BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000407
(1558 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P34881|DNMT1_ARATH DNA (cytosine-5)-methyltransferase 1 OS=Arabidopsis thaliana GN=DMT1
PE=1 SV=1
Length = 1534
Score = 1867 bits (4836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 949/1509 (62%), Positives = 1151/1509 (76%), Gaps = 35/1509 (2%)
Query: 68 CTDFKEKSVRISEKSYLVEAKKDQYADDEIVAVGLTARQDG--DRPNRRLNDFILHDENG 125
CT FKEKS+R+ EKS +E KK Q ++E +A+ LTA + DRP RRLNDF+L D +G
Sbjct: 37 CTSFKEKSIRVCEKSATIEVKKQQIVEEEFLALRLTALETDVEDRPTRRLNDFVLFDSDG 96
Query: 126 LPQPLEMLEIDDLFISGLILPLQESSDREKEKGVRCEGFGRIESWSISGYEDGSPVIWLS 185
+PQPLEMLEI D+F+SG ILP +D+EKEKGVRC FGR+E WSISGYEDGSPVIW+S
Sbjct: 97 VPQPLEMLEIHDIFVSGAILPSDVCTDKEKEKGVRCTSFGRVEHWSISGYEDGSPVIWIS 156
Query: 186 TDIADYDCLKPASSYKKYYELFFEKARACIEVYKKLSKTSGGNSDCSIDELLAGVVRSMS 245
T++ADYDC KPA+SY+K Y+ F+EKARA + VYKKLSK+SGG+ D ++ELLA VVRSMS
Sbjct: 157 TELADYDCRKPAASYRKVYDYFYEKARASVAVYKKLSKSSGGDPDIGLEELLAAVVRSMS 216
Query: 246 -GSKCFRGGVSIKDFVISQGEFIFNQLIGLDETSKKNDQKFAELPVLVALKEESSKRENF 304
GSK F G +I DFVISQG+FI+NQL GLDET+KK++ + E+PVLVAL+E+SSK +
Sbjct: 217 SGSKYFSSGAAIIDFVISQGDFIYNQLAGLDETAKKHESSYVEIPVLVALREKSSKIDKP 276
Query: 305 VQV-NAASLGGNLAIGSKVGDGDG-KMDQYGSSTCPADEDEDAKLARLLQEEELWQSKKQ 362
+Q S G + S+V + + DQ T D+D + A LLQ+EE +S +Q
Sbjct: 277 LQRERNPSNGVRIKEVSQVAESEALTSDQLVDGT-----DDDRRYAILLQDEENRKSMQQ 331
Query: 363 -KKTQGSTSGMNKFYIKINEDEIANDYPFPVFYRPSEEEFDELLAYDSDYDSCDIDQLPR 421
+K S S N FYIKINEDEIANDYP P +Y+ SEEE DEL+ YD+ Y+ + LP
Sbjct: 332 PRKNSSSGSASNMFYIKINEDEIANDYPLPSYYKTSEEETDELILYDASYE-VQSEHLPH 390
Query: 422 RMLHDWSLYNSDSRLISLELLPMKPCEDIDVTIFGSGKMISDEGSGFCL-DTDSSQCTSG 480
RMLH+W+LYNSD R ISLELLPMK C+DIDV IFGSG + D GS L D DS
Sbjct: 391 RMLHNWALYNSDLRFISLELLPMKQCDDIDVNIFGSGVVTDDNGSWISLNDPDSG----- 445
Query: 481 VSGAQDAGGFPIYLSSIKEWMIEFGSS-MIFISIRTDLAWYRLGKPSKQYAPWYEPVLKT 539
S + D G I+LS IKEWMIEFGS +I ISIRTD+AWYRLGKPSK YAPW++PVLKT
Sbjct: 446 -SQSHDPDGMCIFLSQIKEWMIEFGSDDIISISIRTDVAWYRLGKPSKLYAPWWKPVLKT 504
Query: 540 ARVAISIITMLKEQTRVSRLSFTDVIKRLSEIKKDQHSYISSDPAAVERYVVVHGQIVLQ 599
ARV ISI+T L+ ++RV+RLSF DV KRLS ++ + +YISSDP AVERY+VVHGQI+LQ
Sbjct: 505 ARVGISILTFLRVESRVARLSFADVTKRLSGLQANDKAYISSDPLAVERYLVVHGQIILQ 564
Query: 600 LFAEYPDEQIKKCAFIIGLMKKMEERHHTKWLVKKKKVQKSEINLNPRASMGPVVVSKRK 659
LFA YPD+ +K+C F++GL K+E+RHHTKW++KKKK+ E+NLNPRA M PV SKRK
Sbjct: 565 LFAVYPDDNVKRCPFVVGLASKLEDRHHTKWIIKKKKISLKELNLNPRAGMAPVA-SKRK 623
Query: 660 VMQATTTRLINRIWGEYYSNYSPEDGKEETACEANEDEEVEEQGENEEDDTEEEKLISEE 719
MQATTTRL+NRIWGE+YSNYSPED + TA E EDE EE G EE+ EE + E
Sbjct: 624 AMQATTTRLVNRIWGEFYSNYSPEDPLQATAAENGEDEVEEEGGNGEEEVEEEGENGLTE 683
Query: 720 RQISCSVAVQ-------IKSRSTKKEITWEGECVRKS--GLALYKKAIVHGEVVSLGSAV 770
+ V VQ I+ S K+EI W+GE + K+ G LY++A+V GE+V++G AV
Sbjct: 684 DTVPEPVEVQKPHTPKKIRGSSGKREIKWDGESLGKTSAGEPLYQQALVGGEMVAVGGAV 743
Query: 771 LVEVDELDQLPVIYFVEYMFEATGGCKLFHGIIMQRGSHTVLGNTANEREVFLANQCRDL 830
+EVD+ D++P IYFVEYMFE+T CK+ HG +QRGS TVLGN ANERE+FL N+C
Sbjct: 744 TLEVDDPDEMPAIYFVEYMFESTDHCKMLHGRFLQRGSMTVLGNAANERELFLTNECMTT 803
Query: 831 ELQDIKQTVVVDIRSVPWGHQHRKDIANADKVDRARAEERKKKGLPTEYYCKSLYWPERG 890
+L+DIK +IRS PWGHQ+RK ADK+D ARA ERK K LPTEYYCKSLY PERG
Sbjct: 804 QLKDIKGVASFEIRSRPWGHQYRKKNITADKLDWARALERKVKDLPTEYYCKSLYSPERG 863
Query: 891 AFFILPVDSMGLGVGSCHACGTKESEKEKETFKVH-SKTSFVYGTAEYFVHDYVYISPHH 949
FF LP+ +G G C +C +E E+++ T K++ SKT F EY V D+VY++P
Sbjct: 864 GFFSLPLSDIGRSSGFCTSCKIREDEEKRSTIKLNVSKTGFFINGIEYSVEDFVYVNPDS 923
Query: 950 FTWDKAEGET-FKAGRNVGLKPYVVCQLLEIIVPKEPKRAEVKSTQVKVRRFFRPDDISA 1008
K +T FK+GRN+GL+ YVVCQLLEI VPKE ++A++ S VKVRRF+RP+D+SA
Sbjct: 924 IGGLKEGSKTSFKSGRNIGLRAYVVCQLLEI-VPKESRKADLGSFDVKVRRFYRPEDVSA 982
Query: 1009 EKAYCSDIREVYYSEETHLIFVEAIAGKCEVRKKNDIPACNAPAIFQHIFFCEHLHDPSK 1068
EKAY SDI+E+Y+S++T ++ A+ GKCEVRKK+D+P I HIFFC+ D SK
Sbjct: 983 EKAYASDIQELYFSQDTVVLPPGALEGKCEVRKKSDMPLSREYPISDHIFFCDLFFDTSK 1042
Query: 1069 GSLKQLPAHIKLRYSSGSLDSEAASRRKKGKCIEGEDELEVEKQGGASQENHLATLDIFA 1128
GSLKQLPA++K ++S+ + + R+KKGK +E E E E+ K +E LATLDIFA
Sbjct: 1043 GSLKQLPANMKPKFST--IKDDTLLRKKKGKGVESEIESEIVKPVEPPKEIRLATLDIFA 1100
Query: 1129 GCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAVMEKCGDAE 1188
GCGGLS GL+++G+S KWAIEYEEPAG+AFK NHPES + ++NCNVILRA+MEK GD +
Sbjct: 1101 GCGGLSHGLKKAGVSDAKWAIEYEEPAGQAFKQNHPESTVFVDNCNVILRAIMEKGGDQD 1160
Query: 1189 DCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMI 1248
DCVST+EA ELAA L E + LPLPGQVDFINGGPPCQGFSGMNRFNQS+WSKVQCEMI
Sbjct: 1161 DCVSTTEANELAAKLTEEQKSTLPLPGQVDFINGGPPCQGFSGMNRFNQSSWSKVQCEMI 1220
Query: 1249 LAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQ 1308
LAFLSFADYF+PRYFLLENVR FVSFNKGQTF+LTLASLLEMGYQVRFGILEAGA+GVSQ
Sbjct: 1221 LAFLSFADYFRPRYFLLENVRTFVSFNKGQTFQLTLASLLEMGYQVRFGILEAGAYGVSQ 1280
Query: 1309 SRKRAFIWAASPHDTLPEWPEPMHVFAAPELKIMLSDNYQYSAVRSTANGAPFRAMTVRD 1368
SRKRAFIWAA+P + LPEWPEPMHVF P+LKI LS Y+AVRSTA GAPFR +TVRD
Sbjct: 1281 SRKRAFIWAAAPEEVLPEWPEPMHVFGVPKLKISLSQGLHYAAVRSTALGAPFRPITVRD 1340
Query: 1369 TIGDLPAVGNGASKTIMEYQNDPVSWFQKRIRGNMAVLTDHISKEMNELNLIRCQKIPKR 1428
TIGDLP+V NG S+T EY+ VSWFQK IRGN LTDHI K MNELNLIRC+ IP R
Sbjct: 1341 TIGDLPSVENGDSRTNKEYKEVAVSWFQKEIRGNTIALTDHICKAMNELNLIRCKLIPTR 1400
Query: 1429 PGADWHDLPDEKVKLSTGQVVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQP 1488
PGADWHDLP KV LS G+V ++IP+CLPNTA+RHN WKGL+GRLDW+GNFPTS+TDPQP
Sbjct: 1401 PGADWHDLPKRKVTLSDGRVEEMIPFCLPNTAERHNGWKGLYGRLDWQGNFPTSVTDPQP 1460
Query: 1489 MGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHGSIQHKHRQIGNAVPPTLAFALGRKL 1548
MGKVGMCFHP+Q RILTVRECARSQGFPDSY+F G+I HKHRQIGNAVPP LAFALGRKL
Sbjct: 1461 MGKVGMCFHPEQHRILTVRECARSQGFPDSYEFAGNINHKHRQIGNAVPPPLAFALGRKL 1520
Query: 1549 KEAVESKRS 1557
KEA+ K+S
Sbjct: 1521 KEALHLKKS 1529
>sp|B1Q3J6|DNM1B_ORYSJ DNA (cytosine-5)-methyltransferase 1B OS=Oryza sativa subsp. japonica
GN=MET1B PE=2 SV=1
Length = 1529
Score = 1836 bits (4756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 907/1508 (60%), Positives = 1160/1508 (76%), Gaps = 35/1508 (2%)
Query: 54 DSEEPRKRPKRMAACTDFKEKSVRISEKSYLVEAKKDQYADDEIVAVGLTAR-QDGDRPN 112
DS KRP+R AAC+DFKEKSVR+S+KS +V ++ ++E+ AV LT + RP
Sbjct: 51 DSRAACKRPRRAAACSDFKEKSVRLSDKSSVVATNGNKMEEEEMDAVKLTKLGPEVQRPC 110
Query: 113 RRLNDFILHDENGLPQPLEMLEIDDLFISGLILPLQESSDREKEKGVRCEGFGRIESWSI 172
R+L DFILHD +G QP EM EIDD FI+ LI+P+ + +++++KGVRCEGFGRIE W+I
Sbjct: 111 RKLIDFILHDADGKLQPFEMSEIDDFFITALIMPMDDDLEKDRQKGVRCEGFGRIEDWAI 170
Query: 173 SGYEDGSPVIWLSTDIADYDCLKPASSYKKYYELFFEKARACIEVYKKLSKTSGGNSDCS 232
SGY++G+ V+W+ST++ADY+C+KPA +YK YY+ F+EKA+ C+EVY+KL+++ GGN +
Sbjct: 171 SGYDEGTAVVWVSTEVADYECVKPAGNYKSYYDHFYEKAQVCVEVYRKLARSVGGNPNLG 230
Query: 233 IDELLAGVVRSMSGSKCFRGGVSIKDFVISQGEFIFNQLIGLDETSKKNDQKFAELPVLV 292
++ELLA VVRS++ K + G +S KDFVIS GEF++NQLIGLDET+ +D+KFA LPVL+
Sbjct: 231 LEELLASVVRSINAIKGYSGTLS-KDFVISNGEFVYNQLIGLDETANTDDEKFATLPVLL 289
Query: 293 ALKEESSKRENFVQVNAASLGGNLAIGS-KVGDGDGKMDQYGSSTCPADEDEDAKLARLL 351
AL++ R V + L N++ GS K+ D + K ED+D KLARLL
Sbjct: 290 ALRDGCKSR-----VEVSKLQPNISNGSLKINDAECK---------EVSEDDDEKLARLL 335
Query: 352 QEEELWQSKKQKKTQGSTSGMNKFYIKINEDEIANDYPFPVFYRPSEEEFDELLAYDSDY 411
Q+EE W+ KQ+ +G+TS N YIKI+E EIANDYP P +Y+PS +E DE + +DS+
Sbjct: 336 QQEEEWKMMKQRGKRGTTSQKN-VYIKISEAEIANDYPLPAYYKPSSQEMDEYI-FDSE- 392
Query: 412 DSCDIDQLPRRMLHDWSLYNSDSRLISLELLPMKPCEDIDVTIFGSGKMISDEGSGFCLD 471
DS D +P R+L++W+LYN+DSRLI LEL+PMK + D+ +FGSG M D+GS C
Sbjct: 393 DSFYSD-VPVRILNNWALYNADSRLIPLELIPMKAGAENDIVVFGSGFMREDDGS-CCST 450
Query: 472 TDSSQCTSGVSGAQDAGGFPIYLSSIKEWMIEFGSSMIFISIRTDLAWYRLGKPSKQYAP 531
+S++ +S S G IYLS IKEW+IEFG SMI I+IRTD+AWY+L +P+KQYAP
Sbjct: 451 AESAKLSSSSSSNHQDAGVSIYLSPIKEWVIEFGGSMICITIRTDVAWYKLRQPTKQYAP 510
Query: 532 WYEPVLKTARVAISIITMLKEQTRVSRLSFTDVIKRLSEIKKDQHSYISSDPAAVERYVV 591
W EPVLKTAR+++SIIT+LKEQ+R S+LSF DVIK+++E K +++SS+ A VERY+V
Sbjct: 511 WCEPVLKTARLSVSIITLLKEQSRASKLSFADVIKKVAEFDKGSPAFVSSNVALVERYIV 570
Query: 592 VHGQIVLQLFAEYPDEQIKKCAFIIGLMKKMEERHHTKWLVKKK-KVQKSEINLNPRASM 650
VHGQI+LQ F+++PDE I++ AF GL+ KME+R HTK ++KKK +V + E NLNP A+M
Sbjct: 571 VHGQIILQQFSDFPDETIRRSAFATGLLMKMEQRRHTKLVMKKKVQVMRGE-NLNPSATM 629
Query: 651 GPVVVSKRKVMQATTTRLINRIWGEYYSNYSPEDGKEETACEANEDEEVEEQGENEEDDT 710
GP S+RKVM+ATTTRLINRIW +YY+++ PED K+ EA E ++ E+ E+E+ +
Sbjct: 630 GPA--SRRKVMRATTTRLINRIWSDYYTHHFPEDSKDADVNEAKEIDDELEENEDEDAEE 687
Query: 711 EEEKLISEERQISCSVAVQIKSRSTKKEITWEGECVRK--SGLALYKKAIVHGEVVSLGS 768
E + + S + T KEI WEGE + K SG ALYK A V ++LG
Sbjct: 688 EAQIEEENVSKTPPSTRSRKLVSQTCKEIRWEGEAIGKTPSGEALYKCAYVRELRINLGR 747
Query: 769 AVLVEVDELDQLPVIYFVEYMFEATGGCKLFHGIIMQRGSHTVLGNTANEREVFLANQCR 828
V +E D+ +L V+ FVEYMF+ G K+ HG ++Q+GS TVLGN ANER++FL N+C
Sbjct: 748 TVALE-DDSGEL-VMCFVEYMFQKLNGAKMVHGRLLQKGSETVLGNAANERDLFLTNECL 805
Query: 829 DLELQDIKQTVVVDIRSVPWGHQHRKDIANADKVDRARAEERKKKGLPTEYYCKSLYWPE 888
+ EL+DIK+ + V+++S+PWGH++RK+ A AD+++RA+AE+RKKKGLP EY CKSLYWPE
Sbjct: 806 EFELEDIKELMSVNLQSLPWGHKYRKENAEADRIERAKAEDRKKKGLPMEYLCKSLYWPE 865
Query: 889 RGAFFILPVDSMGLGVGSCHACGTKESEKEKETFKVHSKTSFVYGTAEYFVHDYVYISPH 948
+GAFF LP D +GLG G C +C KE + ++ ++ SK SF+Y Y V+DY+YI P
Sbjct: 866 KGAFFSLPHDKLGLGNGFCSSCQQKEPDCDE--LQILSKNSFIYRNITYNVNDYLYIRPD 923
Query: 949 HFTWDKAEGETFKAGRNVGLKPYVVCQLLEIIVPKEPKRAEVKSTQVKVRRFFRPDDISA 1008
F+ ++ TFK GRNVGLKPYVVC LL++ P ++ ST++ VRRF+RPDDIS+
Sbjct: 924 FFSQEEDRA-TFKGGRNVGLKPYVVCHLLDVHEPAGSRKIHPASTKISVRRFYRPDDISS 982
Query: 1009 EKAYCSDIREVYYSEETHLIFVEAIAGKCEVRKKNDIPACNAPAIFQHIFFCEHLHDPSK 1068
KAY SDIREVYYSE + V+ I GKCEV+KK DI + P + +H FFCEH +DP+
Sbjct: 983 AKAYVSDIREVYYSENIVKVPVDMIEGKCEVKKKIDISNSDVPVMVEHEFFCEHFYDPAT 1042
Query: 1069 GSLKQLPAHIKLRYSSGSLDSEAASRRKKGKCIEGEDELEVEKQGGASQENHLATLDIFA 1128
G+LKQLP ++KL S + A ++ KGK I D+++ +K S+EN LATLDIFA
Sbjct: 1043 GALKQLPPNVKLM--SVQQKATGALKKNKGKQICESDQVDSDKCTKVSKENRLATLDIFA 1100
Query: 1129 GCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAVMEKCGDAE 1188
GCGGLSEGLQQ+G+S TKWAIEYEEPAGEAF NHPE+ + ++NCNVIL+A+M+KCGDA+
Sbjct: 1101 GCGGLSEGLQQAGVSFTKWAIEYEEPAGEAFTKNHPEAAVFVDNCNVILKAIMDKCGDAD 1160
Query: 1189 DCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMI 1248
DC+STSEAAE AA ++ I NLP+PG+V+FINGGPPCQGFSGMNRFNQS WSKVQCEMI
Sbjct: 1161 DCISTSEAAEQAAKFSQDNIMNLPVPGEVEFINGGPPCQGFSGMNRFNQSPWSKVQCEMI 1220
Query: 1249 LAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQ 1308
LAFLSFA+YF+PR+FLLENVRNFVSFNKGQTFRLT+ASLLEMGYQVRFGILEAG FGV+Q
Sbjct: 1221 LAFLSFAEYFRPRFFLLENVRNFVSFNKGQTFRLTVASLLEMGYQVRFGILEAGTFGVAQ 1280
Query: 1309 SRKRAFIWAASPHDTLPEWPEPMHVFAAPELKIMLSDNYQYSAVRSTANGAPFRAMTVRD 1368
SRKRAFIWAA+P +TLP+WPEPMHVFA+PELKI L D Y+A +STA GAPFRA+TVRD
Sbjct: 1281 SRKRAFIWAAAPGETLPDWPEPMHVFASPELKINLPDGKYYAAAKSTAGGAPFRAITVRD 1340
Query: 1369 TIGDLPAVGNGASKTIMEYQNDPVSWFQKRIRGNMAVLTDHISKEMNELNLIRCQKIPKR 1428
TIGDLP V NGASK ++EY +P+SWFQK+IRGN L DHISKEMNELNLIRCQ+IPKR
Sbjct: 1341 TIGDLPKVENGASKLLLEYGGEPISWFQKKIRGNTIALNDHISKEMNELNLIRCQRIPKR 1400
Query: 1429 PGADWHDLPDEKVKLSTGQVVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQP 1488
PG DWHDLPDEKVKLS+GQ+VDLIPWCLPNTAKRHNQWKGL+GRLDWEGNFPTS+TDPQP
Sbjct: 1401 PGCDWHDLPDEKVKLSSGQLVDLIPWCLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQP 1460
Query: 1489 MGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHGSIQHKHRQIGNAVPPTLAFALGRKL 1548
MGKVGMCFHPDQDRI+TVRECARSQGFPD+YQF G+IQ KHRQIGNAVPP LAFALGRKL
Sbjct: 1461 MGKVGMCFHPDQDRIITVRECARSQGFPDNYQFAGNIQSKHRQIGNAVPPPLAFALGRKL 1520
Query: 1549 KEAVESKR 1556
KEAV++KR
Sbjct: 1521 KEAVDAKR 1528
>sp|Q7Y1I7|DNM1A_ORYSJ DNA (cytosine-5)-methyltransferase 1A OS=Oryza sativa subsp. japonica
GN=MET1A PE=2 SV=1
Length = 1527
Score = 1818 bits (4709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 911/1542 (59%), Positives = 1157/1542 (75%), Gaps = 52/1542 (3%)
Query: 31 KSEVPETKDSTSGQKEKMKKLSQDSEEP------RKRPKRMAACTDFKEKSVRISEKSYL 84
K + P ++ + + KK S + EP KRPKR AAC++FKEKS+ +SEK +
Sbjct: 22 KEDEPVENENLESEFDVSKKESNGATEPGNEPVASKRPKRAAACSNFKEKSLDLSEKDSI 81
Query: 85 VEAKKDQYADDEIVAVGLT--ARQDGDRPNRRLNDFILHDENGLPQPLEMLEIDDLFISG 142
+ K+ + + EI AV LT +DG +P R++ DFILHD +G QP EM E+DD+FI+
Sbjct: 82 ITIKESRVEEKEIEAVNLTRTGPEDG-QPCRKIIDFILHDGDGNLQPFEMSEVDDIFITA 140
Query: 143 LILPLQESSDREKEKGVRCEGFGRIESWSISGYEDGSPVIWLSTDIADYDCLKPASSYKK 202
LI+PL + ++++ KG+ C GFGRIE+W+ISGY++G+ VIW+ST+ +DY C+KPASSY+
Sbjct: 141 LIMPLDDDLEKDRGKGICCSGFGRIENWAISGYDEGAAVIWVSTETSDYKCVKPASSYRS 200
Query: 203 YYELFFEKARACIEVYKKLSKTSGGNSDCSIDELLAGVVRSMSGSKCFRGGVSIKDFVIS 262
Y+E F EKAR C+EVYKKL+++ GGN ++EL+AGVVRS++ ++ F G V+ KDFVIS
Sbjct: 201 YFEHFSEKARVCVEVYKKLARSVGGNPQVDLEELIAGVVRSINSNRSFNGTVT-KDFVIS 259
Query: 263 QGEFIFNQLIGLDETSKKNDQKFAELPVLVALKEESSKRENFVQVNAASLGGNLAIGSKV 322
GEFI+ QLIGLD T+ +D+ A LPVLVALK+E R F + A G L ++
Sbjct: 260 SGEFIYKQLIGLDHTAGNDDEMLATLPVLVALKDECKSRAGFTHLPAMPSNGTL----RI 315
Query: 323 GDGDGKMDQYGSSTCPADEDEDAKLARLLQEEELWQSKKQKKTQGSTSGMNKFYIKINED 382
DG K EDEDAKLARLLQEEE W+ KQ+ +G++ YIKI E
Sbjct: 316 KDGQDKG---------LTEDEDAKLARLLQEEEEWKMMKQRGKRGTS--QKNIYIKICET 364
Query: 383 EIANDYPFPVFYRPSEEEFDELLAYDSDYDSCDIDQLPRRMLHDWSLYNSDSRLISLELL 442
EIANDYP P +Y+P +E DE + +DSD D +P R+L +W+LYNSDSRLISLEL+
Sbjct: 365 EIANDYPLPAYYKPYNQEMDEYI-FDSDIGMYS-DDVPVRILDNWALYNSDSRLISLELI 422
Query: 443 PMKPCEDIDVTIFGSGKMISDEGSGFCLDTDSSQC--TSGVSGAQDAGGFPIYLSSIKEW 500
PMK + D+ +FGSG M D+GS C + +Q +S SG +D G PIYLS IKEW
Sbjct: 423 PMKAGAENDIVVFGSGFMREDDGS-CCSTAELAQLHSSSSKSGREDPG-VPIYLSPIKEW 480
Query: 501 MIEFGSSMIFISIRTDLAWYRLGKPSKQYAPWYEPVLKTARVAISIITMLKEQTRVSRLS 560
++EFG SMI I+IRTD+AWY+L +P+KQYAPW EPVLKTAR+A+SIIT+LKEQ+R S+LS
Sbjct: 481 VVEFGGSMICITIRTDVAWYKLRQPTKQYAPWCEPVLKTARLAVSIITLLKEQSRASKLS 540
Query: 561 FTDVIKRLSEIKKDQHSYISSDPAAVERYVVVHGQIVLQLFAEYPDEQIKKCAFIIGLMK 620
F +VIK+++E ++ISS VERYVVVHGQI+LQ FA++PDE +K+CAFI GL+
Sbjct: 541 FAEVIKKVAEFDSRHPAFISSKAPTVERYVVVHGQIILQQFADFPDESVKRCAFITGLLA 600
Query: 621 KMEERHHTKWLVKKKKVQKSEINLNPRASMGPVVVSKRKVMQATTTRLINRIWGEYYSNY 680
KMEE HTK +KKK Q NLNP A MGP++ ++K+M+ATTT LI++IWGEYY+ Y
Sbjct: 601 KMEESRHTKLAIKKKSQQMRGENLNPSAKMGPIL--RKKLMRATTTMLISKIWGEYYATY 658
Query: 681 SPEDGKEETACEANEDEEVEE-QGENEEDDTEEEKLISEERQISCSVAVQIKSRS--TKK 737
P D KEE + NE +E+++ Q ENE++D EEE + +E+ + + + S T+K
Sbjct: 659 FPGDTKEE---DQNEPKEIDDDQEENEDNDAEEEVNVQDEKATRTPPSTRSRKSSADTRK 715
Query: 738 EITWEGECVRK--SGLALYKKAIVHGEVVSLGSAVLVEVDELDQLPVIYFVEYMFEATGG 795
EI WEG+ K SG LYK IV +S+G+ V E D + ++ FVEYM+E G
Sbjct: 716 EIKWEGQTAGKTVSGEVLYKCVIVQDLSISVGATVTTEDDSGET--IMCFVEYMYEKLDG 773
Query: 796 CKLFHGIIMQRGSHTVLGNTANEREVFLANQCRDLELQDIKQTVVVDIRSVPWGHQHRKD 855
+ HGII+Q GS TVLGN AN+REVFL N C + E DIK+ V V+I+S+PWGH++RK+
Sbjct: 774 KNMIHGIILQEGSQTVLGNAANDREVFLTNDCLEFEASDIKELVTVNIQSLPWGHKYRKE 833
Query: 856 IANADKVDRARAEERKKKGLPTEYYCKSLYWPERGAFFILPVDSMGLGVGSCHACGTKES 915
+ A ++++A+AEERK+KGLP EY CKSLYWPE+G FF LP D +G G G C +C K
Sbjct: 834 NSEAKRIEKAKAEERKRKGLPVEYICKSLYWPEKGGFFSLPYDKIGNGTGICSSCERKPV 893
Query: 916 EKEKETFKVHSKTSFVYGTAEYFVHDYVYISPHHFTWDKAEG-ETFKAGRNVGLKPYVVC 974
E FK+ S++SFV+ Y +HD++YI P F+ + EG ET+KAGRNVGLKPY VC
Sbjct: 894 GNE---FKLLSESSFVFENITYNIHDFLYIRPEFFS--QGEGHETYKAGRNVGLKPYAVC 948
Query: 975 QLLEIIVPKEPKRAEVKSTQVKVRRFFRPDDISAEKAYCSDIREVYYSEETHLIFVEAIA 1034
LL + P ++A +ST+VKVRRF+RPDDIS+ KAY SDIREVYYSE+ + V I
Sbjct: 949 HLLSVHGPAGSRKANPESTKVKVRRFYRPDDISSTKAYSSDIREVYYSEDIISVPVVMIE 1008
Query: 1035 GKCEVRKKNDIPACNAPAIFQHIFFCEHLHDPSKGSLKQLPAHIKLRYSSGSLDSEAASR 1094
GKCEVR K+D+P + PA+ +H+F CE+L+DP+ G+LKQLP +++L + + AS+
Sbjct: 1009 GKCEVRLKDDLPNSDLPAVVEHVFCCEYLYDPANGALKQLPPNVRLVTLTRKV---PASK 1065
Query: 1095 RKKGKCIEGEDELEVEKQGGASQENHLATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEP 1154
+ KGK I + +K EN LATLDIFAGCGGLSEGLQ+SG+S TKWAIEYEEP
Sbjct: 1066 KNKGKQICDIELGGSDKPKDGQSENCLATLDIFAGCGGLSEGLQRSGLSLTKWAIEYEEP 1125
Query: 1155 AGEAFKLNHPESLMLINNCNVILRAVMEKCGDAEDCVSTSEAAELAASLDENVINNLPLP 1214
AG+AF NHPE+ + + NCNVIL+A+M+KCGD++DC+STSEAAE AA L E+ I NLP+P
Sbjct: 1126 AGDAFGENHPEAAVFVENCNVILKAIMDKCGDSDDCISTSEAAERAAKLSEDKIKNLPVP 1185
Query: 1215 GQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFQPRYFLLENVRNFVSF 1274
G+V+FINGGPPCQGFSGMNRFNQS WSKVQCEMILAFLSFA+YF+PR+FLLENVRNFVSF
Sbjct: 1186 GEVEFINGGPPCQGFSGMNRFNQSPWSKVQCEMILAFLSFAEYFRPRFFLLENVRNFVSF 1245
Query: 1275 NKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPHDTLPEWPEPMHVF 1334
NKGQTFRLTLASLLEMGYQVRFGILEAGA+GV+QSRKRAFIWAA+P +TLPEWPEPMHVF
Sbjct: 1246 NKGQTFRLTLASLLEMGYQVRFGILEAGAYGVAQSRKRAFIWAAAPGETLPEWPEPMHVF 1305
Query: 1335 AAPELKIMLSDNYQYSAVRSTANGAPFRAMTVRDTIGDLPAVGNGASKTIMEYQNDPVSW 1394
A+PELKI L D Y+AV+STA GAPFR++TVRDTIGDLPAV NGA K ++Y + PVSW
Sbjct: 1306 ASPELKITLPDGKFYAAVKSTAAGAPFRSITVRDTIGDLPAVENGAGKPTIQYGSGPVSW 1365
Query: 1395 FQKRIRGNMAVLTDHISKEMNELNLIRCQKIPKRPGADWHDLPDEKVKLSTGQVVDLIPW 1454
FQK+IR +MA L DHISKEMNELNLIRC+ IPKRPG DWHDLPDEKVKLSTGQ+VDLIPW
Sbjct: 1366 FQKKIRSDMASLNDHISKEMNELNLIRCKHIPKRPGCDWHDLPDEKVKLSTGQMVDLIPW 1425
Query: 1455 CLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQG 1514
CLPNTAKRHNQWKGL+GRLDWEGNFPTS+TDPQPMGKVGMCFHP+QDRI+TVRECARSQG
Sbjct: 1426 CLPNTAKRHNQWKGLYGRLDWEGNFPTSVTDPQPMGKVGMCFHPEQDRIITVRECARSQG 1485
Query: 1515 FPDSYQFHGSIQHKHRQIGNAVPPTLAFALGRKLKEAVESKR 1556
FPDSY+F G+IQ+KHRQIGNAVPP LA+ALGRKLK+A+++KR
Sbjct: 1486 FPDSYRFAGNIQNKHRQIGNAVPPPLAYALGRKLKQAIDAKR 1527
>sp|Q24K09|DNMT1_BOVIN DNA (cytosine-5)-methyltransferase 1 OS=Bos taurus GN=DNMT1 PE=2 SV=1
Length = 1611
Score = 544 bits (1401), Expect = e-153, Method: Compositional matrix adjust.
Identities = 323/910 (35%), Positives = 478/910 (52%), Gaps = 135/910 (14%)
Query: 739 ITWEGECVRKSGL-ALYKKAIVHGEVVSLGSAVLVEVDELDQLPVIYFVEYMFEATGGCK 797
I+W G+ V+ G + YKK + E + +G V V D+ + + V ++E + +
Sbjct: 728 ISWVGDAVKTDGKKSYYKKVCIDSETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQ 787
Query: 798 LFHGIIMQRGSHTVLGNTANEREVFLANQCRDLELQDI--KQTVVVDIRSVPWGHQHRKD 855
+FH G+ TVLG T++ E+FL ++C D++L I K V+ S W + D
Sbjct: 788 MFHAHWFCAGTDTVLGATSDPLELFLVDECEDMQLSYIHSKVQVIYKAPSENWAMEGGVD 847
Query: 856 IANADKVDRARAEERKKKGLPTEYYCKSLYWPERGAFFILPVDSMGLGVGS---CHACGT 912
D + Y L++ + A F P + C +C
Sbjct: 848 PEALMSEDDGKT------------YFYQLWYDQDYARFESPPKTQPTEDNKYKFCASCAR 895
Query: 913 KESEKEKETFKVHSKTSFVYGTA----------EYFVHDYVYISPHHFTWDKAEGETFKA 962
++KE +V + + G +Y V D VY+ P FT++ K
Sbjct: 896 LAEMRQKEIPRVVEQLQDLEGRVLYSLATKNGVQYRVGDGVYLPPEAFTFNIKLSSPVKR 955
Query: 963 GRNVGL------------------------KPYVVCQLLEIIVPKEPK-RAEVKSTQVKV 997
R + +PY + ++ EI K+ R +++V
Sbjct: 956 PRKEPVDEALYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIFCSKKSNGRPNETDIKIRV 1015
Query: 998 RRFFRPDDI--SAEKAYCSDIREVYYSEETHLIFVEAIAGKCEVRKKNDIPAC------N 1049
+F+RP++ S +Y +DI +Y+S+E ++ +A+ G+C V D+P C
Sbjct: 1016 NKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGRCTVEYGEDLPQCLQDFSAG 1075
Query: 1050 APAIFQHIFFCEHLHDPSKGSLKQLPAHIKLRYSSGSLDSEAASRRKKGKCIEGEDELEV 1109
P F +F E + SK S + P H + + G + +R K C E E E+
Sbjct: 1076 GPDRF---YFLEAYNAKSK-SFEDPPNHARSTGNKGKGKGKGKNRTKSQTCEPSELETEI 1131
Query: 1110 EKQGGASQENHLATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLML 1169
+ L TLD+F+GCGGLSEG Q+GIS T WAIE +PA +AF+LN+P S +
Sbjct: 1132 KLP-------KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNPGSTVF 1184
Query: 1170 INNCNVILRAVMEKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGF 1229
+CNV+L+ VM A E+ S + LP G V+ + GGPPCQGF
Sbjct: 1185 TEDCNVLLKLVM--------------AGEVTNSRGQK----LPQKGDVEMLCGGPPCQGF 1226
Query: 1230 SGMNRFNQSTWSKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLE 1289
SGMNRFN T+SK + ++++FLS+ DY++PRYFLLENVRNFVSF + +LTL L+
Sbjct: 1227 SGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRYFLLENVRNFVSFKRSMVLKLTLRCLVR 1286
Query: 1290 MGYQVRFGILEAGAFGVSQSRKRAFIWAASPHDTLPEWPEPMHVFA--APELKIMLSDNY 1347
MGYQ FG+L+AG +GV+Q+R+RA I AA+P + LP +PEP+HVFA A +L +++ D
Sbjct: 1287 MGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEPLPLFPEPLHVFAPRACQLSVVVDDKK 1346
Query: 1348 QYSAVRSTANGAPFRAMTVRDTIGDLPAVGNGASKTIMEYQNDPVSWFQKRIRGN--MAV 1405
S + ++G PFR +TVRDT+ DLP + NGAS + Y +P SWFQ+++RG+ +
Sbjct: 1347 FVSNITRLSSG-PFRTITVRDTMSDLPEIRNGASALEISYNGEPQSWFQRQLRGSQYQPI 1405
Query: 1406 LTDHISKEMNELNLIRCQKIPKRPGADWHDLPDEKVKLSTG------------------- 1446
L DHI K+M+ L R + IP PG+DW DLP+ +V+LS G
Sbjct: 1406 LRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTLARKLRYNYHDKKNGCSS 1465
Query: 1447 ---------------------QVVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITD 1485
Q LIPWCLP+T RHN W GL+GRL+W+G F T++T+
Sbjct: 1466 SGALRGVCSCVEGKPCEPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVTN 1525
Query: 1486 PQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHGSIQHKHRQIGNAVPPTLAFALG 1545
P+PMGK G HP+Q R+++VRECARSQGFPD+Y+ G+I KHRQ+GNAVPP LA A+G
Sbjct: 1526 PEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAIG 1585
Query: 1546 RKLKEAVESK 1555
++K + +K
Sbjct: 1586 LEIKRCMLAK 1595
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 85/190 (44%), Gaps = 10/190 (5%)
Query: 109 DRPNRRLNDFILHDENGLPQPLE--MLEID-DLFISGLILPLQESSDREKEKGVRCEGFG 165
D P +L F ++ + G P++ ++E D +L SG P+ E D E G+ + FG
Sbjct: 399 DLPQHKLTCFSVYCKRGHLCPIDTGLIEKDVELLFSGSAKPIYED-DPSPEGGINGKNFG 457
Query: 166 RIESWSISGYEDG-SPVIWLSTDIADYDCLKPASSYKKYYELFFEKARACIEVYKKLSKT 224
I W I+G++ G ++ ST A+Y + P+ Y + + EK I + K + +
Sbjct: 458 PINEWWIAGFDGGEKALLGFSTSFAEYILMDPSPEYAPLFSVMQEK----IYISKIVVEF 513
Query: 225 SGGNSDCSIDELLAGVVRSMSGSKCFRGGVSIKDFVISQGEFIFNQLIGLDETSKKNDQK 284
N D + ++L+ + ++ + +D ++ +F+ Q+ D ++Q
Sbjct: 514 LQSNPDSTYEDLINKIETTVPPCMLNLNRFT-EDSLLRHAQFVVEQVESYDRAGDSDEQP 572
Query: 285 FAELPVLVAL 294
P + L
Sbjct: 573 IFLSPCMRDL 582
>sp|P26358|DNMT1_HUMAN DNA (cytosine-5)-methyltransferase 1 OS=Homo sapiens GN=DNMT1 PE=1
SV=2
Length = 1616
Score = 543 bits (1398), Expect = e-153, Method: Compositional matrix adjust.
Identities = 324/911 (35%), Positives = 481/911 (52%), Gaps = 136/911 (14%)
Query: 739 ITWEGECVRKSGL-ALYKKAIVHGEVVSLGSAVLVEVDELDQLPVIYFVEYMFEATGGCK 797
I+W GE V+ G + YKK + E + +G V V D+ + + V ++E + +
Sbjct: 731 ISWVGEAVKTDGKKSYYKKVCIDAETLEVGDCVSVIPDDSSKPLYLARVTALWEDSSNGQ 790
Query: 798 LFHGIIMQRGSHTVLGNTANEREVFLANQCRDLELQDI--KQTVVVDIRSVPWGHQHRKD 855
+FH G+ TVLG T++ E+FL ++C D++L I K V+ S W + D
Sbjct: 791 MFHAHWFCAGTDTVLGATSDPLELFLVDECEDMQLSYIHSKVKVIYKAPSENWAMEGGMD 850
Query: 856 IANADKVDRARAEERKKKGLPTEYYCKSLYWPERGAFFILPVDSMGLGVGS---CHACGT 912
+ + D + Y L++ + A F P + C +C
Sbjct: 851 PESLLEGDDGKT------------YFYQLWYDQDYARFESPPKTQPTEDNKFKFCVSCAR 898
Query: 913 KESEKEKETFKVHSK-----TSFVYGTAE-----YFVHDYVYISPHHFTWDKAEGETFKA 962
++KE +V + + +Y +A Y V D VY+ P FT++ K
Sbjct: 899 LAEMRQKEIPRVLEQLEDLDSRVLYYSATKNGILYRVGDGVYLPPEAFTFNIKLSSPVKR 958
Query: 963 GRNVGL------------------------KPYVVCQLLEIIVPKEPK-RAEVKSTQVKV 997
R + +PY + ++ EI PK+ R +++V
Sbjct: 959 PRKEPVDEDLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIFCPKKSNGRPNETDIKIRV 1018
Query: 998 RRFFRPDDI--SAEKAYCSDIREVYYSEETHLIFVEAIAGKCEVRKKNDIPAC------N 1049
+F+RP++ S +Y +DI +Y+S+E ++ +A+ G+C V D+P C
Sbjct: 1019 NKFYRPENTHKSTPASYHADINLLYWSDEEAVVDFKAVQGRCTVEYGEDLPECVQVYSMG 1078
Query: 1050 APAIFQHIFFCEHLHDPSKGSLKQLPAHIKLRYSSGSLDSEAASRRKKGKCIEGEDELEV 1109
P F +F E + SK S + P H + + G + + K C E E+E+
Sbjct: 1079 GPNRF---YFLEAYNAKSK-SFEDPPNHARSPGNKGKGKGKGKGKPKSQACEPSEPEIEI 1134
Query: 1110 EKQGGASQENHLATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLML 1169
+ L TLD+F+GCGGLSEG Q+GIS T WAIE +PA +AF+LN+P S +
Sbjct: 1135 KLP-------KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNPGSTVF 1187
Query: 1170 INNCNVILRAVMEKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGF 1229
+CN++L+ VM A E S + LP G V+ + GGPPCQGF
Sbjct: 1188 TEDCNILLKLVM--------------AGETTNSRGQR----LPQKGDVEMLCGGPPCQGF 1229
Query: 1230 SGMNRFNQSTWSKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLE 1289
SGMNRFN T+SK + ++++FLS+ DY++PR+FLLENVRNFVSF + +LTL L+
Sbjct: 1230 SGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFKRSMVLKLTLRCLVR 1289
Query: 1290 MGYQVRFGILEAGAFGVSQSRKRAFIWAASPHDTLPEWPEPMHVFA--APELKIMLSDNY 1347
MGYQ FG+L+AG +GV+Q+R+RA I AA+P + LP +PEP+HVFA A +L +++ D
Sbjct: 1290 MGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSVVVDDKK 1349
Query: 1348 QYSAVRSTANGAPFRAMTVRDTIGDLPAVGNGASKTIMEYQNDPVSWFQKRIRGN--MAV 1405
S + ++G PFR +TVRDT+ DLP V NGAS + Y +P SWFQ+++RG +
Sbjct: 1350 FVSNITRLSSG-PFRTITVRDTMSDLPEVRNGASALEISYNGEPQSWFQRQLRGAQYQPI 1408
Query: 1406 LTDHISKEMNELNLIRCQKIPKRPGADWHDLPDEKVKLSTG------------------- 1446
L DHI K+M+ L R + IP PG+DW DLP+ +V+LS G
Sbjct: 1409 LRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVRLSDGTMARKLRYTHHDRKNGRSS 1468
Query: 1447 ----------------------QVVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSIT 1484
Q LIPWCLP+T RHN W GL+GRL+W+G F T++T
Sbjct: 1469 SGALRGVCSCVEAGKACDPAARQFNTLIPWCLPHTGNRHNHWAGLYGRLEWDGFFSTTVT 1528
Query: 1485 DPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHGSIQHKHRQIGNAVPPTLAFAL 1544
+P+PMGK G HP+Q R+++VRECARSQGFPD+Y+ G+I KHRQ+GNAVPP LA A+
Sbjct: 1529 NPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDKHRQVGNAVPPPLAKAI 1588
Query: 1545 GRKLKEAVESK 1555
G ++K + +K
Sbjct: 1589 GLEIKLCMLAK 1599
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 18/192 (9%)
Query: 111 PNRRLNDFILHDENGLPQPLEMLEID---DLFISGLILPLQESSDREKEKGVRCEGFGRI 167
P +L F ++ ++G P++ I+ +LF SG P+ + D E GV + G I
Sbjct: 403 PQHKLTCFSVYCKHGHLCPIDTGLIEKNIELFFSGSAKPIYDD-DPSLEGGVNGKNLGPI 461
Query: 168 ESWSISGYEDG-SPVIWLSTDIADYDCLKPASSYKKYYELFFEKARACIEVYKKLSKTSG 226
W I+G++ G +I ST A+Y + P+ Y + L EK I + K + +
Sbjct: 462 NEWWITGFDGGEKALIGFSTSFAEYILMDPSPEYAPIFGLMQEK----IYISKIVVEFLQ 517
Query: 227 GNSDCSIDELLAGVVRSMSGSKCFRGGVSIKDF----VISQGEFIFNQLIGLDETSKKND 282
NSD + ++L+ + ++ S G+++ F ++ +F+ Q+ DE ++
Sbjct: 518 SNSDSTYEDLINKIETTVPPS-----GLNLNRFTEDSLLRHAQFVVEQVESYDEAGDSDE 572
Query: 283 QKFAELPVLVAL 294
Q P + L
Sbjct: 573 QPIFLTPCMRDL 584
Score = 39.7 bits (91), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 119/287 (41%), Gaps = 38/287 (13%)
Query: 406 AYDSDYDSCDIDQLPRRMLHDWSLYNSDSRLISLELLPMKPCEDIDVTIFGSGKMISDEG 465
A +S ++S + LP+ L +S+Y L ++ ++ ++I++ GS K I D
Sbjct: 391 ANESGFES--YEALPQHKLTCFSVYCKHGHLCPIDTGLIE--KNIELFFSGSAKPIYD-- 444
Query: 466 SGFCLDTDSSQCTSGVSGAQDAGGFPIYLSSIKEWMIEF--GSSMIFISIRTDLAWYRLG 523
D GV+G L I EW I G I T A Y L
Sbjct: 445 -------DDPSLEGGVNGKN--------LGPINEWWITGFDGGEKALIGFSTSFAEYILM 489
Query: 524 KPSKQYAPWYEPVLKTARVAISIITMLKEQTRVSRLSFTDVIKRLSEIKKDQHSYISSDP 583
PS +YAP + L ++ IS I + Q+ S ++ D+I ++ ++
Sbjct: 490 DPSPEYAPIFG--LMQEKIYISKIVVEFLQSN-SDSTYEDLINKIETTVPPSGLNLNR-- 544
Query: 584 AAVERYVVVHGQIVLQLFAEYPD--EQIKKCAFIIGLMKKMEERHHTKWLVKKKKVQKSE 641
E ++ H Q V++ Y + + ++ F+ M+ + + ++ + ++
Sbjct: 545 -FTEDSLLRHAQFVVEQVESYDEAGDSDEQPIFLTPCMRDLIKLAGVTLGQRRAQARRQT 603
Query: 642 INLNPRASMGPVVVSKRKVMQATTTRLINRIWGEYYSNYSPEDGKEE 688
I + R R +ATTT+L+ +I+ +++ +D +E+
Sbjct: 604 IRHSTREK-------DRGPTKATTTKLVYQIFDTFFAEQIEKDDRED 643
>sp|Q92072|DNMT1_CHICK DNA (cytosine-5)-methyltransferase 1 OS=Gallus gallus GN=DNMT1 PE=1
SV=1
Length = 1537
Score = 526 bits (1355), Expect = e-148, Method: Compositional matrix adjust.
Identities = 390/1293 (30%), Positives = 615/1293 (47%), Gaps = 212/1293 (16%)
Query: 402 DELLA-YDSDYDSCD-IDQLPRRMLHDWSLYNSDSRLISLELLPMKPCEDIDVTIFGSGK 459
DE L+ +D++ D + + LP+ + +S+Y+ L + ++ +I++ G+ K
Sbjct: 294 DERLSIFDANEDGFESYEDLPQHKVTSFSVYDKRGHLCPFDTGLIE--RNIELYFSGAVK 351
Query: 460 MISDEGSGFCLDTDSSQCTSGVSGAQDAGGFPIYLSSIKEWMIEF--GSSMIFISIRTDL 517
I D+ CLD GV + L I W I G I T
Sbjct: 352 PIYDDNP--CLD-------GGVRAKK--------LGPINAWWITGFDGGEKALIGFTTAF 394
Query: 518 AWYRLGKPSKQYAPWYEPVLKTARVAISIITMLKEQTRVSRLSFTDVIKRLSEIKKDQHS 577
A Y L +PS++YAP + + + ++ ++ L+ VS + D++ ++
Sbjct: 395 ADYILMEPSEEYAPIFALMQEKIYMSKIVVEFLQNNRDVS---YEDLLNKIETTVPPVGL 451
Query: 578 YISSDPAAVERYVVVHGQIVLQLFAEYPD--EQIKKCAFIIGLMKKMEERHHTKWLVKKK 635
+ E ++ H Q V++ Y + + + I M+ + + L K++
Sbjct: 452 NFNR---FTEDSLLRHAQFVVEQVESYDEAGDSDEPPVLITPCMRDLIKLAGVT-LGKRR 507
Query: 636 KVQKSEINLNPRASMGPVVVSKRK-VMQATTTRLINRIWGEYYSNY----SPEDGKEET- 689
V++ I P + K K +ATTT+L+ I+ ++S ED KE
Sbjct: 508 AVRRQAIR-------HPTRIDKDKGPTKATTTKLVYLIFDTFFSEQIEKDEREDDKENAM 560
Query: 690 ------ACEANEDEEVEE----QGENEEDDTEEEKLISEERQISCSVAVQI--------- 730
CE + E + Q + + K +R+ ++AV+
Sbjct: 561 KRRRCGVCEVCQQPECGKCKACQNMVKFGGSGRSKQACLQRRCP-NLAVREADEDEEVDD 619
Query: 731 ---------------KSRSTKKEITWEGECVRKSGLA-LYKKAIVHGEVVSLGSAVLVEV 774
K + K I+W GE ++ G Y++ + E + +G V V
Sbjct: 620 NIPEMPSPKKMLQGRKKKQNKSRISWVGEPIKSDGKKDFYQRVCIDSETLEVGDCVSVSP 679
Query: 775 DELDQLPVIYFVEYMFEATGGCKLFHGIIMQRGSHTVLGNTANEREVFLANQCRDLELQD 834
D+ + + V M+E + G ++FH GS TVLG T++ E+FL ++C D++L
Sbjct: 680 DDPTKPLYLARVTAMWEDSSG-QMFHAHWFCPGSDTVLGATSDPLELFLVDECEDMQLSY 738
Query: 835 I--KQTVVVDIRSVPWGHQHRKDIANADKVDRARAEERKKKGLPTEYYCKSLYWPERGAF 892
I K V+ S W + D+ D R Y +++ + A
Sbjct: 739 IHGKVNVIYKPPSENWAMEGGLDMEIKMVEDDGRT------------YFYQMWYDQEYAR 786
Query: 893 FILPVDSMGLGVGS---CHACGTKESEKEKETFKV-------HSKTSFVYGT---AEYFV 939
F P + + C +C + + KE KV K + T +Y V
Sbjct: 787 FETPPRAQPMEDNKYKFCLSCARLDEVRHKEIPKVAEPLDEGDGKMFYAMATKNGVQYRV 846
Query: 940 HDYVYISPHHFTWD------------------------KAEGETFKAGRNVGLKPYVVCQ 975
D VY+ P F++ + E K PY V +
Sbjct: 847 GDSVYLLPEAFSFSMKPASPAKRPKKEAVDEDLYPEHYRKYSEYIKGSNLDAPDPYRVGR 906
Query: 976 LLEII----VPKEPKRAEVKSTQVKVRRFFRPDDI--SAEKAYCSDIREVYYSEETHLIF 1029
+ EI +P A++K +++ +F+RP++ S + Y +DI +Y+S+E +
Sbjct: 907 IKEIFCHIRTNGKPNEADIK---LRIWKFYRPENTHKSMKATYHADINLLYWSDEETTVD 963
Query: 1030 VEAIAGKCEVRKKNDIPAC---NAPAIFQHIFFCEHLHDPSKGSLKQLPAHIKLRYSSGS 1086
A+ G+C V D+ + +F E + +K S + P H + + G
Sbjct: 964 FCAVQGRCTVVYGEDLTESIQDYSAGGLDRFYFLEAYNAKTK-SFEDPPNHARSSGNKGK 1022
Query: 1087 LDSEAASRRKKGKCIEGEDELEVEKQGGASQENHLATLDIFAGCGGLSEGLQQSGISSTK 1146
+ + K E + E + + L TLD+F+GCGGLSEG Q+G+S T
Sbjct: 1023 GKGKGKGKGKGKSSTTCE---QSEPEPTELKLPKLRTLDVFSGCGGLSEGFHQAGVSETL 1079
Query: 1147 WAIEYEEPAGEAFKLNHPESLMLINNCNVILRAVMEKCGDAEDCVSTSEAAELAASLDEN 1206
WAIE EPA +AF+LN+P + + +CNV+L+ VM + E SL +
Sbjct: 1080 WAIEMWEPAAQAFRLNNPGTTVFTEDCNVLLKLVM--------------SGEKTNSLGQK 1125
Query: 1207 VINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFQPRYFLLE 1266
LP G V+ + GGPPCQGFSGMNRFN T+SK + ++++FLS+ DY++PR+FLLE
Sbjct: 1126 ----LPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLE 1181
Query: 1267 NVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPHDTLPE 1326
NVRNFVSF + +LTL L+ MGYQ FG+L+AG +GV+Q+R+RA + AA+P + LP
Sbjct: 1182 NVRNFVSFKRSMVLKLTLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIVLAAAPGEKLPM 1241
Query: 1327 WPEPMHVFA--APELKIMLSDNYQYSAVRSTANGAPFRAMTVRDTIGDLPAVGNGASKTI 1384
+PEP+HVFA A +L +++ D S + T +G PFR +TVRDT+ DLP + NGAS
Sbjct: 1242 FPEPLHVFAPRACQLSVVVDDKKFVSNITRTYSG-PFRTITVRDTMSDLPEIRNGASALE 1300
Query: 1385 MEYQNDPVSWFQKRIRGN--MAVLTDHISKEMNELNLIRCQKIPKRPGADWHDLPDEKVK 1442
+ Y +P SWFQ++IRG+ +L DHI K+M+ L R + IP PG+DW DLP+ +V+
Sbjct: 1301 ISYNGEPQSWFQRQIRGSQYQPILRDHICKDMSALVAARMRHIPLAPGSDWRDLPNIEVR 1360
Query: 1443 LSTG----------------------------------------QVVDLIPWCLPNTAKR 1462
LS G Q LIPWCLP+T R
Sbjct: 1361 LSDGTSTRKLRYTHHEKKNGRSSSGALRGVCSCAEGKPCDPADRQFNTLIPWCLPHTGNR 1420
Query: 1463 HNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFH 1522
HN W GL+GRL+W+G F T++T+P+PMGK G HP+Q R+++VRECARSQGFPD+Y+
Sbjct: 1421 HNHWAGLYGRLEWDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLF 1480
Query: 1523 GSIQHKHRQIGNAVPPTLAFALGRKLKEAVESK 1555
G+I KHRQ+GNAVPP LA A+G +++ V ++
Sbjct: 1481 GNILDKHRQVGNAVPPPLAKAIGLEIRACVGAR 1513
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 108/237 (45%), Gaps = 34/237 (14%)
Query: 95 DEIVAVGLTARQDG-----DRPNRRLNDFILHDENGLPQPLEMLEID---DLFISGLILP 146
DE +++ A +DG D P ++ F ++D+ G P + I+ +L+ SG + P
Sbjct: 294 DERLSI-FDANEDGFESYEDLPQHKVTSFSVYDKRGHLCPFDTGLIERNIELYFSGAVKP 352
Query: 147 LQESSDREKEKGVRCEGFGRIESWSISGYEDG-SPVIWLSTDIADYDCLKPASSYKKYYE 205
+ + + + GVR + G I +W I+G++ G +I +T ADY ++P+ Y +
Sbjct: 353 IYDDNPC-LDGGVRAKKLGPINAWWITGFDGGEKALIGFTTAFADYILMEPSEEYAPIFA 411
Query: 206 LFFEKARACIEVYKKLSKTSGGNSDCSIDELLAGVVRSMSGSKCFRGGVSIKDF----VI 261
L EK I + K + + N D S ++LL + ++ G++ F ++
Sbjct: 412 LMQEK----IYMSKIVVEFLQNNRDVSYEDLLNKIETTVPPV-----GLNFNRFTEDSLL 462
Query: 262 SQGEFIFNQLIGLDETSKKNDQKFAELPVLVALKEESSKRENFVQVNAASLGGNLAI 318
+F+ Q+ DE + E PVL+ + + +++ +LG A+
Sbjct: 463 RHAQFVVEQVESYDEAGDSD-----EPPVLI-----TPCMRDLIKLAGVTLGKRRAV 509
>sp|Q27746|DNMT1_PARLI DNA (cytosine-5)-methyltransferase PliMCI OS=Paracentrotus lividus
GN=DNMT PE=2 SV=1
Length = 1612
Score = 518 bits (1334), Expect = e-145, Method: Compositional matrix adjust.
Identities = 328/967 (33%), Positives = 492/967 (50%), Gaps = 132/967 (13%)
Query: 685 GKEETACEANE--DEEVEEQGENEED--DTEEEKLISEERQISCSVAVQIKSRSTKK-EI 739
GK + AC+ + V+E EN+ D D K +E++ ++ + K+ ++
Sbjct: 660 GKAKQACKDRRCPNMAVQEADENDIDEMDNSSNKENKDEKKAKKGRKLETPLKKKKRAKV 719
Query: 740 TWEGECVRKSG-LALYKKAIVHGEVVSLGSAVLVEVDELDQLPVIYFVEYMFEATGGCKL 798
TW E + A YK A++ E + +G VL+ D+ + + V YM++ + G +
Sbjct: 720 TWLDEPTEVTEERAYYKAAMLDDEKIEIGDCVLIHPDDPTKPLFMARVIYMWQESQGEMM 779
Query: 799 FHGIIMQRGSHTVLGNTANEREVFLANQCRDLELQDIKQTVVVDIRSVPWGHQHRKDIAN 858
FH GS TVLG T++ EVF ++C+D L + V ++ P D +
Sbjct: 780 FHAQWFVYGSETVLGETSDPLEVFPIDECQDTYLGSVNAKCTVIYKAPP------NDWSM 833
Query: 859 ADKVDRARAEERKKKGLPTEYYCKSLYWPERGAF-----FILPVDSMGLGVGSCHACGTK 913
+D + K+ ++ + Y PE F + P D SC C
Sbjct: 834 IGGIDDPETDHVIKEDDGKTFFYQKWYDPELARFEDYEVLMAPDDIPAHRFCSC--CLKN 891
Query: 914 ESEKEKETFKVHSK------------TSFVYGTAEYFVHDYVYISPHHFTWD-------- 953
E +EKET + +K +S+ Y E+ + D VY+ P F+++
Sbjct: 892 ERAQEKETARPGAKLEDQDDSSKVLYSSWHYKGNEFQIGDGVYLLPEVFSFNIKQKVVTK 951
Query: 954 -----------------KAEGETFKAGRNVGLKPYVVCQLLEIIVPKEPKRAEVKSTQVK 996
+ E K +P+ + +++ I K + +++
Sbjct: 952 KPVSKKDVDEDLYPENYRKSSEYVKGSNLECPEPFRIGKIISIYTTK-----SNSTVRLR 1006
Query: 997 VRRFFRPDDISAEK--AYCSDIREVYYSEETHLIFVEAIAGKCEVRKKNDIPACN--APA 1052
V + +RP+D + AY +D+ +Y+SEE + +E + GKC V D+ A
Sbjct: 1007 VNKMYRPEDTHKGRTAAYQADLNVLYWSEEEAVTELEVVQGKCSVVCAEDLNVSTDEYSA 1066
Query: 1053 IFQHIFFCEHLHDPSKGSLKQLPAHIKLRYSSGSLDSEAASRRKKGKCIEGEDELEVEKQ 1112
H F+ +D + + P+ + S + + + K + E E EK+
Sbjct: 1067 GGPHKFYFREAYDSERKCFEDPPS----KSRSTRMKGKGKGKGKGKAKGKIAVEKEEEKE 1122
Query: 1113 GGASQENHLATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINN 1172
+ N L LD+FAGCGGLSEG Q+GI + WAIE EEPA +A++LN+P S + ++
Sbjct: 1123 STETPFNKLKCLDVFAGCGGLSEGFHQAGICESSWAIEKEEPAAQAYRLNNPGSTVFSDD 1182
Query: 1173 CNVILRAVMEKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGM 1232
CN +LR VM+ E T + LP G V+ + GGPPCQGFSGM
Sbjct: 1183 CNELLRLVMQ----GEKTSRTGQ--------------KLPQKGDVELLCGGPPCQGFSGM 1224
Query: 1233 NRFNQSTWSKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGY 1292
NRFN +SK + +I ++LS+ DY++PR+FLLENVRNFVS+ K +L L L+ MGY
Sbjct: 1225 NRFNSREYSKFKNSLISSYLSYCDYYRPRFFLLENVRNFVSYKKNMVLKLALRCLIRMGY 1284
Query: 1293 QVRFGILEAGAFGVSQSRKRAFIWAASPHDTLPEWPEPMHVFA--APELKIMLSDNYQYS 1350
Q FGIL+AG +GV Q+R+RA I AA+P + LP +PEP+HVF+ A L +M+ + +
Sbjct: 1285 QCTFGILQAGQYGVPQTRRRAIILAAAPGEKLPFYPEPLHVFSSRACSLSVMIGEK-KIE 1343
Query: 1351 AVRSTANGAPFRAMTVRDTIGDLPAVGNGASKTIMEYQNDPVSWFQKRIRGN--MAVLTD 1408
+ AP+R +TVRDT+ DLP + NGA K + Y +P S FQK+IRGN +L D
Sbjct: 1344 SNNQWCLSAPYRTITVRDTMSDLPTINNGAQKLEISYDGEPQSDFQKKIRGNQYQPILRD 1403
Query: 1409 HISKEMNELNLIRCQKIPKRPGADWHDLPDEKVKLSTG---------------------- 1446
HI K+M+ L R + IP PG+DW DLP+ V L G
Sbjct: 1404 HICKDMSSLVAARMKHIPLAPGSDWRDLPNIPVTLKDGTTCRKLRYTHKDKKNGKSSTGA 1463
Query: 1447 ------------------QVVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQP 1488
Q LIPWCLP+T RHN W GL+GRL+W+G F T++T+P+P
Sbjct: 1464 LRGVCSCAEGDACDPSDRQFSTLIPWCLPHTGNRHNNWAGLYGRLEWDGFFSTTVTNPEP 1523
Query: 1489 MGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHGSIQHKHRQIGNAVPPTLAFALGRKL 1548
MGK G HP+Q R+++VRECARSQGFPD+Y+F GSI KHRQIGNAVPP +A A+G ++
Sbjct: 1524 MGKQGRVLHPEQHRVVSVRECARSQGFPDTYRFFGSILDKHRQIGNAVPPPMAAAIGMEI 1583
Query: 1549 KEAVESK 1555
K +++K
Sbjct: 1584 KVCLQTK 1590
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 89/190 (46%), Gaps = 12/190 (6%)
Query: 109 DRPNRRLNDFILHDENGLPQPLE--MLEID-DLFISGLILPLQESSDREKEKGVRCEGFG 165
+R ++ +F ++D++ + M+E + +L+ SG + P+ + + E G+ + G
Sbjct: 388 ERLQHKITNFCVYDKSTHICAFDRGMIEKNKELYFSGYVKPIYDD-NPSTEGGIPTKRIG 446
Query: 166 RIESWSISGYEDG-SPVIWLSTDIADYDCLKPASSYKKYYELFFEKARACIEVYKKLSKT 224
I W +G++ G +I ST A+Y + P+ YK ++ EK I + K L +
Sbjct: 447 PINEWYTTGFDGGHKALIGFSTAFAEYIVMSPSEEYKPFWTAVQEK----IYMSKILIEF 502
Query: 225 SGGNSDCSIDELLAGVVRSMSGSKCFRGGVSIKDFVISQGEFIFNQLIGLDETSKKNDQK 284
N D ++LL + ++ C R +D ++ +F+ Q+ D+ + +++
Sbjct: 503 LQNNVDPVYEDLLTQIETTVPPEGCNR---FTEDSLLRHAQFVVEQVESYDDAADRDEVL 559
Query: 285 FAELPVLVAL 294
+P + L
Sbjct: 560 LITMPCMRDL 569
>sp|P13864|DNMT1_MOUSE DNA (cytosine-5)-methyltransferase 1 OS=Mus musculus GN=Dnmt1 PE=1
SV=5
Length = 1620
Score = 509 bits (1311), Expect = e-143, Method: Compositional matrix adjust.
Identities = 315/911 (34%), Positives = 478/911 (52%), Gaps = 141/911 (15%)
Query: 735 TKKEITWEGECVR-KSGLALYKKAIVHGEVVSLGSAVLVEVDELDQLPVIYFVEYMFEAT 793
K I+W G+ ++ + Y+K + E++ +G V V D+ + + V ++E
Sbjct: 730 NKDRISWLGQPMKIEENRTYYQKVSIDEEMLEVGDCVSVIPDDSSKPLYLARVTALWEDK 789
Query: 794 GGCKLFHGIIMQRGSHTVLGNTANEREVFLANQCRDLELQDI--KQTVVVDIRSVPWGHQ 851
G +FH G+ TVLG T++ E+FL +C +++L I K V+ S W +
Sbjct: 790 NGQMMFHAHWFCAGTDTVLGATSDPLELFLVGECENMQLSYIHSKVKVIYKAPSENWAME 849
Query: 852 HRKDIANADKVDRARAEERKKKGLPTEYYCKSLYWPERGAFFILPVDSMGLGVGS---CH 908
D + AE+ K Y L++ + A F P + C
Sbjct: 850 GGTD----PETTLPGAEDGKT-------YFFQLWYNQEYARFESPPKTQPTEDNKHKFCL 898
Query: 909 ACGTKESEKEKETFKVHSK----------TSFVYGTAEYFVHDYVYISPHHFTWDKAEGE 958
+C ++KE KV + +S Y + D VY+ P FT++
Sbjct: 899 SCIRLAELRQKEMPKVLEQIEEVDGRVYCSSITKNGVVYRLGDSVYLPPEAFTFNIKVAS 958
Query: 959 TFK-----------------------AGRNV-GLKPYVVCQLLEIIVPKEPKRAEVKSTQ 994
K G N+ +PY + ++ EI K K+ +V
Sbjct: 959 PVKRPKKDPVNETLYPEHYRKYSDYIKGSNLDAPEPYRIGRIKEIHCGK--KKGKVNEAD 1016
Query: 995 VKVR--RFFRPDDI--SAEKAYCSDIREVYYSEETHLIFVEAIAGKCEVRKKNDIP---- 1046
+K+R +F+RP++ S +Y +DI +Y+S+E ++ + G+C V D+
Sbjct: 1017 IKLRLYKFYRPENTHRSYNGSYHTDINMLYWSDEEAVVNFSDVQGRCTVEYGEDLLESIQ 1076
Query: 1047 --ACNAPAIFQHIFFCEHLHDPSKGSLKQLPAHIK--LRYSSGSLDSEAASRRKKGKCIE 1102
+ P F +F E + +K + + P H + G + + + + E
Sbjct: 1077 DYSQGGPDRF---YFLEAYNSKTK-NFEDPPNHARSPGNKGKGKGKGKGKGKHQVSEPKE 1132
Query: 1103 GEDELEVEKQGGASQENHLATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLN 1162
E +++ K L TLD+F+GCGGLSEG Q+GIS T WAIE +PA +AF+LN
Sbjct: 1133 PEAAIKLPK---------LRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLN 1183
Query: 1163 HPESLMLINNCNVILRAVMEKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFING 1222
+P + + +CNV+L+ VM A E+ SL + LP G V+ + G
Sbjct: 1184 NPGTTVFTEDCNVLLKLVM--------------AGEVTNSLGQR----LPQKGDVEMLCG 1225
Query: 1223 GPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRL 1282
GPPCQGFSGMNRFN T+SK + ++++FLS+ DY++PR+FLLENVRNFVS+ + +L
Sbjct: 1226 GPPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSYRRSMVLKL 1285
Query: 1283 TLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPHDTLPEWPEPMHVFA--APELK 1340
TL L+ MGYQ FG+L+AG +GV+Q+R+RA I AA+P + LP +PEP+HVFA A +L
Sbjct: 1286 TLRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLS 1345
Query: 1341 IMLSDNYQYSAVRSTANGAPFRAMTVRDTIGDLPAVGNGASKTIMEYQNDPVSWFQKRIR 1400
+++ D S + ++G PFR +TVRDT+ DLP + NGAS + + Y +P+SWFQ+++R
Sbjct: 1346 VVVDDKKFVSNITRLSSG-PFRTITVRDTMSDLPEIQNGASNSEIPYNGEPLSWFQRQLR 1404
Query: 1401 GN--MAVLTDHISKEMNELNLIRCQKIPKRPGADWHDLPDEKVKLSTG------------ 1446
G+ +L DHI K+M+ L R + IP PG+DW DLP+ +V+L G
Sbjct: 1405 GSHYQPILRDHICKDMSPLVAARMRHIPLFPGSDWRDLPNIQVRLGDGVIAHKLQYTFHD 1464
Query: 1447 ----------------------------QVVDLIPWCLPNTAKRHNQWKGLFGRLDWEGN 1478
Q LIPWCLP+T RHN W GL+GRL+W+G
Sbjct: 1465 VKNGYSSTGALRGVCSCAEGKACDPESRQFSTLIPWCLPHTGNRHNHWAGLYGRLEWDGF 1524
Query: 1479 FPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHGSIQHKHRQIGNAVPP 1538
F T++T+P+PMGK G HP+Q R+++VRECARSQGFPDSY+F G+I +HRQ+GNAVPP
Sbjct: 1525 FSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDSYRFFGNILDRHRQVGNAVPP 1584
Query: 1539 TLAFALGRKLK 1549
LA A+G ++K
Sbjct: 1585 PLAKAIGLEIK 1595
Score = 48.1 bits (113), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 84/190 (44%), Gaps = 10/190 (5%)
Query: 109 DRPNRRLNDFILHDENGLPQPLEMLEID---DLFISGLILPLQESSDREKEKGVRCEGFG 165
D P R F ++ G P++ I+ +L+ SG + + + E G+ + G
Sbjct: 407 DSPMHRFTSFSVYCSRGHLCPVDTGLIEKNVELYFSGCAKAIHDENP-SMEGGINGKNLG 465
Query: 166 RIESWSISGYEDGSPV-IWLSTDIADYDCLKPASSYKKYYELFFEKARACIEVYKKLSKT 224
I W +SG++ G V I ST A+Y ++P+ Y+ + L EK I + K + +
Sbjct: 466 PINQWWLSGFDGGEKVLIGFSTAFAEYILMEPSKEYEPIFGLMQEK----IYISKIVVEF 521
Query: 225 SGGNSDCSIDELLAGVVRSMSGSKCFRGGVSIKDFVISQGEFIFNQLIGLDETSKKNDQK 284
N D ++L+ + ++ S + +D ++ +F+ +Q+ DE ++
Sbjct: 522 LQNNPDAVYEDLINKIETTVPPSTINVNRFT-EDSLLRHAQFVVSQVESYDEAKDDDETP 580
Query: 285 FAELPVLVAL 294
P + AL
Sbjct: 581 IFLSPCMRAL 590
>sp|Q9Z330|DNMT1_RAT DNA (cytosine-5)-methyltransferase 1 OS=Rattus norvegicus GN=Dnmt1
PE=1 SV=2
Length = 1622
Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust.
Identities = 307/915 (33%), Positives = 461/915 (50%), Gaps = 148/915 (16%)
Query: 735 TKKEITWEGECVR-KSGLALYKKAIVHGEVVSLGSAVLVEVDELDQLPVIYFVEYMFEAT 793
K I+W GE V+ + Y K + E + +G V V D+ + + V ++E
Sbjct: 731 NKDRISWLGEPVKIEENRTYYWKVSIDEETLEVGDCVSVIPDDPSKPLYLARVTALWEDK 790
Query: 794 GGCKLFHGIIMQRGSHTVLGNTANEREVFLANQCRDLELQDIKQTVVVDIR--SVPWGHQ 851
G ++FH G+ TVLG T++ E+FL +C +++L I V V R S W +
Sbjct: 791 NG-QMFHAHWFCAGTDTVLGATSDPLELFLVGECENMQLSYIHSKVKVIYRGPSPNWAME 849
Query: 852 HRKDIANADKVDRARAEERKKKGLPTEYYCKSLYWPERGAFFILPVDSMGLGVGS---CH 908
D + AE+ K T +Y ++ + A F P + C
Sbjct: 850 GGMD----PEAMLPGAEDGK-----TYFY--QFWYSQDYARFESPPKTQPAEDNKHKFCL 898
Query: 909 ACGTKESEKEKETFKVHSK----------TSFVYGTAEYFVHDYVYISPHHFTWDKAEGE 958
+C ++KE KV + +S Y + D VY+ P FT++
Sbjct: 899 SCIRLAELRQKEMPKVLEQLEEVDGRVYCSSITKNGVVYRLGDSVYLPPEAFTFNIKMAS 958
Query: 959 TFK------------------------AGRNV-GLKPYVVCQLLEIIVPKEPKRAEVKST 993
K G N+ +PY + ++ EI K+ K +V
Sbjct: 959 PMKRSKRDPVNENPVPRDTYRKYSDYIKGSNLDAPEPYRIGRIKEIYCGKK-KGGKVNEA 1017
Query: 994 QVKVR--RFFRPDDI--SAEKAYCSDIREVYYSEETHLIFVEAIAGKCEVRKKNDIP--- 1046
+K+R +F+RP++ S + Y +DI +Y+S+E ++ + G+C V D+
Sbjct: 1018 DIKIRLYKFYRPENTHKSIQATYHADINLLYWSDEEAVVDFSDVQGRCTVEYGEDLLESI 1077
Query: 1047 ---ACNAPAIFQHIFFCEHLHDPSKGSLKQLPAHIKLRYSSGSLDSEAASRRKKGKCIEG 1103
+ P F +F E + +K S + P H + + G + + K
Sbjct: 1078 QDYSQGGPDRF---YFLEAYNSKTK-SFEDPPNHARSPGNKGKGKGKGKGKGKPQVSEPK 1133
Query: 1104 EDELEVEKQGGASQENHLATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNH 1163
E E A + L TLD+F+GCGGL+EG Q+GIS T WAIE EPA +AF+LN+
Sbjct: 1134 EPE-------AAIKLPKLRTLDVFSGCGGLTEGFHQAGISETLWAIEMWEPAAQAFRLNN 1186
Query: 1164 PESLMLINNCNVILRAVMEKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGG 1223
P + + +CNV+L+ VM A E+ SL + LP G V+ + GG
Sbjct: 1187 PGTTVFTEDCNVLLKLVM--------------AGEVTNSLGQR----LPQKGDVEMLCGG 1228
Query: 1224 PPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLT 1283
PPCQGFSGMNRFN T+SK + ++++FLS+ DY++PR+FLLENVRNFVSF + +LT
Sbjct: 1229 PPCQGFSGMNRFNSRTYSKFKNSLVVSFLSYCDYYRPRFFLLENVRNFVSFRRSMVLKLT 1288
Query: 1284 LASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPHDTLPEWPEPMHVFA--APELKI 1341
L L+ MGYQ FG+L+AG +GV+Q+R+RA I AA+P + LP +PEP+HVFA A +L +
Sbjct: 1289 LRCLVRMGYQCTFGVLQAGQYGVAQTRRRAIILAAAPGEKLPLFPEPLHVFAPRACQLSV 1348
Query: 1342 MLSDNYQYSAVRSTANGAPFRAMTVRDTIGDLPAVGNGASKTIMEYQNDPVSWFQKRIRG 1401
++ D S + ++G PFR +T+RDT+ DLP + NGAS + Y+ W +
Sbjct: 1349 VVDDKKFVSNITRLSSG-PFRTITMRDTMSDLPEIQNGASAPEISYK-----WRATVLVP 1402
Query: 1402 NMA---VLTDHISKEMNELNL----IRCQKIPKRPGADWHDLPDEKVKLSTGQVVD---- 1450
A L H +++ R + IP PG+DW DLP+ +V+L G + +
Sbjct: 1403 EAAARVALPAHPQGPYPQVHERAGGCRMRHIPLSPGSDWRDLPNIQVRLRDGVITNKLRY 1462
Query: 1451 ------------------------------------LIPWCLPNTAKRHNQWKGLFGRLD 1474
LIPWCLP+T RHN W GL+GRL+
Sbjct: 1463 TFHDTKNGCSSTGALRGVCSCAEGKTCDPASRQFNTLIPWCLPHTGNRHNHWAGLYGRLE 1522
Query: 1475 WEGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHGSIQHKHRQIGN 1534
W+G F T++T+P+PMGK G HP+Q R+++VRECARSQGFPD+Y+ G+I +HRQ+GN
Sbjct: 1523 WDGFFSTTVTNPEPMGKQGRVLHPEQHRVVSVRECARSQGFPDTYRLFGNILDRHRQVGN 1582
Query: 1535 AVPPTLAFALGRKLK 1549
AVPP LA A+G ++K
Sbjct: 1583 AVPPPLAKAIGLEIK 1597
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 137 DLFISGLILPLQESSDREKEKGVRCEGFGRIESWSISGYEDG-SPVIWLSTDIADYDCLK 195
+L+ SG+ + E + E GV + G I W ISG++ G +I ST A+Y ++
Sbjct: 438 ELYFSGVAKAIHEENP-SVEGGVNGKNLGPINQWWISGFDGGEKALIGFSTAFAEYFLME 496
Query: 196 PASSYKKYYELFFEKARACIEVYKKLSKTSGGNSDCSIDELLAGVVRSMSGSKCFRGGVS 255
P+ Y + L EK I + K + + N D ++L+ + ++ S
Sbjct: 497 PSPEYAPIFGLMQEK----IYISKIVVEFLQSNPDAVYEDLINKIETTVPPS-AINVNRF 551
Query: 256 IKDFVISQGEFIFNQLIGLDETSKKNDQKFAELPVLVAL 294
+D ++ +F+ +Q+ D+ ++ P + +L
Sbjct: 552 TEDSLLRHAQFVVSQVESYDDAKDDDETPIFLSPCMRSL 590
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 82/203 (40%), Gaps = 27/203 (13%)
Query: 494 LSSIKEWMIEF--GSSMIFISIRTDLAWYRLGKPSKQYAPWYEPVLKTARVAISIITMLK 551
L I +W I G I T A Y L +PS +YAP + L ++ IS I +
Sbjct: 464 LGPINQWWISGFDGGEKALIGFSTAFAEYFLMEPSPEYAPIFG--LMQEKIYISKIVVEF 521
Query: 552 EQTRVSRLSFTDVIKRLSEIKKDQHSYISSDPAAVERY----VVVHGQIVLQLFAEYPD- 606
Q+ + + D+I ++ + + V R+ ++ H Q V+ Y D
Sbjct: 522 LQSNPDAV-YEDLINKI-------ETTVPPSAINVNRFTEDSLLRHAQFVVSQVESYDDA 573
Query: 607 -EQIKKCAFIIGLMKKMEERHHTKWLVKKKKVQKSEINLNPRASMGPVVVSKRKVMQATT 665
+ + F+ M+ L+ V + R + V ++ +ATT
Sbjct: 574 KDDDETPIFLSPCMRS---------LIHLAGVSLGQRRATRRTVINSAKVKRKGPTKATT 624
Query: 666 TRLINRIWGEYYSNYSPEDGKEE 688
T+L+ +I+ ++S +D KE+
Sbjct: 625 TKLVYQIFDTFFSEQIEKDDKED 647
>sp|Q94F87|CMT2_ARATH DNA (cytosine-5)-methyltransferase CMT2 OS=Arabidopsis thaliana
GN=CMT2 PE=2 SV=3
Length = 1295
Score = 225 bits (573), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 195/372 (52%), Gaps = 38/372 (10%)
Query: 1211 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFQPRYFLLENV 1268
LPLPG+V I GGPPCQG SG NR S + + + I+ F+ +Y +P Y L+ENV
Sbjct: 900 LPLPGRVGVICGGPPCQGISGYNRHRNVDSPLNDERNQQIIVFMDIVEYLKPSYVLMENV 959
Query: 1269 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPHDTLPEWP 1328
+ + +KG R L+ L+ M YQ R GI+ AG +G+SQ R R F+W A P+ LP +P
Sbjct: 960 VDILRMDKGSLGRYALSRLVNMRYQARLGIMTAGCYGLSQFRSRVFMWGAVPNKNLPPFP 1019
Query: 1329 EPMH-VFAAPELKIMLSDNYQYSAVRSTANGAPF---RAMTVRDTIGDLPAVGNGASKTI 1384
P H V L + N V + A G P +A+ ++D I DLP V N +
Sbjct: 1020 LPTHDVIVRYGLPLEFERN-----VVAYAEGQPRKLEKALVLKDAISDLPHVSNDEDREK 1074
Query: 1385 MEYQNDPVSWFQKRIRGNMAVLT---------------DHISKEMNELNLIRCQKIPKRP 1429
+ Y++ P + FQ+ IR LT DH +NE + R +IPKR
Sbjct: 1075 LPYESLPKTDFQRYIRSTKRDLTGSAIDNCNKRTMLLHDHRPFHINEDDYARVCQIPKRK 1134
Query: 1430 GADWHDLPDEKVKLST-GQVVDLIPWCLPNTAK---------RHNQWKGLFGRLDWEGNF 1479
GA++ DLP V+ +T + + P LP+ + + K F RL W+
Sbjct: 1135 GANFRDLPGLIVRNNTVCRDPSMEPVILPSGKPLVPGYVFTFQQGKSKRPFARLWWDETV 1194
Query: 1480 PTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHGSIQHKHRQIGNAVPPT 1539
PT +T P + HP+QDR+LT+RE AR QGFPD +QF G+I+ ++ QIGNAV +
Sbjct: 1195 PTVLTVPTCHSQA--LLHPEQDRVLTIRESARLQGFPDYFQFCGTIKERYCQIGNAVAVS 1252
Query: 1540 LAFALGRKLKEA 1551
++ ALG L A
Sbjct: 1253 VSRALGYSLGMA 1264
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 97/231 (41%), Gaps = 35/231 (15%)
Query: 949 HFTWDKAEGETFKAGRNVGLK----PYVVCQLLEIIVPKEPKRAEVKSTQVKVRRFFRPD 1004
H++ K +G TF G +K V Q++E + + +V+ F+R
Sbjct: 569 HYSQAKVDGHTFSLGDFAYIKGEEEETHVGQIVEFF------KTTDGESYFRVQWFYRAT 622
Query: 1005 DISAEK-AYCSDIREVYYSEETHLIFVEAIAGKCEVRKKNDIPACNAPAIFQHIFF-CEH 1062
D E+ A D R ++YS + V+ + K V + + +I +F E+
Sbjct: 623 DTIMERQATNHDKRRLFYSTVMNDNPVDCLISKVTVLQVSPRVGLKPNSIKSDYYFDMEY 682
Query: 1063 LHDPSKGSLKQLP--AHIKLRYSSGSLDSEAASRRKKGKCIEGEDELEVEKQGGASQENH 1120
+ S + P + KL + + +E+ K K GE
Sbjct: 683 CVEYSTFQTLRNPKTSENKLECCADVVPTESTESILKKKSFSGE---------------- 726
Query: 1121 LATLDIFAGCGGLSEGL----QQSGIS-STKWAIEYEEPAGEAFKLNHPES 1166
L LD+++GCGG+S GL + SG+ TKWA++ A ++ KLNHP +
Sbjct: 727 LPVLDLYSGCGGMSTGLSLGAKISGVDVVTKWAVDQNTAACKSLKLNHPNT 777
>sp|Q94F88|CMT3_ARATH DNA (cytosine-5)-methyltransferase CMT3 OS=Arabidopsis thaliana
GN=CMT3 PE=1 SV=2
Length = 839
Score = 217 bits (552), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 131/378 (34%), Positives = 196/378 (51%), Gaps = 46/378 (12%)
Query: 1211 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFQPRYFLLENV 1268
LPLPG VD + GGPPCQG SG NRF + + +L +++ +Y +P++ L+ENV
Sbjct: 445 LPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEYLKPKFVLMENV 504
Query: 1269 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPHDTLPEWP 1328
+ + KG R + LL+M YQVR G++ AGA+G++Q R R F+W A P + +P++P
Sbjct: 505 VDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWGALPSEIIPQFP 564
Query: 1329 EPMH--VFAAPELKIMLSDNYQYSAVRSTANGAPFRAMTVRDTIGDLPAVGNGASKTIME 1386
P H V +K + Y + + ++D I DLPAV N + +
Sbjct: 565 LPTHDLVHRGNIVKEFQGNIVAYDEGHTVKLA---DKLLLKDVISDLPAVANSEKRDEIT 621
Query: 1387 YQNDPVSWFQK--RIRGNMA------------VLTDHISKEMNELNLIRCQKIPKRPGAD 1432
Y DP + FQK R+R + A VL DH +N + R ++PKR GA+
Sbjct: 622 YDKDPTTPFQKFIRLRKDEASGSQSKSKSKKHVLYDHHPLNLNINDYERVCQVPKRKGAN 681
Query: 1433 WHDLP---------------DEKVKLSTGQVVDLIPWCLPNTAKRHNQWKGL--FGRLDW 1475
+ D P E+VKL +G+ + +P+ A + K FGRL W
Sbjct: 682 FRDFPGVIVGPGNVVKLEEGKERVKLESGKTL------VPDYALTYVDGKSCKPFGRLWW 735
Query: 1476 EGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHGSIQHKHRQIGNA 1535
+ PT +T +P +V HP+Q+R+L++RE AR QGFPD Y+ G + K+ Q+GNA
Sbjct: 736 DEIVPTVVTRAEPHNQV--IIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQKYIQVGNA 793
Query: 1536 VPPTLAFALGRKLKEAVE 1553
V +A ALG L A +
Sbjct: 794 VAVPVAKALGYALGTAFQ 811
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 12/177 (6%)
Query: 998 RRFFRPDD-ISAEKAYCSDIREVYYSEETHLIFVEAIAGKCEVR--KKNDIPACNAPAIF 1054
R F+RP D + E + V++SE + + K + N+ PA
Sbjct: 147 RWFYRPSDTVMKEFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLNENTKETIPATE 206
Query: 1055 QHIFFCEHLHDPSKGSLKQLPAHIKLRYSSGSLDSEAASRRKKGKCIEGEDELEVEKQGG 1114
FFC+ + + + + + S S S R+ I E E +G
Sbjct: 207 NCDFFCDMNYFLPYDTFEAIQQETMMAISESSTISSDTDIREGAAAISEIGECSQETEG- 265
Query: 1115 ASQENHLATLDIFAGCGGLSEGL----QQSGIS-STKWAIEYEEPAGEAFKLNHPES 1166
LD+++GCG +S GL Q SG++ TKWA++ A ++ + NHPE+
Sbjct: 266 ---HKKATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPET 319
>sp|Q9ARI6|CMT2_MAIZE DNA (cytosine-5)-methyltransferase 2 OS=Zea mays GN=ZMET5 PE=2 SV=1
Length = 915
Score = 216 bits (549), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 193/673 (28%), Positives = 290/673 (43%), Gaps = 146/673 (21%)
Query: 998 RRFFRPDDISAEK-------AYCSDIREVYYSEETHLIFVEAIAGKCEVRKKNDIPACNA 1050
R FFR +D + D R V+ SEE + ++ I K ++ + P +
Sbjct: 227 RWFFRAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVD--PNMDP 284
Query: 1051 PAIFQHIFFCEHLHDPSKGSLKQLPAHIKLRYSSGSLDSEAASRRKKGKCIEGEDE-LEV 1109
A Q I C+ +D S A+I +G SE AS I +D LE
Sbjct: 285 KAKAQLIEHCDLYYDMSYSVAYSTFANIS--SENGQSGSETAS------GISSDDAGLET 336
Query: 1110 EKQGGASQENHLATLDIFAGCGGLSEGL----QQSGIS-STKWAIEYEEPAGEAFKLNHP 1164
E LD+++GCGG+S GL SG+ T+WA++ A ++ K NHP
Sbjct: 337 SSN---MPERTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHP 393
Query: 1165 ES----------LMLINNCNVILRAVMEKCGDAEDCVSTSEAAELAASLDEN-------- 1206
++ L L+ V+ + + D + ++ SE E A +LD++
Sbjct: 394 QTEVRNEKADEFLALLKEWAVLCEKYVHQ--DVDSNLAGSEDQEDADTLDKDEFVVQKLI 451
Query: 1207 ------------------------------VINNL---PL-----------------PGQ 1216
I+NL PL PG
Sbjct: 452 GIRYDGTGRKKGVYFKVQWEEYGPEEDTWEPIDNLSDCPLKIREFVQEGRKRKILPLPGD 511
Query: 1217 VDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFQPRYFLLENVRNFVSF 1274
VD I GGPPCQG SG NRF + + ++ F+ Y +P+Y L+ENV + + F
Sbjct: 512 VDVICGGPPCQGISGFNRFRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKF 571
Query: 1275 NKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPHDTLPEWPEPMHVF 1334
G + L+ L+ M YQ R G++ AG +G+ Q R R F+W A LP++P P +
Sbjct: 572 ADGYLGKYALSCLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDV 631
Query: 1335 ----AAPEL--KIMLS-DNYQYSAVRSTANGAPFRAMTVRDTIGDLPAVGNGASKTIMEY 1387
AP + M++ D Q +++ +A+ + D DLP V N +MEY
Sbjct: 632 VVRGGAPNAFSQCMVAYDETQRPSLK--------KALLLGDAFSDLPKVENHQPNDVMEY 683
Query: 1388 QNDPVSWFQKRIR----------------GNMAVLTDHISKEMNELNLIRCQKIPKRPGA 1431
P + FQ+ IR + L DH +N + R ++IP + GA
Sbjct: 684 GGSPKTEFQRYIRLGRKDMLDWSFGEEAGPDEGKLLDHQPLRLNNDDYERVKQIPVKKGA 743
Query: 1432 DWHDLPDEKVKLSTGQVVDLIPWC-----------LPNTAKRHNQWKGL--FGRLDWEGN 1478
++ DL + VK+ VV+ P +P+ A + K L FGRL W+
Sbjct: 744 NFRDL--KGVKVGANNVVEWDPEVERVYLSSGKPLVPDYAMSFIKGKSLKPFGRLWWDQT 801
Query: 1479 FPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHGSIQHKHRQIGNAVPP 1538
PT +T +P +V HP Q R+LT+RE AR QGFPD Y+ G I+ K+ Q+GNAV
Sbjct: 802 VPTVVTRAEPHNQV--ILHPTQARVLTIRENARLQGFPDYYRLFGPIKEKYIQVGNAVAV 859
Query: 1539 TLAFALGRKLKEA 1551
+A ALG L +A
Sbjct: 860 PVARALGYCLGQA 872
>sp|Q8LPU5|CMT3_MAIZE DNA (cytosine-5)-methyltransferase 3 OS=Zea mays GN=DMT105 PE=2 SV=1
Length = 915
Score = 215 bits (548), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 193/673 (28%), Positives = 290/673 (43%), Gaps = 146/673 (21%)
Query: 998 RRFFRPDDISAEK-------AYCSDIREVYYSEETHLIFVEAIAGKCEVRKKNDIPACNA 1050
R FFR +D + D R V+ SEE + ++ I K ++ + P +
Sbjct: 227 RWFFRAEDTVINSLVSINVDGHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVD--PNMDP 284
Query: 1051 PAIFQHIFFCEHLHDPSKGSLKQLPAHIKLRYSSGSLDSEAASRRKKGKCIEGEDE-LEV 1109
A Q I C+ +D S A+I +G SE AS I +D LE
Sbjct: 285 KAKAQLIEHCDLYYDMSYSVAYSTFANIS--SENGQSGSETAS------GISSDDAGLET 336
Query: 1110 EKQGGASQENHLATLDIFAGCGGLSEGL----QQSGIS-STKWAIEYEEPAGEAFKLNHP 1164
E LD+++GCGG+S GL SG+ T+WA++ A ++ K NHP
Sbjct: 337 SSN---MPERTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDLNSFACQSLKYNHP 393
Query: 1165 ES----------LMLINNCNVILRAVMEKCGDAEDCVSTSEAAELAASLDEN-------- 1206
++ L L+ V+ + + D + ++ SE E A +LD++
Sbjct: 394 QTEVRNEKADEFLALLKEWAVLCEKYVHQ--DVDSNLAGSEDQEDADTLDKDEFVVQKLI 451
Query: 1207 ------------------------------VINNL---PL-----------------PGQ 1216
I+NL PL PG
Sbjct: 452 GIRYDGTGRKKGVYFKVQWEGYGPEEDTWEPIDNLSDCPLKIREFVQEGRKRKILPLPGD 511
Query: 1217 VDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFQPRYFLLENVRNFVSF 1274
VD I GGPPCQG SG NRF + + ++ F+ Y +P+Y L+ENV + + F
Sbjct: 512 VDVICGGPPCQGISGFNRFRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENVVDILKF 571
Query: 1275 NKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPHDTLPEWPEPMHVF 1334
G + L+ L+ M YQ R G++ AG +G+ Q R R F+W A LP++P P +
Sbjct: 572 ADGYLGKYALSCLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYPLPTYDV 631
Query: 1335 ----AAPEL--KIMLS-DNYQYSAVRSTANGAPFRAMTVRDTIGDLPAVGNGASKTIMEY 1387
AP + M++ D Q +++ +A+ + D DLP V N +MEY
Sbjct: 632 VVRGGAPNAFSQCMVAYDETQRPSLK--------KALLLGDAFSDLPKVENHQPNDVMEY 683
Query: 1388 QNDPVSWFQKRIR----------------GNMAVLTDHISKEMNELNLIRCQKIPKRPGA 1431
P + FQ+ IR + L DH +N + R ++IP + GA
Sbjct: 684 GGSPKTEFQRYIRLGRKDMLDWSFGEEAGPDEGKLLDHQPLRLNNDDYERVKQIPVKKGA 743
Query: 1432 DWHDLPDEKVKLSTGQVVDLIPWC-----------LPNTAKRHNQWKGL--FGRLDWEGN 1478
++ DL + VK+ VV+ P +P+ A + K L FGRL W+
Sbjct: 744 NFRDL--KGVKVGANNVVEWDPEVERVYLSSGKPLVPDYAMSFIKGKSLKPFGRLWWDET 801
Query: 1479 FPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHGSIQHKHRQIGNAVPP 1538
PT +T +P +V HP Q R+LT+RE AR QGFPD Y+ G I+ K+ Q+GNAV
Sbjct: 802 VPTVVTRAEPHNQV--ILHPTQARVLTIRENARLQGFPDYYRLFGPIKEKYIQVGNAVAV 859
Query: 1539 TLAFALGRKLKEA 1551
+A ALG L +A
Sbjct: 860 PVARALGYCLGQA 872
>sp|Q9AXT8|CMT1_MAIZE DNA (cytosine-5)-methyltransferase 1 OS=Zea mays GN=MET2A PE=1 SV=1
Length = 912
Score = 206 bits (525), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 133/383 (34%), Positives = 194/383 (50%), Gaps = 58/383 (15%)
Query: 1211 LPLPGQVDFINGGPPCQGFSGMNRFNQ--STWSKVQCEMILAFLSFADYFQPRYFLLENV 1268
LPLPG VD I GGPPCQG SG NR+ + + ++ F+ Y +P+Y L+ENV
Sbjct: 502 LPLPGDVDVICGGPPCQGISGFNRYRNRDEPLKDEKNKQMVTFMDIVAYLKPKYVLMENV 561
Query: 1269 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPHDTLPEWP 1328
+ + F G + L+ L+ M YQ R G++ AG +G+ Q R R F+W A LP++P
Sbjct: 562 VDILKFADGYLGKYALSCLVAMKYQARLGMMVAGCYGLPQFRMRVFLWGALSSMVLPKYP 621
Query: 1329 EPMHVF----AAPEL--KIMLS-DNYQYSAVRSTANGAPFRAMTVRDTIGDLPAVGNGAS 1381
P + AP + M++ D Q +++ +A+ + D I DLP V N
Sbjct: 622 LPTYDVVVRGGAPNAFSQCMVAYDETQKPSLK--------KALLLGDAISDLPKVQNHQP 673
Query: 1382 KTIMEYQNDPVSWFQKRIR----------------GNMAVLTDHISKEMNELNLIRCQKI 1425
+MEY P + FQ+ IR + L DH +N + R Q+I
Sbjct: 674 NDVMEYGGSPKTEFQRYIRLSRKDMLDWSFGEGAGPDEGKLLDHQPLRLNNDDYERVQQI 733
Query: 1426 PKRPGADWHDL--------------PD-EKVKLSTGQVVDLIPWCLPNTAKRHNQWKGL- 1469
P + GA++ DL P+ E+VKLS+G+ + +P+ A + K L
Sbjct: 734 PVKKGANFRDLKGVRVGANNIVEWDPEIERVKLSSGKPL------VPDYAMSFIKGKSLK 787
Query: 1470 -FGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHGSIQHK 1528
FGRL W+ PT +T +P +V HP Q R+LT+RE AR QGFPD Y+ G I+ K
Sbjct: 788 PFGRLWWDETVPTVVTRAEPHNQV--IIHPTQARVLTIRENARLQGFPDYYRLFGPIKEK 845
Query: 1529 HRQIGNAVPPTLAFALGRKLKEA 1551
+ Q+GNAV +A ALG L +A
Sbjct: 846 YIQVGNAVAVPVARALGYCLGQA 868
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 28/183 (15%)
Query: 998 RRFFRPDD--------ISAEKAYCSDIREVYYSEETHLIFVEAIAGKCEVRKKNDIPACN 1049
R FFR +D IS + + D R V+ SEE + ++ I K ++ + P +
Sbjct: 223 RWFFRAEDTVINSLVSISVD-GHKHDPRRVFLSEEKNDNVLDCIISKVKIVHVD--PNMD 279
Query: 1050 APAIFQHIFFCEHLHDPSKGSLKQLPAHIKLRYSSGSLDSEAASRRKKGKCIEGEDELEV 1109
A Q I C+ +D S A+I +G S+ AS G +V
Sbjct: 280 PKAKAQLIESCDLYYDMSYSVAYSTFANIS--SENGQSGSDTAS---------GISSDDV 328
Query: 1110 EKQGGASQENHLATL-DIFAGCGGLSEGL----QQSGIS-STKWAIEYEEPAGEAFKLNH 1163
+ + +S ATL D+++GCGG+S GL SG+ T+WA+++ A ++ K NH
Sbjct: 329 DLETSSSMPTRTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 388
Query: 1164 PES 1166
P++
Sbjct: 389 PQT 391
>sp|O49139|CMT1_ARATH Putative DNA (cytosine-5)-methyltransferase CMT1 OS=Arabidopsis
thaliana GN=CMT1 PE=5 SV=2
Length = 791
Score = 195 bits (495), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 128/369 (34%), Positives = 190/369 (51%), Gaps = 46/369 (12%)
Query: 1211 LPLPGQVDFINGGPPCQGFSGMNRF--NQSTWSKVQCEMILAFLSFADYFQPRYFLLENV 1268
LPLPG V + GGPPCQG SG NR+ N++ + + +L FL D+ +P Y L+ENV
Sbjct: 402 LPLPGTVYTVCGGPPCQGISGYNRYRNNEAPLEDQKNQQLLVFLDIIDFLKPNYVLMENV 461
Query: 1269 RNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPHDTLPEWP 1328
+ + F+KG R +AS + M YQ R G++ AG++G+ Q R R F+WAA P + LP +P
Sbjct: 462 VDLLRFSKGFLARHAVASFVAMNYQTRLGMMAAGSYGLPQLRNRVFLWAAQPSEKLPPYP 521
Query: 1329 EPMH----VFAAP-ELKIMLSDNYQYSAVRSTANGAPFRAMTVRDTIGDLPAVGNGASKT 1383
P H F P E K + Q ++ A+T+ D I DLP V N +
Sbjct: 522 LPTHEVAKKFNTPKEFKDLQVGRIQMEFLKLD------NALTLADAISDLPPVTNYVAND 575
Query: 1384 IMEYQN-DPVSWFQKRI---RGNMAV----------LTDHISKEMNELNLIRCQKIPKRP 1429
+M+Y + P + F+ I R + L DH + + +L R IPK+
Sbjct: 576 VMDYNDAAPKTEFENFISLKRSETLLPAFGGDPTRRLFDHQPLVLGDDDLERVSYIPKQK 635
Query: 1430 GADWHDLPDEKV-------------KLSTGQVVDLIPWCLPNTAKRHNQWKGLFGRLDWE 1476
GA++ D+P V KL +G+ +++P + K + K FGRL +
Sbjct: 636 GANYRDMPGVLVHNNKAEINPRFRAKLKSGK--NVVPAYAISFIK--GKSKKPFGRLWGD 691
Query: 1477 GNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHGSIQHKHRQIGNAV 1536
T +T +P + HP Q+R+L+VRE AR QGFPD Y+ G+I+ K+ Q+GNAV
Sbjct: 692 EIVNTVVTRAEPHNQC--VIHPMQNRVLSVRENARLQGFPDCYKLCGTIKEKYIQVGNAV 749
Query: 1537 PPTLAFALG 1545
+ ALG
Sbjct: 750 AVPVGVALG 758
Score = 40.8 bits (94), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 5/48 (10%)
Query: 1124 LDIFAGCGGLSEGL----QQSGIS-STKWAIEYEEPAGEAFKLNHPES 1166
LD+++GCG +S G SG+ TKW+++ + A ++ KLNHPE+
Sbjct: 228 LDLYSGCGAMSTGFCMGASISGVKLITKWSVDINKFACDSLKLNHPET 275
>sp|P94147|MTA1_RUEGE Modification methylase AgeI OS=Ruegeria gelatinovora GN=ageIM PE=3
SV=1
Length = 429
Score = 174 bits (440), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 140/471 (29%), Positives = 216/471 (45%), Gaps = 82/471 (17%)
Query: 1121 LATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAV 1180
+ T+D+F G GGL EG +Q+G S+ +A ++E PA +K NHP+++ C+
Sbjct: 1 MKTIDLFCGAGGLGEGFRQAGFSAL-YANDHETPALATYKENHPDAV-----CST----- 49
Query: 1181 MEKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1240
D + T + ++ L PGQVD + GGPPCQGFS + Q
Sbjct: 50 --------DSIETVDPKKIREDLGVA-------PGQVDVVMGGPPCQGFS---TYGQRRD 91
Query: 1241 SKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1300
+ ++ + + F + F+P+ FL+ENV +S + G +A +GY L+
Sbjct: 92 DDARNQLYVPYFGFVEEFRPKAFLIENVVGLLSMSGGAVLADMVARAEALGYAADVVTLD 151
Query: 1301 AGAFGVSQSRKRAFIWAASPHDTLPEWPEPMHVFAAPELKIMLSDNYQYSAVRSTANGAP 1360
A +GV Q R+R FI+ A+ + + P+P HV ++L+D Q S + P
Sbjct: 152 ACEYGVPQHRRRVFIFGAADGQRI-DPPQPSHV-NGKRSGVVLND--QPSLFFDGPSIQP 207
Query: 1361 FRAMTVRDTIGDLP--AVGNGASKTIMEYQNDPVSWFQKRIRGNMAVLTDHISKEMNELN 1418
A+TVRD I DLP + ++ MEY P + +Q+ +RGN LT H +K M +
Sbjct: 208 --ALTVRDAISDLPDEVLVPRDTQKPMEYPEPPKTEYQRLMRGNSTELTHHSAKRMLGIR 265
Query: 1419 LIRCQKIPKRPGADWHDLPDEKVKLSTGQVVD-LIPWCLPNTAKR--------------- 1462
+R + PG D+ +E +L+ G + D LI + R
Sbjct: 266 RLRLAML--HPG-DYGTKIEE--RLADGGLNDELIDLMMGGAGMRDAAECRTQDREKEAA 320
Query: 1463 --------------------HNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCF-HPDQD 1501
+ + RL W+ T + M + F HP D
Sbjct: 321 LREVLKGGHTTPAKVMEFLDSQGFANKYRRLRWDAPSHTVVAH---MARDCSDFVHPGID 377
Query: 1502 RILTVRECARSQGFPDSYQFHGSIQHKHRQIGNAVPPTLAFALGRKLKEAV 1552
R ++VRE AR Q FPD+Y+F GS + RQIGNAVPP L A+ +K A+
Sbjct: 378 RFVSVREAARFQSFPDTYRFPGSQFRQFRQIGNAVPPLLGRAMAETIKVAI 428
>sp|P52311|MTX2_XANOR Modification methylase XorII OS=Xanthomonas oryzae pv. oryzae (strain
KACC10331 / KXO85) GN=xorIIM PE=3 SV=2
Length = 424
Score = 119 bits (299), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/452 (25%), Positives = 182/452 (40%), Gaps = 111/452 (24%)
Query: 1124 LDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAVMEK 1183
+D+FAG GGLS G +Q+G A++ + A K N P+ C + ++V++
Sbjct: 7 IDLFAGAGGLSLGFEQAGFDLVA-AVDIDPIHCAAHKFNFPK-------CATVCKSVVDV 58
Query: 1184 CGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKV 1243
GD E +A ++ D + GG PCQGFS + +
Sbjct: 59 TGD--------ELRRIAGIGKRDI----------DIVIGGAPCQGFSLIGK---RALDDS 97
Query: 1244 QCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQV--RFGILEA 1301
+ +++ ++ +P+YF+ ENV+ Q + + + GY V + +L A
Sbjct: 98 RNQLVHHYVRVVMELKPKYFVFENVKGLTVGKHRQFLKEVIEAFQNGGYDVVTDYRVLNA 157
Query: 1302 GAFGVSQSRKRAFIWAASPHDTLPEWPEPMHVFAAPELKIMLSDNYQYSAVRSTANGAPF 1361
+GV Q R+R + A LP +PEP
Sbjct: 158 ADYGVPQDRRRLILMGARKGLPLPAYPEPTG----------------------------- 188
Query: 1362 RAMTVRDTIGDLPAVGN--------------GASKTIMEY----QNDPVSWFQKRIRGNM 1403
TV D IGD+P + G T Y ++DP + +R M
Sbjct: 189 -RTTVGDAIGDIPDAESFPELWERDWVKAKYGKPSTYAAYLRGKKDDPTDFGYRRQFDPM 247
Query: 1404 AVLTDHISKEMNELNLIRCQKIPKRPGADWHDLPDEKVKLSTGQVVDLIPWCLPNTAKRH 1463
+LT + + EL+ R I PD+ +S + + L C NT +
Sbjct: 248 -LLTGSLLTDHTELSRQRFAAI----------APDDVEPVSRFKKLALNGIC--NTLRA- 293
Query: 1464 NQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHG 1523
G G F T P+P+ HP R++TVRE AR +PD ++FH
Sbjct: 294 -------GTASDRGAF----TSPRPI-------HPTVPRVITVREAARLHSYPDWFRFHA 335
Query: 1524 SIQHKHRQIGNAVPPTLAFALGRKLKEAVESK 1555
+ H RQIGN+VPP LA A+G ++ +A+ K
Sbjct: 336 TKWHGFRQIGNSVPPLLARAVGGQIMKALRKK 367
>sp|O52702|MTA1_ACEPA Modification methylase ApaLI OS=Acetobacter pasteurianus GN=apaLIM
PE=3 SV=1
Length = 429
Score = 119 bits (299), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/435 (27%), Positives = 187/435 (42%), Gaps = 70/435 (16%)
Query: 1123 TLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAVME 1182
+ +FAG GG S G Q+G+ + E A + ++ N V
Sbjct: 7 VVSLFAGAGGFSSGFSQAGLKPL-FGAEINADACQTYQEN-----------------VGS 48
Query: 1183 KCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSK 1242
C + +++D + I L + + GGPPCQGFS N ++
Sbjct: 49 PCHQLD-----------LSTVDPSHIEMLTGGKRPFVVIGGPPCQGFSTAGPRN---FAD 94
Query: 1243 VQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAG 1302
+ +I +L+ + PR+ + ENV ++ G+ + ++MGY VR +
Sbjct: 95 PRNLLIFNYLNIVERLSPRWLIFENVEGLLTSGGGRDLARLVREFVDMGYSVRLQKVNLA 154
Query: 1303 AFGVSQSRKRAFIWAASPHDTLPEWPEPMHVFAAPELKIMLSDNYQYSAVRSTANGAPFR 1362
A+GV Q+RKR I ++PE ++ F + + K A+G P
Sbjct: 155 AYGVPQTRKRVLIIGNRLGIDF-QFPEELYSFDSGKAK--------------KASGKPL- 198
Query: 1363 AMTVRDTIGDLPAVGNGASKTIMEYQNDPVSWFQKRIR-GN-MAVLTDHISKEMNELNLI 1420
A ++ + + L + + ++PV+ F R+R GN + V+T H+ E E
Sbjct: 199 APSLAEAVAGLGPAASDKDALVPYASSEPVNAFDARMRAGNRVEVVTHHVRVEAAE---- 254
Query: 1421 RCQKIPKRPGADWHDLPDE-----KVKLSTGQVVDLIPWCLPNTAKRHNQWKGLFGRLDW 1475
R Q +PG DLP E + + +V D P T KR G+ RL
Sbjct: 255 RMQVELLKPGQTMKDLPPELWHESYRRRANRRVSDGTP-----TEKRGGAPSGI-KRL-- 306
Query: 1476 EGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHGSIQHKHRQIGNA 1535
GN S+T P + HP + R LT+RECAR Q FPD Y++ G+ +QIGNA
Sbjct: 307 HGNL-QSLTITGPAAR--EFIHPTEHRPLTIRECARIQTFPDKYRWVGNNASVIQQIGNA 363
Query: 1536 VPPTLAFALGRKLKE 1550
VPP A L + L++
Sbjct: 364 VPPLAAERLAKHLRD 378
>sp|P05302|MTD1_DESNO Modification methylase DdeI OS=Desulfomicrobium norvegicum (strain
DSM 1741 / NCIMB 8310) GN=ddeIM PE=3 SV=1
Length = 415
Score = 119 bits (298), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 114/447 (25%), Positives = 184/447 (41%), Gaps = 100/447 (22%)
Query: 1121 LATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAV 1180
+ +D+FAGCGG S G + +G +S AIE + A + + N+P N +VI
Sbjct: 1 MNIIDLFAGCGGFSHGFKMAGYNSI-LAIEKDLWASQTYSFNNP-------NVSVI---- 48
Query: 1181 MEKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1240
ED ++T + +L S+ + VD I GGPPCQGFS +Q
Sbjct: 49 ------TED-ITTLDPGDLKISVSD-----------VDGIIGGPPCQGFSLSGNRDQ--- 87
Query: 1241 SKVQCEMILAFLSFADYFQPRYFLLENVRNFVSF-NKGQTF--RLTLASLLEMGYQVRFG 1297
+ + + F+ F +F P++F++ENV +S K + + + +GY+V
Sbjct: 88 KDPRNSLFVDFVRFVKFFSPKFFVMENVLGILSMKTKSRQYVKDIIAEEFSNVGYKVCVI 147
Query: 1298 ILEAGAFGVSQSRKRAFIWAASPHDTLPEWPEPMHVFAAPELKIMLSDNYQYSAVRSTAN 1357
IL A +GV QSR+R F L + P K++ S+
Sbjct: 148 ILNACDYGVPQSRQRVFFIGLKSDRPLNQQ------ILTPPSKVIESE------------ 189
Query: 1358 GAPFRAMTVRDTIGDLPAVGNGASKTIMEYQNDPVSWFQKRIRGNMAVLTDHISKEMNEL 1417
++ + I DLP + G + +Y P + +Q+ +R + +H++ +
Sbjct: 190 -----YTSLEEAISDLPVIEAGEGGEVQDYPVAPRNKYQENMRKGSTCVYNHVAMRHTQ- 243
Query: 1418 NLIRCQKIPKRPGADWHDLPDEKVKLSTGQVVDLIPWCLPNTAKRHNQWK-----GLFGR 1472
L D + GQ V + ++ H+Q K + G+
Sbjct: 244 -----------------RLVDRFAAIKFGQSVK-------HVSEEHSQRKRGDANSISGK 279
Query: 1473 LDWEGNFPTSITDPQPMGKVGM---CFHPDQDRILTVRECARSQGFPDSYQFHGSIQ--- 1526
+ + N P P HP +R T RE AR Q FPD+Y F G
Sbjct: 280 VFSQNNMRPYPYKPCPTVAASFQSNFIHPFYNRNFTAREGARIQSFPDTYIFQGKRTTMS 339
Query: 1527 -----HKHRQIGNAVPPTLAFALGRKL 1548
+++QIGNAVPP LA AL ++
Sbjct: 340 WEKHLSQYQQIGNAVPPLLAQALAERI 366
>sp|P25265|MTD2_HERAU Modification methylase HgiDII OS=Herpetosiphon aurantiacus GN=hgiDIIM
PE=3 SV=1
Length = 354
Score = 114 bits (285), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 111/436 (25%), Positives = 176/436 (40%), Gaps = 101/436 (23%)
Query: 1122 ATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAVM 1181
A +D+F G GGL+ GL G I+ + A++ N+ +
Sbjct: 4 AVIDLFCGVGGLTHGLILEGFGVLA-GIDNDPSCKYAYEQNNRTRFI------------- 49
Query: 1182 EKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTWS 1241
E +S + EL A N Q + G PCQ FS ++ + + +
Sbjct: 50 ------EKSISEVDGRELNALYPNN---------QHKILVGCAPCQDFS---QYTKKSRT 91
Query: 1242 KVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEA 1301
+ +++ F +P +ENV +FN+G+ F + SL ++GY V ++
Sbjct: 92 GTKWQLLTEFSRLIREIEPDIISMENVPEVRTFNRGEVFNNFIQSLEQLGYHVSHSVVHC 151
Query: 1302 GAFGVSQSRKRAFIWAASPHDTLPEWPEPMHVFAAPELKIMLSDNYQYSAVRSTANGAPF 1361
+G+ Q R R ++AA + + P H PE NY+
Sbjct: 152 PDYGIPQQRDRLVLFAAK--QGVIKIIPPTH---TPE-------NYR------------- 186
Query: 1362 RAMTVRDTIGDLPAVGNGASKTIMEYQNDPVSWFQKRIRGNMAVLTDHISKEMNELNLIR 1421
TVRD IG L +G ++ D + H + + ++NL R
Sbjct: 187 ---TVRDVIGSLATNYSGG-----HWEGDSM----------------HAASRLEDINLRR 222
Query: 1422 CQKIPKRPGADWHDLPDEKVKLSTGQVVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPT 1481
Q PG W D P+E LI C + + + ++GR++W+ PT
Sbjct: 223 IQH--SVPGGTWADWPEE-----------LIAEC--HKKESGESYGSVYGRMEWDKVAPT 267
Query: 1482 SITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQF--HGSIQHK--HRQIGNAVP 1537
T G G HP+QDR +++RE A Q FP SYQF G ++ K RQIGNAVP
Sbjct: 268 ITTQCNGYGN-GRFGHPEQDRAISLREAALLQTFPRSYQFAPEGQLKFKTVSRQIGNAVP 326
Query: 1538 PTLAFALGRKLKEAVE 1553
L + + +K +E
Sbjct: 327 VALGRVIAKSIKRFLE 342
>sp|P50192|MTHA_HAEPH Modification methylase HphIA OS=Haemophilus parahaemolyticus
GN=hphIAM PE=3 SV=1
Length = 372
Score = 113 bits (283), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 175/425 (41%), Gaps = 107/425 (25%)
Query: 1121 LATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAV 1180
L +D+F+G GG S G ++G ++E E + ++ N P+ +L
Sbjct: 45 LTYIDLFSGAGGFSLGFDRAGFHQL-LSVEIEPHYCDTYRANFPDHQVL----------- 92
Query: 1181 MEKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1240
+D + S D+N++ ++ +VD + GGPPCQGFS + ++
Sbjct: 93 ------QQDLTTLS---------DDNLLRHIN-HRKVDVVIGGPPCQGFSMAGKIGRTFA 136
Query: 1241 SKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1300
+ + F+ QP++F++ENV + N G+T +GY+V+ +L
Sbjct: 137 DDPRNHLFKEFVRVVKLTQPKFFVMENVARLFTHNSGKTRAEITEQFERLGYKVKCKVLN 196
Query: 1301 AGAFGVSQSRKRAFIWAASPHDTLPEWPEPMHVFAAPELKIMLSDNYQYSAVRSTANGAP 1360
A FGV Q R R ++ +PEP H +Y+
Sbjct: 197 AADFGVPQLRSR-IVFIGRKDGGEITFPEPSHT--------------EYN---------- 231
Query: 1361 FRAMTVRDTIGDLPAVGNGASKTIMEYQNDPVSWFQKRIRGNMAVLTDHISKEMNELNLI 1420
TV D IG P + G + I+ ++ +H ++ + +++ +
Sbjct: 232 ----TVGDAIGHFPKLNAGENSLILNHE-----------------AMNHSTQMLEKMSFV 270
Query: 1421 RCQKIPKRPGADWHDLPDEKVKLSTGQVVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFP 1480
+ G D +D+P E ++ +G V I R++ K
Sbjct: 271 -------KNGGDRNDIP-ESLRPISGDVRKYI---------RYHSDK------------- 300
Query: 1481 TSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHGSIQHKHRQIGNAVPPTL 1540
S+ M KV FH +Q+R LTVRE A Q FPD + F G + +Q+GNAVPP L
Sbjct: 301 PSVCVTGDMRKV---FHYEQNRALTVRELAALQSFPDDFVFLGKKIAQQQQVGNAVPPLL 357
Query: 1541 AFALG 1545
A A+
Sbjct: 358 AQAIA 362
>sp|P23737|MTS9_STAAU Modification methylase Sau96I OS=Staphylococcus aureus GN=sau96IM
PE=3 SV=1
Length = 430
Score = 105 bits (263), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 162/405 (40%), Gaps = 103/405 (25%)
Query: 1144 STKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAVMEKCGDAEDCVSTSEAAELAASL 1203
ST A+E ++ A E ++N P+ ++ N+ I A L +
Sbjct: 121 STYGAVEIDKNAAETLRINRPKWKVIENDIEFI-------------------ADNLDEFI 161
Query: 1204 DENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFQPRYF 1263
DE ++D ++GG PCQ FS + N ++ + + + +P+ F
Sbjct: 162 DE----------EIDILSGGYPCQTFSYAGKRN--GFADTRGTLFYPYSKILSKLKPKAF 209
Query: 1264 LLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPHDT 1323
+ ENVR V+ + G+T + L ++ GY+V + IL + + V+Q R+R I D
Sbjct: 210 IAENVRGLVNHDDGKTLEVMLKVFIKEGYEVYWNILNSWNYDVAQKRERIVIIGIR-EDL 268
Query: 1324 LPEWPEPMHVFAAPELKIMLSDNYQYSAVRSTANGAPFRAMTVRDTIGDLPAVGNGASKT 1383
+ E P A K +L +D + D+P
Sbjct: 269 VKEQKYPFRFPLAQVYKPVL-----------------------KDVLKDVPK-------- 297
Query: 1384 IMEYQNDPVSWFQKRIRGNMAVLTDHISKEMNELNLIRCQKIPKRPGADWHDLPDEKVKL 1443
+ +T + K+ + L+ PG W DLP++ K
Sbjct: 298 --------------------SKVTAYSDKKREVMKLVP-------PGGCWVDLPEQIAKD 330
Query: 1444 STGQVVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRI 1503
G+ W KR G+ R+ W+ T T P + C HPD+ R
Sbjct: 331 YMGK-----SW-YSGGGKR-----GMARRISWDEPCLTLTTSPS-QKQTERC-HPDETRP 377
Query: 1504 LTVRECARSQGFPDSYQFHGSIQHKHRQIGNAVPPTLAFALGRKL 1548
++RE AR Q FPD ++F G + ++RQIGNAVP LA +G+ L
Sbjct: 378 FSIREYARIQSFPDEWEFSGGVGAQYRQIGNAVPVNLAKYIGKSL 422
>sp|Q8EL95|MT36_OCEIH Putative modification methylase OB3336 OS=Oceanobacillus iheyensis
(strain DSM 14371 / JCM 11309 / KCTC 3954 / HTE831)
GN=OB3336 PE=3 SV=1
Length = 460
Score = 97.1 bits (240), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 125/492 (25%), Positives = 191/492 (38%), Gaps = 113/492 (22%)
Query: 1123 TLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLN-------HPESLMLINNCNV 1175
+D+F+GCGGL+ G Q +G + K IE + A + N H L NN
Sbjct: 17 VVDLFSGCGGLALGFQLAGFNIRK-GIELDRDASDVASFNLHWRQGKHDRHL---NNDIT 72
Query: 1176 ILRAVMEKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRF 1235
+L A E LD N+L + GGPPCQ +S + R
Sbjct: 73 LL-----------------SANEFYNDLDRK--NDL-------IVIGGPPCQAYSKIGRA 106
Query: 1236 NQSTWSK-------VQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLL 1288
+ + + ++ FL +A + ++ENV V++ L+
Sbjct: 107 KLKSLGEERRQENDARGKLYENFLDYALHVDANVIVMENVPEAVNYGGVNIPDTVCDILI 166
Query: 1289 EMGYQVRFGILEAGAFGVSQSRKRAFIWAASPH-DTLPEWPEPMHVFAAPELKI------ 1341
GY + +L A FGV Q+R R F+ A + PEP H P + +
Sbjct: 167 NKGYDAIWTVLNAADFGVPQTRVRLFVMAIKKDIGKIKFIPEPTH---KPHINVKRQSVN 223
Query: 1342 ---MLSD--NYQYSAVRSTANGAPFRAMTVRDTIGDLPAV--------GNGASKTIMEYQ 1388
M S+ N +Y + + +TV D IGDLP + N + EY+
Sbjct: 224 VRWMQSEIRNSKYYKQPNIPDETLSDWVTVGDAIGDLPNLFPVYNQKYKNYKPMMMKEYK 283
Query: 1389 NDPVSWFQKRIR---------GNMAVLTDH---ISKEMNE-----------LNLIRCQK- 1424
+ P + FQK +R GNM T I +M E ++L+R +
Sbjct: 284 SPPQNTFQKLMRINNKVDKVTGNMFRNTKRDFSIFDKMEEGDNYLDAHNIAMSLLRKEMR 343
Query: 1425 ---IPKRPGADWHDLPDEKVKLSTGQVVDLIPWCLPNTAKRHNQWKGLFGRLDWEGNFPT 1481
I K ++ L D V P+ T K +W+ L + P+
Sbjct: 344 KSGITKENEFEYRLLKDRIVP----------PYS---TEKFVEKWRKL------SSDKPS 384
Query: 1482 SITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHGSIQHKHRQIGNAVPPTLA 1541
HP + R ++VRE AR Q FPD + F S+ +QIGNAVPP LA
Sbjct: 385 HTLVAHLSTDTYSHLHPREPRGISVREAARLQSFPDDFLFDCSMGAAFKQIGNAVPPLLA 444
Query: 1542 FALGRKLKEAVE 1553
A+ +K+ ++
Sbjct: 445 KAIAEAMKKNIQ 456
>sp|P25263|MTC1_HERAU Modification methylase HgiCI OS=Herpetosiphon aurantiacus GN=hgiCIM
PE=3 SV=2
Length = 420
Score = 95.9 bits (237), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 115/457 (25%), Positives = 181/457 (39%), Gaps = 101/457 (22%)
Query: 1121 LATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAV 1180
L +D+FAG GG+ G +Q+
Sbjct: 2 LKFIDLFAGIGGMRLGFEQA---------------------------------------- 21
Query: 1181 MEKCGDAEDCVSTSEAAELAASL-----------DENVINNLPLPGQVDFINGGPPCQGF 1229
M + G CV +SE + A + D I + P DF+ G PCQ F
Sbjct: 22 MHELGIETACVLSSEIDKHAQTTYAMNFHEQSQGDITQIQDFP---SFDFLLAGFPCQPF 78
Query: 1230 SGMNRFNQSTWSKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLE 1289
S + Q + + + ++P+ FLLENVR + +KG+TF+ L L E
Sbjct: 79 SYAGK--QKGFGDTRGTLFFEIERILKAYRPKGFLLENVRGLTTHDKGRTFKTILQKLHE 136
Query: 1290 MGYQVRFGILEAGAFGVSQSRKRAFIWAASPHDTLPEWPEPMHVFAAPELKIMLSDNYQY 1349
+ Y V + IL + F V Q+R R +I + PE H+ A +D++++
Sbjct: 137 LNYGV-YLILNSSNFQVPQNRLRVYIVGLD--QSQPELTITSHIGA--------TDSHKF 185
Query: 1350 SAVRSTAN-GAPFRAMTVRDTIGDLPAVGNGAS----KTIMEYQNDPVSWFQKRI----R 1400
+ + A+ + M VRD + D P S ++ + P+ KR+
Sbjct: 186 KQLSNQASLFDTNKIMLVRDILEDHPLDKYNCSTDFVNKLLAFIGHPIKLNGKRLIDYRN 245
Query: 1401 GN------MAVLTDHISKEMNELNLIRCQKIPKRPGA--DWHDLPDEKVK-------LST 1445
GN + + + S E+ +N + + K GA D L E++K L +
Sbjct: 246 GNSIHSWELGIKGECTSDEIQFMNALIANRRKKHFGAHQDGKKLTIEQIKTFFEHDDLDS 305
Query: 1446 GQVVDLIPWCLPNTAKRHNQWKG-----LFGRLDWEGNFPTSI-TDPQPMGKVGMCFHPD 1499
+ L R N G +F LD + T + +D +G V H +
Sbjct: 306 IMQSLITKGYLQEVNGRFNPVAGNMSFEVFKFLDPDSVSITLVSSDAHKIGVV----HQN 361
Query: 1500 QDRILTVRECARSQGFPDSYQFHGSIQHKHRQIGNAV 1536
+ R +T RECAR QGFPDS+QFH +RQ GN+V
Sbjct: 362 RIRRITPRECARLQGFPDSFQFHPKDSLAYRQFGNSV 398
>sp|P09795|MTS1_SALIN Modification methylase SinI OS=Salmonella infantis GN=sinIM PE=3 SV=1
Length = 461
Score = 95.5 bits (236), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 107/460 (23%), Positives = 174/460 (37%), Gaps = 116/460 (25%)
Query: 1118 ENHLATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVIL 1177
+N L F+G GL G++Q+G T A E ++ A + N P
Sbjct: 72 KNKPKALSFFSGAMGLDLGIEQAGFE-TLLASEIDKAARDTILSNRPN------------ 118
Query: 1178 RAVMEKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQ 1237
M GD D +T + +LA N ++D I GGPPCQ FS + +
Sbjct: 119 ---MALIGDIRDY-TTEDILKLAGVSSGN---------EIDLIMGGPPCQAFSTAGK--R 163
Query: 1238 STWSKVQCEMILAFLSFADYFQPRYFLLENVRNFVSF---------------------NK 1276
+ + + +L A +P+Y ++ENVR +S
Sbjct: 164 LGLEDERGNVFIKYLDVALDIRPKYIVIENVRGLLSAPMKHRPHNERGEGLPPLKSEEQP 223
Query: 1277 GQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPHDTLPEWPEPMHVFAA 1336
G + + GY V F + + FGV Q R+R I + +P + +P H
Sbjct: 224 GGVLHYIIRIIKSAGYSVSFNLYNSANFGVPQIRERVIIICSRDGSRVP-FLQPTH---- 278
Query: 1337 PELKIMLSDNYQYSAVRSTANGAPFRAMTVRDTIGDLPAVGNGASKTIMEYQNDPVSWFQ 1396
S+ +Y G P + +T+R+TI +L + +
Sbjct: 279 -------SEKGEY--------GLP-KWITLRETITNLKNITH------------------ 304
Query: 1397 KRIRGNMAVLTDHISKEMNELNLIRCQKIPKRPGADWHDLPDEKVKLSTGQVVDLIPWCL 1456
+H+ L R K G W LP++ K + G+ L
Sbjct: 305 -----------EHVLFPEKRLKYYRLLK----EGQYWKHLPEDLQKEALGKSFFL----- 344
Query: 1457 PNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFP 1516
G R+ W+ PT +T P M + HPD+ R L+V+E Q FP
Sbjct: 345 ------GGGKTGFLRRVAWDRPSPTLVTHPA-MPATDLA-HPDELRPLSVQEYKVIQQFP 396
Query: 1517 DSYQFHGSIQHKHRQIGNAVPPTLAFALGRKLKEAVESKR 1556
+ + G + K+RQ+GNAVP L A+G+ + + + ++
Sbjct: 397 EEWVIKGKLLDKYRQLGNAVPIGLGLAVGKNILDHMNGRK 436
>sp|P19888|MTBA_BACAR Modification methylase BanI OS=Bacillus aneurinolyticus GN=banIM PE=1
SV=1
Length = 428
Score = 89.7 bits (221), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 179/444 (40%), Gaps = 82/444 (18%)
Query: 1124 LDIFAGCGGLSEGLQQSGI-----SSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILR 1178
+D+FAG GG+ G +++ + + E ++ A E + LN E
Sbjct: 6 VDLFAGIGGIRIGFERAAKRFELETECVLSSEIDKKACETYALNFKE------------- 52
Query: 1179 AVMEKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQS 1238
E GD + S E DF+ G PCQ FS + Q
Sbjct: 53 ---EPQGDIHEITSFPE---------------------FDFLLAGFPCQPFSYAGK--QQ 86
Query: 1239 TWSKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGI 1298
+ + + +P+ FLLENVR V+ +KG+T + ++ L E+GY V + +
Sbjct: 87 GFGDTRGTLFFEVERVLRDNRPKAFLLENVRGLVTHDKGRTLKTIISKLEELGYGVSYLL 146
Query: 1299 LEAGAFGVSQSRKRAF---IWAASPHDTLPEWPEPMHVFAAPELKIMLSDNYQYSAVRST 1355
L + FGV Q+R R + I + P TL +I L D Y+ V+
Sbjct: 147 LNSSTFGVPQNRVRIYILGILGSKPKLTLTSNVGAADSHKYKNEQISLFDE-SYATVKDI 205
Query: 1356 ANGAPFRAMTVRDT-IGDLP-AVGNG----ASKTIMEYQ--NDPVSWFQKRIRGNMAVLT 1407
+P D IG L VGN +++Y+ N SW + +
Sbjct: 206 LEDSPSEKYRCSDEFIGQLSKVVGNNFELLHGYRLIDYRGGNSIHSW-------ELGIKG 258
Query: 1408 DHISKEMNELNLIRCQKIPKRPGA--DWHDLPDEKVK--LSTGQVVDLIPWCLPNTAKR- 1462
D +E+ LN + + K G D L E+++ + Q+ +I L R
Sbjct: 259 DCTKEEIEFLNQLIANRRKKIYGTHQDGKALTLEQIRTFYNHDQLEVIIKSLLQKGYLRE 318
Query: 1463 -HNQWKGLFGRLDWE-GNF--PTSI------TDPQPMGKVGMCFHPDQDRILTVRECARS 1512
N++ + G + +E F P SI +D +G V + R +T RECAR
Sbjct: 319 EENKFNPVCGNMSFEVFKFLDPDSISITLTSSDAHKLGVV----QNNVPRRITPRECARL 374
Query: 1513 QGFPDSYQFHGSIQHKHRQIGNAV 1536
QGFPD + H + ++Q+GN+V
Sbjct: 375 QGFPDDFILHSNDNFAYKQLGNSV 398
>sp|P29567|MTHT_METTF Modification methylase MthTI OS=Methanobacterium thermoformicicum
GN=mthTIM PE=3 SV=1
Length = 330
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 132/344 (38%), Gaps = 79/344 (22%)
Query: 1213 LPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFQPRYFLLENVRNFV 1272
+P V FI GGPPCQ +S + + + A++ P +FL ENV V
Sbjct: 61 IPDVVGFI-GGPPCQSWSLAGSMCGA--DDPRGKTFYAYVDLVKEKDPLFFLAENVPGIV 117
Query: 1273 SFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPHDTLP-EWPEPM 1331
S F+ + S +++GY V + +L A +GV Q RKR FI L E+P+P+
Sbjct: 118 SRTHLPEFKRLVNSFIDIGYNVEYKVLNAKDYGVPQDRKRVFIVGYREDLNLKFEFPKPL 177
Query: 1332 HVFAAPELKIMLSDNYQYSAVRSTANGAPFRAMTVRDTIGDLPAVGNGASKTIMEYQNDP 1391
+ + +T+RD IGDLP K +N
Sbjct: 178 N-----------------------------KKVTLRDAIGDLPEPKPALEKNRSNGENLE 208
Query: 1392 VSWFQKRIRGNMAVLTDHISKEMNELNLIRCQKIPKRPGADWHDLPDEKVKLSTGQVVDL 1451
V N +T S N +R W ++V +
Sbjct: 209 VP--------NHEYMTGTFSSRYMSRNRVRS----------W-----DEVSFTIQAGGRH 245
Query: 1452 IPWCLPNTAKRHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECAR 1511
P C P K F I DP+ P R L+VRECAR
Sbjct: 246 AP-CHPQANKMIKVGPDKF------------IFDPE---------SPKPYRRLSVRECAR 283
Query: 1512 SQGFPDSYQF-HGSIQHKHRQIGNAVPPTLAFALGRKLKEAVES 1554
QGFPD + F + ++ + +GNAVP LA L +K+K+ +E
Sbjct: 284 IQGFPDDFIFYYKNVADGYTMVGNAVPVKLAEELAKKIKKDLEG 327
>sp|P34882|MTAA_SYNP2 Modification methylase AquI subunit alpha OS=Synechococcus sp.
(strain ATCC 27264 / PCC 7002 / PR-6) GN=aquIMA PE=3 SV=1
Length = 248
Score = 75.5 bits (184), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 37/217 (17%)
Query: 1124 LDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAVMEK 1183
+ +F+G GG+ G +G S T A+E + +LN P++ ++ + I V+
Sbjct: 6 ISLFSGAGGMDIGFHAAGFS-TAVAVEQDPSCCNTLRLNMPDTPVIEGDITSITTQVI-- 62
Query: 1184 CGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKV 1243
EAA++ P ++D + GGPPCQ FS + +
Sbjct: 63 ----------LEAAKVN-------------PLEIDLVIGGPPCQSFSLAGK--RMGMDDP 97
Query: 1244 QCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFR--LTLASLL------EMGYQVR 1295
+ ++L FL P+ F++ENV+ ++++KG+ +T AS E Y V
Sbjct: 98 RGMLVLEFLRVVREALPKCFVMENVKGMINWSKGKALEAIMTEASQPIKYAGKEYKYAVS 157
Query: 1296 FGILEAGAFGVSQSRKRAFIWAASPHDTLPEWPEPMH 1332
+ +L A FGV Q R+R FI T ++PEP H
Sbjct: 158 YHVLNAADFGVPQFRERVFIVGNRLGKTF-QFPEPTH 193
>sp|P17044|MTBF_BACIU Modification methylase BsuFI OS=Bacillus subtilis GN=hsdFM PE=3 SV=1
Length = 409
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 38/210 (18%)
Query: 1121 LATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAV 1180
L +D+FAG GG+ G + + ++ E+++ A + ++ N+ E
Sbjct: 101 LTFIDLFAGIGGIRLGFEDK-YTKCVFSSEWDKYAAQTYEANYGE--------------- 144
Query: 1181 MEKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1240
+ GD ++EN I P Q D + G PCQ FS + + + +
Sbjct: 145 -KPHGDI-------------TKINENDI-----PDQ-DVLLAGFPCQPFSNIGK--REGF 182
Query: 1241 SKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1300
+ + +I L QP+ FLLENV+ ++ + G TFR+ L +L +GY V + +++
Sbjct: 183 AHERRNIIFDVLRILKKKQPKMFLLENVKGLLTNDNGNTFRVILDNLKSLGYSVFYEVMD 242
Query: 1301 AGAFGVSQSRKRAFIWAASPHDTLPEWPEP 1330
A FG+ Q R+R I P + ++ P
Sbjct: 243 AQNFGLPQRRERIVIVGFHPDLGINDFSFP 272
>sp|Q59606|MTF7_NEIGO Modification methylase NgoFVII OS=Neisseria gonorrhoeae GN=ngoFVIIM
PE=3 SV=1
Length = 374
Score = 71.2 bits (173), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 92/219 (42%), Gaps = 38/219 (17%)
Query: 1116 SQENHLATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNV 1175
S N L +F+GCGGL G Q+G T WA ++ A E+F+ N
Sbjct: 11 SSSNKPKILSLFSGCGGLDLGFHQAG-CETVWANDFSHWACESFRKN------------- 56
Query: 1176 ILRAVMEKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRF 1235
I ++E GD E + N P D I GG PCQ FS + +
Sbjct: 57 IGDVIVE--GDIEQ-----------------INPNDPTIPDCDIILGGFPCQDFSMI--W 95
Query: 1236 NQSTWSKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVR 1295
Q + + +FL F + +P+ F+ ENV+ ++ NK + + + GY V+
Sbjct: 96 KQPGLEGERGNLYKSFLRFVNAKKPKVFVAENVKGLLTANKKKAIQQIITDFENCGYYVQ 155
Query: 1296 FGILEAGAFGVSQSRKRAFIWAASPHDTLPEW--PEPMH 1332
+ FGV Q R+R I DT ++ PEP H
Sbjct: 156 ANVYNFAEFGVPQFRERVLIVGVR-LDTGFDFRHPEPTH 193
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 30/53 (56%)
Query: 1496 FHPDQDRILTVRECARSQGFPDSYQFHGSIQHKHRQIGNAVPPTLAFALGRKL 1548
+H + R T RE AR Q FPD ++F GS RQIGNAVPP L + +
Sbjct: 285 YHFPEPRAFTNRERARLQSFPDDFEFVGSTTEVRRQIGNAVPPQGVVELAKSI 337
>sp|P50196|MTE8_ECOLX Modification methylase Eco47II OS=Escherichia coli GN=eco47IIM PE=3
SV=1
Length = 417
Score = 70.9 bits (172), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 38/143 (26%)
Query: 1423 QKIPKR---------PGADWHDLPDEKVK--------LSTGQVVDLIPWCLPNTAKRHNQ 1465
QK PKR PG W DLP++ K L G+
Sbjct: 286 QKYPKRKAEILSMVPPGGYWRDLPEDIQKEYMLKSFYLGGGKT----------------- 328
Query: 1466 WKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHGSI 1525
G+ RL W+ P+ P K HP++ R LTVRE AR Q FPD + F G +
Sbjct: 329 --GMARRLSWDE--PSLTLTCAPAQKQTERCHPEETRPLTVREYARIQTFPDEWVFEGPM 384
Query: 1526 QHKHRQIGNAVPPTLAFALGRKL 1548
K++QIGNAVP L+FA+G+ +
Sbjct: 385 SAKYKQIGNAVPVNLSFAVGKSV 407
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 83/201 (41%), Gaps = 36/201 (17%)
Query: 1119 NHLATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILR 1178
N L++FAG GG++ GL+++G+ S E + A + + N PE NV+
Sbjct: 79 NVYTVLELFAGAGGMALGLEKAGLKSVLLN-EIDSHACKTLRKNRPE-------WNVV-- 128
Query: 1179 AVMEKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQS 1238
GD ++ P VD + GG PCQ FS + +
Sbjct: 129 -----EGDVSQ------------------VDFTPYRNTVDVLAGGFPCQAFSYAGK--KL 163
Query: 1239 TWSKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQV-RFG 1297
+ + + F A P+ L ENVR ++ + G+T + ++GY +
Sbjct: 164 GFEDTRGTLFFEFARAAKEINPKVLLAENVRGLLNHDAGRTLETIKNIITDLGYTLFEPR 223
Query: 1298 ILEAGAFGVSQSRKRAFIWAA 1318
+L+A + V Q R+R I A
Sbjct: 224 VLKAIFYKVPQKRERLIIVAV 244
>sp|P16668|MTS3_STAAU Modification methylase Sau3AI OS=Staphylococcus aureus GN=sau3AIM
PE=3 SV=1
Length = 412
Score = 70.9 bits (172), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 48/213 (22%)
Query: 1119 NHLATLDIFAGCGGLSEGLQ--QSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVI 1176
N + +++FAG GG GL+ ++GI WA ++E K+ H
Sbjct: 2 NKIKVVELFAGVGGFRLGLENTKNGIFDITWANQWEPSR----KIQH------------- 44
Query: 1177 LRAVMEKCGDAEDCVS------TSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFS 1230
A DC S ++A DE + N + D I GG PCQ +S
Sbjct: 45 ----------AFDCYSKRFKNGIHSNKDIAQVSDEEMANT-----EADMIVGGFPCQDYS 89
Query: 1231 GMNRFNQSTWSKVQCEMILAFLSFADYFQ---PRYFLLENVRNFV---SFNKGQTFRLTL 1284
N +Q + + F Y Q P+Y LLENV + S +G+ F + L
Sbjct: 90 VARSLNGEL--GIQGKKGVLFWQIIRYIQNTFPKYLLLENVDRLLKSPSSQRGRDFAVML 147
Query: 1285 ASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWA 1317
++L E+GY V + ++ A +G +Q R+R FI+
Sbjct: 148 STLNELGYNVEWRVINAADYGNAQRRRRVFIFG 180
>sp|P24581|MTNX_NEILA Cytosine-specific methyltransferase NlaX OS=Neisseria lactamica
GN=nlaXM PE=3 SV=1
Length = 313
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 113/253 (44%), Gaps = 53/253 (20%)
Query: 1124 LDIFAGCGGLSEGLQQS-GISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAVME 1182
+D+FAG GG+ G +Q+ ++ E ++ A + ++ NH +
Sbjct: 5 IDLFAGIGGIRLGFEQAFDDVRCVFSSEIDKYAVQTYQANHGGETV-------------- 50
Query: 1183 KCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFS--GMNRFNQSTW 1240
CGD ++ ++ A++ D ++ G PCQ FS G+ + T
Sbjct: 51 -CGD----ITQTDVADIPDH---------------DILSAGFPCQPFSQAGLKKGFADTR 90
Query: 1241 SKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1300
+ ++ L+ +P+ FLLENV+ +KG+T ++ LA L + GY+V +L+
Sbjct: 91 GTLFFDIERILLA----KKPQAFLLENVKQLKGHDKGRTLQVILAHLQQAGYKVYTEVLK 146
Query: 1301 AGAFGVSQSRKRAFIWAASPHDTLPEWPEPMH--------VFAAPELKIMLSD----NYQ 1348
A FG+ Q+R+R ++ HD +P+P+ + A P+ K +SD YQ
Sbjct: 147 ARDFGIPQNRERIYLVGFLNHDVDFRFPQPIGQATAVGDILEAYPDEKYTISDKLWQGYQ 206
Query: 1349 YSAVRSTANGAPF 1361
+ A G F
Sbjct: 207 RRKAENRAAGKGF 219
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 1502 RILTVRECARSQGFPDSYQFHGSIQHKHRQIGNAVPPTLAFALGRKLKEAVES 1554
R +T E AR QGFPDS+Q S +RQ GN+V + A+ ++K A+ +
Sbjct: 255 RKITPPEAARLQGFPDSFQIPVSDAQAYRQFGNSVCVPVIRAIAEQMKAALSA 307
>sp|P06530|MTBR_BACIU Modification methylase BsuRI OS=Bacillus subtilis GN=hsdRM PE=3 SV=1
Length = 436
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 126/306 (41%), Gaps = 48/306 (15%)
Query: 1099 KCIEGEDELEVEKQGGASQENHLATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEA 1158
+ I +D+LE+ ++ + + + L +F+GCGGL G + +G++ A+ E+ A EA
Sbjct: 38 RIINSDDDLEIIEKVDF-RTDKINVLSLFSGCGGLDLGFELAGLA----AVIGEQAAMEA 92
Query: 1159 FKLNHPESLMLINNCNVILRAVMEKC-GDAEDCVSTSEAAELAASLDENVINNLPLPGQV 1217
FK + + N ++ +A T+ + E I + +
Sbjct: 93 FK--DKDRFNELRNKSIFHTIYTNDLFKEANQTYKTNFPGHVIQH--EKDIRQVKYFPKC 148
Query: 1218 DFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYF---QPRYFLLENVRNFVSF 1274
+ I GG PC GFS ++ + + +L F QP F+ ENV+ ++
Sbjct: 149 NLILGGFPCPGFS------EAGPRLIDDDRNFLYLHFIRSLIQAQPEIFVAENVKGMMTL 202
Query: 1275 NKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPHDTLPEWPEPMHVF 1334
KG+ + GY+V+F +L A +GV Q R+R I
Sbjct: 203 GKGEVLNQIIEDFASAGYRVQFKLLNARDYGVPQLRERVIIEGVRKD------------- 249
Query: 1335 AAPELKIMLSDNYQY-SAVRSTANG-APFRAMTVRDTIGDLPA----VGNGASKTIMEYQ 1388
+S NY+Y S G PF+ T+RD+IGDL G+ +I +
Sbjct: 250 --------ISFNYKYPSPTHGEETGLKPFK--TLRDSIGDLVTDPGPYFTGSYSSIYMSR 299
Query: 1389 NDPVSW 1394
N SW
Sbjct: 300 NRKKSW 305
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 10/54 (18%)
Query: 1502 RILTVRECARSQGFPDSYQF----------HGSIQHKHRQIGNAVPPTLAFALG 1545
R L+V+E AR Q FPD +QF + + +++QIGNAVP LA A+
Sbjct: 346 RRLSVKEIARVQTFPDWFQFSQGTNSQTSINNRLDKQYKQIGNAVPVLLAKAVA 399
>sp|Q59603|MTB1_NEIGO Modification methylase NgoBI OS=Neisseria gonorrhoeae GN=ngoBIM PE=3
SV=2
Length = 317
Score = 68.2 bits (165), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 97/213 (45%), Gaps = 41/213 (19%)
Query: 1123 TLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAVME 1182
T+D+F+G GG+ G ++ G ++ ++ E+++ A + ++ N E +
Sbjct: 4 TIDLFSGIGGIRLGFEKYGCTNV-FSSEWDKYARQVYEANFGE----------------K 46
Query: 1183 KCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSK 1242
GD N I+ +P D + G PCQ FS + +
Sbjct: 47 PFGDI------------------NGIDPSDIPDH-DILLAGFPCQPFSIAGK--GLGFED 85
Query: 1243 VQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAG 1302
+ + QP+ FLLENV+ + + G+TFR+ L +L ++GY V F +L
Sbjct: 86 TRGTLFFNIAEILKTKQPKAFLLENVKRLTTHDSGRTFRIVLETLKQLGYTVYFKVLNTL 145
Query: 1303 AFGVSQSRKRAFIWAASPHDTLPEW-PEPMHVF 1334
FG+ Q R+R +I S D +P + PEP++ +
Sbjct: 146 DFGLPQKRERIYIVGFS--DNIPFYFPEPINQY 176
>sp|P34877|MTSA_LACLC Modification methylase ScrFIA OS=Lactococcus lactis subsp. cremoris
GN=scrFIAM PE=3 SV=1
Length = 389
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 37/192 (19%)
Query: 1124 LDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAVMEK 1183
+D+FAG GG G Q+ + ++ E ++ A + +K N + E
Sbjct: 82 IDLFAGIGGTRLGFHQTEKVKSVFSSEIDKFAIKTYKANFGD----------------EP 125
Query: 1184 CGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKV 1243
GD +DE I P D + GG PCQ FS + + +
Sbjct: 126 HGDI-------------TKIDEKDI-----PDH-DILVGGFPCQAFSQAGK--KLGFDDT 164
Query: 1244 QCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGA 1303
+ + +P+ FLLENV+N + +KG+TF+ L +L E+ Y+V + +A
Sbjct: 165 RGTLFFEIARIIKEKRPKAFLLENVKNLKTHDKGRTFKTILNTLEELDYEVHTALFKARD 224
Query: 1304 FGVSQSRKRAFI 1315
FG+ Q+R+R +I
Sbjct: 225 FGLPQNRERIYI 236
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 1502 RILTVRECARSQGFPDSYQFHGSIQHKHRQIGNAVPPTLAFALGRKLKEAVESKR 1556
R +T RE AR QGFP+++ S +++ GN+V A+ K+ E +E +
Sbjct: 334 RKITPREAARLQGFPENFIIPVSDTQAYKEFGNSVAVPTIHAIAEKMLEVLEKSK 388
>sp|P43420|MTB6_BACSF Modification methylase Bsp6I OS=Bacillus sp. (strain RFL6) GN=bsp6IM
PE=3 SV=1
Length = 315
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 83/196 (42%), Gaps = 36/196 (18%)
Query: 1121 LATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAV 1180
L +FAG GG+ G +Q+G T WA EY++ A ++ N L++ + N+
Sbjct: 2 LQIASLFAGVGGIDLGFEQTGYFETVWANEYDKNAAITYQSNFKNKLIIDDIRNI----- 56
Query: 1181 MEKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1240
K D D D + G PC FS + + +
Sbjct: 57 --KVEDVPD---------------------------FDVLLSGFPCTSFS-VAGYRKGFE 86
Query: 1241 SKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1300
+ ++ L +P+ LENV+N V + G TF++ +L GY +++ +L
Sbjct: 87 DEKSGDLFFETLRLIVAKKPQVIFLENVKNLVGHDNGNTFKVIYEALESNGYHIKYQVLN 146
Query: 1301 AGAFG-VSQSRKRAFI 1315
A FG + Q+R+R +I
Sbjct: 147 AKDFGNIPQNRERIYI 162
>sp|O33481|MTP1_PSYTA Modification methylase PspPI OS=Psychrobacter sp. (strain TA137)
GN=pspPIM PE=3 SV=1
Length = 416
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 1468 GLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHGSIQH 1527
G+ RL W+ T + P + C HP + R LT RE AR Q FPD ++F GS+
Sbjct: 325 GMARRLSWDEPSLTLVCTPA-QKQTERC-HPSESRPLTTREYARIQTFPDDWEFKGSVGQ 382
Query: 1528 KHRQIGNAVPPTLAFALGRKL 1548
++QIGNAVP LA A+G+ +
Sbjct: 383 IYKQIGNAVPVNLALAIGKAI 403
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
Query: 1213 LPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFQPRYFLLENVRNFV 1272
L G+VD + GG PCQ FS + Q + ++ ++ +P+ FL ENV+
Sbjct: 136 LNGKVDLLTGGFPCQPFSYAGK--QLGFEDLRGTLVFEMARAIKEIKPKVFLAENVKGLA 193
Query: 1273 SFNKGQTFRLTLASLLEMGYQV-RFGILEAGAFGVSQSRKRAFI 1315
+ G+T + + L ++GY++ + +A + V Q R+R I
Sbjct: 194 ENDGGRTLSIIIKVLEDLGYKILEKEVYKAIFYKVPQKRERLII 237
>sp|P08455|MTP2_NEIGO Modification methylase NgoPII OS=Neisseria gonorrhoeae GN=ngoPIIM
PE=3 SV=2
Length = 330
Score = 65.9 bits (159), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 82/194 (42%), Gaps = 35/194 (18%)
Query: 1121 LATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAV 1180
+ + +F+GCGGL G +++G A EY++ FK NHP++ ++ + +R +
Sbjct: 1 MKIISLFSGCGGLDLGFEKAGFEIPA-ANEYDKTIWATFKANHPKTHLIEGD----IRKI 55
Query: 1181 MEKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1240
E ED P ++D I GGPPCQ +S
Sbjct: 56 KE-----ED-----------------------FPEEIDGIIGGPPCQSWSEAGALRGIDD 87
Query: 1241 SKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1300
++ Q + ++ QP++FL ENV ++ + L GY V +
Sbjct: 88 ARGQ--LFFDYIRILKSKQPKFFLAENVSGMLANRHNGAVQNLLKMFDGCGYDVTLTMAN 145
Query: 1301 AGAFGVSQSRKRAF 1314
A +GV+Q RKR F
Sbjct: 146 AKDYGVAQERKRVF 159
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 1502 RILTVRECARSQGFPDSYQF-HGSIQHKHRQIGNAVPPTLAFALGRKLKEAVE 1553
R +TVRE AR QGFPD+++F + ++ ++ IGNAVP LA+ + +K+ +E
Sbjct: 277 RRMTVREVARIQGFPDNFKFIYQNVNDAYKMIGNAVPVNLAYEIAAAIKKTLE 329
>sp|P13906|MTB1_LYSSH Modification methylase BspRI OS=Lysinibacillus sphaericus GN=bspRIM
PE=1 SV=3
Length = 424
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 99/456 (21%), Positives = 153/456 (33%), Gaps = 140/456 (30%)
Query: 1123 TLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFK-------LNHPESLMLINNCNV 1175
L +F G GGL G + +G+ + + A EAFK + H + ++
Sbjct: 60 VLSLFCGAGGLDLGFELAGLEQSLGT----DKALEAFKDRDVYNAIRHESVFHTVYANDI 115
Query: 1176 ILRAVMEKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRF 1235
A+ + + V E D I P + + GG PC GFS
Sbjct: 116 FSEALQTYEKNMPNHVFIHEK-------DIRKIKEFP---SANLVIGGFPCPGFS----- 160
Query: 1236 NQSTWSKVQCEMILAFLSFADYF---QPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGY 1292
++ V E ++ F QP F+ ENV+ ++ G+ FR + GY
Sbjct: 161 -EAGPRLVDDERNFLYIHFIRCLMQVQPEIFVAENVKGMMTLGGGEVFRQIVEDFGAAGY 219
Query: 1293 QVRFGILEAGAFGVSQSRKRAFIWAASPHDTLPEWPEPMHVFAAPELKIMLSDNYQYSAV 1352
+V +L A +GV Q R+R I ++ + NY+Y +
Sbjct: 220 RVEARLLNARDYGVPQIRERVIIVG---------------------VRNDIDFNYEYPEI 258
Query: 1353 RSTANGAPFRAMTVRDTIGDLP----AVGNGASKTIMEYQNDPVSW----FQKRIRGNMA 1404
+T+ + IGDL G+ TI +N W F + G A
Sbjct: 259 THGNEEGLKPYVTLEEAIGDLSLDPGPYFTGSYSTIFMSRNRKKKWTDQSFTIQASGRQA 318
Query: 1405 VLTDHISKEMNELNLIRCQKIPKRPGADWHDLPDEKVKLSTGQVVDLIPWCLPNTAKRHN 1464
P PG LP EK VD W P+ + H
Sbjct: 319 ---------------------PIHPGG----LPMEK--------VDKNKWIFPDGEENH- 344
Query: 1465 QWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRILTVRECARSQGFPDSYQF--- 1521
R L+V+E R Q FPD Y+F
Sbjct: 345 -------------------------------------RRLSVKEIKRIQTFPDWYEFSDG 367
Query: 1522 -------HGSIQHKHRQIGNAVPPTLAFALGRKLKE 1550
+ + +++QIGNAVP LA A+ + + +
Sbjct: 368 GNMKVSVNNRLDKQYKQIGNAVPVFLARAVAKSIAQ 403
>sp|P09915|MTBR_BPRH1 Modification methylase Rho11sI OS=Bacillus phage rho11s PE=3 SV=2
Length = 503
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 1204 DENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFQPRYF 1263
D + I+ LP + D + GG PCQ FS + + + + ++ QPRYF
Sbjct: 57 DVSKIDKKKLP-EFDLLVGGSPCQSFSVAGY--RKGFEDTRGTLFFQYIDTLKEKQPRYF 113
Query: 1264 LLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFI 1315
+ ENV+ ++ +KG T + S E+GY++ +L + F V Q+R+R +I
Sbjct: 114 VFENVKGLINHDKGNTLNIMAESFSEVGYRIDLELLNSKFFNVPQNRERIYI 165
>sp|O34939|YDIO_BACSU Probable BsuMI modification methylase subunit YdiO OS=Bacillus
subtilis (strain 168) GN=ydiO PE=2 SV=1
Length = 427
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 90/201 (44%), Gaps = 30/201 (14%)
Query: 1125 DIFAGCGGLSEGLQQS----GISST-KWAIEYEEPAGEAFKLNHPESLMLINNCNVILRA 1179
D+F+GCGGLS G+ ++ GI+ +A + E A ++ N L
Sbjct: 88 DLFSGCGGLSLGVWEACRALGINPRFSFACDLNEAALSVYEKNFSPDFSL---------- 137
Query: 1180 VMEKCGDAEDCVSTSEAAELAASL--DENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQ 1237
+ + EL A L +E I + ++DFI GPPCQG S +N N
Sbjct: 138 --------NESIEKHINGELGAPLTVEEQRIKDKV--KKIDFILAGPPCQGHSDLN--NH 185
Query: 1238 STWSKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFG 1297
+ + +++ + FQP L+ENV + +K +F+ L GY
Sbjct: 186 TRRKDPRNALLMRVSRVIELFQPSSVLVENVPGIIH-DKSGSFKEFKNHLKTQGYYFDEI 244
Query: 1298 ILEAGAFGVSQSRKRAFIWAA 1318
+L A GVSQ+R+R FI+A+
Sbjct: 245 VLNAEKLGVSQARRRYFIFAS 265
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 10/98 (10%)
Query: 1456 LPNTAK------RHNQWKGLFGRLDWEGNFPTSITDPQPMGKVGMCFHPDQDRILTVREC 1509
LPN+ + + + +K ++GR+ W+ PT G+ G H R +T E
Sbjct: 327 LPNSERPDCHRLKPHSYKSVYGRMYWDRPAPTITRGFGSTGQ-GRFVHSLLKRTITPHEA 385
Query: 1510 ARSQGFPDSYQFHGSIQHKHRQ--IGNAVPPTLAFALG 1545
AR Q FPD + F G ++ + Q IGNAVP L++ L
Sbjct: 386 ARIQFFPDFFNF-GDLRRRQYQDVIGNAVPSKLSYLLA 422
>sp|P45000|MTH5_HAEIN Modification methylase HindV OS=Haemophilus influenzae (strain ATCC
51907 / DSM 11121 / KW20 / Rd) GN=hindVM PE=3 SV=1
Length = 304
Score = 64.3 bits (155), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 98/252 (38%), Gaps = 62/252 (24%)
Query: 1121 LATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAV 1180
+ +D+F+GCGGLS G + +G A E E A E +K N + N+ LR
Sbjct: 1 MKCVDLFSGCGGLSLGFELAGFEICA-AFENWEKAIEIYKNNFSHPIY-----NIDLR-- 52
Query: 1181 MEKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1240
+ EA E D I GGPPCQ FS + + S
Sbjct: 53 -----------NEKEAVEKIKKYSP------------DLIMGGPPCQDFSSAGKRDISLG 89
Query: 1241 SKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1300
+ ++ +F + +P++F++ENV K + + ++ GY + IL+
Sbjct: 90 ---RADLTYSFANIVCNIRPKWFVMENVE---QIKKSHILQDIINQFIDFGYGLTSAILD 143
Query: 1301 AGAFGVSQSRKRAFIWAASPHDTLPEWPEPMHVFAAPELKIMLSDNYQYSAVRSTANGAP 1360
A GV QSR R + + H F P L LSD
Sbjct: 144 ASYCGVPQSRTRFSLIGKLNSE---------HNFLIPTLSRKLSD--------------- 179
Query: 1361 FRAMTVRDTIGD 1372
+ MTVRD +G+
Sbjct: 180 -KPMTVRDYLGN 190
>sp|P34879|MTS2_SHISO Modification methylase SsoII OS=Shigella sonnei GN=ssoIIM PE=3 SV=1
Length = 379
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 81/192 (42%), Gaps = 37/192 (19%)
Query: 1124 LDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAVMEK 1183
+D+FAG GG G Q+ + ++ E+++ A + + N+
Sbjct: 75 IDLFAGIGGTRLGFHQTNAVNVVFSSEWDKFAQKTYHANY-------------------- 114
Query: 1184 CGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTWSKV 1243
GD D D I+ +P + + GG PC FS + ++
Sbjct: 115 -GDFPDG-------------DITKIDEKDIPDH-EILVGGFPCVAFSQAGL--KKGFNDT 157
Query: 1244 QCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILEAGA 1303
+ + +P FLLENV+N + +KG+TF + +L E+ Y V + I A
Sbjct: 158 RGTLFFDIARIIKEKKPHAFLLENVKNLLGHDKGRTFSIIKNTLEELNYTVYYNIFAAKD 217
Query: 1304 FGVSQSRKRAFI 1315
FGV Q+R+R +I
Sbjct: 218 FGVPQNRERIYI 229
>sp|P25282|MTG1_HAEGA Modification methylase HgaIA OS=Haemophilus gallinarum GN=hgaIAM PE=3
SV=2
Length = 357
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 10/151 (6%)
Query: 1175 VILRAVMEKCGDAEDCVSTSEAAELAASLDENVIN---NLPLPGQVDFINGGPPCQGFS- 1230
++ +++K D + + + D+ + N N+ L QVDF+ PPCQG S
Sbjct: 29 IVANELIKKRADLYQKIYPNHKMVIGDIRDQRIFNKVLNIALTNQVDFLIASPPCQGMSV 88
Query: 1231 -GMNRFNQSTWSKVQCEMILAFLSFADYFQPRYFLLENVRNFVSF-----NKGQTFRLTL 1284
G NR + + + +I+ ++ +P Y L+ENV + NK + L
Sbjct: 89 AGKNRDVSNMANDNRNYLIMYVIAMIKKLKPAYILIENVPFLLKLELYIDNKLTPIKNIL 148
Query: 1285 ASLLEMGYQVRFGILEAGAFGVSQSRKRAFI 1315
Y + F IL+A +G Q RKRA I
Sbjct: 149 EDEFGSEYHIHFDILDAADYGTPQRRKRAII 179
>sp|P0AED9|DCM_ECOLI DNA-cytosine methyltransferase OS=Escherichia coli (strain K12)
GN=dcm PE=1 SV=1
Length = 472
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 1124 LDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAVMEK 1183
+D+FAG GG+ G + G + E+ + A +K NH C+ E
Sbjct: 90 IDLFAGIGGIRRGFESIG-GQCVFTSEWNKHAVRTYKANH--------YCDPATHHFNED 140
Query: 1184 CGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFS--GMNRFN----- 1236
D + E AA E++ ++P + D + G PCQ FS G+++ N
Sbjct: 141 IRDITLSHKEGVSDEAAA---EHIRQHIP---EHDVLLAGFPCQPFSLAGVSKKNSLGRA 194
Query: 1237 QSTWSKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQV 1294
Q + + D +P F+LENV+N S ++G+TFR+ + +L E+GY V
Sbjct: 195 HGFACDTQGTLFFDVVRIIDARRPAMFVLENVKNLKSHDQGKTFRIIMQTLDELGYDV 252
>sp|P0AEE0|DCM_ECO57 DNA-cytosine methyltransferase OS=Escherichia coli O157:H7 GN=dcm
PE=3 SV=1
Length = 472
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 1124 LDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAVMEK 1183
+D+FAG GG+ G + G + E+ + A +K NH C+ E
Sbjct: 90 IDLFAGIGGIRRGFESIG-GQCVFTSEWNKHAVRTYKANH--------YCDPATHHFNED 140
Query: 1184 CGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFS--GMNRFN----- 1236
D + E AA E++ ++P + D + G PCQ FS G+++ N
Sbjct: 141 IRDITLSHKEGVSDEAAA---EHIRQHIP---EHDVLLAGFPCQPFSLAGVSKKNSLGRA 194
Query: 1237 QSTWSKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQV 1294
Q + + D +P F+LENV+N S ++G+TFR+ + +L E+GY V
Sbjct: 195 HGFACDTQGTLFFDVVRIIDARRPAMFVLENVKNLKSHDQGKTFRIIMQTLDELGYDV 252
>sp|Q58600|MT52_METJA Probable modification methylase MJ1200 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1200 PE=3 SV=1
Length = 366
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 97/250 (38%), Gaps = 47/250 (18%)
Query: 1121 LATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLN---------HPESLMLIN 1171
L +D+F GCGG S G + G AIE E A ++ LN P L
Sbjct: 5 LKFIDLFCGCGGFSRGFVEEGFEPL-VAIELNEDAAFSYALNFNGQIYEKIRPGEFKLKE 63
Query: 1172 NCNVI-------------------LRAVMEKCGDAEDCVSTSEAAELAASLDENVINNLP 1212
+ L + EK V + E+ A E I N
Sbjct: 64 LKGYVGIYPFKFPFEEEDIKWLKRLGTLNEKTKKLSPVVINDDIREIHAIEIEKFIKN-- 121
Query: 1213 LPGQVDFINGGPPCQGFSGMN-RFNQSTWSKV----QCEMILAFLSFADYFQPRYFLLEN 1267
+VD I GGPPC+G++G N + ++ + ++ ++L ++ QP+ F++EN
Sbjct: 122 --KKVDVIIGGPPCEGYTGANPKREKNPYDRLYKDETGRLVLEYIRIVGDLQPKIFVMEN 179
Query: 1268 VRNFVSFNKGQTFRLTLASLLEMGYQ-VRFGILEAGAFGVSQSRKRAFIWAASPHDTLPE 1326
V + E+GY+ V F L A +G R+R F+ S + PE
Sbjct: 180 VPGIKEVRGA-----IIKEFREIGYEDVYFNTLRAEDYGNPSVRRRVFV---SNIEINPE 231
Query: 1327 WPEPMHVFAA 1336
+P V A
Sbjct: 232 KTQPKTVIEA 241
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 1489 MGKVGMCFHPDQDRILTVRECARSQGFPDSYQFHGSIQHKHRQIGNAVPPTLAFALGRKL 1548
MGK HP +DR+LT RE AR +PD + F G I+ + QIG +VP L+ A+ R +
Sbjct: 303 MGK-RFFIHPYEDRLLTPREQARLMSYPDYHLFAGGIRSCYNQIGESVPVALSRAIARVI 361
Query: 1549 KEAVE 1553
KE ++
Sbjct: 362 KENLK 366
>sp|P11408|MTM1_MORSP Modification methylase MspI OS=Moraxella sp. GN=mspIM PE=3 SV=1
Length = 418
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 1216 QVDFINGGPPCQGFSGMNRFNQSTWSKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFN 1275
Q D + G PCQ FS + + + Q M + + + LENV ++ +
Sbjct: 164 QHDILCAGFPCQPFSHIGK-REGFEHPTQGTMFHEIVRIIETKKTPVLFLENVPGLINHD 222
Query: 1276 KGQTFRLTLASLLEMGYQVRFGILEAGAFGVSQSRKRAFIWAASPHDTLPEWPEP 1330
G T ++ + +L +MGY+V +L+A FG+ Q RKR ++ A + E+P+P
Sbjct: 223 DGNTLKVIIETLEDMGYKVHHTVLDASHFGIPQKRKRFYLVAFLNQNIHFEFPKP 277
>sp|P34906|MTF1_FUSNU Modification methylase FnuDI OS=Fusobacterium nucleatum GN=fnuDIM
PE=3 SV=1
Length = 344
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 79/194 (40%), Gaps = 37/194 (19%)
Query: 1121 LATLDIFAGCGGLSEGLQQSGISSTKWAIEYEEPAGEAFKLNHPESLMLINNCNVILRAV 1180
+ L +F+G GGL G +++G A EY++ E ++ NH L
Sbjct: 1 MKLLSLFSGAGGLDLGFERAGFEIIV-ANEYDKTIWETYEKNHKAKL------------- 46
Query: 1181 MEKCGDAEDCVSTSEAAELAASLDENVINNLPLPGQVDFINGGPPCQGFSGMNRFNQSTW 1240
+ + E + LP + D I GGPPCQ +S
Sbjct: 47 ------------------IKKDIREILSEELP---KSDGIIGGPPCQSWSEAGSLR--GI 83
Query: 1241 SKVQCEMILAFLSFADYFQPRYFLLENVRNFVSFNKGQTFRLTLASLLEMGYQVRFGILE 1300
+ + ++ ++ QP++FL ENV+ +S + + + E GY V +L
Sbjct: 84 NDPRGKLFYEYIRILKDIQPKFFLAENVKGMLSKRNTEAVKDIIKEFEEAGYNVFIKLLN 143
Query: 1301 AGAFGVSQSRKRAF 1314
A +GV+Q R+R F
Sbjct: 144 AFDYGVAQDRERVF 157
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 1502 RILTVRECARSQGFPDSYQF-HGSIQHKHRQIGNAVPPTLAFALGRKLKEAVESK 1555
R L++RECAR QGFPD+++F + S++ ++ +GNAVP LA+ + +++KE + K
Sbjct: 276 RRLSIRECARIQGFPDTFKFYYTSLEDGYKMVGNAVPVDLAYIIAKRIKETLTDK 330
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.133 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 599,267,725
Number of Sequences: 539616
Number of extensions: 27034306
Number of successful extensions: 110204
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 180
Number of HSP's that attempted gapping in prelim test: 104235
Number of HSP's gapped (non-prelim): 4319
length of query: 1558
length of database: 191,569,459
effective HSP length: 131
effective length of query: 1427
effective length of database: 120,879,763
effective search space: 172495421801
effective search space used: 172495421801
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)