Query 000406
Match_columns 1560
No_of_seqs 399 out of 4440
Neff 7.2
Searched_HMMs 29240
Date Tue Mar 26 18:00:25 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000406.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_183-186//hhsearch_pdb/000406hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4f4c_A Multidrug resistance pr 1.0 1 1 1773.1 136.4 1228 325-1556 55-1319(1321)
2 3g5u_A MCG1178, multidrug resi 1.0 1 1 1563.6 116.6 1226 327-1559 30-1276(1284)
3 4f4c_A Multidrug resistance pr 1.0 1 1 850.6 67.9 578 328-912 736-1318(1321)
4 3g5u_A MCG1178, multidrug resi 1.0 1 1 775.8 60.8 581 328-912 689-1272(1284)
5 3qf4_A ABC transporter, ATP-bi 1.0 1 1 739.9 67.5 568 333-911 12-579 (587)
6 3qf4_B Uncharacterized ABC tra 1.0 1 1 736.4 63.1 571 329-912 22-592 (598)
7 4a82_A Cystic fibrosis transme 1.0 1 1 735.3 62.8 574 332-909 2-575 (578)
8 3qf4_B Uncharacterized ABC tra 1.0 1 1 731.4 66.9 569 978-1556 24-593 (598)
9 3qf4_A ABC transporter, ATP-bi 1.0 1 1 726.7 71.6 570 979-1556 11-581 (587)
10 4a82_A Cystic fibrosis transme 1.0 1 1 723.7 67.7 571 979-1554 2-577 (578)
No 1
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=1773.12 Aligned_cols=1228 Identities=35% Similarity=0.581 Sum_probs=1055.9
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------------CCCCHHHHHHH
Q ss_conf 0137521999989850256799999999999999677799999999999870379--------------99704554477
Q 000406 325 EVAKPVGLFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANES--------------SDPDKTQMMKD 390 (1560)
Q Consensus 325 ~~~~~~~~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~--------------~~~~~~~~~~~ 390 (1560)
+..++++++.+|+|..+.++++++++++++++.+++.|++++++|++++.+.... .......+...
T Consensus 55 ~~~~~v~~~~Lfrya~~~d~~l~~~g~~~a~~~G~~~p~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (1321)
T 4f4c_A 55 EVVNKVSIPQLYRYTTTLEKLLLFIGTLVAVITGAGLPLMSILQGKVSQAFINEQIVINNNGSTFLPTGQNYTKTDFEHD 134 (1321)
T ss_dssp CCSSCCCHHHHTTTCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHTTSCBCSSTTCBCCHHHHHHH
T ss_pred CCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 25687799997315676789999999999999999999999999999999970100014543000344310016899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999999984590001037895699999999999999999999
Q 000406 391 AEKICLLMTVLAAIVMMGAYLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEK 470 (1560)
Q Consensus 391 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~l~ffd~~~~~G~i~sr~s~Di~~i~~~l~~~ 470 (1560)
+..+++.+++++++.+++.+++.+++.+.+++...++|.++|++++++|++|||++ ++|++++|+++|++.+++.+...
T Consensus 135 ~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~r~~~~lR~~~~~~ll~~~~~~fd~~-~~G~l~sr~~~D~~~i~~~~~~~ 213 (1321)
T 4f4c_A 135 VMNVVWSYAAMTVGMWAAGQITVTCYLYVAEQMNNRLRREFVKSILRQEISWFDTN-HSGTLATKLFDNLERVKEGTGDK 213 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHT-CCTTHHHHHHHHHHHHHHTSSHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999978898998799-84899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999999999999998978999999999999999999999999999899999999999999999945999998352
Q 000406 471 VAHFAHNIFTFICGYTVGFLRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVA 550 (1560)
Q Consensus 471 l~~~i~~i~~~i~~~ii~~~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIkaf~~ 550 (1560)
+..++..+++++++++++++++|++++++++++|+++++..++.+...+..++.+....+..+.+.|+++|+++||+|++
T Consensus 214 l~~~~~~~~~~i~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~ 293 (1321)
T 4f4c_A 214 IGMAFQYLSQFITGFIVAFTHSWQLTLVMLAVTPIQALCGFAIAKSMSTFAIRETLRYAKAGKVVEETISSIRTVVSLNG 293 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999989999999999999999999999999999999999999999999999983999998214
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 29999999999984868876998998787899999999999999999999995066648999999999999799999999
Q 000406 551 EDHFAVRYAGLLADSIPFGAKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSL 630 (1560)
Q Consensus 551 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~lv~~g~~t~g~~~~~~~~~~~~~~~l~~l~ 630 (1560)
|+.+.++|.+..++..+...+.....+...++..++.++.+++++|+|.+++..|.+++|.+++++.++..+..++..+.
T Consensus 294 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~~~ 373 (1321)
T 4f4c_A 294 LRYELERYSTAVEEAKKAGVLKGLFLGISFGAMQASNFISFALAFYIGVGWVHDGSLNFGDMLTTFSSVMMGSMALGLAG 373 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 29999999999999999999999999999999999999999999999999999599869999999999999999999899
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCC
Q ss_conf 99999999999999999997019998999977776788866399997999969999865322202674299899985699
Q 000406 631 SYFAQFAQGTVAATRVFEIIDRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTS 710 (1560)
Q Consensus 631 ~~~~~l~~~~~a~~Ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~vsf~y~~~~~~~vL~~isl~i~~G~~~aivG~s 710 (1560)
..+..+..+.++++|++++++.+|+.+.....+....+..|.|+|+||+|+||++++.++|+|+||+|++|+++||||+|
T Consensus 374 ~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~I~~~nvsF~Y~~~~~~~vL~~isl~i~~G~~vaivG~s 453 (1321)
T 4f4c_A 374 PQLAVLGTAQGAASGIYEVLDRKPVIDSSSKAGRKDMKIKGDITVENVHFTYPSRPDVPILRGMNLRVNAGQTVALVGSS 453 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSCCSSCSSSCCCCCCCCCCCEEEEEEEECCSSSTTSCSEEEEEEEECTTCEEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCEEECEEEEECCCCEEEEEECC
T ss_conf 99999999999999999997178534566655656778887679998554079999874333318862288278998058
Q ss_pred CCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99837999999629899964899999526786588773548999047757666689998549987789999999999601
Q 000406 711 GGGKSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASA 790 (1560)
Q Consensus 711 GsGKSTl~~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~~ 790 (1560)
|||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||+|+||||++||+|||.+|+++.+++++++||+.+++
T Consensus 454 GsGKSTll~ll~~~~~~~~G~I~idG~~i~~~~~~~lr~~i~~v~Q~~~Lf~~TI~eNI~~g~~~~~~~~v~~a~~~a~l 533 (1321)
T 4f4c_A 454 GCGKSTIISLLLRYYDVLKGKITIDGVDVRDINLEFLRKNVAVVSQEPALFNCTIEENISLGKEGITREEMVAACKMANA 533 (1321)
T ss_dssp SSCHHHHHHHHTTSSCCSEEEEEETTEETTTSCHHHHHHHEEEECSSCCCCSEEHHHHHHTTCTTCCHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHHHHCCC
T ss_conf 98577888875456516448615799650112599985046665875332078616788641552209999999987565
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC
Q ss_conf 87897099998741289999999689999999998614998799827788999999999999999805996799984595
Q 000406 791 HSFISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRL 870 (1560)
Q Consensus 791 ~~~i~~lp~gl~t~ig~~g~~LSgGQkQrialARAll~~~~iliLDE~ts~lD~~t~~~i~~~l~~~~~~~Tvi~itH~l 870 (1560)
++||+.||+||||.+||+|.+||||||||||||||+|++|+|||||||||+||+++|+.++++|+++.+++|+|+||||+
T Consensus 534 ~~~i~~lp~G~~T~vGe~G~~LSGGQkQRiaiARAl~~~~~IliLDE~tSaLD~~te~~i~~~l~~~~~~~T~iiiaHrl 613 (1321)
T 4f4c_A 534 EKFIKTLPNGYNTLVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESEGIVQQALDKAAKGRTTIIIAHRL 613 (1321)
T ss_dssp HHHHHHSTTTTSSEESSSSCCCCHHHHHHHHHHHHHTTCCSEEEEESTTTTSCTTTHHHHHHHHHHHHTTSEEEEECSCT
T ss_pred HHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCH
T ss_conf 46887088888607558988777778799999998725999899845544688789999999999984798899973638
Q ss_pred CCCCCCCEEEEEECCEEEEECCHHHHHHHCCHHHHHHHHHHHHCCCCC------CCCHHCCCCC-CHHHHH---HHHHHH
Q ss_conf 500127989999198598852703575305327999999874104963------1000000142-100101---347876
Q 000406 871 ATVKNANTIVVLDQGSVVEIGNHRQLLERGGAYHDLVKLASEAVSQPQ------SKQKDAKRGI-EFSIYE---KSVIEV 940 (1560)
Q Consensus 871 ~~i~~~D~I~vl~~G~i~e~G~~~~l~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~~~-~~~~~~---~~~~~~ 940 (1560)
+++.+||+|+||++|+|+|+|+|+||++++|.|+++++.+........ ..+....... +..... ....+.
T Consensus 614 s~i~~aD~Iivl~~G~ive~Gth~eL~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1321)
T 4f4c_A 614 STIRNADLIISCKNGQVVEVGDHRALMAQQGLYYDLVTAQTFTDAVDSAAEGKFSRENSVARQTSEHEGLSRQASEMDDI 693 (1321)
T ss_dssp TTTTTCSEEEEEETTEEEEEECHHHHHTTTCHHHHHHHHHHHHHHHHHHHCC----------------------------
T ss_pred HHHHHCCEEEEEECCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 78986898999639965136899999985327999999622122223323344332232111222223422222221102
Q ss_pred -HHHHHHHHHHHH--HHHHHHHH-----HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf -332112211134--55443588-----7655586420899711038999996314579999999999999999999999
Q 000406 941 -SRSRYANEVSKS--KYFKSMQA-----EIQTVEEEQQKPRPRKFQLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPL 1012 (1560)
Q Consensus 941 -~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ 1012 (1560)
.+.......+.. ........ ......++..........+..++.+.++.+..++++++++++.+++.+.+++
T Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~ 773 (1321)
T 4f4c_A 694 MNRVRSSTIGSITNGPVIDEKEERIGKDALSRLKQELEENNAQKTNLFEILYHARPHALSLFIGMSTATIGGFIYPTYSV 773 (1321)
T ss_dssp ----------------------CCCCCCHHHHHHHTTTTSCCCCCCHHHHHHHTGGGHHHHHHHHHHHHHGGGHHHHHHH
T ss_pred HHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 21110132124567740257775315403899999999707863109999999877899999999999999999999999
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH
Q ss_conf 99999999861021011111789999999999999999999989999999999999999999999807998754556776
Q 000406 1013 ILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENST 1092 (1560)
Q Consensus 1013 ll~~~i~~~~~~~~~~~~~~~~~~~~~~l~l~i~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~~f~~~~~~~ 1092 (1560)
++..++..+..... .......++.+++++++++..++.++..++..+++.++..++|..+|++++++|++||+..++++
T Consensus 774 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~ 852 (1321)
T 4f4c_A 774 FFTSFMNVFAGNPA-DFLSQGHFWALMFLVLAAAQGICSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNAS 852 (1321)
T ss_dssp HHHHHHHHTSSCSS-TTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCH
T ss_pred HHHHHHHHHCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCH
T ss_conf 99999987517934-55667899999999999999999999999999999999999999998887349933321678884
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-HHHHHHHH
Q ss_conf 79999986109999999978999999999999999999999879999999999999999999999971041-33432699
Q 000406 1093 GVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRLTLVAAALTPFTLGASYLSLIINVGP-KIDNSSYA 1171 (1560)
Q Consensus 1093 G~il~rls~Di~~i~~~i~~~i~~~i~~~~~~i~~l~~~~~~~~~lali~l~~~pl~~~~~~~~~~~~~~~-~~~~~~~~ 1171 (1560)
|++++|+++|+..++..++..+..++..++.+++.++++++++|.+++++++++|++++..++........ ........
T Consensus 853 G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 932 (1321)
T 4f4c_A 853 GKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIGLAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFA 932 (1321)
T ss_dssp HHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 88885025059999999999999999986537777022137868999999998889999999999999999999999988
Q ss_pred HHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
Q ss_conf 99989998850106787224159999999999734589998999999778999999999999999999999985086528
Q 000406 1172 KASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASF 1251 (1560)
Q Consensus 1172 ~~~s~~~e~i~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~g~~lv~~g~~s~ 1251 (1560)
+....+.|++.|+++||+|++++.+.+++.+..+...+...+...+.++...+...+..+..++++|+|+.++..+..+.
T Consensus 933 ~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~ 1012 (1321)
T 4f4c_A 933 DSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPHKEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTM 1012 (1321)
T ss_dssp HHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSS
T ss_pred HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 89889999996279888614148899999999999999999999999999999999999999999987578875376542
Q ss_pred HHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCC
Q ss_conf 899--999999999999999987459899999988999999730288544434665678998628998789996999996
Q 000406 1252 GVV--YKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPLIDNVKGRKLERSKPLGIELKMVTFTYPSRPEV 1329 (1560)
Q Consensus 1252 g~l--~~~~~~~~~~~~~l~~l~~~~~~~~~a~~s~~ri~~i~~~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~ 1329 (1560)
+.. +.++.++.+...++..+...+++++.+..+.+|+.++.+.+++.++.......++..+.|+|+||+|+||.+++.
T Consensus 1013 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~g~I~f~nVsf~Y~~~~~~ 1092 (1321)
T 4f4c_A 1013 QPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGGIIFGMLRKISKIDSLSLAGEKKKLYGKVIFKNVRFAYPERPEI 1092 (1321)
T ss_dssp CHHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHHHHHHHHHCCCSSCTTCCCSBCCCCCCCEEEEEEEECCTTSCSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCC
T ss_conf 14789999999987788999999999999999999998999860766577766778788888818999879857999988
Q ss_pred CCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHH
Q ss_conf 30010059995893999995999988899999962568983289999985578898887523188827888997568999
Q 000406 1330 TVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEPALFAGTIRDN 1409 (1560)
Q Consensus 1330 ~vL~nIsl~I~~Ge~vaIVG~SGSGKSTLi~LL~gl~~p~~G~I~IdG~dI~~i~~~~lR~~Ia~VpQd~~LF~gTIreN 1409 (1560)
+||+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+||||||
T Consensus 1093 ~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreN 1172 (1321)
T 4f4c_A 1093 EILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERFYDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAEN 1172 (1321)
T ss_dssp CSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTSSCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHH
T ss_pred CCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHH
T ss_conf 21245169988989999989999819999999956863899789999998654999999854599878997327239999
Q ss_pred HHCCC--CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHH
Q ss_conf 71499--9999999999999992899998099983020028999779579999999999815997899857885879999
Q 000406 1410 IALGN--PKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLES 1487 (1560)
Q Consensus 1410 I~~g~--~~~sd~eI~~al~~a~l~d~I~~LP~GldT~Ige~G~~LSGGQkQRLaLARALL~~p~ILILDEaTSaLD~~t 1487 (1560)
|++|. +++++++|++||+.++++|||.+||+||||.|||+|.+|||||||||||||||+++|+|||||||||+||++|
T Consensus 1173 I~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~GldT~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~t 1252 (1321)
T 4f4c_A 1173 IIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFETRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTES 1252 (1321)
T ss_dssp HSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTCSEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHH
T ss_pred HHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHH
T ss_conf 74549999999999999999829849997176789998238891569999999999999971799899968111578999
Q ss_pred HHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 999999999834896599982695778623889999699797835988899521582999999996421
Q 000406 1488 EKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETLLASHLNGVYASLVRAETEA 1556 (1560)
Q Consensus 1488 E~~I~~~L~~~~~~~TVIvIaHRlsti~~aDrIiVL~~G~Ive~Gt~~eLl~~~~~g~y~~l~~~q~~~ 1556 (1560)
|+.|+++|++.+++||+|+||||++|+++||+|+||++|+|+|+|+|+|||+ ++|.|++||+.|...
T Consensus 1253 E~~Iq~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vld~G~IvE~Gth~eLl~--~~g~y~~L~~~Q~~e 1319 (1321)
T 4f4c_A 1253 EKVVQEALDRAREGRTCIVIAHRLNTVMNADCIAVVSNGTIIEKGTHTQLMS--EKGAYYKLTQKQMTE 1319 (1321)
T ss_dssp HHHHHHHHTTTSSSSEEEEECSSSSTTTTCSEEEEESSSSEEEEECHHHHHH--CC-------------
T ss_pred HHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEEECCEEEEECCHHHHHH--CCCHHHHHHHHHHHC
T ss_conf 9999999999739998999606899999699999998989999888899984--980999999999850
No 2
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=1563.61 Aligned_cols=1226 Identities=38% Similarity=0.653 Sum_probs=1046.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC------CCCC-------HHHHHHHHHH
Q ss_conf 37521999989850256799999999999999677799999999999870379------9970-------4554477999
Q 000406 327 AKPVGLFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANES------SDPD-------KTQMMKDAEK 393 (1560)
Q Consensus 327 ~~~~~~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~------~~~~-------~~~~~~~~~~ 393 (1560)
.....++.+++|..+..++.++++++++++.+++.|+++++++.+++.+.... .... .......+..
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (1284)
T 3g5u_A 30 KPAVSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTT 109 (1284)
T ss_dssp ---CTTHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCSHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 66656999998726579999999999999999999999999999999986134443322222211111002446889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999999999999999999984590001037895699999999999999999999999
Q 000406 394 ICLLMTVLAAIVMMGAYLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAH 473 (1560)
Q Consensus 394 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~l~ffd~~~~~G~i~sr~s~Di~~i~~~l~~~l~~ 473 (1560)
+++++++++++..++.+++.+++.+.+++...++|.++|++++++|++|||+. ++|++++|+++|++.+++.++..+..
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l~~~~~~~f~~~-~~G~l~sr~~~D~~~i~~~~~~~~~~ 188 (1284)
T 3g5u_A 110 YAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVH-DVGELNTRLTDDVSKINEGIGDKIGM 188 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTHHHHSC-CSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999986998997568-87789999998899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 99999999999999998978999999999999999999999999999899999999999999999945999998352299
Q 000406 474 FAHNIFTFICGYTVGFLRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDH 553 (1560)
Q Consensus 474 ~i~~i~~~i~~~ii~~~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIkaf~~e~~ 553 (1560)
++..++++++.++++++.+|++++++++++|+++++..++.+...+..++.++..++..+.+.|+++|+++||+|++|+.
T Consensus 189 ~~~~~~~~i~~~~~~~~~~~~l~l~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~~ikaf~~e~~ 268 (1284)
T 3g5u_A 189 FFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKK 268 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCHHHHHTTCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHH
T ss_conf 99999999999999999989999999999999999999999999999999999999999999999978799998465399
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999984868876998998787899999999999999999999995066648999999999999799999999999
Q 000406 554 FAVRYAGLLADSIPFGAKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYF 633 (1560)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~lv~~g~~t~g~~~~~~~~~~~~~~~l~~l~~~~ 633 (1560)
+.++|.+..++..+...+.....+...++..++.++.+++++|+|++++..|.+++|.++++++++.....++..+...+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 348 (1284)
T 3g5u_A 269 ELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLTVFFSVLIGAFSVGQASPNI 348 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999999999299889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCCCCC
Q ss_conf 99999999999999997019998999977776788866399997999969999865322202674299899985699998
Q 000406 634 AQFAQGTVAATRVFEIIDRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGG 713 (1560)
Q Consensus 634 ~~l~~~~~a~~Ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~vsf~y~~~~~~~vL~~isl~i~~G~~~aivG~sGsG 713 (1560)
..++.+.++++|++++++.+|+.++....+..+++..|.|+++||+|+|+++++.++|+|+||+|++|+++||||+||||
T Consensus 349 ~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~vL~~isl~i~~G~~~~ivG~sGsG 428 (1284)
T 3g5u_A 349 EAFANARGAAYEVFKIIDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCG 428 (1284)
T ss_dssp HHHHHHHHHHHHHHHTTSCCCCCSSCCSSCCCCTTCCCCEEEEEEEECCSSTTSCCSEEEEEEEECTTCEEEEECCSSSS
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCEECCEEEECCCCEEEEECCCCCC
T ss_conf 99999999999999997289867766656777777777189999899769999871012545897599889998999997
Q ss_pred HHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 37999999629899964899999526786588773548999047757666689998549987789999999999601878
Q 000406 714 KSTVFALIERFYDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSF 793 (1560)
Q Consensus 714 KSTl~~ll~g~~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~~~~~ 793 (1560)
||||+++|+|+|+|++|+|.+||.|++.++.+++|++|+||+|+|++|++||+|||.+|.++.++++++++++.++++++
T Consensus 429 KSTl~~ll~g~~~~~~G~i~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~g~~~~~~~~~~~~~~~~~~~~~ 508 (1284)
T 3g5u_A 429 KSTTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENIRYGREDVTMDEIEKAVKEANAYDF 508 (1284)
T ss_dssp HHHHHHHTTTSSCCSEEEEEETTEEGGGSCHHHHHHHEEEECSSCCCCSSCHHHHHHHHCSSCCHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHCCCCCCCEEEEECCEEHHHCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHH
T ss_conf 99999998078899973899999987757999998654898688753776699997457989999999999998296999
Q ss_pred HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCC
Q ss_conf 97099998741289999999689999999998614998799827788999999999999999805996799984595500
Q 000406 794 ISELPLGYDTQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATV 873 (1560)
Q Consensus 794 i~~lp~gl~t~ig~~g~~LSgGQkQrialARAll~~~~iliLDE~ts~lD~~t~~~i~~~l~~~~~~~Tvi~itH~l~~i 873 (1560)
+..+|+|++|.+|++|.+||||||||+|||||++++|+|||||||||+||+++++.+++.++...+++|+|+||||++++
T Consensus 509 i~~l~~g~~t~~~~~g~~LSgGq~QriaiARal~~~p~iliLDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~i 588 (1284)
T 3g5u_A 509 IMKLPHQFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTV 588 (1284)
T ss_dssp HHHSTTGGGCCCSSSSCSSCHHHHHHHHHHHHHHHCCSEEEEESTTCSSCHHHHHHHHHHHHHHHTTSEEEEECSCHHHH
T ss_pred HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHH
T ss_conf 97465633450147878659999999999999952999899979877779999999999999973999899994077899
Q ss_pred CCCCEEEEEECCEEEEECCHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHCCC-CCC-HHHHHHH-HHHHHHHHHHHHHH
Q ss_conf 12798999919859885270357530532799999987410496310000001-421-0010134-78763321122111
Q 000406 874 KNANTIVVLDQGSVVEIGNHRQLLERGGAYHDLVKLASEAVSQPQSKQKDAKR-GIE-FSIYEKS-VIEVSRSRYANEVS 950 (1560)
Q Consensus 874 ~~~D~I~vl~~G~i~e~G~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~-~~~~~~~~~~~~~~ 950 (1560)
..||+|++|++|+++|.|+|++|+++++.|++++..+................ ... ....... .....+... .
T Consensus 589 ~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 664 (1284)
T 3g5u_A 589 RNADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQTAGNEIELGNEACKSKDEIDNLDMSSKDSGSSLIRRRS----T 664 (1284)
T ss_dssp TTCSEEEECSSSCCCCEECHHHHHHTTSHHHHHHHHTC------------------------------------------
T ss_pred HCCCEEEEEECCEEEEECCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC----C
T ss_conf 749989999899999978899998678779999997430022111333333222223443333333320003454----3
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HHH
Q ss_conf 3455443588765558642089971103899999631457999999999999999999999999999999861021-011
Q 000406 951 KSKYFKSMQAEIQTVEEEQQKPRPRKFQLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTA-STL 1029 (1560)
Q Consensus 951 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ll~~~i~~~~~~~~-~~~ 1029 (1560)
..........+.....++..........+..++++.++.++.+++++++.++.+++.+.++++++.+++.+..... ...
T Consensus 665 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 744 (1284)
T 3g5u_A 665 RKSICGPHDQDRKLSTKEALDEDVPPASFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQ 744 (1284)
T ss_dssp -------------------CCCCCSCCCTTHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTTHH
T ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_conf 33445642233211024555313662589999998451579999999999999999999999999999998556850336
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 11178999999999999999999998999999999999999999999980799875455677679999986109999999
Q 000406 1030 RRDVRYLSLALVGLGFGCIIFMTGQQGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSV 1109 (1560)
Q Consensus 1030 ~~~~~~~~~~~l~l~i~~~i~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~~f~~~~~~~G~il~rls~Di~~i~~~ 1109 (1560)
......+.+++++++++..++.....++..+.+.++..++|..+|++++++|+.||+..++++|++++|+++|+..++..
T Consensus 745 ~~~~~~~~~~~~~l~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~ 824 (1284)
T 3g5u_A 745 RQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGA 824 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 77999999999999999999999999999999999999999999999983998887578998899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHCCHHHHH
Q ss_conf 978999999999999999999999879999999999999999999999971041-3343269999989998850106787
Q 000406 1110 LGDRFSVLLMGLSSAAVGLGVSLVLNWRLTLVAAALTPFTLGASYLSLIINVGP-KIDNSSYAKASSIASGAVSNIRTVT 1188 (1560)
Q Consensus 1110 i~~~i~~~i~~~~~~i~~l~~~~~~~~~lali~l~~~pl~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~~e~i~gi~tIr 1188 (1560)
+...+..++..+..+++.+++++.++|.+++++++++|+++++.++........ .............+.|++.|+++||
T Consensus 825 ~~~~l~~~~~~~~~~~~~~i~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~ 904 (1284)
T 3g5u_A 825 TGSRLAVIFQNIANLGTGIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVV 904 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999996999999999999999999999999999999999999999999999998899999
Q ss_pred HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 22415999999999973458999899999977899999999999999999999998508652889999999999999999
Q 000406 1189 TFSAQEQIINSFDKALSEPKKKSVKRSQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSV 1268 (1560)
Q Consensus 1189 af~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~g~~lv~~g~~s~g~l~~~~~~~~~~~~~l 1268 (1560)
+|++++.+.+++.+..+...+...+...+.+...++.+.+.++.+++.+|+|++++..|.++++.++.++.++.....++
T Consensus 905 a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~ 984 (1284)
T 3g5u_A 905 SLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAV 984 (1284)
T ss_dssp TCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHH
T ss_pred HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 84659999999999999999999999999999999999999999999999999999909806999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-CCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEE
Q ss_conf 9987459899999988999999730288544434-665678998628998789996999996300100599958939999
Q 000406 1269 GQLAGLAPDTSMAATAIPAVLQITKRKPLIDNVK-GRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVAL 1347 (1560)
Q Consensus 1269 ~~l~~~~~~~~~a~~s~~ri~~i~~~~~~~~~~~-~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~nIsl~I~~Ge~vaI 1347 (1560)
..+....+.+..+..+..|+.++.+.+++..... ....+++..+.|+|+||+|+|+..++.++|+|+||+|++||++||
T Consensus 985 ~~~~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~i 1064 (1284)
T 3g5u_A 985 GQVSSFAPDYAKATVSASHIIRIIEKTPEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLAL 1064 (1284)
T ss_dssp HHHTSSSCCSTHHHHHHHHHHHHHHSCCSSSSCCSSCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEE
T ss_conf 99999999999999999999999838876666555665456777857999989977999987002030599769988999
Q ss_pred ECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCC--CCCHHHHHHH
Q ss_conf 95999988899999962568983289999985578898887523188827888997568999714999--9999999999
Q 000406 1348 VGGSGSGKSTVIWLIQRFYDPNQGKVMIEGVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNP--KASWAEIEEA 1425 (1560)
Q Consensus 1348 VG~SGSGKSTLi~LL~gl~~p~~G~I~IdG~dI~~i~~~~lR~~Ia~VpQd~~LF~gTIreNI~~g~~--~~sd~eI~~a 1425 (1560)
||+||||||||+++|+|+|+|++|+|.+||+|++.++.+++|++|+||||||.+|++||+|||.++.+ ..++++++++
T Consensus 1065 vG~sGsGKSTl~~~l~g~~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~ 1144 (1284)
T 3g5u_A 1065 VGSSGCGKSTVVQLLERFYDPMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRA 1144 (1284)
T ss_dssp ECSSSTTHHHHHHHHTTSSCCSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHCCCCCCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHH
T ss_conf 88999978999999946867899779899998000789999702689877874066669999746687789999999999
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE
Q ss_conf 99992899998099983020028999779579999999999815997899857885879999999999999834896599
Q 000406 1426 AEEAYIHKFISSLPQGYETQVGESGVQLSGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTI 1505 (1560)
Q Consensus 1426 l~~a~l~d~I~~LP~GldT~Ige~G~~LSGGQkQRLaLARALL~~p~ILILDEaTSaLD~~tE~~I~~~L~~~~~~~TVI 1505 (1560)
++.+++++++.++|+||||.|||+|.+||||||||+||||||+++|+|||||||||+||+++++.|++.|++..+++|+|
T Consensus 1145 ~~~~~~~~~i~~l~~gldt~vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~tvi 1224 (1284)
T 3g5u_A 1145 AKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCI 1224 (1284)
T ss_dssp HHHHTCHHHHSSTTTGGGCBCSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSSCEE
T ss_pred HHHHCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEE
T ss_conf 99839599997270424561178889338999999999999974999999868755579999999999999867999899
Q ss_pred EEECCHHHHHHCCEEEEEECCEEEEECCHHHHHHHCCCHHHHHHHHHHHHHCCC
Q ss_conf 982695778623889999699797835988899521582999999996421028
Q 000406 1506 VVAHRLSTIREANMIAVVRDGAVVEYGSHETLLASHLNGVYASLVRAETEANAF 1559 (1560)
Q Consensus 1506 vIaHRlsti~~aDrIiVL~~G~Ive~Gt~~eLl~~~~~g~y~~l~~~q~~~~~~ 1559 (1560)
+||||++++..||||+||++|+|+|.|+|++|++ ++|.|++||+.|.....|
T Consensus 1225 ~isH~l~~i~~~dri~vl~~G~i~~~g~~~~l~~--~~g~y~~l~~~q~~~~~~ 1276 (1284)
T 3g5u_A 1225 VIAHRLSTIQNADLIVVIQNGKVKEHGTHQQLLA--QKGIYFSMVSVQAGAKRS 1276 (1284)
T ss_dssp EECSCTTGGGSCSEEEEEETBEEEEEECHHHHHH--SCSHHHHHHHHHC-----
T ss_pred EEECCHHHHHCCCEEEEEECCEEEEECCHHHHHH--CCCHHHHHHHHHHHCCCC
T ss_conf 9955879998099899998998999778999984--777799999997613222
No 3
>4f4c_A Multidrug resistance protein PGP-1; ABC transporter, ATPase, multi-drug transporter, exporter, A binding, hydrolase,protein transport; HET: NDG NAG BMA MAN 0SA; 3.40A {Caenorhabditis elegans}
Probab=1.00 E-value=1 Score=850.55 Aligned_cols=578 Identities=35% Similarity=0.596 Sum_probs=511.3
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 75219999898502567999999999999996777999999999998703799970455447799999999999999999
Q 000406 328 KPVGLFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMM 407 (1560)
Q Consensus 328 ~~~~~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 407 (1560)
....++.++++.++ .++.++++++++++.+++.|.++++++.+++.+...... ......+|++++++++++..+
T Consensus 736 ~~~~~~~~~~~~~~-~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~~~i 809 (1321)
T 4f4c_A 736 QKTNLFEILYHARP-HALSLFIGMSTATIGGFIYPTYSVFFTSFMNVFAGNPAD-----FLSQGHFWALMFLVLAAAQGI 809 (1321)
T ss_dssp CCCCHHHHHHHTGG-GHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHTSSCSST-----TTTTHHHHHHHHHHHHHHHHH
T ss_pred CCEEHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH-----HHHHHHHHHHHHHHHHHHHHH
T ss_conf 63109999999877-899999999999999999999999999999875179345-----566789999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999998459000103-78956999999999999999999999999999999999999
Q 000406 408 GAYLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDT-EVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYT 486 (1560)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~l~ffd~-~~~~G~i~sr~s~Di~~i~~~l~~~l~~~i~~i~~~i~~~i 486 (1560)
+.++..+++.+.+.++..++|.++|++++++|++|||. ++++|+++||+++|++.+++.++..+..++..++.+++.++
T Consensus 810 ~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~~~ffd~~~~~~G~i~~r~s~D~~~i~~~l~~~l~~~~~~~~~~i~~~~ 889 (1321)
T 4f4c_A 810 CSFLMTFFMGIASESLTRDLRNKLFRNVLSQHIGFFDSPQNASGKISTRLATDVPNLRTAIDFRFSTVITTLVSMVAGIG 889 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSTTSGGGCHHHHHHHHHTHHHHHHTTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
T ss_conf 99999999999999999999999988873499333216788848888502505999999999999999998653777702
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 99989789999999999999999999999999998999999999999999999459999983522999999999998486
Q 000406 487 VGFLRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSI 566 (1560)
Q Consensus 487 i~~~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIkaf~~e~~~~~~~~~~~~~~~ 566 (1560)
++++.+|++++++++++|++++...++.+.......+..+...+....+.|++.|+++||+|++|+.+.+++.+..+...
T Consensus 890 ~~~~~~~~l~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~ 969 (1321)
T 4f4c_A 890 LAFFYGWQMALLIIAILPIVAFGQYLRGRRFTGKNVKSASEFADSGKIAIEAIENVRTVQALAREDTFYENFCEKLDIPH 969 (1321)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHTSCCSSCSTTTSSHHHHHHHHHHHHHHTHHHHHHTTTHHHHHHHHHHHHHHHH
T ss_pred EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
T ss_conf 21378689999999988899999999999999999999999888988999999627988861414889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8876998998787899999999999999999999995066648--99999999999979999999999999999999999
Q 000406 567 PFGAKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSG--GAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAAT 644 (1560)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~lv~~g~~t~--g~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~a~~ 644 (1560)
+...+.....+...++...+.++..++++|+|+.++..+..+. +.++.++.++.....++..+...+..++.+..+++
T Consensus 970 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~ 1049 (1321)
T 4f4c_A 970 KEAIKEAFIQGLSYGCASSVLYLLNTCAYRMGLALIITDPPTMQPMRVLRVMYAITISTSTLGFATSYFPEYAKATFAGG 1049 (1321)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTSSSSCSSCHHHHHHHHHHHHTTTSSTTGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999875788753765421478999999998778899999999999999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCC
Q ss_conf 99999701999899997777678886639999799996999986532220267429989998569999837999999629
Q 000406 645 RVFEIIDRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERF 724 (1560)
Q Consensus 645 Ri~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~vsf~y~~~~~~~vL~~isl~i~~G~~~aivG~sGsGKSTl~~ll~g~ 724 (1560)
|++++++.+++.++... ....++..|.|+|+||+|+||.+++.++|+|+||+|+|||++||||+||||||||+++|+|+
T Consensus 1050 ri~~~l~~~~~~~~~~~-~~~~~~~~g~I~f~nVsf~Y~~~~~~~VL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl 1128 (1321)
T 4f4c_A 1050 IIFGMLRKISKIDSLSL-AGEKKKLYGKVIFKNVRFAYPERPEIEILKGLSFSVEPGQTLALVGPSGCGKSTVVALLERF 1128 (1321)
T ss_dssp HHHHHHHCCCSSCTTCC-CSBCCCCCCCEEEEEEEECCTTSCSSCSEEEEEEEECTTCEEEEECSTTSSTTSHHHHHTTS
T ss_pred HHHHHHHCCCCCCCCCC-CCCCCCCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf 89998607665777667-78788888818999879857999988212451699889899999899998199999999568
Q ss_pred CCCCCCEEEECCEECCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHCCC--CCCCHHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 8999648999995267865887735489990477576666899985499--87789999999999601878970999987
Q 000406 725 YDPTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGK--ENATMKEAVAACKAASAHSFISELPLGYD 802 (1560)
Q Consensus 725 ~~~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~eNi~~~~--~~~~~~~i~~a~~~~~~~~~i~~lp~gl~ 802 (1560)
|+|++|+|.+||+|+++++++++|++|++|||||+||+|||||||.+|. ++.+++++++||+.+++++||++||+|||
T Consensus 1129 ~~p~~G~I~iDG~di~~i~~~~lR~~i~~V~Qdp~LF~gTIreNI~~gld~~~~sd~ei~~Al~~a~l~~~I~~Lp~Gld 1208 (1321)
T 4f4c_A 1129 YDTLGGEIFIDGSEIKTLNPEHTRSQIAIVSQEPTLFDCSIAENIIYGLDPSSVTMAQVEEAARLANIHNFIAELPEGFE 1208 (1321)
T ss_dssp SCCSSSEEEETTEETTTBCHHHHHTTEEEECSSCCCCSEEHHHHHSSSSCTTTSCHHHHHHHHHHTTCHHHHHTSTTTTC
T ss_pred CCCCCCEEEECCEEHHHCCHHHHHHHEEEECCCCEEECCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCC
T ss_conf 63899789999998654999999854599878997327239999745499999999999999998298499971767899
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEE
Q ss_conf 41289999999689999999998614998799827788999999999999999805996799984595500127989999
Q 000406 803 TQVGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVL 882 (1560)
Q Consensus 803 t~ig~~g~~LSgGQkQrialARAll~~~~iliLDE~ts~lD~~t~~~i~~~l~~~~~~~Tvi~itH~l~~i~~~D~I~vl 882 (1560)
|.+||+|.+||||||||||||||++++|+|||||||||+||++||+.|+++|++.+++||+|+||||++++.+||+|+||
T Consensus 1209 T~vge~G~~LSgGQrQriaiARAllr~~~ILiLDEaTSaLD~~tE~~Iq~~l~~~~~~~TvI~IAHRLsTi~~aD~I~Vl 1288 (1321)
T 4f4c_A 1209 TRVGDRGTQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESEKVVQEALDRAREGRTCIVIAHRLNTVMNADCIAVV 1288 (1321)
T ss_dssp SEETTTSCSSCHHHHHHHHHHHHHHSCCSEEEEESCCCSTTSHHHHHHHHHHTTTSSSSEEEEECSSSSTTTTCSEEEEE
T ss_pred CEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCEEEEE
T ss_conf 98238891569999999999999971799899968111578999999999999973999899960689999969999999
Q ss_pred ECCEEEEECCHHHHHHHCCHHHHHHHHHHH
Q ss_conf 198598852703575305327999999874
Q 000406 883 DQGSVVEIGNHRQLLERGGAYHDLVKLASE 912 (1560)
Q Consensus 883 ~~G~i~e~G~~~~l~~~~~~~~~l~~~~~~ 912 (1560)
++|+|+|.|+|+||++++|.|++|++.|..
T Consensus 1289 d~G~IvE~Gth~eLl~~~g~y~~L~~~Q~~ 1318 (1321)
T 4f4c_A 1289 SNGTIIEKGTHTQLMSEKGAYYKLTQKQMT 1318 (1321)
T ss_dssp SSSSEEEEECHHHHHHCC------------
T ss_pred ECCEEEEECCHHHHHHCCCHHHHHHHHHHH
T ss_conf 898999988889998498099999999985
No 4
>3g5u_A MCG1178, multidrug resistance protein 1A; P-glycoprotein, PGP, cyclic peptide, membrane protein; 3.80A {Mus musculus} PDB: 3g61_A* 3g60_A*
Probab=1.00 E-value=1 Score=775.84 Aligned_cols=581 Identities=37% Similarity=0.640 Sum_probs=517.6
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 75219999898502567999999999999996777999999999998703799970455447799999999999999999
Q 000406 328 KPVGLFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMM 407 (1560)
Q Consensus 328 ~~~~~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 407 (1560)
....+++++++.++. ++.++++++++++.+++.|..+++++.+++.+....... ........++.++++++++..+
T Consensus 689 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~~~~~~l~i~~~~ 764 (1284)
T 3g5u_A 689 PPASFWRILKLNSTE-WPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPE---TQRQNSNLFSLLFLILGIISFI 764 (1284)
T ss_dssp SCCCTTHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSTT---HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH---HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 625899999984515-799999999999999999999999999999985568503---3677999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999998459000103-78956999999999999999999999999999999999999
Q 000406 408 GAYLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDT-EVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYT 486 (1560)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~l~ffd~-~~~~G~i~sr~s~Di~~i~~~l~~~l~~~i~~i~~~i~~~i 486 (1560)
..++..+++.+.++++..++|.+++++++++|++|||. ++++|++++|+++|++.++..++..+..++..++.+++.++
T Consensus 765 ~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ff~~~~~~~G~l~~rl~~D~~~i~~~~~~~l~~~~~~~~~~~~~~i 844 (1284)
T 3g5u_A 765 TFFLQGFTFGKAGEILTKRLRYMVFKSMLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGTGII 844 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHSCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999998399888757899889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Q ss_conf 99989789999999999999999999999999998999999999999999999459999983522999999999998486
Q 000406 487 VGFLRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSI 566 (1560)
Q Consensus 487 i~~~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIkaf~~e~~~~~~~~~~~~~~~ 566 (1560)
++++++|.+++++++++|+++++..++.+.......+...........+.|+++|+++||+|++|+.+.++|.+..+...
T Consensus 845 ~~~~~~~~l~lv~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ti~a~~~e~~~~~~~~~~~~~~~ 924 (1284)
T 3g5u_A 845 ISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPY 924 (1284)
T ss_dssp HHHSSCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTTTTCSSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 99999699999999999999999999999999999999999999999999999889999984659999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 88769989987878999999999999999999999950666489999999999997999999999999999999999999
Q 000406 567 PFGAKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRV 646 (1560)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~lv~~g~~t~g~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~a~~Ri 646 (1560)
+...+.....+...++...+.++.+++++|+|.+++..+.++.+.++.++.++.....++..+...+..+..+..+++|+
T Consensus 925 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri 1004 (1284)
T 3g5u_A 925 RNAMKKAHVFGITFSFTQAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKATVSASHI 1004 (1284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSSCSCSTTHHHHHHHHHHHHHHHHHHTSSSCCSTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999990980699999999999999999999999999999999999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCC
Q ss_conf 99970199989999777767888663999979999699998653222026742998999856999983799999962989
Q 000406 647 FEIIDRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYD 726 (1560)
Q Consensus 647 ~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~vsf~y~~~~~~~vL~~isl~i~~G~~~aivG~sGsGKSTl~~ll~g~~~ 726 (1560)
+++++.+|+.+........+++..|.|+++||+|+|+.+++.++|+|+||+|++||++||||+||||||||+++|+|+++
T Consensus 1005 ~~~l~~~~~~~~~~~~~~~~~~~~g~i~~~~v~~~y~~~~~~~~l~~vsl~i~~Ge~v~ivG~sGsGKSTl~~~l~g~~~ 1084 (1284)
T 3g5u_A 1005 IRIIEKTPEIDSYSTQGLKPNMLEGNVQFSGVVFNYPTRPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYD 1084 (1284)
T ss_dssp HHHHHSCCSSSSCCSSCCCTTTTSCCEEEEEEEBCCSCGGGCCSBSSCCEEECSSSEEEEECSSSTTHHHHHHHHTTSSC
T ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 99983887666655566545677785799998997799998700203059976998899988999978999999946867
Q ss_pred CCCCEEEECCEECCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHCCCC--CCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 996489999952678658877354899904775766668999854998--778999999999960187897099998741
Q 000406 727 PTKGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKE--NATMKEAVAACKAASAHSFISELPLGYDTQ 804 (1560)
Q Consensus 727 ~~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~eNi~~~~~--~~~~~~i~~a~~~~~~~~~i~~lp~gl~t~ 804 (1560)
|++|+|.+||.|++.++.+++|++++||||+|.+|++||+|||.++.+ ..++++++++++.+++++++..+|+||||.
T Consensus 1085 p~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~l~~~ti~eNi~~~~~~~~~~~~~i~~~~~~~~~~~~i~~l~~gldt~ 1164 (1284)
T 3g5u_A 1085 PMAGSVFLDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEIVRAAKEANIHQFIDSLPDKYNTR 1164 (1284)
T ss_dssp CSEEEEESSSSCTTSSCHHHHTTSCEEEESSCCCCSSBHHHHHTCCCSSCCCCHHHHHHHHHHHTCHHHHSSTTTGGGCB
T ss_pred CCCCEEEECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCC
T ss_conf 89977989999800078999970268987787406666999974668778999999999999839599997270424561
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEEC
Q ss_conf 28999999968999999999861499879982778899999999999999980599679998459550012798999919
Q 000406 805 VGDRGTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQ 884 (1560)
Q Consensus 805 ig~~g~~LSgGQkQrialARAll~~~~iliLDE~ts~lD~~t~~~i~~~l~~~~~~~Tvi~itH~l~~i~~~D~I~vl~~ 884 (1560)
+|++|.+||||||||+|||||++++|+|||||||||+||+++++.+++.+++..+++|+|+||||++++..||+|+||++
T Consensus 1165 vge~G~~LSgGq~Qrv~iARal~~~p~iLiLDEpTs~lD~~~~~~i~~~l~~~~~~~tvi~isH~l~~i~~~dri~vl~~ 1244 (1284)
T 3g5u_A 1165 VGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQN 1244 (1284)
T ss_dssp CSTTSCSSCHHHHHHHHHHHHHHHCCSSEEEESCSSSCCHHHHHHHHHHHHHHSSSSCEEEECSCTTGGGSCSEEEEEET
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEEC
T ss_conf 17888933899999999999997499999986875557999999999999986799989999558799980998999989
Q ss_pred CEEEEECCHHHHHHHCCHHHHHHHHHHH
Q ss_conf 8598852703575305327999999874
Q 000406 885 GSVVEIGNHRQLLERGGAYHDLVKLASE 912 (1560)
Q Consensus 885 G~i~e~G~~~~l~~~~~~~~~l~~~~~~ 912 (1560)
|+++|.|+|++|++++|.|++|++.+..
T Consensus 1245 G~i~~~g~~~~l~~~~g~y~~l~~~q~~ 1272 (1284)
T 3g5u_A 1245 GKVKEHGTHQQLLAQKGIYFSMVSVQAG 1272 (1284)
T ss_dssp BEEEEEECHHHHHHSCSHHHHHHHHHC-
T ss_pred CEEEEECCHHHHHHCCCHHHHHHHHHHH
T ss_conf 9899977899998477779999999761
No 5
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=739.94 Aligned_cols=568 Identities=25% Similarity=0.361 Sum_probs=493.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99989850256799999999999999677799999999999870379997045544779999999999999999999999
Q 000406 333 FSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYLE 412 (1560)
Q Consensus 333 ~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 412 (1560)
+.+++|.+++ ++.+++++++.++.+++.+..+++++.++|...... + ...+..++.+++++.++..++.++.
T Consensus 12 ~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (587)
T 3qf4_A 12 KTLARYLKPY-WIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARG---D----FSLVLKTGILMLIVALIGAVGGIGC 83 (587)
T ss_dssp CCGGGGTGGG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT---C----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---C----HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999-999999999999999999999999999999987369---8----7999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999845900010378956999999999999999999999999999999999999999897
Q 000406 413 ITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLRS 492 (1560)
Q Consensus 413 ~~~~~~~~~~~~~~lr~~l~~~il~~~l~ffd~~~~~G~i~sr~s~Di~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~s 492 (1560)
.++..+.+++...++|.+++++++++|+.||++. ++|++++|+++|++.+++.+...+..++..++.+++.+++++.++
T Consensus 84 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~-~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 162 (587)
T 3qf4_A 84 TVFASYASQNFGADLRRDLFRKVLSFSISNVNRF-HTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSIN 162 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHS-CHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999978897997658-889999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999999999998999999999999999999459999983522999999999998486887699
Q 000406 493 WKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAKL 572 (1560)
Q Consensus 493 ~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIkaf~~e~~~~~~~~~~~~~~~~~~~~~ 572 (1560)
|.+++++++++|+++++..++.+...+..++..+...+..+.+.|+++|+++||+|++|+.+.++|.+..++..+...+.
T Consensus 163 ~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 242 (587)
T 3qf4_A 163 VKLSSVLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISA 242 (587)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999998559999986214999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf 89987878999999999999999999999950666489999999999997999999999999999999999999999701
Q 000406 573 GFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIIDR 652 (1560)
Q Consensus 573 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~lv~~g~~t~g~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~a~~Ri~~~l~~ 652 (1560)
....+....+..++..+..++++|+|++++..|.+++|.+++++.+...+..++..+...+..+.++..+++|+.++++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~ 322 (587)
T 3qf4_A 243 FSLIVFALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNE 322 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999999999999999999999984993899999999999999999999999999999999999999999768
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
Q ss_conf 99989999777767888663999979999699998653222026742998999856999983799999962989996489
Q 000406 653 VPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGLI 732 (1560)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~g~i~~~~vsf~y~~~~~~~vL~~isl~i~~G~~~aivG~sGsGKSTl~~ll~g~~~~~~G~I 732 (1560)
+++.++. ......++..+.|+++||+|+|+.. +.++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|
T Consensus 323 ~~~~~~~-~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i 400 (587)
T 3qf4_A 323 KPAIEEA-DNALALPNVEGSVSFENVEFRYFEN-TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRV 400 (587)
T ss_dssp CCSCCCC-TTCBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEE
T ss_pred CCCCCCC-CCCCCCCCCCCCEEEEEEEEECCCC-CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
T ss_conf 9765788-7765668888807997889984899-9764211179986998899989999979999999927866998679
Q ss_pred EECCEECCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99995267865887735489990477576666899985499877899999999996018789709999874128999999
Q 000406 733 TLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQL 812 (1560)
Q Consensus 733 ~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~~~~~i~~lp~gl~t~ig~~g~~L 812 (1560)
.+||.|+++++.+++|++++||+|+|++|++||+|||.++.+..+++++.++++.+++++++..+|+|++|.++++|.+|
T Consensus 401 ~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~L 480 (587)
T 3qf4_A 401 EVDELDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNF 480 (587)
T ss_dssp EESSSBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSS
T ss_pred EECCEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCC
T ss_conf 89999834078999984138977898676755999985248899999999999996849999756531212751898992
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECC
Q ss_conf 96899999999986149987998277889999999999999998059967999845955001279899991985988527
Q 000406 813 SGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIGN 892 (1560)
Q Consensus 813 SgGQkQrialARAll~~~~iliLDE~ts~lD~~t~~~i~~~l~~~~~~~Tvi~itH~l~~i~~~D~I~vl~~G~i~e~G~ 892 (1560)
|||||||++||||++++|+|||||||||+||+++++.+++.++++.+++|+|+||||++.+..||+|++|++|+++|.|+
T Consensus 481 SgGqrQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~ 560 (587)
T 3qf4_A 481 SGGQKQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGT 560 (587)
T ss_dssp CHHHHHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEEC
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECC
T ss_conf 99999999999999729999999797544799999999999998679998999822768898199899998998999788
Q ss_pred HHHHHHHCCHHHHHHHHHH
Q ss_conf 0357530532799999987
Q 000406 893 HRQLLERGGAYHDLVKLAS 911 (1560)
Q Consensus 893 ~~~l~~~~~~~~~l~~~~~ 911 (1560)
|+|+++.++.|++++..+.
T Consensus 561 ~~el~~~~~~~~~~~~~~~ 579 (587)
T 3qf4_A 561 HKELLEHCKPYREIYESQF 579 (587)
T ss_dssp HHHHHHHCHHHHHHHHHHC
T ss_pred HHHHHHCCCHHHHHHHHHH
T ss_conf 9999867839999999984
No 6
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=736.41 Aligned_cols=571 Identities=28% Similarity=0.430 Sum_probs=509.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 52199998985025679999999999999967779999999999987037999704554477999999999999999999
Q 000406 329 PVGLFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMG 408 (1560)
Q Consensus 329 ~~~~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 408 (1560)
...+.++++|.++. ++.++++++++++.+++.+..+++++.++|.+..... ...+..++.+++++.++..++
T Consensus 22 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 93 (598)
T 3qf4_B 22 TATLRRLLGYLRPH-TFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRR-------FDLLPRYMLILGTIYALTSLL 93 (598)
T ss_dssp HHHHHHHGGGTGGG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC-------GGGHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-------HHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999-9999999999999999999999999999999973688-------899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999999984590001037895699999999999999999999999999999999999999
Q 000406 409 AYLEITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVG 488 (1560)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~lr~~l~~~il~~~l~ffd~~~~~G~i~sr~s~Di~~i~~~l~~~l~~~i~~i~~~i~~~ii~ 488 (1560)
.++..++..+.+.++..++|..++++++++|+.||++. ++|++++|+++|++.+++.+...+..++..++.+++.++++
T Consensus 94 ~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~-~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l 172 (598)
T 3qf4_B 94 FWLQGKIMLTLSQDVVFRLRKELFEKLQRVPVGFFDRT-PHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMM 172 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTHHHHHS-CHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999977999997688-88999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Q ss_conf 98978999999999999999999999999999899999999999999999945999998352299999999999848688
Q 000406 489 FLRSWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPF 568 (1560)
Q Consensus 489 ~~~s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIkaf~~e~~~~~~~~~~~~~~~~~ 568 (1560)
+.++|++++++++++|+++++..++.+..++..++..+..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+.
T Consensus 173 ~~~~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~ 252 (598)
T 3qf4_B 173 FRVNVILSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKV 252 (598)
T ss_dssp HHHCHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99989999999999999999999999999999999999999999999999737999997487099999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 76998998787899999999999999999999995066648999999999999799999999999999999999999999
Q 000406 569 GAKLGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFE 648 (1560)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~lv~~g~~t~g~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~a~~Ri~~ 648 (1560)
..+.....+....+..++..+..++++|+|++++..|.+++|.+++++.+...+..++..+...+..+..+..+++|+.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~ 332 (598)
T 3qf4_B 253 GTKAQIFSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFE 332 (598)
T ss_dssp HHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999998599789999999999999999999999999999999999999999
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCC
Q ss_conf 97019998999977776788866399997999969999865322202674299899985699998379999996298999
Q 000406 649 IIDRVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPT 728 (1560)
Q Consensus 649 ~l~~~~~~~~~~~~~~~~~~~~g~i~~~~vsf~y~~~~~~~vL~~isl~i~~G~~~aivG~sGsGKSTl~~ll~g~~~~~ 728 (1560)
+++.+++.+. ......++..+.|+++||+|+|+. +.++|+|+||++++|++++|+||||||||||+++|+|+++|+
T Consensus 333 ~l~~~~~~~~--~~~~~~~~~~~~i~~~~v~~~y~~--~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~ 408 (598)
T 3qf4_B 333 ILDLEEEKDD--PDAVELREVRGEIEFKNVWFSYDK--KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVD 408 (598)
T ss_dssp HTTSCCCCCC--SSCCCCCSCCCCEEEEEEECCSSS--SSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCS
T ss_pred HHCCCCCCCC--CCCCCCCCCCCEEEEEEEEEECCC--CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCC
T ss_conf 9768877777--777777777771899998997799--986012227998699889998999996999999994585799
Q ss_pred CCEEEECCEECCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 64899999526786588773548999047757666689998549987789999999999601878970999987412899
Q 000406 729 KGLITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDR 808 (1560)
Q Consensus 729 ~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~~~~~i~~lp~gl~t~ig~~ 808 (1560)
+|+|.+||.|+++++..++|++++||+|+|++|++||+|||.++.+..+++++.++++.++++++++.+|+|++|.+|++
T Consensus 409 ~G~i~~~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~ 488 (598)
T 3qf4_B 409 RGQILVDGIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDN 488 (598)
T ss_dssp EEEEEETTEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHH
T ss_pred CEEEEECCEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCC
T ss_conf 80899999983018899998410899079823246399997447999999999999999697888974645323642278
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEE
Q ss_conf 99999689999999998614998799827788999999999999999805996799984595500127989999198598
Q 000406 809 GTQLSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVV 888 (1560)
Q Consensus 809 g~~LSgGQkQrialARAll~~~~iliLDE~ts~lD~~t~~~i~~~l~~~~~~~Tvi~itH~l~~i~~~D~I~vl~~G~i~ 888 (1560)
|.+||||||||++||||++++|+|||||||||+||+++++.+++.++++.+++|+|+||||++.+..||+|++|++|+++
T Consensus 489 g~~LSgGq~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~ 568 (598)
T 3qf4_B 489 GEDLSQGQRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIV 568 (598)
T ss_dssp HTTSCHHHHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEE
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEE
T ss_conf 89879999999999999964999999989766799999999999999980899899994277899719989999899999
Q ss_pred EECCHHHHHHHCCHHHHHHHHHHH
Q ss_conf 852703575305327999999874
Q 000406 889 EIGNHRQLLERGGAYHDLVKLASE 912 (1560)
Q Consensus 889 e~G~~~~l~~~~~~~~~l~~~~~~ 912 (1560)
+.|+|+|++++++.|++++..+..
T Consensus 569 ~~g~~~~l~~~~~~~~~~~~~~~~ 592 (598)
T 3qf4_B 569 EMGKHDELIQKRGFYYELFTSQYG 592 (598)
T ss_dssp ECSCHHHHHHTTCHHHHHHHHHHG
T ss_pred EECCHHHHHHCCCHHHHHHHHHHH
T ss_conf 877899998678779999999764
No 7
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=735.30 Aligned_cols=574 Identities=29% Similarity=0.441 Sum_probs=491.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998985025679999999999999967779999999999987037999704554477999999999999999999999
Q 000406 332 LFSLFKYSTKLDMILVLLGCIGALINGGALPWYSYFFGNFVNKIANESSDPDKTQMMKDAEKICLLMTVLAAIVMMGAYL 411 (1560)
Q Consensus 332 ~~~l~~y~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 411 (1560)
+.++++|.++. ++.++++++++++..++.+..+++++.++|.+..................++..++++.++..++.++
T Consensus 2 ~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (578)
T 4a82_A 2 IKRYLQFVKPY-KYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFI 80 (578)
T ss_dssp HHHHHHHHGGG-HHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999998899-99999999999999999999999999999999816871146778888999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999999984590001037895699999999999999999999999999999999999999989
Q 000406 412 EITCWRLVGERSAQRIRTKYLRAVLRQDIAFFDTEVSTSDIMHGISSDIAQIQEVMGEKVAHFAHNIFTFICGYTVGFLR 491 (1560)
Q Consensus 412 ~~~~~~~~~~~~~~~lr~~l~~~il~~~l~ffd~~~~~G~i~sr~s~Di~~i~~~l~~~l~~~i~~i~~~i~~~ii~~~~ 491 (1560)
..++..+.+.+...++|.+++++++++|+.||+.. ++|++++|+++|++.+++.+...+..++..++.+++.+++++.+
T Consensus 81 ~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~-~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~ 159 (578)
T 4a82_A 81 RQYLAQWTSNKILYDIRKKLYNHLQALSARFYANN-QVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFL 159 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTS-CHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999987899997689-86999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78999999999999999999999999999899999999999999999945999998352299999999999848688769
Q 000406 492 SWKVSLVVLSVTPLMMFCGMAYKAVYVGLTSKEEASYRRAGSVAEQAISSIRTVFSFVAEDHFAVRYAGLLADSIPFGAK 571 (1560)
Q Consensus 492 s~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIkaf~~e~~~~~~~~~~~~~~~~~~~~ 571 (1560)
+|+++++.++++|+++++..++.+...+..++..+..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...+
T Consensus 160 ~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 239 (578)
T 4a82_A 160 DVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALK 239 (578)
T ss_dssp CTTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 69999999999999999999999999999999999999999999999824999998166499999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 98998787899999999999999999999995066648999999999999799999999999999999999999999970
Q 000406 572 LGFAKGAGMGVIYLVTYATWALAFWYGSILVARKELSGGAAIACFFGVNVGGRGLALSLSYFAQFAQGTVAATRVFEIID 651 (1560)
Q Consensus 572 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~~lv~~g~~t~g~~~~~~~~~~~~~~~l~~l~~~~~~l~~~~~a~~Ri~~~l~ 651 (1560)
.....+....+..++..+..++++|+|++++..|.+++|.+++++.++..+..++..+...+..+.++..+++|++++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~ 319 (578)
T 4a82_A 240 HTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLID 319 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999999999999999998599589999999999999999999999999999999999999999976
Q ss_pred CCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCE
Q ss_conf 19998999977776788866399997999969999865322202674299899985699998379999996298999648
Q 000406 652 RVPEIDPYNSEGRKLSSVSGKIEFKGVTFAYPSRPETVILRSLNLVIPSSKTLALVGTSGGGKSTVFALIERFYDPTKGL 731 (1560)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~g~i~~~~vsf~y~~~~~~~vL~~isl~i~~G~~~aivG~sGsGKSTl~~ll~g~~~~~~G~ 731 (1560)
.+++.++. ......++..+.|+++||+|+|+.. +.++|+|+||++++|++++|+||||||||||+++|+|+++|++|+
T Consensus 320 ~~~~~~~~-~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~ 397 (578)
T 4a82_A 320 EDYDIKNG-VGAQPIEIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQ 397 (578)
T ss_dssp CCCSSCCC-TTCCCCCCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEE
T ss_pred CCCCCCCC-CCCCCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCE
T ss_conf 89766678-7766667778807999999975899-974134337998799999998999985999999984678899967
Q ss_pred EEECCEECCCCCHHHHHCCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 99999526786588773548999047757666689998549987789999999999601878970999987412899999
Q 000406 732 ITLDGHDLKSLQVKWLRTQIGMVGQEPILFATSILENVLMGKENATMKEAVAACKAASAHSFISELPLGYDTQVGDRGTQ 811 (1560)
Q Consensus 732 I~i~g~~i~~~~~~~lr~~i~~v~Q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~~~~~i~~lp~gl~t~ig~~g~~ 811 (1560)
|.+||.|+++++..++|++++||+|+|++|++|++|||.++.+..+++++.++++.+++++++..+|+|++|.+|++|.+
T Consensus 398 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~ 477 (578)
T 4a82_A 398 ILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVK 477 (578)
T ss_dssp EEETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTT
T ss_pred EEECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCC
T ss_conf 99999984427899996006899289834764599998527999889999999988095999975733010253068896
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEEC
Q ss_conf 99689999999998614998799827788999999999999999805996799984595500127989999198598852
Q 000406 812 LSGGQKQRIALARAMIKDPRILLLDEPTSALDSESESIVQQAIDKISVGRTTIVIAHRLATVKNANTIVVLDQGSVVEIG 891 (1560)
Q Consensus 812 LSgGQkQrialARAll~~~~iliLDE~ts~lD~~t~~~i~~~l~~~~~~~Tvi~itH~l~~i~~~D~I~vl~~G~i~e~G 891 (1560)
||||||||++||||++++|+|||||||||+||+++++.+++.++++.+++|+|+||||++.+..||+|++|++|++++.|
T Consensus 478 LSgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g 557 (578)
T 4a82_A 478 LSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETG 557 (578)
T ss_dssp SCHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEEC
T ss_conf 79999999999999974999999978654579999999999999980899799983178999719989999899899988
Q ss_pred CHHHHHHHCCHHHHHHHH
Q ss_conf 703575305327999999
Q 000406 892 NHRQLLERGGAYHDLVKL 909 (1560)
Q Consensus 892 ~~~~l~~~~~~~~~l~~~ 909 (1560)
+|+|+++.++.|+++++.
T Consensus 558 ~~~el~~~~~~~~~~~~~ 575 (578)
T 4a82_A 558 THRELIAKQGAYEHLYSI 575 (578)
T ss_dssp CHHHHHHTTSHHHHHHTT
T ss_pred CHHHHHHCCCHHHHHHHH
T ss_conf 899998588389999985
No 8
>3qf4_B Uncharacterized ABC transporter ATP-binding prote TM_0288; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=731.39 Aligned_cols=569 Identities=27% Similarity=0.412 Sum_probs=503.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 38999996314579999999999999999999999999999998610210111117899999999999999999999899
Q 000406 978 QLSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGF 1057 (1560)
Q Consensus 978 ~~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~~~l~l~i~~~i~~~~~~~~ 1057 (1560)
.++.++++.++++..+++++++.++.+++..+.|++++.+++....... ......+.+.++++.++..++.+...++
T Consensus 24 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (598)
T 3qf4_B 24 TLRRLLGYLRPHTFTLIMVFVFVTVSSILGVLSPYLIGKTIDVVFVPRR---FDLLPRYMLILGTIYALTSLLFWLQGKI 100 (598)
T ss_dssp HHHHHGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTC---GGGHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999999999999999999999999999973688---8999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999999807998754556776799999861099999999789999999999999999999998799
Q 000406 1058 CGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWR 1137 (1560)
Q Consensus 1058 ~~~~~~~~~~~lr~~l~~~ll~~p~~~f~~~~~~~G~il~rls~Di~~i~~~i~~~i~~~i~~~~~~i~~l~~~~~~~~~ 1137 (1560)
..+.+.++..++|..+|++++++|+.||+ ++++|++++|+++|++.++..+...+..++.+++.+++.+++++.++|.
T Consensus 101 ~~~~~~~~~~~lr~~l~~~ll~~~~~~~~--~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~ 178 (598)
T 3qf4_B 101 MLTLSQDVVFRLRKELFEKLQRVPVGFFD--RTPHGDIISRVINDVDNINNVLGNSIIQFFSGIVTLAGAVIMMFRVNVI 178 (598)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTHHHH--HSCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999779999976--8888999999999999999999999999999999999999999999899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999710-4133432699999899988501067872241599999999997345899989999
Q 000406 1138 LTLVAAALTPFTLGASYLSLIINV-GPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQ 1216 (1560)
Q Consensus 1138 lali~l~~~pl~~~~~~~~~~~~~-~~~~~~~~~~~~~s~~~e~i~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~ 1216 (1560)
+++++++++|+.+++..+...... ..+.......+..+.+.|.+.|+++||+|++++.+.++|.+..++..+...+...
T Consensus 179 l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 258 (598)
T 3qf4_B 179 LSLVTLSIVPLTVLITQIVSSQTRKYFYENQRVLGQLNGIIEEDISGLTVIKLFTREEKEMEKFDRVNESLRKVGTKAQI 258 (598)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999999737999997487099999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99778999999999999999999999985086528899999999999999999987459899999988999999730288
Q 000406 1217 ILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKP 1296 (1560)
Q Consensus 1217 ~~~~~~~~~~~~~~l~~~~~l~~g~~lv~~g~~s~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~a~~s~~ri~~i~~~~~ 1296 (1560)
+..+...+...+..+..++++++|++++..|.+++|.+++++.+...+..++..+...+..+..+..+++|+.++.+.++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~g~ls~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~ 338 (598)
T 3qf4_B 259 FSGVLPPLMNMVNNLGFALISGFGGWLALKDIITVGTIATFIGYSRQFTRPLNELSNQFNMIQMALASAERIFEILDLEE 338 (598)
T ss_dssp HTTTHHHHHHHHHHHHHHHHHHHHHHHGGGTSSCHHHHHHHHTTTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99999999999999999999999999998599789999999999999999999999999999999999999999976887
Q ss_pred CCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEEC
Q ss_conf 54443466567899862899878999699999630010059995893999995999988899999962568983289999
Q 000406 1297 LIDNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIE 1376 (1560)
Q Consensus 1297 ~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~nIsl~I~~Ge~vaIVG~SGSGKSTLi~LL~gl~~p~~G~I~Id 1376 (1560)
+.+..... ..++..+.|+++||+|+|+. +.++|+|+||+|++||++|||||||||||||+++|+|+++|++|+|.+|
T Consensus 339 ~~~~~~~~-~~~~~~~~i~~~~v~~~y~~--~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i~~~ 415 (598)
T 3qf4_B 339 EKDDPDAV-ELREVRGEIEFKNVWFSYDK--KKPVLKDITFHIKPGQKVALVGPTGSGKTTIVNLLMRFYDVDRGQILVD 415 (598)
T ss_dssp CCCCSSCC-CCCSCCCCEEEEEEECCSSS--SSCSCCSEEEECCTTCEEEEECCTTSSTTHHHHHHTTSSCCSEEEEEET
T ss_pred CCCCCCCC-CCCCCCCEEEEEEEEEECCC--CCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEC
T ss_conf 77777777-77777771899998997799--9860122279986998899989999969999999945857998089999
Q ss_pred CEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH
Q ss_conf 98557889888752318882788899756899971499999999999999999289999809998302002899977957
Q 000406 1377 GVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGG 1456 (1560)
Q Consensus 1377 G~dI~~i~~~~lR~~Ia~VpQd~~LF~gTIreNI~~g~~~~sd~eI~~al~~a~l~d~I~~LP~GldT~Ige~G~~LSGG 1456 (1560)
|+|+++++.+++|++|+||||+|.+|++||+|||.++++..++++++++++.+++++++..+|+||+|.++++|.+||||
T Consensus 416 g~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~g~~LSgG 495 (598)
T 3qf4_B 416 GIDIRKIKRSSLRSSIGIVLQDTILFSTTVKENLKYGNPGATDEEIKEAAKLTHSDHFIKHLPEGYETVLTDNGEDLSQG 495 (598)
T ss_dssp TEEGGGSCHHHHHHHEEEECTTCCCCSSBHHHHHHSSSTTCCTTHHHHHTTTTTCHHHHHTSTTGGGCBCHHHHTTSCHH
T ss_pred CEEHHHCCHHHHHHCEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCCCCHHCCCCCCCCHH
T ss_conf 99830188999984108990798232463999974479999999999999996978889746453236422788987999
Q ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHH
Q ss_conf 99999999998159978998578858799999999999998348965999826957786238899996997978359888
Q 000406 1457 QKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHET 1536 (1560)
Q Consensus 1457 QkQRLaLARALL~~p~ILILDEaTSaLD~~tE~~I~~~L~~~~~~~TVIvIaHRlsti~~aDrIiVL~~G~Ive~Gt~~e 1536 (1560)
||||+|||||++++|+|||||||||+||+++++.|++.|++..+++|+|+||||+++++.||+|++|++|+|+|.|+|+|
T Consensus 496 q~Qrv~iAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~~~~ 575 (598)
T 3qf4_B 496 QRQLLAITRAFLANPKILILDEATSNVDTKTEKSIQAAMWKLMEGKTSIIIAHRLNTIKNADLIIVLRDGEIVEMGKHDE 575 (598)
T ss_dssp HHHHHHHHHHHHTCCSEEEECCCCTTCCHHHHHHHHHHHHHHHTTSEEEEESCCTTHHHHCSEEEEECSSSEEECSCHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECCHHH
T ss_conf 99999999999649999999897667999999999999999808998999942778997199899998999998778999
Q ss_pred HHHHCCCHHHHHHHHHHHHH
Q ss_conf 99521582999999996421
Q 000406 1537 LLASHLNGVYASLVRAETEA 1556 (1560)
Q Consensus 1537 Ll~~~~~g~y~~l~~~q~~~ 1556 (1560)
|++ ++|.|++++..|...
T Consensus 576 l~~--~~~~~~~~~~~~~~~ 593 (598)
T 3qf4_B 576 LIQ--KRGFYYELFTSQYGL 593 (598)
T ss_dssp HHH--TTCHHHHHHHHHHGG
T ss_pred HHH--CCCHHHHHHHHHHHH
T ss_conf 986--787799999997646
No 9
>3qf4_A ABC transporter, ATP-binding protein; multidrug transporter, transport protein; HET: ANP; 2.90A {Thermotoga maritima}
Probab=1.00 E-value=1 Score=726.68 Aligned_cols=570 Identities=25% Similarity=0.352 Sum_probs=498.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999963145799999999999999999999999999999986102101111178999999999999999999998999
Q 000406 979 LSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDVRYLSLALVGLGFGCIIFMTGQQGFC 1058 (1560)
Q Consensus 979 ~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~~~~~~~~l~l~i~~~i~~~~~~~~~ 1058 (1560)
++.++++.++++..+++.+++.++.+++....|+++..+++...... .......+.+.++++.++..++.+...++.
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (587)
T 3qf4_A 11 SKTLARYLKPYWIFAVLAPLFMVVEVICDLSQPTLLARIVDEGIARG---DFSLVLKTGILMLIVALIGAVGGIGCTVFA 87 (587)
T ss_dssp CCCGGGGTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999987369---879999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999999998079987545567767999998610999999997899999999999999999999987999
Q 000406 1059 GWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVLNWRL 1138 (1560)
Q Consensus 1059 ~~~~~~~~~~lr~~l~~~ll~~p~~~f~~~~~~~G~il~rls~Di~~i~~~i~~~i~~~i~~~~~~i~~l~~~~~~~~~l 1138 (1560)
.+.+.++..++|..+|++++++|+.||+ ++++|++++|+++|++.+++++...+..++..++..++.+++++.++|.+
T Consensus 88 ~~~~~~~~~~lr~~l~~~ll~~~~~~~~--~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~~l 165 (587)
T 3qf4_A 88 SYASQNFGADLRRDLFRKVLSFSISNVN--RFHTSSLITRLTNDVTQLQNLVMMLLRIVVRAPLLFVGGIVMAVSINVKL 165 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCHHHHH--HSCHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999788979976--58889999999999999999999999999999999999999999998999
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999997-1041334326999998999885010678722415999999999973458999899999
Q 000406 1139 TLVAAALTPFTLGASYLSLII-NVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVKRSQI 1217 (1560)
Q Consensus 1139 ali~l~~~pl~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~e~i~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~~~~~ 1217 (1560)
++++++++|++++..++.... ....+.......+..+.+.|.+.|+++||+|++++.+.++|.+..++..+...+...+
T Consensus 166 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 245 (587)
T 3qf4_A 166 SSVLIFLIPPIVLLFVWLTKKGNPLFRKIQESTDEVNRVVRENLLGVRVVRAFRREEYENENFRKANESLRRSIISAFSL 245 (587)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999999999999999999999998559999986214999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 97789999999999999999999999850865288999999999999999999874598999999889999997302885
Q 000406 1218 LGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITKRKPL 1297 (1560)
Q Consensus 1218 ~~~~~~~~~~~~~l~~~~~l~~g~~lv~~g~~s~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~a~~s~~ri~~i~~~~~~ 1297 (1560)
.....++...+..+..++++|+|++++..|.+++|.+++++.+......++..+...+..+..+..+.+|+.++.+.+++
T Consensus 246 ~~~~~~~~~~~~~~~~~~vl~~g~~~v~~g~lt~g~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~~~~~ 325 (587)
T 3qf4_A 246 IVFALPLFIFIVNMGMIAVLWFGGVLVRNNQMEIGSIMAYTNYLMQIMFSLMMIGNILNFIVRASASAKRVLEVLNEKPA 325 (587)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 99999999999999999999999999984993899999999999999999999999999999999999999999768976
Q ss_pred CCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC
Q ss_conf 44434665678998628998789996999996300100599958939999959999888999999625689832899999
Q 000406 1298 IDNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKVMIEG 1377 (1560)
Q Consensus 1298 ~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~nIsl~I~~Ge~vaIVG~SGSGKSTLi~LL~gl~~p~~G~I~IdG 1377 (1560)
.++........+..+.|+++||+|+|+.. .+++|+|+||+|++||++|||||||||||||+++|+|+++|++|+|.+||
T Consensus 326 ~~~~~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~Ge~~~ivG~sGsGKSTll~~l~g~~~~~~G~i~i~g 404 (587)
T 3qf4_A 326 IEEADNALALPNVEGSVSFENVEFRYFEN-TDPVLSGVNFSVKPGSLVAVLGETGSGKSTLMNLIPRLIDPERGRVEVDE 404 (587)
T ss_dssp CCCCTTCBCCSCCCCCEEEEEEEECSSSS-SCCSEEEEEEEECTTCEEEEECSSSSSHHHHHHTTTTSSCCSEEEEEESS
T ss_pred CCCCCCCCCCCCCCCCEEEEEEEEECCCC-CCCCEECEEEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEEEECC
T ss_conf 57887765668888807997889984899-97642111799869988999899999799999999278669986798999
Q ss_pred EECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf 85578898887523188827888997568999714999999999999999992899998099983020028999779579
Q 000406 1378 VDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQLSGGQ 1457 (1560)
Q Consensus 1378 ~dI~~i~~~~lR~~Ia~VpQd~~LF~gTIreNI~~g~~~~sd~eI~~al~~a~l~d~I~~LP~GldT~Ige~G~~LSGGQ 1457 (1560)
+|+++++.+++|++|+||||+|.+|++||+|||.++.+..++++++++++.+++++++..+|+||+|.+++.|.+|||||
T Consensus 405 ~~i~~~~~~~~r~~i~~v~Q~~~lf~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~~~~~~~~~~LSgGq 484 (587)
T 3qf4_A 405 LDVRTVKLKDLRGHISAVPQETVLFSGTIKENLKWGREDATDDEIVEAAKIAQIHDFIISLPEGYDSRVERGGRNFSGGQ 484 (587)
T ss_dssp SBGGGBCHHHHHHHEEEECSSCCCCSEEHHHHHTTTCSSCCHHHHHHHHHHTTCHHHHHTSSSGGGCEECSSSCSSCHHH
T ss_pred EECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCCHHHHHCCCCCCCCHHH
T ss_conf 98340789999841389778986767559999852488999999999999968499997565312127518989929999
Q ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
Q ss_conf 99999999981599789985788587999999999999983489659998269577862388999969979783598889
Q 000406 1458 KQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGSHETL 1537 (1560)
Q Consensus 1458 kQRLaLARALL~~p~ILILDEaTSaLD~~tE~~I~~~L~~~~~~~TVIvIaHRlsti~~aDrIiVL~~G~Ive~Gt~~eL 1537 (1560)
|||++||||++++|+|||||||||+||+++|+.|++.|++..+++|+|+||||++++..||+|++|++|+|+|.|+|+||
T Consensus 485 rQrv~lARal~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~tvi~itH~l~~~~~~d~i~vl~~G~i~~~g~~~el 564 (587)
T 3qf4_A 485 KQRLSIARALVKKPKVLILDDCTSSVDPITEKRILDGLKRYTKGCTTFIITQKIPTALLADKILVLHEGKVAGFGTHKEL 564 (587)
T ss_dssp HHHHHHHHHHHTCCSEEEEESCCTTSCHHHHHHHHHHHHHHSTTCEEEEEESCHHHHTTSSEEEEEETTEEEEEECHHHH
T ss_pred HHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECCHHHH
T ss_conf 99999999997299999997975447999999999999986799989998227688981998999989989997889999
Q ss_pred HHHCCCHHHHHHHHHHHHH
Q ss_conf 9521582999999996421
Q 000406 1538 LASHLNGVYASLVRAETEA 1556 (1560)
Q Consensus 1538 l~~~~~g~y~~l~~~q~~~ 1556 (1560)
++ +++.|+++|..|.+.
T Consensus 565 ~~--~~~~~~~~~~~~~~~ 581 (587)
T 3qf4_A 565 LE--HCKPYREIYESQFGN 581 (587)
T ss_dssp HH--HCHHHHHHHHHHC--
T ss_pred HH--CCCHHHHHHHHHHCC
T ss_conf 86--783999999998465
No 10
>4a82_A Cystic fibrosis transmembrane conductance regulat; CFTR, ION channel, transport protein, casse protein; 2.00A {Homo sapiens} PDB: 2onj_A* 2hyd_A
Probab=1.00 E-value=1 Score=723.72 Aligned_cols=571 Identities=30% Similarity=0.443 Sum_probs=499.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH----HHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8999996314579999999999999999999999999999998610210111117----899999999999999999999
Q 000406 979 LSEIWKLQRPEFAMIIFGFILGMHAGAILSIFPLILGQALQVYFDDTASTLRRDV----RYLSLALVGLGFGCIIFMTGQ 1054 (1560)
Q Consensus 979 ~~~l~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~ll~~~i~~~~~~~~~~~~~~~----~~~~~~~l~l~i~~~i~~~~~ 1054 (1560)
+++++++.+++++.+++.+++.++..++..+.|+++..+++.............. ..+.+.++++.++..++.+..
T Consensus 2 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (578)
T 4a82_A 2 IKRYLQFVKPYKYRIFATIIVGIIKFGIPMLIPLLIKYAIDGVINNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIR 81 (578)
T ss_dssp HHHHHHHHGGGHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 79999998899999999999999999999999999999999998168711467788889999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999999999999999999807998754556776799999861099999999789999999999999999999998
Q 000406 1055 QGFCGWAGTKLTMRVRELLFRSILKQEPGWFDFEENSTGVLVSRLSIDSISFRSVLGDRFSVLLMGLSSAAVGLGVSLVL 1134 (1560)
Q Consensus 1055 ~~~~~~~~~~~~~~lr~~l~~~ll~~p~~~f~~~~~~~G~il~rls~Di~~i~~~i~~~i~~~i~~~~~~i~~l~~~~~~ 1134 (1560)
.++..+++.++..++|..++++++++|+.||+ ++++|++++|+++|++.++.++...+..++.+++..++.+++++.+
T Consensus 82 ~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~--~~~~G~l~~r~~~D~~~i~~~~~~~~~~~~~~~~~~i~~~~~l~~~ 159 (578)
T 4a82_A 82 QYLAQWTSNKILYDIRKKLYNHLQALSARFYA--NNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFL 159 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHH--TSCHHHHHHHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999999999999999999878999976--8986999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 7999999999999999999999997-104133432699999899988501067872241599999999997345899989
Q 000406 1135 NWRLTLVAAALTPFTLGASYLSLII-NVGPKIDNSSYAKASSIASGAVSNIRTVTTFSAQEQIINSFDKALSEPKKKSVK 1213 (1560)
Q Consensus 1135 ~~~lali~l~~~pl~~~~~~~~~~~-~~~~~~~~~~~~~~~s~~~e~i~gi~tIraf~~e~~~~~~~~~~~~~~~~~~~~ 1213 (1560)
+|.+++++++++|++++...+.... ....+.......+..+.+.|.+.|+++||+|++++.+.++|.+..++..+...+
T Consensus 160 ~~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~ 239 (578)
T 4a82_A 160 DVKLTLAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEAKNFDKKNTNFLTRALK 239 (578)
T ss_dssp CTTTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 69999999999999999999999999999999999999999999999824999998166499999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999778999999999999999999999985086528899999999999999999987459899999988999999730
Q 000406 1214 RSQILGLTLGFSQGAMYVAYTFTLWFGAYLVKQGHASFGVVYKIFLILVLSSFSVGQLAGLAPDTSMAATAIPAVLQITK 1293 (1560)
Q Consensus 1214 ~~~~~~~~~~~~~~~~~l~~~~~l~~g~~lv~~g~~s~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~a~~s~~ri~~i~~ 1293 (1560)
..++.....++...+..+..++++++|++++..|.+++|.+++++.+...+..|+..+...+..+..+..+++|+.++.+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~lt~g~l~~~~~~~~~~~~~l~~l~~~~~~~~~~~~s~~ri~~~l~ 319 (578)
T 4a82_A 240 HTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGSITVGTLAAFVGYLELLFGPLRRLVASFTTLTQSFASMDRVFQLID 319 (578)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHTHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999999999999999998599589999999999999999999999999999999999999999976
Q ss_pred CCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCCCCCEE
Q ss_conf 28854443466567899862899878999699999630010059995893999995999988899999962568983289
Q 000406 1294 RKPLIDNVKGRKLERSKPLGIELKMVTFTYPSRPEVTVLKDFCLKVKGGSMVALVGGSGSGKSTVIWLIQRFYDPNQGKV 1373 (1560)
Q Consensus 1294 ~~~~~~~~~~~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~nIsl~I~~Ge~vaIVG~SGSGKSTLi~LL~gl~~p~~G~I 1373 (1560)
.+++..+...........+.|+++||+|+|++. +.++|+|+||+|++||++|||||||||||||+++|+|+++|++|+|
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~i~~~~v~~~y~~~-~~~~l~~isl~i~~G~~~~ivG~sGsGKSTll~~l~g~~~p~~G~i 398 (578)
T 4a82_A 320 EDYDIKNGVGAQPIEIKQGRIDIDHVSFQYNDN-EAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFYDVTSGQI 398 (578)
T ss_dssp CCCSSCCCTTCCCCCCCSCCEEEEEEEECSCSS-SCCSEEEEEEEECTTCEEEEECSTTSSHHHHHTTTTTSSCCSEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCC-CCCCEEEEEEEECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEE
T ss_conf 897666787766667778807999999975899-9741343379987999999989999859999999846788999679
Q ss_pred EECCEECCCCCHHHHHHCEEEECCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 99998557889888752318882788899756899971499999999999999999289999809998302002899977
Q 000406 1374 MIEGVDLREINVKWLRKQTALVGQEPALFAGTIRDNIALGNPKASWAEIEEAAEEAYIHKFISSLPQGYETQVGESGVQL 1453 (1560)
Q Consensus 1374 ~IdG~dI~~i~~~~lR~~Ia~VpQd~~LF~gTIreNI~~g~~~~sd~eI~~al~~a~l~d~I~~LP~GldT~Ige~G~~L 1453 (1560)
.+||+|+++++.+++|++|+||||+|.+|++||+|||.++.+..++++++++++.+++++++..+|+|++|.++++|.+|
T Consensus 399 ~~~g~~~~~~~~~~~r~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~g~~t~~~~~g~~L 478 (578)
T 4a82_A 399 LIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTEVGERGVKL 478 (578)
T ss_dssp EETTEEGGGSCHHHHHHTEEEECSSCCCCSSBHHHHHGGGCSSCCHHHHHHHHHHTTCHHHHHTSTTGGGCBCCGGGTTS
T ss_pred EECCEEHHHCCHHHHHHHEEEEECCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHCCCHHHHHHCCCCCCC
T ss_conf 99999844278999960068992898347645999985279998899999999880959999757330102530688967
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHCCEEEEEECCEEEEECC
Q ss_conf 95799999999998159978998578858799999999999998348965999826957786238899996997978359
Q 000406 1454 SGGQKQRIAIARAILKGSRVLLLDEASSALDLESEKHVQDALRKVSKRATTIVVAHRLSTIREANMIAVVRDGAVVEYGS 1533 (1560)
Q Consensus 1454 SGGQkQRLaLARALL~~p~ILILDEaTSaLD~~tE~~I~~~L~~~~~~~TVIvIaHRlsti~~aDrIiVL~~G~Ive~Gt 1533 (1560)
|||||||++||||++++|+|||||||||+||+++++.+++.+++..+++|+|+||||+++++.||+|++|++|+|+|.|+
T Consensus 479 SgGq~Qrv~lAral~~~p~illlDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~l~~~~~~d~i~~l~~G~i~~~g~ 558 (578)
T 4a82_A 479 SGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQEALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGT 558 (578)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEESTTTTCCHHHHHHHHHHHHHHTTTSEEEEECSSGGGTTTCSEEEEEETTEEEEEEC
T ss_pred CHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHCCCEEEEEECCEEEEECC
T ss_conf 99999999999999749999999786545799999999999999808997999831789997199899998998999888
Q ss_pred HHHHHHHCCCHHHHHHHHHHH
Q ss_conf 888995215829999999964
Q 000406 1534 HETLLASHLNGVYASLVRAET 1554 (1560)
Q Consensus 1534 ~~eLl~~~~~g~y~~l~~~q~ 1554 (1560)
|+||++ ++|.|+++|..|.
T Consensus 559 ~~el~~--~~~~~~~~~~~q~ 577 (578)
T 4a82_A 559 HRELIA--KQGAYEHLYSIQN 577 (578)
T ss_dssp HHHHHH--TTSHHHHHHTTTT
T ss_pred HHHHHH--CCCHHHHHHHHHC
T ss_conf 999985--8838999998506
Done!