--CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000406 1394 LVGQEP--ALFAGTIRDNIALGNP--KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIAR 1465 (1560)
Q Consensus 1394 ~VpQdp--~LF~gTIreNL~~g~~--~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLAR 1465 (1560)
||||++ .+|+.|+++|+.++.. ..+. +.+.++++.+++.++.... ...||||||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRV-----------PHHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCC-----------cccCCHHHHHHHHHHH
Confidence 999998 4788999999986421 2222 2355666666665544333 3479999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHh-hcCEEEEEeCCEEEEecCHHHHHh
Q 000406 1466 AILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIR-EANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1466 ALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~-~aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+. .||||++|++|++++.|+++++++
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 227 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFL 227 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhc
Confidence 99999999999999999999999999999998753 789999999999985 599999999999999999999975
No 244
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=383.24 Aligned_cols=216 Identities=25% Similarity=0.415 Sum_probs=181.2
Q ss_pred EEEEEEEEEcCCCC--CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCC---------
Q 000406 1314 IELKMVTFTYPSRP--EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLRE--------- 1382 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~--~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~--------- 1382 (1560)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++..
T Consensus 3 i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (305)
T PRK13651 3 IKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEK 82 (305)
T ss_pred EEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccc
Confidence 88999999997431 1359999999999999999999999999999999999999999999999987632
Q ss_pred ---------------CCHHHHhhceEEEcCCC--CCCCccHHHHHhcCCC--CCCHHH----HHHHHHHHhHHHHHHhCC
Q 000406 1383 ---------------INVKWLRKQTALVGQEP--ALFAGTIRDNIALGNP--KASWAE----IEEAAEEAYIHKFISSLP 1439 (1560)
Q Consensus 1383 ---------------i~l~~LR~~I~~VpQdp--~LF~gTIreNL~~g~~--~~sd~e----I~~al~~a~l~~~I~~Lp 1439 (1560)
.+...+|+.|+||||+| .+|..||+|||.++.. ..+.++ +.++++.+++.+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------ 156 (305)
T PRK13651 83 VLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDE------ 156 (305)
T ss_pred cccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCCh------
Confidence 13467889999999986 6888999999987631 233333 344444444320
Q ss_pred CCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-c
Q 000406 1440 QGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-A 1517 (1560)
Q Consensus 1440 ~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-a 1517 (1560)
........+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. .++|||+|||+++.+.. |
T Consensus 157 ----~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~a 232 (305)
T PRK13651 157 ----SYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWT 232 (305)
T ss_pred ----hhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhC
Confidence 22334556899999999999999999999999999999999999999999999864 47899999999998755 9
Q ss_pred CEEEEEeCCEEEEecCHHHHHh
Q 000406 1518 NMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1518 DrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|||++|++|+|++.|+++++.+
T Consensus 233 drv~vl~~G~i~~~g~~~~~~~ 254 (305)
T PRK13651 233 KRTIFFKDGKIIKDGDTYDILS 254 (305)
T ss_pred CEEEEEECCEEEEECCHHHHhc
Confidence 9999999999999999999876
No 245
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-39 Score=372.88 Aligned_cols=226 Identities=28% Similarity=0.464 Sum_probs=188.7
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCC-----ccEEEECCEecCCC--CH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPN-----QGKVMIEGVDLREI--NV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~-----~G~I~IdGvdi~~i--~l 1385 (1560)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 4899999999963 35999999999999999999999999999999999999997 69999999998653 45
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCCC--CC-CH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGNP--KA-SW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~~-sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
..+|+.++||||++.+|+.|++|||.++.. .. .. +.+.++++..++.+.+ .......+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEV-------KDNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhh-------hhHhhCCcccCCHHHH
Confidence 678899999999999999999999987521 11 11 2233444444443322 2234556778999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987667999999999999877 799999999999999999999
Q ss_pred HhhccChHHHH
Q 000406 1538 LASHLNGVYAS 1548 (1560)
Q Consensus 1538 l~~~~~g~y~~ 1548 (1560)
........+++
T Consensus 234 ~~~~~~~~~~~ 244 (251)
T PRK14249 234 FSRPRDKRTED 244 (251)
T ss_pred HhCCCChHHHH
Confidence 76433333443
No 246
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.5e-40 Score=382.71 Aligned_cols=219 Identities=28% Similarity=0.504 Sum_probs=183.8
Q ss_pred EEEEEEEEEcCCCCC--ccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCC----ccHHH
Q 000406 673 IEFKGVTFAYPSRPE--TVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKS----LQVKW 746 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~--~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~----~~~~~ 746 (1560)
|+++||+|+|+.... .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|++||.++.. .....
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 789999999974221 259999999999999999999999999999999999999999999999999863 23456
Q ss_pred HhccEEEEecCC--cCccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCC-cccCCCCCCCChHHHHHHH
Q 000406 747 LRTQIGMVGQEP--ILFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYD-TQVGDRGTQLSGGQKQRIA 821 (1560)
Q Consensus 747 lr~~i~~v~Q~~--~lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~-t~~~~~g~~LSgGQrQRia 821 (1560)
+|++|+||+|+| .+|..||.||+.++... .+.++... .+.+.++.+ |+. ...+..+.+||||||||++
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~~LSgGqkqrva 154 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEK-----IAAEKLEMV--GLADEFWEKSPFELSGGQMRRVA 154 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhhccCCcccCCHHHHHHHH
Confidence 788999999998 78889999999987432 12222211 112233333 443 3446777899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 822 LARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 822 lARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
|||||+.+|+||||||||++||+.+...+.+.|+++. +|+|||+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 155 iA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 233 (288)
T PRK13643 155 IAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQ 233 (288)
T ss_pred HHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHc
Confidence 9999999999999999999999999999999998874 48999999999998865 99999999999999999999865
No 247
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-39 Score=384.55 Aligned_cols=230 Identities=27% Similarity=0.385 Sum_probs=187.2
Q ss_pred cEEEEEEEEEcCCCC-------CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCH
Q 000406 1313 GIELKMVTFTYPSRP-------EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~-------~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l 1385 (1560)
-|+++||++.|+... ...+|+||||+|++||++||||+||||||||+++|+|+++|++|+|.++|.|+..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999996321 2469999999999999999999999999999999999999999999999999998875
Q ss_pred H---HHhhceEEEcCCCC--CCC-ccHHHHHhcC---CCCCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCC
Q 000406 1386 K---WLRKQTALVGQEPA--LFA-GTIRDNIALG---NPKASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQ 1452 (1560)
Q Consensus 1386 ~---~LR~~I~~VpQdp~--LF~-gTIreNL~~g---~~~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~ 1452 (1560)
. .+|++|+||||+|. |++ .||.+|+... +..... +++.++++.+++.+ ..++. ....
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------~~~~~----~p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP------EHYDR----YPHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh------HHhcC----CCcc
Confidence 3 56789999999994 555 4899888531 111122 33455555555531 12233 3457
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEE
Q 000406 1453 LSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVV 1529 (1560)
Q Consensus 1453 LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~Iv 1529 (1560)
||||||||++|||||+.+|+|||+||||++||..+.+.|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998754 7899999999999975 9999999999999
Q ss_pred EecCHHHHHhhccChHHHHHHHH
Q 000406 1530 EYGSHETLLASHLNGVYASLVRA 1552 (1560)
Q Consensus 1530 E~Gt~~eLl~~~~~g~y~~l~~~ 1552 (1560)
|.|++++++++....+-..|+..
T Consensus 235 e~g~~~~~~~~p~hpyt~~ll~~ 257 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQALLSA 257 (327)
T ss_pred EECCHHHHhcCCCCHHHHHHHHh
Confidence 99999999974333333345443
No 248
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=378.00 Aligned_cols=213 Identities=29% Similarity=0.477 Sum_probs=186.3
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+...+|+.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 4999999999963 3699999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCCC----------CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000406 1393 ALVGQEPALFAG-TIRDNIALGNP----------KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRI 1461 (1560)
Q Consensus 1393 ~~VpQdp~LF~g-TIreNL~~g~~----------~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRL 1461 (1560)
+|+||++.++.+ |+++|+.++.. ...++++.++++.+++.+++... ..+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRL-----------VDSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----------cccCCHHHHHHH
Confidence 999999877654 99999986521 01234566677777665544333 237999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHH
Q 000406 1462 AIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLL 1538 (1560)
Q Consensus 1462 aLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl 1538 (1560)
+|||||+.+|+||||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 99999999999999999999999999999999999874 27899999999999865 9999999999999999999987
Q ss_pred h
Q 000406 1539 A 1539 (1560)
Q Consensus 1539 ~ 1539 (1560)
+
T Consensus 237 ~ 237 (265)
T PRK10575 237 R 237 (265)
T ss_pred C
Confidence 5
No 249
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=373.44 Aligned_cols=229 Identities=26% Similarity=0.431 Sum_probs=189.1
Q ss_pred ccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC--C---CccEEEECCEecCCC--C
Q 000406 1312 LGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD--P---NQGKVMIEGVDLREI--N 1384 (1560)
Q Consensus 1312 ~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~--p---~~G~I~IdGvdi~~i--~ 1384 (1560)
+.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.+||.++... .
T Consensus 3 ~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 3 NKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred cEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 45999999999963 359999999999999999999999999999999999986 4 689999999998753 4
Q ss_pred HHHHhhceEEEcCCCCCCC-ccHHHHHhcCCC--C-CC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChH
Q 000406 1385 VKWLRKQTALVGQEPALFA-GTIRDNIALGNP--K-AS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGG 1456 (1560)
Q Consensus 1385 l~~LR~~I~~VpQdp~LF~-gTIreNL~~g~~--~-~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGG 1456 (1560)
...+|+.++|+||++.+|. .|++||+.++.. . .+ ++++.++++..++.+.+. ......+.+||||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVK-------DRLKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcCcCCHH
Confidence 4577899999999999998 599999986421 1 11 123445555555543322 1233456689999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHH
Q 000406 1457 QKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHE 1535 (1560)
Q Consensus 1457 QrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~ 1535 (1560)
||||++|||||+++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|+|++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998777899999999999865 9999999999999999999
Q ss_pred HHHhhccChHHHHHH
Q 000406 1536 TLLASHLNGVYASLV 1550 (1560)
Q Consensus 1536 eLl~~~~~g~y~~l~ 1550 (1560)
++..+......+.++
T Consensus 233 ~~~~~~~~~~~~~~~ 247 (252)
T PRK14256 233 KIFTTPEKKQTEDYI 247 (252)
T ss_pred HHHhCCCcHHHHHHH
Confidence 998743333344443
No 250
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-39 Score=379.13 Aligned_cols=216 Identities=31% Similarity=0.511 Sum_probs=188.0
Q ss_pred ccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCc---cEEEECCEecCCCCHHHH
Q 000406 1312 LGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQ---GKVMIEGVDLREINVKWL 1388 (1560)
Q Consensus 1312 ~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~---G~I~IdGvdi~~i~l~~L 1388 (1560)
..|+++|++++|+.. ..++|+||||+|++||++||+|+||||||||+++|+|+++|++ |+|.+||.++...+...+
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 359999999999642 2359999999999999999999999999999999999999987 899999999988777788
Q ss_pred hhceEEEcCCC--CCCCccHHHHHhcCCC--CCCHH----HHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000406 1389 RKQTALVGQEP--ALFAGTIRDNIALGNP--KASWA----EIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQR 1460 (1560)
Q Consensus 1389 R~~I~~VpQdp--~LF~gTIreNL~~g~~--~~sd~----eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQR 1460 (1560)
|++++||||+| .+++.|++|||.++.. ..+.+ ++.++++.+++.++.... ..+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----------~~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSE-----------PANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCC-----------cccCCHHHHHH
Confidence 89999999998 4678899999987522 22332 355566666665544433 35899999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHH
Q 000406 1461 IAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLL 1538 (1560)
Q Consensus 1461 LaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl 1538 (1560)
++|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|||+|||+++.+..||+|++|++|++++.|++++++
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999999998753 68999999999999889999999999999999999887
Q ss_pred h
Q 000406 1539 A 1539 (1560)
Q Consensus 1539 ~ 1539 (1560)
.
T Consensus 232 ~ 232 (282)
T PRK13640 232 S 232 (282)
T ss_pred c
Confidence 5
No 251
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=374.91 Aligned_cols=217 Identities=31% Similarity=0.467 Sum_probs=183.0
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCEecCC--CCH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD-----PNQGKVMIEGVDLRE--INV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~-----p~~G~I~IdGvdi~~--i~l 1385 (1560)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4899999999963 359999999999999999999999999999999999997 479999999999864 345
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCCC--CC-C----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGNP--KA-S----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~~-s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
..+|+.++|++|++.+|+.|++||+.++.. .. . ++++.++++..++++.+ .........+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET-------KDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch-------HHHhccChhhCCHHHH
Confidence 567889999999999999999999986421 11 1 12334444444442110 1122345568999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777899999999999876 999999999999999999999
Q ss_pred Hh
Q 000406 1538 LA 1539 (1560)
Q Consensus 1538 l~ 1539 (1560)
..
T Consensus 234 ~~ 235 (251)
T PRK14251 234 FI 235 (251)
T ss_pred Hh
Confidence 76
No 252
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=381.02 Aligned_cols=221 Identities=29% Similarity=0.549 Sum_probs=186.1
Q ss_pred cEEEEEEEEEcCCCC--CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCc----cHH
Q 000406 672 KIEFKGVTFAYPSRP--ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSL----QVK 745 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~--~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~----~~~ 745 (1560)
.|+++||+++|+... ..++|+||||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++... +..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 388999999996422 13699999999999999999999999999999999999999999999999998653 235
Q ss_pred HHhccEEEEecCC--cCccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCc-ccCCCCCCCChHHHHHH
Q 000406 746 WLRTQIGMVGQEP--ILFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDT-QVGDRGTQLSGGQKQRI 820 (1560)
Q Consensus 746 ~lr~~i~~v~Q~~--~lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t-~~~~~g~~LSgGQrQRi 820 (1560)
.+|++||||||+| .+|+.||.|||.++... .+.++..+. +.+.++.+ |+++ ..+..+.+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv 154 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKI 154 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHH
Confidence 6788999999997 58888999999986322 122222221 23345544 6763 45677889999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHh
Q 000406 821 ALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLL 897 (1560)
Q Consensus 821 alARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~ 897 (1560)
+|||||+.+|+||||||||++||+.+...+.+.|+++. .|+|||+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 155 ~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 155 AIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred HHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999999999999874 48999999999999864 9999999999999999998876
Q ss_pred hh
Q 000406 898 ER 899 (1560)
Q Consensus 898 ~~ 899 (1560)
+.
T Consensus 235 ~~ 236 (286)
T PRK13646 235 KD 236 (286)
T ss_pred hC
Confidence 53
No 253
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.3e-39 Score=372.81 Aligned_cols=221 Identities=25% Similarity=0.452 Sum_probs=183.6
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHH-hhce
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWL-RKQT 1392 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~L-R~~I 1392 (1560)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+.... |+.+
T Consensus 3 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 789999999963 359999999999999999999999999999999999999999999999999988876654 5579
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCCCCCCH--HHH---HHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000406 1393 ALVGQEPALFAG-TIRDNIALGNPKASW--AEI---EEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARA 1466 (1560)
Q Consensus 1393 ~~VpQdp~LF~g-TIreNL~~g~~~~sd--~eI---~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARA 1466 (1560)
+|+||++.+|.+ |++||+.++...... ..+ ........+.+++..+ |++.........||||||||++||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lara 157 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGML 157 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 999999999986 999999875321000 000 0000111223333333 44444455566899999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1467 ILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1467 LLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 158 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 158 LMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 99999999999999999999999999999998777899999999999976 99999999999999999999874
No 254
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=392.86 Aligned_cols=211 Identities=34% Similarity=0.512 Sum_probs=178.0
Q ss_pred cceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHH----hhceEEEcCCCCCCC-c
Q 000406 1330 TVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWL----RKQTALVGQEPALFA-G 1404 (1560)
Q Consensus 1330 ~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~L----R~~I~~VpQdp~LF~-g 1404 (1560)
.+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |++++||||++.+|. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 38999999999999999999999999999999999999999999999999998877654 358999999999997 5
Q ss_pred cHHHHHhcCCC--CCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeC
Q 000406 1405 TIRDNIALGNP--KAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDE 1478 (1560)
Q Consensus 1405 TIreNL~~g~~--~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDE 1478 (1560)
|++|||.++.. ..+ .+++.++++.+++.++.... ..+||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~-----------~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSY-----------PDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcC-----------cccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999987521 112 23455566666665544433 34799999999999999999999999999
Q ss_pred CCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhhccChHHHHHHH
Q 000406 1479 ASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLASHLNGVYASLVR 1551 (1560)
Q Consensus 1479 aTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~~l~~ 1551 (1560)
||++||+.+.+.+++.|+++. .++|+|+|||+++.+.. ||+|++|++|+|++.|++++++.+..+.+...++.
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~v~~~~~ 266 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFR 266 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHHHHHHHh
Confidence 999999999999999999874 47899999999999865 99999999999999999999987432334444443
No 255
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-39 Score=374.53 Aligned_cols=221 Identities=26% Similarity=0.459 Sum_probs=189.2
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++..++...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999963 46999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEcCCCCCCCc-cHHHHHhcCCC----------CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 000406 1394 LVGQEPALFAG-TIRDNIALGNP----------KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIA 1462 (1560)
Q Consensus 1394 ~VpQdp~LF~g-TIreNL~~g~~----------~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLa 1462 (1560)
|+||++.+|.+ |+.||+.++.. ....+++.++++..++.++. ......||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLA-----------DRRLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHH-----------cCCcccCCHHHHHHHH
Confidence 99999998876 99999987521 01123455555555554433 2334579999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000406 1463 IARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLAS 1540 (1560)
Q Consensus 1463 LARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~ 1540 (1560)
||||++++|++|||||||++||+++.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~- 227 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT- 227 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC-
Confidence 9999999999999999999999999999999999864 47899999999999865 99999999999999999999875
Q ss_pred ccChHHHHHHH
Q 000406 1541 HLNGVYASLVR 1551 (1560)
Q Consensus 1541 ~~~g~y~~l~~ 1551 (1560)
...+.+.+.
T Consensus 228 --~~~~~~~~~ 236 (255)
T PRK11231 228 --PGLLRTVFD 236 (255)
T ss_pred --HHHHHHHhC
Confidence 234555553
No 256
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=6.6e-40 Score=369.23 Aligned_cols=204 Identities=35% Similarity=0.505 Sum_probs=171.5
Q ss_pred EEEEEEEEEcCCCC-CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHH----H
Q 000406 1314 IELKMVTFTYPSRP-EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKW----L 1388 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~-~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~----L 1388 (1560)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999996421 146999999999999999999999999999999999999999999999999998876432 4
Q ss_pred hhceEEEcCCCCCCCc-cHHHHHhcCCC--CCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000406 1389 RKQTALVGQEPALFAG-TIRDNIALGNP--KAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRI 1461 (1560)
Q Consensus 1389 R~~I~~VpQdp~LF~g-TIreNL~~g~~--~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRL 1461 (1560)
|++++|+||++.+|.+ |++||+.++.. ... ++++.++++.. |++........+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERV-----------GLGDRLNHYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHc-----------CCchhhhcChhhcCHHHHHHH
Confidence 6789999999999986 99999987521 111 12333344443 344334445568999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhhcCEEEEEeCCEE
Q 000406 1462 AIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIREANMIAVVRDGAV 1528 (1560)
Q Consensus 1462 aLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~aDrIlVLd~G~I 1528 (1560)
+|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998754 7899999999999888999999999974
No 257
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=9.9e-40 Score=365.08 Aligned_cols=203 Identities=26% Similarity=0.408 Sum_probs=177.6
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++... ..+|+.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 578999999953 4699999999999999999999999999999999999999999999999988764 56788999
Q ss_pred EEcCCCCCC-CccHHHHHhcCC--CCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccC
Q 000406 1394 LVGQEPALF-AGTIRDNIALGN--PKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKG 1470 (1560)
Q Consensus 1394 ~VpQdp~LF-~gTIreNL~~g~--~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~ 1470 (1560)
||||++.+| ..|++||+.++. ...+++++.++++..++.+.... ....||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKK-----------KVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhh-----------hHhhCCHHHHHHHHHHHHHhcC
Confidence 999999887 579999997642 12345667777777777655433 2347999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEec
Q 000406 1471 SRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYG 1532 (1560)
Q Consensus 1471 p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~G 1532 (1560)
|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999865 47899999999999865 9999999999999865
No 258
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-39 Score=374.24 Aligned_cols=217 Identities=31% Similarity=0.505 Sum_probs=183.3
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC---CCccEEEECCeecCCccHHHHh
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD---PTKGLITLDGHDLKSLQVKWLR 748 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~---~~~G~I~i~g~~i~~~~~~~lr 748 (1560)
.|+++|+++.|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++...+....|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 4789999999973 458999999999999999999999999999999999984 6999999999999887777788
Q ss_pred ccEEEEecCCcCccccHHHHHhcCCCCC----C-H---HHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHH
Q 000406 749 TQIGMVGQEPILFATSILENVLMGKENA----T-M---KEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRI 820 (1560)
Q Consensus 749 ~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~----~-~---~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRi 820 (1560)
+.|+|+||++.+|+.|++||+.++.... . . +++.+.++..++.+++ .....+.+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEV-------KDKLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhh-------hHHhcCCcccCCHHHHHHH
Confidence 8999999999999999999998753110 0 1 1122222222222111 2334667789999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 821 ALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 821 alARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
+|||||+++|+||||||||++||+.+...+.+.|.++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 230 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFE 230 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999988678999999999998865 99999999999999999988764
No 259
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-39 Score=370.47 Aligned_cols=218 Identities=24% Similarity=0.398 Sum_probs=180.5
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHH-Hhhc
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKW-LRKQ 1391 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~-LR~~ 1391 (1560)
-|+++||+++|+. .++|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+... +|+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 3899999999963 35999999999999999999999999999999999999999999999999998887654 6788
Q ss_pred eEEEcCCCCCCCc-cHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccC
Q 000406 1392 TALVGQEPALFAG-TIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKG 1470 (1560)
Q Consensus 1392 I~~VpQdp~LF~g-TIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~ 1470 (1560)
++|+||++.+|.+ |+++|+.++......++..+.++ +.+..++ +++.........||||||||++|||||+++
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIK-----WVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHH-----HHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 9999999999985 99999987532122222222111 1111111 111112234557999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1471 SRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1471 p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|+||||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999999999999864 47899999999998755 99999999999999999999975
No 260
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-40 Score=390.70 Aligned_cols=220 Identities=34% Similarity=0.552 Sum_probs=186.7
Q ss_pred EEEEEEEEEcCCCC-CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHH---HHh
Q 000406 673 IEFKGVTFAYPSRP-ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVK---WLR 748 (1560)
Q Consensus 673 i~~~~vs~~y~~~~-~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~---~lr 748 (1560)
|+++|++++|+... +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++.. .+|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999997211 34699999999999999999999999999999999999999999999999999877654 347
Q ss_pred ccEEEEecCCcCcc-ccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHH
Q 000406 749 TQIGMVGQEPILFA-TSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARA 825 (1560)
Q Consensus 749 ~~i~~v~Q~~~lf~-~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARA 825 (1560)
++|+||+|++.+|+ .|++||+.++... ...++..+ .+.+.++.+ |++......+.+||||||||++||||
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LSgGq~qRv~lAra 154 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKA-----RVTELLELV--GLSDKADRYPAQLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 88999999999987 5999999876321 12222111 223344444 56556677778999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 826 MIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 826 l~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
|+.+|+||||||||++||+.+...+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 155 L~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~ 231 (343)
T PRK11153 155 LASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSH 231 (343)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999999999874 38999999999999876 999999999999999999998754
No 261
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-39 Score=376.42 Aligned_cols=218 Identities=29% Similarity=0.486 Sum_probs=186.7
Q ss_pred ccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCEecCC--CC
Q 000406 1312 LGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP-----NQGKVMIEGVDLRE--IN 1384 (1560)
Q Consensus 1312 ~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p-----~~G~I~IdGvdi~~--i~ 1384 (1560)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .+
T Consensus 24 ~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~ 100 (272)
T PRK14236 24 TALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVD 100 (272)
T ss_pred cEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccC
Confidence 35999999999963 3599999999999999999999999999999999999984 89999999999875 34
Q ss_pred HHHHhhceEEEcCCCCCCCccHHHHHhcCCC--CC-C----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHH
Q 000406 1385 VKWLRKQTALVGQEPALFAGTIRDNIALGNP--KA-S----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQ 1457 (1560)
Q Consensus 1385 l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~~-s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQ 1457 (1560)
...+|+.++|+||++.+|++|++||+.++.. .. . ++++.++++.+++.+.+. +..+..+..|||||
T Consensus 101 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq 173 (272)
T PRK14236 101 VAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFGLSGGQ 173 (272)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCcccCCHHH
Confidence 5678899999999999999999999986421 11 1 123455555555443322 23455667899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHH
Q 000406 1458 KQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHET 1536 (1560)
Q Consensus 1458 rQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~e 1536 (1560)
|||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|+|++.|++++
T Consensus 174 ~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 253 (272)
T PRK14236 174 QQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDT 253 (272)
T ss_pred HHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHH
Confidence 99999999999999999999999999999999999999998778899999999999865 99999999999999999999
Q ss_pred HHh
Q 000406 1537 LLA 1539 (1560)
Q Consensus 1537 Ll~ 1539 (1560)
+.+
T Consensus 254 ~~~ 256 (272)
T PRK14236 254 LFT 256 (272)
T ss_pred Hhc
Confidence 986
No 262
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.3e-39 Score=373.89 Aligned_cols=215 Identities=28% Similarity=0.429 Sum_probs=181.9
Q ss_pred ccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCC--------
Q 000406 1312 LGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREI-------- 1383 (1560)
Q Consensus 1312 ~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i-------- 1383 (1560)
+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 35999999999963 4599999999999999999999999999999999999999999999999998642
Q ss_pred -----CHHHHhhceEEEcCCCCCCCc-cHHHHHhcCC---CCCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCC
Q 000406 1384 -----NVKWLRKQTALVGQEPALFAG-TIRDNIALGN---PKASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESG 1450 (1560)
Q Consensus 1384 -----~l~~LR~~I~~VpQdp~LF~g-TIreNL~~g~---~~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G 1450 (1560)
....+|+.++||||++.+|.. |++||+.++. ..... +++.++++..++.+.. .....
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERA----------QGKYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhh----------hhCCc
Confidence 134678899999999999974 9999997531 01121 2334444444433221 13445
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEE
Q 000406 1451 VQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAV 1528 (1560)
Q Consensus 1451 ~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~I 1528 (1560)
..||||||||++|||||+++|+||||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||||++|++|++
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i 230 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 230 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 6899999999999999999999999999999999999999999999875 47999999999999986 999999999999
Q ss_pred EEecCHHHHHh
Q 000406 1529 VEYGSHETLLA 1539 (1560)
Q Consensus 1529 vE~Gt~~eLl~ 1539 (1560)
++.|+++++++
T Consensus 231 ~~~~~~~~~~~ 241 (257)
T PRK10619 231 EEEGAPEQLFG 241 (257)
T ss_pred EEeCCHHHhhh
Confidence 99999999986
No 263
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-39 Score=373.05 Aligned_cols=217 Identities=32% Similarity=0.504 Sum_probs=184.5
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCEecCC--CCH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP-----NQGKVMIEGVDLRE--INV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p-----~~G~I~IdGvdi~~--i~l 1385 (1560)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .+.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 3 KISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred eEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 5899999999963 3599999999999999999999999999999999999863 69999999999875 355
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCCC--CC-----CHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGNP--KA-----SWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~~-----sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
..+|+.++|+||++.+|+.|+++|+.++.. .. .++++.++++.+++.+.+ ..........||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEV-------KDRLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------HHHHhcCCCCCCHHHH
Confidence 678899999999999999999999987421 11 123344555555443222 1233445568999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||++|||||+.+|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778899999999998866 999999999999999999999
Q ss_pred Hh
Q 000406 1538 LA 1539 (1560)
Q Consensus 1538 l~ 1539 (1560)
..
T Consensus 233 ~~ 234 (250)
T PRK14240 233 FT 234 (250)
T ss_pred Hh
Confidence 86
No 264
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-39 Score=380.47 Aligned_cols=220 Identities=30% Similarity=0.527 Sum_probs=183.9
Q ss_pred EEEEEEEEEcCCCC--CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCC----ccHHH
Q 000406 673 IEFKGVTFAYPSRP--ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKS----LQVKW 746 (1560)
Q Consensus 673 i~~~~vs~~y~~~~--~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~----~~~~~ 746 (1560)
|+++|++++|+... ..++|+||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. .....
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 88999999997422 1459999999999999999999999999999999999999999999999999863 23456
Q ss_pred HhccEEEEecCC--cCccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCC-cccCCCCCCCChHHHHHHH
Q 000406 747 LRTQIGMVGQEP--ILFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYD-TQVGDRGTQLSGGQKQRIA 821 (1560)
Q Consensus 747 lr~~i~~v~Q~~--~lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~-t~~~~~g~~LSgGQrQRia 821 (1560)
.+++|+||+|+| .+|+.||+|||.++... .+.++..+. +.+.++.+ |+. ...+..+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQK-----AREMIELV--GLPEELLARSPFELSGGQMRRVA 155 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHC--CCChhhhhCCcccCCHHHHHHHH
Confidence 778899999998 68888999999886321 122222211 12334443 554 3346677899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 822 LARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 822 lARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
|||||+.+|+||||||||++||+.+...+.+.|+++. .|.|||+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 156 lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 235 (290)
T PRK13634 156 IAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFA 235 (290)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 9999999999999999999999999999999999874 38999999999999865 99999999999999999998865
Q ss_pred h
Q 000406 899 R 899 (1560)
Q Consensus 899 ~ 899 (1560)
.
T Consensus 236 ~ 236 (290)
T PRK13634 236 D 236 (290)
T ss_pred C
Confidence 3
No 265
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-39 Score=377.02 Aligned_cols=228 Identities=28% Similarity=0.455 Sum_probs=189.0
Q ss_pred ccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCEecCC--CC
Q 000406 1312 LGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD-----PNQGKVMIEGVDLRE--IN 1384 (1560)
Q Consensus 1312 ~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~-----p~~G~I~IdGvdi~~--i~ 1384 (1560)
..|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 38 ~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 35999999999963 359999999999999999999999999999999999997 689999999999865 34
Q ss_pred HHHHhhceEEEcCCCCCCCccHHHHHhcCCC-----CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000406 1385 VKWLRKQTALVGQEPALFAGTIRDNIALGNP-----KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQ 1459 (1560)
Q Consensus 1385 l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~-----~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQ 1459 (1560)
...+|+.++||||++.+|..|++||+.++.. ...+++++++++..++.+.+. ..+.....+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVK-------DQLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhH-------HHHhCCcccCCHHHHH
Confidence 5678899999999999999999999986421 111334555666555532221 1234455689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEE-EEeCCEEEEecCHHHH
Q 000406 1460 RIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIA-VVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1460 RLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIl-VLd~G~IvE~Gt~~eL 1537 (1560)
|++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. |||++ +|++|+|++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998777899999999999876 99975 5799999999999999
Q ss_pred HhhccChHHHHH
Q 000406 1538 LASHLNGVYASL 1549 (1560)
Q Consensus 1538 l~~~~~g~y~~l 1549 (1560)
+++.....+.++
T Consensus 268 ~~~~~~~~~~~~ 279 (285)
T PRK14254 268 FENPESQRVEDY 279 (285)
T ss_pred HhCcCCHHHHHH
Confidence 864333334444
No 266
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=5e-40 Score=391.87 Aligned_cols=205 Identities=32% Similarity=0.510 Sum_probs=177.0
Q ss_pred ccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHH----hccEEEEecCCcCccc
Q 000406 688 TVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWL----RTQIGMVGQEPILFAT 763 (1560)
Q Consensus 688 ~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~l----r~~i~~v~Q~~~lf~~ 763 (1560)
+.+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+ |++|+||+|++++|+.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 458999999999999999999999999999999999999999999999999998888776 7789999999999985
Q ss_pred -cHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCC
Q 000406 764 -SILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTS 840 (1560)
Q Consensus 764 -Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts 840 (1560)
||+|||.++... ...++..+ .+.+.++.+ |++...++.+.+|||||||||+|||||+.+|+|||||||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~v--gL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~s 158 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKE-----KALELLKLV--GLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAFS 158 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhc--CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcc
Confidence 999999986432 11222111 112223332 56666777888999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 841 ALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 841 ~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
+||+.+++.+++.+.++. .++|+|+|||+++.+.. ||+|++|++|++++.|++++++.+
T Consensus 159 aLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 159 ALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999999998873 38999999999998755 999999999999999999998864
No 267
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.4e-39 Score=354.56 Aligned_cols=178 Identities=35% Similarity=0.636 Sum_probs=166.2
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++|++++|+.. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++... ...+|+.++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5789999999743 23599999999999999999999999999999999999999999999999998776 667889999
Q ss_pred EEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCE
Q 000406 1394 LVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRV 1473 (1560)
Q Consensus 1394 ~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~I 1473 (1560)
|+||++.+|+.|++||+ ..+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 347999999999999999999999
Q ss_pred EEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCEEEEec
Q 000406 1474 LLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYG 1532 (1560)
Q Consensus 1474 LILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~G 1532 (1560)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999887789999999999999889999999999999865
No 268
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.5e-39 Score=367.14 Aligned_cols=205 Identities=30% Similarity=0.465 Sum_probs=172.1
Q ss_pred EEEEEEEEEcCCCC-CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHH---Hh
Q 000406 1314 IELKMVTFTYPSRP-EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKW---LR 1389 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~-~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~---LR 1389 (1560)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++..++... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996421 136999999999999999999999999999999999999999999999999998887654 34
Q ss_pred -hceEEEcCCCCCCC-ccHHHHHhcCCC--CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000406 1390 -KQTALVGQEPALFA-GTIRDNIALGNP--KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRI 1461 (1560)
Q Consensus 1390 -~~I~~VpQdp~LF~-gTIreNL~~g~~--~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRL 1461 (1560)
+.++|+||++.+|. .|++||+.++.. .... +++.++++.. |++.........||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKV-----------GLEHRINHRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CChhhhhCChhhCCHHHHHHH
Confidence 68999999999985 599999986311 1111 2233334333 344334444568999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhhcCEEEEEeCCEEE
Q 000406 1462 AIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIREANMIAVVRDGAVV 1529 (1560)
Q Consensus 1462 aLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~aDrIlVLd~G~Iv 1529 (1560)
+|||||+++|+||||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+..+|+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999999999874 368999999999999889999999999986
No 269
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=3e-39 Score=360.92 Aligned_cols=204 Identities=32% Similarity=0.563 Sum_probs=179.3
Q ss_pred cccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhc
Q 000406 670 SGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRT 749 (1560)
Q Consensus 670 ~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~ 749 (1560)
.+.|+++|++++|+.. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+|+
T Consensus 4 ~~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 82 (207)
T cd03369 4 HGEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRS 82 (207)
T ss_pred CCeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHh
Confidence 3579999999999742 236899999999999999999999999999999999999999999999999998777777888
Q ss_pred cEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccC
Q 000406 750 QIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKD 829 (1560)
Q Consensus 750 ~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~ 829 (1560)
.|+||+|+|.+|++|++||+.+... ...+++.++++ +++.+.+||||||||++||||++.+
T Consensus 83 ~i~~v~q~~~~~~~tv~~~l~~~~~-~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~ 143 (207)
T cd03369 83 SLTIIPQDPTLFSGTIRSNLDPFDE-YSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKR 143 (207)
T ss_pred hEEEEecCCcccCccHHHHhcccCC-CCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhC
Confidence 9999999999999999999976532 22222222211 3456789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEecCh
Q 000406 830 PRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNH 893 (1560)
Q Consensus 830 p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~ 893 (1560)
|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 144 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 144 PRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 9999999999999999999999999988778999999999999877999999999999988764
No 270
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-39 Score=373.37 Aligned_cols=218 Identities=27% Similarity=0.430 Sum_probs=184.2
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCEecCC--CCH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD-----PNQGKVMIEGVDLRE--INV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~-----p~~G~I~IdGvdi~~--i~l 1385 (1560)
-++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 5999999999963 359999999999999999999999999999999999997 699999999999853 345
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCCC--CCCHH-----HHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGNP--KASWA-----EIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~~sd~-----eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
..+|+.++|+||++.+|..|++||+.++.. ..+++ .+.++++..++. +++.......+..||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~l~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIW-------DELKDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCc-------chHHHHHhcCcccCCHHHH
Confidence 677889999999999999999999986421 12211 122333332221 1233344556678999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999875 999999999999999999999
Q ss_pred Hhh
Q 000406 1538 LAS 1540 (1560)
Q Consensus 1538 l~~ 1540 (1560)
..+
T Consensus 254 ~~~ 256 (271)
T PRK14238 254 FSN 256 (271)
T ss_pred HcC
Confidence 863
No 271
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=9.8e-40 Score=390.67 Aligned_cols=218 Identities=28% Similarity=0.443 Sum_probs=186.9
Q ss_pred cccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCc--cEEEECCeecCCccHHHH
Q 000406 670 SGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTK--GLITLDGHDLKSLQVKWL 747 (1560)
Q Consensus 670 ~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~--G~I~i~g~~i~~~~~~~l 747 (1560)
.+.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++ |+|.++|.++...+..
T Consensus 3 ~~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~-- 77 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPH-- 77 (362)
T ss_pred ceEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHH--
Confidence 367999999999963 458999999999999999999999999999999999999999 9999999999776553
Q ss_pred hccEEEEecCCcCccc-cHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHH
Q 000406 748 RTQIGMVGQEPILFAT-SILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALAR 824 (1560)
Q Consensus 748 r~~i~~v~Q~~~lf~~-Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialAR 824 (1560)
+++|+||+|++.+|+. ||+|||.|+... ...++..+ .+.+.++.+ |++...++.+.+|||||||||+|||
T Consensus 78 ~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~-----~v~~~l~~~--gL~~~~~~~~~~LSgGq~QRvaLAR 150 (362)
T TIGR03258 78 KRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAE-----RVADALKLV--GLGDAAAHLPAQLSGGMQQRIAIAR 150 (362)
T ss_pred HCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhc--CCCchhhCChhhCCHHHHHHHHHHH
Confidence 5689999999999976 999999986431 12222221 122334443 5666677788899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC---CcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 825 AMIKDPRILLLDEPTSALDSESESIVQQAIDKISV---GRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 825 Al~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~---~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
||+.+|++||||||||+||+.++..+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 151 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~ 229 (362)
T TIGR03258 151 AIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDA 229 (362)
T ss_pred HHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999999988743 7899999999999865 999999999999999999999764
No 272
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-39 Score=373.00 Aligned_cols=218 Identities=30% Similarity=0.464 Sum_probs=186.7
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCEecCC--CCH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD-----PNQGKVMIEGVDLRE--INV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~-----p~~G~I~IdGvdi~~--i~l 1385 (1560)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|++. |++|+|.+||.++.. .+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 4899999999963 359999999999999999999999999999999999986 479999999999853 455
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCCCC--C---CHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGNPK--A---SWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQR 1460 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~--~---sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQR 1460 (1560)
..+|++++|+||++.+|+.|++||+.++... . .++++.++++.+++.+.+.. .....+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHHHHHH
Confidence 6788999999999999989999999875321 1 12345556666666544432 2344566899999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEe---------CCEEEE
Q 000406 1461 IAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVR---------DGAVVE 1530 (1560)
Q Consensus 1461 LaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd---------~G~IvE 1530 (1560)
++|||||+++|+||||||||++||+.+...+.+.|++..+++|||+|||+++.+.. ||||++|+ +|+|++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999988777899999999999865 99999998 899999
Q ss_pred ecCHHHHHhh
Q 000406 1531 YGSHETLLAS 1540 (1560)
Q Consensus 1531 ~Gt~~eLl~~ 1540 (1560)
.|+++++.++
T Consensus 240 ~~~~~~~~~~ 249 (264)
T PRK14243 240 FDRTEKIFNS 249 (264)
T ss_pred eCCHHHHHhC
Confidence 9999999863
No 273
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-39 Score=372.41 Aligned_cols=217 Identities=31% Similarity=0.506 Sum_probs=184.9
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCEecCCC--CH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP-----NQGKVMIEGVDLREI--NV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p-----~~G~I~IdGvdi~~i--~l 1385 (1560)
-|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 3899999999963 3599999999999999999999999999999999999984 899999999998753 34
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCCC---CCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGNP---KAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~~---~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
..+|+.++|+||++.+|..|++||+.++.. ... ++++.++++..++.+.+. ........+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVK-------SELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhH-------HHHhCChhhcCHHHH
Confidence 567889999999999999999999986421 111 223455555555543221 223455668999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999999999988778999999999998765 999999999999999999999
Q ss_pred Hh
Q 000406 1538 LA 1539 (1560)
Q Consensus 1538 l~ 1539 (1560)
.+
T Consensus 233 ~~ 234 (250)
T PRK14262 233 VE 234 (250)
T ss_pred Hh
Confidence 86
No 274
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.8e-39 Score=382.46 Aligned_cols=212 Identities=25% Similarity=0.411 Sum_probs=182.4
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++||+++|++ ..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.|+|.|+...+ ...|++|
T Consensus 7 ~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 7 PIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred eEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 5999999999963 46999999999999999999999999999999999999999999999999997755 4578999
Q ss_pred EEEcCCCCCCC-ccHHHHHhcCCC--CCCHHHH----HHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000406 1393 ALVGQEPALFA-GTIRDNIALGNP--KASWAEI----EEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIAR 1465 (1560)
Q Consensus 1393 ~~VpQdp~LF~-gTIreNL~~g~~--~~sd~eI----~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLAR 1465 (1560)
+||||++.+|. .|++|||.+... ..+..+. .++++..+ ++...+++++ +||||||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~~~----~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAK-------LENKADAKVG----ELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-------CchHhcCchh----hCCHHHHHHHHHHH
Confidence 99999999886 699999985321 1232322 23333322 3344556554 69999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1466 AILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1466 ALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
||+.+|++|||||||++||+.+.+.+++.|+++. +++|+|++||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999875 47899999999999976 99999999999999999999976
No 275
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=9.7e-40 Score=368.91 Aligned_cols=216 Identities=29% Similarity=0.475 Sum_probs=180.3
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHH-HhccE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKW-LRTQI 751 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~-lr~~i 751 (1560)
|+++||+++|+. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 578999999963 35899999999999999999999999999999999999999999999999998776554 36679
Q ss_pred EEEecCCcCccc-cHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCC
Q 000406 752 GMVGQEPILFAT-SILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDP 830 (1560)
Q Consensus 752 ~~v~Q~~~lf~~-Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p 830 (1560)
+|++|++.+|+. |++||+.++.......+..+ .+.+.++.++ +++...+..+.+||||||||++|||||+.+|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~-----~~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKA-----RLERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHH-----HHHHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 99999988643221111111 1112222221 2334456677899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHh
Q 000406 831 RILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLL 897 (1560)
Q Consensus 831 ~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~ 897 (1560)
++|||||||++||+.++..+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9999999999999999999999998874 58999999999999866 9999999999999999887764
No 276
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1.2e-39 Score=365.76 Aligned_cols=203 Identities=36% Similarity=0.551 Sum_probs=172.8
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++||+++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 578999999964 3599999999999999999999999999999999999999999999999999766543 46899
Q ss_pred EEcCCCCCCC-ccHHHHHhcCCC--CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000406 1394 LVGQEPALFA-GTIRDNIALGNP--KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARA 1466 (1560)
Q Consensus 1394 ~VpQdp~LF~-gTIreNL~~g~~--~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARA 1466 (1560)
|+||++.+|. .|++||+.++.. .... +++.++++..++.++. ......||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr~~lara 144 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLL-----------DRKPKQLSGGQRQRVALGRA 144 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHH-----------hCChhhCCHHHHHHHHHHHH
Confidence 9999999885 699999986421 1122 2344445555554433 33345799999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhh-cCEEEEEeCCEEEEec
Q 000406 1467 ILKGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYG 1532 (1560)
Q Consensus 1467 LLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~G 1532 (1560)
|+++|+||||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 145 IVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999875 37899999999999876 9999999999999876
No 277
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.3e-39 Score=389.19 Aligned_cols=216 Identities=30% Similarity=0.495 Sum_probs=184.3
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||+++...+. .+++|
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 4889999999973 458999999999999999999999999999999999999999999999999976554 35689
Q ss_pred EEEecCCcCccc-cHHHHHhcCCCC------CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHH
Q 000406 752 GMVGQEPILFAT-SILENVLMGKEN------ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALAR 824 (1560)
Q Consensus 752 ~~v~Q~~~lf~~-Tv~eNi~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialAR 824 (1560)
+||+|++.+|+. ||+|||.++... .+.++..+ .+.+.++.+ |+.......+.+||||||||++|||
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LSgGq~QRvalAr 149 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKA-----KVTQLLEMV--QLAHLADRYPAQLSGGQKQRVALAR 149 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHH
Confidence 999999999985 999999987431 11222111 122334443 5555566778899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 825 AMIKDPRILLLDEPTSALDSESESIVQQAIDKISV--GRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 825 Al~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
||+.+|++|||||||++||+.++..+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|++++++.+
T Consensus 150 AL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~ 227 (353)
T PRK10851 150 ALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWRE 227 (353)
T ss_pred HHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999999998743 7899999999999866 999999999999999999998764
No 278
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-39 Score=372.84 Aligned_cols=221 Identities=34% Similarity=0.550 Sum_probs=182.8
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCcc---HHHHhc
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQ---VKWLRT 749 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~---~~~lr~ 749 (1560)
|+++|++++|++ ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+ ...+++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 478999999964 145899999999999999999999999999999999999999999999999988765 456778
Q ss_pred cEEEEecCCcCcc-ccHHHHHhcCCCCCC--HHHH---HHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHH
Q 000406 750 QIGMVGQEPILFA-TSILENVLMGKENAT--MKEA---VAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALA 823 (1560)
Q Consensus 750 ~i~~v~Q~~~lf~-~Tv~eNi~~g~~~~~--~~~~---~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialA 823 (1560)
.++|+||++.+|. .|++||+.++..... .... ........+.+.++.+ |+....+..+.+||||||||++||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la 156 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERV--GLLDKAYQRADQLSGGQQQRVAIA 156 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHc--CChhhhCCCcccCCHHHHHHHHHH
Confidence 8999999998887 599999987532100 0000 0000111223344444 555556777889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHh
Q 000406 824 RAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLL 897 (1560)
Q Consensus 824 RAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~ 897 (1560)
|||+.+|+||||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 157 RALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 99999999999999999999999999999999874 38999999999999985 9999999999999999988763
No 279
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-39 Score=373.10 Aligned_cols=218 Identities=28% Similarity=0.449 Sum_probs=185.6
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCEecCCCC-HH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP-----NQGKVMIEGVDLREIN-VK 1386 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p-----~~G~I~IdGvdi~~i~-l~ 1386 (1560)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++...+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 5899999999963 4699999999999999999999999999999999999986 6999999999998764 45
Q ss_pred HHhhceEEEcCCCCCCCccHHHHHhcCCC---CCCHHHHHH----HHHHHhHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000406 1387 WLRKQTALVGQEPALFAGTIRDNIALGNP---KASWAEIEE----AAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQ 1459 (1560)
Q Consensus 1387 ~LR~~I~~VpQdp~LF~gTIreNL~~g~~---~~sd~eI~~----al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQ 1459 (1560)
.+|++++|+||++.+|+.|+++|+.++.. ..+++++.+ +++..++ ...+++.+.....+|||||||
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~l~~~~~~LSgGq~q 170 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGL-------WDAVKDRLSDSPFRLSGGQQQ 170 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCC-------CchhhhHhhCCcccCCHHHHH
Confidence 67889999999999999999999986521 124444332 2222222 222223445667789999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHH
Q 000406 1460 RIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLL 1538 (1560)
Q Consensus 1460 RLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl 1538 (1560)
|++|||||+.+|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||||++|++|+|++.|+++++.
T Consensus 171 rl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 171 LLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988767899999999999876 9999999999999999999998
Q ss_pred hh
Q 000406 1539 AS 1540 (1560)
Q Consensus 1539 ~~ 1540 (1560)
+.
T Consensus 251 ~~ 252 (276)
T PRK14271 251 SS 252 (276)
T ss_pred hC
Confidence 73
No 280
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-39 Score=376.00 Aligned_cols=213 Identities=30% Similarity=0.517 Sum_probs=182.8
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCC-HHHHhhce
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREIN-VKWLRKQT 1392 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~-l~~LR~~I 1392 (1560)
++++||+++|+. ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+ ...+++.+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 789999999963 235999999999999999999999999999999999999999999999999998775 46788899
Q ss_pred EEEcCCCC--CCCccHHHHHhcCCCC--CCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000406 1393 ALVGQEPA--LFAGTIRDNIALGNPK--ASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIA 1464 (1560)
Q Consensus 1393 ~~VpQdp~--LF~gTIreNL~~g~~~--~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLA 1464 (1560)
+|+||+|. ++..|++|||.++... .+. +++.++++..++.++ .......||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKY-----------RHRSPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHH-----------hcCCcccCCHHHHHHHHHH
Confidence 99999985 6778999999875321 222 234444444444433 3334468999999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000406 1465 RAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1465 RALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|||+.+|+||||||||++||+.+...+.+.|+++. +++|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999998864 4789999999999998899999999999999999999875
No 281
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-39 Score=373.79 Aligned_cols=218 Identities=29% Similarity=0.471 Sum_probs=185.8
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCEecCC--CCH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP-----NQGKVMIEGVDLRE--INV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p-----~~G~I~IdGvdi~~--i~l 1385 (1560)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .+.
T Consensus 7 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 7 AIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred eEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 5899999999963 3599999999999999999999999999999999999985 48999999999864 445
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCCC------CCC-HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGNP------KAS-WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~~------~~s-d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
..+|+.++|+||++.+|+.|++||+.++.. ... ++.+.++++.+++.+++.. .....+..||||||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~G~~ 156 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKD-------KLNKSALGLSGGQQ 156 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHHH
Confidence 678889999999999999999999986421 111 2334566666666443322 22345568999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEe-----CCEEEEec
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVR-----DGAVVEYG 1532 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd-----~G~IvE~G 1532 (1560)
||+||||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||++++|+ +|++++.|
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 236 (259)
T PRK14260 157 QRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFG 236 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeC
Confidence 9999999999999999999999999999999999999988777899999999999876 99999998 59999999
Q ss_pred CHHHHHhh
Q 000406 1533 SHETLLAS 1540 (1560)
Q Consensus 1533 t~~eLl~~ 1540 (1560)
+++++.+.
T Consensus 237 ~~~~~~~~ 244 (259)
T PRK14260 237 VTTQIFSN 244 (259)
T ss_pred CHHHHhcC
Confidence 99999863
No 282
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-39 Score=371.17 Aligned_cols=217 Identities=30% Similarity=0.460 Sum_probs=184.6
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCEecCCC--CH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP-----NQGKVMIEGVDLREI--NV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p-----~~G~I~IdGvdi~~i--~l 1385 (1560)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 4899999999963 3599999999999999999999999999999999999875 799999999999653 34
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCCC--CC-CH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGNP--KA-SW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~~-sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
..+|+.++|+||++.+|+.|++||+.++.. .. +. +++.++++.+++.+.+. .........||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVK-------DDLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHHH
Confidence 567889999999999999999999986421 11 11 23445555555432221 223345568999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777899999999999876 999999999999999999999
Q ss_pred Hh
Q 000406 1538 LA 1539 (1560)
Q Consensus 1538 l~ 1539 (1560)
..
T Consensus 234 ~~ 235 (251)
T PRK14270 234 FL 235 (251)
T ss_pred hc
Confidence 86
No 283
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.3e-39 Score=371.74 Aligned_cols=217 Identities=32% Similarity=0.512 Sum_probs=182.6
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCC-----ccEEEECCeecCCc--cH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPT-----KGLITLDGHDLKSL--QV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~-----~G~I~i~g~~i~~~--~~ 744 (1560)
.|+++||+++|+. ..+|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++... +.
T Consensus 1 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~ 77 (247)
T TIGR00972 1 AIEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDV 77 (247)
T ss_pred CEEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccch
Confidence 3789999999973 35899999999999999999999999999999999999998 99999999998753 34
Q ss_pred HHHhccEEEEecCCcCccccHHHHHhcCCCC---CCHHHHHHHHHHhhhHHHHHhCCCCCC----cccCCCCCCCChHHH
Q 000406 745 KWLRTQIGMVGQEPILFATSILENVLMGKEN---ATMKEAVAACKAASAHSFISELPLGYD----TQVGDRGTQLSGGQK 817 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~gl~----t~~~~~g~~LSgGQr 817 (1560)
..+++.|+|+||++.+|+.|++||+.++... ...++..+ .+.+.++.+ |+. ...+..+.+||||||
T Consensus 78 ~~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LSgG~~ 150 (247)
T TIGR00972 78 VELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDE-----IVEESLKKA--ALWDEVKDRLHDSALGLSGGQQ 150 (247)
T ss_pred HHHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHH-----HHHHHHHHc--CCCcchhhHhhCCcccCCHHHH
Confidence 5667889999999999999999999875321 11111111 112223333 333 445667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 818 QRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 818 QRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (247)
T TIGR00972 151 QRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQI 230 (247)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988667899999999998865 999999999999999999887
Q ss_pred hh
Q 000406 897 LE 898 (1560)
Q Consensus 897 ~~ 898 (1560)
..
T Consensus 231 ~~ 232 (247)
T TIGR00972 231 FT 232 (247)
T ss_pred Hh
Confidence 64
No 284
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.5e-39 Score=369.40 Aligned_cols=212 Identities=26% Similarity=0.406 Sum_probs=179.3
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHH-Hhhce
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKW-LRKQT 1392 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~-LR~~I 1392 (1560)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... .++.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 578999999963 35999999999999999999999999999999999999999999999999998877654 46789
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCCCCC--CHHH-HHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHc
Q 000406 1393 ALVGQEPALFAG-TIRDNIALGNPKA--SWAE-IEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAIL 1468 (1560)
Q Consensus 1393 ~~VpQdp~LF~g-TIreNL~~g~~~~--sd~e-I~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALL 1468 (1560)
+|+||++.+|.. |+++|+.++.... ..++ ..++++..+ +++........+||||||||++|||||+
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 999999999986 9999998653211 1111 222232222 1222334445579999999999999999
Q ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHH
Q 000406 1469 KGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLL 1538 (1560)
Q Consensus 1469 r~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl 1538 (1560)
++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 99999999999999999999999999998754 6899999999999986 9999999999999999999874
No 285
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=5.3e-39 Score=381.33 Aligned_cols=230 Identities=23% Similarity=0.415 Sum_probs=186.3
Q ss_pred cEEEEEEEEEcCCCC-CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCC---ccEEEECCEecCCCCHHHH
Q 000406 1313 GIELKMVTFTYPSRP-EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPN---QGKVMIEGVDLREINVKWL 1388 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~-~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~---~G~I~IdGvdi~~i~l~~L 1388 (1560)
-++++||++.|+.+. ...+|+||||+|++||++||||+||||||||+++|+|+++|. +|+|.+||.|+..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 489999999996421 246999999999999999999999999999999999999996 9999999999999987765
Q ss_pred h----hceEEEcCCC--CCCC-ccHHHHHhcC---CCCCCHHH----HHHHHHHHhHHHHHHhCCCCccccccCCCCCCC
Q 000406 1389 R----KQTALVGQEP--ALFA-GTIRDNIALG---NPKASWAE----IEEAAEEAYIHKFISSLPQGYETQVGESGVQLS 1454 (1560)
Q Consensus 1389 R----~~I~~VpQdp--~LF~-gTIreNL~~g---~~~~sd~e----I~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LS 1454 (1560)
| +.|+||||+| .+++ .|+.+|+... ....+.++ +.++++.++ ++++. ..++..+.+||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vg-------L~~~~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVK-------MPEAR-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-------CCChH-HHhcCCcccCC
Confidence 4 4799999999 4554 4787776421 11123333 223333322 34332 23556778899
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEe
Q 000406 1455 GGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEY 1531 (1560)
Q Consensus 1455 GGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~ 1531 (1560)
||||||++|||||+.+|+|||+||||++||..+...|.+.|+++.+ +.|+|+|||+++.+.. ||||+||.+|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998754 6899999999999975 999999999999999
Q ss_pred cCHHHHHhhccChHHH-HHHH
Q 000406 1532 GSHETLLASHLNGVYA-SLVR 1551 (1560)
Q Consensus 1532 Gt~~eLl~~~~~g~y~-~l~~ 1551 (1560)
|++++++++. ...|. .|+.
T Consensus 244 g~~~~i~~~p-~~pyt~~l~~ 263 (330)
T PRK09473 244 GNARDVFYQP-SHPYSIGLLN 263 (330)
T ss_pred CCHHHHHhCC-CCHHHHHHHH
Confidence 9999999743 33454 4544
No 286
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.8e-39 Score=389.76 Aligned_cols=216 Identities=31% Similarity=0.523 Sum_probs=184.3
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...++. ++.|
T Consensus 14 ~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 14 LVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred eEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5999999999963 4589999999999999999999999999999999999999999999999999876654 4679
Q ss_pred EEEecCCcCccc-cHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhcc
Q 000406 752 GMVGQEPILFAT-SILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIK 828 (1560)
Q Consensus 752 ~~v~Q~~~lf~~-Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~ 828 (1560)
+||+|++.+|+. ||+|||.|+... ....+..+ .+.+.++.+ |+.......+.+|||||||||+|||||++
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~p~~LSgGq~QRVaLARaL~~ 161 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITP-----RVMEALRMV--QLEEFAQRKPHQLSGGQQQRVAIARAVVN 161 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999976 999999987531 12222111 111223332 55555667778999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 829 DPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 829 ~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
+|++||||||||+||+.++..+.+.|+++. .|.|+|+|||+++.+.. ||+|++|++|+|++.|++++++.+
T Consensus 162 ~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 162 KPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred CCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999999874 38999999999999765 999999999999999999998764
No 287
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-39 Score=389.57 Aligned_cols=217 Identities=31% Similarity=0.486 Sum_probs=184.7
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.+||.++..++. .|+.+
T Consensus 19 ~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 19 LLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred eEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 4999999999963 359999999999999999999999999999999999999999999999999987764 47789
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCCC--CCCHH----HHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000406 1393 ALVGQEPALFAG-TIRDNIALGNP--KASWA----EIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIAR 1465 (1560)
Q Consensus 1393 ~~VpQdp~LF~g-TIreNL~~g~~--~~sd~----eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLAR 1465 (1560)
+||+|++.||+. |++|||.++.. ..+.+ ++.++++..++.++.. ....+||||||||+||||
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~-----------~~~~~LSgGq~QRVaLAR 162 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAK-----------RKPHQLSGGQRQRVALAR 162 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHHHHHH
Confidence 999999999975 99999998632 22322 3444555555543333 334579999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhhcc
Q 000406 1466 AILKGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLASHL 1542 (1560)
Q Consensus 1466 ALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~~~ 1542 (1560)
||+++|+|||||||||+||..+...+.+.|+++. .+.|+|+|||+++.+.. ||||++|++|+|++.|++++++.+ .
T Consensus 163 AL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~-p 241 (377)
T PRK11607 163 SLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH-P 241 (377)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC-C
Confidence 9999999999999999999999999998888764 36899999999998765 999999999999999999999974 3
Q ss_pred ChHH
Q 000406 1543 NGVY 1546 (1560)
Q Consensus 1543 ~g~y 1546 (1560)
...|
T Consensus 242 ~~~~ 245 (377)
T PRK11607 242 TTRY 245 (377)
T ss_pred ccHH
Confidence 4444
No 288
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=3.3e-39 Score=373.99 Aligned_cols=225 Identities=32% Similarity=0.435 Sum_probs=184.9
Q ss_pred EEEEEEEEEcCCC------CCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHH
Q 000406 1314 IELKMVTFTYPSR------PEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKW 1387 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~------~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~ 1387 (1560)
|+++||++.|+.. .+.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999632 1346999999999999999999999999999999999999999999999999998876543
Q ss_pred ---HhhceEEEcCCCC--CC-CccHHHHHhcCCC---CCC----HHHHHHHHHHHhHHHHHHhCCCCcc-ccccCCCCCC
Q 000406 1388 ---LRKQTALVGQEPA--LF-AGTIRDNIALGNP---KAS----WAEIEEAAEEAYIHKFISSLPQGYE-TQVGESGVQL 1453 (1560)
Q Consensus 1388 ---LR~~I~~VpQdp~--LF-~gTIreNL~~g~~---~~s----d~eI~~al~~a~l~~~I~~Lp~Gld-t~Vge~G~~L 1453 (1560)
+|+.|+|+||++. ++ ..|++|||.+... ... ++++.++++.. |++ ......+..|
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~~L 151 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMV-----------GLRSEDADKLPRQL 151 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CCChhhhhCChhhC
Confidence 6788999999983 44 4799999964210 111 12333333333 332 2234455689
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEE
Q 000406 1454 SGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVE 1530 (1560)
Q Consensus 1454 SGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE 1530 (1560)
|||||||++|||||+.+|+||||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++
T Consensus 152 SgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 231 (265)
T TIGR02769 152 SGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVE 231 (265)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999998753 7899999999999975 99999999999999
Q ss_pred ecCHHHHHhhccChHHHHHH
Q 000406 1531 YGSHETLLASHLNGVYASLV 1550 (1560)
Q Consensus 1531 ~Gt~~eLl~~~~~g~y~~l~ 1550 (1560)
.|++++++. .++..+..+.
T Consensus 232 ~g~~~~~~~-~~~~~~~~~~ 250 (265)
T TIGR02769 232 ECDVAQLLS-FKHPAGRNLQ 250 (265)
T ss_pred ECCHHHHcC-CCCHHHHHHH
Confidence 999999986 3444555454
No 289
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-39 Score=370.14 Aligned_cols=215 Identities=32% Similarity=0.526 Sum_probs=181.3
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++++
T Consensus 2 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i 76 (239)
T cd03296 2 SIEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNV 76 (239)
T ss_pred EEEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccce
Confidence 3789999999964 459999999999999999999999999999999999999999999999999875543 25679
Q ss_pred EEEecCCcCcc-ccHHHHHhcCCCCC------CHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHH
Q 000406 752 GMVGQEPILFA-TSILENVLMGKENA------TMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALAR 824 (1560)
Q Consensus 752 ~~v~Q~~~lf~-~Tv~eNi~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialAR 824 (1560)
+||+|+|.+|. .|++||+.++.... ...+.. ..+.+.++.+ |++......+.+||||||||++|||
T Consensus 77 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~ 149 (239)
T cd03296 77 GFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIR-----AKVHELLKLV--QLDWLADRYPAQLSGGQRQRVALAR 149 (239)
T ss_pred EEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHH-----HHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHH
Confidence 99999999886 59999998764211 111111 1122334444 5555566777899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 825 AMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 825 Al~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
||+.+|++|||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 150 al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 150 ALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 9999999999999999999999999999999874 37999999999998765 99999999999999999988764
No 290
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-39 Score=375.50 Aligned_cols=219 Identities=30% Similarity=0.490 Sum_probs=181.9
Q ss_pred EEEEEEEEEcCCCC--CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCC----CHHH
Q 000406 1314 IELKMVTFTYPSRP--EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREI----NVKW 1387 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~--~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i----~l~~ 1387 (1560)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997421 13599999999999999999999999999999999999999999999999998764 3567
Q ss_pred HhhceEEEcCCC--CCCCccHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCCcc-ccccCCCCCCChHHHHHHH
Q 000406 1388 LRKQTALVGQEP--ALFAGTIRDNIALGNP--KASWAEIEEAAEEAYIHKFISSLPQGYE-TQVGESGVQLSGGQKQRIA 1462 (1560)
Q Consensus 1388 LR~~I~~VpQdp--~LF~gTIreNL~~g~~--~~sd~eI~~al~~a~l~~~I~~Lp~Gld-t~Vge~G~~LSGGQrQRLa 1462 (1560)
+|+.|+|+||++ .+|+.|++|||.++.. ..+.++..+. +.+++..+ |++ .........||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEAL-----AREKLALV--GISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 888999999998 6888999999986421 1233333221 12222222 332 1234455689999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1463 IARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1463 LARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|+++++++
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQ 234 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999999864 37899999999999865 99999999999999999999875
No 291
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-39 Score=367.61 Aligned_cols=205 Identities=35% Similarity=0.458 Sum_probs=173.2
Q ss_pred EEEEEEEEEcCCCCC-ccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1314 IELKMVTFTYPSRPE-VTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~-~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
|+++|++++|+.... .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.. +++.+
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 578999999964111 469999999999999999999999999999999999999999999999999863 46789
Q ss_pred EEEcCCCCCCC-ccHHHHHhcCCC--CCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000406 1393 ALVGQEPALFA-GTIRDNIALGNP--KAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIAR 1465 (1560)
Q Consensus 1393 ~~VpQdp~LF~-gTIreNL~~g~~--~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLAR 1465 (1560)
+||||++.+|. .|++||+.++.. ... .+++.++++..++.++... ...+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENA-----------YPHQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhC-----------CcccCCHHHHHHHHHHH
Confidence 99999999987 699999986421 111 2345555555555444333 33579999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhh-cCEEEEEe--CCEEEEecCH
Q 000406 1466 AILKGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIRE-ANMIAVVR--DGAVVEYGSH 1534 (1560)
Q Consensus 1466 ALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~-aDrIlVLd--~G~IvE~Gt~ 1534 (1560)
||+++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|+ +|+|++.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999999864 37899999999998765 99999999 7999998764
No 292
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-39 Score=369.95 Aligned_cols=216 Identities=35% Similarity=0.575 Sum_probs=184.8
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999963 3589999999999999999999999999999999999999999999999999877777778899
Q ss_pred EEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCC-cccCCCCCCCChHHHHHHHHHHHhccCC
Q 000406 752 GMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYD-TQVGDRGTQLSGGQKQRIALARAMIKDP 830 (1560)
Q Consensus 752 ~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~-t~~~~~g~~LSgGQrQRialARAl~~~p 830 (1560)
+|++|++.+|+.|++||+.++.......+ ..+.+.++.+ |+. ......+.+||||||||++|||||+++|
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~-------~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p 150 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKN-------VDVEYYLSIV--GLNKEYATRDVKNLSGGEAQRVSIARTLANNP 150 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHH-------HHHHHHHHHc--CCCHHHhhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999999998999999987542111110 1122334443 443 2345667899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 831 RILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 831 ~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
++|||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (241)
T PRK14250 151 EVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN 222 (241)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999874 38999999999999875 999999999999999999988653
No 293
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-39 Score=375.64 Aligned_cols=215 Identities=30% Similarity=0.453 Sum_probs=184.8
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++||+++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 48999999999743 23589999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEcCCCC--CCCccHHHHHhcCCC--CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHH
Q 000406 1393 ALVGQEPA--LFAGTIRDNIALGNP--KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIA 1464 (1560)
Q Consensus 1393 ~~VpQdp~--LF~gTIreNL~~g~~--~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLA 1464 (1560)
+|+||+|. ++..|+++|+.++.. .... +++.++++..++.++. .....+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERA-----------DYEPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------hCCcccCCHHHHHHHHHH
Confidence 99999984 456689999987521 1222 2344445554443322 234457999999999999
Q ss_pred HHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhhcCEEEEEeCCEEEEecCHHHHHh
Q 000406 1465 RAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1465 RALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
||++.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||||++|++|+|++.|+++++.+
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 231 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFD 231 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhc
Confidence 999999999999999999999999999999998753 689999999999998899999999999999999999876
No 294
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-39 Score=381.75 Aligned_cols=230 Identities=26% Similarity=0.358 Sum_probs=184.2
Q ss_pred EEEEEEEEEcCCCCC-ccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC----CCccEEEECCEecCCCCHHHH
Q 000406 1314 IELKMVTFTYPSRPE-VTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD----PNQGKVMIEGVDLREINVKWL 1388 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~-~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~----p~~G~I~IdGvdi~~i~l~~L 1388 (1560)
|+++||++.|+.+.. ..+|+||||+|++||++||||+||||||||+++|+|+++ |++|+|.+||.|+..++.+.+
T Consensus 4 L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~ 83 (326)
T PRK11022 4 LNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKER 83 (326)
T ss_pred EEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHH
Confidence 799999999964322 369999999999999999999999999999999999997 489999999999999987766
Q ss_pred hh----ceEEEcCCCC--CCC-ccHHHHH----hcCCC---CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCC
Q 000406 1389 RK----QTALVGQEPA--LFA-GTIRDNI----ALGNP---KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLS 1454 (1560)
Q Consensus 1389 R~----~I~~VpQdp~--LF~-gTIreNL----~~g~~---~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LS 1454 (1560)
++ .|+||||+|. +++ -|+.+|+ ..... ....+++.++++.+++.+.. ..+.....+||
T Consensus 84 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~--------~~l~~~p~~LS 155 (326)
T PRK11022 84 RNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPA--------SRLDVYPHQLS 155 (326)
T ss_pred HHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhCCchhCC
Confidence 54 6999999995 443 3665554 33111 11123455666666553211 12334566899
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHh-hcCEEEEEeCCEEEEe
Q 000406 1455 GGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIR-EANMIAVVRDGAVVEY 1531 (1560)
Q Consensus 1455 GGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~-~aDrIlVLd~G~IvE~ 1531 (1560)
||||||++|||||+.+|+|||+||||++||+.+...|++.|+++.+ +.|+|+|||+++.+. .||||+||.+|+|+|.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999998753 789999999999985 4999999999999999
Q ss_pred cCHHHHHhhccChHHHHHHH
Q 000406 1532 GSHETLLASHLNGVYASLVR 1551 (1560)
Q Consensus 1532 Gt~~eLl~~~~~g~y~~l~~ 1551 (1560)
|++++++++....+-..++.
T Consensus 236 g~~~~~~~~p~hpyt~~ll~ 255 (326)
T PRK11022 236 GKAHDIFRAPRHPYTQALLR 255 (326)
T ss_pred CCHHHHhhCCCChHHHHHHH
Confidence 99999997433333334443
No 295
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-39 Score=376.88 Aligned_cols=216 Identities=29% Similarity=0.539 Sum_probs=182.5
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|+. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...++++|
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 4899999999963 24599999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEecCC--cCccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhc
Q 000406 752 GMVGQEP--ILFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMI 827 (1560)
Q Consensus 752 ~~v~Q~~--~lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~ 827 (1560)
+||+|+| .++..||+||+.++... ....+..+ .+.+.++.+ |+.........+||||||||++|||||+
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LSgG~~qrv~laraL~ 154 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVER-----RVEEALKAV--RMWDFRDKPPYHLSYGQKKRVAIAGVLA 154 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHC--CCHHHhcCChhhCCHHHHHHHHHHHHHH
Confidence 9999998 57788999999986321 12211111 112223332 4444455666799999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 828 KDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 828 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
.+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 155 MDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred cCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 9999999999999999999999999998874 48999999999999855 999999999999999998654
No 296
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-39 Score=366.03 Aligned_cols=207 Identities=35% Similarity=0.583 Sum_probs=174.1
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEE
Confidence 478999999963 458999999999999999999999999999999999999999999999999876543 456899
Q ss_pred EEecCCcCcc-ccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccC
Q 000406 753 MVGQEPILFA-TSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKD 829 (1560)
Q Consensus 753 ~v~Q~~~lf~-~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~ 829 (1560)
||||++.++. .|++||+.++... ...++..+ .+.+.++.+ |++...+....+||||||||++|||||+.+
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~~ 148 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRA-----RVRELLELV--GLEGLLNRYPHELSGGQQQRVALARALARE 148 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHHHhcC
Confidence 9999998886 5999999875321 11111111 122344444 555556677789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEec
Q 000406 830 PRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIG 891 (1560)
Q Consensus 830 p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G 891 (1560)
|++|||||||++||+.++..+.+.|+++. .|+|||++||+++.+.. ||+|++|++|++++.|
T Consensus 149 p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 149 PSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999873 38999999999999866 9999999999998765
No 297
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.8e-39 Score=363.73 Aligned_cols=201 Identities=36% Similarity=0.596 Sum_probs=171.2
Q ss_pred EEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceEE
Q 000406 1315 ELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTAL 1394 (1560)
Q Consensus 1315 ~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~ 1394 (1560)
+++||+++|+.. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 478999999642 2469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EcCCC--CCCCccHHHHHhcCCC--CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000406 1395 VGQEP--ALFAGTIRDNIALGNP--KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARA 1466 (1560)
Q Consensus 1395 VpQdp--~LF~gTIreNL~~g~~--~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARA 1466 (1560)
+||++ .++..|++||+.++.. ..+. +++.++++..++.++ +......||||||||++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGL-----------RDRSPFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhh-----------hcCCcccCCHHHHHHHHHHHH
Confidence 99998 3678899999986421 1122 233444444444433 333446799999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC-CceEEEEecChHHHhh-cCEEEEEeCCE
Q 000406 1467 ILKGSRVLLLDEASSALDLESEKHVQDALRKVSK-RATTIVVAHRLSTIRE-ANMIAVVRDGA 1527 (1560)
Q Consensus 1467 LLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~-~~TvI~IAHRlsti~~-aDrIlVLd~G~ 1527 (1560)
|+++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 9999999999999999999999999999998753 7899999999999987 99999999985
No 298
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.7e-39 Score=364.75 Aligned_cols=201 Identities=32% Similarity=0.533 Sum_probs=173.1
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHH---HHhh
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVK---WLRK 1390 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~---~LR~ 1390 (1560)
|+++|++++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++..++.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 789999999952 24699999999999999999999999999999999999999999999999999887643 4678
Q ss_pred ceEEEcCCCCCCC-ccHHHHHhcCCC------CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000406 1391 QTALVGQEPALFA-GTIRDNIALGNP------KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAI 1463 (1560)
Q Consensus 1391 ~I~~VpQdp~LF~-gTIreNL~~g~~------~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaL 1463 (1560)
.++|+||++.+|. .|++||+.++.. ...+++++++++..++.+.+...| .+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHH
Confidence 9999999999986 699999986411 112345666666666655443332 4799999999999
Q ss_pred HHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCE
Q 000406 1464 ARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGA 1527 (1560)
Q Consensus 1464 ARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~ 1527 (1560)
||||+++|+||||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999999864 47899999999999986 99999999985
No 299
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-39 Score=371.62 Aligned_cols=217 Identities=30% Similarity=0.468 Sum_probs=183.0
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCEecCC--CCH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP-----NQGKVMIEGVDLRE--INV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p-----~~G~I~IdGvdi~~--i~l 1385 (1560)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999963 3599999999999999999999999999999999999974 69999999999853 445
Q ss_pred HHHhhceEEEcCCCCCCC-ccHHHHHhcCC---CCCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHH
Q 000406 1386 KWLRKQTALVGQEPALFA-GTIRDNIALGN---PKAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQ 1457 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~-gTIreNL~~g~---~~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQ 1457 (1560)
..+|+.++|++|++.+|. .|++||+.++. ...+ ++.+.++++..++.+.+ .........+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEV-------KDRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hhHhhCCcccCCHHH
Confidence 678899999999999997 59999998642 1111 22344555555543222 123344556899999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEe------CCEEEE
Q 000406 1458 KQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVR------DGAVVE 1530 (1560)
Q Consensus 1458 rQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd------~G~IvE 1530 (1560)
|||++|||||+.+|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|+ +|+|++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 99999999999999999999999999999999999999988767899999999999865 99999997 899999
Q ss_pred ecCHHHHHh
Q 000406 1531 YGSHETLLA 1539 (1560)
Q Consensus 1531 ~Gt~~eLl~ 1539 (1560)
.|++++++.
T Consensus 234 ~~~~~~~~~ 242 (258)
T PRK14241 234 IDDTEKIFS 242 (258)
T ss_pred cCCHHHHHh
Confidence 999999986
No 300
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-39 Score=368.22 Aligned_cols=216 Identities=22% Similarity=0.393 Sum_probs=183.6
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHH-Hhhce
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKW-LRKQT 1392 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~-LR~~I 1392 (1560)
++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+... .|+.+
T Consensus 4 l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 4 LTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred EEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 889999999963 36999999999999999999999999999999999999999999999999998877644 57889
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCCC---CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHc
Q 000406 1393 ALVGQEPALFAG-TIRDNIALGNP---KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAIL 1468 (1560)
Q Consensus 1393 ~~VpQdp~LF~g-TIreNL~~g~~---~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALL 1468 (1560)
+|+||++.+|.+ |++||+.++.. ..+.++. ...+.+++..+ |++.........||||||||++|||||+
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~ 153 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQR-----EDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARALA 153 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHH-----HHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHHh
Confidence 999999998874 99999986421 1122211 12233444444 4555555666789999999999999999
Q ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1469 KGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1469 r~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
++|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 154 ANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 9999999999999999999999999998764 47899999999987755 99999999999999999999875
No 301
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2.2e-39 Score=371.09 Aligned_cols=220 Identities=34% Similarity=0.544 Sum_probs=181.7
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccH---HHHhc
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQV---KWLRT 749 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~---~~lr~ 749 (1560)
|+++||+++|+. +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+++
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 789999999962 2459999999999999999999999999999999999999999999999999876653 34677
Q ss_pred cEEEEecCCcCcc-ccHHHHHhcCCCCCC--HHHH---HHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHH
Q 000406 750 QIGMVGQEPILFA-TSILENVLMGKENAT--MKEA---VAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALA 823 (1560)
Q Consensus 750 ~i~~v~Q~~~lf~-~Tv~eNi~~g~~~~~--~~~~---~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialA 823 (1560)
+++||+|++.+|. .|++||+.++..... .... ........+.+.++.+ |+....+..+.+||||||||++||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 157 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERV--GLADKAYQRADQLSGGQQQRVAIA 157 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHH
Confidence 8999999999887 599999987642110 0000 0000111223344444 555566777889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 824 RAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 824 RAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
|||+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 158 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 158 RALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSEL 233 (243)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHh
Confidence 99999999999999999999999999999999873 37999999999999865 999999999999999998876
No 302
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.4e-39 Score=363.61 Aligned_cols=202 Identities=28% Similarity=0.450 Sum_probs=171.9
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCH---HHHhh
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINV---KWLRK 1390 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l---~~LR~ 1390 (1560)
|+++||+++|+.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4789999999642 359999999999999999999999999999999999999999999999999987764 34788
Q ss_pred ceEEEcCCCCCCC-ccHHHHHhcCCC--CCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000406 1391 QTALVGQEPALFA-GTIRDNIALGNP--KAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAI 1463 (1560)
Q Consensus 1391 ~I~~VpQdp~LF~-gTIreNL~~g~~--~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaL 1463 (1560)
.++||||++.+|. .|++||+.++.. ..+ ++++.++++..++.+.... ...+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRA-----------LPAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhC-----------ChhhcCHHHHHHHHH
Confidence 9999999999998 599999986421 112 2344555555555443332 334799999999999
Q ss_pred HHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEE
Q 000406 1464 ARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAV 1528 (1560)
Q Consensus 1464 ARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~I 1528 (1560)
||||+++|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999864 57899999999999986 899999999974
No 303
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-39 Score=369.97 Aligned_cols=217 Identities=26% Similarity=0.437 Sum_probs=185.1
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCEecCCC--CH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP-----NQGKVMIEGVDLREI--NV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p-----~~G~I~IdGvdi~~i--~l 1385 (1560)
.|+++||+++|++ ..+|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 4899999999963 3599999999999999999999999999999999999763 489999999999876 45
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCCC--CC-C----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGNP--KA-S----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~~-s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
...|+.++|+||++.+|+.|++||+.++.. .. . ++.+.++++.+++.+ ++.+.....+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWD-------EVKDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCch-------hhHHHhhcChhhCCHHHH
Confidence 677889999999999999999999987521 11 1 123444444444432 223344566678999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||++|||||+.+|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 9999999999999999999999999999999999999988777899999999999965 999999999999999999998
Q ss_pred Hh
Q 000406 1538 LA 1539 (1560)
Q Consensus 1538 l~ 1539 (1560)
..
T Consensus 236 ~~ 237 (253)
T PRK14261 236 FE 237 (253)
T ss_pred Hh
Confidence 76
No 304
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-39 Score=370.09 Aligned_cols=212 Identities=30% Similarity=0.477 Sum_probs=184.0
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++||++.|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++..++...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 789999999963 35999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEcCCCCC-CCccHHHHHhcCCC-C-C----CHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000406 1394 LVGQEPAL-FAGTIRDNIALGNP-K-A----SWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARA 1466 (1560)
Q Consensus 1394 ~VpQdp~L-F~gTIreNL~~g~~-~-~----sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARA 1466 (1560)
|+||++.+ +..|++||+.++.. . . .++++.++++..++.++. ......||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLA-----------GRDYPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHh-----------cCCcccCCHHHHHHHHHHHH
Confidence 99999987 67899999987531 1 1 123445555555554432 33345799999999999999
Q ss_pred Hc------cCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1467 IL------KGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1467 LL------r~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
|+ .+|+||||||||++||+.+.+.+.+.|++.. .++|||+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999999865 47899999999999875 999999999999999999998
Q ss_pred Hh
Q 000406 1538 LA 1539 (1560)
Q Consensus 1538 l~ 1539 (1560)
.+
T Consensus 229 ~~ 230 (258)
T PRK13548 229 LT 230 (258)
T ss_pred hC
Confidence 75
No 305
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-39 Score=369.31 Aligned_cols=219 Identities=33% Similarity=0.544 Sum_probs=183.6
Q ss_pred EEEEEEEEEcCCCC-CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHH---HHh
Q 000406 673 IEFKGVTFAYPSRP-ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVK---WLR 748 (1560)
Q Consensus 673 i~~~~vs~~y~~~~-~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~---~lr 748 (1560)
|+++|++++|+... ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ..+
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999997421 12699999999999999999999999999999999999999999999999998776543 347
Q ss_pred ccEEEEecCCcCcc-ccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHH
Q 000406 749 TQIGMVGQEPILFA-TSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARA 825 (1560)
Q Consensus 749 ~~i~~v~Q~~~lf~-~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARA 825 (1560)
+.|+|+||++.+|. .|++||+.++... ....+. ...+.+.++.+ |++........+||||||||++||||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~a 154 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEI-----EERVLELLELV--GLEDKADAYPAQLSGGQKQRVGIARA 154 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHC--CChhhhhcChhhCCHHHHHHHHHHHH
Confidence 78999999999997 5999999875321 111111 11223445554 55556667778999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 826 MIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 826 l~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
|+.+|++|||||||++||+.+...+.+.|+++. .|+|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 155 l~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 155 LANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 999999999999999999999999999999874 38999999999999865 99999999999999999887754
No 306
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=5.2e-39 Score=372.55 Aligned_cols=230 Identities=24% Similarity=0.397 Sum_probs=190.1
Q ss_pred cEEEEEEEEEcCCC------CCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHH
Q 000406 1313 GIELKMVTFTYPSR------PEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVK 1386 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~------~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~ 1386 (1560)
-|+++||+++|+.. ...++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 38999999999631 124699999999999999999999999999999999999999999999999999766666
Q ss_pred HHhhceEEEcCCCC--CCC-ccHHHHHhcC---CCCCC----HHHHHHHHHHHhHH-HHHHhCCCCccccccCCCCCCCh
Q 000406 1387 WLRKQTALVGQEPA--LFA-GTIRDNIALG---NPKAS----WAEIEEAAEEAYIH-KFISSLPQGYETQVGESGVQLSG 1455 (1560)
Q Consensus 1387 ~LR~~I~~VpQdp~--LF~-gTIreNL~~g---~~~~s----d~eI~~al~~a~l~-~~I~~Lp~Gldt~Vge~G~~LSG 1455 (1560)
..++.++|+||++. ++. -|+.+|+.+. +.... .+++.++++.+++. +.. +. ...+|||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~----~~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHA-------SY----YPHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHH-------hc----CchhcCH
Confidence 66778999999985 444 3889998642 11111 23455666666652 222 22 2347999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEec
Q 000406 1456 GQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYG 1532 (1560)
Q Consensus 1456 GQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~G 1532 (1560)
|||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999999999999998753 7899999999999987 9999999999999999
Q ss_pred CHHHHHhhccChHHHHHHHHh
Q 000406 1533 SHETLLASHLNGVYASLVRAE 1553 (1560)
Q Consensus 1533 t~~eLl~~~~~g~y~~l~~~q 1553 (1560)
+++++.+......+++++...
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~ 253 (267)
T PRK15112 233 STADVLASPLHELTKRLIAGH 253 (267)
T ss_pred CHHHHhcCCCCHHHHHHHHhc
Confidence 999998744456677787654
No 307
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-39 Score=368.34 Aligned_cols=216 Identities=28% Similarity=0.439 Sum_probs=179.5
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecC------CCCHHH
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLR------EINVKW 1387 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~------~i~l~~ 1387 (1560)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++. ......
T Consensus 3 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 3 IQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 789999999963 35999999999999999999999999999999999999999999999999873 123456
Q ss_pred HhhceEEEcCCCCCCCc-cHHHHHhcCC---CCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000406 1388 LRKQTALVGQEPALFAG-TIRDNIALGN---PKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAI 1463 (1560)
Q Consensus 1388 LR~~I~~VpQdp~LF~g-TIreNL~~g~---~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaL 1463 (1560)
+|++++|+||++.+|.+ |++||+.++. .....++.. ..+.+++..+ |++..+.....+||||||||++|
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~l 152 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERL--RLKPYADRFPLHLSGGQQQRVAI 152 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHH
Confidence 78899999999999975 9999997421 112222211 1122333333 34444444556899999999999
Q ss_pred HHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1464 ARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1464 ARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
||||+++|+||||||||++||+++...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 153 aral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 153 ARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 999999999999999999999999999999999875 47899999999999965 99999999999999999998764
No 308
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.5e-39 Score=366.96 Aligned_cols=215 Identities=26% Similarity=0.446 Sum_probs=179.6
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++||++.|+.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.... ..++++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEE
Confidence 5789999999642 146999999999999999999999999999999999999999999999999986543 55677899
Q ss_pred EEecCCcCcc-ccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccC
Q 000406 753 MVGQEPILFA-TSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKD 829 (1560)
Q Consensus 753 ~v~Q~~~lf~-~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~ 829 (1560)
||+|++.++. .|++||+.++... ...++..+ .+.+.++.+ |+....+....+||||||||++|||||+.+
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKE-----EVELLLRVL--GLTDKANKRARTLSGGMKRKLSLAIALIGG 151 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHHhChhhhCCHHHHHHHHHHHHHhcC
Confidence 9999999885 6999999874211 11111111 122334443 444445566679999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 830 PRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 830 p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 152 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 152 PSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999988767999999999999875 999999999999999988764
No 309
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-39 Score=379.98 Aligned_cols=221 Identities=27% Similarity=0.471 Sum_probs=183.4
Q ss_pred cEEEEEEEEEcCCCC--CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCC--------
Q 000406 672 KIEFKGVTFAYPSRP--ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKS-------- 741 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~--~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~-------- 741 (1560)
.|+++|++++|+... ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 388999999997432 1358999999999999999999999999999999999999999999999887632
Q ss_pred ----------------ccHHHHhccEEEEecCC--cCccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCC
Q 000406 742 ----------------LQVKWLRTQIGMVGQEP--ILFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGY 801 (1560)
Q Consensus 742 ----------------~~~~~lr~~i~~v~Q~~--~lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl 801 (1560)
.+...++++||||||+| .+|..||+|||.|+... ...++..+. +.+.++.+ |+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL 154 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKR-----AAKYIELV--GL 154 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CC
Confidence 13356788999999986 67888999999987432 222222221 12234443 55
Q ss_pred C-cccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCE
Q 000406 802 D-TQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANT 878 (1560)
Q Consensus 802 ~-t~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~ 878 (1560)
+ ...+..+.+||||||||++|||||+.+|+||||||||++||+.+...+.+.|+++. .|+|||+|||+++.+.. |||
T Consensus 155 ~~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adr 234 (305)
T PRK13651 155 DESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKR 234 (305)
T ss_pred ChhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCE
Confidence 4 34667788999999999999999999999999999999999999999999998874 58999999999998755 999
Q ss_pred EEEEeCCeEEEecChhhHhhh
Q 000406 879 IVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 879 i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
|++|++|++++.|+++++...
T Consensus 235 v~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 235 TIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred EEEEECCEEEEECCHHHHhcC
Confidence 999999999999999998653
No 310
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-39 Score=372.74 Aligned_cols=217 Identities=31% Similarity=0.516 Sum_probs=181.2
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC-----CCccEEEECCeecCC--ccH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD-----PTKGLITLDGHDLKS--LQV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~-----~~~G~I~i~g~~i~~--~~~ 744 (1560)
.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 4899999999963 358999999999999999999999999999999999974 589999999999864 344
Q ss_pred HHHhccEEEEecCCcCccccHHHHHhcCCCC--C-CH----HHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHH
Q 000406 745 KWLRTQIGMVGQEPILFATSILENVLMGKEN--A-TM----KEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQK 817 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQr 817 (1560)
..+|+.|+|++|++.+|+.|++||+.++... . .. +++.++++..++.+. +....+..+.+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDE-------VKDRLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchh-------hhHHhhCCcccCCHHHH
Confidence 5678899999999999989999999875311 1 11 122222222222111 12345667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 818 QRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 818 QRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
||++|||||+.+|+||||||||++||+.+...+.+.|+++.+++|||++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988668999999999999865 999999999999999999887
Q ss_pred hh
Q 000406 897 LE 898 (1560)
Q Consensus 897 ~~ 898 (1560)
..
T Consensus 236 ~~ 237 (253)
T PRK14242 236 FT 237 (253)
T ss_pred Hc
Confidence 64
No 311
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-39 Score=369.85 Aligned_cols=204 Identities=30% Similarity=0.397 Sum_probs=176.9
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. .+|+.+
T Consensus 12 ~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 5999999999963 35999999999999999999999999999999999999999999999998763 467889
Q ss_pred EEEcCCCCCCC-ccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCC
Q 000406 1393 ALVGQEPALFA-GTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGS 1471 (1560)
Q Consensus 1393 ~~VpQdp~LF~-gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p 1471 (1560)
+|+||++.+|+ .|++||+.++.....++++.++++..++.++. .....+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRA-----------NEWPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHh-----------cCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 69999998753222245566666666654433 3344689999999999999999999
Q ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHH
Q 000406 1472 RVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHE 1535 (1560)
Q Consensus 1472 ~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~ 1535 (1560)
+||||||||++||+.+...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|+|++.|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999998864 36899999999999865 9999999999999988754
No 312
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-39 Score=371.62 Aligned_cols=218 Identities=28% Similarity=0.433 Sum_probs=181.6
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC-----CccEEEECCeecCC--cc
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP-----TKGLITLDGHDLKS--LQ 743 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~-----~~G~I~i~g~~i~~--~~ 743 (1560)
..|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (254)
T PRK14273 6 AIIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD 82 (254)
T ss_pred ceEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc
Confidence 36999999999963 3589999999999999999999999999999999999987 59999999998853 23
Q ss_pred HHHHhccEEEEecCCcCccccHHHHHhcCCCCC---CH----HHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHH
Q 000406 744 VKWLRTQIGMVGQEPILFATSILENVLMGKENA---TM----KEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQ 816 (1560)
Q Consensus 744 ~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~---~~----~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQ 816 (1560)
...+|+.|+||+|++.+|+.||+|||.++.... .. +.+.++++..++.+. +....+..+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LSgG~ 155 (254)
T PRK14273 83 ILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNE-------VKDKLNTNALSLSGGQ 155 (254)
T ss_pred HHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchh-------hHHHHhCCcccCCHHH
Confidence 456788899999999999899999998763211 11 122222333222111 1123345677999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhh
Q 000406 817 KQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQ 895 (1560)
Q Consensus 817 rQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~ 895 (1560)
|||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 235 (254)
T PRK14273 156 QQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDE 235 (254)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999999865 99999999999999999998
Q ss_pred Hhh
Q 000406 896 LLE 898 (1560)
Q Consensus 896 l~~ 898 (1560)
+..
T Consensus 236 ~~~ 238 (254)
T PRK14273 236 LFF 238 (254)
T ss_pred HHh
Confidence 864
No 313
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-39 Score=372.92 Aligned_cols=220 Identities=30% Similarity=0.512 Sum_probs=184.4
Q ss_pred CcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC-----CCccEEEECCeecCC--
Q 000406 669 VSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD-----PTKGLITLDGHDLKS-- 741 (1560)
Q Consensus 669 ~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~-----~~~G~I~i~g~~i~~-- 741 (1560)
..+.|+++|++++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++..
T Consensus 10 ~~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~ 86 (260)
T PRK10744 10 APSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPK 86 (260)
T ss_pred CCceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccc
Confidence 3467999999999963 358999999999999999999999999999999999986 589999999999853
Q ss_pred ccHHHHhccEEEEecCCcCccccHHHHHhcCCCC---CCHH----HHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCCh
Q 000406 742 LQVKWLRTQIGMVGQEPILFATSILENVLMGKEN---ATMK----EAVAACKAASAHSFISELPLGYDTQVGDRGTQLSG 814 (1560)
Q Consensus 742 ~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~---~~~~----~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSg 814 (1560)
.+...+|++|+|++|++.+|+.|++||+.++... .+.+ ++.++++..++. .++...+++...+|||
T Consensus 87 ~~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~~~~~~~~LS~ 159 (260)
T PRK10744 87 QDIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALW-------NEVKDKLHQSGYSLSG 159 (260)
T ss_pred cchHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCC-------hhhHHHHhcCCCCCCH
Confidence 3456778899999999999999999999875321 1222 122222222221 1123445677789999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecCh
Q 000406 815 GQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNH 893 (1560)
Q Consensus 815 GQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~ 893 (1560)
|||||++|||||+.+|+||||||||++||+.+++.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++
T Consensus 160 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 239 (260)
T PRK10744 160 GQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNT 239 (260)
T ss_pred HHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999988668899999999999865 999999999999999999
Q ss_pred hhHhh
Q 000406 894 RQLLE 898 (1560)
Q Consensus 894 ~~l~~ 898 (1560)
+++..
T Consensus 240 ~~~~~ 244 (260)
T PRK10744 240 DTIFT 244 (260)
T ss_pred HHHHh
Confidence 88765
No 314
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=1.4e-39 Score=366.04 Aligned_cols=207 Identities=33% Similarity=0.546 Sum_probs=171.6
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHH---HHhc
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVK---WLRT 749 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~---~lr~ 749 (1560)
|+++|++++|++. .+++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 7899999999632 23589999999999999999999999999999999999999999999999998765433 3677
Q ss_pred cEEEEecCCcCccc-cHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHh
Q 000406 750 QIGMVGQEPILFAT-SILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAM 826 (1560)
Q Consensus 750 ~i~~v~Q~~~lf~~-Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl 826 (1560)
+++|++|++.+|.. |++||+.++... ...++.. ..+.+.++.+ |+.........+||||||||++|||||
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral 153 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDAN-----ERVSAALEKV--GLEGKAHALPMQLSGGEQQRVAIARAI 153 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHH
Confidence 89999999998875 999999875211 1111111 1122334443 444455666679999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeE
Q 000406 827 IKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSV 887 (1560)
Q Consensus 827 ~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~i 887 (1560)
+.+|+||||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++
T Consensus 154 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 154 VHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred hcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999998874 48999999999999875 999999999975
No 315
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-39 Score=372.77 Aligned_cols=214 Identities=24% Similarity=0.420 Sum_probs=186.5
Q ss_pred ccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhc
Q 000406 1312 LGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQ 1391 (1560)
Q Consensus 1312 ~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~ 1391 (1560)
..|+++||+++|++ ..+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+++.
T Consensus 6 ~~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 35999999999963 359999999999999999999999999999999999999999999999999998888888899
Q ss_pred eEEEcCCCCCCC-ccHHHHHhcCC-CC---------CCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000406 1392 TALVGQEPALFA-GTIRDNIALGN-PK---------ASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQR 1460 (1560)
Q Consensus 1392 I~~VpQdp~LF~-gTIreNL~~g~-~~---------~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQR 1460 (1560)
++|+||++.+|. .|++||+.++. +. ..+++++++++..++.++. ......||||||||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Gq~qr 151 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLA-----------DQSVDTLSGGQRQR 151 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHh-----------cCCcccCChHHHHH
Confidence 999999998875 69999998752 11 1123455666666655433 33446899999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1461 IAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1461 LaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
++|||||+++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|+|++.|+++++
T Consensus 152 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (265)
T PRK10253 152 AWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEI 231 (265)
T ss_pred HHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998753 6899999999998866 999999999999999999998
Q ss_pred Hh
Q 000406 1538 LA 1539 (1560)
Q Consensus 1538 l~ 1539 (1560)
..
T Consensus 232 ~~ 233 (265)
T PRK10253 232 VT 233 (265)
T ss_pred hh
Confidence 75
No 316
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=2.4e-39 Score=381.39 Aligned_cols=217 Identities=25% Similarity=0.460 Sum_probs=182.8
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhcc
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQ 750 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~ 750 (1560)
..|+++|++++|++ ..+|+||||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..|++
T Consensus 6 ~~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~-~~~~~ 81 (306)
T PRK13537 6 APIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRAR-HARQR 81 (306)
T ss_pred ceEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchH-HHHhc
Confidence 36999999999963 469999999999999999999999999999999999999999999999999876543 46788
Q ss_pred EEEEecCCcCcc-ccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhc
Q 000406 751 IGMVGQEPILFA-TSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMI 827 (1560)
Q Consensus 751 i~~v~Q~~~lf~-~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~ 827 (1560)
||||||++.++. .|++||+.+.... ....+..+. +.+.++.+ |+.........+||||||||++|||||+
T Consensus 82 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~aL~ 154 (306)
T PRK13537 82 VGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARAL-----VPPLLEFA--KLENKADAKVGELSGGMKRRLTLARALV 154 (306)
T ss_pred EEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCchHhcCchhhCCHHHHHHHHHHHHHh
Confidence 999999999986 5999999863221 122222111 12233332 4444445556789999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 828 KDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 828 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
.+|++|||||||++||+.+++.+++.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 155 ~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 227 (306)
T PRK13537 155 NDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIE 227 (306)
T ss_pred CCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999874 48999999999999976 99999999999999999999865
No 317
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=3e-39 Score=389.64 Aligned_cols=217 Identities=27% Similarity=0.455 Sum_probs=186.1
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|++ +.+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++...++++|
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 4899999999973 4699999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEecCCcC-ccccHHHHHhcCCCCC-------CHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHH
Q 000406 752 GMVGQEPIL-FATSILENVLMGKENA-------TMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALA 823 (1560)
Q Consensus 752 ~~v~Q~~~l-f~~Tv~eNi~~g~~~~-------~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialA 823 (1560)
+||+|++.+ ++.|++||+.++.... ..+. ...+++.++.+ |+.........+||||||||++||
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~------~~~v~~~le~v--gl~~~~~~~~~~LSgGerQRv~IA 151 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETD------RAAVERAMERT--GVAQFADRPVTSLSGGERQRVLLA 151 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHH------HHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHH
Confidence 999999987 4669999999875211 1110 11112223332 444445666789999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 824 RAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 824 RAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
|||+++|+||||||||++||+.++..+.+.|+++. +++|+|++||+++.+.. |||+++|++|++++.|++++++..
T Consensus 152 rAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 152 RALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 99999999999999999999999999999999884 58999999999999965 999999999999999999998753
No 318
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-39 Score=371.45 Aligned_cols=217 Identities=32% Similarity=0.550 Sum_probs=183.8
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++||+++|++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4789999999741 45899999999999999999999999999999999999999999999999998777777788999
Q ss_pred EEecCCcCcc-ccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCc--ccCCCCCCCChHHHHHHHHHHHhc
Q 000406 753 MVGQEPILFA-TSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDT--QVGDRGTQLSGGQKQRIALARAMI 827 (1560)
Q Consensus 753 ~v~Q~~~lf~-~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t--~~~~~g~~LSgGQrQRialARAl~ 827 (1560)
|++|++.+|+ .|++||+.++... ...++. ...+.+.++.+ |+.. ...+.+.+||||||||++|||||+
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~ 151 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKI-----RERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALA 151 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHh
Confidence 9999999996 5999999875321 111111 11223445554 4443 456777899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 828 KDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 828 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
++|++|||||||++||+.+...+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 152 ~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 225 (242)
T cd03295 152 ADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILR 225 (242)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHc
Confidence 9999999999999999999999999999874 38999999999998765 99999999999999999888754
No 319
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-39 Score=374.49 Aligned_cols=220 Identities=30% Similarity=0.497 Sum_probs=181.4
Q ss_pred cEEEEEEEEEcCCCC--CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCC----CHH
Q 000406 1313 GIELKMVTFTYPSRP--EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREI----NVK 1386 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~--~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i----~l~ 1386 (1560)
.|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996321 13599999999999999999999999999999999999999999999999998653 345
Q ss_pred HHhhceEEEcCCC--CCCCccHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCCccc-cccCCCCCCChHHHHHH
Q 000406 1387 WLRKQTALVGQEP--ALFAGTIRDNIALGNP--KASWAEIEEAAEEAYIHKFISSLPQGYET-QVGESGVQLSGGQKQRI 1461 (1560)
Q Consensus 1387 ~LR~~I~~VpQdp--~LF~gTIreNL~~g~~--~~sd~eI~~al~~a~l~~~I~~Lp~Gldt-~Vge~G~~LSGGQrQRL 1461 (1560)
..|+.++|+||+| .+|..|++|||.++.. ..+.++..+. +.+++..+ |++. ........||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl 154 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEK-----ALKWLKKV--GLSEDLISKSPFELSGGQMRRV 154 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhHhhCCcccCCHHHHHHH
Confidence 6788999999998 5888899999986421 2222222111 12223332 3431 23444568999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1462 AIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1462 aLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
+|||||+.+|++|||||||++||+.+.+.+.+.|+++. ++.|+|+|||+++.+.. ||+|++|++|++++.|+++++++
T Consensus 155 ~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 155 AIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999875 46899999999999865 99999999999999999999875
No 320
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.1e-39 Score=368.97 Aligned_cols=217 Identities=31% Similarity=0.505 Sum_probs=186.6
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCEecCCC--CH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD-----PNQGKVMIEGVDLREI--NV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~-----p~~G~I~IdGvdi~~i--~l 1385 (1560)
.++++||++.|++ .++|+|+||+|++||++||+|+||||||||+++|+|+.+ |++|+|.+||.++... +.
T Consensus 3 ~l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 3789999999963 359999999999999999999999999999999999974 4899999999998753 45
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCCC--CC-CH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGNP--KA-SW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~~-sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
..+|+.++|+||++.+|.+|++||+.++.. .. +. +++.++++.+++.+++.. .+...+..||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKD-------KLDKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHH-------HHhCCcccCCHHHH
Confidence 678899999999999999999999986421 11 11 335556666666555432 12344568999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||+||||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999877 899999999999999999999
Q ss_pred Hh
Q 000406 1538 LA 1539 (1560)
Q Consensus 1538 l~ 1539 (1560)
..
T Consensus 233 ~~ 234 (250)
T PRK14266 233 FI 234 (250)
T ss_pred Hh
Confidence 76
No 321
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=6.6e-39 Score=365.47 Aligned_cols=210 Identities=37% Similarity=0.529 Sum_probs=180.2
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++|++++|+. +++|+|+||+|.+||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. .++.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 579999999963 359999999999999999999999999999999999999999999999999986653 478899
Q ss_pred EEcCCCCCCCc-cHHHHHhcCCC--CCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000406 1394 LVGQEPALFAG-TIRDNIALGNP--KAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARA 1466 (1560)
Q Consensus 1394 ~VpQdp~LF~g-TIreNL~~g~~--~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARA 1466 (1560)
|+||++.+|++ |++||+.++.. ..+ ++++.++++..++.++. .....+||+||+||++||||
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~lS~G~~qrl~lara 144 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLG-----------DRYPNQLSGGQRQRVALARA 144 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHh-----------hCChhhCCHHHHHHHHHHHH
Confidence 99999999975 99999986432 111 22344444444444333 23345799999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1467 ILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1467 LLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|+++|+||||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++
T Consensus 145 l~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 220 (237)
T TIGR00968 145 LAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYD 220 (237)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHc
Confidence 9999999999999999999999999999998654 6899999999999866 99999999999999999999986
No 322
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=5.1e-39 Score=370.78 Aligned_cols=212 Identities=27% Similarity=0.441 Sum_probs=183.5
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
++++|+++.|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+.++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 789999999963 36999999999999999999999999999999999999999999999999999988888888999
Q ss_pred EEcCCCC-CCCccHHHHHhcCCCC----------CCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHH
Q 000406 1394 LVGQEPA-LFAGTIRDNIALGNPK----------ASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIA 1462 (1560)
Q Consensus 1394 ~VpQdp~-LF~gTIreNL~~g~~~----------~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLa 1462 (1560)
|+||++. .+..|++||+.++... ..++++.++++..++.+. .......||||||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~ 147 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHL-----------ADRDMSTLSGGERQRVH 147 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhh-----------hcCCcccCCHHHHHHHH
Confidence 9999985 4568999999875210 012234555555555433 23344579999999999
Q ss_pred HHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC-CceEEEEecChHHHh-hcCEEEEEeCCEEEEecCHHHHHh
Q 000406 1463 IARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK-RATTIVVAHRLSTIR-EANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1463 LARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~-~~TvI~IAHRlsti~-~aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
||||++.+|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 148 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 148 VARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 99999999999999999999999999999999998753 689999999999995 499999999999999999999875
No 323
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3e-39 Score=386.58 Aligned_cols=201 Identities=28% Similarity=0.434 Sum_probs=172.4
Q ss_pred ccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCE----ecCCCCHHHHh----hceEEEcCCCC
Q 000406 1329 VTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGV----DLREINVKWLR----KQTALVGQEPA 1400 (1560)
Q Consensus 1329 ~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGv----di~~i~l~~LR----~~I~~VpQdp~ 1400 (1560)
..+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. ++...+...+| ++|+||||++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 35899999999999999999999999999999999999999999999996 67777665543 57999999999
Q ss_pred CCC-ccHHHHHhcCCC--CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCE
Q 000406 1401 LFA-GTIRDNIALGNP--KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRV 1473 (1560)
Q Consensus 1401 LF~-gTIreNL~~g~~--~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~I 1473 (1560)
+|+ .|++||+.++.. ..+. +++.++++.+++.++... ...+||||||||++|||||+.+|+|
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~-----------~~~~LSgGq~QRV~LARALa~~P~I 185 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADK-----------KPGELSGGMQQRVGLARAFAMDADI 185 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcC-----------ChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 997 799999987531 1222 334556666665544332 3347999999999999999999999
Q ss_pred EEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000406 1474 LLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLAS 1540 (1560)
Q Consensus 1474 LILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~ 1540 (1560)
||||||||+||+.+.+.+++.|+++.+ ++|+|+|||+++.+.. ||||++|++|++++.|++++++.+
T Consensus 186 LLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 186 LLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 999999999999999999999998754 7899999999999855 999999999999999999999873
No 324
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-39 Score=368.59 Aligned_cols=217 Identities=28% Similarity=0.439 Sum_probs=184.9
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCEecC-CCCHH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP-----NQGKVMIEGVDLR-EINVK 1386 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p-----~~G~I~IdGvdi~-~i~l~ 1386 (1560)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.++|.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4889999999963 4599999999999999999999999999999999999986 5999999999986 45667
Q ss_pred HHhhceEEEcCCCCCCCccHHHHHhcCCC--CCC-H----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000406 1387 WLRKQTALVGQEPALFAGTIRDNIALGNP--KAS-W----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQ 1459 (1560)
Q Consensus 1387 ~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~~s-d----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQ 1459 (1560)
.+|+.++|+||++.+|..|++||+.++.. ... . +++.++++.+++.+.+ ..........|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEV-------KDRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhh-------hHHhhcCcccCCHHHHH
Confidence 78899999999999999999999986521 111 1 2334444444443322 22334455689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHH
Q 000406 1460 RIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLL 1538 (1560)
Q Consensus 1460 RLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl 1538 (1560)
|++|||||+.+|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|+|++.|+++++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777899999999999876 9999999999999999999987
Q ss_pred h
Q 000406 1539 A 1539 (1560)
Q Consensus 1539 ~ 1539 (1560)
.
T Consensus 233 ~ 233 (249)
T PRK14253 233 S 233 (249)
T ss_pred c
Confidence 5
No 325
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-39 Score=374.42 Aligned_cols=212 Identities=29% Similarity=0.430 Sum_probs=180.3
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecC--CCCHHHHhhc
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLR--EINVKWLRKQ 1391 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~--~i~l~~LR~~ 1391 (1560)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. ..+...+|+.
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 789999999963 35999999999999999999999999999999999999999999999999985 3345677889
Q ss_pred eEEEcCCCC--CCCccHHHHHhcCC--CCCCHH----HHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000406 1392 TALVGQEPA--LFAGTIRDNIALGN--PKASWA----EIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAI 1463 (1560)
Q Consensus 1392 I~~VpQdp~--LF~gTIreNL~~g~--~~~sd~----eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaL 1463 (1560)
++||||++. +|..|+.+|+.++. ...+.+ ++.++++..++.++. ......||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFR-----------HQPIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHh-----------cCCchhCCHHHHHHHHH
Confidence 999999985 67789999998641 112222 334455555554332 22345799999999999
Q ss_pred HHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1464 ARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1464 ARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
||||+.+|+||||||||++||+.+...+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFA 225 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999864 47899999999999865 99999999999999999999875
No 326
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=2.4e-39 Score=368.14 Aligned_cols=216 Identities=25% Similarity=0.457 Sum_probs=183.6
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHH-HhccE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKW-LRTQI 751 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~-lr~~i 751 (1560)
|+++||+++|++ ..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+... .++.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 578999999963 45899999999999999999999999999999999999999999999999987766544 35679
Q ss_pred EEEecCCcCccc-cHHHHHhcCCCCC--CHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhcc
Q 000406 752 GMVGQEPILFAT-SILENVLMGKENA--TMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIK 828 (1560)
Q Consensus 752 ~~v~Q~~~lf~~-Tv~eNi~~g~~~~--~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~ 828 (1560)
+|++|++.+|+. |++||+.++.... ..++.. ..+.+.++.+ |++......+.+||||||||++|||||+.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKERE-----EKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999986 9999998753211 111111 1223445554 66666677788999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 829 DPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 829 ~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999998874 48999999999988765 99999999999999999887753
No 327
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-39 Score=374.02 Aligned_cols=221 Identities=27% Similarity=0.444 Sum_probs=185.3
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++||+++|+.....++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.|
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743334589999999999999999999999999999999999999999999999999877766788899
Q ss_pred EEEecCCc--CccccHHHHHhcCCC--CCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhc
Q 000406 752 GMVGQEPI--LFATSILENVLMGKE--NATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMI 827 (1560)
Q Consensus 752 ~~v~Q~~~--lf~~Tv~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~ 827 (1560)
+||+|+|. ++..||.|||.++.. ....++..+.+ .+.++.+ |+.......+.+||||||||++|||||+
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lAraL~ 156 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRV-----DEALLAV--NMLDFKTREPARLSGGQKQRVAVAGIIA 156 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHH-----HHHHHHC--CCHhHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999983 567799999987532 12222222111 1222222 3434445567799999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhh
Q 000406 828 KDPRILLLDEPTSALDSESESIVQQAIDKISV--GRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 828 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
++|+||||||||++||+.+.+.+.+.|+++.+ |+|+|+|||+++.+..||+|++|++|++++.|++++++..
T Consensus 157 ~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 157 LRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999988743 8999999999999878999999999999999999988754
No 328
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-39 Score=376.09 Aligned_cols=219 Identities=28% Similarity=0.492 Sum_probs=184.4
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecC--CccHHHHhc
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLK--SLQVKWLRT 749 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~--~~~~~~lr~ 749 (1560)
.|+++|++++|+. +..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++. ..+...+++
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 4899999999963 245999999999999999999999999999999999999999999999999984 334556788
Q ss_pred cEEEEecCC--cCccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHH
Q 000406 750 QIGMVGQEP--ILFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARA 825 (1560)
Q Consensus 750 ~i~~v~Q~~--~lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARA 825 (1560)
.|+|+||++ .+++.|++||+.++... .+.++..+. +.+.++.+ |+....+..+.+||||||||++||||
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LS~G~~qrl~lara 155 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKR-----VDNALKRT--GIEHLKDKPTHCLSFGQKKRVAIAGV 155 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHC--CChhhhhCCcccCCHHHHHHHHHHHH
Confidence 999999998 56788999999875321 122222111 12223333 55555667788999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 826 MIKDPRILLLDEPTSALDSESESIVQQAIDKISV--GRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 826 l~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
|+.+|+||||||||++||+.+...+.+.|+++.+ |+|||++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 156 L~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 156 LVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999988743 8999999999999874 999999999999999999988653
No 329
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-39 Score=371.05 Aligned_cols=219 Identities=27% Similarity=0.459 Sum_probs=187.3
Q ss_pred CccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCEecC----
Q 000406 1311 PLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP-----NQGKVMIEGVDLR---- 1381 (1560)
Q Consensus 1311 ~~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p-----~~G~I~IdGvdi~---- 1381 (1560)
.+.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+.+| ++|+|.+||.++.
T Consensus 14 ~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~~ 90 (265)
T PRK14252 14 QQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILSP 90 (265)
T ss_pred CceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccccc
Confidence 456999999999963 3599999999999999999999999999999999999975 7999999998874
Q ss_pred CCCHHHHhhceEEEcCCCCCCCccHHHHHhcCCC--C-----CCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCC
Q 000406 1382 EINVKWLRKQTALVGQEPALFAGTIRDNIALGNP--K-----ASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLS 1454 (1560)
Q Consensus 1382 ~i~l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~-----~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LS 1454 (1560)
......+|+.++|+||++.+|.+|++|||.++.. . ..++++.++++.+++.+ ++..........||
T Consensus 91 ~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS 163 (265)
T PRK14252 91 EVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWD-------EVKDRLGDLAFNLS 163 (265)
T ss_pred ccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCch-------hhhHHHhCCcccCC
Confidence 2345678889999999999999999999986421 1 11245556666555433 22333445567899
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecC
Q 000406 1455 GGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGS 1533 (1560)
Q Consensus 1455 GGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt 1533 (1560)
||||||++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 164 ~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g~ 243 (265)
T PRK14252 164 GGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFGA 243 (265)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999988777899999999999965 99999999999999999
Q ss_pred HHHHHh
Q 000406 1534 HETLLA 1539 (1560)
Q Consensus 1534 ~~eLl~ 1539 (1560)
++++..
T Consensus 244 ~~~~~~ 249 (265)
T PRK14252 244 TDTIFI 249 (265)
T ss_pred HHHHHh
Confidence 999976
No 330
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2e-39 Score=363.97 Aligned_cols=198 Identities=31% Similarity=0.489 Sum_probs=168.1
Q ss_pred EEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceEE
Q 000406 1315 ELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTAL 1394 (1560)
Q Consensus 1315 ~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~ 1394 (1560)
+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. .+|+.++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 46899999963 35999999999999999999999999999999999999999999999998874 46889999
Q ss_pred EcCCCCC---CCccHHHHHhcCCCC----------CCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000406 1395 VGQEPAL---FAGTIRDNIALGNPK----------ASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRI 1461 (1560)
Q Consensus 1395 VpQdp~L---F~gTIreNL~~g~~~----------~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRL 1461 (1560)
+||++.+ |+.|++|||.++... ...+++.++++..++.++... ...+||||||||+
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv 141 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADR-----------QIGELSGGQQQRV 141 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhC-----------CcccCCHHHHHHH
Confidence 9999986 668999999875321 012345566666666544332 3357999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEec
Q 000406 1462 AIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYG 1532 (1560)
Q Consensus 1462 aLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~G 1532 (1560)
+|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 142 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 142 LLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999999999999865 57899999999999876 8999999986 55554
No 331
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-39 Score=376.77 Aligned_cols=221 Identities=30% Similarity=0.465 Sum_probs=181.1
Q ss_pred ccEEEEEEEEEcCCCC--CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCC----C-C
Q 000406 1312 LGIELKMVTFTYPSRP--EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLRE----I-N 1384 (1560)
Q Consensus 1312 ~~I~~~nVsf~Y~~~~--~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~----i-~ 1384 (1560)
+.|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.. . +
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 4699999999996432 1359999999999999999999999999999999999999999999999999852 2 4
Q ss_pred HHHHhhceEEEcCCC--CCCCccHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCCcc-ccccCCCCCCChHHHH
Q 000406 1385 VKWLRKQTALVGQEP--ALFAGTIRDNIALGNP--KASWAEIEEAAEEAYIHKFISSLPQGYE-TQVGESGVQLSGGQKQ 1459 (1560)
Q Consensus 1385 l~~LR~~I~~VpQdp--~LF~gTIreNL~~g~~--~~sd~eI~~al~~a~l~~~I~~Lp~Gld-t~Vge~G~~LSGGQrQ 1459 (1560)
...+|+.|+|+||+| .+|..|++|||.++.. ....++..+.+ .+.+..+ |+. .........|||||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~ll~~~--~L~~~~~~~~~~~LS~Gq~q 157 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKV-----PELLKLV--QLPEDYVKRSPFELSGGQKR 157 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCChhHhcCChhhCCHHHHH
Confidence 567888999999998 4778899999987521 12333322221 1122221 221 1233455689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHH
Q 000406 1460 RIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHET 1536 (1560)
Q Consensus 1460 RLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~e 1536 (1560)
|++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 158 rv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 237 (289)
T PRK13645 158 RVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFE 237 (289)
T ss_pred HHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999998753 7899999999998865 99999999999999999998
Q ss_pred HHh
Q 000406 1537 LLA 1539 (1560)
Q Consensus 1537 Ll~ 1539 (1560)
+++
T Consensus 238 ~~~ 240 (289)
T PRK13645 238 IFS 240 (289)
T ss_pred Hhc
Confidence 865
No 332
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-39 Score=374.48 Aligned_cols=220 Identities=30% Similarity=0.516 Sum_probs=185.5
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++||+++|+.. .+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++.|
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 48999999999642 24599999999999999999999999999999999999999999999999999887777778899
Q ss_pred EEEecCC--cCccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhc
Q 000406 752 GMVGQEP--ILFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMI 827 (1560)
Q Consensus 752 ~~v~Q~~--~lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~ 827 (1560)
+|++|++ .++..||+|||.++... ...++..+ .+.+.+..+ |+...+.....+||||||||++|||||+
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LS~G~~qrv~laral~ 156 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVE-----RVDQALRQV--GMEDFLNREPHRLSGGQKQRVAIAGVLA 156 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHH-----HHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHH
Confidence 9999998 45567999999886321 12222111 112223332 4445556667799999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhh
Q 000406 828 KDPRILLLDEPTSALDSESESIVQQAIDKISV--GRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 828 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
.+|+||||||||++||+.+...+.+.|+++.+ |+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 157 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 157 LQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999998753 8999999999999888999999999999999999888654
No 333
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-39 Score=359.36 Aligned_cols=217 Identities=33% Similarity=0.505 Sum_probs=187.2
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCE---ecCCCCHHHHh
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGV---DLREINVKWLR 1389 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGv---di~~i~l~~LR 1389 (1560)
.|+++|++..|+. ..+++||||+|+.||.+|+.||||||||||+++|+|+..|++|.|.+||. |.++++ .-.
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~--~~~ 76 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLA--VRD 76 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccc--hhh
Confidence 3788899998864 35899999999999999999999999999999999999999999999999 766633 334
Q ss_pred hceEEEcCCCCCCC-ccHHHHHhcCCC--------CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000406 1390 KQTALVGQEPALFA-GTIRDNIALGNP--------KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQR 1460 (1560)
Q Consensus 1390 ~~I~~VpQdp~LF~-gTIreNL~~g~~--------~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQR 1460 (1560)
++||+|+|+..||. .||++||.||.+ ......+.+.|+.++|..+-+..| .+||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHH
Confidence 68999999999885 799999999852 122345666677777766555544 4799999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1461 IAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1461 LaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
+||||||...|++|+||||.++||+.-.+.+.+-|++... +.|+++|||+.+.+.. ||||+||++|+|...|+|+|.
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 9999999999999999999999999999999999998643 6899999999999865 999999999999999999999
Q ss_pred HhhccChHH
Q 000406 1538 LASHLNGVY 1546 (1560)
Q Consensus 1538 l~~~~~g~y 1546 (1560)
... .++.|
T Consensus 226 ~~~-P~s~f 233 (345)
T COG1118 226 YDH-PASRF 233 (345)
T ss_pred hcC-CCccc
Confidence 873 45544
No 334
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-39 Score=364.35 Aligned_cols=214 Identities=28% Similarity=0.479 Sum_probs=179.4
Q ss_pred cEEEEEEEEEcCCCC-CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHH---H
Q 000406 672 KIEFKGVTFAYPSRP-ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKW---L 747 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~-~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~---l 747 (1560)
.|+++||+++|+... ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997422 146999999999999999999999999999999999999999999999999998776543 3
Q ss_pred h-ccEEEEecCCcCccc-cHHHHHhcCCC--CCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHH
Q 000406 748 R-TQIGMVGQEPILFAT-SILENVLMGKE--NATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALA 823 (1560)
Q Consensus 748 r-~~i~~v~Q~~~lf~~-Tv~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialA 823 (1560)
+ +.|+|++|++.+|+. |++||+.++.. ....++..+ .+.+.++.+ |++......+.+||||||||++||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrl~la 157 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINS-----RALEMLAAV--GLEHRANHRPSELSGGERQRVAIA 157 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHH
Confidence 3 679999999998876 99999987421 111121111 122334444 566666777889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCccccccCCEEEEEeCCeEEEecC
Q 000406 824 RAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGN 892 (1560)
Q Consensus 824 RAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~ 892 (1560)
||++.+|+||||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+..+|++++|++|++++.|+
T Consensus 158 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 158 RALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 99999999999999999999999999999999873 4899999999999998889999999999998775
No 335
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=5.4e-39 Score=378.86 Aligned_cols=212 Identities=26% Similarity=0.414 Sum_probs=179.9
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++||+++|++ .++|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...+|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999998754 35678899
Q ss_pred EEEcCCCCCCC-ccHHHHHhcCC--CCCCHHHHHH----HHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000406 1393 ALVGQEPALFA-GTIRDNIALGN--PKASWAEIEE----AAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIAR 1465 (1560)
Q Consensus 1393 ~~VpQdp~LF~-gTIreNL~~g~--~~~sd~eI~~----al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLAR 1465 (1560)
+|+||++.+|. .|++||+.+.. ...+..+..+ +++..+ +++.+++.+ ..||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~-------l~~~~~~~~----~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFAR-------LESKADVRV----ALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCC-------ChhHhcCch----hhCCHHHHHHHHHHH
Confidence 99999999885 69999997421 1123333322 222222 233344444 479999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1466 AILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1466 ALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
||+.+|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++++
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 9999999999999999999999999999999864 47899999999999976 99999999999999999999976
No 336
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=4.6e-39 Score=366.72 Aligned_cols=216 Identities=29% Similarity=0.522 Sum_probs=183.8
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... ++.++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 789999999963 45999999999999999999999999999999999999999999999999987765543 35899
Q ss_pred EEecCCcCc-cccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccC
Q 000406 753 MVGQEPILF-ATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKD 829 (1560)
Q Consensus 753 ~v~Q~~~lf-~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~ 829 (1560)
|++|++.++ ..|++||+.++... ...++.. ..+.++++.+ |++...+..+.+||||||||++|||||+++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEAR-----ERIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 999999875 46999999875321 1111111 1223445554 666667778889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhh
Q 000406 830 PRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 830 p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
|+||||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999874 48999999999999877999999999999999998887653
No 337
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=359.97 Aligned_cols=218 Identities=33% Similarity=0.524 Sum_probs=187.1
Q ss_pred cEEEEEEEEEcCCCCC---------------------ccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCcc
Q 000406 672 KIEFKGVTFAYPSRPE---------------------TVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKG 730 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~---------------------~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G 730 (1560)
.|+++||++-|+.++. ..-++|+||+|+.||+..|.|-||||||||+++|.|+++|+.|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 5899999998864321 2348899999999999999999999999999999999999999
Q ss_pred EEEECCeecCCccHHHHh----ccEEEEecCCcCccc-cHHHHHhcCCCCCC--H----HHHHHHHHHhhhHHHHHhCCC
Q 000406 731 LITLDGHDLKSLQVKWLR----TQIGMVGQEPILFAT-SILENVLMGKENAT--M----KEAVAACKAASAHSFISELPL 799 (1560)
Q Consensus 731 ~I~i~g~~i~~~~~~~lr----~~i~~v~Q~~~lf~~-Tv~eNi~~g~~~~~--~----~~~~~~~~~~~~~~~i~~l~~ 799 (1560)
+|+++|.|+..++.++|| +++++|+|+..|++. ||.||+.||.+-.. . +...++++.+
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~V----------- 152 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELV----------- 152 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHc-----------
Confidence 999999999999877654 579999999999986 99999999976322 1 2223333333
Q ss_pred CCCcccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-C
Q 000406 800 GYDTQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-A 876 (1560)
Q Consensus 800 gl~t~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~ 876 (1560)
|++..-...+.+||||+||||.|||||..+|+|||+|||+|||||--+..+|+.|.++. -+||+|+||||+++... .
T Consensus 153 gL~~~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 153 GLEGYADKYPNELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred CchhhhhcCcccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 45555556677999999999999999999999999999999999999999999998774 37999999999999755 9
Q ss_pred CEEEEEeCCeEEEecChhhHhhhc
Q 000406 877 NTIVVLDQGSVVEIGNHRQLLERG 900 (1560)
Q Consensus 877 D~i~vl~~G~iv~~G~~~~l~~~~ 900 (1560)
|||.+|++|+|+..|+|+|++.+.
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~P 256 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNP 256 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCc
Confidence 999999999999999999998653
No 338
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.9e-39 Score=365.48 Aligned_cols=208 Identities=34% Similarity=0.542 Sum_probs=174.3
Q ss_pred EEEEEEEEEcCCCC-CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHH----HH
Q 000406 673 IEFKGVTFAYPSRP-ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVK----WL 747 (1560)
Q Consensus 673 i~~~~vs~~y~~~~-~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~----~l 747 (1560)
|+++||+++|+... ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ..
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 47899999996421 14699999999999999999999999999999999999999999999999998876532 24
Q ss_pred hccEEEEecCCcCccc-cHHHHHhcCCCCC--CHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHH
Q 000406 748 RTQIGMVGQEPILFAT-SILENVLMGKENA--TMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALAR 824 (1560)
Q Consensus 748 r~~i~~v~Q~~~lf~~-Tv~eNi~~g~~~~--~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialAR 824 (1560)
+++++|++|++.+|.. |++||+.++.... ...+. ...+.+.++.+ |++...+..+.+||||||||++|||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~ 153 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKER-----RERAEELLERV--GLGDRLNHYPSELSGGQQQRVAIAR 153 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHH-----HHHHHHHHHHc--CCchhhhcChhhcCHHHHHHHHHHH
Confidence 5689999999999986 9999998854211 11111 11223445554 6666667778899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCccccccCCEEEEEeCCeE
Q 000406 825 AMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKNANTIVVLDQGSV 887 (1560)
Q Consensus 825 Al~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~~D~i~vl~~G~i 887 (1560)
||+.+|+||||||||++||+.+++.+.+.|+++. .++|+|+|||+++.+..||+|++|++|++
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 154 ALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 9999999999999999999999999999999874 38999999999998878999999999974
No 339
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-38 Score=366.77 Aligned_cols=218 Identities=28% Similarity=0.454 Sum_probs=181.7
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCC-----ccEEEECCEecCC--CCH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPN-----QGKVMIEGVDLRE--INV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~-----~G~I~IdGvdi~~--i~l 1385 (1560)
-++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 3889999999963 46999999999999999999999999999999999999874 8999999999875 345
Q ss_pred HHHhhceEEEcCCCCCCC-ccHHHHHhcCCC--CC-CHHHHHHH----HHHHhHHHHHHhCCCCccccccCCCCCCChHH
Q 000406 1386 KWLRKQTALVGQEPALFA-GTIRDNIALGNP--KA-SWAEIEEA----AEEAYIHKFISSLPQGYETQVGESGVQLSGGQ 1457 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~-gTIreNL~~g~~--~~-sd~eI~~a----l~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQ 1457 (1560)
..+|+.++|+||++.+|. .|++||+.++.. .. .++++.+. ++..++.+. ++..++.+ ..+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~---l~~~~~~~----~~~LS~G~ 153 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDE---VKDRLKTP----ATGLSGGQ 153 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchh---hhhhhcCC----cccCCHHH
Confidence 577889999999999998 499999986421 11 23333322 222222221 12233433 45799999
Q ss_pred HHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHH
Q 000406 1458 KQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHET 1536 (1560)
Q Consensus 1458 rQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~e 1536 (1560)
|||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 154 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14272 154 QQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQ 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988777999999999999986 99999999999999999999
Q ss_pred HHhh
Q 000406 1537 LLAS 1540 (1560)
Q Consensus 1537 Ll~~ 1540 (1560)
++++
T Consensus 234 ~~~~ 237 (252)
T PRK14272 234 LFTN 237 (252)
T ss_pred HHhC
Confidence 9873
No 340
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=370.09 Aligned_cols=219 Identities=32% Similarity=0.464 Sum_probs=186.3
Q ss_pred ccEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCEecCC--CC
Q 000406 1312 LGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP-----NQGKVMIEGVDLRE--IN 1384 (1560)
Q Consensus 1312 ~~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p-----~~G~I~IdGvdi~~--i~ 1384 (1560)
.-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 19 SVFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred ceEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 36999999999963 3599999999999999999999999999999999999863 68999999999864 34
Q ss_pred HHHHhhceEEEcCCCCCCCccHHHHHhcCCCC-----CCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHH
Q 000406 1385 VKWLRKQTALVGQEPALFAGTIRDNIALGNPK-----ASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQ 1459 (1560)
Q Consensus 1385 l~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~-----~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQ 1459 (1560)
...+|+.|+|+||++.+|+.|+.+||.++... ..++++.++++.+++.+.+.. ........|||||||
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~q 168 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKD-------KLKEKGTALSGGQQQ 168 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHH-------HhcCCcccCCHHHHH
Confidence 45678999999999999999999999875211 113345556666665443321 233445689999999
Q ss_pred HHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEe---------CCEEE
Q 000406 1460 RIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVR---------DGAVV 1529 (1560)
Q Consensus 1460 RLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd---------~G~Iv 1529 (1560)
|++|||||+++|+||||||||++||+.+...+.+.|++..+++|||+|||+++.+.. ||+|++|+ +|+++
T Consensus 169 rv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~ 248 (274)
T PRK14265 169 RLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLV 248 (274)
T ss_pred HHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 999999999999999999999999999999999999998777899999999999865 99999997 89999
Q ss_pred EecCHHHHHhh
Q 000406 1530 EYGSHETLLAS 1540 (1560)
Q Consensus 1530 E~Gt~~eLl~~ 1540 (1560)
+.|+++++..+
T Consensus 249 ~~g~~~~~~~~ 259 (274)
T PRK14265 249 EFSPTEQMFGS 259 (274)
T ss_pred EeCCHHHHHhC
Confidence 99999999863
No 341
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.7e-39 Score=366.47 Aligned_cols=210 Identities=34% Similarity=0.515 Sum_probs=182.1
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 579999999963 359999999999999999999999999999999999999999999999999987664 367899
Q ss_pred EEcCCCCCCCc-cHHHHHhcCC------CCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000406 1394 LVGQEPALFAG-TIRDNIALGN------PKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARA 1466 (1560)
Q Consensus 1394 ~VpQdp~LF~g-TIreNL~~g~------~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARA 1466 (1560)
|+||++.+|.+ |+++|+.++. +...++++.++++..++.+++... ...||+|||||++||||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~lS~G~~qrl~lara 144 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRK-----------PSQLSGGQQQRVAIARA 144 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCC-----------hhhCCHHHHHHHHHHHH
Confidence 99999999975 9999998642 111123455566666665554443 35799999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1467 ILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1467 LLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 145 l~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~ 220 (232)
T cd03300 145 LVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYE 220 (232)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHh
Confidence 9999999999999999999999999999998753 7899999999999866 99999999999999999999886
No 342
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-39 Score=368.78 Aligned_cols=220 Identities=20% Similarity=0.387 Sum_probs=184.2
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHH-hhc
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWL-RKQ 1391 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~L-R~~ 1391 (1560)
-++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+ |..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 4899999999963 469999999999999999999999999999999999999999999999999988876654 456
Q ss_pred eEEEcCCCCCCCc-cHHHHHhcCCCCCC--------------HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChH
Q 000406 1392 TALVGQEPALFAG-TIRDNIALGNPKAS--------------WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGG 1456 (1560)
Q Consensus 1392 I~~VpQdp~LF~g-TIreNL~~g~~~~s--------------d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGG 1456 (1560)
++|+||++.+|.+ |++|||.++..... ..+..+ ....+.++++.+ |++........+||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~--gl~~~~~~~~~~LS~G 157 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESE--ALDRAATWLERV--GLLEHANRQAGNLAYG 157 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhH--HHHHHHHHHHhC--ChhhhhhCChhhCCHH
Confidence 9999999999986 99999987521000 000000 011223344443 5555556667789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecC
Q 000406 1457 QKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGS 1533 (1560)
Q Consensus 1457 QrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt 1533 (1560)
||||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+.. ||+|++|++|++++.|+
T Consensus 158 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~ 237 (255)
T PRK11300 158 QQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGT 237 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999999999999999999998643 6899999999999866 99999999999999999
Q ss_pred HHHHHh
Q 000406 1534 HETLLA 1539 (1560)
Q Consensus 1534 ~~eLl~ 1539 (1560)
++++..
T Consensus 238 ~~~~~~ 243 (255)
T PRK11300 238 PEEIRN 243 (255)
T ss_pred HHHHhh
Confidence 999875
No 343
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=6.9e-39 Score=363.45 Aligned_cols=208 Identities=28% Similarity=0.370 Sum_probs=176.4
Q ss_pred cEEEEEEEEEcCCCCC-ccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHH---H
Q 000406 1313 GIELKMVTFTYPSRPE-VTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKW---L 1388 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~-~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~---L 1388 (1560)
-|+++||+++|+.... .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... +
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 4899999999964211 25999999999999999999999999999999999999999999999999998887653 2
Q ss_pred -hhceEEEcCCCCCCCc-cHHHHHhcCC--CCCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000406 1389 -RKQTALVGQEPALFAG-TIRDNIALGN--PKAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQR 1460 (1560)
Q Consensus 1389 -R~~I~~VpQdp~LF~g-TIreNL~~g~--~~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQR 1460 (1560)
++.++|+||++.+|.. |++||+.++. .... .+++.++++..++.+++... ...||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHL-----------PAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------hhhCCHHHHHH
Confidence 3679999999999875 9999997531 1111 23455666666665544333 34799999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhhcCEEEEEeCCEEEEe
Q 000406 1461 IAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIREANMIAVVRDGAVVEY 1531 (1560)
Q Consensus 1461 LaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~aDrIlVLd~G~IvE~ 1531 (1560)
++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|||+|||+++.+..||+|++|++|+|+|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999999998743 6899999999999988999999999999874
No 344
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.1e-39 Score=369.45 Aligned_cols=218 Identities=29% Similarity=0.519 Sum_probs=185.3
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCC-----ccEEEECCEecCC--CCH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPN-----QGKVMIEGVDLRE--INV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~-----~G~I~IdGvdi~~--i~l 1385 (1560)
.|+++||+++|+. ..+|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.++|.++.. .+.
T Consensus 7 ~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 7 AIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred eEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 5999999999963 35999999999999999999999999999999999999985 8999999999853 345
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCC------CCCC-HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGN------PKAS-WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~------~~~s-d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
..+|+.++|+||++.+|..|++||+.++. +... ++++.++++..++.+++. ...+..+..||||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~ 156 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIK-------HKIHKSALDLSGGQQ 156 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhh-------hHhcCCcccCCHHHH
Confidence 67888999999999999999999998641 1111 233455666665544332 223455668999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhh-cCEEEEEeC-----CEEEE
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIRE-ANMIAVVRD-----GAVVE 1530 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~-aDrIlVLd~-----G~IvE 1530 (1560)
||++|||||+++|+||||||||++||+++...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++ |+|++
T Consensus 157 qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~ 236 (261)
T PRK14258 157 QRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVE 236 (261)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEE
Confidence 99999999999999999999999999999999999999853 47999999999999875 999999999 99999
Q ss_pred ecCHHHHHhh
Q 000406 1531 YGSHETLLAS 1540 (1560)
Q Consensus 1531 ~Gt~~eLl~~ 1540 (1560)
.|+++++..+
T Consensus 237 ~~~~~~~~~~ 246 (261)
T PRK14258 237 FGLTKKIFNS 246 (261)
T ss_pred eCCHHHHHhC
Confidence 9999999863
No 345
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-39 Score=374.04 Aligned_cols=213 Identities=29% Similarity=0.499 Sum_probs=180.9
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCC--CCHHHHhhc
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLRE--INVKWLRKQ 1391 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~--i~l~~LR~~ 1391 (1560)
|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. .+...+|+.
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 789999999963 2359999999999999999999999999999999999999999999999999853 234567899
Q ss_pred eEEEcCCC--CCCCccHHHHHhcCCC--CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000406 1392 TALVGQEP--ALFAGTIRDNIALGNP--KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAI 1463 (1560)
Q Consensus 1392 I~~VpQdp--~LF~gTIreNL~~g~~--~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaL 1463 (1560)
|+|+||++ .+|..|++|||.++.. ..+. +++.++++..++.++. + .....||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~-------~----~~~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFE-------N----KPPHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhh-------c----CChhhCCHHHHHHHHH
Confidence 99999998 5788999999986421 1222 2344455555443222 2 2345799999999999
Q ss_pred HHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1464 ARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1464 ARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
||||+.+|+||||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++++
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFS 226 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999875 47899999999999875 99999999999999999999875
No 346
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-39 Score=372.63 Aligned_cols=219 Identities=32% Similarity=0.520 Sum_probs=182.6
Q ss_pred cccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC-----CccEEEECCeecCC--c
Q 000406 670 SGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP-----TKGLITLDGHDLKS--L 742 (1560)
Q Consensus 670 ~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~-----~~G~I~i~g~~i~~--~ 742 (1560)
.+.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 457999999999963 4599999999999999999999999999999999999975 89999999999864 3
Q ss_pred cHHHHhccEEEEecCCcCccccHHHHHhcCCCC--C--CHH----HHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCCh
Q 000406 743 QVKWLRTQIGMVGQEPILFATSILENVLMGKEN--A--TMK----EAVAACKAASAHSFISELPLGYDTQVGDRGTQLSG 814 (1560)
Q Consensus 743 ~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~--~--~~~----~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSg 814 (1560)
+...+|+.|+||+|++.+|+.|+.||+.++... . ... ++.++++..++.+++ ....+..+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEV-------KDRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhh-------hHHhhCCcccCCH
Confidence 455678889999999999988999999875311 0 111 122222222221111 1234566789999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecCh
Q 000406 815 GQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNH 893 (1560)
Q Consensus 815 GQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~ 893 (1560)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999988668899999999999865 999999999999999999
Q ss_pred hhHhh
Q 000406 894 RQLLE 898 (1560)
Q Consensus 894 ~~l~~ 898 (1560)
+++..
T Consensus 247 ~~~~~ 251 (267)
T PRK14235 247 EKMFT 251 (267)
T ss_pred HHHHh
Confidence 88764
No 347
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-39 Score=387.99 Aligned_cols=216 Identities=31% Similarity=0.488 Sum_probs=183.9
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. +++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCE
Confidence 4899999999963 4589999999999999999999999999999999999999999999999999876543 4679
Q ss_pred EEEecCCcCccc-cHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhcc
Q 000406 752 GMVGQEPILFAT-SILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIK 828 (1560)
Q Consensus 752 ~~v~Q~~~lf~~-Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~ 828 (1560)
+||+|++.+|+. ||+|||.++... ...++..+ .+.+.++.+ |++...+....+|||||||||+|||||+.
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~l--gL~~~~~~~~~~LSgGq~QRvaLAraL~~ 150 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQ-----RVNQVAEVL--QLAHLLDRKPKALSGGQRQRVAIGRTLVA 150 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999975 999999986431 12222111 122334443 55555677778999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 829 DPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 829 ~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
+|+|||||||||+||+.+++.+.+.|+++. .|.|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 151 ~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 151 EPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999999998874 38999999999998865 999999999999999999998753
No 348
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=3.3e-39 Score=363.50 Aligned_cols=211 Identities=26% Similarity=0.450 Sum_probs=176.9
Q ss_pred EEEEEEEEEcCCCCC-ccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 673 IEFKGVTFAYPSRPE-TVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~-~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
|+++||+++|+.... .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. ....+++++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 789999999974311 169999999999999999999999999999999999999999999999999875 345667899
Q ss_pred EEEecCCcCccc-cHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhcc
Q 000406 752 GMVGQEPILFAT-SILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIK 828 (1560)
Q Consensus 752 ~~v~Q~~~lf~~-Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~ 828 (1560)
+|++|++.+|.. |++||+.+.... ...++..+ .+.+.++.+ |++......+.+||||||||++|||||+.
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~ 153 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTA-----RLEELADRL--GMEELLDRRVGGFSTGMRQKVAIARALVH 153 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHHhhhhhhcCHHHHHHHHHHHHHhc
Confidence 999999999985 999999764211 11111111 122344444 56566677788999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEec
Q 000406 829 DPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIG 891 (1560)
Q Consensus 829 ~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G 891 (1560)
+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 154 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 154 DPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999999998874 58999999999998865 9999999999998754
No 349
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=9.8e-39 Score=359.64 Aligned_cols=210 Identities=29% Similarity=0.497 Sum_probs=186.7
Q ss_pred EEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCH----HHHhh
Q 000406 1315 ELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINV----KWLRK 1390 (1560)
Q Consensus 1315 ~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l----~~LR~ 1390 (1560)
.+.|+.|+|+.+ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 578999999743 469999999999999999999999999999999999999999999999998876542 34567
Q ss_pred ceEEEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccC
Q 000406 1391 QTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKG 1470 (1560)
Q Consensus 1391 ~I~~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~ 1470 (1560)
.++|++|++.+|+.|++|||.++.+ ..+++..++++..++.+.+..+|.|+++.++....+||||||||++|||||+++
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999999999999998643 345667788888899888999999999999988899999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHH--HHHHhc-CCceEEEEecChHHHhhcCEEEEEeCCE
Q 000406 1471 SRVLLLDEASSALDLESEKHVQD--ALRKVS-KRATTIVVAHRLSTIREANMIAVVRDGA 1527 (1560)
Q Consensus 1471 p~ILILDEaTSaLD~~Te~~I~~--~L~~~~-~~~TvI~IAHRlsti~~aDrIlVLd~G~ 1527 (1560)
|+||||||||++||+.+...+.+ .++... .++|+|++||+++.+..||+|++|++|.
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999998887 454433 3689999999999998899999999884
No 350
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=8.1e-39 Score=361.32 Aligned_cols=204 Identities=27% Similarity=0.411 Sum_probs=172.9
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHH---Hhh
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKW---LRK 1390 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~---LR~ 1390 (1560)
|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++..++... +|+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999952 246999999999999999999999999999999999999999999999999998876543 688
Q ss_pred ceEEEcCCCCC-CCccHHHHHhcCC--CCCCHH----HHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000406 1391 QTALVGQEPAL-FAGTIRDNIALGN--PKASWA----EIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAI 1463 (1560)
Q Consensus 1391 ~I~~VpQdp~L-F~gTIreNL~~g~--~~~sd~----eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaL 1463 (1560)
.++|+||++.+ +..|++||+.++. ...+.+ ++.++++..++.+... .....||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~l 148 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAK-----------NFPIQLSGGEQQRVGI 148 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CCchhCCHHHHHHHHH
Confidence 99999999987 4679999998742 122333 3444555555544332 3345799999999999
Q ss_pred HHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEE
Q 000406 1464 ARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVE 1530 (1560)
Q Consensus 1464 ARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE 1530 (1560)
||||+++|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 149 ARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999999999874 46899999999999976 89999999999854
No 351
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.4e-39 Score=358.82 Aligned_cols=201 Identities=32% Similarity=0.526 Sum_probs=174.1
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++|++++|++. . .|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. .|+.++
T Consensus 1 i~~~~l~~~~~~~---~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGEQ---P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCCE---e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 5799999999632 2 39999999999999999999999999999999999999999999999987654 367899
Q ss_pred EEcCCCCCCCc-cHHHHHhcCCC-C-----CCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000406 1394 LVGQEPALFAG-TIRDNIALGNP-K-----ASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARA 1466 (1560)
Q Consensus 1394 ~VpQdp~LF~g-TIreNL~~g~~-~-----~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARA 1466 (1560)
|+||++.+|.+ |++||+.++.. . ..++++.++++..++.+.....| ..||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999975 99999986531 1 12345677777777766554443 3799999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhh-cCEEEEEeCCEEEEec
Q 000406 1467 ILKGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYG 1532 (1560)
Q Consensus 1467 LLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~G 1532 (1560)
|+++|+||||||||++||+++...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999875 37899999999999976 9999999999998865
No 352
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-38 Score=372.64 Aligned_cols=218 Identities=27% Similarity=0.434 Sum_probs=183.2
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCEecCCC--CH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD-----PNQGKVMIEGVDLREI--NV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~-----p~~G~I~IdGvdi~~i--~l 1385 (1560)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +.
T Consensus 39 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~~ 115 (286)
T PRK14275 39 HVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTDE 115 (286)
T ss_pred EEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccch
Confidence 5899999999963 359999999999999999999999999999999999864 4999999999998653 33
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCCC--CC-C----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGNP--KA-S----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~~--~~-s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
..+|+.++||||++.+|.+|++|||.++.. .. + ++++.++++..++.+.+ ..........||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~ 188 (286)
T PRK14275 116 VLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEV-------SDRLDKNALGLSGGQQ 188 (286)
T ss_pred HHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccch-------hhHhhCChhhCCHHHH
Confidence 467889999999999999999999987421 11 1 12344455554443221 1122344567999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+++|||+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 189 qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~~ 268 (286)
T PRK14275 189 QRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQL 268 (286)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988767899999999999866 999999999999999999999
Q ss_pred Hhh
Q 000406 1538 LAS 1540 (1560)
Q Consensus 1538 l~~ 1540 (1560)
.++
T Consensus 269 ~~~ 271 (286)
T PRK14275 269 FTN 271 (286)
T ss_pred HhC
Confidence 863
No 353
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=367.53 Aligned_cols=217 Identities=29% Similarity=0.428 Sum_probs=187.7
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC-----CccEEEECCEecCCC--CH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP-----NQGKVMIEGVDLREI--NV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p-----~~G~I~IdGvdi~~i--~l 1385 (1560)
.+.+++++++|.. .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++... ..
T Consensus 8 ~~~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYGN---FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeCC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 5899999999953 4699999999999999999999999999999999999986 799999999998653 44
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCCC-----CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGNP-----KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQR 1460 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~~-----~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQR 1460 (1560)
..+|+.++|+||++.+|..|++|||.++.. ....+++.++++.+++.+.+.. ..++...+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHHH
Confidence 567889999999999999999999987521 1112456677777766544332 2345566899999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEe--------CCEEEEe
Q 000406 1461 IAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVR--------DGAVVEY 1531 (1560)
Q Consensus 1461 LaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd--------~G~IvE~ 1531 (1560)
++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||||++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 99999999999999999999999999999999999998777899999999999865 99999996 8999999
Q ss_pred cCHHHHHh
Q 000406 1532 GSHETLLA 1539 (1560)
Q Consensus 1532 Gt~~eLl~ 1539 (1560)
|+++++++
T Consensus 238 g~~~~~~~ 245 (261)
T PRK14263 238 GPTAQIFQ 245 (261)
T ss_pred CCHHHHHh
Confidence 99999986
No 354
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=6.3e-39 Score=380.47 Aligned_cols=227 Identities=28% Similarity=0.421 Sum_probs=187.0
Q ss_pred cEEEEEEEEEcCCCC----------CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCC
Q 000406 672 KIEFKGVTFAYPSRP----------ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKS 741 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~----------~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~ 741 (1560)
-|+++|++++|+... ...+|+||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 589999999996321 2468999999999999999999999999999999999999999999999999988
Q ss_pred ccHH---HHhccEEEEecCC--cCcc-ccHHHHHhcCCC----CCCHHHHHHHHHHhhhHHHHHhCCCCCC-cccCCCCC
Q 000406 742 LQVK---WLRTQIGMVGQEP--ILFA-TSILENVLMGKE----NATMKEAVAACKAASAHSFISELPLGYD-TQVGDRGT 810 (1560)
Q Consensus 742 ~~~~---~lr~~i~~v~Q~~--~lf~-~Tv~eNi~~g~~----~~~~~~~~~~~~~~~~~~~i~~l~~gl~-t~~~~~g~ 810 (1560)
++.. .+|++|+||+|+| .|++ .||.|||.++.. ..+.++..+.+ .+.++.+ |++ ...+..+.
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~-----~~~l~~v--gl~~~~~~~~p~ 160 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRV-----KAMMLKV--GLLPNLINRYPH 160 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHc--CCChHHhcCCcc
Confidence 7644 3677899999998 4775 599999975321 12322222211 2234443 442 34567788
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeE
Q 000406 811 QLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSV 887 (1560)
Q Consensus 811 ~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~i 887 (1560)
+|||||||||+|||||+.+|++|||||||++||+.++..+.+.|+++. .+.|+|+|||+++.+.. ||+|+||++|+|
T Consensus 161 ~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~i 240 (331)
T PRK15079 161 EFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHA 240 (331)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999874 38999999999999976 999999999999
Q ss_pred EEecChhhHhhhc-chHHH
Q 000406 888 VEIGNHRQLLERG-GAYHD 905 (1560)
Q Consensus 888 v~~G~~~~l~~~~-~~~~~ 905 (1560)
++.|++++++... ..|.+
T Consensus 241 ve~g~~~~i~~~~~~py~~ 259 (331)
T PRK15079 241 VELGTYDEVYHNPLHPYTK 259 (331)
T ss_pred EEEcCHHHHHcCCCCHHHH
Confidence 9999999987643 34543
No 355
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-38 Score=374.98 Aligned_cols=217 Identities=29% Similarity=0.483 Sum_probs=185.6
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-----CCccEEEECCEecCCC--CH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD-----PNQGKVMIEGVDLREI--NV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~-----p~~G~I~IdGvdi~~i--~l 1385 (1560)
.|+++||+++|+. .++|+++||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++... +.
T Consensus 45 ~l~i~nl~~~~~~---~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~~ 121 (305)
T PRK14264 45 KLSVEDLDVYYGD---DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVNL 121 (305)
T ss_pred eEEEEEEEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccccH
Confidence 5999999999964 359999999999999999999999999999999999986 6899999999998753 45
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCCCC-------------------CCHHHHHHHHHHHhHHHHHHhCCCCccccc
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGNPK-------------------ASWAEIEEAAEEAYIHKFISSLPQGYETQV 1446 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~~~-------------------~sd~eI~~al~~a~l~~~I~~Lp~Gldt~V 1446 (1560)
..+|+.++||||++.+|++||+||+.++... ..++++.++++.+++. .++++.+
T Consensus 122 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~~ 194 (305)
T PRK14264 122 VELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALW-------DEVNDRL 194 (305)
T ss_pred HHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCc-------hhhhHHh
Confidence 6788999999999999999999999865210 0122344444444432 2344455
Q ss_pred cCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEE-EEEe
Q 000406 1447 GESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMI-AVVR 1524 (1560)
Q Consensus 1447 ge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrI-lVLd 1524 (1560)
.....+||||||||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+| ++|+
T Consensus 195 ~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l~ 274 (305)
T PRK14264 195 DDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFLT 274 (305)
T ss_pred cCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEec
Confidence 6667889999999999999999999999999999999999999999999998777899999999999876 9997 5679
Q ss_pred CCEEEEecCHHHHHh
Q 000406 1525 DGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1525 ~G~IvE~Gt~~eLl~ 1539 (1560)
+|+|++.|+++++.+
T Consensus 275 ~G~i~~~g~~~~~~~ 289 (305)
T PRK14264 275 GGELVEYDDTDKIFE 289 (305)
T ss_pred CCEEEEeCCHHHHHh
Confidence 999999999999986
No 356
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-39 Score=363.53 Aligned_cols=213 Identities=24% Similarity=0.438 Sum_probs=177.4
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++|++++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+ ..++++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREP-REVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcCh-HHHhhcEE
Confidence 578999999963 45999999999999999999999999999999999999999999999999886533 45677899
Q ss_pred EEecCCcCccc-cHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccC
Q 000406 753 MVGQEPILFAT-SILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKD 829 (1560)
Q Consensus 753 ~v~Q~~~lf~~-Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~ 829 (1560)
|++|++.+++. |++||+.++... ...++..+ .+.+.++.+ |++........+||||||||++||||++.+
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~la~al~~~ 149 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRE-----RIDELLDFV--GLLEAADRLVKTYSGGMRRRLEIARSLVHR 149 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999998875 999999874211 11111111 122334443 444445566679999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-C-CcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 830 PRILLLDEPTSALDSESESIVQQAIDKIS-V-GRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 830 p~illLDEpts~LD~~~~~~i~~~l~~~~-~-~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
|++|||||||++||+.+.+.+.+.|+++. + ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 150 PEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 99999999999999999999999998874 3 7899999999999876 999999999999999887664
No 357
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.4e-39 Score=384.64 Aligned_cols=217 Identities=31% Similarity=0.509 Sum_probs=185.1
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhcc
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQ 750 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~ 750 (1560)
..|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++|+++.+.+. .++.
T Consensus 18 ~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred ceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 35999999999963 458999999999999999999999999999999999999999999999999987654 4578
Q ss_pred EEEEecCCcCccc-cHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhc
Q 000406 751 IGMVGQEPILFAT-SILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMI 827 (1560)
Q Consensus 751 i~~v~Q~~~lf~~-Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~ 827 (1560)
||||+|++.+|+. ||.|||.++... ....+..+ .+.+.++.+ |+.......+.+|||||||||+|||||+
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~l--~L~~~~~~~~~~LSgGq~QRVaLARAL~ 165 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS-----RVNEMLGLV--HMQEFAKRKPHQLSGGQRQRVALARSLA 165 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHh
Confidence 9999999999986 999999987431 12222211 122334443 5555667778899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 828 KDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 828 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
.+|++||||||||+||+.++..+.+.|+++. .|.|+|+|||+++++.. ||+|++|++|++++.|+++++..+
T Consensus 166 ~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~ 240 (377)
T PRK11607 166 KRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH 240 (377)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC
Confidence 9999999999999999999999998887763 48999999999999765 999999999999999999998764
No 358
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.7e-38 Score=365.77 Aligned_cols=236 Identities=28% Similarity=0.452 Sum_probs=197.7
Q ss_pred HHHHHHccCCCCCCCCCCCCcCCCCcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcC
Q 000406 645 RVFEIIDRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERF 724 (1560)
Q Consensus 645 Ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~ 724 (1560)
.+.+.+..+++++ ...+.+.....|+++|+++.. +++|+|+||+|++||+++|+|+||||||||+++|+|+
T Consensus 16 ~~~~~~~~~~~~~----~~~~~~~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl 86 (282)
T cd03291 16 GFGELLEKAKQEN----NDRKHSSDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGE 86 (282)
T ss_pred HHHHHHhcccccc----cccccCCCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 4555555443321 222333445679999999952 3589999999999999999999999999999999999
Q ss_pred CCCCccEEEECCeecCCccHHHHhccEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcc
Q 000406 725 YDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQ 804 (1560)
Q Consensus 725 ~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~ 804 (1560)
++|++|+|.++| +|+|++|++.+++.|++||+.++... ...++.+.++..++.+.+..+|.++++.
T Consensus 87 ~~p~~G~I~i~g-------------~i~yv~q~~~l~~~tv~enl~~~~~~-~~~~~~~~l~~~~l~~~l~~~~~~~~~~ 152 (282)
T cd03291 87 LEPSEGKIKHSG-------------RISFSSQFSWIMPGTIKENIIFGVSY-DEYRYKSVVKACQLEEDITKFPEKDNTV 152 (282)
T ss_pred CCCCCcEEEECC-------------EEEEEeCcccccccCHHHHhhccccc-CHHHHHHHHHHhCCHHHHHhccccccce
Confidence 999999999998 49999999999999999999986432 2234445566667788888999998888
Q ss_pred cCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHH-HHHhcCCcEEEEEecCccccccCCEEEEEe
Q 000406 805 VGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQA-IDKISVGRTTIVIAHRLATVKNANTIVVLD 883 (1560)
Q Consensus 805 ~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~-l~~~~~~~tvi~itH~l~~i~~~D~i~vl~ 883 (1560)
+++.+.+||||||||++|||||+.+|+||||||||++||+.+...+.+. ++.+.++.|+|+|||+++.+..||+|++|+
T Consensus 153 ~~~~~~~LSgGq~qrv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~ 232 (282)
T cd03291 153 LGEGGITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILH 232 (282)
T ss_pred ecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEE
Confidence 9888999999999999999999999999999999999999999988875 455556899999999999988899999999
Q ss_pred CCeEEEecChhhHhhhcchH
Q 000406 884 QGSVVEIGNHRQLLERGGAY 903 (1560)
Q Consensus 884 ~G~iv~~G~~~~l~~~~~~~ 903 (1560)
+|++++.|+++++......|
T Consensus 233 ~G~i~~~g~~~~~~~~~~~~ 252 (282)
T cd03291 233 EGSSYFYGTFSELQSLRPDF 252 (282)
T ss_pred CCEEEEECCHHHHHhcchHH
Confidence 99999999999987543333
No 359
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=8.1e-39 Score=346.97 Aligned_cols=172 Identities=40% Similarity=0.677 Sum_probs=162.2
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++|++++|+.. ..++|+++||+|++||.++|+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 5789999999743 245999999999999999999999999999999999999999999999999999999888999999
Q ss_pred EEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCE
Q 000406 1394 LVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRV 1473 (1560)
Q Consensus 1394 ~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~I 1473 (1560)
|++|++.+|++|++||+ ||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred EEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhhcCEEEEEeCCEE
Q 000406 1474 LLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIREANMIAVVRDGAV 1528 (1560)
Q Consensus 1474 LILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~aDrIlVLd~G~I 1528 (1560)
|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+..||+|++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999999864 47899999999999988999999999975
No 360
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.6e-38 Score=360.52 Aligned_cols=212 Identities=33% Similarity=0.511 Sum_probs=173.6
Q ss_pred EEEEEEEEEcCCCC-CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCH---HHHh
Q 000406 1314 IELKMVTFTYPSRP-EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINV---KWLR 1389 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~-~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l---~~LR 1389 (1560)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996421 1259999999999999999999999999999999999999999999999999988774 5778
Q ss_pred hceEEEcCCC--CCC-CccHHHHHhcCC----CCCCHHHHHHHHHHHhHHHHHHhCCCCcc-ccccCCCCCCChHHHHHH
Q 000406 1390 KQTALVGQEP--ALF-AGTIRDNIALGN----PKASWAEIEEAAEEAYIHKFISSLPQGYE-TQVGESGVQLSGGQKQRI 1461 (1560)
Q Consensus 1390 ~~I~~VpQdp--~LF-~gTIreNL~~g~----~~~sd~eI~~al~~a~l~~~I~~Lp~Gld-t~Vge~G~~LSGGQrQRL 1461 (1560)
++++|+||++ .++ ..|+++|+.++. +...+++...+. .+.+..+ |++ ........+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv 154 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAV-----LLLLVGV--GLPEEVLNRYPHELSGGQRQRV 154 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHH-----HHHHHHC--CCChhHhhCCchhcCHHHHHHH
Confidence 8999999999 344 579999997531 111111111111 1223332 332 334555678999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEec
Q 000406 1462 AIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYG 1532 (1560)
Q Consensus 1462 aLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~G 1532 (1560)
+|||||+.+|+||||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 155 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 155 AIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999998754 7899999999999874 9999999999998865
No 361
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.2e-38 Score=355.22 Aligned_cols=200 Identities=35% Similarity=0.545 Sum_probs=178.7
Q ss_pred EEEEEEEEEcCCCCC--ccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhcc
Q 000406 673 IEFKGVTFAYPSRPE--TVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQ 750 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~--~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~ 750 (1560)
|+++||+++|+.... +++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 578999999974311 3699999999999999999999999999999999999999999999998 5
Q ss_pred EEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCC
Q 000406 751 IGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDP 830 (1560)
Q Consensus 751 i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p 830 (1560)
|+|++|+|.+|+.|++||+.++... ..++..++++..++.+++..+|.|+++.+++.+.+||||||||++|||||+.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPF-DEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCc-CHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999987532 344556667777888899999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHH-HHHHh-cCCcEEEEEecCccccccCCEEEEEeCCe
Q 000406 831 RILLLDEPTSALDSESESIVQQ-AIDKI-SVGRTTIVIAHRLATVKNANTIVVLDQGS 886 (1560)
Q Consensus 831 ~illLDEpts~LD~~~~~~i~~-~l~~~-~~~~tvi~itH~l~~i~~~D~i~vl~~G~ 886 (1560)
+++||||||++||+++.+.+.+ .+++. .+++|+|++||+++.+..||++++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999888877 56655 34799999999999988899999999985
No 362
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-39 Score=383.15 Aligned_cols=218 Identities=27% Similarity=0.423 Sum_probs=185.0
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCC----CHHHHh
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREI----NVKWLR 1389 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i----~l~~LR 1389 (1560)
|++ ||+++|.. . .+ |+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... +....|
T Consensus 2 l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 567 99999953 2 23 99999999999999999999999999999999999999999999998653 244568
Q ss_pred hceEEEcCCCCCCC-ccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHc
Q 000406 1390 KQTALVGQEPALFA-GTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAIL 1468 (1560)
Q Consensus 1390 ~~I~~VpQdp~LF~-gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALL 1468 (1560)
++++||||++.+|+ .|++|||.++......+++.++++..++.++... ...+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDR-----------YPGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhC-----------CcccCCHHHHHHHHHHHHHH
Confidence 89999999999996 5999999986444445566777777666544433 33579999999999999999
Q ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhhccChH
Q 000406 1469 KGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLASHLNGV 1545 (1560)
Q Consensus 1469 r~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~~~~g~ 1545 (1560)
++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++.+.....
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~~~~ 224 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSAMRP 224 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcchhh
Confidence 99999999999999999999999999998754 6899999999998866 99999999999999999999997433333
Q ss_pred HHH
Q 000406 1546 YAS 1548 (1560)
Q Consensus 1546 y~~ 1548 (1560)
++.
T Consensus 225 ~~~ 227 (352)
T PRK11144 225 WLP 227 (352)
T ss_pred hhc
Confidence 343
No 363
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-38 Score=369.72 Aligned_cols=218 Identities=30% Similarity=0.487 Sum_probs=182.8
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC-----CCccEEEECCeecCC--cc
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD-----PTKGLITLDGHDLKS--LQ 743 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~-----~~~G~I~i~g~~i~~--~~ 743 (1560)
..|+++||+++|+. ..+|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 46999999999963 458999999999999999999999999999999999987 689999999999853 45
Q ss_pred HHHHhccEEEEecCCcCccccHHHHHhcCCCCC--C---HHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHH
Q 000406 744 VKWLRTQIGMVGQEPILFATSILENVLMGKENA--T---MKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQ 818 (1560)
Q Consensus 744 ~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~--~---~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQ 818 (1560)
...+|++|+||+|++.+|..|++||+.++.... . .+++.++++..++. .++.......+.+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVW-------DECKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCc-------chhhhhhCCCcccCCHHHHH
Confidence 567788899999999999889999998764311 1 11122222222221 12334456677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeC-----------Ce
Q 000406 819 RIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQ-----------GS 886 (1560)
Q Consensus 819 RialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~-----------G~ 886 (1560)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999988768999999999999865 999999996 67
Q ss_pred EEEecChhhHhh
Q 000406 887 VVEIGNHRQLLE 898 (1560)
Q Consensus 887 iv~~G~~~~l~~ 898 (1560)
+++.|+++++..
T Consensus 242 ~~~~~~~~~~~~ 253 (269)
T PRK14259 242 LVEFNETKKIFN 253 (269)
T ss_pred EEEeCCHHHHHh
Confidence 899999988865
No 364
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.1e-38 Score=375.50 Aligned_cols=215 Identities=22% Similarity=0.420 Sum_probs=182.9
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
++++||+++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|+.++
T Consensus 3 l~~~~l~~~~~~---~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYGT---QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEECC---EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 789999999953 469999999999999999999999999999999999999999999999999977 4467889999
Q ss_pred EEcCCCCCCCc-cHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccC
Q 000406 1394 LVGQEPALFAG-TIRDNIALGNP--KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKG 1470 (1560)
Q Consensus 1394 ~VpQdp~LF~g-TIreNL~~g~~--~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~ 1470 (1560)
|+||++.+|.+ |++|||.+... ..+.++..+. +++.+..+ |++.........||||||||++|||||+.+
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQR-----VEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIHD 151 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 99999999976 99999975321 1122221111 12223332 344444455568999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1471 SRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1471 p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|++|||||||++||+.+.+.+++.|++..+++|+|++||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 152 p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 152 PKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSA 221 (301)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHH
Confidence 9999999999999999999999999998778999999999999876 99999999999999999999876
No 365
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-38 Score=361.08 Aligned_cols=208 Identities=35% Similarity=0.527 Sum_probs=182.0
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++||+++|+. . ..||||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+. .++.++
T Consensus 2 l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVS 74 (232)
T ss_pred eEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEE
Confidence 789999999963 2 249999999999999999999999999999999999999999999999887654 357899
Q ss_pred EEcCCCCCCCc-cHHHHHhcCC-CC-----CCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000406 1394 LVGQEPALFAG-TIRDNIALGN-PK-----ASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARA 1466 (1560)
Q Consensus 1394 ~VpQdp~LF~g-TIreNL~~g~-~~-----~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARA 1466 (1560)
|+||++.+|.+ |++||+.++. +. ..++++.++++..++.+++...| ..||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999985 9999998642 11 12345777788877776665544 3699999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1467 ILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1467 LLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~ 219 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLS 219 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 9999999999999999999999999999998753 7899999999999866 99999999999999999999986
No 366
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-39 Score=367.39 Aligned_cols=219 Identities=31% Similarity=0.484 Sum_probs=181.9
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC-----CccEEEECCeecCCccHHH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP-----TKGLITLDGHDLKSLQVKW 746 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~-----~~G~I~i~g~~i~~~~~~~ 746 (1560)
.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4899999999963 3589999999999999999999999999999999999974 7999999999998777777
Q ss_pred HhccEEEEecCCcCcc-ccHHHHHhcCCCC----CCHHHHHHHHHHhhhHHHHHhCCC--CCCcccCCCCCCCChHHHHH
Q 000406 747 LRTQIGMVGQEPILFA-TSILENVLMGKEN----ATMKEAVAACKAASAHSFISELPL--GYDTQVGDRGTQLSGGQKQR 819 (1560)
Q Consensus 747 lr~~i~~v~Q~~~lf~-~Tv~eNi~~g~~~----~~~~~~~~~~~~~~~~~~i~~l~~--gl~t~~~~~g~~LSgGQrQR 819 (1560)
+|+.|+|++|++.++. .|++||+.++... ...++.. ..+.+.++.+.. .+....+..+.+||||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qr 154 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQ-----ERVRWALEKAQLWDEVKDRLDAPAGKLSGGQQQR 154 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHH-----HHHHHHHHHcCCCcchhhhhcCCcccCCHHHHHH
Confidence 8889999999997664 6999999875321 0111111 111223333311 11233456678999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 820 IALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 820 ialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
++|||||+++|+||||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 155 v~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (250)
T PRK14247 155 LCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVFT 234 (250)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHHc
Confidence 99999999999999999999999999999999999988668999999999999865 99999999999999999988764
No 367
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-38 Score=361.72 Aligned_cols=209 Identities=31% Similarity=0.514 Sum_probs=181.4
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++|++++|+. .+|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 l~~~~l~~~~~~----~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~ 74 (235)
T cd03299 1 LKVENLSKDWKE----FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDIS 74 (235)
T ss_pred CeeEeEEEEeCC----ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEE
Confidence 578999999963 27999999999999999999999999999999999999999999999999987654 368899
Q ss_pred EEcCCCCCCC-ccHHHHHhcCCCC--CC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000406 1394 LVGQEPALFA-GTIRDNIALGNPK--AS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARA 1466 (1560)
Q Consensus 1394 ~VpQdp~LF~-gTIreNL~~g~~~--~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARA 1466 (1560)
|+||++.+|. .|++||+.++... .+ ++++.++++..++.+++... ...||||||||++||||
T Consensus 75 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~lara 143 (235)
T cd03299 75 YVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRK-----------PETLSGGEQQRVAIARA 143 (235)
T ss_pred EEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcC-----------cccCCHHHHHHHHHHHH
Confidence 9999999885 7999999864211 11 23455666666665554433 34799999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1467 ILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1467 LLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
++++|++|||||||++||+.+.+.+.+.|++... ++|+|++||+++.+.. ||+|++|++|++++.|+++++++
T Consensus 144 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 219 (235)
T cd03299 144 LVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFK 219 (235)
T ss_pred HHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHh
Confidence 9999999999999999999999999999998653 7899999999999876 99999999999999999999986
No 368
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.9e-39 Score=358.80 Aligned_cols=205 Identities=25% Similarity=0.434 Sum_probs=170.1
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
++++|+++.|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. ..|+.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 578999999963 359999999999999999999999999999999999999999999999998753 5678999
Q ss_pred EEcCCCCCCCc-cHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccC
Q 000406 1394 LVGQEPALFAG-TIRDNIALGNP--KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKG 1470 (1560)
Q Consensus 1394 ~VpQdp~LF~g-TIreNL~~g~~--~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~ 1470 (1560)
|+||++.+|.+ |++||+.++.. ..+..+.. ..+.+++..+ |++........+||||||||++|||||+.+
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEAR-----RRIDEWLERL--ELSEYANKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHH-----HHHHHHHHHc--CChHHHhCcHhhCCHHHHHHHHHHHHHhcC
Confidence 99999999875 99999976421 11111111 1122333333 333334445568999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEec
Q 000406 1471 SRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYG 1532 (1560)
Q Consensus 1471 p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~G 1532 (1560)
|++|||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999999864 46899999999999866 9999999999998865
No 369
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-38 Score=377.92 Aligned_cols=230 Identities=20% Similarity=0.321 Sum_probs=186.1
Q ss_pred cEEEEEEEEEcCCCC-CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC----CCccEEEECCEecCCCCHHH
Q 000406 1313 GIELKMVTFTYPSRP-EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD----PNQGKVMIEGVDLREINVKW 1387 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~-~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~----p~~G~I~IdGvdi~~i~l~~ 1387 (1560)
-|+++||+++|+.+. ...+|+||||+|++||++||+|+||||||||+++|+|+.+ |++|+|.+||+++..++...
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 379999999996421 2469999999999999999999999999999999999986 58999999999999888766
Q ss_pred Hh----hceEEEcCCCC--CC-CccHHHHHhcCC------C----C--CCHHHHHHHHHHHhHHHHHHhCCCCccccccC
Q 000406 1388 LR----KQTALVGQEPA--LF-AGTIRDNIALGN------P----K--ASWAEIEEAAEEAYIHKFISSLPQGYETQVGE 1448 (1560)
Q Consensus 1388 LR----~~I~~VpQdp~--LF-~gTIreNL~~g~------~----~--~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge 1448 (1560)
++ +.|+||||+|. ++ ..||.+|+.... . . ...+++.++++.+++.+.- .....
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~--------~~~~~ 154 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHK--------DAMRS 154 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChH--------HHHhC
Confidence 53 47999999996 33 358999986310 0 0 0123455666666654211 11223
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeC
Q 000406 1449 SGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRD 1525 (1560)
Q Consensus 1449 ~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~ 1525 (1560)
....||||||||++|||||+.+|+||||||||++||+.+...|.+.|+++.+ +.|+|+|||+++.+.. ||||+||++
T Consensus 155 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 155 FPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred CchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 3457999999999999999999999999999999999999999999998754 6899999999999976 999999999
Q ss_pred CEEEEecCHHHHHhhccChHHHH-HHH
Q 000406 1526 GAVVEYGSHETLLASHLNGVYAS-LVR 1551 (1560)
Q Consensus 1526 G~IvE~Gt~~eLl~~~~~g~y~~-l~~ 1551 (1560)
|+|+|.|++++++++ ....|.+ +..
T Consensus 235 G~ive~g~~~~i~~~-p~~~y~~~ll~ 260 (330)
T PRK15093 235 GQTVETAPSKELVTT-PHHPYTQALIR 260 (330)
T ss_pred CEEEEECCHHHHHhC-CCCHHHHHHHH
Confidence 999999999999873 3445654 444
No 370
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=5.3e-39 Score=358.34 Aligned_cols=199 Identities=31% Similarity=0.524 Sum_probs=168.1
Q ss_pred EEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEEE
Q 000406 674 EFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIGM 753 (1560)
Q Consensus 674 ~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~~ 753 (1560)
+++|++++|++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. ...+++|+|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 368999999641 458999999999999999999999999999999999999999999999998754 345678999
Q ss_pred EecCC--cCccccHHHHHhcCCCCCC--HHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccC
Q 000406 754 VGQEP--ILFATSILENVLMGKENAT--MKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKD 829 (1560)
Q Consensus 754 v~Q~~--~lf~~Tv~eNi~~g~~~~~--~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~ 829 (1560)
++|++ .++..|++||+.++..... .+++.+ .++.+ |+.........+||||||||++|||||+.+
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~---------~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAET---------VLKDL--DLYALKERHPLSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHH---------HHHHc--CCchhcCCCchhCCHHHHHHHHHHHHHHhC
Confidence 99998 4667899999988643221 122222 33333 444445566679999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHh-cCCcEEEEEecCcccccc-CCEEEEEeCCeEE
Q 000406 830 PRILLLDEPTSALDSESESIVQQAIDKI-SVGRTTIVIAHRLATVKN-ANTIVVLDQGSVV 888 (1560)
Q Consensus 830 p~illLDEpts~LD~~~~~~i~~~l~~~-~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv 888 (1560)
|++|||||||++||+.+.+.+.+.|+++ .+|+|+|++||+++.+.. ||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999999887 458999999999999875 9999999999975
No 371
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-38 Score=372.26 Aligned_cols=220 Identities=29% Similarity=0.531 Sum_probs=183.5
Q ss_pred cEEEEEEEEEcCCCC--CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCc----cHH
Q 000406 672 KIEFKGVTFAYPSRP--ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSL----QVK 745 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~--~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~----~~~ 745 (1560)
.|+++|++++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999997321 14599999999999999999999999999999999999999999999999998643 245
Q ss_pred HHhccEEEEecCC--cCccccHHHHHhcCCC--CCCHHHHHHHHHHhhhHHHHHhCCCCCC-cccCCCCCCCChHHHHHH
Q 000406 746 WLRTQIGMVGQEP--ILFATSILENVLMGKE--NATMKEAVAACKAASAHSFISELPLGYD-TQVGDRGTQLSGGQKQRI 820 (1560)
Q Consensus 746 ~lr~~i~~v~Q~~--~lf~~Tv~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~gl~-t~~~~~g~~LSgGQrQRi 820 (1560)
..++.|+|++|+| .+|..|++|||.++.. ....++..+ .+.++++.+ |++ ........+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl 154 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKE-----KALKWLKKV--GLSEDLISKSPFELSGGQMRRV 154 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCChhHhhCCcccCCHHHHHHH
Confidence 5677899999998 5777899999987532 112222211 122344444 564 345677789999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 821 ALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 821 alARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
+|||||+.+|++|||||||++||+.+...+.+.|+++. +|.|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 155 ~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 155 AIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999874 58999999999999865 99999999999999999988764
No 372
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=8e-39 Score=370.78 Aligned_cols=221 Identities=29% Similarity=0.448 Sum_probs=182.7
Q ss_pred cEEEEEEEEEcCCC------CCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHH
Q 000406 672 KIEFKGVTFAYPSR------PETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVK 745 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~------~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~ 745 (1560)
.|+++||++.|+.. .+..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 37899999999631 135699999999999999999999999999999999999999999999999999876543
Q ss_pred ---HHhccEEEEecCCc--Ccc-ccHHHHHhcCCCC---CCHHHHHHHHHHhhhHHHHHhCCCCCC-cccCCCCCCCChH
Q 000406 746 ---WLRTQIGMVGQEPI--LFA-TSILENVLMGKEN---ATMKEAVAACKAASAHSFISELPLGYD-TQVGDRGTQLSGG 815 (1560)
Q Consensus 746 ---~lr~~i~~v~Q~~~--lf~-~Tv~eNi~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~gl~-t~~~~~g~~LSgG 815 (1560)
.+|+.|+||+|++. ++. .|++|||.++... ...++. ...+.+.++.+ |++ ...+..+.+||||
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~~LSgG 154 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQ-----KARIAELLDMV--GLRSEDADKLPRQLSGG 154 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCChhhhhCChhhCCHH
Confidence 35778999999983 444 5999999754211 111111 11223345544 554 3456777899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecC
Q 000406 816 QKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGN 892 (1560)
Q Consensus 816 QrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~ 892 (1560)
||||++|||||+.+|+||||||||++||+.++..+.+.|+++. .|+|+|+|||+++.+.. ||++++|++|++++.|+
T Consensus 155 e~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 234 (265)
T TIGR02769 155 QLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECD 234 (265)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECC
Confidence 9999999999999999999999999999999999999999874 38999999999999975 99999999999999999
Q ss_pred hhhHhhh
Q 000406 893 HRQLLER 899 (1560)
Q Consensus 893 ~~~l~~~ 899 (1560)
++++...
T Consensus 235 ~~~~~~~ 241 (265)
T TIGR02769 235 VAQLLSF 241 (265)
T ss_pred HHHHcCC
Confidence 9998763
No 373
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-38 Score=369.93 Aligned_cols=217 Identities=31% Similarity=0.523 Sum_probs=183.6
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCcc-HHHHhccE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQ-VKWLRTQI 751 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~-~~~lr~~i 751 (1560)
|+++|++++|+. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+ ...+++.|
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 789999999963 245999999999999999999999999999999999999999999999999997764 35677889
Q ss_pred EEEecCCc--CccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhc
Q 000406 752 GMVGQEPI--LFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMI 827 (1560)
Q Consensus 752 ~~v~Q~~~--lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~ 827 (1560)
+||+|+|. ++..|++|||.++... .+..+..+. +.+.++.+ |+....+..+..||||||||++|||||+
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~laral~ 152 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKR-----VDRALAEI--GLEKYRHRSPKTLSGGQGQCVALAGILT 152 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHC--CCHHHhcCCcccCCHHHHHHHHHHHHHH
Confidence 99999985 5567999999876321 122222111 12233443 5555566777899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhh
Q 000406 828 KDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 828 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
.+|+||||||||++||+.++..+.+.|+++. +|+|+|++||+++.+..||+|++|++|++++.|+++++..
T Consensus 153 ~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 224 (274)
T PRK13644 153 MEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLS 224 (274)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 9999999999999999999999999998874 5899999999999997799999999999999999988754
No 374
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-39 Score=364.49 Aligned_cols=218 Identities=26% Similarity=0.394 Sum_probs=181.3
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHH-HHhcc
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVK-WLRTQ 750 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~-~lr~~ 750 (1560)
.|+++|++++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+.. ..++.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 4899999999963 4599999999999999999999999999999999999999999999999999877654 36778
Q ss_pred EEEEecCCcCccc-cHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccC
Q 000406 751 IGMVGQEPILFAT-SILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKD 829 (1560)
Q Consensus 751 i~~v~Q~~~lf~~-Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~ 829 (1560)
++|++|++.+|+. |++||+.++......++..+.+ .+.+..++ ++.......+.+||||||||++|||||+.+
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~-~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERI-----KWVYELFP-RLHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHH-----HHHHHHHH-HHHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 9999999999985 9999998864222222211111 11222221 122223455678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 830 PRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 830 p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
|+||||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999999999998874 58999999999998765 99999999999999999998864
No 375
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.5e-38 Score=363.52 Aligned_cols=216 Identities=32% Similarity=0.573 Sum_probs=183.7
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCc--cHHHHhcc
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSL--QVKWLRTQ 750 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~--~~~~lr~~ 750 (1560)
|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++... +...++++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 789999999963 4589999999999999999999999999999999999999999999999998764 33566788
Q ss_pred EEEEecCCcCcc-ccHHHHHhcCCC---CCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHh
Q 000406 751 IGMVGQEPILFA-TSILENVLMGKE---NATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAM 826 (1560)
Q Consensus 751 i~~v~Q~~~lf~-~Tv~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl 826 (1560)
++|++|++.++. .|++||+.++.. .....+.. ..+.+.++.+ |++...+..+.+||||||||++|||||
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al 151 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAE-----KQARELLAKV--GLAERAHHYPSELSGGQQQRVAIARAL 151 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHH-----HHHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHH
Confidence 999999998886 599999987531 11122111 1223445544 666666777889999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 827 IKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 827 ~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
+.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 225 (240)
T PRK09493 152 AVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIK 225 (240)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhc
Confidence 99999999999999999999999999998874 48999999999999865 99999999999999999888754
No 376
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=365.90 Aligned_cols=217 Identities=30% Similarity=0.441 Sum_probs=182.6
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC--C---CccEEEECCEecCC--CCH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD--P---NQGKVMIEGVDLRE--INV 1385 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~--p---~~G~I~IdGvdi~~--i~l 1385 (1560)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.+||.++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 4899999999963 359999999999999999999999999999999999975 4 58999999999864 344
Q ss_pred HHHhhceEEEcCCCCCCCccHHHHHhcCC--CCC-C----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1386 KWLRKQTALVGQEPALFAGTIRDNIALGN--PKA-S----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~LF~gTIreNL~~g~--~~~-s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
..+|+.++|+||++.+|..|+++|+.++. ... . ++++.++++.+++.+. +.........+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------i~~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDE-------VKDHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccc-------hhhHHhcCcccCCHHHH
Confidence 56788999999999999999999998642 111 1 1233444444444322 22233445568999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||++|||||+++|+||||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++.++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988767899999999999875 999999999999999999998
Q ss_pred Hh
Q 000406 1538 LA 1539 (1560)
Q Consensus 1538 l~ 1539 (1560)
..
T Consensus 235 ~~ 236 (252)
T PRK14255 235 FL 236 (252)
T ss_pred hc
Confidence 86
No 377
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-38 Score=372.24 Aligned_cols=219 Identities=31% Similarity=0.543 Sum_probs=182.9
Q ss_pred EEEEEEEEEcCCCC--CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCc----cHHH
Q 000406 673 IEFKGVTFAYPSRP--ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSL----QVKW 746 (1560)
Q Consensus 673 i~~~~vs~~y~~~~--~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~----~~~~ 746 (1560)
|+++||+++|++.. ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997422 13589999999999999999999999999999999999999999999999998753 3456
Q ss_pred HhccEEEEecCC--cCccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCC-cccCCCCCCCChHHHHHHH
Q 000406 747 LRTQIGMVGQEP--ILFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYD-TQVGDRGTQLSGGQKQRIA 821 (1560)
Q Consensus 747 lr~~i~~v~Q~~--~lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~-t~~~~~g~~LSgGQrQRia 821 (1560)
+|+.|+|++|++ .+|+.|++|||.++... .+.++..+. +.+.++.+ |+. ......+.+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEAL-----AREKLALV--GISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 778899999998 57888999999875321 122222211 12334443 454 2456677899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 822 LARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 822 lARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
|||||+.+|++|||||||++||+.+++.+.+.|+++. +++|||+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 234 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQ 234 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999998874 48999999999999865 99999999999999999988765
No 378
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=8.5e-39 Score=361.65 Aligned_cols=210 Identities=25% Similarity=0.424 Sum_probs=178.9
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
-|+++||++.|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+...+|+.+
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 4999999999963 3599999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEcCCCCCCCccHHHHHhcCC---CCC-CHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHc
Q 000406 1393 ALVGQEPALFAGTIRDNIALGN---PKA-SWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAIL 1468 (1560)
Q Consensus 1393 ~~VpQdp~LF~gTIreNL~~g~---~~~-sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALL 1468 (1560)
+|+||++.+|+.|++||+.++. ... ..+++.++++..++. ++.......+||||||||++|||||+
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~----------~~~~~~~~~~LS~G~~qrv~laral~ 153 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALP----------DTILTKNIAELSGGEKQRISLIRNLQ 153 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCC----------hHHhcCCcccCCHHHHHHHHHHHHHh
Confidence 9999999999999999997631 111 122233333333332 12344556689999999999999999
Q ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhhcCEEEEEe-CCEEEEecCHH
Q 000406 1469 KGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIREANMIAVVR-DGAVVEYGSHE 1535 (1560)
Q Consensus 1469 r~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~aDrIlVLd-~G~IvE~Gt~~ 1535 (1560)
++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|+ ++..+++|+|+
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 154 FMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 99999999999999999999999999998753 789999999999998899999995 66667788885
No 379
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.6e-38 Score=365.46 Aligned_cols=217 Identities=31% Similarity=0.551 Sum_probs=183.0
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCcc--------
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQ-------- 743 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~-------- 743 (1560)
.|+++|++++|++ .++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|+++...+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 3899999999963 35899999999999999999999999999999999999999999999999986432
Q ss_pred HHHHhccEEEEecCCcCcc-ccHHHHHhcCCC---CCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHH
Q 000406 744 VKWLRTQIGMVGQEPILFA-TSILENVLMGKE---NATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQR 819 (1560)
Q Consensus 744 ~~~lr~~i~~v~Q~~~lf~-~Tv~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQR 819 (1560)
...++++++||+|++.+|+ .|++||+.++.. ....++..+ .+.+.++.+ |++...+..+.+||||||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~Gq~qr 152 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATA-----RARELLAKV--GLAGKETSYPRRLSGGQQQR 152 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCcchhhCChhhCChHHHHH
Confidence 2456778999999999886 599999976421 111111111 123344544 55555667788999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHh
Q 000406 820 IALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLL 897 (1560)
Q Consensus 820 ialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~ 897 (1560)
++|||||+.+|+||||||||++||+.+++.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 153 VAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998874 48999999999999876 9999999999999999998876
Q ss_pred h
Q 000406 898 E 898 (1560)
Q Consensus 898 ~ 898 (1560)
+
T Consensus 233 ~ 233 (250)
T PRK11264 233 A 233 (250)
T ss_pred c
Confidence 4
No 380
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=9.4e-39 Score=343.47 Aligned_cols=220 Identities=28% Similarity=0.459 Sum_probs=189.6
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHH-HHhcc
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVK-WLRTQ 750 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~-~lr~~ 750 (1560)
.++++|++..|+. ..+|++|||++++||+++|+|+||+|||||+++|+|+.++.+|+|.++|+|++..++. ..|..
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 4789999999974 5699999999999999999999999999999999999999999999999999999766 46778
Q ss_pred EEEEecCCcCccc-cHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccC
Q 000406 751 IGMVGQEPILFAT-SILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKD 829 (1560)
Q Consensus 751 i~~v~Q~~~lf~~-Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~ 829 (1560)
|+||||.-.+|+. ||+||+.+|......++... ...++..+-+| -+....+..+.+|||||||.+||||||..+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~----~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQE----RDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhccccccccc----ccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 9999999999986 99999998854322211111 11223344455 255566778889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 830 PRILLLDEPTSALDSESESIVQQAIDKISV--GRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 830 p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
|++|+|||||.+|-|.-.+.|.+.|+++.+ +.||++|-++...+.. +||.+||++|+|+.+|+.++|...
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999999863 6799999999999865 999999999999999999999865
No 381
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=8.6e-39 Score=360.92 Aligned_cols=209 Identities=29% Similarity=0.535 Sum_probs=174.6
Q ss_pred EEEEEEEEEcCCCC-CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHH---Hh
Q 000406 673 IEFKGVTFAYPSRP-ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKW---LR 748 (1560)
Q Consensus 673 i~~~~vs~~y~~~~-~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~---lr 748 (1560)
|+++||+++|++.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996421 246999999999999999999999999999999999999999999999999998766543 33
Q ss_pred -ccEEEEecCCcCcc-ccHHHHHhcCCC--CCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHH
Q 000406 749 -TQIGMVGQEPILFA-TSILENVLMGKE--NATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALAR 824 (1560)
Q Consensus 749 -~~i~~v~Q~~~lf~-~Tv~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialAR 824 (1560)
++|+||+|++.+|+ .|++||+.++.. .....+..+ .+.++++.+ |++......+.+||||||||++|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKE-----RAYEMLEKV--GLEHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 67999999999886 499999987421 111111111 122344444 5666667777899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCccccccCCEEEEEeCCeEE
Q 000406 825 AMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKNANTIVVLDQGSVV 888 (1560)
Q Consensus 825 Al~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~~D~i~vl~~G~iv 888 (1560)
||+.+|+||||||||++||+.++..+.+.|+++. .++|+|+|||+++.+..||+|++|++|+++
T Consensus 155 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 155 ALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 9999999999999999999999999999998874 379999999999998889999999999985
No 382
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.4e-38 Score=364.25 Aligned_cols=221 Identities=24% Similarity=0.447 Sum_probs=185.9
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHH-HhccE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKW-LRTQI 751 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~-lr~~i 751 (1560)
|+++|+++.|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+... .+..+
T Consensus 3 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 789999999963 35899999999999999999999999999999999999999999999999988776553 45679
Q ss_pred EEEecCCcCccc-cHHHHHhcCCCCCC-H-HH---HHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHH
Q 000406 752 GMVGQEPILFAT-SILENVLMGKENAT-M-KE---AVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARA 825 (1560)
Q Consensus 752 ~~v~Q~~~lf~~-Tv~eNi~~g~~~~~-~-~~---~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARA 825 (1560)
+|++|++.+|++ |++||+.++..... . .. .........+.+.++.+ |++........+||||||||++||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lara 157 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGML 157 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 999999999986 99999988532100 0 00 00001112234455554 56666677788999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 826 MIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 826 l~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
|+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 158 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 158 LMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 99999999999999999999999999999988668999999999999976 99999999999999999888753
No 383
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=369.36 Aligned_cols=219 Identities=26% Similarity=0.522 Sum_probs=185.0
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|++. +.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|++|
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 58999999999632 34689999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEecCCc--CccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhc
Q 000406 752 GMVGQEPI--LFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMI 827 (1560)
Q Consensus 752 ~~v~Q~~~--lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~ 827 (1560)
+||+|+|. ++..|++|||.++... .+.++... .+.+.++.+ |++...+..+.+||||||||++|||||+
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKD-----IIDDLAKKV--GMEDYLDKEPQNLSGGQKQRVAIASVLA 158 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999983 4456999999875321 12222211 122334443 5555566777899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-C-CcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhh
Q 000406 828 KDPRILLLDEPTSALDSESESIVQQAIDKIS-V-GRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 828 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~-~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
.+|++|||||||++||+.+.+.+.+.|+++. + ++|+|++||+++.+..||+|++|++|++++.|+++++.+
T Consensus 159 ~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 231 (271)
T PRK13632 159 LNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILN 231 (271)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999999999999999999874 3 589999999999987899999999999999999888764
No 384
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.6e-39 Score=367.99 Aligned_cols=219 Identities=28% Similarity=0.477 Sum_probs=180.8
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC-----CccEEEECCeecC--CccH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP-----TKGLITLDGHDLK--SLQV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~-----~~G~I~i~g~~i~--~~~~ 744 (1560)
.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++. +.+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999964 3589999999999999999999999999999999999987 4999999999986 4455
Q ss_pred HHHhccEEEEecCCcCccc-cHHHHHhcCCC--C--CCHHHHHHHHHHhhhHHHHHhCC--CCCCcccCCCCCCCChHHH
Q 000406 745 KWLRTQIGMVGQEPILFAT-SILENVLMGKE--N--ATMKEAVAACKAASAHSFISELP--LGYDTQVGDRGTQLSGGQK 817 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~lf~~-Tv~eNi~~g~~--~--~~~~~~~~~~~~~~~~~~i~~l~--~gl~t~~~~~g~~LSgGQr 817 (1560)
..+|++++|++|++.+|+. |+.||+.++.. . ...++..+. +.+.++.+. ..+....+..+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~ 155 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDER-----VEWALKKAALWDEVKDRLNDYPSNLSGGQR 155 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHH-----HHHHHHHcCCccchhhhhccChhhCCHHHH
Confidence 5677899999999999976 99999987531 1 011111111 111222221 0112334667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 818 QRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 818 QRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (253)
T PRK14267 156 QRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKV 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988667999999999999865 999999999999999999887
Q ss_pred hh
Q 000406 897 LE 898 (1560)
Q Consensus 897 ~~ 898 (1560)
.+
T Consensus 236 ~~ 237 (253)
T PRK14267 236 FE 237 (253)
T ss_pred Hh
Confidence 64
No 385
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-38 Score=369.60 Aligned_cols=219 Identities=26% Similarity=0.505 Sum_probs=183.9
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|+.. ..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++++
T Consensus 3 ~l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 3 LIETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred eEEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 37899999999632 3589999999999999999999999999999999999999999999999999876667778899
Q ss_pred EEEecCC--cCccccHHHHHhcCCC--CCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhc
Q 000406 752 GMVGQEP--ILFATSILENVLMGKE--NATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMI 827 (1560)
Q Consensus 752 ~~v~Q~~--~lf~~Tv~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~ 827 (1560)
+||+|++ .+++.||.||+.++.. ..+.++..+ ...+.++.+ |+.......+..||||||||++|||||+
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrl~laraL~ 153 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAH-----RVSSALHML--GLEELRDRVPHHLSGGEKKRVAIAGVIA 153 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHHHHHH
Confidence 9999998 3677899999987532 112221111 112233333 4444456667799999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCccccc-cCCEEEEEeCCeEEEecChhhHhhh
Q 000406 828 KDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVK-NANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 828 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~-~~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
.+|++|||||||++||+.+.+.+.+.++++. .++|+|++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 154 ~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 154 MEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 9999999999999999999999999998874 3899999999999986 4999999999999999999998753
No 386
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=9.8e-39 Score=376.65 Aligned_cols=216 Identities=29% Similarity=0.494 Sum_probs=181.4
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ....|++|
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 5899999999963 4599999999999999999999999999999999999999999999999998653 34567889
Q ss_pred EEEecCCcCcc-ccHHHHHhcCCC--CCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhcc
Q 000406 752 GMVGQEPILFA-TSILENVLMGKE--NATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIK 828 (1560)
Q Consensus 752 ~~v~Q~~~lf~-~Tv~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~ 828 (1560)
+||||++.++. .|++||+.+... .....+..+.+ .+.++.+ |+.........+||||||||++|||||+.
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~ll~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~ 152 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVI-----PSLLEFA--RLESKADVRVALLSGGMKRRLTLARALIN 152 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHC--CChhHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 99999999886 599999975321 11222222211 1223332 44444566677999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 829 DPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 829 ~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
+|++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 153 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 224 (303)
T TIGR01288 153 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALID 224 (303)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999999873 58999999999999976 99999999999999999998864
No 387
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.7e-39 Score=358.27 Aligned_cols=207 Identities=26% Similarity=0.454 Sum_probs=172.8
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++|+++.|++ .++|+|+||+|++| +++|+||||||||||+++|+|+++|++|+|.++|.++...+ ..+++.++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 578999999963 35999999999999 99999999999999999999999999999999999987766 56788999
Q ss_pred EEecCCcCccc-cHHHHHhcCCC--CCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccC
Q 000406 753 MVGQEPILFAT-SILENVLMGKE--NATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKD 829 (1560)
Q Consensus 753 ~v~Q~~~lf~~-Tv~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~ 829 (1560)
|++|++.+|.. |++||+.+... ....++..+ .+.+.++.+ |++........+||||||||++|||||+++
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 148 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKA-----RVDEVLELV--NLGDRAKKKIGSLSGGMRRRVGIAQALVGD 148 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHH-----HHHHHHHHC--CCHHHHhCchhhCCHHHHHHHHHHHHHhcC
Confidence 99999999886 99999986421 111111111 111223332 333334455678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEec
Q 000406 830 PRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIG 891 (1560)
Q Consensus 830 p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G 891 (1560)
|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 149 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 149 PSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999988667999999999999865 9999999999998764
No 388
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=7.4e-39 Score=371.70 Aligned_cols=218 Identities=25% Similarity=0.439 Sum_probs=183.2
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHH---HHh
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVK---WLR 748 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~---~lr 748 (1560)
.|+++||+++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+.. .++
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 5899999999963 4589999999999999999999999999999999999999999999999998766543 356
Q ss_pred ccEEEEecCCcCccc-cHHHHHhcCCCC---CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHH
Q 000406 749 TQIGMVGQEPILFAT-SILENVLMGKEN---ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALAR 824 (1560)
Q Consensus 749 ~~i~~v~Q~~~lf~~-Tv~eNi~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialAR 824 (1560)
++|+|++|++.+|+. |+.||+.++... ...++.. ..+.+.++.+ |+.........+||||||||++|||
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgGq~qrv~lar 156 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLH-----STVMMKLEAV--GLRGAAKLMPSELSGGMARRAALAR 156 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 789999999999986 999999864211 1111111 1112233443 5555556677899999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 825 AMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 825 Al~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
||+.+|++|||||||++||+.+.+.+.+.|+++. .|+|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 157 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (269)
T PRK11831 157 AIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQAN 234 (269)
T ss_pred HHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999874 37999999999999876 999999999999999999988753
No 389
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=8.7e-39 Score=358.84 Aligned_cols=201 Identities=36% Similarity=0.526 Sum_probs=169.7
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCC--CCHHHHhhc
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLRE--INVKWLRKQ 1391 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~--i~l~~LR~~ 1391 (1560)
|+++||+++|+. .++|+++||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.. .+...+|+.
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 578999999964 359999999999999999999999999999999999999999999999999853 345677899
Q ss_pred eEEEcCCCCCCC-ccHHHHHhcCCC---CCCHH----HHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHH
Q 000406 1392 TALVGQEPALFA-GTIRDNIALGNP---KASWA----EIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAI 1463 (1560)
Q Consensus 1392 I~~VpQdp~LF~-gTIreNL~~g~~---~~sd~----eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaL 1463 (1560)
++|+||++.+|. .|++||+.++.. ..+.+ ++.++++..+ ++..+.....+||||||||++|
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrv~l 146 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVG-----------LADKADAYPAQLSGGQQQRVAI 146 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcC-----------CHhHhhhCccccCHHHHHHHHH
Confidence 999999999886 699999986421 12222 2333333333 3333444456899999999999
Q ss_pred HHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEE
Q 000406 1464 ARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAV 1528 (1560)
Q Consensus 1464 ARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~I 1528 (1560)
||||+++|+||||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|+|
T Consensus 147 a~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 147 ARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999875 46899999999999976 999999999975
No 390
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.9e-38 Score=377.31 Aligned_cols=216 Identities=26% Similarity=0.439 Sum_probs=181.9
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.|+++||+++|+. ..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...|+.|
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 4999999999963 35999999999999999999999999999999999999999999999999997654 5678899
Q ss_pred EEEcCCCCCC-CccHHHHHhcCCC--CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHcc
Q 000406 1393 ALVGQEPALF-AGTIRDNIALGNP--KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILK 1469 (1560)
Q Consensus 1393 ~~VpQdp~LF-~gTIreNL~~g~~--~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr 1469 (1560)
+|+||++.++ ..|++||+.+... ..+..+..+.++. +-+. ..+++..++.++ +||||||||++|||||+.
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~--ll~~-~~L~~~~~~~~~----~LS~G~kqrv~lA~aL~~ 189 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPS--LLEF-ARLESKADARVS----DLSGGMKRRLTLARALIN 189 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHH--HHHH-cCCchhhCCChh----hCCHHHHHHHHHHHHHhc
Confidence 9999999886 5699999985321 1222322222211 1111 134444555554 799999999999999999
Q ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1470 GSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1470 ~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
+|++|||||||++||+.+...+++.|+++. +++|||++||+++.+.. ||+|++|++|+|++.|+++++.+
T Consensus 190 ~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 261 (340)
T PRK13536 190 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALID 261 (340)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999999874 47899999999999976 99999999999999999999976
No 391
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-38 Score=366.21 Aligned_cols=218 Identities=29% Similarity=0.481 Sum_probs=183.1
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECC------EecCCCCHH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEG------VDLREINVK 1386 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdG------vdi~~i~l~ 1386 (1560)
.|+++|++++|+. +++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++| .++..++..
T Consensus 10 ~i~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 10 VFNISRLYLYIND---KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred heeeeeEEEecCC---ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 4999999999963 3599999999999999999999999999999999999999986666654 677777777
Q ss_pred HHhhceEEEcCCCCCCCc-cHHHHHhcCCC--CC-CHHH----HHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHH
Q 000406 1387 WLRKQTALVGQEPALFAG-TIRDNIALGNP--KA-SWAE----IEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQK 1458 (1560)
Q Consensus 1387 ~LR~~I~~VpQdp~LF~g-TIreNL~~g~~--~~-sd~e----I~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQr 1458 (1560)
.+|+.++|+||++.+|.+ |+++||.++.. .. ..++ +.++++..++.+++ +......+..||+|||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~LS~G~~ 159 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEV-------YDRLNSPASQLSGGQQ 159 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccc-------hhhhcCCcccCCHHHH
Confidence 889999999999999975 99999986521 11 2223 33444444443222 1123445668999999
Q ss_pred HHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHh-hcCEEEEEeCCEEEEecCHHHH
Q 000406 1459 QRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIR-EANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1459 QRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~-~aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
||++||||++++|+||||||||++||..+++.+.+.|++..+++|+|+|||+++.+. .||++++|++|++++.|+++++
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~ 239 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEI 239 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999999999999998877799999999999995 5999999999999999999999
Q ss_pred Hhh
Q 000406 1538 LAS 1540 (1560)
Q Consensus 1538 l~~ 1540 (1560)
.++
T Consensus 240 ~~~ 242 (257)
T PRK14246 240 FTS 242 (257)
T ss_pred HhC
Confidence 873
No 392
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-38 Score=364.96 Aligned_cols=218 Identities=33% Similarity=0.528 Sum_probs=181.2
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC-----CccEEEECCeecCC--cc
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP-----TKGLITLDGHDLKS--LQ 743 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~-----~~G~I~i~g~~i~~--~~ 743 (1560)
|.|+++||++.|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46899999999973 3589999999999999999999999999999999999763 69999999999864 34
Q ss_pred HHHHhccEEEEecCCcCccccHHHHHhcCCCCC---CHH----HHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHH
Q 000406 744 VKWLRTQIGMVGQEPILFATSILENVLMGKENA---TMK----EAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQ 816 (1560)
Q Consensus 744 ~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~---~~~----~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQ 816 (1560)
...+|+.|+||+|++.+|+.|++||+.++.... ..+ ++.++++..++.+ ++....+..+.+|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWD-------EVKDRLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCch-------hhHHHHhcCCCCCCHHH
Confidence 456788999999999999899999998753211 111 1222222222211 22234456678999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhh
Q 000406 817 KQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQ 895 (1560)
Q Consensus 817 rQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~ 895 (1560)
|||++|||||+.+|++|||||||++||+.++..+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988668999999999998866 99999999999999999888
Q ss_pred Hhh
Q 000406 896 LLE 898 (1560)
Q Consensus 896 l~~ 898 (1560)
+..
T Consensus 232 ~~~ 234 (250)
T PRK14240 232 LFT 234 (250)
T ss_pred HHh
Confidence 754
No 393
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.5e-38 Score=364.46 Aligned_cols=228 Identities=26% Similarity=0.378 Sum_probs=185.3
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCC----CccEEEECCEecCCCCHHHH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDP----NQGKVMIEGVDLREINVKWL 1388 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p----~~G~I~IdGvdi~~i~l~~L 1388 (1560)
.|+++||+++| + .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~-~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~ 77 (254)
T PRK10418 4 QIELRNIALQA-A---QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALR 77 (254)
T ss_pred EEEEeCeEEEe-c---cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--ccc
Confidence 58999999999 2 2599999999999999999999999999999999999999 999999999998632 223
Q ss_pred hhceEEEcCCCC-CCC--ccHHHHHhcC----CCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000406 1389 RKQTALVGQEPA-LFA--GTIRDNIALG----NPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRI 1461 (1560)
Q Consensus 1389 R~~I~~VpQdp~-LF~--gTIreNL~~g----~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRL 1461 (1560)
++.++||||++. .|. .|+.+|+... .....+++++++++.+++.+. ++.++.....||||||||+
T Consensus 78 ~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv 149 (254)
T PRK10418 78 GRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRM 149 (254)
T ss_pred cceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHH
Confidence 467999999985 343 5888886431 112233456666666555321 1234455668999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHH
Q 000406 1462 AIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLL 1538 (1560)
Q Consensus 1462 aLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl 1538 (1560)
+|||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999998753 6899999999999865 9999999999999999999998
Q ss_pred hhccChHHHHHHHHhh
Q 000406 1539 ASHLNGVYASLVRAET 1554 (1560)
Q Consensus 1539 ~~~~~g~y~~l~~~q~ 1554 (1560)
++.....+..++..+.
T Consensus 230 ~~~~~~~~~~~~~~~~ 245 (254)
T PRK10418 230 NAPKHAVTRSLVSAHL 245 (254)
T ss_pred hCCCCHHHHHHHHhhh
Confidence 7433334555665543
No 394
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=367.17 Aligned_cols=219 Identities=28% Similarity=0.481 Sum_probs=181.2
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC--C---CccEEEECCeecCC--ccH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD--P---TKGLITLDGHDLKS--LQV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~--~---~~G~I~i~g~~i~~--~~~ 744 (1560)
.|+++|+++.|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|+++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 5899999999963 358999999999999999999999999999999999987 3 69999999999863 344
Q ss_pred HHHhccEEEEecCCcCccccHHHHHhcCCCCC---CHHHHHHHHHHhhhHHHHHhCCC--CCCcccCCCCCCCChHHHHH
Q 000406 745 KWLRTQIGMVGQEPILFATSILENVLMGKENA---TMKEAVAACKAASAHSFISELPL--GYDTQVGDRGTQLSGGQKQR 819 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~---~~~~~~~~~~~~~~~~~i~~l~~--gl~t~~~~~g~~LSgGQrQR 819 (1560)
..+|+.|+|++|++.+|+.|++||+.++.... ..++..+. +.+.++.+.. .+...++..+.+||||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qr 163 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEI-----VEKSLKDVALWDEVKDRLHTQALSLSGGQQQR 163 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHH-----HHHHHHHcCCchhhhhhhhCCcccCCHHHHHH
Confidence 56778899999999999899999998753211 11211111 1122222211 11234466778999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 820 IALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 820 ialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
++|||||+.+|+||||||||++||+.++..+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 164 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 243 (259)
T PRK14274 164 LCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMFS 243 (259)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHhh
Confidence 99999999999999999999999999999999999998778999999999999865 99999999999999999998864
No 395
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-38 Score=364.55 Aligned_cols=217 Identities=24% Similarity=0.452 Sum_probs=184.8
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHH-Hhcc
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKW-LRTQ 750 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~-lr~~ 750 (1560)
.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+... .|++
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 4889999999963 46999999999999999999999999999999999999999999999999998766543 5678
Q ss_pred EEEEecCCcCccc-cHHHHHhcCCCC---CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHh
Q 000406 751 IGMVGQEPILFAT-SILENVLMGKEN---ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAM 826 (1560)
Q Consensus 751 i~~v~Q~~~lf~~-Tv~eNi~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl 826 (1560)
++|++|++.++.. |++||+.++... ...++. ...+.+.++.+ |++........+||||||||++|||||
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQR-----EDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHH-----HHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 9999999998875 999999875321 111111 12233455555 565666777889999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 827 IKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 827 ~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
+.+|++|||||||++||+.+...+.+.++++. +|+|+|++||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 99999999999999999999999999998774 48999999999988765 99999999999999999988764
No 396
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=5.4e-38 Score=362.64 Aligned_cols=225 Identities=24% Similarity=0.397 Sum_probs=183.8
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEe-----cCCCCHHH
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVD-----LREINVKW 1387 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvd-----i~~i~l~~ 1387 (1560)
-|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.+ +...+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999963 359999999999999999999999999999999999999999999999998 87776554
Q ss_pred ----HhhceEEEcCCCC--CC-CccHHHHHhcCC---CCCCHHHHHHHHHHHhHHHHHHhCCCCcc-ccccCCCCCCChH
Q 000406 1388 ----LRKQTALVGQEPA--LF-AGTIRDNIALGN---PKASWAEIEEAAEEAYIHKFISSLPQGYE-TQVGESGVQLSGG 1456 (1560)
Q Consensus 1388 ----LR~~I~~VpQdp~--LF-~gTIreNL~~g~---~~~sd~eI~~al~~a~l~~~I~~Lp~Gld-t~Vge~G~~LSGG 1456 (1560)
+|+.++||||++. ++ ..|+.+|+.+.. ......++.+ .+.+++..+ |++ +.+...+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERV--EIDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHc--CCChhHHhCCCccCCHH
Confidence 3567999999984 33 358888885421 1111122211 234555555 333 3456677889999
Q ss_pred HHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecC
Q 000406 1457 QKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGS 1533 (1560)
Q Consensus 1457 QrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt 1533 (1560)
||||++|||||+++|+||||||||++||+.+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998653 7899999999999975 99999999999999999
Q ss_pred HHHHHhhccChHHHH
Q 000406 1534 HETLLASHLNGVYAS 1548 (1560)
Q Consensus 1534 ~~eLl~~~~~g~y~~ 1548 (1560)
++++..+ ....|.+
T Consensus 236 ~~~~~~~-~~~~~~~ 249 (258)
T PRK11701 236 TDQVLDD-PQHPYTQ 249 (258)
T ss_pred HHHHhcC-CCCHHHH
Confidence 9999863 2333543
No 397
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.3e-38 Score=378.88 Aligned_cols=216 Identities=28% Similarity=0.490 Sum_probs=182.2
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|++ ..+|+||||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++|
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 5999999999963 45999999999999999999999999999999999999999999999999987654 4567889
Q ss_pred EEEecCCcCcc-ccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhcc
Q 000406 752 GMVGQEPILFA-TSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIK 828 (1560)
Q Consensus 752 ~~v~Q~~~lf~-~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~ 828 (1560)
|||||++.++. .|++||+.+.... ....+..+.+ .++++.+ |+.........+||||||||++|||||+.
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~ll~~~--~L~~~~~~~~~~LS~G~kqrv~lA~aL~~ 189 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVI-----PSLLEFA--RLESKADARVSDLSGGMKRRLTLARALIN 189 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCchhhCCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999875 5999999753211 1222221111 1223322 44444556667899999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 829 DPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 829 ~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
+|++|||||||++||+.++..+.+.|+++. +|+|||++||+++.+.. ||+|++|++|+++..|+++++..
T Consensus 190 ~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~ 261 (340)
T PRK13536 190 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALID 261 (340)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999999874 48999999999999976 99999999999999999999865
No 398
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7e-39 Score=371.72 Aligned_cols=215 Identities=31% Similarity=0.471 Sum_probs=177.9
Q ss_pred EEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHH----hc
Q 000406 674 EFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWL----RT 749 (1560)
Q Consensus 674 ~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~l----r~ 749 (1560)
.++|++++|+. ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+ ++
T Consensus 26 ~~~~~~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTGQ---TVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcCC---ceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 46678888853 458999999999999999999999999999999999999999999999999887655432 45
Q ss_pred cEEEEecCCcCcc-ccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHh
Q 000406 750 QIGMVGQEPILFA-TSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAM 826 (1560)
Q Consensus 750 ~i~~v~Q~~~lf~-~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl 826 (1560)
+++|++|++.+|. .|++||+.++... ....+.. ..+.+.++.+ |+...+.....+||||||||++|||||
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrv~lAral 175 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAERE-----ERAAEALELV--GLEGWEHKYPDELSGGMQQRVGLARAL 175 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhCCcccCCHHHHHHHHHHHHH
Confidence 7999999999886 5999999875311 1111111 1122334443 454455666679999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 827 IKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 827 ~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
+.+|+||||||||++||+.+++.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 176 ~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 250 (269)
T cd03294 176 AVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILT 250 (269)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999998873 38999999999999865 99999999999999999998865
No 399
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-38 Score=366.06 Aligned_cols=212 Identities=29% Similarity=0.453 Sum_probs=182.8
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCC--------ccEEEECCEecCCCCH
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPN--------QGKVMIEGVDLREINV 1385 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~--------~G~I~IdGvdi~~i~l 1385 (1560)
|+++|++++|.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.++...+.
T Consensus 2 l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 789999999953 35999999999999999999999999999999999999998 9999999999988888
Q ss_pred HHHhhceEEEcCCCC-CCCccHHHHHhcCC-CCC------C---HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCC
Q 000406 1386 KWLRKQTALVGQEPA-LFAGTIRDNIALGN-PKA------S---WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLS 1454 (1560)
Q Consensus 1386 ~~LR~~I~~VpQdp~-LF~gTIreNL~~g~-~~~------s---d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LS 1454 (1560)
..+++.++|+||++. +|..|++||+.++. +.. + .+.++++++.. |+++.++.....||
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS 147 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALA-----------GATALVGRDVTTLS 147 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHc-----------CcHhhhcCCcccCC
Confidence 888889999999986 67889999998752 110 1 12233444443 34444555667899
Q ss_pred hHHHHHHHHHHHHc---------cCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEE
Q 000406 1455 GGQKQRIAIARAIL---------KGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAV 1522 (1560)
Q Consensus 1455 GGQrQRLaLARALL---------r~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlV 1522 (1560)
||||||++|||||+ .+|++|||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++
T Consensus 148 gG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~ 227 (272)
T PRK13547 148 GGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAM 227 (272)
T ss_pred HHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEE
Confidence 99999999999999 59999999999999999999999999998753 6899999999999964 999999
Q ss_pred EeCCEEEEecCHHHHHh
Q 000406 1523 VRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1523 Ld~G~IvE~Gt~~eLl~ 1539 (1560)
|++|+|++.|++++++.
T Consensus 228 l~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 228 LADGAIVAHGAPADVLT 244 (272)
T ss_pred EECCeEEEecCHHHHcC
Confidence 99999999999999875
No 400
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=7.9e-39 Score=357.80 Aligned_cols=203 Identities=24% Similarity=0.420 Sum_probs=172.5
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++|++++|++ .++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++... ..+++.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 578999999963 4699999999999999999999999999999999999999999999999988654 45677899
Q ss_pred EEecCCcCcc-ccHHHHHhcCCC--CCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccC
Q 000406 753 MVGQEPILFA-TSILENVLMGKE--NATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKD 829 (1560)
Q Consensus 753 ~v~Q~~~lf~-~Tv~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~ 829 (1560)
||+|++.++. .|++||+.++.. ....+++.++++.. |++......+.+||||||||++||||++.+
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVV-----------GLKDSAKKKVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHc-----------CCHHHHhhhHhhCCHHHHHHHHHHHHHhcC
Confidence 9999998885 599999987532 11223333333333 343444556678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEec
Q 000406 830 PRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIG 891 (1560)
Q Consensus 830 p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G 891 (1560)
|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999998874 58999999999999875 9999999999998765
No 401
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-39 Score=337.44 Aligned_cols=219 Identities=29% Similarity=0.439 Sum_probs=186.4
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|++.+++++|++ ...+++||||+++.||+++|.|+|||||||+|++|..++.|++|+|++||.|.... +...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~-p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRD-PSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccC-hHHHhhhcc
Confidence 688999999975 34589999999999999999999999999999999999999999999999998764 456788999
Q ss_pred EEecCCcCccc-cHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCCC
Q 000406 753 MVGQEPILFAT-SILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPR 831 (1560)
Q Consensus 753 ~v~Q~~~lf~~-Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~ 831 (1560)
+++-+.-|+.. |++|||.|...-.......-.++.+ +..+.+ +++..++++..+||-|+||||+|||||+++|+
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~---~l~k~l--~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~ 153 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKARIA---ELSKRL--QLLEYLDRRVGEFSTGMKQKVAIARALVHDPS 153 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHH---HHHHHh--ChHHHHHHHHhhhchhhHHHHHHHHHHhcCCC
Confidence 99988888875 9999999864321211111122222 333443 55566677778999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhcC-CcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 832 ILLLDEPTSALDSESESIVQQAIDKISV-GRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 832 illLDEpts~LD~~~~~~i~~~l~~~~~-~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
|+|||||||+||..+.+.+.+.|.++.. |++||+.||.++.++. ||+|++|.+|+++..|+++++.++
T Consensus 154 i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 154 ILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred eEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 9999999999999999999999999865 9999999999999985 999999999999999999998764
No 402
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-39 Score=360.72 Aligned_cols=209 Identities=33% Similarity=0.487 Sum_probs=173.8
Q ss_pred EEEEEEEEEcCCCC-CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 673 IEFKGVTFAYPSRP-ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 673 i~~~~vs~~y~~~~-~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
|+++|++++|+... ..++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. .++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999997411 1469999999999999999999999999999999999999999999999998763 35689
Q ss_pred EEEecCCcCcc-ccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhcc
Q 000406 752 GMVGQEPILFA-TSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIK 828 (1560)
Q Consensus 752 ~~v~Q~~~lf~-~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~ 828 (1560)
+||+|++.+|. .|++||+.++... ...++.. ..+.+.++.+ |++........+||||||||++|||||+.
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~ 148 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEAR-----ERAEELLELV--GLSGFENAYPHQLSGGMRQRVALARALAV 148 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 99999999987 5999999875321 1111111 1223344444 55555666678999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEe--CCeEEEecCh
Q 000406 829 DPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLD--QGSVVEIGNH 893 (1560)
Q Consensus 829 ~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~--~G~iv~~G~~ 893 (1560)
+|++|||||||++||+.++..+.+.|+++. .++|+|+|||+++.+.. ||+|++|+ +|++++.++.
T Consensus 149 ~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 149 DPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999999999999999999998873 48999999999998865 99999999 7999998764
No 403
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2.8e-38 Score=354.56 Aligned_cols=202 Identities=35% Similarity=0.558 Sum_probs=175.5
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
++++||+++|+. +++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+ .+|+.++
T Consensus 1 ~~~~~l~~~~~~-----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYEH-----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVS 73 (213)
T ss_pred CeEEeeeEEeCC-----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceE
Confidence 478999999952 468999999999999999999999999999999999999999999999987654 4678899
Q ss_pred EEcCCCCCCCc-cHHHHHhcCC-CC-----CCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000406 1394 LVGQEPALFAG-TIRDNIALGN-PK-----ASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARA 1466 (1560)
Q Consensus 1394 ~VpQdp~LF~g-TIreNL~~g~-~~-----~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARA 1466 (1560)
|+||+|.+|.+ |++||+.++. +. ..++++.++++..++.+.....| .+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~lara 142 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARC 142 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHH
Confidence 99999999875 9999997531 11 12345667777777766655544 3799999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecC
Q 000406 1467 ILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGS 1533 (1560)
Q Consensus 1467 LLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt 1533 (1560)
++++|+||||||||++||+++...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|.
T Consensus 143 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 143 LVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999999999999998753 6899999999999875 99999999999999874
No 404
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-38 Score=367.77 Aligned_cols=220 Identities=30% Similarity=0.445 Sum_probs=183.7
Q ss_pred CcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC-----CCccEEEECCeecCC--
Q 000406 669 VSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD-----PTKGLITLDGHDLKS-- 741 (1560)
Q Consensus 669 ~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~-----~~~G~I~i~g~~i~~-- 741 (1560)
....|+++|++++|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++..
T Consensus 17 ~~~~l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~ 93 (267)
T PRK14237 17 EEIALSTKDLHVYYGK---KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKE 93 (267)
T ss_pred CCeEEEEeeEEEEECC---eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEccccc
Confidence 3446999999999963 469999999999999999999999999999999999996 589999999999864
Q ss_pred ccHHHHhccEEEEecCCcCccccHHHHHhcCCCCC---CHH----HHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCCh
Q 000406 742 LQVKWLRTQIGMVGQEPILFATSILENVLMGKENA---TMK----EAVAACKAASAHSFISELPLGYDTQVGDRGTQLSG 814 (1560)
Q Consensus 742 ~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~---~~~----~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSg 814 (1560)
.+...+++.|+||+|++.+|+.|++|||.++.... ..+ ++.++++..++.+ +++...+..+.+|||
T Consensus 94 ~~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~i~~~~~~~~~~LS~ 166 (267)
T PRK14237 94 INVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWD-------QVKDDLHKSALTLSG 166 (267)
T ss_pred CChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCc-------hhhhhhcCCcccCCH
Confidence 34556788999999999999899999998753211 111 1122222222211 122445677889999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecCh
Q 000406 815 GQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNH 893 (1560)
Q Consensus 815 GQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~ 893 (1560)
|||||++|||||+++|++|||||||++||+.+...+.+.|+++.++.|+|+|||+++.+.. ||+|++|++|++++.|++
T Consensus 167 G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~ 246 (267)
T PRK14237 167 GQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKT 246 (267)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999988778999999999999865 999999999999999999
Q ss_pred hhHhh
Q 000406 894 RQLLE 898 (1560)
Q Consensus 894 ~~l~~ 898 (1560)
+++..
T Consensus 247 ~~~~~ 251 (267)
T PRK14237 247 RNIFT 251 (267)
T ss_pred HHHhc
Confidence 88865
No 405
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-38 Score=367.33 Aligned_cols=219 Identities=30% Similarity=0.493 Sum_probs=181.2
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC-----CccEEEECCeecCCc--cH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP-----TKGLITLDGHDLKSL--QV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~-----~~G~I~i~g~~i~~~--~~ 744 (1560)
.|+++|+++.|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 12 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 5999999999963 4589999999999999999999999999999999999985 799999999998643 23
Q ss_pred HHHhccEEEEecCCcCccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCC--CCCcccCCCCCCCChHHHHHH
Q 000406 745 KWLRTQIGMVGQEPILFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPL--GYDTQVGDRGTQLSGGQKQRI 820 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~--gl~t~~~~~g~~LSgGQrQRi 820 (1560)
..+++.++|++|++.+|+.|++||+.++... ...++..+ .+.+.++.+.. ......+..+.+||||||||+
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv 163 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDG-----VVENALRSAALWDETSDRLKSPALSLSGGQQQRL 163 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHH
Confidence 4567789999999999999999999875311 12211111 11222332211 112344566789999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 821 ALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 821 alARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
+|||||+.+|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 164 ~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 242 (258)
T PRK14268 164 CIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFH 242 (258)
T ss_pred HHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 9999999999999999999999999999999999988668999999999999865 99999999999999999998864
No 406
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.8e-38 Score=363.59 Aligned_cols=213 Identities=23% Similarity=0.313 Sum_probs=174.6
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhccc--CCCccEEEECCEecCCCCHHHH-hh
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFY--DPNQGKVMIEGVDLREINVKWL-RK 1390 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~--~p~~G~I~IdGvdi~~i~l~~L-R~ 1390 (1560)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.+||.++...+.... |.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 578999999963 45999999999999999999999999999999999994 7999999999999988877654 45
Q ss_pred ceEEEcCCCCCCCc-cHHHHHhcCCCC---------CCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCC-CCCh
Q 000406 1391 QTALVGQEPALFAG-TIRDNIALGNPK---------ASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGV-QLSG 1455 (1560)
Q Consensus 1391 ~I~~VpQdp~LF~g-TIreNL~~g~~~---------~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~-~LSG 1455 (1560)
.++|+||++.+|.+ |+++|+.+.... .+. +++.++++..++. .. ....... .|||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~---~~~~~~~~~LS~ 147 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMD-------EE---FLNRSVNEGFSG 147 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCc-------hh---hcccccccCcCH
Confidence 59999999998876 899998653110 111 1223333333322 11 1122222 4999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh--cCEEEEEeCCEEEEec
Q 000406 1456 GQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE--ANMIAVVRDGAVVEYG 1532 (1560)
Q Consensus 1456 GQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~--aDrIlVLd~G~IvE~G 1532 (1560)
|||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+.. ||+|++|++|++++.|
T Consensus 148 G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g 227 (243)
T TIGR01978 148 GEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSG 227 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEec
Confidence 99999999999999999999999999999999999999999875 46899999999999976 7999999999999999
Q ss_pred CHHHHHh
Q 000406 1533 SHETLLA 1539 (1560)
Q Consensus 1533 t~~eLl~ 1539 (1560)
+++++..
T Consensus 228 ~~~~~~~ 234 (243)
T TIGR01978 228 DVELAKE 234 (243)
T ss_pred CHHHhcc
Confidence 9986543
No 407
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.3e-38 Score=361.24 Aligned_cols=213 Identities=35% Similarity=0.509 Sum_probs=174.5
Q ss_pred EEEEEEEEEcCCCC-CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccH---HHHh
Q 000406 673 IEFKGVTFAYPSRP-ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQV---KWLR 748 (1560)
Q Consensus 673 i~~~~vs~~y~~~~-~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~---~~lr 748 (1560)
|+++||+++|+... ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996421 1268999999999999999999999999999999999999999999999999987663 4677
Q ss_pred ccEEEEecCC--cCc-cccHHHHHhcCCCCC---CHHHHHHHHHHhhhHHHHHhCCCCCC-cccCCCCCCCChHHHHHHH
Q 000406 749 TQIGMVGQEP--ILF-ATSILENVLMGKENA---TMKEAVAACKAASAHSFISELPLGYD-TQVGDRGTQLSGGQKQRIA 821 (1560)
Q Consensus 749 ~~i~~v~Q~~--~lf-~~Tv~eNi~~g~~~~---~~~~~~~~~~~~~~~~~i~~l~~gl~-t~~~~~g~~LSgGQrQRia 821 (1560)
++++|++|++ .++ ..|++||+.++.... ..++..+.+ ..+.++.+ |+. ...+..+.+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~----~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~ 155 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEA----VLLLLVGV--GLPEEVLNRYPHELSGGQRQRVA 155 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHH----HHHHHHHC--CCChhHhhCCchhcCHHHHHHHH
Confidence 8899999999 344 369999997642111 111111100 12334444 443 4556777899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCcccccc-CCEEEEEeCCeEEEec
Q 000406 822 LARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISV--GRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIG 891 (1560)
Q Consensus 822 lARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G 891 (1560)
|||||+.+|+||||||||++||+.++..+.+.|+++.+ |+|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 156 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 156 IARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999999999999999999998743 8999999999999875 9999999999998764
No 408
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.1e-38 Score=362.27 Aligned_cols=214 Identities=28% Similarity=0.476 Sum_probs=178.8
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHH-HhccE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKW-LRTQI 751 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~-lr~~i 751 (1560)
|+++||++.|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+... .++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 578999999973 35999999999999999999999999999999999999999999999999998776543 46689
Q ss_pred EEEecCCcCccc-cHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCC
Q 000406 752 GMVGQEPILFAT-SILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDP 830 (1560)
Q Consensus 752 ~~v~Q~~~lf~~-Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p 830 (1560)
+|++|++.+|+. |++||+.++........ .+. ..+.+..+ .++....+....+||||||||++|||||+++|
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~-~~~-----~~~~l~~~-~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p 150 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRS-RKI-----PDEIYELF-PVLKEMLGRRGGDLSGGQQQQLAIARALVTRP 150 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcch-HHH-----HHHHHHHH-HhHHHHhhCChhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 99999987532211110 000 01112222 12333456667799999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 831 RILLLDEPTSALDSESESIVQQAIDKISV--GRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 831 ~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
++|||||||++||+.+...+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 ~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 151 KLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred CEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999999988743 7999999999999986 999999999999999998887
No 409
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=372.85 Aligned_cols=222 Identities=28% Similarity=0.470 Sum_probs=182.4
Q ss_pred cccEEEEEEEEEcCCCC--CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCC----c-
Q 000406 670 SGKIEFKGVTFAYPSRP--ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKS----L- 742 (1560)
Q Consensus 670 ~g~i~~~~vs~~y~~~~--~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~----~- 742 (1560)
.+.|+++|++++|++.. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 36799999999997432 1358999999999999999999999999999999999999999999999998852 2
Q ss_pred cHHHHhccEEEEecCC--cCccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCC-cccCCCCCCCChHHH
Q 000406 743 QVKWLRTQIGMVGQEP--ILFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYD-TQVGDRGTQLSGGQK 817 (1560)
Q Consensus 743 ~~~~lr~~i~~v~Q~~--~lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~-t~~~~~g~~LSgGQr 817 (1560)
+...+|+.|+||+|++ .+|..|++|||.++... ...++..+.+ .+.++.+ |+. ...+..+.+||||||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~ll~~~--~L~~~~~~~~~~~LS~Gq~ 156 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKV-----PELLKLV--QLPEDYVKRSPFELSGGQK 156 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCChhHhcCChhhCCHHHH
Confidence 3456778899999998 46778999999875321 1222221111 1223332 342 345667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChh
Q 000406 818 QRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHR 894 (1560)
Q Consensus 818 QRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~ 894 (1560)
||++|||||+.+|++|||||||++||+.+++.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 157 qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (289)
T PRK13645 157 RRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPF 236 (289)
T ss_pred HHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999998874 38999999999998865 9999999999999999988
Q ss_pred hHhh
Q 000406 895 QLLE 898 (1560)
Q Consensus 895 ~l~~ 898 (1560)
++..
T Consensus 237 ~~~~ 240 (289)
T PRK13645 237 EIFS 240 (289)
T ss_pred HHhc
Confidence 8754
No 410
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1.5e-38 Score=367.10 Aligned_cols=218 Identities=31% Similarity=0.552 Sum_probs=182.9
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCc--------
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSL-------- 742 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~-------- 742 (1560)
+.|+++||++.|++ ..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 56999999999963 4699999999999999999999999999999999999999999999999988542
Q ss_pred -----cHHHHhccEEEEecCCcCccc-cHHHHHhcCCC---CCCHHHHHHHHHHhhhHHHHHhCCCCCCccc-CCCCCCC
Q 000406 743 -----QVKWLRTQIGMVGQEPILFAT-SILENVLMGKE---NATMKEAVAACKAASAHSFISELPLGYDTQV-GDRGTQL 812 (1560)
Q Consensus 743 -----~~~~lr~~i~~v~Q~~~lf~~-Tv~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~-~~~g~~L 812 (1560)
....++++++||||++.+++. |++||+.++.. .....+.. ..+.+.++.+ |+.... +..+.+|
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~~L 153 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEAR-----ERAVKYLAKV--GIDERAQGKYPVHL 153 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHH-----HHHHHHHHHc--CCChhhhhCCcccC
Confidence 134567889999999999975 99999976421 11111111 1122344444 554443 5667899
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEe
Q 000406 813 SGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEI 890 (1560)
Q Consensus 813 SgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~ 890 (1560)
|||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.
T Consensus 154 S~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~ 233 (257)
T PRK10619 154 SGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEE 233 (257)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999999874 48999999999999986 999999999999999
Q ss_pred cChhhHhh
Q 000406 891 GNHRQLLE 898 (1560)
Q Consensus 891 G~~~~l~~ 898 (1560)
|+++++..
T Consensus 234 ~~~~~~~~ 241 (257)
T PRK10619 234 GAPEQLFG 241 (257)
T ss_pred CCHHHhhh
Confidence 99988764
No 411
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.4e-38 Score=346.82 Aligned_cols=178 Identities=37% Similarity=0.648 Sum_probs=164.4
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++|++++|+.. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++... ...+++.++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5789999999743 23589999999999999999999999999999999999999999999999988665 556778899
Q ss_pred EEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCCCE
Q 000406 753 MVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRI 832 (1560)
Q Consensus 753 ~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~i 832 (1560)
|++|++.+|+.|++||+ +.+||||||||++||||++.+|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999997 458999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCccccccCCEEEEEeCCeEEEec
Q 000406 833 LLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIG 891 (1560)
Q Consensus 833 llLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G 891 (1560)
|||||||++||+.+++.+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999887789999999999999889999999999998754
No 412
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2.6e-38 Score=366.06 Aligned_cols=223 Identities=28% Similarity=0.394 Sum_probs=184.4
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCC---ccEEEECCEecCCC-----C
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPN---QGKVMIEGVDLREI-----N 1384 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~---~G~I~IdGvdi~~i-----~ 1384 (1560)
-|+++||++.|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|+ +|+|.+||.++... .
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 4899999999963 45999999999999999999999999999999999999986 49999999998654 2
Q ss_pred HHHHhhceEEEcCCCCCCC-ccHHHHHhcCCCC--------------CCHHHHHHHHHHHhHHHHHHhCCCCccccccCC
Q 000406 1385 VKWLRKQTALVGQEPALFA-GTIRDNIALGNPK--------------ASWAEIEEAAEEAYIHKFISSLPQGYETQVGES 1449 (1560)
Q Consensus 1385 l~~LR~~I~~VpQdp~LF~-gTIreNL~~g~~~--------------~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~ 1449 (1560)
...+|+.++|+||++.+|. .|+++|+.++... ...+++.++++..++.+. ....
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~ 149 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHF-----------AHQR 149 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHH-----------HhCC
Confidence 4567889999999999887 5999999865211 012234455555544433 2334
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCC
Q 000406 1450 GVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDG 1526 (1560)
Q Consensus 1450 G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G 1526 (1560)
...||||||||++|||||+.+|+||||||||++||..+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g 229 (262)
T PRK09984 150 VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQG 229 (262)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 457999999999999999999999999999999999999999999998753 7899999999998754 9999999999
Q ss_pred EEEEecCHHHHHhhccChHHHHHHHHh
Q 000406 1527 AVVEYGSHETLLASHLNGVYASLVRAE 1553 (1560)
Q Consensus 1527 ~IvE~Gt~~eLl~~~~~g~y~~l~~~q 1553 (1560)
++++.|+++++ . .....+++...
T Consensus 230 ~i~~~g~~~~~-~---~~~~~~~~~~~ 252 (262)
T PRK09984 230 HVFYDGSSQQF-D---NERFDHLYRSI 252 (262)
T ss_pred EEEEeCCHHHh-c---cHHHHHHHhhh
Confidence 99999999996 3 23455555544
No 413
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=1e-38 Score=358.17 Aligned_cols=207 Identities=31% Similarity=0.538 Sum_probs=173.6
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 578999999974 3589999999999999999999999999999999999999999999999998765432 46799
Q ss_pred EEecCCcCcc-ccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccC
Q 000406 753 MVGQEPILFA-TSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKD 829 (1560)
Q Consensus 753 ~v~Q~~~lf~-~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~ 829 (1560)
|++|++.+|. .|++||+.++... ...++..+ .+.+.++.+ |++......+.+||||||||++|||||+.+
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~laral~~~ 148 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDE-----RVREVAELL--QIEHLLDRKPKQLSGGQRQRVALGRAIVRE 148 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHHHHhCChhhCCHHHHHHHHHHHHHhcC
Confidence 9999999886 4999999875321 11222111 112233443 555556677789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEec
Q 000406 830 PRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIG 891 (1560)
Q Consensus 830 p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G 891 (1560)
|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 149 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 149 PKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999874 38999999999999876 9999999999999875
No 414
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-38 Score=368.03 Aligned_cols=217 Identities=29% Similarity=0.437 Sum_probs=179.9
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC-----CCccEEEECCeecCC--ccH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD-----PTKGLITLDGHDLKS--LQV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~-----~~~G~I~i~g~~i~~--~~~ 744 (1560)
.|+++|++++|++ ..+|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 21 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 5999999999963 458999999999999999999999999999999999864 789999999999864 334
Q ss_pred HHHhccEEEEecCCcCccccHHHHHhcCCCCC---CHH----HHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHH
Q 000406 745 KWLRTQIGMVGQEPILFATSILENVLMGKENA---TMK----EAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQK 817 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~---~~~----~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQr 817 (1560)
..++++|+|++|++.+|+.|++||+.++.... ... .+.++++..++. .++....+..+.+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~~~~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALW-------DEVKDRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCC-------cchHHHHhcCcccCCHHHH
Confidence 46678899999999999999999998753211 111 111222222111 1112334567789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 818 QRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 818 QRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
||++|||||+.+|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988667899999999998865 999999999999999999887
Q ss_pred hh
Q 000406 897 LE 898 (1560)
Q Consensus 897 ~~ 898 (1560)
..
T Consensus 251 ~~ 252 (268)
T PRK14248 251 FT 252 (268)
T ss_pred Hh
Confidence 64
No 415
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-38 Score=376.89 Aligned_cols=227 Identities=29% Similarity=0.441 Sum_probs=185.2
Q ss_pred cEEEEEEEEEcCCCC-------CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccH
Q 000406 672 KIEFKGVTFAYPSRP-------ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~-------~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~ 744 (1560)
.|+++|+++.|+... ...+|+||||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++..++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 489999999997321 2468999999999999999999999999999999999999999999999999987764
Q ss_pred H---HHhccEEEEecCC--cCccc-cHHHHHhcCC---CCCCHHHHHHHHHHhhhHHHHHhCCCCCC-cccCCCCCCCCh
Q 000406 745 K---WLRTQIGMVGQEP--ILFAT-SILENVLMGK---ENATMKEAVAACKAASAHSFISELPLGYD-TQVGDRGTQLSG 814 (1560)
Q Consensus 745 ~---~lr~~i~~v~Q~~--~lf~~-Tv~eNi~~g~---~~~~~~~~~~~~~~~~~~~~i~~l~~gl~-t~~~~~g~~LSg 814 (1560)
. .+|++|+||+|+| .|++. ||.+|+..+. .....++. ...+.++++.+ |++ ......+.+|||
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gL~~~~~~~~p~~LSg 157 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAER-----REKALAMMAKV--GLRPEHYDRYPHMFSG 157 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHH-----HHHHHHHHHHC--CCChHHhcCCCccCCH
Confidence 3 4677899999998 35554 9999986421 11122111 11223344444 443 234667789999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEec
Q 000406 815 GQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIG 891 (1560)
Q Consensus 815 GQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G 891 (1560)
|||||++|||||+.+|+|||+||||++||+.++..+.+.|+++. .|.|+|+|||+++.+.. ||+|++|++|+|+|.|
T Consensus 158 Gq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~ive~g 237 (327)
T PRK11308 158 GQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCVEKG 237 (327)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEC
Confidence 99999999999999999999999999999999999999999874 38999999999999976 9999999999999999
Q ss_pred ChhhHhhhc-chHHH
Q 000406 892 NHRQLLERG-GAYHD 905 (1560)
Q Consensus 892 ~~~~l~~~~-~~~~~ 905 (1560)
+.+++++.. ..|.+
T Consensus 238 ~~~~~~~~p~hpyt~ 252 (327)
T PRK11308 238 TKEQIFNNPRHPYTQ 252 (327)
T ss_pred CHHHHhcCCCCHHHH
Confidence 999998643 34543
No 416
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-38 Score=366.46 Aligned_cols=220 Identities=28% Similarity=0.458 Sum_probs=184.6
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|++. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...++++|
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 58999999999742 24589999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEecCCc-Cc-cccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhc
Q 000406 752 GMVGQEPI-LF-ATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMI 827 (1560)
Q Consensus 752 ~~v~Q~~~-lf-~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~ 827 (1560)
+||+|+|. +| ..|+++|+.++... ...++..+ .+.+.++.+ |+.......+.+||||||||++||||++
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~ 158 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHR-----RVSEALKQV--DMLERADYEPNALSGGQKQRVAIAGVLA 158 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhhCCcccCCHHHHHHHHHHHHHH
Confidence 99999985 44 45899999886422 12222111 112223333 4444455667899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhh
Q 000406 828 KDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 828 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
.+|++|||||||++||+.+.+.+.+.|+++. .|+|+|+|||+++.+..||+|++|++|++++.|+++++...
T Consensus 159 ~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 159 LNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 9999999999999999999999999998874 37999999999999877999999999999999999887653
No 417
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-38 Score=382.85 Aligned_cols=221 Identities=31% Similarity=0.509 Sum_probs=183.0
Q ss_pred cEEEEEEEEEcCCCC---------------------CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCcc
Q 000406 672 KIEFKGVTFAYPSRP---------------------ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKG 730 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~---------------------~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G 730 (1560)
.|+++|+++.|+..+ ...+|+|+||+|++||+++|+||||||||||+++|+|+++|++|
T Consensus 4 ~i~~~~~~k~fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG 83 (400)
T PRK10070 4 KLEIKNLYKIFGEHPQRAFKYIEQGLSKEQILEKTGLSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRG 83 (400)
T ss_pred EEEEeeeEEecCCChHHHHHHHhccccHHHHHhhcCCeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCC
Confidence 467777777775422 12379999999999999999999999999999999999999999
Q ss_pred EEEECCeecCCccHHHH----hccEEEEecCCcCccc-cHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCc
Q 000406 731 LITLDGHDLKSLQVKWL----RTQIGMVGQEPILFAT-SILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDT 803 (1560)
Q Consensus 731 ~I~i~g~~i~~~~~~~l----r~~i~~v~Q~~~lf~~-Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t 803 (1560)
+|.++|.++...+...+ +++|+||+|++.+|+. ||+|||.++... ...++..+ .+.+.++.+ |++.
T Consensus 84 ~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~Tv~enl~~~~~~~~~~~~~~~~-----~~~e~L~~~--gL~~ 156 (400)
T PRK10070 84 QVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHMTVLDNTAFGMELAGINAEERRE-----KALDALRQV--GLEN 156 (400)
T ss_pred EEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCCCHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCCh
Confidence 99999999988765443 4579999999999975 999999886321 11111111 122334443 5555
Q ss_pred ccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEE
Q 000406 804 QVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIV 880 (1560)
Q Consensus 804 ~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~ 880 (1560)
.....+.+||||||||++|||||+.+|+||||||||++||+.+++.+++.|+++. .++|+|+|||+++.+.. ||+|+
T Consensus 157 ~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~ 236 (400)
T PRK10070 157 YAHSYPDELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIA 236 (400)
T ss_pred hhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEE
Confidence 5667778999999999999999999999999999999999999999999998873 48999999999999865 99999
Q ss_pred EEeCCeEEEecChhhHhhh
Q 000406 881 VLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 881 vl~~G~iv~~G~~~~l~~~ 899 (1560)
+|++|++++.|++++++..
T Consensus 237 vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 237 IMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred EEECCEEEecCCHHHHHhC
Confidence 9999999999999998764
No 418
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-38 Score=363.83 Aligned_cols=217 Identities=30% Similarity=0.521 Sum_probs=182.1
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCC-----ccEEEECCeecCCc--cH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPT-----KGLITLDGHDLKSL--QV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~-----~G~I~i~g~~i~~~--~~ 744 (1560)
.|+++|++++|++ +.+|+|+||+|++|++++|+|+||||||||+++|+|+++|+ +|+|.++|.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 5899999999963 45999999999999999999999999999999999999987 69999999998643 34
Q ss_pred HHHhccEEEEecCCcCccccHHHHHhcCCCC--CC-HHH----HHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHH
Q 000406 745 KWLRTQIGMVGQEPILFATSILENVLMGKEN--AT-MKE----AVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQK 817 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~--~~-~~~----~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQr 817 (1560)
..+|+.++||+|++.+|+.|++||+.++... .. .++ +.++++..++.+ ++....+..+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWD-------EVKDNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCch-------hhhhHhhCCcccCCHHHH
Confidence 5678899999999999989999999876321 11 111 111222222221 122345677889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 818 QRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 818 QRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988668999999999999876 899999999999999999887
Q ss_pred hh
Q 000406 897 LE 898 (1560)
Q Consensus 897 ~~ 898 (1560)
..
T Consensus 234 ~~ 235 (251)
T PRK14249 234 FS 235 (251)
T ss_pred Hh
Confidence 64
No 419
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-38 Score=368.92 Aligned_cols=221 Identities=31% Similarity=0.485 Sum_probs=184.4
Q ss_pred cEEEEEEEEEcCCCC---CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCcc-HHHH
Q 000406 672 KIEFKGVTFAYPSRP---ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQ-VKWL 747 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~---~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~-~~~l 747 (1560)
.|+++|++++|++.. .+++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.+.. ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999997421 246999999999999999999999999999999999999999999999999987643 3456
Q ss_pred hccEEEEecCCc--CccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHH
Q 000406 748 RTQIGMVGQEPI--LFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALA 823 (1560)
Q Consensus 748 r~~i~~v~Q~~~--lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialA 823 (1560)
+++++||||+|. ++..|+.+|+.++... ....+..+ .+.+.++.+ |+....+....+||||||||++||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LS~G~~qrv~la 156 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRE-----RVDESLKKV--GMYEYRRHAPHLLSGGQKQRVAIA 156 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHH-----HHHHHHHHC--CCHhHhhCCcccCCHHHHHHHHHH
Confidence 788999999984 6667999999886321 12221111 112223332 455555666789999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhhh
Q 000406 824 RAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 824 RAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
|||+.+|++|||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+..||++++|++|++++.|+++++...
T Consensus 157 ral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (280)
T PRK13633 157 GILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIFKE 234 (280)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999999874 38999999999999877999999999999999999998653
No 420
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=2.2e-38 Score=373.02 Aligned_cols=215 Identities=24% Similarity=0.407 Sum_probs=185.4
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. +...++++++
T Consensus 3 l~~~~l~~~~~~---~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYGT---QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEECC---EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 789999999963 469999999999999999999999999999999999999999999999999876 3456788999
Q ss_pred EEecCCcCccc-cHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccC
Q 000406 753 MVGQEPILFAT-SILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKD 829 (1560)
Q Consensus 753 ~v~Q~~~lf~~-Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~ 829 (1560)
|+||++.+++. |+.||+.+.... ...++..+ .+++.++.+ |++...+....+||||||||++|||||+.+
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQ-----RVEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIHD 151 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 99999999976 999999763211 11121111 122344444 666667777889999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 830 PRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 830 p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
|++|||||||++||+.+.+.+++.|+++.+++|+|++||+++.+.. ||||++|++|+++..|+++++..
T Consensus 152 p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 221 (301)
T TIGR03522 152 PKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSA 221 (301)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHH
Confidence 9999999999999999999999999998778999999999999876 99999999999999999999865
No 421
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.2e-38 Score=337.73 Aligned_cols=219 Identities=27% Similarity=0.436 Sum_probs=187.2
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHH-Hhhc
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKW-LRKQ 1391 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~-LR~~ 1391 (1560)
-++++||+..|.. ..+|++|||++++||+++++||||+|||||+++|+|+.+|.+|+|.++|.||+..+++. .|.-
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 3789999999963 46999999999999999999999999999999999999999999999999999999876 4778
Q ss_pred eEEEcCCCCCCCc-cHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccC
Q 000406 1392 TALVGQEPALFAG-TIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKG 1470 (1560)
Q Consensus 1392 I~~VpQdp~LF~g-TIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~ 1470 (1560)
|+||||...+|+. ||.|||.+|.-...+++-+ ...+++.-+-+| -|.......+.+|||||+|-+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~----~~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQ----ERDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhcccccccc----cccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 9999999999975 9999999873222111111 111222223344 355566677789999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1471 SRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1471 p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|++|+|||||.+|-|.--+.|.++|+++.+ +.||++|-++...... +||.+||++|+|+..|+.+||.+
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~ 226 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLA 226 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhc
Confidence 999999999999999999999999999874 4599999999998765 99999999999999999999997
No 422
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.3e-38 Score=381.21 Aligned_cols=205 Identities=27% Similarity=0.414 Sum_probs=172.0
Q ss_pred ccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCe----ecCCccHHHH---h-ccEEEEecCCc
Q 000406 688 TVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGH----DLKSLQVKWL---R-TQIGMVGQEPI 759 (1560)
Q Consensus 688 ~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~----~i~~~~~~~l---r-~~i~~v~Q~~~ 759 (1560)
..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|+++|. ++...+...+ | ++|+||+|++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 46899999999999999999999999999999999999999999999996 5666554433 3 57999999999
Q ss_pred Ccc-ccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCCCEEEEe
Q 000406 760 LFA-TSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRILLLD 836 (1560)
Q Consensus 760 lf~-~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~illLD 836 (1560)
+|+ .|++||+.++... ...++.. ..+.+.++.+ |++......+.+||||||||++|||||+.+|+|||||
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~-----~~a~e~le~v--gL~~~~~~~~~~LSgGq~QRV~LARALa~~P~ILLlD 189 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERR-----KRVDEQLELV--GLAQWADKKPGELSGGMQQRVGLARAFAMDADILLMD 189 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEE
Confidence 998 5999999987421 1111111 1222334443 5555556677899999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 837 EPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 837 Epts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
||||+||+.++..+++.|.++. .++|+|+|||+++.+.. ||+|++|++|++++.|++++++.+
T Consensus 190 EPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 190 EPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 9999999999999999998874 38999999999999855 999999999999999999999754
No 423
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-38 Score=367.20 Aligned_cols=217 Identities=29% Similarity=0.430 Sum_probs=182.3
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|++ ..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 5899999999963 4699999999999999999999999999999999999999999999999999877777788899
Q ss_pred EEEecCCcCccc-cHHHHHhcCCCCC------CHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHH
Q 000406 752 GMVGQEPILFAT-SILENVLMGKENA------TMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALAR 824 (1560)
Q Consensus 752 ~~v~Q~~~lf~~-Tv~eNi~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialAR 824 (1560)
+|++|++.++.. |+.||+.++.... ...... ..+.+.++.+ |+...+.....+||||||||++|||
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~lar 160 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADR-----EKVEEAISLV--GLKPLAHRLVDSLSGGERQRAWIAM 160 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHH-----HHHHHHHHHc--CCHHHhcCCcccCCHHHHHHHHHHH
Confidence 999999877765 9999998753210 000000 1112223332 3434455566789999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 825 AMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 825 Al~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
||+.+|+||||||||++||+.+.+.+.+.|.++. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 161 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 161 LVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 9999999999999999999999999999999874 38999999999999865 99999999999999999988764
No 424
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.4e-38 Score=366.30 Aligned_cols=216 Identities=31% Similarity=0.517 Sum_probs=182.5
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCcc---------
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQ--------- 743 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~--------- 743 (1560)
|+++||++.|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++..++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 578999999963 45899999999999999999999999999999999999999999999999986542
Q ss_pred ----HHHHhccEEEEecCCcCcc-ccHHHHHhcCCC---CCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChH
Q 000406 744 ----VKWLRTQIGMVGQEPILFA-TSILENVLMGKE---NATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGG 815 (1560)
Q Consensus 744 ----~~~lr~~i~~v~Q~~~lf~-~Tv~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgG 815 (1560)
...+++.++|++|++.+|. .|+.||+.++.. ....++.. ..+.+.++.+ |++...+..+.+||||
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G 150 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAE-----KRAMELLDMV--GLADKADHMPAQLSGG 150 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhHhhcChhhcCHH
Confidence 2356788999999999886 699999987521 11111111 1223445554 5555667777899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecC
Q 000406 816 QKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGN 892 (1560)
Q Consensus 816 QrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~ 892 (1560)
||||++|||||+.+|++|||||||++||+.++..+.+.|+++. .++|+|+|||+++.+.. ||++++|++|++++.|+
T Consensus 151 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 230 (252)
T TIGR03005 151 QQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGK 230 (252)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999999874 38999999999999865 99999999999999999
Q ss_pred hhhHhh
Q 000406 893 HRQLLE 898 (1560)
Q Consensus 893 ~~~l~~ 898 (1560)
++++..
T Consensus 231 ~~~~~~ 236 (252)
T TIGR03005 231 PDEIFR 236 (252)
T ss_pred HHHHhc
Confidence 988764
No 425
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-38 Score=368.10 Aligned_cols=220 Identities=31% Similarity=0.525 Sum_probs=185.3
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCc---cEEEECCeecCCccHHHH
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTK---GLITLDGHDLKSLQVKWL 747 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~---G~I~i~g~~i~~~~~~~l 747 (1560)
+.|+++|++++|+.. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++ |+|.++|.++...+...+
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 358999999999642 2458999999999999999999999999999999999999998 899999999987766677
Q ss_pred hccEEEEecCCc--CccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHH
Q 000406 748 RTQIGMVGQEPI--LFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALA 823 (1560)
Q Consensus 748 r~~i~~v~Q~~~--lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialA 823 (1560)
+++|+||+|+|. ++..|+.|||.++... .+.++..+ .+.+.++.+ |+....+....+||||||||++||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LS~G~~qrv~la 155 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIK-----IVRDVLADV--GMLDYIDSEPANLSGGQKQRVAIA 155 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHH-----HHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHH
Confidence 889999999984 5577999999876322 22222111 112233333 455556677789999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCccccccCCEEEEEeCCeEEEecChhhHhh
Q 000406 824 RAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 824 RAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
|||+.+|++|||||||++||+.++..+.+.|+++. .|+|||++||+++.+..||+|++|++|++++.|+++++..
T Consensus 156 ral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 156 GILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999998874 3899999999999987799999999999999999988765
No 426
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=365.09 Aligned_cols=219 Identities=30% Similarity=0.472 Sum_probs=180.8
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcC---CCC--CccEEEECCeecCCc--cH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERF---YDP--TKGLITLDGHDLKSL--QV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~---~~~--~~G~I~i~g~~i~~~--~~ 744 (1560)
.|+++|+++.|+. ..+|+|+||+|++||+++|+|+||||||||+++|+|+ ++| ++|+|.++|+++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 5899999999963 4589999999999999999999999999999999997 454 589999999998653 34
Q ss_pred HHHhccEEEEecCCcCccccHHHHHhcCCCCC---CHHHHHHHHHHhhhHHHHHhCC--CCCCcccCCCCCCCChHHHHH
Q 000406 745 KWLRTQIGMVGQEPILFATSILENVLMGKENA---TMKEAVAACKAASAHSFISELP--LGYDTQVGDRGTQLSGGQKQR 819 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~---~~~~~~~~~~~~~~~~~i~~l~--~gl~t~~~~~g~~LSgGQrQR 819 (1560)
..+++.|+|+||++.+|+.|++||+.++.... ..+...+. +.+.++.+. ..+.+..+..+.+||||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 154 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQR-----VEETLKGAALWDEVKDKLKESAFALSGGQQQR 154 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHH-----HHHHHHHcCCCcchhhhhhCCcccCCHHHHHH
Confidence 56778899999999999889999998753211 11111111 122233331 112234567788999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 820 IALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 820 ialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
++|||||+.+|+||||||||++||+.+++.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 155 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~ 234 (250)
T PRK14245 155 LCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFT 234 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999999999998778999999999999865 99999999999999999998865
No 427
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-38 Score=364.37 Aligned_cols=220 Identities=29% Similarity=0.444 Sum_probs=180.1
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCC--CC---CccEEEECCeecCCc--cH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFY--DP---TKGLITLDGHDLKSL--QV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~--~~---~~G~I~i~g~~i~~~--~~ 744 (1560)
.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|++ .| ++|+|.++|+++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999963 35899999999999999999999999999999999985 36 599999999998643 34
Q ss_pred HHHhccEEEEecCCcCccccHHHHHhcCCCC--CC-HHHHHHHHHHhhhHHHHHhCC--CCCCcccCCCCCCCChHHHHH
Q 000406 745 KWLRTQIGMVGQEPILFATSILENVLMGKEN--AT-MKEAVAACKAASAHSFISELP--LGYDTQVGDRGTQLSGGQKQR 819 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~--~~-~~~~~~~~~~~~~~~~i~~l~--~gl~t~~~~~g~~LSgGQrQR 819 (1560)
..+|+.++||+|++.+|+.|++||+.++... .. .+...+. +.+.++.+. .++.+..+..+.+||||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qr 156 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEA-----VEKSLKGASIWDEVKDRLHDSALGLSGGQQQR 156 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHH-----HHHHHHHcCCchhHHHHHhcCcccCCHHHHHH
Confidence 4567889999999999999999999875211 11 1111111 112222221 112234566778999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 820 IALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 820 ialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
++|||||+.+|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 157 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 236 (252)
T PRK14239 157 VCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMFM 236 (252)
T ss_pred HHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999988667999999999998865 99999999999999999998865
Q ss_pred h
Q 000406 899 R 899 (1560)
Q Consensus 899 ~ 899 (1560)
.
T Consensus 237 ~ 237 (252)
T PRK14239 237 N 237 (252)
T ss_pred C
Confidence 3
No 428
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=1.9e-38 Score=373.97 Aligned_cols=199 Identities=23% Similarity=0.395 Sum_probs=170.8
Q ss_pred ccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceEEEcCCCCCCCc-cHH
Q 000406 1329 VTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEPALFAG-TIR 1407 (1560)
Q Consensus 1329 ~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~~VpQdp~LF~g-TIr 1407 (1560)
.++|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|++++|+||++.+|.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 369999999999999999999999999999999999999999999999999876 345678899999999999876 999
Q ss_pred HHHhcCCC--CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCc
Q 000406 1408 DNIALGNP--KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASS 1481 (1560)
Q Consensus 1408 eNL~~g~~--~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTS 1481 (1560)
|||.+... ..+. +++.++++..++.+. ......+||||||||++|||||+.+|++|||||||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFELGEA-----------ADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhH-----------hCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99986321 1122 234444555444322 223345799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1482 ALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1482 aLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
+||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~ 213 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKR 213 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHH
Confidence 999999999999999874 46899999999999976 99999999999999999999976
No 429
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-38 Score=364.83 Aligned_cols=222 Identities=24% Similarity=0.458 Sum_probs=185.3
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHH-Hhcc
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKW-LRTQ 750 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~-lr~~ 750 (1560)
.|+++|++++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+... .+..
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFGG---LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEECC---EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 4899999999963 46999999999999999999999999999999999999999999999999998776544 3456
Q ss_pred EEEEecCCcCccc-cHHHHHhcCCCCCCH----------HHH--HHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHH
Q 000406 751 IGMVGQEPILFAT-SILENVLMGKENATM----------KEA--VAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQK 817 (1560)
Q Consensus 751 i~~v~Q~~~lf~~-Tv~eNi~~g~~~~~~----------~~~--~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQr 817 (1560)
++|++|++.+|.. |++||+.++...... ... ........+.++++.+ |+....+..+.+||||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~ 159 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERV--GLLEHANRQAGNLAYGQQ 159 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhC--ChhhhhhCChhhCCHHHH
Confidence 9999999999986 999999975321000 000 0001111233445554 666667788889999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-C-CcEEEEEecCcccccc-CCEEEEEeCCeEEEecChh
Q 000406 818 QRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-V-GRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHR 894 (1560)
Q Consensus 818 QRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~-~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~ 894 (1560)
||++|||||+.+|++|||||||++||+.+.+.+.+.|.++. + |+|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 160 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~ 239 (255)
T PRK11300 160 RRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPE 239 (255)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHH
Confidence 99999999999999999999999999999999999998874 3 7899999999999866 9999999999999999988
Q ss_pred hHhh
Q 000406 895 QLLE 898 (1560)
Q Consensus 895 ~l~~ 898 (1560)
++..
T Consensus 240 ~~~~ 243 (255)
T PRK11300 240 EIRN 243 (255)
T ss_pred HHhh
Confidence 8754
No 430
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-38 Score=364.86 Aligned_cols=217 Identities=29% Similarity=0.461 Sum_probs=180.0
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC-----CCccEEEECCeecCC--ccH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD-----PTKGLITLDGHDLKS--LQV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~-----~~~G~I~i~g~~i~~--~~~ 744 (1560)
.|+++|++++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4899999999963 459999999999999999999999999999999999997 479999999999854 334
Q ss_pred HHHhccEEEEecCCcCccccHHHHHhcCCCC--CC-HHHHHHHHHHhhhHHHHHhCCCCC----CcccCCCCCCCChHHH
Q 000406 745 KWLRTQIGMVGQEPILFATSILENVLMGKEN--AT-MKEAVAACKAASAHSFISELPLGY----DTQVGDRGTQLSGGQK 817 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~--~~-~~~~~~~~~~~~~~~~i~~l~~gl----~t~~~~~g~~LSgGQr 817 (1560)
..+++.++|++|++.+|+.|++||+.++... .. .+...+. +.+.++.+ |+ ....+..+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQR-----VEESLKQA--AIWKETKDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHH-----HHHHHHHc--CCCcchHHHhccChhhCCHHHH
Confidence 5667889999999999989999999875321 11 1111111 11222222 22 1234566789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 818 QRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 818 QRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988667999999999999866 999999999999999999887
Q ss_pred hh
Q 000406 897 LE 898 (1560)
Q Consensus 897 ~~ 898 (1560)
..
T Consensus 234 ~~ 235 (251)
T PRK14251 234 FI 235 (251)
T ss_pred Hh
Confidence 64
No 431
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-38 Score=363.03 Aligned_cols=204 Identities=29% Similarity=0.457 Sum_probs=174.4
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++. .+++.+
T Consensus 12 ~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDT 83 (257)
T ss_pred cEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCce
Confidence 4999999999963 45899999999999999999999999999999999999999999999998753 456789
Q ss_pred EEEecCCcCcc-ccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCC
Q 000406 752 GMVGQEPILFA-TSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDP 830 (1560)
Q Consensus 752 ~~v~Q~~~lf~-~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p 830 (1560)
+|++|++.+|+ .|++||+.++......+++. +.++.+ |+....+..+.+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~---------~~l~~~--gl~~~~~~~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAAL---------QALAAV--GLADRANEWPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHH---------HHHHHc--CChhHhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 59999998864221112222 233333 4555556777899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChh
Q 000406 831 RILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHR 894 (1560)
Q Consensus 831 ~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~ 894 (1560)
++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999998863 47999999999999865 9999999999999987754
No 432
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2.1e-38 Score=358.96 Aligned_cols=214 Identities=24% Similarity=0.379 Sum_probs=170.6
Q ss_pred EEEEEEEEEcCCCC-CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC---CCccEEEECCEecCCCCHHHHh
Q 000406 1314 IELKMVTFTYPSRP-EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD---PNQGKVMIEGVDLREINVKWLR 1389 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~-~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~---p~~G~I~IdGvdi~~i~l~~LR 1389 (1560)
++|+||+++|+... .+++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.++|.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 67999999997542 3579999999999999999999999999999999999999 99999999999875 34678
Q ss_pred hceEEEcCCCCCCCc-cHHHHHhcCCCCCCHHHHHHHHHHHhHHH-HHHhCCCCccccccCCCCCCChHHHHHHHHHHHH
Q 000406 1390 KQTALVGQEPALFAG-TIRDNIALGNPKASWAEIEEAAEEAYIHK-FISSLPQGYETQVGESGVQLSGGQKQRIAIARAI 1467 (1560)
Q Consensus 1390 ~~I~~VpQdp~LF~g-TIreNL~~g~~~~sd~eI~~al~~a~l~~-~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARAL 1467 (1560)
+.++|+||++.+|++ |++||+.++..........+..+....++ .+..+ +++.........||||||||++|||||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHHHHHH
Confidence 899999999999987 99999986421100000000111111111 22221 333333445568999999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecCh-HHH-hhcCEEEEEeCCEEEEec
Q 000406 1468 LKGSRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRL-STI-REANMIAVVRDGAVVEYG 1532 (1560)
Q Consensus 1468 Lr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRl-sti-~~aDrIlVLd~G~IvE~G 1532 (1560)
+++|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||++ ..+ ..||+|++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999864 468999999998 455 559999999999999876
No 433
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=2.6e-37 Score=402.25 Aligned_cols=110 Identities=26% Similarity=0.483 Sum_probs=95.4
Q ss_pred Cccc-cccCCCCCCChHHHHHHHHHHHHccCC---CEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHh
Q 000406 1441 GYET-QVGESGVQLSGGQKQRIAIARAILKGS---RVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIR 1515 (1560)
Q Consensus 1441 Gldt-~Vge~G~~LSGGQrQRLaLARALLr~p---~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~ 1515 (1560)
|++. .++.....|||||||||+|||+|+++| +|+||||||++||+.+.+.+.+.|+++. ++.|||+|+|+++.+.
T Consensus 818 gL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~ 897 (943)
T PRK00349 818 GLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK 897 (943)
T ss_pred CCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence 4543 356777889999999999999999999 9999999999999999999999999874 5789999999999999
Q ss_pred hcCEEEEE------eCCEEEEecCHHHHHhhccChHHHHHHH
Q 000406 1516 EANMIAVV------RDGAVVEYGSHETLLASHLNGVYASLVR 1551 (1560)
Q Consensus 1516 ~aDrIlVL------d~G~IvE~Gt~~eLl~~~~~g~y~~l~~ 1551 (1560)
.||+|++| ++|+|++.|+++++.++ .++.-.+..+
T Consensus 898 ~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~-~~s~t~~~l~ 938 (943)
T PRK00349 898 TADWIIDLGPEGGDGGGEIVATGTPEEVAKV-EASYTGRYLK 938 (943)
T ss_pred hCCEEEEecCCcCCCCCEEEEeCCHHHHHhC-cccHHHHHHH
Confidence 99999999 79999999999999973 3444444443
No 434
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-38 Score=366.97 Aligned_cols=219 Identities=31% Similarity=0.493 Sum_probs=182.9
Q ss_pred cccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC-----CccEEEECCeecCC--c
Q 000406 670 SGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP-----TKGLITLDGHDLKS--L 742 (1560)
Q Consensus 670 ~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~-----~~G~I~i~g~~i~~--~ 742 (1560)
.+.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 346999999999963 3589999999999999999999999999999999999874 89999999999864 3
Q ss_pred cHHHHhccEEEEecCCcCccccHHHHHhcCCCC--C-CH----HHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChH
Q 000406 743 QVKWLRTQIGMVGQEPILFATSILENVLMGKEN--A-TM----KEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGG 815 (1560)
Q Consensus 743 ~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgG 815 (1560)
+...+|+.++|++|++.+|+.|++||+.++... . .. +++.++++..++.+. +.+..+..+.+||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDE-------VKDRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChh-------HHHHhhCCcccCCHH
Confidence 455678899999999999988999999875321 1 11 112222222222211 123456777899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChh
Q 000406 816 QKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHR 894 (1560)
Q Consensus 816 QrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~ 894 (1560)
||||++|||||+++|+||||||||++||+.++..+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999999999999988668999999999999865 9999999999999999998
Q ss_pred hHhh
Q 000406 895 QLLE 898 (1560)
Q Consensus 895 ~l~~ 898 (1560)
++..
T Consensus 253 ~~~~ 256 (272)
T PRK14236 253 TLFT 256 (272)
T ss_pred HHhc
Confidence 8764
No 435
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-38 Score=364.87 Aligned_cols=216 Identities=27% Similarity=0.442 Sum_probs=182.8
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999963 46999999999999999999999999999999999999999999999999988777777788899
Q ss_pred EEecCCcCccc-cHHHHHhcCCCCC----C--HHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHH
Q 000406 753 MVGQEPILFAT-SILENVLMGKENA----T--MKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARA 825 (1560)
Q Consensus 753 ~v~Q~~~lf~~-Tv~eNi~~g~~~~----~--~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARA 825 (1560)
|++|++.++.+ |+.||+.++.... . .++.. ..+.+.++.+ |++......+..||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lara 152 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDN-----ARVNQAMEQT--RINHLADRRLTDLSGGQRQRAFLAMV 152 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHH-----HHHHHHHHHc--CCHHHHcCCcccCCHHHHHHHHHHHH
Confidence 99999988876 9999998863210 0 01100 1111223322 44444566778999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 826 MIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 826 l~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
++.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 153 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 153 LAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 999999999999999999999999999998874 48999999999999875 99999999999999999988764
No 436
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-38 Score=362.17 Aligned_cols=217 Identities=29% Similarity=0.520 Sum_probs=182.3
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCC------ccHH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKS------LQVK 745 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~------~~~~ 745 (1560)
.|+++|+++.|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.. .+..
T Consensus 2 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T PRK11124 2 SIQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIR 78 (242)
T ss_pred EEEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHH
Confidence 3789999999963 359999999999999999999999999999999999999999999999998731 2334
Q ss_pred HHhccEEEEecCCcCccc-cHHHHHhcCCC---CCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHH
Q 000406 746 WLRTQIGMVGQEPILFAT-SILENVLMGKE---NATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIA 821 (1560)
Q Consensus 746 ~lr~~i~~v~Q~~~lf~~-Tv~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRia 821 (1560)
.+|++|+|++|++.+|.+ |++|||.++.. ....++.. ..+.++++.+ |++..++....+||||||||++
T Consensus 79 ~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~ 151 (242)
T PRK11124 79 ELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQAL-----ARAEKLLERL--RLKPYADRFPLHLSGGQQQRVA 151 (242)
T ss_pred HHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHH
Confidence 667889999999999975 99999974311 11111111 1233445554 5666677778899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 822 LARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 822 lARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
|||||+.+|+||||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 152 laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 152 IARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 9999999999999999999999999999999999874 48999999999999865 99999999999999999887643
No 437
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-38 Score=367.18 Aligned_cols=217 Identities=28% Similarity=0.419 Sum_probs=179.6
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecC--CccHHHHhcc
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLK--SLQVKWLRTQ 750 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~--~~~~~~lr~~ 750 (1560)
|+++||+++|++ ..+|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++. ..+...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 789999999963 45899999999999999999999999999999999999999999999999985 2344567788
Q ss_pred EEEEecCCc--CccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHh
Q 000406 751 IGMVGQEPI--LFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAM 826 (1560)
Q Consensus 751 i~~v~Q~~~--lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl 826 (1560)
|+||+|++. ++..|+.+|+.++... ...++..+. +.+.++.+ |+.........+||||||||++|||||
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~laraL 151 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRR-----VDEALTLV--DAQHFRHQPIQCLSHGQKKRVAIAGAL 151 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCHhHhcCCchhCCHHHHHHHHHHHHH
Confidence 999999985 5667899999874211 122222111 12223333 333334556779999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 827 IKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 827 ~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
+.+|+||||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 152 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 152 VLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999998874 58999999999999865 999999999999999999887653
No 438
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.4e-38 Score=356.65 Aligned_cols=205 Identities=35% Similarity=0.591 Sum_probs=171.8
Q ss_pred EEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEEE
Q 000406 674 EFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIGM 753 (1560)
Q Consensus 674 ~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~~ 753 (1560)
+++|++++|++. ...+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...++++|+|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 468999999642 2458999999999999999999999999999999999999999999999999987777777889999
Q ss_pred EecCCc--CccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccC
Q 000406 754 VGQEPI--LFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKD 829 (1560)
Q Consensus 754 v~Q~~~--lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~ 829 (1560)
++|++. ++..|++||+.++... ....+..+ .+.+.++.+ |++..+...+.+||||||||++|||||+.+
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral~~~ 152 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEE-----RVEEALELV--GLEGLRDRSPFTLSGGQKQRVAIAGVLAMD 152 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcC
Confidence 999984 5667999999875321 11111111 122334443 455556677789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCe
Q 000406 830 PRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGS 886 (1560)
Q Consensus 830 p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~ 886 (1560)
|++|||||||++||+.++..+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|+
T Consensus 153 p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 153 PDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999998874 48999999999999987 99999999985
No 439
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.7e-38 Score=356.79 Aligned_cols=206 Identities=34% Similarity=0.540 Sum_probs=171.7
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccH---HHHhc
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQV---KWLRT 749 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~---~~lr~ 749 (1560)
|+++|++++|+.. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. ...|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4789999999632 358999999999999999999999999999999999999999999999999877653 34677
Q ss_pred cEEEEecCCcCccc-cHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHh
Q 000406 750 QIGMVGQEPILFAT-SILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAM 826 (1560)
Q Consensus 750 ~i~~v~Q~~~lf~~-Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl 826 (1560)
.++||+|++.+|+. |++||+.++... ...++..+ .+.+.++.+ |++........+||||||||++|||||
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 151 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRK-----RVPAALELV--GLSHKHRALPAELSGGEQQRVAIARAI 151 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCChhhcCHHHHHHHHHHHHH
Confidence 89999999999985 999999875321 11221111 112233333 454455566779999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeE
Q 000406 827 IKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSV 887 (1560)
Q Consensus 827 ~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~i 887 (1560)
+.+|+||||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++
T Consensus 152 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 152 VNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999873 58999999999999976 999999999974
No 440
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.9e-38 Score=370.24 Aligned_cols=213 Identities=28% Similarity=0.497 Sum_probs=182.0
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|+. ...+|+||||+|++|+++||+||||||||||+++|+|++.|++|+|.++|.+...- ....+++|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4788999999973 24699999999999999999999999999999999999999999999999998765 66778899
Q ss_pred EEEecCCcCccc-cHHHHHhcCCCCC--C----HHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHH
Q 000406 752 GMVGQEPILFAT-SILENVLMGKENA--T----MKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALAR 824 (1560)
Q Consensus 752 ~~v~Q~~~lf~~-Tv~eNi~~g~~~~--~----~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialAR 824 (1560)
|||||+|.+++. |++||+.|..... . .+++.+. ++.+ |++...+....+||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~---------l~~~--~L~~~~~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEEL---------LELF--GLEDKANKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHH---------HHHc--CCchhhCcchhhcCHHHHHHHHHHH
Confidence 999999998876 9999998743211 1 1223333 3333 3333225557789999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC-C-cEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 825 AMIKDPRILLLDEPTSALDSESESIVQQAIDKISV-G-RTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 825 Al~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~-~-~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
||+.+|++|||||||++|||.++..+.+.|+++.+ | +||+++||.++.+.. ||+|++|++|+++..|+++++..
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~ 226 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKE 226 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999854 5 799999999999987 99999999999999999988754
No 441
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-38 Score=362.63 Aligned_cols=219 Identities=28% Similarity=0.484 Sum_probs=180.8
Q ss_pred cccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC--C---CccEEEECCeecCCc--
Q 000406 670 SGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD--P---TKGLITLDGHDLKSL-- 742 (1560)
Q Consensus 670 ~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~--~---~~G~I~i~g~~i~~~-- 742 (1560)
++.|+++|++++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.++...
T Consensus 2 ~~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~ 78 (252)
T PRK14256 2 NNKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGV 78 (252)
T ss_pred CcEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccC
Confidence 357999999999963 459999999999999999999999999999999999986 4 689999999998643
Q ss_pred cHHHHhccEEEEecCCcCcc-ccHHHHHhcCCCC---CCHHH----HHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCCh
Q 000406 743 QVKWLRTQIGMVGQEPILFA-TSILENVLMGKEN---ATMKE----AVAACKAASAHSFISELPLGYDTQVGDRGTQLSG 814 (1560)
Q Consensus 743 ~~~~lr~~i~~v~Q~~~lf~-~Tv~eNi~~g~~~---~~~~~----~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSg 814 (1560)
....+|+.|+||||++.+|. .|++||+.++... ....+ +.++++..++.++ +....+..+.+|||
T Consensus 79 ~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~ 151 (252)
T PRK14256 79 DPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDE-------VKDRLKSNAMELSG 151 (252)
T ss_pred ChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchh-------hhHHhhCCcCcCCH
Confidence 34467888999999999998 5999999865311 11111 1222222222111 11234556789999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecCh
Q 000406 815 GQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNH 893 (1560)
Q Consensus 815 GQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~ 893 (1560)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|++
T Consensus 152 G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 231 (252)
T PRK14256 152 GQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGET 231 (252)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999998777899999999999865 999999999999999999
Q ss_pred hhHhh
Q 000406 894 RQLLE 898 (1560)
Q Consensus 894 ~~l~~ 898 (1560)
+++..
T Consensus 232 ~~~~~ 236 (252)
T PRK14256 232 KKIFT 236 (252)
T ss_pred HHHHh
Confidence 88764
No 442
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-38 Score=366.08 Aligned_cols=218 Identities=25% Similarity=0.411 Sum_probs=184.2
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhcc
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQ 750 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~ 750 (1560)
..|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.
T Consensus 6 ~~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (265)
T PRK10253 6 ARLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARR 82 (265)
T ss_pred cEEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhh
Confidence 46999999999973 459999999999999999999999999999999999999999999999999987777777788
Q ss_pred EEEEecCCcCcc-ccHHHHHhcCCCCC------CHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHH
Q 000406 751 IGMVGQEPILFA-TSILENVLMGKENA------TMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALA 823 (1560)
Q Consensus 751 i~~v~Q~~~lf~-~Tv~eNi~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialA 823 (1560)
|+||+|++.+|. .|++||+.++.... ..+.. ...+.+.++.+ |++......+.+||||||||++||
T Consensus 83 i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrv~la 155 (265)
T PRK10253 83 IGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKED-----EEAVTKAMQAT--GITHLADQSVDTLSGGQRQRAWIA 155 (265)
T ss_pred eEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHH-----HHHHHHHHHHc--CCHHHhcCCcccCChHHHHHHHHH
Confidence 999999998876 59999998753110 00110 11112233332 444455667789999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 824 RAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 824 RAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
||++++|++|||||||++||+.+...+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 156 ral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (265)
T PRK10253 156 MVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIVT 233 (265)
T ss_pred HHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhh
Confidence 99999999999999999999999999999998874 38899999999998865 99999999999999999988764
No 443
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-38 Score=362.54 Aligned_cols=217 Identities=29% Similarity=0.450 Sum_probs=182.8
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|++++|++ ..+|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 2 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i 78 (258)
T PRK13548 2 MLEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRR 78 (258)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhhe
Confidence 3789999999973 4589999999999999999999999999999999999999999999999999877777777889
Q ss_pred EEEecCCcC-ccccHHHHHhcCCCCC--CHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhc-
Q 000406 752 GMVGQEPIL-FATSILENVLMGKENA--TMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMI- 827 (1560)
Q Consensus 752 ~~v~Q~~~l-f~~Tv~eNi~~g~~~~--~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~- 827 (1560)
+|++|++.+ +..|++||+.++.... ..++..+ .+.+.++.+ |+.........+||||||||++|||||+
T Consensus 79 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGe~qrv~la~al~~ 151 (258)
T PRK13548 79 AVLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDA-----LVAAALAQV--DLAHLAGRDYPQLSGGEQQRVQLARVLAQ 151 (258)
T ss_pred EEEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHH-----HHHHHHHHc--CCHhHhcCCcccCCHHHHHHHHHHHHHhc
Confidence 999999987 4569999998764211 1111111 112233333 4544556677899999999999999999
Q ss_pred -----cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 828 -----KDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 828 -----~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
.+|++|||||||++||+.+...+.+.|+++. +++|||++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 152 ~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (258)
T PRK13548 152 LWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLT 230 (258)
T ss_pred ccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhC
Confidence 5999999999999999999999999999874 48999999999999875 99999999999999999988764
No 444
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=5.4e-38 Score=354.62 Aligned_cols=208 Identities=29% Similarity=0.480 Sum_probs=173.1
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHH---HHhc
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVK---WLRT 749 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~---~lr~ 749 (1560)
|+++|++++|+. +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999942 24689999999999999999999999999999999999999999999999999776543 3678
Q ss_pred cEEEEecCCcCc-cccHHHHHhcCCC--CCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHh
Q 000406 750 QIGMVGQEPILF-ATSILENVLMGKE--NATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAM 826 (1560)
Q Consensus 750 ~i~~v~Q~~~lf-~~Tv~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl 826 (1560)
.++|++|++.++ ..|++||+.++.. ....++..+.+ .+.++.+ |+.........+||||||||++|||||
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRV-----SAALDKV--GLLDKAKNFPIQLSGGEQQRVGIARAV 152 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHH-----HHHHHHc--CChhhhhCCchhCCHHHHHHHHHHHHH
Confidence 899999999875 4699999987531 12222222111 1233333 444445666789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEE
Q 000406 827 IKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVE 889 (1560)
Q Consensus 827 ~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~ 889 (1560)
+.+|++|||||||++||+.+.+.+.+.|+++. ++.|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 153 VNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999999999874 47999999999999976 99999999999864
No 445
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.3e-38 Score=355.61 Aligned_cols=205 Identities=33% Similarity=0.560 Sum_probs=170.0
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHH---HHhc
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVK---WLRT 749 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~---~lr~ 749 (1560)
|+++|++++|+. +..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++.. .+++
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 789999999952 24699999999999999999999999999999999999999999999999999876532 4677
Q ss_pred cEEEEecCCcCcc-ccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHh
Q 000406 750 QIGMVGQEPILFA-TSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAM 826 (1560)
Q Consensus 750 ~i~~v~Q~~~lf~-~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl 826 (1560)
.++|++|++.+|. .|++||+.++... ...+...+ .+.+.++.+ |+.........+||||||||++|||||
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al 152 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQR-----RVGAALRQV--GLEHKADAFPEQLSGGEQQRVAIARAI 152 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHH
Confidence 8999999999986 5999999875211 11111111 112233333 343344555678999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCe
Q 000406 827 IKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGS 886 (1560)
Q Consensus 827 ~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~ 886 (1560)
+.+|++|||||||++||+.++..+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 153 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 153 VNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred hCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999874 58999999999999876 99999999985
No 446
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-38 Score=363.89 Aligned_cols=217 Identities=27% Similarity=0.465 Sum_probs=182.1
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC-----CCccEEEECCeecCC--ccH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD-----PTKGLITLDGHDLKS--LQV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~-----~~~G~I~i~g~~i~~--~~~ 744 (1560)
.|+++||+++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|++. |++|+|.++|.++.. .+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 4899999999963 358999999999999999999999999999999999986 479999999998853 345
Q ss_pred HHHhccEEEEecCCcCccccHHHHHhcCCCCC--C---HHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHH
Q 000406 745 KWLRTQIGMVGQEPILFATSILENVLMGKENA--T---MKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQR 819 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~--~---~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQR 819 (1560)
..++++|+||+|++.+|+.|+.||+.++.... . .+++.++++..++.+++ ....+..+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEV-------KDKLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhH-------HHHhcCCcccCCHHHHHH
Confidence 56788899999999999889999998764211 1 11222233333333222 223456678999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEe---------CCeEEE
Q 000406 820 IALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLD---------QGSVVE 889 (1560)
Q Consensus 820 ialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~---------~G~iv~ 889 (1560)
++|||||+++|+||||||||++||+.+...+.+.|+++.+++|||++||+++.+.. ||+|++|+ +|++++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999988767899999999999876 99999998 899999
Q ss_pred ecChhhHhh
Q 000406 890 IGNHRQLLE 898 (1560)
Q Consensus 890 ~G~~~~l~~ 898 (1560)
.|+++++..
T Consensus 240 ~~~~~~~~~ 248 (264)
T PRK14243 240 FDRTEKIFN 248 (264)
T ss_pred eCCHHHHHh
Confidence 999999865
No 447
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.9e-38 Score=374.76 Aligned_cols=227 Identities=23% Similarity=0.392 Sum_probs=181.0
Q ss_pred cEEEEEEEEEcCCCCC-ccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC----CCccEEEECCeecCCccHHH
Q 000406 672 KIEFKGVTFAYPSRPE-TVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD----PTKGLITLDGHDLKSLQVKW 746 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~-~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~----~~~G~I~i~g~~i~~~~~~~ 746 (1560)
-|+++|+++.|+.... ..+|+||||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++..++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 3799999999975322 359999999999999999999999999999999999997 48999999999998887655
Q ss_pred Hh----ccEEEEecCCc--Cccc-cHHHHHhcCCC---CCCHHHHHHHHHHhhhHHHHHhCCCCCC---cccCCCCCCCC
Q 000406 747 LR----TQIGMVGQEPI--LFAT-SILENVLMGKE---NATMKEAVAACKAASAHSFISELPLGYD---TQVGDRGTQLS 813 (1560)
Q Consensus 747 lr----~~i~~v~Q~~~--lf~~-Tv~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~gl~---t~~~~~g~~LS 813 (1560)
++ +.|+||||+|. +.+. |+.+++..... ....++.. ..+.+.++.+ |++ ..++..+.+||
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~-----~~~~~~L~~~--gL~~~~~~l~~~p~~LS 155 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRR-----QRAIDLLNQV--GIPDPASRLDVYPHQLS 155 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHC--CCCChHHHHhCCchhCC
Confidence 43 36999999994 4443 77666543210 11111111 1122334443 342 34567788999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEe
Q 000406 814 GGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEI 890 (1560)
Q Consensus 814 gGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~ 890 (1560)
|||||||+|||||+.+|+|||+||||++||+.++..+.+.|+++. .|.|+|+|||+++.+.. ||+|+||++|+|+|.
T Consensus 156 gGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive~ 235 (326)
T PRK11022 156 GGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVET 235 (326)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEE
Confidence 999999999999999999999999999999999999999999874 48999999999999865 999999999999999
Q ss_pred cChhhHhhhc-chHHH
Q 000406 891 GNHRQLLERG-GAYHD 905 (1560)
Q Consensus 891 G~~~~l~~~~-~~~~~ 905 (1560)
|++++++++. ..|.+
T Consensus 236 g~~~~~~~~p~hpyt~ 251 (326)
T PRK11022 236 GKAHDIFRAPRHPYTQ 251 (326)
T ss_pred CCHHHHhhCCCChHHH
Confidence 9999998643 34443
No 448
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-38 Score=355.68 Aligned_cols=205 Identities=25% Similarity=0.477 Sum_probs=173.2
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++|+++.|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|+++.. ..+++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 478999999963 458999999999999999999999999999999999999999999999987753 4567899
Q ss_pred EEecCCcCccc-cHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccC
Q 000406 753 MVGQEPILFAT-SILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKD 829 (1560)
Q Consensus 753 ~v~Q~~~lf~~-Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~ 829 (1560)
|++|++.++.. |++||+.++... ....+. ...+.++++.+ |++........+||||||||++|||||+.+
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEA-----RRRIDEWLERL--ELSEYANKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHH-----HHHHHHHHHHc--CChHHHhCcHhhCCHHHHHHHHHHHHHhcC
Confidence 99999999875 999999874211 111111 11233445554 555666677789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEec
Q 000406 830 PRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIG 891 (1560)
Q Consensus 830 p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G 891 (1560)
|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999998874 57899999999999865 9999999999998754
No 449
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-38 Score=364.38 Aligned_cols=216 Identities=32% Similarity=0.525 Sum_probs=179.2
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC-----CCccEEEECCeecCCcc--HH
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD-----PTKGLITLDGHDLKSLQ--VK 745 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~-----~~~G~I~i~g~~i~~~~--~~ 745 (1560)
-+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|+++...+ ..
T Consensus 6 ~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 468999999963 468999999999999999999999999999999999986 47999999999886543 33
Q ss_pred HHhccEEEEecCCcCccccHHHHHhcCCC--CC--CHHHHHHHHHHhhhHHHHHhCCCCCC----cccCCCCCCCChHHH
Q 000406 746 WLRTQIGMVGQEPILFATSILENVLMGKE--NA--TMKEAVAACKAASAHSFISELPLGYD----TQVGDRGTQLSGGQK 817 (1560)
Q Consensus 746 ~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~--~~--~~~~~~~~~~~~~~~~~i~~l~~gl~----t~~~~~g~~LSgGQr 817 (1560)
.+|+.++||+|++.+|+.|++||+.++.. .. ..++..+ .+.+.++.+ |+. +.++..+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDE-----IVEKSLTSV--GLWEELGDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHH-----HHHHHHHHc--CCCchhhhHhhcChhhCCHHHH
Confidence 56788999999999999999999987521 10 1111111 112223333 332 245567789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 818 QRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 818 QRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
||++|||||+++|+||||||||++||+.+++.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999875 999999999999999999887
Q ss_pred hh
Q 000406 897 LE 898 (1560)
Q Consensus 897 ~~ 898 (1560)
..
T Consensus 236 ~~ 237 (251)
T PRK14244 236 FK 237 (251)
T ss_pred hc
Confidence 64
No 450
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.9e-38 Score=367.61 Aligned_cols=213 Identities=30% Similarity=0.493 Sum_probs=186.7
Q ss_pred cEEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhce
Q 000406 1313 GIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQT 1392 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I 1392 (1560)
.++++||+.+|.. ...+|+||||+|++||.+|++||||||||||+++|+|++.|++|+|.++|.|...- ...+|++|
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4789999999962 24699999999999999999999999999999999999999999999999998765 77889999
Q ss_pred EEEcCCCCCCCc-cHHHHHhcCC-----C-CCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHH
Q 000406 1393 ALVGQEPALFAG-TIRDNIALGN-----P-KASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIAR 1465 (1560)
Q Consensus 1393 ~~VpQdp~LF~g-TIreNL~~g~-----~-~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLAR 1465 (1560)
|||||+|.+++. |++|||.+.. + ...++.+.+.++..+|.+.- +.+ ...||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-------~~~----~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-------NKK----VRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-------Ccc----hhhcCHHHHHHHHHHH
Confidence 999999998865 9999998742 1 12245677787777775411 223 3469999999999999
Q ss_pred HHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC-C-ceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1466 AILKGSRVLLLDEASSALDLESEKHVQDALRKVSK-R-ATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1466 ALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~-~-~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
||+.+|+||||||||++||+.+...+.+.|+++.+ + +|||++||.++.+.. ||+|++|++|+++..|+++++..
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~ 226 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKE 226 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999875 4 699999999999988 99999999999999999999875
No 451
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=7.2e-38 Score=352.62 Aligned_cols=210 Identities=29% Similarity=0.454 Sum_probs=182.9
Q ss_pred EEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccH----HHHhc
Q 000406 674 EFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQV----KWLRT 749 (1560)
Q Consensus 674 ~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~----~~lr~ 749 (1560)
.+.|+.|+|+.. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 578999999743 468999999999999999999999999999999999999999999999998865532 23567
Q ss_pred cEEEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccC
Q 000406 750 QIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKD 829 (1560)
Q Consensus 750 ~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~ 829 (1560)
.++|++|++.+|+.|++||+.++.+. ..++..++++..++.+.+..+|.|+++.++..+.+||||||||++||||++.+
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPF-NKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcC-CHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 79999999999988999999986532 34445566677777778888899999988888999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHH--HHHHhc-CCcEEEEEecCccccccCCEEEEEeCCe
Q 000406 830 PRILLLDEPTSALDSESESIVQQ--AIDKIS-VGRTTIVIAHRLATVKNANTIVVLDQGS 886 (1560)
Q Consensus 830 p~illLDEpts~LD~~~~~~i~~--~l~~~~-~~~tvi~itH~l~~i~~~D~i~vl~~G~ 886 (1560)
|++|||||||++||+.+...+.+ .++.+. .+.|+|++||+++.+..||++++|++|+
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999988887 555543 4799999999999988899999999884
No 452
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-38 Score=366.12 Aligned_cols=217 Identities=29% Similarity=0.514 Sum_probs=181.2
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCC--ccHHHHhcc
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKS--LQVKWLRTQ 750 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~--~~~~~lr~~ 750 (1560)
|+++||+++|+. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++.. .+...+++.
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 789999999963 2358999999999999999999999999999999999999999999999999852 234457789
Q ss_pred EEEEecCC--cCccccHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHh
Q 000406 751 IGMVGQEP--ILFATSILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAM 826 (1560)
Q Consensus 751 i~~v~Q~~--~lf~~Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl 826 (1560)
|+|++|++ .++..|+.|||.++... ...++..+ .+.+.++.+ |+.......+.+||||||||++|||||
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LS~Gq~qrv~laral 152 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEK-----RVKEALKAV--GMEGFENKPPHHLSGGQKKRVAIAGIL 152 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchhhcCChhhCCHHHHHHHHHHHHH
Confidence 99999997 47788999999875321 12222111 112233333 444445566789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 827 IKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 827 ~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
+.+|++|||||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|++++++.
T Consensus 153 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (275)
T PRK13639 153 AMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFS 226 (275)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999874 48999999999999875 99999999999999999998865
No 453
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=8.1e-38 Score=362.64 Aligned_cols=229 Identities=28% Similarity=0.410 Sum_probs=186.0
Q ss_pred EEEEEEEEEcCCC------CCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCH--
Q 000406 1314 IELKMVTFTYPSR------PEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINV-- 1385 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~------~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l-- 1385 (1560)
|+++||++.|+.. .++++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++..++.
T Consensus 4 l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~~ 83 (268)
T PRK10419 4 LNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRAQ 83 (268)
T ss_pred EEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChhH
Confidence 8899999999631 02469999999999999999999999999999999999999999999999999988765
Q ss_pred -HHHhhceEEEcCCCC--CC-CccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccc-cccCCCCCCChHHHHH
Q 000406 1386 -KWLRKQTALVGQEPA--LF-AGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYET-QVGESGVQLSGGQKQR 1460 (1560)
Q Consensus 1386 -~~LR~~I~~VpQdp~--LF-~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt-~Vge~G~~LSGGQrQR 1460 (1560)
..+|+.++|+||++. ++ ..|+++|+.+...... .+........+.+.+..+ |+++ ........||||||||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~--~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~Ge~qr 159 (268)
T PRK10419 84 RKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLL--SLDKAERLARASEMLRAV--DLDDSVLDKRPPQLSGGQLQR 159 (268)
T ss_pred HHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhc--cCCHHHHHHHHHHHHHHc--CCChhHhhCCCccCChHHHHH
Confidence 346889999999983 43 4699999864210000 001111222344555554 5653 4456677899999999
Q ss_pred HHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHH
Q 000406 1461 IAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1461 LaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eL 1537 (1560)
++|||||+.+|+||||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 160 l~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 239 (268)
T PRK10419 160 VCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQPVGDK 239 (268)
T ss_pred HHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCChhhc
Confidence 9999999999999999999999999999999999998753 7899999999999975 999999999999999999999
Q ss_pred HhhccChHHHH
Q 000406 1538 LASHLNGVYAS 1548 (1560)
Q Consensus 1538 l~~~~~g~y~~ 1548 (1560)
.. .+..|..
T Consensus 240 ~~--~~~~~~~ 248 (268)
T PRK10419 240 LT--FSSPAGR 248 (268)
T ss_pred cC--CCCHHHH
Confidence 86 3444433
No 454
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=2.7e-38 Score=375.30 Aligned_cols=228 Identities=25% Similarity=0.427 Sum_probs=183.0
Q ss_pred cEEEEEEEEEcCCC-CCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCC---ccEEEECCeecCCccHHHH
Q 000406 672 KIEFKGVTFAYPSR-PETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPT---KGLITLDGHDLKSLQVKWL 747 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~-~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~---~G~I~i~g~~i~~~~~~~l 747 (1560)
.|+++|+++.|+.. ....+|+||||+|++||+++|+|+||||||||+++|+|+++|. +|+|.++|.++..++...+
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 58999999999642 2246899999999999999999999999999999999999996 9999999999988876654
Q ss_pred ---h-ccEEEEecCC--cCccc-cHHHHHhcCC---CCCCHHHHHHHHHHhhhHHHHHh--CCCCCCcccCCCCCCCChH
Q 000406 748 ---R-TQIGMVGQEP--ILFAT-SILENVLMGK---ENATMKEAVAACKAASAHSFISE--LPLGYDTQVGDRGTQLSGG 815 (1560)
Q Consensus 748 ---r-~~i~~v~Q~~--~lf~~-Tv~eNi~~g~---~~~~~~~~~~~~~~~~~~~~i~~--l~~gl~t~~~~~g~~LSgG 815 (1560)
| ++|+||+|+| .+++. |+.+|+.... ...+.++..+. +.+.++. ++.+. ..++..+.+||||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~-----~~~~L~~vgL~~~~-~~~~~~p~~LSgG 165 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEE-----SVRMLDAVKMPEAR-KRMKMYPHEFSGG 165 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHcCCCChH-HHhcCCcccCCHH
Confidence 3 4799999998 45553 8888775321 11122222111 1122222 22221 2356788899999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCcccccc-CCEEEEEeCCeEEEecC
Q 000406 816 QKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISV--GRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGN 892 (1560)
Q Consensus 816 QrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~ 892 (1560)
||||++|||||+.+|++||+||||++||+.++..+.+.|+++.+ |.|+|+|||+++.+.. ||+|+||++|+|+|.|+
T Consensus 166 ~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~g~ 245 (330)
T PRK09473 166 MRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEYGN 245 (330)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999998743 8999999999999875 99999999999999999
Q ss_pred hhhHhhhc-chHHH
Q 000406 893 HRQLLERG-GAYHD 905 (1560)
Q Consensus 893 ~~~l~~~~-~~~~~ 905 (1560)
++++.+.. ..|.+
T Consensus 246 ~~~i~~~p~~pyt~ 259 (330)
T PRK09473 246 ARDVFYQPSHPYSI 259 (330)
T ss_pred HHHHHhCCCCHHHH
Confidence 99998642 34544
No 455
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-38 Score=365.30 Aligned_cols=220 Identities=27% Similarity=0.438 Sum_probs=182.1
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC-----CCccEEEECCeecCC--ccH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD-----PTKGLITLDGHDLKS--LQV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~-----~~~G~I~i~g~~i~~--~~~ 744 (1560)
.|+++|++++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 5999999999963 358999999999999999999999999999999999987 699999999999853 345
Q ss_pred HHHhccEEEEecCCcCccccHHHHHhcCCC--CCCHHHHHHHHHHhhhHHHHHhCC--CCCCcccCCCCCCCChHHHHHH
Q 000406 745 KWLRTQIGMVGQEPILFATSILENVLMGKE--NATMKEAVAACKAASAHSFISELP--LGYDTQVGDRGTQLSGGQKQRI 820 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~--~gl~t~~~~~g~~LSgGQrQRi 820 (1560)
..+++.++|++|++.+|..|++||+.++.. ....++..+. .+.+.+..+. .++....+..+.+||||||||+
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~----~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qrv 176 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDE----IVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQRL 176 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHH----HHHHHHHHcCCcchHHHHHhcCcccCCHHHHHHH
Confidence 567788999999999998999999987531 1111111110 0111122211 1333445677889999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 821 ALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 821 alARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
+|||||+.+|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 177 ~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~ 255 (271)
T PRK14238 177 CIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIFS 255 (271)
T ss_pred HHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 9999999999999999999999999999999999988778999999999999865 99999999999999999988864
No 456
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-38 Score=361.16 Aligned_cols=202 Identities=26% Similarity=0.380 Sum_probs=170.5
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++... ++.++
T Consensus 2 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~ 73 (255)
T PRK11248 2 LQISHLYADYGG---KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERG 73 (255)
T ss_pred EEEEEEEEEeCC---eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEE
Confidence 789999999963 3599999999999999999999999999999999999999999999999998642 24689
Q ss_pred EEcCCCCCCC-ccHHHHHhcCCC--CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000406 1394 LVGQEPALFA-GTIRDNIALGNP--KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARA 1466 (1560)
Q Consensus 1394 ~VpQdp~LF~-gTIreNL~~g~~--~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARA 1466 (1560)
|+||++.+|. .|++||+.++.. .... +++.++++..++.+ .......+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LSgGq~qrl~lara 142 (255)
T PRK11248 74 VVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEG-----------AEKRYIWQLSGGQRQRVGIARA 142 (255)
T ss_pred EEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChh-----------HhhCChhhCCHHHHHHHHHHHH
Confidence 9999999887 699999986421 1122 23444444444433 2334456899999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhc--CCceEEEEecChHHHhh-cCEEEEEe--CCEEEEecCH
Q 000406 1467 ILKGSRVLLLDEASSALDLESEKHVQDALRKVS--KRATTIVVAHRLSTIRE-ANMIAVVR--DGAVVEYGSH 1534 (1560)
Q Consensus 1467 LLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~--~~~TvI~IAHRlsti~~-aDrIlVLd--~G~IvE~Gt~ 1534 (1560)
|+.+|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|+ +|+|++.++.
T Consensus 143 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 143 LAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999999999999999999999863 37899999999999866 99999998 5999998754
No 457
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-38 Score=361.80 Aligned_cols=217 Identities=30% Similarity=0.516 Sum_probs=180.4
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC-----CccEEEECCeecCCc--cH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP-----TKGLITLDGHDLKSL--QV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~-----~~G~I~i~g~~i~~~--~~ 744 (1560)
.|+++|+++.|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 4899999999963 4589999999999999999999999999999999999974 899999999988653 23
Q ss_pred HHHhccEEEEecCCcCccccHHHHHhcCCCC---CCHHH----HHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHH
Q 000406 745 KWLRTQIGMVGQEPILFATSILENVLMGKEN---ATMKE----AVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQK 817 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~---~~~~~----~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQr 817 (1560)
..+++.++|++|++.+|..|++||+.++... ...++ +.++++..++.+. ++...+..+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDE-------VKSELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCch-------hHHHHhCChhhcCHHHH
Confidence 4567889999999999999999999875311 11111 2222222222111 12335667789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 818 QRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 818 QRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
||++|||||+++|+||||||||++||+.++..+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999999999988768999999999998765 999999999999999999887
Q ss_pred hh
Q 000406 897 LE 898 (1560)
Q Consensus 897 ~~ 898 (1560)
.+
T Consensus 233 ~~ 234 (250)
T PRK14262 233 VE 234 (250)
T ss_pred Hh
Confidence 64
No 458
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=5.8e-38 Score=355.90 Aligned_cols=212 Identities=29% Similarity=0.459 Sum_probs=174.9
Q ss_pred cEEEEEEEEEcCCCCC-ccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHH---H
Q 000406 672 KIEFKGVTFAYPSRPE-TVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKW---L 747 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~-~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~---l 747 (1560)
.|+++|++++|+.... .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++...+... .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 5899999999974221 25899999999999999999999999999999999999999999999999998776543 2
Q ss_pred -hccEEEEecCCcCccc-cHHHHHhcCCC--CCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHH
Q 000406 748 -RTQIGMVGQEPILFAT-SILENVLMGKE--NATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALA 823 (1560)
Q Consensus 748 -r~~i~~v~Q~~~lf~~-Tv~eNi~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialA 823 (1560)
++.++|++|++.++.. |++||+.++.. .....+. ...+.+.++.+ |+...+.....+||||||||++||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrl~la 158 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQS-----RNGAKALLEQL--GLGKRLDHLPAQLSGGEQQRVALA 158 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHH
Confidence 3579999999999875 99999986421 1111111 11222334444 444445566779999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCccccccCCEEEEEeCCeEEEe
Q 000406 824 RAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKNANTIVVLDQGSVVEI 890 (1560)
Q Consensus 824 RAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~~D~i~vl~~G~iv~~ 890 (1560)
|||+.+|++|||||||++||+.+...+.+.|+++. .++|||++||+++.+..||++++|++|++++.
T Consensus 159 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 159 RAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 99999999999999999999999999999998873 37899999999998877999999999999764
No 459
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-38 Score=361.76 Aligned_cols=219 Identities=29% Similarity=0.441 Sum_probs=181.5
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC-----CccEEEECCeecCCc--cH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP-----TKGLITLDGHDLKSL--QV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~-----~~G~I~i~g~~i~~~--~~ 744 (1560)
.|+++|++++|++ +.+|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|+++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 4899999999963 4589999999999999999999999999999999999763 489999999998765 44
Q ss_pred HHHhccEEEEecCCcCccccHHHHHhcCCCCC---CHHHHHHHHHHhhhHHHHHhC--CCCCCcccCCCCCCCChHHHHH
Q 000406 745 KWLRTQIGMVGQEPILFATSILENVLMGKENA---TMKEAVAACKAASAHSFISEL--PLGYDTQVGDRGTQLSGGQKQR 819 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~---~~~~~~~~~~~~~~~~~i~~l--~~gl~t~~~~~g~~LSgGQrQR 819 (1560)
...++.|+|++|++.+|+.||+||+.++.... ...+..+. +.+.++.+ ..++.+..+..+.+||||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qr 157 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTI-----VEKSLKGAALWDEVKDRLHDSALSLSGGQQQR 157 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHH-----HHHHHHHhcCchhhHHHhhcChhhCCHHHHHH
Confidence 56678899999999999899999998763211 11111111 11122222 1123344667788999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 820 IALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 820 ialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 158 v~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 237 (253)
T PRK14261 158 LCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIFE 237 (253)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHHh
Confidence 99999999999999999999999999999999999988667999999999999975 99999999999999999988754
No 460
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=4.6e-38 Score=362.83 Aligned_cols=221 Identities=26% Similarity=0.436 Sum_probs=183.3
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++|+++.|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 789999999963 46999999999999999999999999999999999999999999999999998887777788899
Q ss_pred EEecCCcCc-cccHHHHHhcCCCCCCH-HHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCC
Q 000406 753 MVGQEPILF-ATSILENVLMGKENATM-KEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDP 830 (1560)
Q Consensus 753 ~v~Q~~~lf-~~Tv~eNi~~g~~~~~~-~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p 830 (1560)
|++|++.++ ..||+||+.++...... ...........+.+.+..+ |+.......+.+||||||||++|||||+.+|
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p 156 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALART--ELSHLADRDMSTLSGGERQRVHVARALAQEP 156 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 999998654 56999999886321000 0000000111223344444 4444556677899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 831 RILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 831 ~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
++|||||||++||+.+...+.+.|+++. ++.|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 157 KLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred CEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999874 47899999999999965 99999999999999999888754
No 461
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=4.2e-38 Score=341.36 Aligned_cols=172 Identities=45% Similarity=0.727 Sum_probs=160.9
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++|++++|+.. ..++|+++||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...++++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 5789999999742 245899999999999999999999999999999999999999999999999998888878888999
Q ss_pred EEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCCCE
Q 000406 753 MVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRI 832 (1560)
Q Consensus 753 ~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~i 832 (1560)
|++|++.+|+.|++||+ ||||||||++|||||+.+|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999997 999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCccccccCCEEEEEeCCeE
Q 000406 833 LLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKNANTIVVLDQGSV 887 (1560)
Q Consensus 833 llLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~~D~i~vl~~G~i 887 (1560)
|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+..||+|++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999998874 48999999999998877999999999974
No 462
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=5.3e-38 Score=355.17 Aligned_cols=213 Identities=24% Similarity=0.413 Sum_probs=179.9
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccE
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQI 751 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i 751 (1560)
.|+++|+++.|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.+
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 5899999999963 4599999999999999999999999999999999999999999999999999887777778899
Q ss_pred EEEecCCcCccccHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCC-cccCCCCCCCChHHHHHHHHHHHhccCC
Q 000406 752 GMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYD-TQVGDRGTQLSGGQKQRIALARAMIKDP 830 (1560)
Q Consensus 752 ~~v~Q~~~lf~~Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~-t~~~~~g~~LSgGQrQRialARAl~~~p 830 (1560)
+|++|++.+|+.|++||+.++.......... ..+.+.++.+ |+. +..+..+.+||||||||++|||||+++|
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral~~~p 156 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDP-----AIFLDDLERF--ALPDTILTKNIAELSGGEKQRISLIRNLQFMP 156 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHH-----HHHHHHHHHc--CCChHHhcCCcccCCHHHHHHHHHHHHHhcCC
Confidence 9999999999889999998642100000000 1122344554 453 4567778899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCccccccCCEEEEEe-CCeEEEecChh
Q 000406 831 RILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKNANTIVVLD-QGSVVEIGNHR 894 (1560)
Q Consensus 831 ~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~~D~i~vl~-~G~iv~~G~~~ 894 (1560)
++|||||||++||+.+...+.+.|+++. .++|+|++||+++.+..||+|++|+ ++..+++|+|+
T Consensus 157 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 157 KVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999874 3889999999999998899999995 67777778775
No 463
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=4.9e-38 Score=352.73 Aligned_cols=205 Identities=32% Similarity=0.565 Sum_probs=173.0
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCC--ccHHHHhcc
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKS--LQVKWLRTQ 750 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~--~~~~~lr~~ 750 (1560)
|+++|++++|++ .++|+++||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.++.. .+...+++.
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 478999999964 458999999999999999999999999999999999999999999999998853 344567789
Q ss_pred EEEEecCCcCcc-ccHHHHHhcCCC---CCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHh
Q 000406 751 IGMVGQEPILFA-TSILENVLMGKE---NATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAM 826 (1560)
Q Consensus 751 i~~v~Q~~~lf~-~Tv~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl 826 (1560)
|+|++|++.+|+ .|++||+.++.. ....++..+ .+.+.++.+ |++..+.....+||||||||++|||||
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al 150 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEE-----RALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 150 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHhHhhhCccccCHHHHHHHHHHHHH
Confidence 999999999987 599999987531 111221111 123344444 555666777789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeE
Q 000406 827 IKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSV 887 (1560)
Q Consensus 827 ~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~i 887 (1560)
+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++
T Consensus 151 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 151 AMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999874 48999999999999975 999999999974
No 464
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.3e-38 Score=360.68 Aligned_cols=217 Identities=30% Similarity=0.451 Sum_probs=181.1
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC-----CccEEEECCeecCCc--cH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP-----TKGLITLDGHDLKSL--QV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~-----~~G~I~i~g~~i~~~--~~ 744 (1560)
.|+++|+++.|+. ..+|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 5899999999963 4589999999999999999999999999999999999875 799999999998643 34
Q ss_pred HHHhccEEEEecCCcCccccHHHHHhcCCCCC---CHH----HHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHH
Q 000406 745 KWLRTQIGMVGQEPILFATSILENVLMGKENA---TMK----EAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQK 817 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~---~~~----~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQr 817 (1560)
..+++.++|+||++.+|+.|++||+.++.... ... ++.++++..++.+ ++....+..+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWD-------EVKDDLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCch-------hhhhHhhCCcccCCHHHH
Confidence 46678899999999999999999998753211 111 1122222222211 222334567789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 818 QRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 818 QRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
||++||||++.+|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988667999999999999876 999999999999999999987
Q ss_pred hh
Q 000406 897 LE 898 (1560)
Q Consensus 897 ~~ 898 (1560)
..
T Consensus 234 ~~ 235 (251)
T PRK14270 234 FL 235 (251)
T ss_pred hc
Confidence 64
No 465
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-38 Score=362.39 Aligned_cols=218 Identities=30% Similarity=0.479 Sum_probs=181.9
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC-----CccEEEECCeecCC--cc
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP-----TKGLITLDGHDLKS--LQ 743 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~-----~~G~I~i~g~~i~~--~~ 743 (1560)
+.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.. ..
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 36999999999963 4589999999999999999999999999999999999985 48999999998854 34
Q ss_pred HHHHhccEEEEecCCcCccccHHHHHhcCCCC---CCH----HHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHH
Q 000406 744 VKWLRTQIGMVGQEPILFATSILENVLMGKEN---ATM----KEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQ 816 (1560)
Q Consensus 744 ~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~---~~~----~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQ 816 (1560)
...++.+|+||+|++.+|+.|++||+.++... ... +.+.++++..++.+++ ....+..+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEV-------KDKLNKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchh-------hhHhcCCcccCCHHH
Confidence 45677889999999999999999999875311 111 1222333333332221 223456678999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEe-----CCeEEEe
Q 000406 817 KQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLD-----QGSVVEI 890 (1560)
Q Consensus 817 rQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~-----~G~iv~~ 890 (1560)
|||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|+ +|++++.
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 99999999999999999999999999999999999999988767999999999999876 99999997 5999999
Q ss_pred cChhhHhh
Q 000406 891 GNHRQLLE 898 (1560)
Q Consensus 891 G~~~~l~~ 898 (1560)
|+++++.+
T Consensus 236 ~~~~~~~~ 243 (259)
T PRK14260 236 GVTTQIFS 243 (259)
T ss_pred CCHHHHhc
Confidence 99998864
No 466
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-38 Score=360.66 Aligned_cols=217 Identities=30% Similarity=0.512 Sum_probs=181.4
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC-----CccEEEECCeecC-CccHH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP-----TKGLITLDGHDLK-SLQVK 745 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~-----~~G~I~i~g~~i~-~~~~~ 745 (1560)
.|+++|+++.|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4889999999963 4589999999999999999999999999999999999986 5999999999885 34556
Q ss_pred HHhccEEEEecCCcCccccHHHHHhcCCCC--CC-HH----HHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHH
Q 000406 746 WLRTQIGMVGQEPILFATSILENVLMGKEN--AT-MK----EAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQ 818 (1560)
Q Consensus 746 ~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~--~~-~~----~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQ 818 (1560)
.+|+.++|++|++.+|+.|++||+.++... .. .+ ++.++++..++.+ ++...++..+.+|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWD-------EVKDRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCch-------hhhHHhhcCcccCCHHHHH
Confidence 778889999999999989999999875321 11 11 1122222222211 1223456667899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHh
Q 000406 819 RIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLL 897 (1560)
Q Consensus 819 RialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~ 897 (1560)
|++|||||+.+|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||++++|++|++++.|+++++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998767999999999999876 9999999999999999988775
Q ss_pred h
Q 000406 898 E 898 (1560)
Q Consensus 898 ~ 898 (1560)
.
T Consensus 233 ~ 233 (249)
T PRK14253 233 S 233 (249)
T ss_pred c
Confidence 3
No 467
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=2.3e-38 Score=355.30 Aligned_cols=202 Identities=32% Similarity=0.516 Sum_probs=166.2
Q ss_pred EEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEEE
Q 000406 674 EFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIGM 753 (1560)
Q Consensus 674 ~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~~ 753 (1560)
+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++. .++++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999963 45899999999999999999999999999999999999999999999998764 35678999
Q ss_pred EecCCcC---ccccHHHHHhcCCCCC------CHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHH
Q 000406 754 VGQEPIL---FATSILENVLMGKENA------TMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALAR 824 (1560)
Q Consensus 754 v~Q~~~l---f~~Tv~eNi~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialAR 824 (1560)
|+|++.+ ++.|++||+.++.... ..++. ...+.+.++.+ |++........+||||||||++|||
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~ 145 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKAD-----KAKVDEALERV--GLSELADRQIGELSGGQQQRVLLAR 145 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHH-----HHHHHHHHHHc--CCHHHHhCCcccCCHHHHHHHHHHH
Confidence 9999876 5579999998764311 00111 11122334433 4444455667799999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEec
Q 000406 825 AMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIG 891 (1560)
Q Consensus 825 Al~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G 891 (1560)
||+.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 146 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 146 ALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999998874 68999999999999876 9999999886 55543
No 468
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=7.9e-38 Score=352.71 Aligned_cols=204 Identities=29% Similarity=0.436 Sum_probs=173.0
Q ss_pred EEEEEEEEEcCCCC-CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHH---HHh
Q 000406 1314 IELKMVTFTYPSRP-EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVK---WLR 1389 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~-~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~---~LR 1389 (1560)
++++||++.|+... ...+|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996421 24699999999999999999999999999999999999999999999999999877653 468
Q ss_pred hceEEEcCCCCCCC-ccHHHHHhcCCC---CCCHH----HHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHH
Q 000406 1390 KQTALVGQEPALFA-GTIRDNIALGNP---KASWA----EIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRI 1461 (1560)
Q Consensus 1390 ~~I~~VpQdp~LF~-gTIreNL~~g~~---~~sd~----eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRL 1461 (1560)
+.++|+||++.+|. .|+.||+.++.. ..+.+ ++.++++..++.+++ ......||+|||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~lS~G~~qrv 150 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHL-----------DYYPHNLSGGQKQRV 150 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhh-----------hcChhhCCHHHHHHH
Confidence 89999999999987 699999986421 12222 344444444444433 334457999999999
Q ss_pred HHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhhcCEEEEEeCCEE
Q 000406 1462 AIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIREANMIAVVRDGAV 1528 (1560)
Q Consensus 1462 aLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~aDrIlVLd~G~I 1528 (1560)
+|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+..||+|++|++|++
T Consensus 151 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 151 AIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 999999999999999999999999999999999998753 7999999999998777999999999986
No 469
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=9e-38 Score=375.31 Aligned_cols=207 Identities=30% Similarity=0.436 Sum_probs=175.8
Q ss_pred EEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCC----HHHHhhceE
Q 000406 1318 MVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREIN----VKWLRKQTA 1393 (1560)
Q Consensus 1318 nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~----l~~LR~~I~ 1393 (1560)
||+++|++ . .+ |+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+ ...+|+.++
T Consensus 4 ~l~~~~~~---~-~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~ 78 (354)
T TIGR02142 4 RFSKRLGD---F-SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIG 78 (354)
T ss_pred EEEEEECC---E-EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeE
Confidence 88999953 2 35 999999999999999999999999999999999999999999999987543 345688999
Q ss_pred EEcCCCCCCCc-cHHHHHhcCCCCCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHc
Q 000406 1394 LVGQEPALFAG-TIRDNIALGNPKASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAIL 1468 (1560)
Q Consensus 1394 ~VpQdp~LF~g-TIreNL~~g~~~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALL 1468 (1560)
||||++.+|.. |++||+.++...... +++.++++..++ +.........||||||||++|||||+
T Consensus 79 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL-----------~~~~~~~~~~LSgGqkqRvalAraL~ 147 (354)
T TIGR02142 79 YVFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGI-----------GHLLGRLPGRLSGGEKQRVAIGRALL 147 (354)
T ss_pred EEecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCC-----------hhHhcCChhhCCHHHHHHHHHHHHHH
Confidence 99999999975 999999876332221 224444444444 33344445689999999999999999
Q ss_pred cCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHhh
Q 000406 1469 KGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLAS 1540 (1560)
Q Consensus 1469 r~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~~ 1540 (1560)
.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 148 ~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (354)
T TIGR02142 148 SSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWAS 222 (354)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcC
Confidence 99999999999999999999999999998754 6899999999999876 999999999999999999999873
No 470
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-38 Score=364.27 Aligned_cols=220 Identities=29% Similarity=0.476 Sum_probs=183.7
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC-----CccEEEECCeecCCcc-HH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP-----TKGLITLDGHDLKSLQ-VK 745 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~-----~~G~I~i~g~~i~~~~-~~ 745 (1560)
.|+++||+++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++...+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 5899999999973 4689999999999999999999999999999999999986 6999999999987653 34
Q ss_pred HHhccEEEEecCCcCccccHHHHHhcCCCC---CCHHHHHHHHHHhhhHHHHHhC--CCCCCcccCCCCCCCChHHHHHH
Q 000406 746 WLRTQIGMVGQEPILFATSILENVLMGKEN---ATMKEAVAACKAASAHSFISEL--PLGYDTQVGDRGTQLSGGQKQRI 820 (1560)
Q Consensus 746 ~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~---~~~~~~~~~~~~~~~~~~i~~l--~~gl~t~~~~~g~~LSgGQrQRi 820 (1560)
.++++|+|++|++.+|+.|++||+.++... .+.++....+ .+.++.+ ...+.+.++..+.+||||||||+
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl 172 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVA-----QARLTEVGLWDAVKDRLSDSPFRLSGGQQQLL 172 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHcCCCchhhhHhhCCcccCCHHHHHHH
Confidence 567889999999999999999999875321 1222222111 1223332 11122345677789999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 821 ALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 821 alARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
+|||||+.+|+||||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 173 ~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 252 (276)
T PRK14271 173 CLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSS 252 (276)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999988667899999999999876 999999999999999999988653
No 471
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-37 Score=363.55 Aligned_cols=218 Identities=30% Similarity=0.504 Sum_probs=180.0
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC-----CCccEEEECCeecCC--cc
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD-----PTKGLITLDGHDLKS--LQ 743 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~-----~~~G~I~i~g~~i~~--~~ 743 (1560)
..|+++|++++|+. ..+|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 38 ~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 35999999999963 459999999999999999999999999999999999997 689999999999864 34
Q ss_pred HHHHhccEEEEecCCcCccccHHHHHhcCCCC--CC---HHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHH
Q 000406 744 VKWLRTQIGMVGQEPILFATSILENVLMGKEN--AT---MKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQ 818 (1560)
Q Consensus 744 ~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~--~~---~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQ 818 (1560)
...++++++||+|++.+|+.|++||+.++... .. .+++.++++..++.. .+...++..+.+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~i~~~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWD-------EVKDQLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCc-------hhHHHHhCCcccCCHHHHH
Confidence 55678899999999999988999999875311 11 112222222222211 1122356677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEE-EEeCCeEEEecChhhH
Q 000406 819 RIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIV-VLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 819 RialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~-vl~~G~iv~~G~~~~l 896 (1560)
|++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. |||++ +|++|+|++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998666899999999999876 99975 6799999999998887
Q ss_pred hh
Q 000406 897 LE 898 (1560)
Q Consensus 897 ~~ 898 (1560)
..
T Consensus 268 ~~ 269 (285)
T PRK14254 268 FE 269 (285)
T ss_pred Hh
Confidence 54
No 472
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.7e-38 Score=359.87 Aligned_cols=220 Identities=31% Similarity=0.471 Sum_probs=180.1
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCC-----ccEEEECCeecCC--ccH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPT-----KGLITLDGHDLKS--LQV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~-----~G~I~i~g~~i~~--~~~ 744 (1560)
.|+++|++++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 4789999999963 46999999999999999999999999999999999999874 8999999999864 334
Q ss_pred HHHhccEEEEecCCcCccc-cHHHHHhcCCCC--C-CHHHHHHHHHHhhhHHHHHhCC--CCCCcccCCCCCCCChHHHH
Q 000406 745 KWLRTQIGMVGQEPILFAT-SILENVLMGKEN--A-TMKEAVAACKAASAHSFISELP--LGYDTQVGDRGTQLSGGQKQ 818 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~lf~~-Tv~eNi~~g~~~--~-~~~~~~~~~~~~~~~~~i~~l~--~gl~t~~~~~g~~LSgGQrQ 818 (1560)
..+|+.|+|++|++.+|.. |+.||+.++... . ..++..+.+. +.+..+. .++.......+.+|||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~-----~~l~~~~l~~~l~~~~~~~~~~LS~G~~q 155 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAE-----RSLRGAALWDEVKDRLKTPATGLSGGQQQ 155 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHH-----HHHHHcCcchhhhhhhcCCcccCCHHHHH
Confidence 5667889999999999885 999999864321 1 1222222211 1111110 11222334556789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHh
Q 000406 819 RIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLL 897 (1560)
Q Consensus 819 RialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~ 897 (1560)
|++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++++
T Consensus 156 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 156 RLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988668999999999999876 9999999999999999999886
Q ss_pred hh
Q 000406 898 ER 899 (1560)
Q Consensus 898 ~~ 899 (1560)
..
T Consensus 236 ~~ 237 (252)
T PRK14272 236 TN 237 (252)
T ss_pred hC
Confidence 53
No 473
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=8e-38 Score=362.36 Aligned_cols=221 Identities=29% Similarity=0.396 Sum_probs=183.6
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCC--------ccEEEECCeecCCccH
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPT--------KGLITLDGHDLKSLQV 744 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~--------~G~I~i~g~~i~~~~~ 744 (1560)
|+++|++++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|+ +|+|.++|.++...+.
T Consensus 2 l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 789999999963 45899999999999999999999999999999999999998 9999999999987777
Q ss_pred HHHhccEEEEecCCc-CccccHHHHHhcCCCCC-CHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHH
Q 000406 745 KWLRTQIGMVGQEPI-LFATSILENVLMGKENA-TMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIAL 822 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~-lf~~Tv~eNi~~g~~~~-~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRial 822 (1560)
..+++.++||+|++. ++..|++||+.++.... .............+.+.++.+ |+.+.++....+||||||||++|
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~l 156 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALA--GATALVGRDVTTLSGGELARVQF 156 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHH
Confidence 777788999999986 56779999998763210 000000000011122334443 66667778888999999999999
Q ss_pred HHHhc---------cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-C-CcEEEEEecCcccccc-CCEEEEEeCCeEEEe
Q 000406 823 ARAMI---------KDPRILLLDEPTSALDSESESIVQQAIDKIS-V-GRTTIVIAHRLATVKN-ANTIVVLDQGSVVEI 890 (1560)
Q Consensus 823 ARAl~---------~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~-~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~ 890 (1560)
||||+ .+|++|||||||++||+.+.+.+.+.|+++. + ++|+|+|||+++.+.. ||++++|++|++++.
T Consensus 157 aral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l~~G~i~~~ 236 (272)
T PRK13547 157 ARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAMLADGAIVAH 236 (272)
T ss_pred HHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEEe
Confidence 99999 5999999999999999999999999999874 3 7999999999999865 999999999999999
Q ss_pred cChhhHhh
Q 000406 891 GNHRQLLE 898 (1560)
Q Consensus 891 G~~~~l~~ 898 (1560)
|++++++.
T Consensus 237 g~~~~~~~ 244 (272)
T PRK13547 237 GAPADVLT 244 (272)
T ss_pred cCHHHHcC
Confidence 99988764
No 474
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=4.5e-38 Score=370.88 Aligned_cols=204 Identities=23% Similarity=0.400 Sum_probs=172.8
Q ss_pred ccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEEEEecCCcCccc-cHH
Q 000406 688 TVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFAT-SIL 766 (1560)
Q Consensus 688 ~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~-Tv~ 766 (1560)
.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++... ...+|++|+||||++.++.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVRE-PRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccC-HHHHHhhcEEecCCCCCCCCCcHH
Confidence 4689999999999999999999999999999999999999999999999998753 34567889999999999876 999
Q ss_pred HHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCH
Q 000406 767 ENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDS 844 (1560)
Q Consensus 767 eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~ 844 (1560)
||+.+.... ....+..+ .+.+.++.+ |+.........+||||||||++|||||+.+|++|||||||++||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~ 157 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEE-----RAEELLELF--ELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDP 157 (302)
T ss_pred HHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 999874211 11111111 122344444 455555667789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc-CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 845 ESESIVQQAIDKIS-VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 845 ~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
.+.+.+.+.|+++. +|+|||++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 158 ~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 158 RTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 99999999999874 58999999999999976 999999999999999999988653
No 475
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-38 Score=353.83 Aligned_cols=231 Identities=29% Similarity=0.448 Sum_probs=185.7
Q ss_pred EEEEEEEEEcCCCC-CccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC-C----CccEEEECCEecCCCCHHH
Q 000406 1314 IELKMVTFTYPSRP-EVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD-P----NQGKVMIEGVDLREINVKW 1387 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~-~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~-p----~~G~I~IdGvdi~~i~l~~ 1387 (1560)
++++|++..|.... ...+++||||+|++||++||||.|||||||+.++|+|+++ | .+|+|.++|.|+..++.++
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 68899999997532 2469999999999999999999999999999999999998 3 5799999999999999876
Q ss_pred Hh----hceEEEcCCCC--CCC-ccHHHH----HhcCCCCCC----HHHHHHHHHHHhHHHHHHhCCCCccccccCCCCC
Q 000406 1388 LR----KQTALVGQEPA--LFA-GTIRDN----IALGNPKAS----WAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQ 1452 (1560)
Q Consensus 1388 LR----~~I~~VpQdp~--LF~-gTIreN----L~~g~~~~s----d~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~ 1452 (1560)
+| +.|++|||||. |-+ -||.+- +..-....+ .+++.+.|+.+++.+- +..+..-..+
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~--------~~~~~~YPhe 153 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDP--------ERRLKSYPHE 153 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCH--------HHHHhhCCcc
Confidence 54 47999999995 221 244433 332111101 2345666666666431 1123334568
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCEEE
Q 000406 1453 LSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGAVV 1529 (1560)
Q Consensus 1453 LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~Iv 1529 (1560)
||||||||+.||-||+.+|++||.||||++||..+.++|.+.|+++.+ +.|+|+|||++..+.. ||||+||.+|+||
T Consensus 154 lSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iV 233 (316)
T COG0444 154 LSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIV 233 (316)
T ss_pred cCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEE
Confidence 999999999999999999999999999999999999999999998764 7899999999999876 9999999999999
Q ss_pred EecCHHHHHhhccChHHHHHHHH
Q 000406 1530 EYGSHETLLASHLNGVYASLVRA 1552 (1560)
Q Consensus 1530 E~Gt~~eLl~~~~~g~y~~l~~~ 1552 (1560)
|.|+.++++++.+..+-+.|++.
T Consensus 234 E~g~~~~i~~~P~HPYT~~Ll~s 256 (316)
T COG0444 234 EEGPVEEIFKNPKHPYTRGLLNS 256 (316)
T ss_pred EeCCHHHHhcCCCChHHHHHHHh
Confidence 99999999986555555566554
No 476
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-37 Score=358.76 Aligned_cols=218 Identities=32% Similarity=0.494 Sum_probs=182.6
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC-----CCccEEEECCeecCCc--cH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD-----PTKGLITLDGHDLKSL--QV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~-----~~~G~I~i~g~~i~~~--~~ 744 (1560)
.|+++||++.|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.+||.++... +.
T Consensus 3 ~l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 4789999999963 459999999999999999999999999999999999864 4899999999998653 35
Q ss_pred HHHhccEEEEecCCcCccccHHHHHhcCCCC--C-CHH----HHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHH
Q 000406 745 KWLRTQIGMVGQEPILFATSILENVLMGKEN--A-TMK----EAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQK 817 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~--~-~~~----~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQr 817 (1560)
..++++++|+||++.+|+.|++||+.++... . ..+ ++.++++..++.+++. ...+..+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVK-------DKLDKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHH-------HHHhCCcccCCHHHH
Confidence 5678899999999999999999999875321 1 111 2233344444433322 223566779999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 818 QRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 818 QRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999876 999999999999999999988
Q ss_pred hhh
Q 000406 897 LER 899 (1560)
Q Consensus 897 ~~~ 899 (1560)
...
T Consensus 233 ~~~ 235 (250)
T PRK14266 233 FIN 235 (250)
T ss_pred HhC
Confidence 643
No 477
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.4e-38 Score=347.29 Aligned_cols=228 Identities=32% Similarity=0.521 Sum_probs=195.2
Q ss_pred cEEEEEEEEEcCCCCC---------------------ccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCcc
Q 000406 1313 GIELKMVTFTYPSRPE---------------------VTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQG 1371 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~~~---------------------~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G 1371 (1560)
.|+++||+.-|..++. ..-++|+||+|+.||+..|.|-||||||||+++|.|+++|+.|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 4788888877753221 1247899999999999999999999999999999999999999
Q ss_pred EEEECCEecCCCCHHHHh----hceEEEcCCCCCCC-ccHHHHHhcCCC--CCC----HHHHHHHHHHHhHHHHHHhCCC
Q 000406 1372 KVMIEGVDLREINVKWLR----KQTALVGQEPALFA-GTIRDNIALGNP--KAS----WAEIEEAAEEAYIHKFISSLPQ 1440 (1560)
Q Consensus 1372 ~I~IdGvdi~~i~l~~LR----~~I~~VpQdp~LF~-gTIreNL~~g~~--~~s----d~eI~~al~~a~l~~~I~~Lp~ 1440 (1560)
+|++||.|+..++.++|| +++++|+|..-||+ .||.||..||.. ..+ .+...++++.++|.+|-.+.|+
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~ 163 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPN 163 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcc
Confidence 999999999999988774 57999999999886 599999999842 222 3446788999999988877764
Q ss_pred CccccccCCCCCCChHHHHHHHHHHHHccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-c
Q 000406 1441 GYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-A 1517 (1560)
Q Consensus 1441 Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-a 1517 (1560)
+||||+|||+.|||||..+|+||++|||.|+|||--...+|+-|.++.+ .+|+|+|||+|+.... -
T Consensus 164 -----------eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 164 -----------ELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred -----------cccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 6999999999999999999999999999999999999999999987643 5899999999998655 9
Q ss_pred CEEEEEeCCEEEEecCHHHHHhhccChHHHHHHH
Q 000406 1518 NMIAVVRDGAVVEYGSHETLLASHLNGVYASLVR 1551 (1560)
Q Consensus 1518 DrIlVLd~G~IvE~Gt~~eLl~~~~~g~y~~l~~ 1551 (1560)
|||..|++|+|+..|||+|++.+..+.+-+++++
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~~Fv~ 266 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYVRDFVR 266 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHHHHHHh
Confidence 9999999999999999999998543443344443
No 478
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-37 Score=349.20 Aligned_cols=205 Identities=29% Similarity=0.472 Sum_probs=169.1
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++|++++|++ .. .|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGE---QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCC---Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 578999999963 22 39999999999999999999999999999999999999999999999876543 356899
Q ss_pred EEecCCcCccc-cHHHHHhcCCCC-CC-HHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccC
Q 000406 753 MVGQEPILFAT-SILENVLMGKEN-AT-MKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKD 829 (1560)
Q Consensus 753 ~v~Q~~~lf~~-Tv~eNi~~g~~~-~~-~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~ 829 (1560)
|++|++.+|.+ |++||+.++... .. .++.. ..+.+.++.+ |++........+||||||||++|||||+.+
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~ia~al~~~ 146 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDR-----QAIEVALARV--GLAGLEKRLPGELSGGERQRVALARVLVRD 146 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHH-----HHHHHHHHHc--CCHHHHhCCcccCCHHHHHHHHHHHHHhcC
Confidence 99999999976 999999876421 11 01101 1112223332 444445556678999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEec
Q 000406 830 PRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIG 891 (1560)
Q Consensus 830 p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G 891 (1560)
|++|||||||++||+.++..+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 147 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 147 KPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999874 38999999999999976 9999999999998754
No 479
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.2e-37 Score=352.03 Aligned_cols=205 Identities=24% Similarity=0.391 Sum_probs=176.4
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.... ++.++
T Consensus 1 l~l~~v~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~ 73 (223)
T TIGR03740 1 LETKNLSKRFGK---QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIG 73 (223)
T ss_pred CEEEeEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEE
Confidence 578999999963 36999999999999999999999999999999999999999999999999875422 35799
Q ss_pred EEcCCCCCCC-ccHHHHHhcCC--CCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccC
Q 000406 1394 LVGQEPALFA-GTIRDNIALGN--PKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKG 1470 (1560)
Q Consensus 1394 ~VpQdp~LF~-gTIreNL~~g~--~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~ 1470 (1560)
|+||++.+|. .|++||+.++. ....++++.++++..++.+.... ....||||||||++||||++++
T Consensus 74 ~~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~~rv~laral~~~ 142 (223)
T TIGR03740 74 SLIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTGKK-----------KAKQFSLGMKQRLGIAIALLNH 142 (223)
T ss_pred EEcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHHhh-----------hHhhCCHHHHHHHHHHHHHhcC
Confidence 9999998886 69999997532 12345667777776666554322 2347999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHH
Q 000406 1471 SRVLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHET 1536 (1560)
Q Consensus 1471 p~ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~e 1536 (1560)
|+||||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|++.+
T Consensus 143 p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 143 PKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred CCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 99999999999999999999999999875 46899999999999865 99999999999999998765
No 480
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-38 Score=327.94 Aligned_cols=212 Identities=30% Similarity=0.510 Sum_probs=181.8
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
+++.+++.+|++ ...+++||||+++.||.+||.|+|||||||+++.|..|+.|++|+|.|||+|+.+- +...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~-p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRD-PSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccC-hHHHhhhcc
Confidence 678999999975 23589999999999999999999999999999999999999999999999998774 567899999
Q ss_pred EEcCCCCCCC-ccHHHHHhcCCC--CCCH----HHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHH
Q 000406 1394 LVGQEPALFA-GTIRDNIALGNP--KASW----AEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARA 1466 (1560)
Q Consensus 1394 ~VpQdp~LF~-gTIreNL~~g~~--~~sd----~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARA 1466 (1560)
+++-+.-|+. .|.||||.|+.. +..+ .++.+.-+..++.+. +|..++ +||-|+|||++||||
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~-------~~rRv~----~~S~G~kqkV~iARA 147 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEY-------LDRRVG----EFSTGMKQKVAIARA 147 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHH-------HHHHHh----hhchhhHHHHHHHHH
Confidence 9997777775 599999987521 2222 233333344444433 345555 699999999999999
Q ss_pred HccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC-CceEEEEecChHHHhh-cCEEEEEeCCEEEEecCHHHHHh
Q 000406 1467 ILKGSRVLLLDEASSALDLESEKHVQDALRKVSK-RATTIVVAHRLSTIRE-ANMIAVVRDGAVVEYGSHETLLA 1539 (1560)
Q Consensus 1467 LLr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~-~~TvI~IAHRlsti~~-aDrIlVLd~G~IvE~Gt~~eLl~ 1539 (1560)
|+++|+|+|||||||+||.-+.+.+++-|++... +++||+-||-++.++. ||||+++.+|+++..|++++|.+
T Consensus 148 lvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~ 222 (245)
T COG4555 148 LVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDA 222 (245)
T ss_pred HhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHH
Confidence 9999999999999999999999999999998754 8999999999999984 99999999999999999999987
No 481
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-37 Score=360.20 Aligned_cols=218 Identities=30% Similarity=0.473 Sum_probs=181.6
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC-----CccEEEECCeecCC--cc
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP-----TKGLITLDGHDLKS--LQ 743 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~-----~~G~I~i~g~~i~~--~~ 743 (1560)
-.|+++|++++|+. ..+|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|+++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 19 SVFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred ceEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 36999999999963 3589999999999999999999999999999999999863 69999999999864 33
Q ss_pred HHHHhccEEEEecCCcCccccHHHHHhcCCCCCC-----HHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHH
Q 000406 744 VKWLRTQIGMVGQEPILFATSILENVLMGKENAT-----MKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQ 818 (1560)
Q Consensus 744 ~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~~~-----~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQ 818 (1560)
...++++|+|++|++.+|+.|+.|||.++..... .+.+.++++.+++.+.+ ....+..+.+|||||||
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~q 168 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEV-------KDKLKEKGTALSGGQQQ 168 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhh-------HHHhcCCcccCCHHHHH
Confidence 4466789999999999998899999987632110 11222233333332221 22345667899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEe---------CCeEE
Q 000406 819 RIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLD---------QGSVV 888 (1560)
Q Consensus 819 RialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~---------~G~iv 888 (1560)
|++|||||+.+|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|+ +|+++
T Consensus 169 rv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~ 248 (274)
T PRK14265 169 RLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLV 248 (274)
T ss_pred HHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 999999999999999999999999999999999999988778999999999999875 99999997 89999
Q ss_pred EecChhhHhh
Q 000406 889 EIGNHRQLLE 898 (1560)
Q Consensus 889 ~~G~~~~l~~ 898 (1560)
+.|+++++..
T Consensus 249 ~~g~~~~~~~ 258 (274)
T PRK14265 249 EFSPTEQMFG 258 (274)
T ss_pred EeCCHHHHHh
Confidence 9999998864
No 482
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=374.10 Aligned_cols=211 Identities=27% Similarity=0.457 Sum_probs=178.9
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCc----cHHHHh
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSL----QVKWLR 748 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~----~~~~lr 748 (1560)
|++ |++++|++ . .+ |+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|+++... +....+
T Consensus 2 l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 667 99999963 2 23 89999999999999999999999999999999999999999999998643 233456
Q ss_pred ccEEEEecCCcCccc-cHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhc
Q 000406 749 TQIGMVGQEPILFAT-SILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMI 827 (1560)
Q Consensus 749 ~~i~~v~Q~~~lf~~-Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~ 827 (1560)
++|+||+|++.+|+. |++|||.++......+++. +.++.+ |++......+.+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~---------~~l~~~--gl~~~~~~~~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFD---------KIVALL--GIEPLLDRYPGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHH---------HHHHHc--CCchhhhCCcccCCHHHHHHHHHHHHHH
Confidence 789999999999975 9999999875322222222 233333 5555566777899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhhc
Q 000406 828 KDPRILLLDEPTSALDSESESIVQQAIDKISV--GRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLERG 900 (1560)
Q Consensus 828 ~~p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~~ 900 (1560)
.+|++|||||||++||+.+++.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..+.
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p 220 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASS 220 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCc
Confidence 99999999999999999999999999988743 7899999999998866 9999999999999999999997643
No 483
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5.9e-39 Score=333.80 Aligned_cols=223 Identities=23% Similarity=0.437 Sum_probs=191.9
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHH-HHhc
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVK-WLRT 749 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~-~lr~ 749 (1560)
+.+..+|+.++|.. +.|+++|||++++||+|++.||||+||||.+.++.|+.+|++|+|.+||.|++.++.. .-|-
T Consensus 3 ~~L~a~~l~K~y~k---r~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArl 79 (243)
T COG1137 3 STLVAENLAKSYKK---RKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARL 79 (243)
T ss_pred cEEEehhhhHhhCC---eeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhc
Confidence 35789999999974 4689999999999999999999999999999999999999999999999999999876 4566
Q ss_pred cEEEEecCCcCccc-cHHHHHhcCCCCCCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhcc
Q 000406 750 QIGMVGQEPILFAT-SILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIK 828 (1560)
Q Consensus 750 ~i~~v~Q~~~lf~~-Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~ 828 (1560)
.|||+||||.+|.. ||+|||..-.+.. .+....+.+...+++.++++ .+.......+..||||||+|+.|||||..
T Consensus 80 GigYLpQE~SIFr~LtV~dNi~~vlE~~-~~d~~~~~~~~~l~~LL~ef--~i~hlr~~~a~sLSGGERRR~EIARaLa~ 156 (243)
T COG1137 80 GIGYLPQEASIFRKLTVEDNIMAVLEIR-EKDLKKAERKEELDALLEEF--HITHLRDSKAYSLSGGERRRVEIARALAA 156 (243)
T ss_pred CcccccccchHhhcCcHHHHHHHHHhhh-hcchhHHHHHHHHHHHHHHh--chHHHhcCcccccccchHHHHHHHHHHhc
Confidence 89999999999987 9999998765422 11112223333444555555 56677788899999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCccc-cccCCEEEEEeCCeEEEecChhhHhhh
Q 000406 829 DPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLAT-VKNANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 829 ~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~-i~~~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
+|+.+|||||++++||.+-..|++.++.+. +|-.|++.-|+..+ +.-|||.+++.+|+|...|+|+|+.++
T Consensus 157 ~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 157 NPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred CCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 999999999999999999999999999884 58899999999876 456999999999999999999999864
No 484
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-37 Score=360.33 Aligned_cols=220 Identities=30% Similarity=0.463 Sum_probs=183.5
Q ss_pred CcccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC-----CccEEEECCeecCC--
Q 000406 669 VSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP-----TKGLITLDGHDLKS-- 741 (1560)
Q Consensus 669 ~~g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~-----~~G~I~i~g~~i~~-- 741 (1560)
..+.|+++|++++|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.++..
T Consensus 13 ~~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~ 89 (265)
T PRK14252 13 TQQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILS 89 (265)
T ss_pred CCceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccc
Confidence 3567999999999973 3599999999999999999999999999999999999875 79999999987742
Q ss_pred --ccHHHHhccEEEEecCCcCccccHHHHHhcCCCC--CC-----HHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCC
Q 000406 742 --LQVKWLRTQIGMVGQEPILFATSILENVLMGKEN--AT-----MKEAVAACKAASAHSFISELPLGYDTQVGDRGTQL 812 (1560)
Q Consensus 742 --~~~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~--~~-----~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~L 812 (1560)
.....+++.|+|++|++.+|.+|++|||.++... .. .+++.++++.+++.+ ++....+..+.+|
T Consensus 90 ~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~L 162 (265)
T PRK14252 90 PEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWD-------EVKDRLGDLAFNL 162 (265)
T ss_pred cccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCch-------hhhHHHhCCcccC
Confidence 3345678889999999999999999999875311 11 122223333332211 2334456677899
Q ss_pred ChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEec
Q 000406 813 SGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIG 891 (1560)
Q Consensus 813 SgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G 891 (1560)
|||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 163 S~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g 242 (265)
T PRK14252 163 SGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFG 242 (265)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999988767999999999999965 9999999999999999
Q ss_pred ChhhHhh
Q 000406 892 NHRQLLE 898 (1560)
Q Consensus 892 ~~~~l~~ 898 (1560)
+++++..
T Consensus 243 ~~~~~~~ 249 (265)
T PRK14252 243 ATDTIFI 249 (265)
T ss_pred CHHHHHh
Confidence 9988754
No 485
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.5e-37 Score=359.75 Aligned_cols=220 Identities=30% Similarity=0.429 Sum_probs=181.0
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCC---ccEEEECCeecCCc-----c
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPT---KGLITLDGHDLKSL-----Q 743 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~---~G~I~i~g~~i~~~-----~ 743 (1560)
.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 4899999999963 45899999999999999999999999999999999999986 49999999988653 2
Q ss_pred HHHHhccEEEEecCCcCccc-cHHHHHhcCCCCCCH--HH---HHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHH
Q 000406 744 VKWLRTQIGMVGQEPILFAT-SILENVLMGKENATM--KE---AVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQK 817 (1560)
Q Consensus 744 ~~~lr~~i~~v~Q~~~lf~~-Tv~eNi~~g~~~~~~--~~---~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQr 817 (1560)
...++++++|+||++.+|+. |++||+.++...... .. .........+.+.++.+ |+....+..+.+||||||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~ 158 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRV--GMVHFAHQRVSTLSGGQQ 158 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHc--CCHHHHhCCccccCHHHH
Confidence 34567789999999998875 999999876421100 00 00001111233445544 455556677789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChh
Q 000406 818 QRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHR 894 (1560)
Q Consensus 818 QRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~ 894 (1560)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 159 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~i~~~g~~~ 238 (262)
T PRK09984 159 QRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGHVFYDGSSQ 238 (262)
T ss_pred HHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999999999999874 38999999999998765 9999999999999999998
Q ss_pred hH
Q 000406 895 QL 896 (1560)
Q Consensus 895 ~l 896 (1560)
++
T Consensus 239 ~~ 240 (262)
T PRK09984 239 QF 240 (262)
T ss_pred Hh
Confidence 86
No 486
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-37 Score=351.86 Aligned_cols=214 Identities=29% Similarity=0.498 Sum_probs=177.0
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++||+++|+. . ..|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+.. ++.++
T Consensus 2 l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~--~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPS--RRPVS 74 (232)
T ss_pred eEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChh--hccEE
Confidence 789999999963 2 2499999999999999999999999999999999999999999999998765432 46799
Q ss_pred EEecCCcCccc-cHHHHHhcCCCC-CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccCC
Q 000406 753 MVGQEPILFAT-SILENVLMGKEN-ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDP 830 (1560)
Q Consensus 753 ~v~Q~~~lf~~-Tv~eNi~~g~~~-~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~p 830 (1560)
|++|++.+|.+ |+.||+.++... ..... .....+.+.++.+ |++..+......||||||||++||||++++|
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~----~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~p 148 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNA----AQREKLHAIARQM--GIEDLLARLPGQLSGGQRQRVALARCLVREQ 148 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCH----HHHHHHHHHHHHc--CcHHHHhCCcccCCHHHHHHHHHHHHHhcCC
Confidence 99999999986 999999875311 11000 0011122233333 4444556666789999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhhh
Q 000406 831 RILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLER 899 (1560)
Q Consensus 831 ~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~~ 899 (1560)
++|||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 149 ~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 149 PILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999998873 38899999999999876 999999999999999999888653
No 487
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-37 Score=337.37 Aligned_cols=170 Identities=32% Similarity=0.603 Sum_probs=157.8
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
++++||+++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+ ..+|+.++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 76 (173)
T cd03230 1 IEVRNLSKRYGK---KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIG 76 (173)
T ss_pred CEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEE
Confidence 478999999963 35999999999999999999999999999999999999999999999999998766 67788999
Q ss_pred EEcCCCCCCCc-cHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCC
Q 000406 1394 LVGQEPALFAG-TIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSR 1472 (1560)
Q Consensus 1394 ~VpQdp~LF~g-TIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~ 1472 (1560)
|+||++.+|.+ |++||+. ||||||||++|||||+++|+
T Consensus 77 ~~~q~~~~~~~~tv~~~~~-----------------------------------------LS~G~~qrv~laral~~~p~ 115 (173)
T cd03230 77 YLPEEPSLYENLTVRENLK-----------------------------------------LSGGMKQRLALAQALLHDPE 115 (173)
T ss_pred EEecCCccccCCcHHHHhh-----------------------------------------cCHHHHHHHHHHHHHHcCCC
Confidence 99999999886 9999983 99999999999999999999
Q ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHhc-CCceEEEEecChHHHhh-cCEEEEEeCCEE
Q 000406 1473 VLLLDEASSALDLESEKHVQDALRKVS-KRATTIVVAHRLSTIRE-ANMIAVVRDGAV 1528 (1560)
Q Consensus 1473 ILILDEaTSaLD~~Te~~I~~~L~~~~-~~~TvI~IAHRlsti~~-aDrIlVLd~G~I 1528 (1560)
||||||||++||+.+.+.+.+.|++.. ++.|+|+|||+++.+.. ||+|++|++|++
T Consensus 116 illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 116 LLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 999999999999999999999999875 45899999999999884 999999999974
No 488
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-38 Score=371.99 Aligned_cols=227 Identities=21% Similarity=0.334 Sum_probs=182.5
Q ss_pred cEEEEEEEEEcCCC-CCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC----CCccEEEECCeecCCccHHH
Q 000406 672 KIEFKGVTFAYPSR-PETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD----PTKGLITLDGHDLKSLQVKW 746 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~-~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~----~~~G~I~i~g~~i~~~~~~~ 746 (1560)
-|+++|++++|+.. +...+|+||||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|+++..++...
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 37999999999642 22468999999999999999999999999999999999986 58999999999998877654
Q ss_pred H----hccEEEEecCCc--Ccc-ccHHHHHhcCCC---CC-----CHHHHHHHHHHhhhHHHHHhCCCCCC---cccCCC
Q 000406 747 L----RTQIGMVGQEPI--LFA-TSILENVLMGKE---NA-----TMKEAVAACKAASAHSFISELPLGYD---TQVGDR 808 (1560)
Q Consensus 747 l----r~~i~~v~Q~~~--lf~-~Tv~eNi~~g~~---~~-----~~~~~~~~~~~~~~~~~i~~l~~gl~---t~~~~~ 808 (1560)
+ ++.|+||+|+|. +.+ .||.+|+..... .. ...+. ...+.+.++.+ |++ ......
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~L~~~--gL~~~~~~~~~~ 155 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWR-----KRRAIELLHRV--GIKDHKDAMRSF 155 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHH-----HHHHHHHHHHC--CCCChHHHHhCC
Confidence 3 347999999996 333 489999864210 00 00111 11223344444 443 234567
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCC
Q 000406 809 GTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQG 885 (1560)
Q Consensus 809 g~~LSgGQrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G 885 (1560)
+.+|||||||||+|||||+.+|+||||||||++||+.+...+.+.|+++. .|.|+|+|||+++.+.. ||+|++|++|
T Consensus 156 p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~G 235 (330)
T PRK15093 156 PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYCG 235 (330)
T ss_pred chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECC
Confidence 78999999999999999999999999999999999999999999999874 38999999999999976 9999999999
Q ss_pred eEEEecChhhHhhhc-chHHH
Q 000406 886 SVVEIGNHRQLLERG-GAYHD 905 (1560)
Q Consensus 886 ~iv~~G~~~~l~~~~-~~~~~ 905 (1560)
+|++.|+++++.... ..|.+
T Consensus 236 ~ive~g~~~~i~~~p~~~y~~ 256 (330)
T PRK15093 236 QTVETAPSKELVTTPHHPYTQ 256 (330)
T ss_pred EEEEECCHHHHHhCCCCHHHH
Confidence 999999999987642 34544
No 489
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-37 Score=345.36 Aligned_cols=191 Identities=25% Similarity=0.404 Sum_probs=163.4
Q ss_pred cEEEEEEEEEcCCC-CCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccC---CCccEEEECCEecCCCCHHHH
Q 000406 1313 GIELKMVTFTYPSR-PEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYD---PNQGKVMIEGVDLREINVKWL 1388 (1560)
Q Consensus 1313 ~I~~~nVsf~Y~~~-~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~---p~~G~I~IdGvdi~~i~l~~L 1388 (1560)
.+.++||+|.|+.. .+.++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++...+ ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 47899999999853 34579999999999999999999999999999999999999 89999999999998765 456
Q ss_pred hhceEEEcCCCCCCC-ccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHH
Q 000406 1389 RKQTALVGQEPALFA-GTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAI 1467 (1560)
Q Consensus 1389 R~~I~~VpQdp~LF~-gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARAL 1467 (1560)
|+.++|+||++.+|. .|++|||.++.. .. .+ +....||||||||++|||||
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~------~~------------------~~----~~~~~LS~Ge~qrl~laral 133 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALR------CK------------------GN----EFVRGISGGERKRVSIAEAL 133 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhh------hc------------------cc----cchhhCCHHHHHHHHHHHHH
Confidence 889999999998887 599999976421 00 12 23347999999999999999
Q ss_pred ccCCCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEe-cChHHH-hhcCEEEEEeCCEEEEec
Q 000406 1468 LKGSRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVA-HRLSTI-REANMIAVVRDGAVVEYG 1532 (1560)
Q Consensus 1468 Lr~p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IA-HRlsti-~~aDrIlVLd~G~IvE~G 1532 (1560)
+++|+||||||||++||+++.+.+.+.|++..+ ++|+|+++ |+++.+ ..||+|++|++|++++.|
T Consensus 134 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 134 VSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred hhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 999999999999999999999999999998754 46766655 555666 459999999999998865
No 490
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=360.08 Aligned_cols=219 Identities=31% Similarity=0.495 Sum_probs=179.7
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCC-----CccEEEECCeecCC--ccH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDP-----TKGLITLDGHDLKS--LQV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~-----~~G~I~i~g~~i~~--~~~ 744 (1560)
.|+++||+++|++ ..+|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999963 3589999999999999999999999999999999999974 79999999999853 344
Q ss_pred HHHhccEEEEecCCcCccc-cHHHHHhcCCCC---CCHHHHHHHHHHhhhHHHHHhCCC--CCCcccCCCCCCCChHHHH
Q 000406 745 KWLRTQIGMVGQEPILFAT-SILENVLMGKEN---ATMKEAVAACKAASAHSFISELPL--GYDTQVGDRGTQLSGGQKQ 818 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~lf~~-Tv~eNi~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~--gl~t~~~~~g~~LSgGQrQ 818 (1560)
..+++.|+|++|++.+|.. |++||+.++... ...++..+ .+.+.++.+.. ++.......+.+|||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~q 155 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDE-----LVEKSLRGANLWNEVKDRLDKPGGGLSGGQQQ 155 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHH-----HHHHHHHHcCCchhhhhHhhCCcccCCHHHHH
Confidence 5678889999999999874 999999865311 11111111 11122222211 1123456677899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEe------CCeEEEec
Q 000406 819 RIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLD------QGSVVEIG 891 (1560)
Q Consensus 819 RialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~------~G~iv~~G 891 (1560)
|++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|+ +|+|++.|
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~~ 235 (258)
T PRK14241 156 RLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEID 235 (258)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEecC
Confidence 999999999999999999999999999999999999988667999999999999865 99999997 89999999
Q ss_pred ChhhHhh
Q 000406 892 NHRQLLE 898 (1560)
Q Consensus 892 ~~~~l~~ 898 (1560)
++++++.
T Consensus 236 ~~~~~~~ 242 (258)
T PRK14241 236 DTEKIFS 242 (258)
T ss_pred CHHHHHh
Confidence 9988864
No 491
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=9e-38 Score=353.73 Aligned_cols=214 Identities=24% Similarity=0.397 Sum_probs=172.2
Q ss_pred EEEEEEEEEcCCCC-CccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC---CCccEEEECCeecCCccHHHHh
Q 000406 673 IEFKGVTFAYPSRP-ETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD---PTKGLITLDGHDLKSLQVKWLR 748 (1560)
Q Consensus 673 i~~~~vs~~y~~~~-~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~---~~~G~I~i~g~~i~~~~~~~lr 748 (1560)
++++||+++|++.+ .+++|+|+||+|++||+++|+||||||||||+++|+|+++ |++|+|.++|+++.. ..+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~---~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKP---DQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECCh---HHhc
Confidence 57999999998542 3579999999999999999999999999999999999999 999999999998752 4567
Q ss_pred ccEEEEecCCcCccc-cHHHHHhcCCCCCCHHHHHHHHHHhhhHH-HHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHh
Q 000406 749 TQIGMVGQEPILFAT-SILENVLMGKENATMKEAVAACKAASAHS-FISELPLGYDTQVGDRGTQLSGGQKQRIALARAM 826 (1560)
Q Consensus 749 ~~i~~v~Q~~~lf~~-Tv~eNi~~g~~~~~~~~~~~~~~~~~~~~-~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl 826 (1560)
++++|++|++.+|++ |++||+.++...................+ .++.+ ++.........+||||||||++|||||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral 158 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSIAVQL 158 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHHHHHH
Confidence 889999999999987 99999987522110000000011111111 23332 444445566789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCc-cccc-cCCEEEEEeCCeEEEec
Q 000406 827 IKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRL-ATVK-NANTIVVLDQGSVVEIG 891 (1560)
Q Consensus 827 ~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l-~~i~-~~D~i~vl~~G~iv~~G 891 (1560)
+++|++|||||||++||+.+...+.+.|+++. +++|+|++||++ +.+. .||+|++|++|++++.|
T Consensus 159 ~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 159 LWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999998874 488999999998 4665 59999999999999865
No 492
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=1.3e-37 Score=359.61 Aligned_cols=217 Identities=28% Similarity=0.448 Sum_probs=180.7
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCee-----cCCccHHH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHD-----LKSLQVKW 746 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~-----i~~~~~~~ 746 (1560)
.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.+ +...+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999964 358999999999999999999999999999999999999999999999998 77665443
Q ss_pred ----HhccEEEEecCCc--Ccc-ccHHHHHhcCC---CCCCHHHHHHHHHHhhhHHHHHhCCCCCC-cccCCCCCCCChH
Q 000406 747 ----LRTQIGMVGQEPI--LFA-TSILENVLMGK---ENATMKEAVAACKAASAHSFISELPLGYD-TQVGDRGTQLSGG 815 (1560)
Q Consensus 747 ----lr~~i~~v~Q~~~--lf~-~Tv~eNi~~g~---~~~~~~~~~~~~~~~~~~~~i~~l~~gl~-t~~~~~g~~LSgG 815 (1560)
.++.++||+|++. ++. .|+.+||.+.. ......+.. ..+.++++.+ |++ +..+..+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIR-----ATAGDWLERV--EIDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHH-----HHHHHHHHHc--CCChhHHhCCCccCCHH
Confidence 3567999999984 444 48899986421 011111211 1234556666 343 4567888999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecC
Q 000406 816 QKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGN 892 (1560)
Q Consensus 816 QrQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~ 892 (1560)
||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++. .|.|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999999999998874 38899999999999975 99999999999999999
Q ss_pred hhhHhh
Q 000406 893 HRQLLE 898 (1560)
Q Consensus 893 ~~~l~~ 898 (1560)
++++..
T Consensus 236 ~~~~~~ 241 (258)
T PRK11701 236 TDQVLD 241 (258)
T ss_pred HHHHhc
Confidence 988764
No 493
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-37 Score=358.12 Aligned_cols=217 Identities=30% Similarity=0.465 Sum_probs=179.2
Q ss_pred cEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC--C---CccEEEECCeecCC--ccH
Q 000406 672 KIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD--P---TKGLITLDGHDLKS--LQV 744 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~--~---~~G~I~i~g~~i~~--~~~ 744 (1560)
.|+++||+++|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 4899999999973 458999999999999999999999999999999999875 4 59999999998864 234
Q ss_pred HHHhccEEEEecCCcCccccHHHHHhcCCC--CC-CHH----HHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHH
Q 000406 745 KWLRTQIGMVGQEPILFATSILENVLMGKE--NA-TMK----EAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQK 817 (1560)
Q Consensus 745 ~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~--~~-~~~----~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQr 817 (1560)
..+++.++|++|++.+|+.|+++|+.++.. .. ..+ ++.+.++..++. .++....+..+.+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~i~~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIW-------DEVKDHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCc-------cchhhHHhcCcccCCHHHH
Confidence 456788999999999998999999987521 11 111 111122222211 1222345566789999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhH
Q 000406 818 QRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQL 896 (1560)
Q Consensus 818 QRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l 896 (1560)
||++|||||+++|+||||||||++||+.+++.+.+.|+++.++.|+|+|||+++.+.. ||+|++|++|++++.|++.++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988667899999999999875 999999999999999998887
Q ss_pred hh
Q 000406 897 LE 898 (1560)
Q Consensus 897 ~~ 898 (1560)
..
T Consensus 235 ~~ 236 (252)
T PRK14255 235 FL 236 (252)
T ss_pred hc
Confidence 64
No 494
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-37 Score=335.53 Aligned_cols=171 Identities=57% Similarity=0.894 Sum_probs=161.6
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCCHHHHhhceE
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTA 1393 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~l~~LR~~I~ 1393 (1560)
|+++|++++|+.. ..++|+|+||+|++||.++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+|+.++
T Consensus 1 l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (171)
T cd03228 1 IEFKNVSFSYPGR-PKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIA 79 (171)
T ss_pred CEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEE
Confidence 5789999999643 235999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEcCCCCCCCccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccCCCE
Q 000406 1394 LVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRV 1473 (1560)
Q Consensus 1394 ~VpQdp~LF~gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~p~I 1473 (1560)
|+||++.+|+.|+.||+ ||||||||++|||||+++|++
T Consensus 80 ~~~~~~~~~~~t~~e~l------------------------------------------LS~G~~~rl~la~al~~~p~l 117 (171)
T cd03228 80 YVPQDPFLFSGTIRENI------------------------------------------LSGGQRQRIAIARALLRDPPI 117 (171)
T ss_pred EEcCCchhccchHHHHh------------------------------------------hCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred EEEeCCCcCCCHHHHHHHHHHHHHhcCCceEEEEecChHHHhhcCEEEEEeCCE
Q 000406 1474 LLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGA 1527 (1560)
Q Consensus 1474 LILDEaTSaLD~~Te~~I~~~L~~~~~~~TvI~IAHRlsti~~aDrIlVLd~G~ 1527 (1560)
|||||||++||+.+...+.+.|++..+++|+|++||+++.+..||++++|++|+
T Consensus 118 lllDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 118 LILDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EEEECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 999999999999999999999998877799999999999998899999999985
No 495
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=1.4e-37 Score=356.29 Aligned_cols=214 Identities=24% Similarity=0.353 Sum_probs=175.5
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCC--CCCccEEEECCeecCCccHHHH-hc
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFY--DPTKGLITLDGHDLKSLQVKWL-RT 749 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~--~~~~G~I~i~g~~i~~~~~~~l-r~ 749 (1560)
|+++|++++|+. .++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.++|.++...+.... +.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 578999999963 45899999999999999999999999999999999994 7999999999999987766543 45
Q ss_pred cEEEEecCCcCccc-cHHHHHhcCCCCC---------CHHHHHHHHHHhhhHHHHHhCCCCCCc-ccCCCCC-CCChHHH
Q 000406 750 QIGMVGQEPILFAT-SILENVLMGKENA---------TMKEAVAACKAASAHSFISELPLGYDT-QVGDRGT-QLSGGQK 817 (1560)
Q Consensus 750 ~i~~v~Q~~~lf~~-Tv~eNi~~g~~~~---------~~~~~~~~~~~~~~~~~i~~l~~gl~t-~~~~~g~-~LSgGQr 817 (1560)
.++||+|++.+|++ |++||+.+..... ..++.. ..+.+.++.+ |+.. ..+.... +||||||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~~LS~G~~ 150 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFL-----KLLKAKLALL--GMDEEFLNRSVNEGFSGGEK 150 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHH-----HHHHHHHHHc--CCchhhcccccccCcCHHHH
Confidence 69999999999886 9999997642110 111111 1122334443 4432 2344444 5999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc-CCcEEEEEecCcccccc--CCEEEEEeCCeEEEecChh
Q 000406 818 QRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS-VGRTTIVIAHRLATVKN--ANTIVVLDQGSVVEIGNHR 894 (1560)
Q Consensus 818 QRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~-~~~tvi~itH~l~~i~~--~D~i~vl~~G~iv~~G~~~ 894 (1560)
||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. +++|||+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 151 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (243)
T TIGR01978 151 KRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVE 230 (243)
T ss_pred HHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHH
Confidence 99999999999999999999999999999999999999874 47999999999999875 7999999999999999887
Q ss_pred hH
Q 000406 895 QL 896 (1560)
Q Consensus 895 ~l 896 (1560)
++
T Consensus 231 ~~ 232 (243)
T TIGR01978 231 LA 232 (243)
T ss_pred Hh
Confidence 54
No 496
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=2.7e-37 Score=358.27 Aligned_cols=221 Identities=24% Similarity=0.401 Sum_probs=179.5
Q ss_pred cEEEEEEEEEcCCC------CCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHH
Q 000406 672 KIEFKGVTFAYPSR------PETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVK 745 (1560)
Q Consensus 672 ~i~~~~vs~~y~~~------~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~ 745 (1560)
.|+++||+++|+.. ...++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+..
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999631 124699999999999999999999999999999999999999999999999998755555
Q ss_pred HHhccEEEEecCCc--Cccc-cHHHHHhcCCC---CCCHHHHHHHHHHhhhHHHHHhCCCCCC-cccCCCCCCCChHHHH
Q 000406 746 WLRTQIGMVGQEPI--LFAT-SILENVLMGKE---NATMKEAVAACKAASAHSFISELPLGYD-TQVGDRGTQLSGGQKQ 818 (1560)
Q Consensus 746 ~lr~~i~~v~Q~~~--lf~~-Tv~eNi~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~gl~-t~~~~~g~~LSgGQrQ 818 (1560)
..+++|+||+|++. +++. |+.+|+.+... .....+..+ .+.+.++.+ |++ ........+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~LS~G~~q 156 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREK-----QIIETLRQV--GLLPDHASYYPHMLAPGQKQ 156 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHH-----HHHHHHHHc--CCChHHHhcCchhcCHHHHH
Confidence 56678999999985 4444 89999875321 111111111 112233333 332 2234456789999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhh
Q 000406 819 RIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQ 895 (1560)
Q Consensus 819 RialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~ 895 (1560)
|++|||||+.+|+||||||||++||+.+.+.+.+.|+++. .|+|||+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 157 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 236 (267)
T PRK15112 157 RLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERGSTAD 236 (267)
T ss_pred HHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHH
Confidence 9999999999999999999999999999999999999874 38999999999999986 99999999999999999999
Q ss_pred Hhhh
Q 000406 896 LLER 899 (1560)
Q Consensus 896 l~~~ 899 (1560)
+...
T Consensus 237 ~~~~ 240 (267)
T PRK15112 237 VLAS 240 (267)
T ss_pred HhcC
Confidence 8764
No 497
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-37 Score=363.70 Aligned_cols=219 Identities=30% Similarity=0.456 Sum_probs=180.4
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCC-----CCccEEEECCeecCCc--c
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD-----PTKGLITLDGHDLKSL--Q 743 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~-----~~~G~I~i~g~~i~~~--~ 743 (1560)
..|+++|++++|+. ..+|+|+||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.++|.++... +
T Consensus 38 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 38 PHVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred eEEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 35899999999963 358999999999999999999999999999999999864 4999999999988643 3
Q ss_pred HHHHhccEEEEecCCcCccccHHHHHhcCCCC--C-CHH----HHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHH
Q 000406 744 VKWLRTQIGMVGQEPILFATSILENVLMGKEN--A-TMK----EAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQ 816 (1560)
Q Consensus 744 ~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~--~-~~~----~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQ 816 (1560)
...+|++|+||+|++.+|+.|++|||.++... . ... .+.++++..++.+ ++.......+..|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWD-------EVSDRLDKNALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCcc-------chhhHhhCChhhCCHHH
Confidence 34567889999999999988999999875321 1 111 1112222222111 11223456678999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhcCCcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhh
Q 000406 817 KQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQ 895 (1560)
Q Consensus 817 rQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~ 895 (1560)
|||++|||||+.+|++|||||||++||+.+...+.+.|+++.+++|||++||+++.+.. ||+|++|++|++++.|++++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988667899999999999865 99999999999999999988
Q ss_pred Hhhh
Q 000406 896 LLER 899 (1560)
Q Consensus 896 l~~~ 899 (1560)
+...
T Consensus 268 ~~~~ 271 (286)
T PRK14275 268 LFTN 271 (286)
T ss_pred HHhC
Confidence 8653
No 498
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-37 Score=338.17 Aligned_cols=172 Identities=43% Similarity=0.664 Sum_probs=159.6
Q ss_pred EEEEEEEEEcCCCCCccceeeeeEEEeCCcEEEEEcCCCCCHHHHHHHHhcccCCCccEEEECCEecCCCC--HHHHhhc
Q 000406 1314 IELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREIN--VKWLRKQ 1391 (1560)
Q Consensus 1314 I~~~nVsf~Y~~~~~~~vL~~vSf~I~~GE~vaIVG~SGSGKSTLl~lL~rl~~p~~G~I~IdGvdi~~i~--l~~LR~~ 1391 (1560)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++..++ ...+++.
T Consensus 1 i~~~~l~~~~~~---~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (178)
T cd03229 1 LELKNVSKRYGQ---KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRR 77 (178)
T ss_pred CEEEEEEEEECC---eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhc
Confidence 578999999963 35999999999999999999999999999999999999999999999999998876 5678899
Q ss_pred eEEEcCCCCCCC-ccHHHHHhcCCCCCCHHHHHHHHHHHhHHHHHHhCCCCccccccCCCCCCChHHHHHHHHHHHHccC
Q 000406 1392 TALVGQEPALFA-GTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKG 1470 (1560)
Q Consensus 1392 I~~VpQdp~LF~-gTIreNL~~g~~~~sd~eI~~al~~a~l~~~I~~Lp~Gldt~Vge~G~~LSGGQrQRLaLARALLr~ 1470 (1560)
++|+||+|.+|. .|++||+.+. ||||||||++|||||+++
T Consensus 78 i~~~~q~~~~~~~~t~~~~l~~~---------------------------------------lS~G~~qr~~la~al~~~ 118 (178)
T cd03229 78 IGMVFQDFALFPHLTVLENIALG---------------------------------------LSGGQQQRVALARALAMD 118 (178)
T ss_pred EEEEecCCccCCCCCHHHheeec---------------------------------------CCHHHHHHHHHHHHHHCC
Confidence 999999999886 5999999763 999999999999999999
Q ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHhcC--CceEEEEecChHHHhh-cCEEEEEeCCE
Q 000406 1471 SRVLLLDEASSALDLESEKHVQDALRKVSK--RATTIVVAHRLSTIRE-ANMIAVVRDGA 1527 (1560)
Q Consensus 1471 p~ILILDEaTSaLD~~Te~~I~~~L~~~~~--~~TvI~IAHRlsti~~-aDrIlVLd~G~ 1527 (1560)
|+++||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|+
T Consensus 119 p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 119 PDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 999999999999999999999999998764 5899999999999985 99999999985
No 499
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-37 Score=358.82 Aligned_cols=218 Identities=28% Similarity=0.464 Sum_probs=181.2
Q ss_pred ccEEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCC-----ccEEEECCeecCC--cc
Q 000406 671 GKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPT-----KGLITLDGHDLKS--LQ 743 (1560)
Q Consensus 671 g~i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~-----~G~I~i~g~~i~~--~~ 743 (1560)
+.|+++|++++|+. ..+|+|+||+|++||+++|+|+||||||||+++|+|+++|+ +|+|.++|+++.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 36999999999963 35899999999999999999999999999999999999985 8999999998753 34
Q ss_pred HHHHhccEEEEecCCcCccccHHHHHhcCCCC---CCHH----HHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHH
Q 000406 744 VKWLRTQIGMVGQEPILFATSILENVLMGKEN---ATMK----EAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQ 816 (1560)
Q Consensus 744 ~~~lr~~i~~v~Q~~~lf~~Tv~eNi~~g~~~---~~~~----~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQ 816 (1560)
...+++.++|++|++.+|+.|++||+.++... .... .+.++++..++.++ +....+..+.+|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDE-------IKHKIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcch-------hhhHhcCCcccCCHHH
Confidence 45678889999999999999999999864211 0111 12222323322211 2234566778999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHhc--CCcEEEEEecCcccccc-CCEEEEEeC-----CeEE
Q 000406 817 KQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKIS--VGRTTIVIAHRLATVKN-ANTIVVLDQ-----GSVV 888 (1560)
Q Consensus 817 rQRialARAl~~~p~illLDEpts~LD~~~~~~i~~~l~~~~--~~~tvi~itH~l~~i~~-~D~i~vl~~-----G~iv 888 (1560)
|||++|||||+++|+||||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 999999999999999999999999999999999999998863 48999999999999876 999999999 9999
Q ss_pred EecChhhHhh
Q 000406 889 EIGNHRQLLE 898 (1560)
Q Consensus 889 ~~G~~~~l~~ 898 (1560)
+.|+++++..
T Consensus 236 ~~~~~~~~~~ 245 (261)
T PRK14258 236 EFGLTKKIFN 245 (261)
T ss_pred EeCCHHHHHh
Confidence 9999999865
No 500
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.2e-37 Score=355.08 Aligned_cols=214 Identities=31% Similarity=0.501 Sum_probs=180.8
Q ss_pred EEEEEEEEEcCCCCCccccccceeEecCCCEEEEecCCCCChHHHHHHHhcCCCCCccEEEECCeecCCccHHHHhccEE
Q 000406 673 IEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIG 752 (1560)
Q Consensus 673 i~~~~vs~~y~~~~~~~vL~~isl~i~~Ge~vaivG~sGsGKSTLl~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~ 752 (1560)
|+++|++++|+. +++|+|+||+|.+||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+. .++.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 578999999974 359999999999999999999999999999999999999999999999999876543 467899
Q ss_pred EEecCCcCccc-cHHHHHhcCCCC--CCHHHHHHHHHHhhhHHHHHhCCCCCCcccCCCCCCCChHHHHHHHHHHHhccC
Q 000406 753 MVGQEPILFAT-SILENVLMGKEN--ATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKD 829 (1560)
Q Consensus 753 ~v~Q~~~lf~~-Tv~eNi~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGQrQRialARAl~~~ 829 (1560)
||||++.+|++ |++||+.++... ...... ...+.+.++.+ |+....+....+|||||+||++|||||+++
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrl~laral~~~ 148 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKI-----KARVEELLELV--QLEGLGDRYPNQLSGGQRQRVALARALAVE 148 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHH-----HHHHHHHHHHc--CCHhHhhCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999999976 999999875421 111111 11223455555 333445566679999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHhcC--CcEEEEEecCcccccc-CCEEEEEeCCeEEEecChhhHhh
Q 000406 830 PRILLLDEPTSALDSESESIVQQAIDKISV--GRTTIVIAHRLATVKN-ANTIVVLDQGSVVEIGNHRQLLE 898 (1560)
Q Consensus 830 p~illLDEpts~LD~~~~~~i~~~l~~~~~--~~tvi~itH~l~~i~~-~D~i~vl~~G~iv~~G~~~~l~~ 898 (1560)
|+++||||||++||+++++.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 149 p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 220 (237)
T TIGR00968 149 PQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYD 220 (237)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHc
Confidence 999999999999999999999999998743 7999999999999866 99999999999999999988864
Done!