Query 000410
Match_columns 1553
No_of_seqs 885 out of 4340
Neff 8.2
Searched_HMMs 46136
Date Fri Mar 29 07:38:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000410.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000410hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1240 Protein kinase contain 100.0 5E-220 1E-224 1973.5 74.0 1405 1-1553 1-1431(1431)
2 PLN00181 protein SPA1-RELATED; 100.0 7.8E-43 1.7E-47 464.1 55.5 308 1134-1553 478-791 (793)
3 KOG0615 Serine/threonine prote 100.0 7.2E-46 1.6E-50 414.5 17.1 252 26-292 173-437 (475)
4 KOG0575 Polo-like serine/threo 100.0 3.9E-43 8.4E-48 412.9 24.2 249 25-292 18-269 (592)
5 KOG0581 Mitogen-activated prot 100.0 6.6E-42 1.4E-46 382.4 21.6 244 26-292 80-335 (364)
6 KOG0592 3-phosphoinositide-dep 100.0 4.9E-42 1.1E-46 395.9 19.3 258 23-292 71-338 (604)
7 KOG0598 Ribosomal protein S6 k 100.0 1.4E-41 3.1E-46 379.9 21.1 248 26-292 26-281 (357)
8 KOG0595 Serine/threonine-prote 100.0 4.3E-41 9.2E-46 377.9 22.1 247 25-292 10-268 (429)
9 KOG0593 Predicted protein kina 100.0 2.2E-42 4.8E-47 371.5 11.3 255 26-307 3-292 (396)
10 KOG0591 NIMA (never in mitosis 100.0 1.3E-41 2.7E-46 362.2 6.9 250 24-295 18-284 (375)
11 KOG0588 Serine/threonine prote 100.0 2.8E-40 6E-45 388.0 18.5 244 26-292 13-263 (786)
12 KOG0661 MAPK related serine/th 100.0 5E-41 1.1E-45 382.0 11.1 245 26-292 11-291 (538)
13 KOG0597 Serine-threonine prote 100.0 4.3E-40 9.3E-45 377.7 15.5 247 26-292 3-251 (808)
14 KOG0600 Cdc2-related protein k 100.0 7.5E-40 1.6E-44 375.1 17.4 249 26-292 118-400 (560)
15 KOG0659 Cdk activating kinase 100.0 2.8E-39 6.1E-44 343.1 18.1 248 26-292 3-281 (318)
16 KOG0583 Serine/threonine prote 100.0 7.8E-39 1.7E-43 382.4 24.2 251 26-292 18-275 (370)
17 KOG0611 Predicted serine/threo 100.0 7.1E-40 1.5E-44 361.6 14.0 253 23-295 51-306 (668)
18 KOG0605 NDR and related serine 100.0 1.2E-38 2.7E-43 368.9 21.7 254 26-292 142-445 (550)
19 KOG0616 cAMP-dependent protein 100.0 7.4E-39 1.6E-43 344.6 18.4 245 26-292 45-297 (355)
20 KOG0582 Ste20-like serine/thre 100.0 1.7E-37 3.7E-42 350.6 25.9 253 25-292 26-293 (516)
21 KOG0660 Mitogen-activated prot 100.0 2.6E-38 5.6E-43 352.1 16.5 250 26-292 23-310 (359)
22 KOG0599 Phosphorylase kinase g 100.0 1.5E-38 3.4E-43 336.1 13.7 254 26-292 18-283 (411)
23 KOG0585 Ca2+/calmodulin-depend 100.0 4E-38 8.7E-43 357.2 17.9 261 26-294 98-374 (576)
24 KOG0198 MEKK and related serin 100.0 1.5E-37 3.2E-42 356.0 19.0 251 25-293 17-277 (313)
25 KOG0663 Protein kinase PITSLRE 100.0 1.4E-37 3E-42 339.1 16.4 248 26-292 77-361 (419)
26 KOG4717 Serine/threonine prote 100.0 1.8E-37 3.8E-42 351.3 17.5 245 26-294 19-272 (864)
27 KOG0192 Tyrosine kinase specif 100.0 1.3E-36 2.8E-41 359.6 23.9 251 26-294 42-301 (362)
28 KOG0658 Glycogen synthase kina 100.0 5.3E-37 1.1E-41 342.3 17.6 241 26-292 25-306 (364)
29 KOG0580 Serine/threonine prote 100.0 1.1E-37 2.5E-42 326.6 11.2 248 26-294 23-275 (281)
30 KOG0694 Serine/threonine prote 100.0 1.7E-36 3.7E-41 360.4 21.6 247 26-292 369-624 (694)
31 KOG0271 Notchless-like WD40 re 100.0 1.2E-35 2.5E-40 325.5 24.6 339 1127-1553 103-479 (480)
32 cd05612 STKc_PRKX_like Catalyt 100.0 3.5E-36 7.6E-41 354.6 22.0 245 26-292 2-254 (291)
33 PTZ00263 protein kinase A cata 100.0 6.3E-36 1.4E-40 358.7 23.3 245 26-292 19-271 (329)
34 KOG0033 Ca2+/calmodulin-depend 100.0 6.8E-38 1.5E-42 327.0 5.0 245 26-292 12-267 (355)
35 KOG0594 Protein kinase PCTAIRE 100.0 2.1E-36 4.7E-41 339.1 17.0 248 26-292 12-302 (323)
36 cd05571 STKc_PKB Catalytic dom 100.0 1E-35 2.2E-40 356.1 22.3 243 31-292 1-251 (323)
37 PTZ00426 cAMP-dependent protei 100.0 2E-35 4.4E-40 355.2 23.5 245 26-292 31-284 (340)
38 cd07871 STKc_PCTAIRE3 Catalyti 100.0 3.4E-35 7.3E-40 345.7 24.7 247 26-292 6-285 (288)
39 KOG0201 Serine/threonine prote 100.0 9.3E-37 2E-41 345.3 10.4 247 25-292 13-263 (467)
40 KOG0667 Dual-specificity tyros 100.0 1.6E-35 3.6E-40 353.3 20.9 242 25-292 186-502 (586)
41 KOG0578 p21-activated serine/t 100.0 5.7E-36 1.2E-40 350.0 16.6 244 26-292 274-523 (550)
42 cd05585 STKc_YPK1_like Catalyt 100.0 5.8E-35 1.3E-39 347.8 23.1 241 33-292 1-247 (312)
43 cd05593 STKc_PKB_gamma Catalyt 100.0 7.4E-35 1.6E-39 349.2 23.9 243 31-292 1-251 (328)
44 KOG0596 Dual specificity; seri 100.0 2.9E-35 6.2E-40 339.2 18.5 259 25-292 361-627 (677)
45 KOG0272 U4/U6 small nuclear ri 100.0 1.3E-34 2.7E-39 322.4 22.9 287 1132-1553 168-458 (459)
46 cd07869 STKc_PFTAIRE1 Catalyti 100.0 1.4E-34 3E-39 343.2 24.9 248 25-292 5-288 (303)
47 cd05595 STKc_PKB_beta Catalyti 100.0 9.8E-35 2.1E-39 347.4 23.2 243 31-292 1-251 (323)
48 cd05614 STKc_MSK2_N N-terminal 100.0 1.2E-34 2.5E-39 348.4 24.0 251 26-292 1-267 (332)
49 KOG0032 Ca2+/calmodulin-depend 100.0 1.8E-34 4E-39 344.2 25.2 247 26-293 36-294 (382)
50 KOG1989 ARK protein kinase fam 100.0 3.1E-35 6.7E-40 361.8 18.9 257 24-294 36-309 (738)
51 cd05584 STKc_p70S6K Catalytic 100.0 8.3E-35 1.8E-39 348.2 22.2 244 31-292 2-256 (323)
52 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.5E-34 3.2E-39 348.5 24.4 251 26-292 1-290 (338)
53 KOG2345 Serine/threonine prote 100.0 9.5E-36 2.1E-40 313.2 12.1 257 24-294 20-298 (302)
54 KOG0193 Serine/threonine prote 100.0 3E-35 6.4E-40 343.7 17.4 260 17-294 385-651 (678)
55 KOG0586 Serine/threonine prote 100.0 4.7E-35 1E-39 345.1 19.2 278 22-322 53-334 (596)
56 KOG0589 Serine/threonine prote 100.0 1.5E-35 3.2E-40 346.6 14.5 247 26-292 5-258 (426)
57 cd05631 STKc_GRK4 Catalytic do 100.0 3.3E-34 7.1E-39 336.8 25.8 246 27-292 2-261 (285)
58 cd05599 STKc_NDR_like Catalyti 100.0 2.2E-34 4.8E-39 350.6 24.8 254 26-292 2-296 (364)
59 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.7E-34 3.7E-39 347.1 23.2 245 26-292 2-257 (333)
60 KOG0610 Putative serine/threon 100.0 8.5E-35 1.8E-39 326.8 19.0 269 26-313 78-406 (459)
61 cd05573 STKc_ROCK_NDR_like Cat 100.0 8.9E-35 1.9E-39 352.2 20.8 254 26-292 2-285 (350)
62 cd05587 STKc_cPKC Catalytic do 100.0 3.6E-34 7.8E-39 342.9 25.3 248 26-292 1-257 (324)
63 cd05590 STKc_nPKC_eta Catalyti 100.0 2.2E-34 4.8E-39 343.9 23.4 243 31-292 1-253 (320)
64 cd05575 STKc_SGK Catalytic dom 100.0 2E-34 4.2E-39 345.0 22.4 244 31-292 1-251 (323)
65 cd07862 STKc_CDK6 Catalytic do 100.0 3.2E-34 6.9E-39 337.7 23.8 246 26-292 2-287 (290)
66 cd07848 STKc_CDKL5 Catalytic d 100.0 2.5E-34 5.4E-39 338.1 22.5 248 26-292 2-284 (287)
67 cd05594 STKc_PKB_alpha Catalyt 100.0 1.4E-34 3E-39 346.6 20.6 243 31-292 1-252 (325)
68 cd05102 PTKc_VEGFR3 Catalytic 100.0 2.7E-34 5.8E-39 346.2 23.0 248 26-294 8-332 (338)
69 PHA03212 serine/threonine kina 100.0 3.5E-34 7.7E-39 350.2 24.1 241 25-292 92-376 (391)
70 cd05628 STKc_NDR1 Catalytic do 100.0 9.9E-34 2.2E-38 344.5 27.7 254 26-292 2-293 (363)
71 cd05589 STKc_PKN Catalytic dom 100.0 5.2E-34 1.1E-38 341.5 24.8 246 27-292 1-257 (324)
72 cd05616 STKc_cPKC_beta Catalyt 100.0 5.1E-34 1.1E-38 341.4 24.2 248 26-292 1-257 (323)
73 cd05620 STKc_nPKC_delta Cataly 100.0 4.4E-34 9.4E-39 340.7 23.5 243 31-292 1-248 (316)
74 cd05591 STKc_nPKC_epsilon Cata 100.0 4E-34 8.7E-39 342.0 23.2 243 31-292 1-254 (321)
75 cd05592 STKc_nPKC_theta_delta 100.0 6.3E-34 1.4E-38 339.4 23.7 243 31-292 1-248 (316)
76 cd05596 STKc_ROCK Catalytic do 100.0 1E-33 2.2E-38 344.7 26.0 252 26-292 44-304 (370)
77 cd05588 STKc_aPKC Catalytic do 100.0 7.6E-34 1.7E-38 340.6 24.1 243 31-292 1-262 (329)
78 KOG4279 Serine/threonine prote 100.0 3.8E-35 8.2E-40 341.9 12.3 241 32-292 582-832 (1226)
79 cd05626 STKc_LATS2 Catalytic d 100.0 1.2E-33 2.6E-38 345.9 26.2 255 26-292 2-305 (381)
80 cd06649 PKc_MEK2 Catalytic dom 100.0 1.7E-33 3.8E-38 338.0 26.9 244 26-292 6-301 (331)
81 cd05629 STKc_NDR_like_fungal C 100.0 1.1E-33 2.4E-38 346.0 25.3 254 26-292 2-305 (377)
82 cd05598 STKc_LATS Catalytic do 100.0 5.2E-34 1.1E-38 348.8 22.2 254 26-292 2-301 (376)
83 cd05625 STKc_LATS1 Catalytic d 100.0 1.2E-33 2.7E-38 346.2 25.2 254 26-292 2-305 (382)
84 cd05619 STKc_nPKC_theta Cataly 100.0 8.2E-34 1.8E-38 338.3 22.6 243 31-292 1-248 (316)
85 cd05618 STKc_aPKC_iota Catalyt 100.0 1.2E-33 2.6E-38 338.8 24.2 243 31-292 1-262 (329)
86 cd07874 STKc_JNK3 Catalytic do 100.0 1.3E-33 2.9E-38 342.5 24.7 244 26-292 18-311 (355)
87 cd05621 STKc_ROCK2 Catalytic d 100.0 1.6E-33 3.5E-38 342.6 25.2 252 26-292 44-304 (370)
88 cd05570 STKc_PKC Catalytic dom 100.0 1.2E-33 2.6E-38 337.4 23.7 243 31-292 1-252 (318)
89 cd05582 STKc_RSK_N N-terminal 100.0 5E-34 1.1E-38 340.8 20.2 242 31-292 2-254 (318)
90 PTZ00267 NIMA-related protein 100.0 1.6E-33 3.4E-38 354.0 25.4 246 24-292 66-323 (478)
91 cd05603 STKc_SGK2 Catalytic do 100.0 7.9E-34 1.7E-38 339.5 21.1 243 31-292 1-251 (321)
92 PLN00034 mitogen-activated pro 100.0 2E-33 4.4E-38 340.5 24.8 247 26-292 75-328 (353)
93 PHA02988 hypothetical protein; 100.0 2.1E-33 4.6E-38 329.4 24.1 245 31-295 26-278 (283)
94 cd05601 STKc_CRIK Catalytic do 100.0 1.5E-33 3.2E-38 338.6 23.2 254 26-292 2-263 (330)
95 cd05602 STKc_SGK1 Catalytic do 100.0 7.2E-34 1.6E-38 340.5 20.3 242 31-290 1-245 (325)
96 cd07876 STKc_JNK2 Catalytic do 100.0 2.6E-33 5.7E-38 340.4 25.3 244 26-292 22-315 (359)
97 KOG0197 Tyrosine kinases [Sign 100.0 4.5E-34 9.7E-39 334.6 17.8 243 26-293 207-458 (468)
98 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.7E-33 3.7E-38 334.8 23.0 247 26-292 7-286 (309)
99 cd05604 STKc_SGK3 Catalytic do 100.0 1.2E-33 2.6E-38 338.5 21.3 243 31-292 1-251 (325)
100 cd07875 STKc_JNK1 Catalytic do 100.0 3.5E-33 7.6E-38 340.0 25.4 244 26-292 25-318 (364)
101 cd05615 STKc_cPKC_alpha Cataly 100.0 4E-33 8.6E-38 333.6 25.4 248 26-292 1-257 (323)
102 KOG4721 Serine/threonine prote 100.0 2.4E-34 5.2E-39 329.7 14.1 252 28-310 127-381 (904)
103 cd05096 PTKc_DDR1 Catalytic do 100.0 5.9E-33 1.3E-37 329.4 26.6 250 26-294 6-303 (304)
104 cd07863 STKc_CDK4 Catalytic do 100.0 4.1E-33 8.9E-38 327.9 24.6 246 26-292 1-285 (288)
105 cd05617 STKc_aPKC_zeta Catalyt 100.0 3.7E-33 8.1E-38 334.4 24.6 243 31-292 1-260 (327)
106 PTZ00036 glycogen synthase kin 100.0 1.8E-33 3.8E-38 349.5 22.3 241 26-292 67-351 (440)
107 cd07853 STKc_NLK Catalytic dom 100.0 1.6E-33 3.6E-38 343.9 21.5 249 26-292 1-288 (372)
108 cd05622 STKc_ROCK1 Catalytic d 100.0 6.1E-33 1.3E-37 337.8 26.3 252 26-292 44-304 (371)
109 cd05048 PTKc_Ror Catalytic Dom 100.0 3.5E-33 7.5E-38 327.6 22.6 251 26-295 6-282 (283)
110 PTZ00284 protein kinase; Provi 100.0 2.8E-33 6E-38 351.7 23.0 242 25-292 129-438 (467)
111 PHA03207 serine/threonine kina 100.0 4.7E-33 1E-37 341.8 24.5 243 26-293 93-376 (392)
112 cd06625 STKc_MEKK3_like Cataly 100.0 1.4E-32 3.1E-37 318.6 27.0 253 26-292 3-260 (263)
113 cd05608 STKc_GRK1 Catalytic do 100.0 9.7E-33 2.1E-37 323.4 25.6 241 33-292 1-257 (280)
114 cd05627 STKc_NDR2 Catalytic do 100.0 4.3E-33 9.2E-38 338.6 23.2 254 26-292 2-293 (360)
115 PTZ00283 serine/threonine prot 100.0 1E-32 2.2E-37 346.6 27.0 249 26-292 33-297 (496)
116 cd07868 STKc_CDK8 Catalytic do 100.0 4.4E-33 9.5E-38 332.5 22.2 243 30-292 6-314 (317)
117 cd06650 PKc_MEK1 Catalytic dom 100.0 1.2E-32 2.6E-37 330.7 25.9 244 26-292 6-299 (333)
118 cd05605 STKc_GRK4_like Catalyt 100.0 1.2E-32 2.5E-37 323.7 24.7 247 26-292 1-261 (285)
119 cd05104 PTKc_Kit Catalytic dom 100.0 9.5E-33 2.1E-37 336.8 24.3 249 26-295 36-373 (375)
120 KOG0666 Cyclin C-dependent kin 100.0 4.7E-34 1E-38 307.7 11.1 252 25-292 24-337 (438)
121 cd05106 PTKc_CSF-1R Catalytic 100.0 9.9E-33 2.2E-37 336.3 24.2 249 26-295 39-371 (374)
122 cd07873 STKc_PCTAIRE1 Catalyti 100.0 1.3E-32 2.8E-37 326.0 24.5 247 26-292 7-286 (301)
123 cd05597 STKc_DMPK_like Catalyt 100.0 1.3E-32 2.8E-37 330.4 24.6 253 26-292 2-266 (331)
124 cd05586 STKc_Sck1_like Catalyt 100.0 3.7E-33 8.1E-38 335.1 19.8 242 33-292 1-253 (330)
125 PHA03211 serine/threonine kina 100.0 1.5E-32 3.2E-37 339.7 25.5 243 24-292 168-455 (461)
126 cd05090 PTKc_Ror1 Catalytic do 100.0 2E-32 4.3E-37 321.3 25.4 250 26-294 6-281 (283)
127 KOG0604 MAP kinase-activated p 100.0 7.5E-34 1.6E-38 305.2 11.5 235 31-293 68-323 (400)
128 KOG0286 G-protein beta subunit 100.0 3.3E-31 7.1E-36 282.7 31.3 294 1132-1553 48-343 (343)
129 cd07861 STKc_CDK1_euk Catalyti 100.0 2.1E-32 4.5E-37 321.3 24.4 248 26-292 1-282 (285)
130 KOG0577 Serine/threonine prote 100.0 6.9E-34 1.5E-38 327.1 11.1 255 17-292 19-278 (948)
131 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.5E-32 5.3E-37 317.5 24.3 249 26-294 6-263 (266)
132 KOG0690 Serine/threonine prote 100.0 5.6E-34 1.2E-38 307.7 9.6 248 26-292 169-424 (516)
133 KOG0607 MAP kinase-interacting 100.0 8.8E-34 1.9E-38 306.3 11.1 252 30-292 83-361 (463)
134 cd05094 PTKc_TrkC Catalytic do 100.0 3E-32 6.4E-37 321.3 25.2 254 26-299 6-285 (291)
135 PF00069 Pkinase: Protein kina 100.0 5.1E-33 1.1E-37 321.4 18.1 247 27-292 1-257 (260)
136 cd05623 STKc_MRCK_alpha Cataly 100.0 2.6E-32 5.6E-37 328.0 24.4 254 26-292 2-266 (332)
137 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.2E-32 2.7E-37 332.5 21.7 248 20-292 12-298 (343)
138 KOG0272 U4/U6 small nuclear ri 100.0 8.6E-33 1.9E-37 307.8 18.5 257 1121-1459 198-458 (459)
139 cd05580 STKc_PKA Catalytic dom 100.0 4.8E-32 1E-36 319.3 25.6 245 26-292 2-254 (290)
140 PHA03209 serine/threonine kina 100.0 1.7E-32 3.6E-37 332.7 22.2 239 25-292 66-351 (357)
141 cd05049 PTKc_Trk Catalytic dom 100.0 2E-32 4.3E-37 320.6 22.0 247 26-294 6-279 (280)
142 cd05093 PTKc_TrkB Catalytic do 100.0 4.5E-32 9.8E-37 319.2 24.8 247 25-294 5-277 (288)
143 cd05108 PTKc_EGFR Catalytic do 100.0 4.7E-32 1E-36 323.5 25.3 251 25-297 7-269 (316)
144 PTZ00266 NIMA-related protein 100.0 3.7E-32 8.1E-37 348.9 25.7 248 26-292 14-295 (1021)
145 cd06628 STKc_MAPKKK_Byr2_like 100.0 8.3E-32 1.8E-36 313.0 26.4 256 26-292 1-264 (267)
146 KOG0662 Cyclin-dependent kinas 100.0 2.2E-33 4.7E-38 280.0 11.2 254 26-305 3-289 (292)
147 cd08219 STKc_Nek3 Catalytic do 100.0 6.3E-32 1.4E-36 311.8 25.2 243 26-292 1-252 (255)
148 cd07867 STKc_CDC2L6 Catalytic 100.0 2.5E-32 5.3E-37 326.0 22.4 243 30-292 6-314 (317)
149 cd08529 STKc_FA2-like Catalyti 100.0 7.9E-32 1.7E-36 310.9 25.9 247 26-292 1-253 (256)
150 cd06646 STKc_MAP4K5 Catalytic 100.0 5.3E-32 1.2E-36 314.7 24.4 249 26-293 10-266 (267)
151 cd05624 STKc_MRCK_beta Catalyt 100.0 3.8E-32 8.3E-37 326.2 23.7 253 26-292 2-266 (331)
152 cd05062 PTKc_IGF-1R Catalytic 100.0 6.3E-32 1.4E-36 316.0 24.8 250 26-294 7-276 (277)
153 cd05607 STKc_GRK7 Catalytic do 100.0 7.5E-32 1.6E-36 315.4 25.3 240 33-292 1-250 (277)
154 cd05114 PTKc_Tec_Rlk Catalytic 100.0 6.7E-32 1.5E-36 311.8 24.5 246 26-293 5-255 (256)
155 cd05033 PTKc_EphR Catalytic do 100.0 1.2E-31 2.6E-36 311.7 26.7 249 26-295 5-264 (266)
156 cd08227 PK_STRAD_alpha Pseudok 100.0 4.3E-32 9.4E-37 325.4 23.5 253 29-292 2-307 (327)
157 KOG4645 MAPKKK (MAP kinase kin 100.0 4.4E-34 9.6E-39 356.8 6.4 253 26-292 1236-1494(1509)
158 cd06631 STKc_YSK4 Catalytic do 100.0 8.5E-32 1.8E-36 312.6 25.2 256 26-292 1-262 (265)
159 cd05091 PTKc_Ror2 Catalytic do 100.0 2.5E-32 5.4E-37 320.4 20.8 250 26-294 6-281 (283)
160 cd05082 PTKc_Csk Catalytic dom 100.0 6.4E-32 1.4E-36 312.0 23.8 242 26-294 7-254 (256)
161 cd05084 PTKc_Fes Catalytic dom 100.0 5.8E-32 1.3E-36 311.5 23.2 245 31-294 1-251 (252)
162 cd05089 PTKc_Tie1 Catalytic do 100.0 5.5E-32 1.2E-36 320.0 23.3 247 26-294 3-273 (297)
163 cd06651 STKc_MEKK3 Catalytic d 100.0 1.1E-31 2.5E-36 311.9 25.5 252 26-292 3-261 (266)
164 cd05061 PTKc_InsR Catalytic do 100.0 9.6E-32 2.1E-36 316.4 25.1 256 25-299 6-281 (288)
165 cd05052 PTKc_Abl Catalytic dom 100.0 1E-31 2.2E-36 311.7 24.6 246 26-295 7-261 (263)
166 cd05053 PTKc_FGFR Catalytic do 100.0 8.6E-32 1.9E-36 317.5 24.2 251 26-295 13-290 (293)
167 cd07839 STKc_CDK5 Catalytic do 100.0 2.4E-32 5.1E-37 320.7 19.1 248 26-292 1-281 (284)
168 cd05109 PTKc_HER2 Catalytic do 100.0 1.4E-31 3.1E-36 313.4 25.5 250 23-294 5-266 (279)
169 cd05039 PTKc_Csk_like Catalyti 100.0 1.4E-31 3E-36 309.2 24.9 243 26-294 7-254 (256)
170 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.2E-31 2.7E-36 309.7 24.4 246 26-293 5-255 (256)
171 cd05032 PTKc_InsR_like Catalyt 100.0 1.4E-31 3E-36 313.0 25.0 250 26-294 7-276 (277)
172 cd05630 STKc_GRK6 Catalytic do 100.0 1.3E-31 2.7E-36 314.9 24.7 246 27-292 2-261 (285)
173 cd06645 STKc_MAP4K3 Catalytic 100.0 5.2E-32 1.1E-36 314.8 21.2 248 26-292 10-265 (267)
174 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.2E-31 2.6E-36 328.2 25.4 250 25-295 37-396 (400)
175 PF07714 Pkinase_Tyr: Protein 100.0 3.5E-32 7.7E-37 314.9 19.2 244 28-293 2-259 (259)
176 cd00192 PTKc Catalytic domain 100.0 1.2E-31 2.5E-36 310.0 23.5 244 31-293 1-261 (262)
177 cd08223 STKc_Nek4 Catalytic do 100.0 2.8E-31 6.1E-36 306.6 26.6 247 26-292 1-254 (257)
178 KOG0579 Ste20-like serine/thre 100.0 1.9E-33 4.2E-38 324.3 8.4 260 15-292 22-289 (1187)
179 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.5E-31 3.2E-36 312.9 24.5 250 26-294 7-276 (277)
180 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.4E-31 2.9E-36 318.2 24.5 252 26-296 19-299 (307)
181 cd08228 STKc_Nek6 Catalytic do 100.0 2.7E-31 5.9E-36 308.7 26.3 251 26-295 3-264 (267)
182 KOG0612 Rho-associated, coiled 100.0 4E-33 8.6E-38 344.3 11.3 253 26-292 76-338 (1317)
183 cd05068 PTKc_Frk_like Catalyti 100.0 2.1E-31 4.6E-36 308.6 25.1 245 26-294 7-259 (261)
184 cd05092 PTKc_TrkA Catalytic do 100.0 1.8E-31 3.8E-36 312.8 24.5 250 25-294 5-279 (280)
185 cd05609 STKc_MAST Catalytic do 100.0 2.9E-31 6.2E-36 315.1 26.6 254 26-292 2-273 (305)
186 cd05054 PTKc_VEGFR Catalytic d 100.0 6.2E-32 1.3E-36 324.9 21.1 250 26-296 8-333 (337)
187 cd06615 PKc_MEK Catalytic doma 100.0 2.5E-31 5.4E-36 316.0 26.0 244 26-292 2-287 (308)
188 cd05088 PTKc_Tie2 Catalytic do 100.0 1.1E-31 2.5E-36 318.2 23.0 248 26-295 8-279 (303)
189 cd05059 PTKc_Tec_like Catalyti 100.0 1.1E-31 2.4E-36 310.1 22.3 246 26-293 5-255 (256)
190 cd05051 PTKc_DDR Catalytic dom 100.0 1.6E-31 3.5E-36 315.7 24.1 250 26-294 6-295 (296)
191 cd05116 PTKc_Syk Catalytic dom 100.0 1.7E-31 3.8E-36 308.7 23.8 242 32-294 2-253 (257)
192 cd05072 PTKc_Lyn Catalytic dom 100.0 2E-31 4.4E-36 308.7 24.4 245 26-294 7-259 (261)
193 cd07841 STKc_CDK7 Catalytic do 100.0 1.6E-31 3.5E-36 316.1 24.0 251 26-292 1-282 (298)
194 KOG4236 Serine/threonine prote 100.0 5.7E-33 1.2E-37 315.5 11.0 252 20-292 559-819 (888)
195 cd06652 STKc_MEKK2 Catalytic d 100.0 3.1E-31 6.7E-36 308.0 25.8 252 26-292 3-261 (265)
196 PRK13184 pknD serine/threonine 100.0 2.4E-31 5.2E-36 340.6 26.9 257 26-294 3-288 (932)
197 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.9E-31 4.1E-36 316.5 24.3 252 25-295 15-295 (304)
198 cd05111 PTK_HER3 Pseudokinase 100.0 2.2E-31 4.7E-36 311.9 24.5 249 25-295 7-267 (279)
199 cd05574 STKc_phototropin_like 100.0 4E-31 8.6E-36 315.5 26.8 255 26-292 2-289 (316)
200 cd06619 PKc_MKK5 Catalytic dom 100.0 4.3E-31 9.2E-36 309.4 26.2 240 26-292 2-253 (279)
201 cd05632 STKc_GRK5 Catalytic do 100.0 3.9E-31 8.5E-36 310.7 26.0 246 27-292 2-261 (285)
202 cd05578 STKc_Yank1 Catalytic d 100.0 1.2E-31 2.6E-36 310.0 21.2 247 26-292 1-255 (258)
203 KOG1026 Nerve growth factor re 100.0 3.3E-32 7.2E-37 333.0 17.1 256 16-294 478-760 (774)
204 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.2E-31 6.9E-36 316.0 25.3 249 26-295 13-292 (314)
205 KOG0295 WD40 repeat-containing 100.0 4.9E-31 1.1E-35 288.9 24.3 307 1122-1553 91-404 (406)
206 cd07832 STKc_CCRK Catalytic do 100.0 2.6E-31 5.6E-36 312.1 24.0 249 26-292 1-282 (286)
207 cd05572 STKc_cGK_PKG Catalytic 100.0 2.4E-31 5.1E-36 308.3 23.4 240 33-292 1-252 (262)
208 cd06630 STKc_MEKK1 Catalytic d 100.0 2.8E-31 6.1E-36 308.6 24.0 254 26-292 1-264 (268)
209 cd06644 STKc_STK10_LOK Catalyt 100.0 3.9E-31 8.4E-36 311.9 25.4 252 24-292 11-269 (292)
210 cd06632 STKc_MEKK1_plant Catal 100.0 3.2E-31 6.8E-36 306.1 24.0 250 26-292 1-255 (258)
211 cd05035 PTKc_Axl_like Catalyti 100.0 3.3E-31 7.1E-36 308.8 24.2 251 27-295 1-271 (273)
212 cd07855 STKc_ERK5 Catalytic do 100.0 1.6E-31 3.4E-36 321.6 22.1 252 26-292 6-294 (334)
213 cd05045 PTKc_RET Catalytic dom 100.0 2.6E-31 5.6E-36 313.1 23.4 249 26-295 1-285 (290)
214 cd06626 STKc_MEKK4 Catalytic d 100.0 8.2E-31 1.8E-35 303.9 27.1 253 26-292 1-261 (264)
215 cd05060 PTKc_Syk_like Catalyti 100.0 4E-31 8.6E-36 305.6 24.2 244 31-295 1-254 (257)
216 KOG0574 STE20-like serine/thre 100.0 4.9E-34 1.1E-38 304.9 -0.1 244 26-293 34-284 (502)
217 cd05097 PTKc_DDR_like Catalyti 100.0 2.8E-31 6.1E-36 313.6 23.4 250 26-294 6-294 (295)
218 cd05055 PTKc_PDGFR Catalytic d 100.0 3.8E-31 8.1E-36 313.5 24.3 248 26-294 36-299 (302)
219 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 6.7E-31 1.5E-35 308.3 26.2 249 27-294 6-279 (283)
220 cd06638 STKc_myosinIIIA Cataly 100.0 5.2E-31 1.1E-35 309.7 24.9 250 26-293 19-284 (286)
221 cd07850 STKc_JNK Catalytic dom 100.0 3.3E-31 7.2E-36 321.2 23.9 244 26-292 17-311 (353)
222 cd05075 PTKc_Axl Catalytic dom 100.0 3.9E-31 8.4E-36 308.3 23.6 250 28-295 2-270 (272)
223 cd07844 STKc_PCTAIRE_like Cata 100.0 4.5E-31 9.7E-36 311.1 24.4 247 26-292 6-288 (291)
224 cd06654 STKc_PAK1 Catalytic do 100.0 6.4E-31 1.4E-35 310.7 25.7 245 25-292 20-270 (296)
225 cd06643 STKc_SLK Catalytic dom 100.0 5.7E-31 1.2E-35 308.8 25.0 248 27-292 7-262 (282)
226 cd08221 STKc_Nek9 Catalytic do 100.0 9.8E-31 2.1E-35 302.0 26.5 245 26-293 1-254 (256)
227 cd06613 STKc_MAP4K3_like Catal 100.0 7.3E-31 1.6E-35 304.0 25.4 248 26-292 4-260 (262)
228 cd05633 STKc_GRK3 Catalytic do 100.0 6.3E-31 1.4E-35 308.0 24.9 241 32-292 1-255 (279)
229 cd05066 PTKc_EphR_A Catalytic 100.0 5.8E-31 1.3E-35 306.1 24.4 250 26-295 5-265 (267)
230 cd07843 STKc_CDC2L1 Catalytic 100.0 3E-31 6.6E-36 312.9 22.3 248 26-292 6-290 (293)
231 cd07865 STKc_CDK9 Catalytic do 100.0 3.4E-31 7.3E-36 314.9 22.8 252 26-292 13-307 (310)
232 cd05148 PTKc_Srm_Brk Catalytic 100.0 2.5E-31 5.5E-36 307.8 21.1 247 26-294 7-259 (261)
233 cd07870 STKc_PFTAIRE2 Catalyti 100.0 7.9E-31 1.7E-35 309.1 25.6 247 26-292 6-288 (291)
234 KOG0669 Cyclin T-dependent kin 100.0 9.9E-34 2.1E-38 296.8 0.7 252 26-292 18-315 (376)
235 KOG0584 Serine/threonine prote 100.0 3.2E-32 6.9E-37 321.3 13.2 249 22-292 37-296 (632)
236 cd05043 PTK_Ryk Pseudokinase d 100.0 6.9E-31 1.5E-35 307.7 24.5 248 26-294 7-274 (280)
237 cd05115 PTKc_Zap-70 Catalytic 100.0 7.9E-31 1.7E-35 303.2 24.7 243 32-295 2-254 (257)
238 cd06609 STKc_MST3_like Catalyt 100.0 5.7E-31 1.2E-35 307.4 23.6 245 26-292 2-251 (274)
239 KOG0983 Mitogen-activated prot 100.0 7E-32 1.5E-36 286.3 14.2 254 16-292 86-349 (391)
240 cd07849 STKc_ERK1_2_like Catal 100.0 3.6E-31 7.8E-36 318.7 22.5 249 26-292 6-292 (336)
241 cd07847 STKc_CDKL1_4 Catalytic 100.0 6.9E-31 1.5E-35 308.5 24.3 248 26-292 2-283 (286)
242 cd06611 STKc_SLK_like Catalyti 100.0 4E-31 8.8E-36 309.6 22.3 250 26-292 6-262 (280)
243 cd05100 PTKc_FGFR3 Catalytic d 100.0 6.2E-31 1.3E-35 316.4 24.2 252 26-296 13-293 (334)
244 cd05606 STKc_beta_ARK Catalyti 100.0 9.6E-31 2.1E-35 306.2 25.0 243 32-292 1-255 (278)
245 cd07831 STKc_MOK Catalytic dom 100.0 4.3E-31 9.4E-36 309.5 22.1 244 27-292 1-279 (282)
246 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 7.6E-31 1.7E-35 308.1 24.2 249 26-295 5-282 (284)
247 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.4E-30 3.1E-35 303.6 26.2 255 25-292 1-269 (272)
248 cd05095 PTKc_DDR2 Catalytic do 100.0 9E-31 2E-35 309.4 24.9 250 26-294 6-295 (296)
249 cd06637 STKc_TNIK Catalytic do 100.0 7.4E-31 1.6E-35 305.9 23.7 249 26-292 7-269 (272)
250 cd06656 STKc_PAK3 Catalytic do 100.0 8.1E-31 1.8E-35 309.9 24.3 245 25-292 19-269 (297)
251 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4.8E-31 1E-35 310.0 22.3 250 26-292 2-262 (286)
252 cd05050 PTKc_Musk Catalytic do 100.0 7.7E-31 1.7E-35 308.7 23.9 248 25-294 5-287 (288)
253 cd05034 PTKc_Src_like Catalyti 100.0 9.8E-31 2.1E-35 302.9 24.2 246 26-293 7-258 (261)
254 cd05046 PTK_CCK4 Pseudokinase 100.0 9.6E-31 2.1E-35 305.6 24.3 249 26-294 6-274 (275)
255 cd06640 STKc_MST4 Catalytic do 100.0 9E-31 1.9E-35 306.3 24.0 245 26-292 5-253 (277)
256 cd06617 PKc_MKK3_6 Catalytic d 100.0 1.2E-30 2.6E-35 305.9 25.1 250 26-292 2-261 (283)
257 KOG1187 Serine/threonine prote 100.0 6E-31 1.3E-35 314.0 22.6 248 26-295 76-351 (361)
258 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.5E-30 3.3E-35 302.0 25.5 251 26-292 2-264 (267)
259 cd06612 STKc_MST1_2 Catalytic 100.0 9.1E-31 2E-35 302.0 23.3 243 26-292 4-253 (256)
260 cd05581 STKc_PDK1 Catalytic do 100.0 4.8E-31 1E-35 308.5 21.1 255 26-292 2-277 (280)
261 cd06655 STKc_PAK2 Catalytic do 100.0 1.2E-30 2.7E-35 308.2 24.8 244 25-292 19-269 (296)
262 PHA03210 serine/threonine kina 100.0 3.3E-31 7.2E-36 334.0 21.2 249 26-292 149-454 (501)
263 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.7E-30 3.7E-35 302.2 25.6 252 26-295 6-266 (268)
264 cd05057 PTKc_EGFR_like Catalyt 100.0 1.7E-30 3.6E-35 304.4 25.5 251 25-295 7-267 (279)
265 cd05083 PTKc_Chk Catalytic dom 100.0 8.3E-31 1.8E-35 302.4 22.5 242 25-294 6-252 (254)
266 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 9.2E-31 2E-35 303.1 22.9 246 26-294 7-258 (260)
267 cd07842 STKc_CDK8_like Catalyt 100.0 6.9E-31 1.5E-35 313.2 22.4 252 26-292 1-313 (316)
268 cd05107 PTKc_PDGFR_beta Cataly 100.0 7.4E-31 1.6E-35 321.0 23.1 249 26-295 38-398 (401)
269 cd05085 PTKc_Fer Catalytic dom 100.0 1.4E-30 3.1E-35 299.4 24.2 244 31-294 1-249 (250)
270 cd05042 PTKc_Aatyk Catalytic d 100.0 8.2E-31 1.8E-35 305.1 22.4 250 31-293 1-267 (269)
271 KOG0285 Pleiotropic regulator 100.0 3.6E-30 7.9E-35 280.3 25.7 304 1122-1553 134-437 (460)
272 cd07860 STKc_CDK2_3 Catalytic 100.0 5.4E-31 1.2E-35 309.2 20.9 248 26-292 1-281 (284)
273 cd05071 PTKc_Src Catalytic dom 100.0 1.2E-30 2.6E-35 302.7 23.5 245 26-293 7-257 (262)
274 cd06608 STKc_myosinIII_like Ca 100.0 1.3E-30 2.9E-35 303.8 23.9 249 26-292 7-272 (275)
275 cd07845 STKc_CDK10 Catalytic d 100.0 1.3E-30 2.9E-35 310.0 24.2 248 26-292 8-290 (309)
276 cd05065 PTKc_EphR_B Catalytic 100.0 1.6E-30 3.5E-35 302.7 24.4 251 26-294 5-266 (269)
277 cd05056 PTKc_FAK Catalytic dom 100.0 1.6E-30 3.4E-35 302.9 24.3 247 25-295 6-264 (270)
278 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.3E-30 2.8E-35 301.9 23.3 244 26-294 7-258 (260)
279 cd08218 STKc_Nek1 Catalytic do 100.0 2.1E-30 4.5E-35 299.2 25.0 247 26-292 1-253 (256)
280 cd06605 PKc_MAPKK Catalytic do 100.0 4.5E-31 9.8E-36 306.4 19.5 244 26-292 2-257 (265)
281 cd06623 PKc_MAPKK_plant_like C 100.0 2.5E-30 5.4E-35 299.7 25.7 246 26-292 2-256 (264)
282 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 6.7E-31 1.4E-35 308.6 21.2 244 26-292 6-266 (284)
283 cd08217 STKc_Nek2 Catalytic do 100.0 1.9E-30 4E-35 300.7 24.6 247 26-292 1-262 (265)
284 cd07846 STKc_CDKL2_3 Catalytic 100.0 5.6E-31 1.2E-35 309.3 20.2 248 26-292 2-283 (286)
285 cd05041 PTKc_Fes_like Catalyti 100.0 1.9E-30 4E-35 298.7 24.2 245 31-294 1-250 (251)
286 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3.7E-30 8E-35 298.9 26.9 249 26-295 3-264 (267)
287 smart00219 TyrKc Tyrosine kina 100.0 1.3E-30 2.9E-35 300.7 23.0 245 28-292 2-257 (258)
288 cd05613 STKc_MSK1_N N-terminal 100.0 1.7E-30 3.8E-35 306.0 24.3 252 26-292 1-268 (290)
289 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 1.2E-30 2.6E-35 302.7 22.4 234 31-293 1-261 (262)
290 cd05040 PTKc_Ack_like Catalyti 100.0 1.5E-30 3.2E-35 300.7 23.1 243 31-293 1-255 (257)
291 cd05112 PTKc_Itk Catalytic dom 100.0 1.9E-30 4.2E-35 299.5 24.0 246 26-293 5-255 (256)
292 cd05577 STKc_GRK Catalytic dom 100.0 1.5E-30 3.2E-35 304.4 23.3 240 33-292 1-254 (277)
293 cd06636 STKc_MAP4K4_6 Catalyti 100.0 2E-30 4.4E-35 304.0 24.4 250 25-292 16-279 (282)
294 KOG1035 eIF-2alpha kinase GCN2 100.0 2.2E-31 4.9E-36 331.7 16.8 253 26-292 480-871 (1351)
295 cd08220 STKc_Nek8 Catalytic do 100.0 2.6E-30 5.7E-35 298.2 24.7 246 26-292 1-253 (256)
296 cd05047 PTKc_Tie Catalytic dom 100.0 1.6E-30 3.4E-35 303.0 23.0 243 31-295 1-267 (270)
297 cd06607 STKc_TAO Catalytic dom 100.0 4.3E-30 9.4E-35 305.3 27.1 247 26-292 16-267 (307)
298 cd06642 STKc_STK25-YSK1 Cataly 100.0 5.1E-31 1.1E-35 308.3 18.9 245 26-292 5-253 (277)
299 cd08229 STKc_Nek7 Catalytic do 100.0 1.6E-30 3.5E-35 302.1 22.9 250 26-294 3-263 (267)
300 cd05103 PTKc_VEGFR2 Catalytic 100.0 1.2E-30 2.7E-35 314.8 22.5 248 26-295 8-338 (343)
301 cd06641 STKc_MST3 Catalytic do 100.0 3.1E-30 6.8E-35 301.7 25.2 244 27-292 6-253 (277)
302 cd07836 STKc_Pho85 Catalytic d 100.0 1.3E-30 2.9E-35 305.8 22.1 247 26-292 1-281 (284)
303 cd05044 PTKc_c-ros Catalytic d 100.0 1.3E-30 2.9E-35 303.3 21.8 245 31-294 1-268 (269)
304 cd06606 STKc_MAPKKK Catalytic 100.0 7.3E-30 1.6E-34 294.2 27.7 249 26-292 1-257 (260)
305 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 5.5E-31 1.2E-35 304.7 18.3 237 31-293 1-257 (258)
306 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.5E-30 3.2E-35 313.5 22.7 248 26-292 6-291 (337)
307 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3E-30 6.5E-35 300.5 24.4 250 31-293 1-267 (269)
308 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 4.7E-30 1E-34 301.3 26.2 249 26-295 5-282 (284)
309 cd07835 STKc_CDK1_like Catalyt 100.0 1.2E-30 2.6E-35 306.0 21.2 247 27-292 1-280 (283)
310 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 1.8E-30 3.8E-35 303.3 22.4 233 32-293 2-273 (274)
311 cd07837 STKc_CdkB_plant Cataly 100.0 1.9E-30 4.1E-35 306.4 22.6 248 26-292 2-291 (295)
312 cd06639 STKc_myosinIIIB Cataly 100.0 6.1E-30 1.3E-34 301.5 27.0 248 26-292 23-287 (291)
313 cd06627 STKc_Cdc7_like Catalyt 100.0 7.2E-30 1.6E-34 293.9 26.9 247 26-292 1-251 (254)
314 KOG0194 Protein tyrosine kinas 100.0 5.9E-31 1.3E-35 314.1 18.3 250 26-294 158-418 (474)
315 cd05069 PTKc_Yes Catalytic dom 100.0 3.2E-30 7E-35 298.6 24.0 246 26-294 7-258 (260)
316 cd05058 PTKc_Met_Ron Catalytic 100.0 2.9E-30 6.4E-35 299.1 23.6 248 31-295 1-258 (262)
317 cd06658 STKc_PAK5 Catalytic do 100.0 1.8E-30 4E-35 306.1 22.1 244 26-292 23-272 (292)
318 cd06917 STKc_NAK1_like Catalyt 100.0 3.4E-30 7.3E-35 301.3 24.2 246 26-292 2-255 (277)
319 KOG0696 Serine/threonine prote 100.0 1.3E-31 2.8E-36 297.1 11.2 243 25-286 349-595 (683)
320 cd05073 PTKc_Hck Catalytic dom 100.0 5.7E-30 1.2E-34 296.5 25.6 244 26-294 7-258 (260)
321 PHA02882 putative serine/threo 100.0 5.9E-30 1.3E-34 302.1 26.1 257 26-293 13-293 (294)
322 cd07833 STKc_CDKL Catalytic do 100.0 1.8E-30 4E-35 305.2 21.6 249 26-292 2-285 (288)
323 cd05122 PKc_STE Catalytic doma 100.0 7.4E-30 1.6E-34 292.9 26.2 243 26-292 1-251 (253)
324 PLN00009 cyclin-dependent kina 100.0 3.3E-30 7.3E-35 304.2 23.7 248 26-292 3-284 (294)
325 cd06624 STKc_ASK Catalytic dom 100.0 8.4E-30 1.8E-34 296.5 26.7 244 29-292 12-265 (268)
326 KOG0986 G protein-coupled rece 100.0 3.4E-31 7.4E-36 298.7 14.4 247 26-292 186-446 (591)
327 cd08215 STKc_Nek Catalytic dom 100.0 6E-30 1.3E-34 295.0 25.1 247 26-292 1-255 (258)
328 cd07840 STKc_CDK9_like Catalyt 100.0 2.9E-30 6.2E-35 303.2 22.6 248 27-292 1-284 (287)
329 KOG0614 cGMP-dependent protein 100.0 3.3E-32 7.1E-37 309.5 5.9 255 26-307 421-685 (732)
330 cd06635 STKc_TAO1 Catalytic do 100.0 5.8E-30 1.3E-34 305.6 25.6 246 26-293 26-278 (317)
331 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.5E-30 9.7E-35 298.9 23.8 249 32-293 2-266 (268)
332 cd06653 STKc_MEKK3_like_1 Cata 100.0 8.1E-30 1.7E-34 296.0 25.9 252 26-292 3-261 (264)
333 KOG0279 G protein beta subunit 100.0 1.5E-29 3.3E-34 268.9 25.4 262 1127-1461 51-313 (315)
334 cd08226 PK_STRAD_beta Pseudoki 100.0 2.7E-30 5.8E-35 310.0 22.2 251 31-292 4-308 (328)
335 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 5.2E-30 1.1E-34 300.6 24.0 250 26-295 5-282 (284)
336 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.7E-30 5.9E-35 298.6 21.0 236 31-293 1-258 (259)
337 cd07854 STKc_MAPK4_6 Catalytic 100.0 3.1E-30 6.7E-35 311.3 22.0 248 26-292 6-300 (342)
338 cd08216 PK_STRAD Pseudokinase 100.0 2.4E-30 5.1E-35 308.5 20.8 256 26-292 3-295 (314)
339 cd06633 STKc_TAO3 Catalytic do 100.0 8.5E-30 1.8E-34 303.6 25.4 247 26-292 22-273 (313)
340 cd07834 STKc_MAPK Catalytic do 100.0 1.8E-30 3.9E-35 311.9 19.7 251 26-292 1-289 (330)
341 cd05110 PTKc_HER4 Catalytic do 100.0 5.2E-30 1.1E-34 304.0 23.3 248 26-295 8-267 (303)
342 cd05579 STKc_MAST_like Catalyt 100.0 3.3E-30 7.1E-35 298.6 20.9 248 33-292 1-257 (265)
343 cd08225 STKc_Nek5 Catalytic do 100.0 5.9E-30 1.3E-34 295.4 22.9 247 26-292 1-254 (257)
344 cd07866 STKc_BUR1 Catalytic do 100.0 3.2E-30 6.9E-35 306.7 21.1 255 26-292 9-308 (311)
345 PTZ00024 cyclin-dependent prot 100.0 3.8E-30 8.3E-35 309.7 21.7 258 26-292 9-313 (335)
346 cd05611 STKc_Rim15_like Cataly 100.0 8.4E-30 1.8E-34 295.0 23.7 239 31-292 2-251 (260)
347 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.8E-29 3.8E-34 297.0 26.8 244 26-292 2-266 (287)
348 cd06616 PKc_MKK4 Catalytic dom 100.0 5.5E-30 1.2E-34 301.4 22.0 248 26-292 5-267 (288)
349 cd07852 STKc_MAPK15 Catalytic 100.0 3.6E-30 7.7E-35 310.2 20.7 252 26-292 8-295 (337)
350 cd07857 STKc_MPK1 Catalytic do 100.0 1E-29 2.2E-34 305.5 24.6 252 26-292 1-292 (332)
351 cd06618 PKc_MKK7 Catalytic dom 100.0 1.2E-29 2.7E-34 299.7 24.8 249 26-292 16-273 (296)
352 cd08530 STKc_CNK2-like Catalyt 100.0 8.6E-30 1.9E-34 293.8 22.7 245 26-292 1-253 (256)
353 cd06659 STKc_PAK6 Catalytic do 100.0 6.6E-30 1.4E-34 302.1 22.0 244 26-292 22-271 (297)
354 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.2E-29 2.6E-34 306.1 24.6 244 26-292 16-298 (343)
355 cd07879 STKc_p38delta_MAPK13 C 100.0 8.7E-30 1.9E-34 307.4 23.2 243 26-292 16-297 (342)
356 cd07838 STKc_CDK4_6_like Catal 100.0 1.4E-29 3.1E-34 297.3 24.2 245 27-292 1-284 (287)
357 PHA03390 pk1 serine/threonine- 100.0 1.9E-29 4.1E-34 293.4 24.5 236 26-292 15-262 (267)
358 cd06614 STKc_PAK Catalytic dom 100.0 1.2E-29 2.6E-34 298.2 23.0 243 26-292 20-270 (286)
359 cd06647 STKc_PAK_I Catalytic d 100.0 1.4E-29 3.1E-34 298.7 23.1 244 26-292 20-269 (293)
360 cd07851 STKc_p38 Catalytic dom 100.0 6.2E-30 1.3E-34 308.8 20.2 244 26-292 16-298 (343)
361 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.4E-29 3.1E-34 295.2 22.4 251 27-295 1-271 (273)
362 cd07877 STKc_p38alpha_MAPK14 C 100.0 2.2E-29 4.8E-34 304.1 24.8 244 26-292 18-300 (345)
363 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 1.6E-29 3.4E-34 303.1 23.1 244 26-292 11-288 (328)
364 cd05583 STKc_MSK_N N-terminal 100.0 2.1E-29 4.5E-34 296.5 23.6 252 26-292 1-266 (288)
365 cd06634 STKc_TAO2 Catalytic do 100.0 1.6E-29 3.5E-34 300.5 22.6 245 26-292 16-267 (308)
366 cd05123 STKc_AGC Catalytic dom 100.0 1.7E-29 3.6E-34 290.4 22.0 241 33-292 1-247 (250)
367 cd07864 STKc_CDK12 Catalytic d 100.0 1.8E-29 3.9E-34 299.1 22.8 249 26-292 8-299 (302)
368 cd08222 STKc_Nek11 Catalytic d 100.0 9.4E-30 2E-34 294.6 19.9 249 26-292 1-257 (260)
369 cd07830 STKc_MAK_like Catalyti 100.0 1E-29 2.2E-34 298.1 20.4 245 27-292 1-280 (283)
370 KOG0281 Beta-TrCP (transducin 100.0 6.2E-30 1.4E-34 276.7 16.7 294 1121-1553 176-475 (499)
371 cd06648 STKc_PAK_II Catalytic 100.0 4.3E-29 9.4E-34 293.4 25.4 243 26-292 20-269 (285)
372 cd08528 STKc_Nek10 Catalytic d 100.0 2.8E-29 6E-34 292.2 23.5 249 26-294 1-268 (269)
373 KOG1095 Protein tyrosine kinas 100.0 1.6E-29 3.6E-34 320.5 22.4 244 26-293 693-958 (1025)
374 cd07829 STKc_CDK_like Catalyti 100.0 2E-29 4.4E-34 295.3 21.0 246 27-292 1-279 (282)
375 cd05610 STKc_MASTL Catalytic d 100.0 4.6E-29 9.9E-34 324.1 26.4 145 26-172 5-152 (669)
376 KOG0271 Notchless-like WD40 re 100.0 3.2E-29 6.9E-34 275.2 20.8 289 1178-1553 106-437 (480)
377 KOG0603 Ribosomal protein S6 k 100.0 5.8E-30 1.2E-34 304.0 15.9 236 25-292 322-563 (612)
378 cd05118 STKc_CMGC Catalytic do 100.0 2E-29 4.4E-34 295.4 20.1 247 27-292 1-280 (283)
379 cd06657 STKc_PAK4 Catalytic do 100.0 4.6E-29 1E-33 294.1 22.2 243 27-292 22-270 (292)
380 KOG0279 G protein beta subunit 100.0 9.2E-28 2E-32 255.4 29.6 303 1130-1553 6-311 (315)
381 KOG1151 Tousled-like protein k 100.0 2.1E-30 4.6E-35 289.3 10.0 261 26-292 464-741 (775)
382 KOG1094 Discoidin domain recep 100.0 1.8E-29 3.8E-34 291.9 17.0 255 20-294 534-802 (807)
383 KOG0296 Angio-associated migra 100.0 1.3E-27 2.8E-32 262.6 30.7 334 1131-1553 56-396 (399)
384 KOG0608 Warts/lats-like serine 100.0 2.4E-29 5.3E-34 291.6 16.6 254 26-292 630-928 (1034)
385 cd05576 STKc_RPK118_like Catal 100.0 5.5E-29 1.2E-33 284.2 19.4 223 36-292 4-234 (237)
386 KOG0284 Polyadenylation factor 100.0 6.5E-29 1.4E-33 275.5 18.3 282 1137-1552 94-377 (464)
387 KOG1027 Serine/threonine prote 100.0 7.8E-30 1.7E-34 307.9 11.8 247 28-304 512-772 (903)
388 KOG0284 Polyadenylation factor 100.0 3.2E-29 6.9E-34 278.0 15.3 276 1109-1465 107-384 (464)
389 KOG0671 LAMMER dual specificit 100.0 1E-29 2.2E-34 283.7 9.7 241 26-292 90-406 (415)
390 KOG0315 G-protein beta subunit 100.0 3E-27 6.6E-32 247.0 26.9 275 1151-1553 10-286 (311)
391 KOG0282 mRNA splicing factor [ 100.0 1.3E-28 2.9E-33 279.0 17.9 294 1129-1553 204-503 (503)
392 cd00200 WD40 WD40 domain, foun 100.0 8.9E-27 1.9E-31 269.4 33.6 287 1132-1553 2-289 (289)
393 KOG0315 G-protein beta subunit 100.0 4.6E-27 9.9E-32 245.7 27.4 269 1122-1471 22-298 (311)
394 KOG0665 Jun-N-terminal kinase 100.0 3.9E-29 8.4E-34 272.8 10.7 243 26-292 18-310 (369)
395 KOG4257 Focal adhesion tyrosin 100.0 1.2E-28 2.7E-33 285.8 15.4 240 29-293 393-646 (974)
396 KOG4250 TANK binding protein k 100.0 7.7E-29 1.7E-33 295.9 14.1 199 23-242 11-225 (732)
397 KOG0293 WD40 repeat-containing 100.0 1.2E-27 2.6E-32 264.9 22.4 292 1133-1553 218-511 (519)
398 KOG0265 U5 snRNP-specific prot 100.0 8E-27 1.7E-31 250.5 27.9 290 1132-1551 40-334 (338)
399 KOG0199 ACK and related non-re 100.0 1.3E-28 2.7E-33 289.3 15.1 250 25-293 110-369 (1039)
400 KOG0266 WD40 repeat-containing 100.0 8.5E-27 1.8E-31 289.5 31.9 300 1126-1553 145-452 (456)
401 KOG0695 Serine/threonine prote 100.0 1.1E-28 2.5E-33 267.0 12.7 242 26-286 251-504 (593)
402 KOG1006 Mitogen-activated prot 100.0 1.7E-29 3.8E-34 267.6 5.6 247 26-292 65-327 (361)
403 KOG0196 Tyrosine kinase, EPH ( 100.0 1.3E-28 2.9E-33 293.5 13.7 258 16-294 621-889 (996)
404 PLN03225 Serine/threonine-prot 100.0 7.9E-28 1.7E-32 304.7 20.2 252 26-292 133-450 (566)
405 KOG0587 Traf2- and Nck-interac 100.0 9.3E-28 2E-32 291.3 19.7 249 26-292 20-282 (953)
406 KOG4278 Protein tyrosine kinas 100.0 5.2E-28 1.1E-32 279.3 16.5 244 26-294 268-521 (1157)
407 KOG0273 Beta-transducin family 100.0 3.2E-26 6.9E-31 258.4 29.5 284 1140-1552 236-520 (524)
408 KOG0668 Casein kinase II, alph 100.0 1.5E-28 3.3E-33 254.7 9.1 253 17-304 30-327 (338)
409 KOG0263 Transcription initiati 99.9 1.9E-27 4.2E-32 284.9 19.6 211 1131-1377 443-653 (707)
410 KOG1152 Signal transduction se 99.9 1.3E-28 2.8E-33 284.7 8.3 198 26-241 562-769 (772)
411 KOG0670 U4/U6-associated splic 99.9 1.9E-28 4.1E-33 279.7 7.3 242 26-292 433-746 (752)
412 KOG3653 Transforming growth fa 99.9 1.1E-27 2.5E-32 273.1 13.4 251 26-294 211-501 (534)
413 KOG2052 Activin A type IB rece 99.9 8.4E-27 1.8E-31 264.2 18.3 253 26-294 212-501 (513)
414 KOG0664 Nemo-like MAPK-related 99.9 1E-28 2.2E-33 261.3 2.2 249 26-292 54-343 (449)
415 KOG0645 WD40 repeat protein [G 99.9 1.9E-25 4E-30 236.9 26.8 296 1130-1553 5-309 (312)
416 smart00220 S_TKc Serine/Threon 99.9 2.3E-26 5E-31 262.0 21.4 234 37-292 1-241 (244)
417 KOG0291 WD40-repeat-containing 99.9 5.2E-25 1.1E-29 260.0 31.6 346 1130-1553 136-506 (893)
418 KOG0275 Conserved WD40 repeat- 99.9 4.3E-26 9.3E-31 244.6 19.9 293 1137-1553 211-507 (508)
419 KOG0273 Beta-transducin family 99.9 1.4E-25 3E-30 253.3 24.8 286 1137-1553 176-480 (524)
420 KOG0319 WD40-repeat-containing 99.9 1.5E-25 3.3E-30 265.1 26.3 298 1127-1553 311-617 (775)
421 KOG0640 mRNA cleavage stimulat 99.9 2E-25 4.3E-30 239.1 22.7 303 1132-1553 105-424 (430)
422 KOG1025 Epidermal growth facto 99.9 1.2E-26 2.7E-31 277.1 14.8 249 26-294 697-955 (1177)
423 PLN00113 leucine-rich repeat r 99.9 2.2E-26 4.7E-31 315.5 18.2 236 27-296 692-951 (968)
424 KOG0263 Transcription initiati 99.9 1.3E-25 2.9E-30 269.2 22.2 260 1130-1466 369-654 (707)
425 PLN03224 probable serine/threo 99.9 1.7E-25 3.6E-30 276.1 23.6 258 26-292 146-500 (507)
426 KOG0286 G-protein beta subunit 99.9 8.5E-25 1.8E-29 233.9 25.6 260 1124-1459 81-343 (343)
427 KOG1290 Serine/threonine prote 99.9 1.7E-25 3.7E-30 255.6 21.2 135 18-158 71-222 (590)
428 KOG1345 Serine/threonine kinas 99.9 8.5E-27 1.8E-31 247.8 9.2 247 19-289 20-281 (378)
429 KOG0984 Mitogen-activated prot 99.9 3.4E-26 7.4E-31 234.6 12.7 218 26-261 47-274 (282)
430 KOG0291 WD40-repeat-containing 99.9 1.4E-24 3.1E-29 256.4 28.0 276 1131-1469 342-620 (893)
431 KOG0285 Pleiotropic regulator 99.9 7.4E-25 1.6E-29 239.1 21.5 262 1123-1461 176-439 (460)
432 KOG0318 WD40 repeat stress pro 99.9 2.3E-23 4.9E-28 238.0 33.9 368 1129-1553 180-558 (603)
433 KOG0200 Fibroblast/platelet-de 99.9 6.1E-25 1.3E-29 281.2 22.7 248 26-295 297-578 (609)
434 KOG0316 Conserved WD40 repeat- 99.9 4E-24 8.6E-29 221.9 24.1 249 1132-1464 10-260 (307)
435 KOG0645 WD40 repeat protein [G 99.9 7.9E-24 1.7E-28 224.6 23.7 255 1130-1461 51-311 (312)
436 KOG0295 WD40 repeat-containing 99.9 2.8E-24 6.1E-29 236.1 20.9 254 1124-1459 134-404 (406)
437 KOG0313 Microtubule binding pr 99.9 1.3E-23 2.9E-28 231.9 25.6 282 1138-1553 104-416 (423)
438 KOG0281 Beta-TrCP (transducin 99.9 6.4E-25 1.4E-29 238.0 14.6 263 1122-1466 219-482 (499)
439 KOG0643 Translation initiation 99.9 8E-24 1.7E-28 223.7 22.3 296 1134-1552 5-314 (327)
440 KOG0276 Vesicle coat complex C 99.9 9E-24 2E-28 244.6 24.5 250 1133-1463 7-259 (794)
441 KOG0268 Sof1-like rRNA process 99.9 1.8E-24 4E-29 236.9 16.3 283 1131-1553 58-343 (433)
442 KOG0319 WD40-repeat-containing 99.9 3.7E-24 8E-29 253.4 19.8 263 1129-1461 355-619 (775)
443 KOG0266 WD40 repeat-containing 99.9 1.9E-23 4.1E-28 259.6 27.3 262 1124-1461 185-454 (456)
444 cd00180 PKc Catalytic domain o 99.9 1.1E-23 2.5E-28 233.6 22.6 209 33-292 1-214 (215)
445 KOG0576 Mitogen-activated prot 99.9 8.7E-26 1.9E-30 265.8 4.2 248 26-292 16-271 (829)
446 KOG0306 WD40-repeat-containing 99.9 4.1E-23 9E-28 244.0 25.5 282 1133-1553 367-662 (888)
447 KOG0293 WD40 repeat-containing 99.9 2.9E-23 6.3E-28 230.4 22.6 253 1129-1463 259-515 (519)
448 KOG0265 U5 snRNP-specific prot 99.9 3.1E-23 6.6E-28 223.1 21.6 254 1124-1458 73-335 (338)
449 KOG0318 WD40 repeat stress pro 99.9 3.7E-22 8E-27 228.2 30.7 292 1131-1553 51-348 (603)
450 KOG0278 Serine/threonine kinas 99.9 2.9E-23 6.3E-28 217.0 17.9 282 1134-1553 9-295 (334)
451 KOG0274 Cdc4 and related F-box 99.9 1.6E-22 3.5E-27 250.1 26.8 288 1123-1553 190-480 (537)
452 KOG0292 Vesicle coat complex C 99.9 3.9E-22 8.5E-27 238.3 27.3 269 1121-1472 32-332 (1202)
453 KOG1407 WD40 repeat protein [F 99.9 4.8E-22 1E-26 209.9 24.8 284 1133-1552 14-308 (313)
454 KOG0274 Cdc4 and related F-box 99.9 2.3E-22 4.9E-27 248.7 26.1 257 1123-1469 231-490 (537)
455 KOG1167 Serine/threonine prote 99.9 4.2E-24 9.1E-29 242.7 9.8 248 26-292 37-381 (418)
456 KOG0292 Vesicle coat complex C 99.9 3.3E-22 7.2E-27 239.0 25.5 256 1135-1470 5-289 (1202)
457 KOG0288 WD40 repeat protein Ti 99.9 5.3E-23 1.1E-27 229.3 17.3 289 1133-1553 169-459 (459)
458 KOG0277 Peroxisomal targeting 99.9 3.7E-22 8E-27 209.9 22.4 283 1143-1553 12-307 (311)
459 KOG0278 Serine/threonine kinas 99.9 4.2E-23 9.1E-28 215.9 15.3 254 1127-1465 47-301 (334)
460 KOG0316 Conserved WD40 repeat- 99.9 3.1E-22 6.7E-27 208.0 21.0 224 1123-1382 42-266 (307)
461 cd00200 WD40 WD40 domain, foun 99.9 1.7E-21 3.7E-26 225.2 30.0 253 1124-1459 35-289 (289)
462 KOG0313 Microtubule binding pr 99.9 5.3E-22 1.1E-26 219.4 23.6 275 1122-1461 127-418 (423)
463 KOG0296 Angio-associated migra 99.9 7.2E-22 1.6E-26 217.6 24.1 255 1124-1461 90-398 (399)
464 PLN00181 protein SPA1-RELATED; 99.9 1E-21 2.2E-26 262.1 30.8 278 1160-1553 457-736 (793)
465 smart00221 STYKc Protein kinas 99.9 3.2E-22 6.9E-27 225.5 21.0 198 27-243 1-202 (225)
466 KOG0643 Translation initiation 99.9 5.2E-22 1.1E-26 210.1 20.9 288 1108-1461 20-317 (327)
467 KOG1446 Histone H3 (Lys4) meth 99.9 1.6E-20 3.4E-25 204.9 31.6 260 1132-1472 7-273 (311)
468 KOG0973 Histone transcription 99.9 1.7E-21 3.6E-26 241.6 26.4 299 1139-1552 13-352 (942)
469 KOG0282 mRNA splicing factor [ 99.9 1.7E-22 3.7E-27 229.7 15.9 256 1123-1459 240-503 (503)
470 KOG0277 Peroxisomal targeting 99.9 5.6E-22 1.2E-26 208.5 18.5 243 1138-1460 59-308 (311)
471 KOG0300 WD40 repeat-containing 99.9 9.1E-22 2E-26 211.2 20.4 307 1129-1553 138-474 (481)
472 KOG1024 Receptor-like protein 99.9 9.6E-23 2.1E-27 226.5 13.4 247 26-293 285-552 (563)
473 KOG0276 Vesicle coat complex C 99.9 5.2E-22 1.1E-26 230.2 19.9 244 1182-1553 8-255 (794)
474 KOG0289 mRNA splicing factor [ 99.9 3.9E-21 8.5E-26 215.3 25.1 284 1140-1553 220-504 (506)
475 KOG0310 Conserved WD40 repeat- 99.9 3.5E-21 7.5E-26 219.7 24.0 275 1140-1551 27-305 (487)
476 KOG0305 Anaphase promoting com 99.9 6.5E-21 1.4E-25 226.8 27.5 272 1144-1553 182-459 (484)
477 KOG0640 mRNA cleavage stimulat 99.9 1.2E-21 2.5E-26 210.4 18.6 260 1130-1461 163-426 (430)
478 KOG2096 WD40 repeat protein [G 99.9 1.4E-20 3E-25 203.2 25.7 307 1131-1552 78-399 (420)
479 PTZ00421 coronin; Provisional 99.9 1.7E-20 3.8E-25 232.1 30.4 266 1138-1469 19-298 (493)
480 KOG0308 Conserved WD40 repeat- 99.9 1.8E-21 3.9E-26 227.4 20.0 264 1137-1473 19-297 (735)
481 KOG0647 mRNA export protein (c 99.9 9.9E-21 2.1E-25 203.9 24.1 251 1139-1462 27-282 (347)
482 KOG0772 Uncharacterized conser 99.9 6E-21 1.3E-25 217.3 23.1 230 1129-1376 157-397 (641)
483 PTZ00420 coronin; Provisional 99.9 1.7E-20 3.6E-25 232.8 29.2 226 1124-1378 58-298 (568)
484 PTZ00421 coronin; Provisional 99.9 1.8E-20 4E-25 231.9 29.6 220 1134-1382 70-299 (493)
485 KOG0283 WD40 repeat-containing 99.9 3.2E-21 6.9E-26 234.0 21.8 257 1132-1463 259-578 (712)
486 KOG1036 Mitotic spindle checkp 99.9 3.2E-20 7E-25 201.2 26.4 253 1139-1470 13-271 (323)
487 KOG0288 WD40 repeat protein Ti 99.9 2E-21 4.4E-26 216.7 16.8 255 1123-1458 200-458 (459)
488 PTZ00420 coronin; Provisional 99.9 6.8E-20 1.5E-24 227.4 31.0 241 1156-1464 49-296 (568)
489 KOG0300 WD40 repeat-containing 99.9 6.7E-21 1.5E-25 204.6 19.0 268 1122-1464 172-479 (481)
490 KOG4283 Transcription-coupled 99.9 1.5E-20 3.2E-25 201.0 20.2 309 1137-1552 41-362 (397)
491 KOG0305 Anaphase promoting com 99.9 4.5E-20 9.8E-25 219.7 25.9 257 1124-1465 201-465 (484)
492 KOG0289 mRNA splicing factor [ 99.9 4.6E-20 1E-24 206.8 23.9 211 1127-1371 249-460 (506)
493 KOG0641 WD40 repeat protein [G 99.9 9.6E-19 2.1E-23 180.3 31.2 310 1125-1552 19-346 (350)
494 KOG0639 Transducin-like enhanc 99.9 1.7E-20 3.6E-25 212.3 20.0 285 1136-1552 416-701 (705)
495 KOG0294 WD40 repeat-containing 99.9 4.7E-20 1E-24 199.7 22.6 245 1130-1463 34-283 (362)
496 KOG0306 WD40-repeat-containing 99.9 4.7E-20 1E-24 218.4 24.3 268 1122-1462 396-665 (888)
497 KOG0301 Phospholipase A2-activ 99.9 8.6E-20 1.9E-24 215.2 25.9 242 1130-1461 5-249 (745)
498 smart00750 KIND kinase non-cat 99.8 4.4E-21 9.6E-26 208.2 13.8 156 109-294 1-167 (176)
499 KOG0641 WD40 repeat protein [G 99.8 3.2E-19 7E-24 183.7 25.5 259 1130-1461 80-349 (350)
500 KOG0264 Nucleosome remodeling 99.8 9.7E-20 2.1E-24 207.0 22.9 278 1132-1461 117-404 (422)
No 1
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=100.00 E-value=5.3e-220 Score=1973.51 Aligned_cols=1405 Identities=40% Similarity=0.614 Sum_probs=1034.7
Q ss_pred CCCccccCccccccccccccCCCccceEEEEEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHh
Q 000410 1 MGNKIAKTTQASATEYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFR 80 (1553)
Q Consensus 1 Mgn~~s~~~~~~~~~~~~~~l~~~~~y~~~~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~ 80 (1553)
||||++.|+|+.+++.|+.++.. +|.+.+.||+++|.+|++|++++|.|+||||.++++..+++.+.++++++. ..
T Consensus 1 MGnqls~~sQi~~~e~yfsd~~~--e~~~~~~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik--~~ 76 (1431)
T KOG1240|consen 1 MGNQLSLPSQISPVEVYFSDLSV--ECHYVENLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIK--FA 76 (1431)
T ss_pred CCcccccccccchHHHHhhcCcc--ceeeecccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHH--HH
Confidence 99999999999999999999987 788999999999999999999999999999999998999999999998876 56
Q ss_pred cCCCCCeeEEEEEEEeCCEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC
Q 000410 81 SIDHPHVWAFQFWQETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 160 (1553)
Q Consensus 81 ~l~hpnIv~~~~~~~~~~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~ 160 (1553)
.++|||+++|..+.+++++.|||++|+..+|+|+++.||+|...|++||++||+.||..||..||+|||||.|||||++|
T Consensus 77 l~~~pn~lPfqk~~~t~kAAylvRqyvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSW 156 (1431)
T KOG1240|consen 77 LMKAPNCLPFQKVLVTDKAAYLVRQYVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSW 156 (1431)
T ss_pred hhcCCcccchHHHHHhhHHHHHHHHHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeee
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCC-CCCcccHHHHHHHHHHHHcC-C
Q 000410 161 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAP-LKPSMDIFAVGCVIAELFLE-V 238 (1553)
Q Consensus 161 ~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~-~t~~~DIwSlG~il~eLltg-~ 238 (1553)
+|+.|+||..+||+++|+++|++|.++|+|..++.||+|||+|....+..+..+... ++++|||||+||+++||++. +
T Consensus 157 NW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~ 236 (1431)
T KOG1240|consen 157 NWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGR 236 (1431)
T ss_pred chhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999987665444455555 89999999999999999986 9
Q ss_pred CCCCchHHHHHHhc-CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhcccCCCCCCchhhhhhccCCCCC
Q 000410 239 PFFELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFYCCWNPLH 317 (1553)
Q Consensus 239 ~pf~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fP~~f~~fl~~~~~~~~~~~ 317 (1553)
|+|+++++.+|+.+ .+.+...++++.+..+++||..|++.||.+|.+|+++|+++++.+||+|||+|||+|+..+.++.
T Consensus 237 PlF~LSQL~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~yrG~~FP~yFy~FL~~Y~~~~~~~~ 316 (1431)
T KOG1240|consen 237 PLFTLSQLLAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKYRGLVFPEYFYSFLYDYLDRFVPLT 316 (1431)
T ss_pred CcccHHHHHhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhhhccccHHHHHHHHHHHHHhcCCcc
Confidence 99999999999998 55666788999999999999999999999999999999999999999999999999999998877
Q ss_pred CcchhhhhccchHHHHHhhcCCCCCCCCCCCCCCCCcCCchhhHHHHHHHHhHHHHHHHhhHHHHHhhhccccchhcccc
Q 000410 318 SDMRVAMCRSVFPEILKQMMGNKSSEDIGSGVGTPSTAMSVKESQERVTKQNLNLAKALLEKREEMEKGRVQNRFRLLGD 397 (1553)
Q Consensus 318 ~~~r~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (1553)
....+.. .-+.+...++. ++..++-.++ ...|
T Consensus 317 ~~~p~~~----------~~~~gs~i~d~------------~~~~~~p~n~--------------------------~~~~ 348 (1431)
T KOG1240|consen 317 TSTPISD----------NTCTGSTIEDN------------VKLLDGPTNK--------------------------IYRD 348 (1431)
T ss_pred ccCcccc----------ccccCcccccc------------cccccCcccc--------------------------hhhh
Confidence 3322221 11111111111 0000000011 1234
Q ss_pred ccccccCCCCCCccCCCCCCCCCCCCCcccccccCccccccchhhhhhhhhhhcCCCCcccccccccccccccccCCCCC
Q 000410 398 ISTLIGDGKESNQCSNVKPMPEDVPNSTFSQDLRNSSVESSGELLQSISDAFRKNGHPFLKKITMNNLSSLMSEYDSQSD 477 (1553)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 477 (1553)
+..+|+.......+. .+. ..+.++.+..+.+....+.+++.......++-.....|++.++
T Consensus 349 ~~~~~h~ln~~~~~~-----------------~~~--~~S~De~~~~~~~al~~~r~~~~~l~~~~dl~~~~q~~~~~~~ 409 (1431)
T KOG1240|consen 349 FSQICHCLNFPLIKD-----------------GGT--ITSSDEIIDSISKALEFSRHLIENLDVIQDLKPEKQLWTARSS 409 (1431)
T ss_pred hhccccccccccccc-----------------ccc--ccCCcHHHHHHHHHHhhhhhhcccchhhhccchHHhcccccCC
Confidence 444555444221110 000 0122333333333332222233322222222122224444332
Q ss_pred CCCCCCCCCCCCCccccceehhhHHHHhhhcccCCchhHHHHHHHHHHHhccCCcccccccccceeeecccCCCchhHHH
Q 000410 478 TFGMPFLPLPEDSMKCEGIVLIASLLCSCVRNVKLPHYRRAAILLLKSSSLFIDDEDRLQRVLPHVIAMLSDPAAIVRCA 557 (1553)
Q Consensus 478 ~~~~~~~~~~~~~~~~~~~~i~l~~i~s~~R~~~~~~sk~~al~ll~~~s~~~~de~~ldrilPy~~~ll~d~~~~Vr~~ 557 (1553)
.+ ....+++|++||+++||||||+++.+++|++||+||..||+|++||.||||||||+|+|+.|+.+.|||+
T Consensus 410 ~~--------~~~~~~~ga~l~vs~lts~IR~lk~~~tK~~ALeLl~~lS~~i~de~~LDRVlPY~v~l~~Ds~a~Vra~ 481 (1431)
T KOG1240|consen 410 PN--------IKDPKEEGAVLFVSVLTSCIRALKTIQTKLAALELLQELSTYIDDEVKLDRVLPYFVHLLMDSEADVRAT 481 (1431)
T ss_pred cc--------cCCccccceeeeHHHHHHHHHhhhcchhHHHHHHHHHHHhhhcchHHHHhhhHHHHHHHhcCchHHHHHH
Confidence 21 1246789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcccccccCCCCCCccccccccccCCCCCC-CCchhhHHHHhhHHHHHHHHHHHHHHHHHhhhcccccccCCC
Q 000410 558 ALETLCDILPLVRNFPPSDAKIFPEYILPMLSMLPDD-PEESVRICYASNIAKLALTAYGFLVHSIRLSEAGVLDKLSAP 636 (1553)
Q Consensus 558 al~~l~~~l~~v~~~~~~~~~iF~eYilP~l~~l~~d-~~~~vr~~~A~~l~~LA~~a~rfl~~~~~~~~~~~~~~~~~~ 636 (1553)
||+|||++|.+|+.+||+|+|||||||||.|++|+.| ...+||+|||+||+.||.||.||||.+|.++..|.++..+++
T Consensus 482 Al~Tlt~~L~~Vr~~~~~daniF~eYlfP~L~~l~~d~~~~~vRiayAsnla~LA~tA~rFle~~q~~~~~g~~n~~nse 561 (1431)
T KOG1240|consen 482 ALETLTELLALVRDIPPSDANIFPEYLFPHLNHLLNDSSAQIVRIAYASNLAQLAKTAYRFLELTQELRQAGMLNDPNSE 561 (1431)
T ss_pred HHHHHHHHHhhccCCCcccchhhHhhhhhhhHhhhccCccceehhhHHhhHHHHHHHHHHHHHHHHHHHhcccccCcccc
Confidence 9999999999999999999999999999999999999 789999999999999999999999999999988877654321
Q ss_pred CCCCCCCCccchhhhccchHHHHHHHHHHHHHHHHHHhcCCCCChHHHHHHHhcccchhcccCccccccccccccccccc
Q 000410 637 HKSPSSSNETSVQLQRLNADVQLSQLRKSIAEVVQELVMGPKQTPSIRRALLQDIGNLCSFFGQRQSNDFLLPILPAFLN 716 (1553)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~ll~~~~~~~~vk~all~~i~~Lc~FfG~~ktnd~iL~hlit~LN 716 (1553)
+ ..+. ++++++++|++.+++.|++||+ |+++.||||||++|.+||+||||+|+||+||||||||||
T Consensus 562 ---------t-~~~~--~~~~~~~~L~~~V~~~v~sLls--d~~~~Vkr~Lle~i~~LC~FFGk~ksND~iLshLiTfLN 627 (1431)
T KOG1240|consen 562 ---------T-APEQ--NYNTELQALHHTVEQMVSSLLS--DSPPIVKRALLESIIPLCVFFGKEKSNDVILSHLITFLN 627 (1431)
T ss_pred ---------c-cccc--ccchHHHHHHHHHHHHHHHHHc--CCchHHHHHHHHHHHHHHHHhhhcccccchHHHHHHHhc
Confidence 0 1222 3467999999999999999999 467999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHhccceeeeeeccchhhHhHHHHHHhhcCCCchHHHHHHHHHHHHHHHcCCCchHHHHHHHHhhcccccC
Q 000410 717 DRDEQLRAVFYGQIVYVCFFVGERSVEEYLLPYIEQALSDATEAVIVNALDCLAILCKSGYLRKRILLEMIERAFPLLCY 796 (1553)
Q Consensus 717 d~d~~LR~aff~~i~~v~~~vG~~s~e~~ilPll~q~l~D~ee~Vv~~~l~~l~~l~~~gl~~k~~~~~~~~~~~~ll~H 796 (1553)
||||+||+||||+|+|||.||||+|+|+||||||+|||+|+||+||++||+||+.|||+|||+|+++.|++..|+|||||
T Consensus 628 DkDw~LR~aFfdsI~gvsi~VG~rs~seyllPLl~Q~ltD~EE~Viv~aL~~ls~Lik~~ll~K~~v~~i~~~v~PlL~h 707 (1431)
T KOG1240|consen 628 DKDWRLRGAFFDSIVGVSIFVGWRSVSEYLLPLLQQGLTDGEEAVIVSALGSLSILIKLGLLRKPAVKDILQDVLPLLCH 707 (1431)
T ss_pred CccHHHHHHHHhhccceEEEEeeeeHHHHHHHHHHHhccCcchhhHHHHHHHHHHHHHhcccchHHHHHHHHhhhhheeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcHHHHHHHHHHHHHHhhcCCccceeEEEeeccccccccCCCccCCHHHHHhccCCCCcHHHHHHHHHHhh-hchHHHHH
Q 000410 797 PSQWVRRSVVTFIAASSESLGAVDSYVFLAPVIRPFLRRQPASLASVKALLSCLKPPVSREVFYQVLENAR-SSDMLERQ 875 (1553)
Q Consensus 797 Pn~wiR~~~~~~i~~~~~~l~~ad~~c~l~P~~~p~l~~~~~~~~~~~~ll~~l~~p~sr~v~~~~~~~~~-~~~~~~~~ 875 (1553)
||.|||+++++||++++++|+.|||||+|||+|||||+.++.++.+++.|++||||||||+||+++++|.. ...-..-+
T Consensus 708 PN~WIR~~~~~iI~~~~~~ls~advyc~l~P~irpfl~~~v~~i~s~~~LlsclkpPVsRsv~~~l~r~~~ens~f~k~l 787 (1431)
T KOG1240|consen 708 PNLWIRRAVLGIIAAIARQLSAADVYCKLMPLIRPFLERPVIQIESKEVLLSCLKPPVSRSVFNQLLRWSDENSSFWKKL 787 (1431)
T ss_pred chHHHHHHHHHHHHHHHhhhhhhhheEEeehhhHHhhhccHhhhcchHHHHHHhcCCCcHHHHHHHHHHhhcchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999986 22222333
Q ss_pred hhhhcccCCCChhhhhHHhhhcCCCcccccccCCcccCCcCCCCCCCCCCCCCcccCCCcC--------hhhhHhhcccc
Q 000410 876 RKIWYNTSSQSKQQETADLLKRGAEDLSSIKCWPDKQQSSEGHRPAGDTSKQPEFAQSDDN--------DGAKLRTLGSL 947 (1553)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~kl~~~~~~ 947 (1553)
+..|+..+.+++.|..++...+..+...+-.....+ .+..+....-+-.++.++ +.|+..+++.+
T Consensus 788 ~~~~~~s~~~s~d~~~~~~~~k~~g~l~~~e~~~~~-------~~~~~~~~~i~S~~~~e~~e~~l~~k~~~~~~~r~~~ 860 (1431)
T KOG1240|consen 788 LERHYSSSGNSRDEFIKNYSSKRYGFLPFEEGAGSS-------KWSNTGFKKIKSEGKTELVEDKLLEKDIFLIRSRKPK 860 (1431)
T ss_pred HHHhhhccCccchhhhhcchhhhcccCCccccccch-------hhhhhhcceeeccccccccccccchhchhhhcccCCc
Confidence 445555555555554322211111111111111100 011000000011133333 33444444332
Q ss_pred hhccCccccCCCCCCC-ccccccccccccccccCccccCCCCCCCCcccccccccccCCCCCcCcccccccccccCCCCC
Q 000410 948 VYNASSMADIRDPLCP-EKLLFSGFMSQQVSGVNSLRCDKSSEGIPLYSFSMDKRAMGNLPVASDSVLQVNSLGIGSSTM 1026 (1553)
Q Consensus 948 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1026 (1553)
........ ..+...+ +.....++...++...+... .+..++..++..+....++.+.........+.+.+++.+.
T Consensus 861 ~~~s~~~~-l~d~~~~~~~~~~~~v~~~~~n~~~t~~---~P~~~~~~~~~~d~n~~~~~~~~~~~~n~~~~l~~~~~~~ 936 (1431)
T KOG1240|consen 861 SNISNRVL-LDDPAYPRNTNGREGVLTRQVNLVGTII---EPSNIHARVRRKDSNREGNESNMESPQNSKHLLPIGSPNK 936 (1431)
T ss_pred cchhhhhh-hcCcccccccCCceeeeccccccccccc---ccccchhhhhhhhccccCCCccccCCCcchhhccCCCCCc
Confidence 11111110 0111111 11111222222221111111 1222333333333222111111000111111122222111
Q ss_pred CCCccccCCCCC-CCCCCCCC-cccCCcccCCCCCccceeeccCCCCCcccc-ccccccCCCCCCCCccccccccccCCC
Q 000410 1027 PWMDTTNQSFSL-ASSVPPPN-LVSGSFSISNGSKQFYRVVHEPEGRENDQM-ASVNCKFPEMGTSGTAKGSSINVEDAS 1103 (1553)
Q Consensus 1027 ~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1103 (1553)
.|.+ |..... .......+ +.++++.........+.+.+.+.++.+... ..+.+.....+.............+..
T Consensus 937 ~~~~--~~~~~t~~~~~~~vp~~ts~~~~~~t~~~~~~~~~p~~ns~~~~~~~r~~~~~~dL~~~~~~~~~~~ss~~~s~ 1014 (1431)
T KOG1240|consen 937 LNHT--GSPRSTLLLDGNSVPTLTSSSVRVVTNLKPTKPVMPVPNSTANNQVERSLTCLNDLEMLTVSIPKRPSSESISH 1014 (1431)
T ss_pred cccc--CCCcccccccCCccceeeccceeeeeccCCcccccccCCCCcccchhHHHHHHHhhhhhhhhcccccchhhccc
Confidence 1111 110000 00000001 111122111111111122222322222111 111111111111111111111111110
Q ss_pred CCCCCCCCCCcccccCCCCCCcccCccEeeeccccccCeeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCccc-cccccce
Q 000410 1104 SPADLTGLPSFVRTSSIPDSGWRPRGILVAHLQEHCSAVNEIAISHDH-SFFVSASDDSTVKVWDSRKLEKD-ISFRSRL 1181 (1553)
Q Consensus 1104 ~~~~~~g~~~~~~~~~~~~~~W~p~G~lv~~l~~H~~~V~~l~~spd~-~~laSgS~DGtVkIWD~~~~~~~-~~~~~~~ 1181 (1553)
+....+-|.... .+.++.+|+|+|.+|+||+||+.+|+.++.++++ .+|+|||+||||||||+++.++. .+.++++
T Consensus 1015 -p~~~~~ep~~~~-~~~p~~gW~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~l 1092 (1431)
T KOG1240|consen 1015 -PCLLNSEPSAWS-VGSPPPGWNPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSEL 1092 (1431)
T ss_pred -hhhhccCCchhh-cCCCCCCCCccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeE
Confidence 000111111111 1355778999999999999999999999998766 89999999999999999998866 7889999
Q ss_pred eeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceec-ccCCCcEEEEEEecCCCCcceE
Q 000410 1182 TYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKK-DTKEGAIVTLVNYNTDNCASHM 1260 (1553)
Q Consensus 1182 ~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~s~~~ 1260 (1553)
+|...++++.++.++++++.+|+|+.||.|++.+++... ..++... ..+.. ....|..|.+.+|.....+ ..
T Consensus 1093 tys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~~-----~~~~~~~-~~ri~n~~~~g~vv~m~a~~~~~~S-~~ 1165 (1431)
T KOG1240|consen 1093 TYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHYN-----VSKRVAT-QVRIPNLKKDGVVVSMHAFTAIVQS-HV 1165 (1431)
T ss_pred EEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEccccc-----cccceee-eeecccccCCCceEEeecccccccc-ee
Confidence 999888899999999999999999999999999998421 1222222 22332 3345678888888877543 59
Q ss_pred EEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEE
Q 000410 1261 FMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMC 1340 (1553)
Q Consensus 1261 l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~ 1340 (1553)
++++|..+.|..||+|+...+|+++++..+|.|++++.||.++|++.||+.|.+.+||+||+.++.+|.+++..+|+++.
T Consensus 1166 lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~ 1245 (1431)
T KOG1240|consen 1166 LVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVW 1245 (1431)
T ss_pred EEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred eecCCCCCccccCCCCEEEEEE-cCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccccccc
Q 000410 1341 LFVPPPNAAVSTTARPLIYVAA-GCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQK 1419 (1553)
Q Consensus 1341 ~~~p~~~~~~~s~~~~~l~s~s-~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 1419 (1553)
. +|.... ....+.+++ +.++|.+|++++|.|..+++.++. .+ .+.+. .|...
T Consensus 1246 ~-~~~~~~-----~S~~vs~~~~~~nevs~wn~~~g~~~~vl~~s~~--~p---~ls~~--~Ps~~-------------- 1298 (1431)
T KOG1240|consen 1246 L-CPTYPQ-----ESVSVSAGSSSNNEVSTWNMETGLRQTVLWASDG--AP---ILSYA--LPSND-------------- 1298 (1431)
T ss_pred e-eccCCC-----CceEEEecccCCCceeeeecccCcceEEEEcCCC--Cc---chhhh--ccccc--------------
Confidence 8 554320 122344444 688999999999999999997733 11 11111 11110
Q ss_pred ccccccCCCCCCccCcEEeccCCCCeEEEccCCCeEEEEeCCCCCCc-eEEeCCCCCCCCCCccEEEeecCCeEEEEeee
Q 000410 1420 YRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRS-YCICGPNLKGVGNDEFYETRSSSGVQVVQERK 1498 (1553)
Q Consensus 1420 ~~~~~l~~~~~~~~~V~sl~~sp~g~llTgg~Dg~IrlWDl~~~~~s-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~ 1498 (1553)
...++...++.|....+++.++|||+|++||.||...++.+ +.+.|+.........+|..+...|.++++|..
T Consensus 1299 ------~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s~~~~~~~~s~~~~~i~~~~~i~e~i 1372 (1431)
T KOG1240|consen 1299 ------ARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPSTSYSTNSESYDLSTIPGSQFIDEFI 1372 (1431)
T ss_pred ------CCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCccccccccchhccccccCCCccchhhh
Confidence 00123344677777778889999999999999999999998 77777766555667789999999999999865
Q ss_pred cCCcchhhh----HHHHHhhhhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1499 RQPLTSKLT----AKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1499 ~~~~~~~~~----~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
..+.+...+ .....+........+|+|.|+|++.+..++.+||++|+||+|||||
T Consensus 1373 ~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~IkiWk 1431 (1431)
T KOG1240|consen 1373 IYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVIKIWK 1431 (1431)
T ss_pred hhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCeeeecC
Confidence 444322222 1112222234456789999999988888899999999999999997
No 2
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=7.8e-43 Score=464.10 Aligned_cols=308 Identities=14% Similarity=0.184 Sum_probs=222.8
Q ss_pred eccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccc-cc-ccceeeecCCCceEEEEEec-CCcEEEEEeCCCc
Q 000410 1134 HLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDI-SF-RSRLTYHLEGSRALCTMMLR-HSAQVVVGACDGI 1210 (1553)
Q Consensus 1134 ~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~-~~-~~~~~~~~h~~~I~~l~f~~-~~~~las~s~DG~ 1210 (1553)
.+..|.+.|++++|+|++++|||||.||+|+|||........ .. ....... +...+.+++|++ +++.|++|+.||+
T Consensus 478 ~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~ 556 (793)
T PLN00181 478 DLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGV 556 (793)
T ss_pred cccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCe
Confidence 455699999999999999999999999999999986432110 00 1122233 345699999987 4789999999999
Q ss_pred EEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCC
Q 000410 1211 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEE 1290 (1553)
Q Consensus 1211 I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~ 1290 (1553)
|++||+.+. ........|...|.+++|+|.. +.+|++|+.||.|++||++++.++.++.. .
T Consensus 557 v~lWd~~~~--------------~~~~~~~~H~~~V~~l~~~p~~--~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~---~ 617 (793)
T PLN00181 557 VQVWDVARS--------------QLVTEMKEHEKRVWSIDYSSAD--PTLLASGSDDGSVKLWSINQGVSIGTIKT---K 617 (793)
T ss_pred EEEEECCCC--------------eEEEEecCCCCCEEEEEEcCCC--CCEEEEEcCCCEEEEEECCCCcEEEEEec---C
Confidence 999999631 1112223567789999999742 56999999999999999999988887764 4
Q ss_pred cceEEEEEc-CCCCEEEEEeCCCcEEEEeCCCCc-ccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEE
Q 000410 1291 GYVSSLVTG-PCGNWFVSGSSRGVLTLWDLRFLV-PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1368 (1553)
Q Consensus 1291 g~Itsl~~s-p~g~~LvsGs~dG~l~lWDlr~~~-~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~ 1368 (1553)
..|.+++|+ ++|.+|++|+.||.|++||++... ++..+. .|...|..+.| . ++.++++++.|+.|+
T Consensus 618 ~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~-~h~~~V~~v~f-~----------~~~~lvs~s~D~~ik 685 (793)
T PLN00181 618 ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMI-GHSKTVSYVRF-V----------DSSTLVSSSTDNTLK 685 (793)
T ss_pred CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEec-CCCCCEEEEEE-e----------CCCEEEEEECCCEEE
Confidence 679999995 578999999999999999999765 344444 46678888887 2 235799999999999
Q ss_pred EEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEE
Q 000410 1369 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL 1447 (1553)
Q Consensus 1369 vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~ll 1447 (1553)
+||+.++... . .. ..+....+|...+.++.|++++ .|+
T Consensus 686 iWd~~~~~~~-------~-~~---------------------------------~~l~~~~gh~~~i~~v~~s~~~~~la 724 (793)
T PLN00181 686 LWDLSMSISG-------I-NE---------------------------------TPLHSFMGHTNVKNFVGLSVSDGYIA 724 (793)
T ss_pred EEeCCCCccc-------c-CC---------------------------------cceEEEcCCCCCeeEEEEcCCCCEEE
Confidence 9999754200 0 00 0000112344467889999877 677
Q ss_pred EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccce
Q 000410 1448 TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSI 1527 (1553)
Q Consensus 1448 Tgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I 1527 (1553)
+|+.|+.|++|+...+............ .+. ......|.+.|
T Consensus 725 sgs~D~~v~iw~~~~~~~~~s~~~~~~~-----------------~~~---------------------~~~~~~~~~~V 766 (793)
T PLN00181 725 TGSETNEVFVYHKAFPMPVLSYKFKTID-----------------PVS---------------------GLEVDDASQFI 766 (793)
T ss_pred EEeCCCEEEEEECCCCCceEEEecccCC-----------------ccc---------------------ccccCCCCcEE
Confidence 9999999999998755332211110000 000 00112367889
Q ss_pred eEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1528 LSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1528 ~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.++ +|++++.+|++|+.||.|+||+
T Consensus 767 ~~v-~ws~~~~~lva~~~dG~I~i~~ 791 (793)
T PLN00181 767 SSV-CWRGQSSTLVAANSTGNIKILE 791 (793)
T ss_pred EEE-EEcCCCCeEEEecCCCcEEEEe
Confidence 999 7999999999999999999995
No 3
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.2e-46 Score=414.54 Aligned_cols=252 Identities=26% Similarity=0.299 Sum_probs=216.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCH--HHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDL--REYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~--~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
.|.+.+.||+|+||.|-+|..+. +.||||++.++...... ..-...+++|+++|++++|||||+++++|+.++..|
T Consensus 173 ~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~Y 252 (475)
T KOG0615|consen 173 YYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSSY 252 (475)
T ss_pred eeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCceE
Confidence 58899999999999999998764 67999999987322111 122334679999999999999999999999999999
Q ss_pred EEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC---CcEEEeecCccccccCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW---NWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~---~~vkL~DFG~a~~~~~~ 177 (1553)
|||||++ |+|.+++-.++.+.+..-+.+++||+.||.|||++||+||||||||||++.+ -.+||+|||+||...
T Consensus 253 mVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g-- 330 (475)
T KOG0615|consen 253 MVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSG-- 330 (475)
T ss_pred EEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccc--
Confidence 9999999 6999999999999999999999999999999999999999999999999876 579999999999762
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch-----HHHHHHhc
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS-----HLLAYRRG 252 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~-----~~~~~~~~ 252 (1553)
...+..|.||||.|.|||++...+.+ .+..++|||||||+||-+++|.|||..+ -..++.+|
T Consensus 331 ------~~sfm~TlCGTpsYvAPEVl~~kg~~-------~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G 397 (475)
T KOG0615|consen 331 ------EGSFMKTLCGTPSYVAPEVLASKGVE-------YYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKG 397 (475)
T ss_pred ------cceehhhhcCCccccChhheecCCee-------cccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcC
Confidence 23467899999999999999755432 3446999999999999999999999643 24567788
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.|...+......+++.++||.+||..||++|||++|+|+|
T Consensus 398 ~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 398 RYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred cccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 8886654555556789999999999999999999999999
No 4
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.9e-43 Score=412.93 Aligned_cols=249 Identities=21% Similarity=0.267 Sum_probs=215.0
Q ss_pred cceEEEEEeeccCcEEEEEEEE-C-CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKH-D-EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~-~-~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
-+|+..+.||+|+|+++|.+++ . +..||+|++.+.. .......+++.+|+++.+.|+|||||+++++|++.+.+||
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~--l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYi 95 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKL--LKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYI 95 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHH--hcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEE
Confidence 4799999999999999999998 3 4679999998752 1223455678899999999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|.|+|. ++|..+++.++.++|.|++.+++||+.||.|||++||+|||||..|+|++++.+|||+|||+|.....+..
T Consensus 96 vLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~E-- 173 (592)
T KOG0575|consen 96 VLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGE-- 173 (592)
T ss_pred EEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCccc--
Confidence 999999 79999999999999999999999999999999999999999999999999999999999999987743322
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~ 261 (1553)
...|.||||.|+|||++. ....+..+||||+|||||.|+.|+|||+...+....+........+|
T Consensus 174 -----rk~TlCGTPNYIAPEVl~----------k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P 238 (592)
T KOG0575|consen 174 -----RKKTLCGTPNYIAPEVLN----------KSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMP 238 (592)
T ss_pred -----ccceecCCCcccChhHhc----------cCCCCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCcccc
Confidence 224778999999999875 34568899999999999999999999997766544333333333355
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+.++++||.+||+.||.+|||++++|.|
T Consensus 239 ~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 239 SHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred cccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 5667899999999999999999999999998
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=6.6e-42 Score=382.40 Aligned_cols=244 Identities=21% Similarity=0.198 Sum_probs=212.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-EEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK-AAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~-~~~l 102 (1553)
+++..+.||+|..|+||+|+|+. ..+|+|++... ......+++.+|.++++.++|||||++|+.|..+. ..+|
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~----~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI 155 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLN----IDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISI 155 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeeccc----CCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEe
Confidence 67788999999999999999974 56999999443 33567788999999999999999999999999988 5999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+||||+ |+|.+.+..-+.+++...-.|+.++++||.|||+ ++|+||||||+||||++.|.|||||||.++.....
T Consensus 156 ~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS--- 232 (364)
T KOG0581|consen 156 CMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS--- 232 (364)
T ss_pred ehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh---
Confidence 999999 6999999988889999999999999999999996 99999999999999999999999999999866221
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch-----HHHHHHhc-CC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS-----HLLAYRRG-QY 254 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~-----~~~~~~~~-~~ 254 (1553)
...+..||..|||||++. +..|+.++||||||+++.|+++|+.||... ....+... ..
T Consensus 233 ------~a~tfvGT~~YMsPERi~----------g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~ 296 (364)
T KOG0581|consen 233 ------IANTFVGTSAYMSPERIS----------GESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD 296 (364)
T ss_pred ------hcccccccccccChhhhc----------CCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc
Confidence 446778999999999885 457888999999999999999999888763 33333333 33
Q ss_pred CCCCCCCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 DPSQHLEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ~~~~~~~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+.+.++. ..++++++||..||++||.+||++.|+++|
T Consensus 297 ~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 297 EPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred CCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 35555666 488999999999999999999999999998
No 6
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-42 Score=395.90 Aligned_cols=258 Identities=20% Similarity=0.287 Sum_probs=214.6
Q ss_pred CccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCE
Q 000410 23 SSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 23 ~~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~ 99 (1553)
...||.+++.||.|+|++|++|+... +.|||||+.|+. .-.+.-.+.+.+|.++|.+| .||.|++++..|+++..
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~--Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRY--IIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHH--HHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 33489999999999999999998864 679999998762 12222334577888899999 89999999999999999
Q ss_pred EEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
+|+|+||++ |+|.++|.+-+.|++...+.++.||+.||+|||++|||||||||||||++++|++||+|||.|+......
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~ 228 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQ 228 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhh
Confidence 999999999 8999999999999999999999999999999999999999999999999999999999999998764332
Q ss_pred CC---CCCc---ceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhc
Q 000410 179 DD---PSDF---SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRG 252 (1553)
Q Consensus 179 ~~---~~~~---~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~ 252 (1553)
.. +... .....+..||..|.+||++. ....++.+|||+||||||+|+.|.|||...+...+.+.
T Consensus 229 ~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~----------~~~~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqk 298 (604)
T KOG0592|consen 229 KSQENPVDPNQASSRRSSFVGTAEYVSPELLN----------DSPAGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQK 298 (604)
T ss_pred ccccCccCcccccCcccceeeeecccCHHHhc----------CCCCCcccchHHHHHHHHHHhcCCCCCccccHHHHHHH
Confidence 22 1111 11123467899999999775 45778999999999999999999999987765444433
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.......++...++.+++||.++|..||.+|+|++||.+|
T Consensus 299 I~~l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 299 IQALDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred HHHhcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 3333333555556899999999999999999999999998
No 7
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-41 Score=379.87 Aligned_cols=248 Identities=20% Similarity=0.262 Sum_probs=214.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++++.||+|+||+||.++.++ +.+|+|++.|.... .....+....|+.+|..++||.||+++..|++...+|+|
T Consensus 26 dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv--~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 26 DFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIV--EKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred heeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhh--hhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 89999999999999999999875 56999999887322 223456788999999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||+. |.|+-.|.+.+.+++..++.++..|+.||.|||++||+||||||||||++.+|+++|+|||+++......+
T Consensus 104 ld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~--- 180 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD--- 180 (357)
T ss_pred EeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCC---
Confidence 99999 59999999999999999999999999999999999999999999999999999999999999985532222
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCC-CCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPS-QHLE 261 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~-~~~~ 261 (1553)
...+.+||+.|||||++. +..|+.++|.||||+++|||++|.|||...+..++.+...... ...+
T Consensus 181 ----~t~tfcGT~eYmAPEil~----------~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p 246 (357)
T KOG0598|consen 181 ----ATRTFCGTPEYMAPEILL----------GKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPP 246 (357)
T ss_pred ----ccccccCCccccChHHHh----------cCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCC
Confidence 224578999999999876 4478899999999999999999999999888766655544433 5566
Q ss_pred CCCCHHHHHHHHHhcccCcCCCC----CHHHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRF----SAESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rp----sa~elL~~ 292 (1553)
...+.+.+++|.++|..||++|. .++++-+|
T Consensus 247 ~~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~H 281 (357)
T KOG0598|consen 247 GYLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRH 281 (357)
T ss_pred ccCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcC
Confidence 66788999999999999999996 56666665
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-41 Score=377.94 Aligned_cols=247 Identities=19% Similarity=0.263 Sum_probs=212.2
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
++|.+.+.||+|+|+.||+|+|+. ..||||.+.+..- ..+..+.+..|+.+|+.++|||||++++++++++.+||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l---~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~l 86 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL---NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYL 86 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc---CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEE
Confidence 389999999999999999999975 5699999977521 34566778899999999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC------CcEEEeecCcccccc
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW------NWLYLSDFASFKPTY 175 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~------~~vkL~DFG~a~~~~ 175 (1553)
|||||. |+|.++|..++.+++..++.++.||+.||++||+++||||||||+|||++.. -.+||+|||+|+...
T Consensus 87 VMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~ 166 (429)
T KOG0595|consen 87 VMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQ 166 (429)
T ss_pred EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCC
Confidence 999999 7999999999999999999999999999999999999999999999999875 358999999998763
Q ss_pred CCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHH---hc
Q 000410 176 IPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYR---RG 252 (1553)
Q Consensus 176 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~---~~ 252 (1553)
...+..+.+|++.|||||++. ...|+.|+|+||+|+|+|+|++|++||+.....++. +.
T Consensus 167 --------~~~~a~tlcGSplYMAPEV~~----------~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k 228 (429)
T KOG0595|consen 167 --------PGSMAETLCGSPLYMAPEVIM----------SQQYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKK 228 (429)
T ss_pred --------chhHHHHhhCCccccCHHHHH----------hccccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc
Confidence 233457889999999999774 457899999999999999999999999866554433 22
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.....+.++...+..+.+|+...|..+|..|.+..+.+.|
T Consensus 229 ~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~ 268 (429)
T KOG0595|consen 229 GNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDH 268 (429)
T ss_pred cccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhh
Confidence 2223344555556678899999999999999999988776
No 9
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.2e-42 Score=371.47 Aligned_cols=255 Identities=23% Similarity=0.369 Sum_probs=207.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|+.+.++|+|+||.||+|++++ +.||||.|... .+....++.-.+|+++|++++|||+|.++++|...+.++||
T Consensus 3 kYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Es---edd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLV 79 (396)
T KOG0593|consen 3 KYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVES---EDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLV 79 (396)
T ss_pred HHhhhhccccCcceEEEEeccCCcccEEEEEeeccC---CccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEE
Confidence 57788899999999999999975 56999999654 34456667778899999999999999999999999999999
Q ss_pred eccccCCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+|||+.++.+-+...+ .++...++.|++|++.|+.|||+++++|||||||||||+.+|.+||||||+|+....|.+.-
T Consensus 80 FE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~Y- 158 (396)
T KOG0593|consen 80 FEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNY- 158 (396)
T ss_pred eeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchh-
Confidence 9999988877776644 48999999999999999999999999999999999999999999999999999775444432
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch----HHHHHHh--cC---
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS----HLLAYRR--GQ--- 253 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~----~~~~~~~--~~--- 253 (1553)
+....|.||+|||.+.+ ..+|++.+||||+||++.||++|.|.|.+. ++..++. |.
T Consensus 159 ------TDYVATRWYRaPELLvG---------DtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~p 223 (396)
T KOG0593|consen 159 ------TDYVATRWYRAPELLVG---------DTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIP 223 (396)
T ss_pred ------hhhhhhhhccChhhhcc---------cCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCH
Confidence 23345889999998853 458999999999999999999999999753 2322221 11
Q ss_pred -----CC----------CCC--------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhcccCCCCCCchhh
Q 000410 254 -----YD----------PSQ--------HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLH 307 (1553)
Q Consensus 254 -----~~----------~~~--------~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fP~~f~~fl~ 307 (1553)
+. |.+ .++++ +.-+.+|+++||+.||++|++.+|+|.| +||..|..
T Consensus 224 rhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~-s~~~ld~~k~cL~~dP~~R~sc~qll~H-------~yFd~~~e 292 (396)
T KOG0593|consen 224 RHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKI-SNVLLDLLKKCLKMDPDDRLSCEQLLHH-------PYFDGFIE 292 (396)
T ss_pred HHHHHhccCCceeeeecCCCCCccchhhhcccc-hHHHHHHHHHHhcCCccccccHHHHhcC-------hHHHHHHH
Confidence 00 110 11112 3467899999999999999999999998 67755443
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-41 Score=362.18 Aligned_cols=250 Identities=19% Similarity=0.240 Sum_probs=206.3
Q ss_pred ccceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEE-EE-EeCCE
Q 000410 24 SYNLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQF-WQ-ETDKA 99 (1553)
Q Consensus 24 ~~~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~-~~-~~~~~ 99 (1553)
.-+|++++.||+|.||.||++.+. +..+|.|.+.-. .-.....+.+..|+.+|++|+||||++|++ .+ ++...
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~---~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~ev 94 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFG---MMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEV 94 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchh---hccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchh
Confidence 337999999999999999999884 456999987532 122445667889999999999999999988 33 44455
Q ss_pred EEEEecccc-CCHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHH--CC--CeecCCCCCcEEEecCCcEEEeecCc
Q 000410 100 AYLLRQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHE--KG--ICHGDIKCENVLVTSWNWLYLSDFAS 170 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~--~g--IvHrDIKp~NILv~~~~~vkL~DFG~ 170 (1553)
++||||||. |+|.+.|+ .+..+++..++.++.|++.||.+||+ .. |+||||||.||+++.+|.|||+|||+
T Consensus 95 lnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL 174 (375)
T KOG0591|consen 95 LNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGL 174 (375)
T ss_pred hHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchh
Confidence 999999999 89999884 35569999999999999999999999 55 99999999999999999999999999
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHH
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYR 250 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~ 250 (1553)
++.... ...+..+..|||+||+||++. ..+|++++||||+||++|||+.-++||.+.++..+.
T Consensus 175 ~r~l~s-------~~tfA~S~VGTPyYMSPE~i~----------~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~ 237 (375)
T KOG0591|consen 175 GRFLSS-------KTTFAHSLVGTPYYMSPERIH----------ESGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLC 237 (375)
T ss_pred HhHhcc-------hhHHHHhhcCCCcccCHHHHh----------cCCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHH
Confidence 986621 122345678999999999876 457899999999999999999999999988876654
Q ss_pred h----cCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 251 R----GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 251 ~----~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
+ +.+.+ .+..+.+.+++.||..|+..||+.||+.-.++.+...
T Consensus 238 ~KI~qgd~~~--~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~~ 284 (375)
T KOG0591|consen 238 KKIEQGDYPP--LPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQS 284 (375)
T ss_pred HHHHcCCCCC--CcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHHH
Confidence 4 43332 2335678899999999999999999997777776543
No 11
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-40 Score=388.02 Aligned_cols=244 Identities=23% Similarity=0.289 Sum_probs=214.7
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
-|++++.||.|+-|.|-+|+|. ++.+|||++.+.... .+.....+++|+-+|+.+.||||+++|+++++..++|+|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~--s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylv 90 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSEL--SSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLV 90 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeecccccc--ccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEE
Confidence 5999999999999999999995 467999999887322 223345688888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
.||++ |.|++++-.++.+++.++..+++||+.|+.|||..+|||||+||||+|++..+.+||+|||+|..-
T Consensus 91 lEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe-------- 162 (786)
T KOG0588|consen 91 LEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLE-------- 162 (786)
T ss_pred EEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecc--------
Confidence 99999 799999999999999999999999999999999999999999999999999999999999998643
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~ 258 (1553)
.......|.||+|+|.|||++.+..|+ +.++||||.|+|||.|++|+.||+.+++.. .++|.|.
T Consensus 163 ~~gklLeTSCGSPHYA~PEIV~G~pYd---------G~~sDVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~--- 230 (786)
T KOG0588|consen 163 VPGKLLETSCGSPHYAAPEIVSGRPYD---------GRPSDVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFE--- 230 (786)
T ss_pred cCCccccccCCCcccCCchhhcCCCCC---------CCccccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCccc---
Confidence 123356899999999999998866554 679999999999999999999999877544 4566665
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
++...+.++++||.+||..||++|.|.+|+++|
T Consensus 231 -MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 231 -MPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred -CCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 445556899999999999999999999999999
No 12
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5e-41 Score=381.97 Aligned_cols=245 Identities=21% Similarity=0.341 Sum_probs=200.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCC-EEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDK-AAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~-~~~ 101 (1553)
+|++.++||.|.||.||+|+..+ +.||||.++++ ....++.. =.+|+..|++++ ||||+++.+++.+.+ .+|
T Consensus 11 RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~K--f~s~ee~~--nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 11 RYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKK--FYSWEECM--NLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred HHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhh--hccHHHHH--HHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 78999999999999999998864 67999999776 22333322 246778999998 999999999997776 999
Q ss_pred EEeccccCCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+|||||+.+||++++.|+ .+++..++.|++||++||+|+|.+|+.|||+|||||||.....+||+|||+|+.+....
T Consensus 87 fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Skp-- 164 (538)
T KOG0661|consen 87 FVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKP-- 164 (538)
T ss_pred eeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCC--
Confidence 999999999999998875 49999999999999999999999999999999999999988999999999999874322
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch----HHHHHHhcC---
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS----HLLAYRRGQ--- 253 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~----~~~~~~~~~--- 253 (1553)
.+ +...-|.||+|||++.. ...|+.++||||+|||++|+++-+|.|.+. ++.++....
T Consensus 165 --PY----TeYVSTRWYRAPEvLLr---------s~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP 229 (538)
T KOG0661|consen 165 --PY----TEYVSTRWYRAPEVLLR---------SGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTP 229 (538)
T ss_pred --Cc----chhhhcccccchHHhhh---------ccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCC
Confidence 12 23345788999999853 457999999999999999999999999753 333332211
Q ss_pred ----------------CCC-------CC-CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 ----------------YDP-------SQ-HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ----------------~~~-------~~-~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.. .. .++. .+.++.+||.+||.+||++||||+|+|+|
T Consensus 230 ~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~-~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 230 DKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPN-ASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred ccccchhHHHHHHHhccCCCcCCCCChHHhCcc-cCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 110 00 1122 45789999999999999999999999998
No 13
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=4.3e-40 Score=377.75 Aligned_cols=247 Identities=19% Similarity=0.273 Sum_probs=220.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+.+.||+|.||.||+|+.+. +.||+|.+.|.+. .+...+.+.+|+++++.++||||+.++++|++..++++|
T Consensus 3 ~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr---~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vV 79 (808)
T KOG0597|consen 3 QYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGR---NEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVV 79 (808)
T ss_pred chhHHHHhcCCccceeeecccccceeEEEEEEehhcCC---chHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEE
Confidence 67888999999999999999876 5699999988743 244556788999999999999999999999999999999
Q ss_pred eccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCC
Q 000410 104 RQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSD 183 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~ 183 (1553)
.|||.|+|..++...+.++++.++.|+.|++.||.|||+++|+|||+||.|||+...|.+|+||||+|+... .
T Consensus 80 te~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~-------~ 152 (808)
T KOG0597|consen 80 TEYAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMS-------T 152 (808)
T ss_pred ehhhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcc-------c
Confidence 999999999999999999999999999999999999999999999999999999999999999999998652 2
Q ss_pred cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCC
Q 000410 184 FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKI 263 (1553)
Q Consensus 184 ~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~ 263 (1553)
.........|||.|||||.+. +++|+..+|+|||||++|||++|+|||-...+..+.+.+...+..++..
T Consensus 153 ~t~vltsikGtPlYmAPElv~----------e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~~ 222 (808)
T KOG0597|consen 153 NTSVLTSIKGTPLYMAPELVE----------EQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPST 222 (808)
T ss_pred CceeeeeccCcccccCHHHHc----------CCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCccc
Confidence 344556778999999999654 6688999999999999999999999998888877766666555556666
Q ss_pred CCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 264 PDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 264 ~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+..+++|+..+|.+||.+|.+..+++.|
T Consensus 223 ~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 223 ASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred ccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 67899999999999999999999999998
No 14
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.5e-40 Score=375.09 Aligned_cols=249 Identities=22% Similarity=0.308 Sum_probs=202.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--CEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD--KAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~--~~~~ 101 (1553)
.|+.+++||+|.||.||+|++.. ..||+|.+..... .+.+.....+|+.+|++|+||||+++.+...+. ..+|
T Consensus 118 ~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~---~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siY 194 (560)
T KOG0600|consen 118 SFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNE---KEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIY 194 (560)
T ss_pred HHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccC---CCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEE
Confidence 57778899999999999999864 5699999876532 233445567888999999999999999988766 6899
Q ss_pred EEeccccCCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
||+|||+.+|..++...+ .+++.+++.|++||+.||+|||++||+|||||..||||+.+|.+||+|||+|+.+......
T Consensus 195 lVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~ 274 (560)
T KOG0600|consen 195 LVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSA 274 (560)
T ss_pred EEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCc
Confidence 999999999999998753 5999999999999999999999999999999999999999999999999999866332221
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHHHHhc-CCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRRG-QYD 255 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~~~~~-~~~ 255 (1553)
.+.....|.+|+|||++.+. ..|+.++|+||+||||.||++|+|.|.+.+ +..+.+- ...
T Consensus 275 ------~~T~rVvTLWYRpPELLLG~---------t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP 339 (560)
T KOG0600|consen 275 ------PYTSRVVTLWYRPPELLLGA---------TSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSP 339 (560)
T ss_pred ------ccccceEEeeccChHHhcCC---------cccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCC
Confidence 13455679999999998753 479999999999999999999999997653 3322211 000
Q ss_pred CCCCCC------------------------CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 256 PSQHLE------------------------KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 256 ~~~~~~------------------------~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
....|+ ...+....+|+..||..||.+|.||.++|++
T Consensus 340 ~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~s 400 (560)
T KOG0600|consen 340 TEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQS 400 (560)
T ss_pred ChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhcC
Confidence 000111 1235678899999999999999999999987
No 15
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=2.8e-39 Score=343.11 Aligned_cols=248 Identities=23% Similarity=0.271 Sum_probs=203.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|...++||+|.||.||+|++.. +.||||.+...... +.......+|++.|+.++||||+.++++|...+.+-||
T Consensus 3 rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~k---dGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lV 79 (318)
T KOG0659|consen 3 RYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAK---DGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLV 79 (318)
T ss_pred hhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccc---cCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEE
Confidence 68889999999999999999864 66999999765221 22344566888999999999999999999999999999
Q ss_pred eccccCCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||++.+|+..|+.+. .++..++++++.|+++||+|||++.|+||||||.|+||+++|.+||+|||+++....+....
T Consensus 80 fEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~- 158 (318)
T KOG0659|consen 80 FEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQ- 158 (318)
T ss_pred EEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCccc-
Confidence 9999999999998754 59999999999999999999999999999999999999999999999999999875543321
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHHHHh-------
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRR------- 251 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~~~~------- 251 (1553)
....-|.+|+|||.+.+. ..|+..+||||.|||++||+.|.|.|.+.. +..+.+
T Consensus 159 ------~~~V~TRWYRAPELLfGs---------r~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~ 223 (318)
T KOG0659|consen 159 ------THQVVTRWYRAPELLFGS---------RQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTP 223 (318)
T ss_pred ------ccceeeeeccChHHhccc---------hhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCc
Confidence 122458899999998753 478999999999999999999999996542 222111
Q ss_pred --------------cCCCCCC---CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 --------------GQYDPSQ---HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 --------------~~~~~~~---~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
-.+.+.+ .+....++++.+|+.+||..||.+|++|.|+|+|
T Consensus 224 ~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 224 DQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 1111111 1122224577999999999999999999999998
No 16
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.8e-39 Score=382.38 Aligned_cols=251 Identities=23% Similarity=0.256 Sum_probs=211.8
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCC-cCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCCEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDY-IDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~-~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~~~~ 101 (1553)
.|.+++.||+|.||+|++|.+. +..||+|++.+.... .. ....+.+.+|+.+++.+. ||||+++++++.+...+|
T Consensus 18 ~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~-~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ 96 (370)
T KOG0583|consen 18 KYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKS-QKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIY 96 (370)
T ss_pred ceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccc-cccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEE
Confidence 7999999999999999999885 467999977664211 12 244556778889999998 999999999999999999
Q ss_pred EEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC-CcEEEeecCccccccCCCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW-NWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~-~~vkL~DFG~a~~~~~~~~ 179 (1553)
+|||||. |+|++++..++++.+.+++.+++||+.|++|||++||+||||||||||++.+ +.+||+|||++....
T Consensus 97 ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~---- 172 (370)
T KOG0583|consen 97 IVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISP---- 172 (370)
T ss_pred EEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccC----
Confidence 9999999 5999999998899999999999999999999999999999999999999999 999999999987542
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQH 259 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~ 259 (1553)
.......+.+|++.|+|||+|.+.. ..-+.++||||+|++||.|++|..||+..+..............
T Consensus 173 ---~~~~~l~t~cGsp~Y~aPEvl~~~~--------~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~ 241 (370)
T KOG0583|consen 173 ---GEDGLLKTFCGSPAYAAPEVLSGKG--------TYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFK 241 (370)
T ss_pred ---CCCCcccCCCCCcccCCHHHhCCCC--------CcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCcc
Confidence 1123457889999999999986433 02258999999999999999999999877654443333333334
Q ss_pred CCCCC-CHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIP-DSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~-~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
++... +++++.||.+||..||.+|+++.++++|
T Consensus 242 ~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 242 IPSYLLSPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred CCCCcCCHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 55555 8899999999999999999999999987
No 17
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=7.1e-40 Score=361.60 Aligned_cols=253 Identities=22% Similarity=0.218 Sum_probs=214.8
Q ss_pred CccceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEE
Q 000410 23 SSYNLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 23 ~~~~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~ 100 (1553)
...+|++.+.||+|.||+|-+|... ++.||||.+.|.. ...+.-.-.+++|++||..|+||||+.+|++|+..+.+
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdk--IkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKI 128 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDK--IKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKI 128 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhh--cccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceE
Confidence 3447899999999999999999874 4779999997753 23344556789999999999999999999999999999
Q ss_pred EEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCC
Q 000410 101 YLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~ 179 (1553)
.|||||.. |.||||++.++.|++.+++.+++||..|+.|||.++++|||||.+|||++.++++||+|||++..+.
T Consensus 129 vivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~---- 204 (668)
T KOG0611|consen 129 VIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYA---- 204 (668)
T ss_pred EEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhc----
Confidence 99999999 7999999999999999999999999999999999999999999999999999999999999986541
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQH 259 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~ 259 (1553)
...+..+.+|+|-|.+||++.+..+ -++.+|.||||++||.|+.|..||++.+...+.+........
T Consensus 205 ----~~kfLqTFCGSPLYASPEIvNG~PY---------~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYr 271 (668)
T KOG0611|consen 205 ----DKKFLQTFCGSPLYASPEIVNGTPY---------KGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYR 271 (668)
T ss_pred ----cccHHHHhcCCcccCCccccCCCCC---------CCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhccccc
Confidence 2345678899999999998764432 368999999999999999999999988765544333322211
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
-+..+ ....-||+.||..||++|.|++++..|||-
T Consensus 272 EP~~P-SdA~gLIRwmLmVNP~RRATieDiAsHWWv 306 (668)
T KOG0611|consen 272 EPETP-SDASGLIRWMLMVNPERRATIEDIASHWWV 306 (668)
T ss_pred CCCCC-chHHHHHHHHHhcCcccchhHHHHhhhhee
Confidence 22233 368999999999999999999999999873
No 18
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=1.2e-38 Score=368.95 Aligned_cols=254 Identities=20% Similarity=0.270 Sum_probs=205.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++++.||+|+||.||+|+-++ ..+|+|++.|.. .-.....+.++.|+.+|...++|+||++|-.|++..++|||
T Consensus 142 DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~--M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYLi 219 (550)
T KOG0605|consen 142 DFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSE--MLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYLI 219 (550)
T ss_pred cchhheeeccccceeEEEEEEccCCcEEeeecccHHH--HHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEEE
Confidence 89999999999999999998764 669999998762 22233445688899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC-----
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP----- 177 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~----- 177 (1553)
|||++ |++..+|...+.|++..++.++.+++.|++.||++|++||||||+|+|||..|++||+|||+++.....
T Consensus 220 MEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~ 299 (550)
T KOG0605|consen 220 MEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIES 299 (550)
T ss_pred EEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhh
Confidence 99999 599999999999999999999999999999999999999999999999999999999999998654321
Q ss_pred ------------CCCCCCcce-----------------------eeecCCCCccccCcchhcccCCccccccCCCCCCcc
Q 000410 178 ------------YDDPSDFSF-----------------------FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSM 222 (1553)
Q Consensus 178 ------------~~~~~~~~~-----------------------~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~ 222 (1553)
...+.++.. +.-...|||.|+|||+|.+ ..|+..+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~----------kgY~~~c 369 (550)
T KOG0605|consen 300 YRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLG----------KGYGKEC 369 (550)
T ss_pred hcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhc----------CCCCccc
Confidence 111122221 1113468999999998873 4578899
Q ss_pred cHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCC----CCCCCCCCCHHHHHHHHHhcccCcCCCC---CHHHHHHh
Q 000410 223 DIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDP----SQHLEKIPDSGIRKMILHMIQLEPELRF---SAESYLQN 292 (1553)
Q Consensus 223 DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~LI~~mL~~dP~~Rp---sa~elL~~ 292 (1553)
|.||||||+|||+.|.|||..++.....+..... ...-....++++++||.+||. ||++|. +++||-+|
T Consensus 370 DwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~H 445 (550)
T KOG0605|consen 370 DWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKH 445 (550)
T ss_pred cHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcC
Confidence 9999999999999999999876654433222211 111111234789999999999 999999 48888888
No 19
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-39 Score=344.55 Aligned_cols=245 Identities=19% Similarity=0.228 Sum_probs=210.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|+..+.||.|+||+|.+++++. ..+|+|++.+.. .... ...+....|..+|+.+.||+++++++.+.+.+.+|||
T Consensus 45 dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~-vVkl-KQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 45 DFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQK-VVKL-KQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhheeeeccCccceEEEEEEccCCceeehhhcCHHH-HHHH-HHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 78899999999999999999864 569999998762 1122 2344577889999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ |.|+.++++.+++++..++.++.||+.||+|||+++|++|||||||||+|.+|.+||+|||+|+...
T Consensus 123 meyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~------- 195 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVS------- 195 (355)
T ss_pred EeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEec-------
Confidence 99999 5999999999999999999999999999999999999999999999999999999999999999762
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK 262 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~ 262 (1553)
...-|-||||.|+|||++. ..+|+.++|.||||+++|||+.|.|||-..+..++...+....-.+|.
T Consensus 196 ---~rT~TlCGTPeYLAPEii~----------sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~ 262 (355)
T KOG0616|consen 196 ---GRTWTLCGTPEYLAPEIIQ----------SKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPS 262 (355)
T ss_pred ---CcEEEecCCccccChHHhh----------cCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCc
Confidence 1134678999999999764 557899999999999999999999999776655554444444455677
Q ss_pred CCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 263 IPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
..+..+++||.++|+.|-.+|. ..+++..|
T Consensus 263 ~fs~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H 297 (355)
T KOG0616|consen 263 YFSSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNH 297 (355)
T ss_pred ccCHHHHHHHHHHHhhhhHhhhcCcCCCccccccC
Confidence 7788999999999999999994 44556555
No 20
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-37 Score=350.63 Aligned_cols=253 Identities=21% Similarity=0.201 Sum_probs=207.6
Q ss_pred cceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
-+|++.+.||.|.-+.||+|++. +..||||++.... .......+++|...|+.++||||++++..|..+..+|+
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEk----c~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWv 101 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEK----CNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWV 101 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhh----hhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEE
Confidence 38999999999999999999985 5779999997652 23336678899999999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCC
Q 000410 103 LRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~ 179 (1553)
||+||. |++.+.++.. ..++|..+..|++++++||.|||.+|.||||||+.||||+++|.|||+|||.+.......
T Consensus 102 VmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G- 180 (516)
T KOG0582|consen 102 VMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG- 180 (516)
T ss_pred eehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccC-
Confidence 999999 7999999753 339999999999999999999999999999999999999999999999999765554322
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHHhcCCCCCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRRGQYDPSQ 258 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~~~~~~~~ 258 (1553)
......|.+..|++||||||++. .+...|+.|+||||||++..||.+|+.||..-. +..+........+
T Consensus 181 --~R~~~rf~tfvgtp~wmAPEvl~--------q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp 250 (516)
T KOG0582|consen 181 --DRQVTRFNTFVGTPCWMAPEVLM--------QQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPP 250 (516)
T ss_pred --ceeeEeeccccCcccccChHHhh--------hcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCC
Confidence 22223337889999999999975 334579999999999999999999999996333 2222221111111
Q ss_pred ---------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 ---------HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ---------~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+..+..++++|..||++||.+||||+++|+|
T Consensus 251 ~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 251 TLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred CcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 1122335689999999999999999999999998
No 21
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-38 Score=352.11 Aligned_cols=250 Identities=20% Similarity=0.261 Sum_probs=203.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe-----CC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET-----DK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~-----~~ 98 (1553)
.|...+.||.|+||.|+.|.+.. ..||||.+... .......++..+|..+|+.++|+||+.+.+++.. -+
T Consensus 23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~---F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP---FENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred eecccccccCcceeeEEEEEEcCCCCEeehhhhhhh---hhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 56668999999999999998864 67999988533 3445566677788899999999999999998855 35
Q ss_pred EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 99 AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 99 ~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
.+|+|+|+|+.+|...|+.++.|++..+..+++||++||+|+|+.||+||||||.|+|++.+..+||+|||+|+.....
T Consensus 100 DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~- 178 (359)
T KOG0660|consen 100 DVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF- 178 (359)
T ss_pred eeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceeecccc-
Confidence 7999999999999999999988999999999999999999999999999999999999999999999999999876332
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH-----------
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----------- 247 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~----------- 247 (1553)
. ...+.+....|.+|+|||++. ....|+.+.||||+|||++||++|+|.|.+.+..
T Consensus 179 ~----~~~~mTeYVaTRWYRAPElll---------~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lG 245 (359)
T KOG0660|consen 179 F----EDGFMTEYVATRWYRAPELLL---------NSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLG 245 (359)
T ss_pred C----cccchhcceeeeeecCHHHHh---------ccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcC
Confidence 1 122233445688999999874 3458999999999999999999999999654321
Q ss_pred ----------------HHHhcCCC-CCC---CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 248 ----------------AYRRGQYD-PSQ---HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 248 ----------------~~~~~~~~-~~~---~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.|.+.... +.. .+....++...+|+.+||..||.+|+|++|+|+|
T Consensus 246 tP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 246 TPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred CCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 11111111 111 1222446789999999999999999999999998
No 22
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-38 Score=336.08 Aligned_cols=254 Identities=23% Similarity=0.234 Sum_probs=214.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccC---CCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRG---DYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~---~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~ 99 (1553)
.|.-.+.||+|..+.|.+|.++. +.+|+|++.... ......+..+.-..|+.||+++ .||||++++++|+++..
T Consensus 18 ~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF 97 (411)
T KOG0599|consen 18 KYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAF 97 (411)
T ss_pred hcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcch
Confidence 46667899999999999998864 669999887652 2233555666677888999998 59999999999999999
Q ss_pred EEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
.++|+|.|+ |.|+|++...-.+++.+.+.|++||++|++|||.++|+||||||+|||++++.+++|+|||+++.....
T Consensus 98 ~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~G- 176 (411)
T KOG0599|consen 98 VFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPG- 176 (411)
T ss_pred hhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCc-
Confidence 999999999 899999999988999999999999999999999999999999999999999999999999999876221
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCC-chHH---HHHHhcCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE-LSHL---LAYRRGQY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~-~~~~---~~~~~~~~ 254 (1553)
......+|||.|+|||.+...-++ ....|+..+|+|++|+|+|.|+.|.|||- ..++ ..+..|.|
T Consensus 177 -------ekLrelCGTPgYLAPEtikC~m~e----~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGky 245 (411)
T KOG0599|consen 177 -------EKLRELCGTPGYLAPETIKCSMYE----NHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKY 245 (411)
T ss_pred -------hhHHHhcCCCcccChhheeeeccc----CCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhccc
Confidence 123566899999999998755432 34568999999999999999999988874 3443 34567888
Q ss_pred CCC-CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 DPS-QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ~~~-~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... +.|..+. ...++||.+||+.||.+|.|++|+|.|
T Consensus 246 qF~speWadis-~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 246 QFRSPEWADIS-ATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred ccCCcchhhcc-ccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 744 4555554 579999999999999999999999998
No 23
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4e-38 Score=357.22 Aligned_cols=261 Identities=17% Similarity=0.157 Sum_probs=205.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCC----CcCHHH-----HHHHHHHHHHHHhcCCCCCeeEEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGD----YIDLRE-----YERRLFHIRETFRSIDHPHVWAFQFWQ 94 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~----~~~~~~-----~~~~l~~e~~~l~~l~hpnIv~~~~~~ 94 (1553)
+|++.+.||+|.||+|.+|++.. ..||||++.|..- ....+. -.+++++|+.+|+++.|||||+++++.
T Consensus 98 qy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvL 177 (576)
T KOG0585|consen 98 QYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVL 177 (576)
T ss_pred heehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEee
Confidence 79999999999999999999864 6799999987611 111111 124788999999999999999999999
Q ss_pred EeC--CEEEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcc
Q 000410 95 ETD--KAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASF 171 (1553)
Q Consensus 95 ~~~--~~~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a 171 (1553)
.+. +.+|||+|||. |.+...-...+-+++.+++.|+++++.||+|||.+||+||||||+|+||+++|+|||+|||.+
T Consensus 178 DDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs 257 (576)
T KOG0585|consen 178 DDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVS 257 (576)
T ss_pred cCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeecccee
Confidence 764 57999999999 555433333334999999999999999999999999999999999999999999999999988
Q ss_pred ccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHh
Q 000410 172 KPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRR 251 (1553)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~ 251 (1553)
...... ...+....+....|||.|+|||.+.+... ....+.+.||||+|++||.|+.|+.||-.+.......
T Consensus 258 ~~~~~~--~~~~~d~~L~~tvGTPAF~APE~c~~~~~------~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~ 329 (576)
T KOG0585|consen 258 NEFPQG--SDEGSDDQLSRTVGTPAFFAPELCSGGNS------FSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFD 329 (576)
T ss_pred eecccC--CccccHHHHhhcCCCccccchHhhcCCCC------ccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHH
Confidence 755322 22223333445679999999998864221 2345778999999999999999988887776666555
Q ss_pred cCCCCCCCCCCC--CCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 252 GQYDPSQHLEKI--PDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 252 ~~~~~~~~~~~~--~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.+....-.++.. ..+.+++||.+||++||++|.+..++..|.+
T Consensus 330 KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 330 KIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred HHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 444433333333 3678999999999999999999999998854
No 24
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=355.99 Aligned_cols=251 Identities=20% Similarity=0.205 Sum_probs=202.6
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC--EE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK--AA 100 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~--~~ 100 (1553)
.+|...+.||+|+||.||++.+.+ ...|||....... .. .+.+.+|..+|++++|||||++++...... .+
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~----~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~ 91 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDS----PT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEY 91 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccc----hh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeee
Confidence 378999999999999999999975 6799999876521 11 566888999999999999999999754443 69
Q ss_pred EEEecccc-CCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec-CCcEEEeecCccccccCC
Q 000410 101 YLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS-WNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~-~~~vkL~DFG~a~~~~~~ 177 (1553)
++.|||++ |+|.+++...+ .|++..++.+++||++||.|||++||+||||||+|||++. ++.+||+|||+++.....
T Consensus 92 ~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~ 171 (313)
T KOG0198|consen 92 NIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK 171 (313)
T ss_pred EeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCccccccccc
Confidence 99999999 69999998866 7999999999999999999999999999999999999999 699999999988765320
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch--HHH-HHHhcCC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS--HLL-AYRRGQY 254 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~--~~~-~~~~~~~ 254 (1553)
...........||+.|||||.+.. +....+++|||||||++.||+||.+||..- ... .+..+..
T Consensus 172 ----~~~~~~~~~~~Gtp~~maPEvi~~---------g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~ 238 (313)
T KOG0198|consen 172 ----GTKSDSELSVQGTPNYMAPEVIRN---------GEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRE 238 (313)
T ss_pred ----cccccccccccCCccccCchhhcC---------CCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhcc
Confidence 011111234568999999998752 112336999999999999999999999751 111 1222222
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
...+.++...++++++||.+|+..||++||||+++|+|.
T Consensus 239 ~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hp 277 (313)
T KOG0198|consen 239 DSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHP 277 (313)
T ss_pred CCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhCh
Confidence 223367777788999999999999999999999999983
No 25
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.4e-37 Score=339.08 Aligned_cols=248 Identities=19% Similarity=0.245 Sum_probs=198.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe--CCEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET--DKAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~--~~~~~ 101 (1553)
+|+.+..|++|.||.||+|+++. ..||+|.++...+... +--.-.+|+.+|.+++|||||.+-++... -+.+|
T Consensus 77 efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~G---FPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 77 EFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEG---FPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred HHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCC---CcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 78889999999999999999964 6799999876532211 11223467789999999999999988754 35699
Q ss_pred EEeccccCCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
||||||+.+|...+.+-+ ++...+++.++.|+++||+|||.+.|+||||||+|+|++..|.+||+|||+|+.+..|...
T Consensus 154 ~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~ 233 (419)
T KOG0663|consen 154 IVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKP 233 (419)
T ss_pred eeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCccc
Confidence 999999999999987654 6999999999999999999999999999999999999999999999999999988666432
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch----HHHHHHhc----
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS----HLLAYRRG---- 252 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~----~~~~~~~~---- 252 (1553)
+.....|.+|+|||++.+. ..|+.+.|+||+|||++||++++|.|.+. ++.++.+-
T Consensus 234 -------~T~lVVTLWYRaPELLLG~---------~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtP 297 (419)
T KOG0663|consen 234 -------YTPLVVTLWYRAPELLLGA---------KTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTP 297 (419)
T ss_pred -------CcceEEEeeecCHHHhcCC---------cccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCC
Confidence 2333468999999998643 47899999999999999999999999753 22222110
Q ss_pred ---CCCC--------------------CCCCCCC-CCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 ---QYDP--------------------SQHLEKI-PDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ---~~~~--------------------~~~~~~~-~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+++. ...+... .++...+|+..+|..||.+|.||+|.|+|
T Consensus 298 te~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~h 361 (419)
T KOG0663|consen 298 SEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLKH 361 (419)
T ss_pred ccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhcc
Confidence 1110 0001111 34678899999999999999999999998
No 26
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-37 Score=351.32 Aligned_cols=245 Identities=24% Similarity=0.264 Sum_probs=207.4
Q ss_pred ceEEEEEeeccCcEEEEEEEE--CCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~--~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
=|.+.+.||+|.|+.|.+|+| .+..||||++.|..- .......+..|++.|+.++|||||++|+++.+...+|||
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKl---D~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLi 95 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKL---DTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLI 95 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEeccccc---chhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEE
Confidence 477889999999999999998 467899999987621 122344577888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEe-cCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT-SWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~-~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+|+-+ |+|+|||.+. ..+++..+++++.||+.|+.|||+..|||||||||||.+- .-|-|||+|||++..+. |
T Consensus 96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~-P--- 171 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ-P--- 171 (864)
T ss_pred EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCC-C---
Confidence 99999 6999999654 4599999999999999999999999999999999998765 56899999999886541 1
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch----HHHHHHhcCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS----HLLAYRRGQYDP 256 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~----~~~~~~~~~~~~ 256 (1553)
.....+.+|+..|-|||++.+..++ .+++||||||+|||.|++|++||... .+..+..+.|.
T Consensus 172 ----G~kL~TsCGSLAYSAPEILLGDsYD---------APAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYt- 237 (864)
T KOG4717|consen 172 ----GKKLTTSCGSLAYSAPEILLGDSYD---------APAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYT- 237 (864)
T ss_pred ----cchhhcccchhhccCchhhhcCccC---------CcchhhhHHHHHHHHHHhCCCccccccchhhhhhhhccccc-
Confidence 2245788999999999999876655 57899999999999999999999644 34455555554
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.+...+.++++||..||..||.+|.+.++|..+-|
T Consensus 238 ---vPshvS~eCrdLI~sMLvRdPkkRAslEeI~s~~W 272 (864)
T KOG4717|consen 238 ---VPSHVSKECRDLIQSMLVRDPKKRASLEEIVSTSW 272 (864)
T ss_pred ---CchhhhHHHHHHHHHHHhcCchhhccHHHHhcccc
Confidence 55666789999999999999999999999998743
No 27
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-36 Score=359.57 Aligned_cols=251 Identities=19% Similarity=0.190 Sum_probs=208.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECCce-EEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-EEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEGL-VLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK-AAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~~-vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~-~~~lV 103 (1553)
+..+.+.||+|+||+||++.+.+.. ||||++...... ... .+.+.+|+.+|.+++|||||+|++++.... ..+||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~--~~~-~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iV 118 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFD--DES-RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIV 118 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcC--hHH-HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEE
Confidence 5566778999999999999999987 999999765222 122 778999999999999999999999998887 79999
Q ss_pred ecccc-CCHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCCCcEEEecCC-cEEEeecCccccccCCC
Q 000410 104 RQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKG-ICHGDIKCENVLVTSWN-WLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~g-IvHrDIKp~NILv~~~~-~vkL~DFG~a~~~~~~~ 178 (1553)
|||++ |+|++++.. +..++...+..|+.||++|++|||+++ ||||||||+|||++.++ ++||+|||+++......
T Consensus 119 tEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 119 TEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred EEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 99999 799999977 567999999999999999999999999 99999999999999998 99999999998653221
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH--HhcCCCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY--RRGQYDP 256 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~--~~~~~~~ 256 (1553)
.......||+.|||||++.+. ...|+.|+||||||+++|||+||+.||........ .......
T Consensus 199 -------~~~~~~~GT~~wMAPEv~~~~--------~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~ 263 (362)
T KOG0192|consen 199 -------TSMTSVAGTYRWMAPEVLRGE--------KSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGL 263 (362)
T ss_pred -------ccccCCCCCccccChhhhcCC--------CCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCC
Confidence 111225689999999988532 45799999999999999999999999975443222 2222223
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.+.++...++.+..|+.+||..||++||++.+++..++
T Consensus 264 Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~ 301 (362)
T KOG0192|consen 264 RPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLE 301 (362)
T ss_pred CCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHH
Confidence 34455557789999999999999999999999998754
No 28
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.3e-37 Score=342.26 Aligned_cols=241 Identities=24% Similarity=0.364 Sum_probs=192.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--C---
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD--K--- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~--~--- 98 (1553)
.|.-.+.+|+|+||.||+|...+ +.||||......... .+|.++|+.++||||+++.-+|... +
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k---------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~~ 95 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK---------NRELQIMRKLDHPNIVRLLYFFSSSTESDEV 95 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC---------cHHHHHHHhcCCcCeeeEEEEEEecCCCchh
Confidence 58889999999999999998854 679999886543221 2455788999999999998777432 2
Q ss_pred EEEEEeccccCCHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC-CcEEEeecCcccc
Q 000410 99 AAYLLRQYFFNSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW-NWLYLSDFASFKP 173 (1553)
Q Consensus 99 ~~~lV~E~~~gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~-~~vkL~DFG~a~~ 173 (1553)
+..+||||++.+|+++++. +..++..+++-+++||++||.|||+.|||||||||.|+|||.+ |.+||||||+|+.
T Consensus 96 ~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~ 175 (364)
T KOG0658|consen 96 YLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKV 175 (364)
T ss_pred HHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCccee
Confidence 3458999999999999974 5669999999999999999999999999999999999999976 8999999999997
Q ss_pred ccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHHH
Q 000410 174 TYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAY 249 (1553)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~~ 249 (1553)
....+.+ .++. .|..|+|||.+.+. ..|+.+.||||+|||++||+.|+|.|.++. +..+
T Consensus 176 L~~~epn---iSYi-----cSRyYRaPELifga---------~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eI 238 (364)
T KOG0658|consen 176 LVKGEPN---ISYI-----CSRYYRAPELIFGA---------TEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEI 238 (364)
T ss_pred eccCCCc---eeEE-----EeccccCHHHHcCc---------cccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHH
Confidence 7443322 3333 36779999998753 479999999999999999999999997543 2211
Q ss_pred Hh--------------cC-----CC---CC---CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 250 RR--------------GQ-----YD---PS---QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 250 ~~--------------~~-----~~---~~---~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+ .. +. .. ..+....++++.+|+.++|..+|.+|.++.|++.|
T Consensus 239 ik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 239 IKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred HHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 11 11 01 00 01333456789999999999999999999999998
No 29
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.1e-37 Score=326.63 Aligned_cols=248 Identities=22% Similarity=0.231 Sum_probs=210.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+++.||+|.||.||+|+.+. -.||+||+.|.. ........++.+|+++...|+||||+++|++|.++...||+
T Consensus 23 dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsq--i~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 23 DFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQ--ILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hccccccccCCccccEeEeeeccCCcEEEEeeeeHHH--HHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 78999999999999999999876 359999998862 33445677899999999999999999999999999999999
Q ss_pred ecccc-CCHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLS--TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~--~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+||.. |+|+..+. ....+++.....+++|++.||.|||.++|+||||||+|+|++..|.+||+|||-+....
T Consensus 101 lEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p----- 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----- 175 (281)
T ss_pred EEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC-----
Confidence 99999 89999998 45569999999999999999999999999999999999999999999999999775431
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHL 260 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~ 260 (1553)
.....+.+||..|.+||+.. +..++..+|+|++|++.||++.|.|||......+..+........+
T Consensus 176 ----~~kR~tlcgt~dyl~pEmv~----------~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~ 241 (281)
T KOG0580|consen 176 ----SNKRKTLCGTLDYLPPEMVE----------GRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKF 241 (281)
T ss_pred ----CCCceeeecccccCCHhhcC----------CCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccC
Confidence 11235678999999999654 5567889999999999999999999997554332222222222234
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+...+.+++++|.+||..+|.+|.+..|+++|++
T Consensus 242 p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpw 275 (281)
T KOG0580|consen 242 PSTISGGAADLISRLLVKNPIERLALTEVMDHPW 275 (281)
T ss_pred CcccChhHHHHHHHHhccCccccccHHHHhhhHH
Confidence 4566789999999999999999999999999965
No 30
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-36 Score=360.37 Aligned_cols=247 Identities=18% Similarity=0.217 Sum_probs=210.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~l 102 (1553)
+|++.++||+|.||+|+++..++ +.+|||+++|...- ..+ ..+.+..|.+++... +||.++.++..|++.+++|+
T Consensus 369 ~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il-~~d-~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~f 446 (694)
T KOG0694|consen 369 DFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDIL-QRD-EVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLFF 446 (694)
T ss_pred ceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeecccee-ccc-cHHHHHHHHHHHHHhccCCeEeecccccccCCeEEE
Confidence 89999999999999999999865 67999999886322 212 223455666677666 49999999999999999999
Q ss_pred EeccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||+.| + .-.+...+.+++..++.|+..++.||+|||++||||||||.+|||+|.+|++||+|||++|......+
T Consensus 447 vmey~~Ggd-m~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~-- 523 (694)
T KOG0694|consen 447 VMEYVAGGD-LMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGD-- 523 (694)
T ss_pred EEEecCCCc-EEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCC--
Confidence 9999995 6 33444456699999999999999999999999999999999999999999999999999996532222
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~ 261 (1553)
...|.+|||.|||||++. +..|+.++|.|||||+||||+.|.+||.+++...+-..+.......+
T Consensus 524 -----~TsTfCGTpey~aPEil~----------e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP 588 (694)
T KOG0694|consen 524 -----RTSTFCGTPEFLAPEVLT----------EQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYP 588 (694)
T ss_pred -----ccccccCChhhcChhhhc----------cCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 346789999999999764 56899999999999999999999999999888888777777777788
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCH-----HHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSA-----ESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 292 (1553)
...+.+..++++++|.+||++|..+ +++.+|
T Consensus 589 ~~ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~h 624 (694)
T KOG0694|consen 589 RFLSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKH 624 (694)
T ss_pred CcccHHHHHHHHHHhccCcccccCCCCCCchhhhhC
Confidence 8888999999999999999999954 667666
No 31
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.2e-35 Score=325.46 Aligned_cols=339 Identities=16% Similarity=0.200 Sum_probs=242.3
Q ss_pred cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEe
Q 000410 1127 PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA 1206 (1553)
Q Consensus 1127 p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s 1206 (1553)
|--++-+.+.||.++|.|++|+|+|..+||||.|.|||+||+.+.. +..+.++|...|.|++|+|+|..||+|+
T Consensus 103 pvtrCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeT------p~~t~KgH~~WVlcvawsPDgk~iASG~ 176 (480)
T KOG0271|consen 103 PVTRCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTET------PLFTCKGHKNWVLCVAWSPDGKKIASGS 176 (480)
T ss_pred ccceeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCC------cceeecCCccEEEEEEECCCcchhhccc
Confidence 4456778899999999999999999999999999999999998754 6678899999999999999999999999
Q ss_pred CCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCC--CCcceEEEEEeCCceEEEEeCCCCccccee
Q 000410 1207 CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTD--NCASHMFMYSTQNCGIHLWDTRSNSNTWTL 1284 (1553)
Q Consensus 1207 ~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l 1284 (1553)
.||+|++||..+.+ .+-.....|...|.+++|.|- ......|++++.||.|+|||+..++++..+
T Consensus 177 ~dg~I~lwdpktg~-------------~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~l 243 (480)
T KOG0271|consen 177 KDGSIRLWDPKTGQ-------------QIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTL 243 (480)
T ss_pred cCCeEEEecCCCCC-------------cccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEe
Confidence 99999999986422 122233467778888889774 112468999999999999999999999988
Q ss_pred ccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEee----------cCCCCCcc----
Q 000410 1285 KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLF----------VPPPNAAV---- 1350 (1553)
Q Consensus 1285 ~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~----------~p~~~~~~---- 1350 (1553)
.+ |..+|+|++|.-+| ++.+|+.|++|++|+...+.+.+.++. |...|+.+.+. .|.+....
T Consensus 244 sg--HT~~VTCvrwGG~g-liySgS~DrtIkvw~a~dG~~~r~lkG-HahwvN~lalsTdy~LRtgaf~~t~~~~~~~se 319 (480)
T KOG0271|consen 244 SG--HTASVTCVRWGGEG-LIYSGSQDRTIKVWRALDGKLCRELKG-HAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSE 319 (480)
T ss_pred cc--CccceEEEEEcCCc-eEEecCCCceEEEEEccchhHHHhhcc-cchheeeeeccchhhhhccccccccccCCChHH
Confidence 76 99999999998665 999999999999999988888877775 55566666541 11111100
Q ss_pred ------------ccCCCCEEEEEEcCCeEEEEEcCCCc-EE--------EEEecccCCCCCccCCCcccccCCCCCCCCC
Q 000410 1351 ------------STTARPLIYVAAGCNEVSLWNAENGS-CH--------QVLRTANYDGDTEMSDLPWAFARPSSRSNPK 1409 (1553)
Q Consensus 1351 ------------~s~~~~~l~s~s~dg~V~vWDl~tg~-~~--------~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 1409 (1553)
....+..+++|+.|.++.+|+-...+ ++ .+-.+.-.+....+ .+.+..+
T Consensus 320 ~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~I----------ASaSFDk 389 (480)
T KOG0271|consen 320 EQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYI----------ASASFDK 389 (480)
T ss_pred HHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEE----------EEeeccc
Confidence 00112346666666666666543211 10 01000000000000 0000001
Q ss_pred ccccccccccccccccCCCCCCccCcEEeccCCCCeEE-EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeec
Q 000410 1410 TDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLL-TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSS 1488 (1553)
Q Consensus 1410 ~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~ll-Tgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~ 1488 (1553)
....+.+... .-+....+|...|+.++|+.|.+|+ +|+.|.++++||+++.+..+
T Consensus 390 SVkLW~g~tG---k~lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~--------------------- 445 (480)
T KOG0271|consen 390 SVKLWDGRTG---KFLASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQ--------------------- 445 (480)
T ss_pred ceeeeeCCCc---chhhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecc---------------------
Confidence 1111111000 1122335677789999999998655 99999999999998654432
Q ss_pred CCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1489 SGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1489 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.+.+|.|.|.+| .|+++|+.++||+.|.++++|+
T Consensus 446 ------------------------------DLpGh~DEVf~v-DwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 446 ------------------------------DLPGHADEVFAV-DWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred ------------------------------cCCCCCceEEEE-EecCCCceeecCCCceEEEeec
Confidence 234599999999 7999999999999999999996
No 32
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=3.5e-36 Score=354.62 Aligned_cols=245 Identities=19% Similarity=0.213 Sum_probs=203.0
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+. ++.||+|++.+... ......+.+.+|..+++.++||||+++++++.++...|+|
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 79 (291)
T cd05612 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEV--IRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYML 79 (291)
T ss_pred CceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHH--hhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEE
Confidence 6889999999999999999986 46799999865411 1122345678889999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+. |+|.+++..++.+++.++..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~----- 154 (291)
T cd05612 80 MEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR----- 154 (291)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC-----
Confidence 99998 699999988888999999999999999999999999999999999999999999999999998754211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK 262 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~ 262 (1553)
.....|++.|+|||.+. +..++.++|||||||++|+|++|.+||..................++.
T Consensus 155 -----~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~ 219 (291)
T cd05612 155 -----TWTLCGTPEYLAPEVIQ----------SKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR 219 (291)
T ss_pred -----cccccCChhhcCHHHHc----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCc
Confidence 11235788999999774 335688999999999999999999999765443332222222223444
Q ss_pred CCCHHHHHHHHHhcccCcCCCCC-----HHHHHHh
Q 000410 263 IPDSGIRKMILHMIQLEPELRFS-----AESYLQN 292 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 292 (1553)
..++.+++||.+||+.||.+||+ ++++++|
T Consensus 220 ~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 220 HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 55788999999999999999995 9999988
No 33
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=6.3e-36 Score=358.69 Aligned_cols=245 Identities=19% Similarity=0.212 Sum_probs=203.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++.. +.||+|++.+.. .......+.+.+|..+++.++||||+++++++.+++..|+|
T Consensus 19 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 96 (329)
T PTZ00263 19 DFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKRE--ILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFL 96 (329)
T ss_pred heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHH--HhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEE
Confidence 79999999999999999999864 669999997541 11123345678888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+. |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 97 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~----- 171 (329)
T PTZ00263 97 LEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR----- 171 (329)
T ss_pred EcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC-----
Confidence 99998 599999988888999999999999999999999999999999999999999999999999998754211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK 262 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~ 262 (1553)
. .+..|++.|+|||.+. +..++.++|||||||++|||++|.+||..................++.
T Consensus 172 ~-----~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~ 236 (329)
T PTZ00263 172 T-----FTLCGTPEYLAPEVIQ----------SKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN 236 (329)
T ss_pred c-----ceecCChhhcCHHHHc----------CCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCC
Confidence 0 1235789999999774 335688999999999999999999998655433322222222223455
Q ss_pred CCCHHHHHHHHHhcccCcCCCCC-----HHHHHHh
Q 000410 263 IPDSGIRKMILHMIQLEPELRFS-----AESYLQN 292 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 292 (1553)
..+..+++||.+||+.||.+|++ ++++++|
T Consensus 237 ~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 237 WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 56788999999999999999997 7999988
No 34
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=6.8e-38 Score=326.96 Aligned_cols=245 Identities=23% Similarity=0.312 Sum_probs=205.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|.+.+.||+|.|+.|++|.+.. +.+|+|++....-. .. -.+.+.+|++|.+.|+||||+++++.+..+...|||
T Consensus 12 ~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~--~~-~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 12 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLS--AR-DFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred hhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhc--cc-cHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 67888999999999999998853 56888887644211 11 345688999999999999999999999999999999
Q ss_pred eccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC---cEEEeecCccccccCCCC
Q 000410 104 RQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN---WLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 104 ~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~---~vkL~DFG~a~~~~~~~~ 179 (1553)
+|++.| +|..-|-.+-.+++..+-.+++||++||.|||.+||+|||+||+|+|+-+.. -+||+|||+++....
T Consensus 89 Fe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~--- 165 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND--- 165 (355)
T ss_pred EecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCC---
Confidence 999995 8887776677789999999999999999999999999999999999997643 599999999987741
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHHHHhcCCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRRGQYD 255 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~~~~~~~~ 255 (1553)
........|||.|||||++. ..+|+..+|||+.|+|||-|+.|.+||...+ ...++++.++
T Consensus 166 -----g~~~~G~~GtP~fmaPEvvr----------kdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd 230 (355)
T KOG0033|consen 166 -----GEAWHGFAGTPGYLSPEVLK----------KDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYD 230 (355)
T ss_pred -----ccccccccCCCcccCHHHhh----------cCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccC
Confidence 11223456899999999764 5689999999999999999999999997632 3456778888
Q ss_pred CCC-CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 256 PSQ-HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 256 ~~~-~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... .++.+ +++.++||++||..||.+|.|+.|+|+|
T Consensus 231 ~~~~~w~~i-s~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 231 YPSPEWDTV-TPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred CCCcccCcC-CHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 554 55555 5789999999999999999999999998
No 35
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.1e-36 Score=339.14 Aligned_cols=248 Identities=22% Similarity=0.283 Sum_probs=199.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCC-eeEEEEEEEeCC----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPH-VWAFQFWQETDK---- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpn-Iv~~~~~~~~~~---- 98 (1553)
.|...++||+|.||+||+|+.. +..||+|.+....+. +.......+|+.+|+.++|+| |+.+++++.+.+
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~---EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~ 88 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEE---EGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRG 88 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccc---cCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccc
Confidence 5677788999999999999985 357999998765221 112233457778999999999 999999998877
Q ss_pred --EEEEEeccccCCHHHHhcCCC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccc
Q 000410 99 --AAYLLRQYFFNSLRDRLSTPP----FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 99 --~~~lV~E~~~gsL~d~l~~~~----~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~ 172 (1553)
..|+|+||++.+|.+++...+ .++...++.+++||+.||+|||++||+||||||+||||++.|.+||+|||+|+
T Consensus 89 ~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAr 168 (323)
T KOG0594|consen 89 IGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLAR 168 (323)
T ss_pred cceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHH
Confidence 899999999999999997755 48888999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHH
Q 000410 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLA 248 (1553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~ 248 (1553)
....|... +....+|.+|+|||++.+. ..|+..+||||+|||++||+++++.|.+.. +..
T Consensus 169 a~~ip~~~-------yt~evvTlWYRaPEvLlGs---------~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~ 232 (323)
T KOG0594|consen 169 AFSIPMRT-------YTPEVVTLWYRAPEVLLGS---------TSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFR 232 (323)
T ss_pred HhcCCccc-------ccccEEEeeccCHHHhcCC---------CcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHH
Confidence 76655432 3455678999999998743 358999999999999999999999997543 222
Q ss_pred HHhcCC-CCCCCCC-------------------------CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 YRRGQY-DPSQHLE-------------------------KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 ~~~~~~-~~~~~~~-------------------------~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.+..- +....|+ +..++...+++.+||+.+|.+|.||+.+|+|
T Consensus 233 If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 233 IFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred HHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 211100 0000111 0112478999999999999999999999998
No 36
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1e-35 Score=356.06 Aligned_cols=243 Identities=17% Similarity=0.195 Sum_probs=198.3
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF 108 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~ 108 (1553)
+.||+|+||+||+|++.. +.||+|++.+... ........+.+|..+++.++||||++++++++.++..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~ 78 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVI--IAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYAN 78 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCC
Confidence 469999999999999853 6699999975421 112233456678899999999999999999999999999999999
Q ss_pred -CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 109 -NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 109 -gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
|+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~-------~ 151 (323)
T cd05571 79 GGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGA-------T 151 (323)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCC-------c
Confidence 59999998888899999999999999999999999999999999999999999999999999875321111 1
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCHH
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSG 267 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (1553)
.....|++.|+|||++. +..++.++||||+||++|||++|.+||...+..............++...++.
T Consensus 152 ~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~ 221 (323)
T cd05571 152 MKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSPE 221 (323)
T ss_pred ccceecCccccChhhhc----------CCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHH
Confidence 12345789999999764 34678899999999999999999999975544333222222222344556789
Q ss_pred HHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 268 IRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 268 l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
+++||.+||+.||++|| ++.++++|
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 222 AKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred HHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 99999999999999999 89999998
No 37
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=2e-35 Score=355.20 Aligned_cols=245 Identities=18% Similarity=0.205 Sum_probs=202.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC---ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE---GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~---~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
+|++.+.||+|+||.||+|.+.+ ..||+|++.+... ........+.+|..+++.++||||+++++++.++...|+
T Consensus 31 ~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 31 DFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKI--IKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHh--hhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 79999999999999999998643 3699999975421 112334567788899999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||+. |+|.+++..+..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 109 v~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~---- 184 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR---- 184 (340)
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC----
Confidence 999998 699999988888999999999999999999999999999999999999999999999999998754210
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~ 261 (1553)
..+..|++.|+|||++. +..++.++||||+||++|||++|.+||..................++
T Consensus 185 ------~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p 248 (340)
T PTZ00426 185 ------TYTLCGTPEYIAPEILL----------NVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFP 248 (340)
T ss_pred ------cceecCChhhcCHHHHh----------CCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 12345789999999874 33568899999999999999999999976544332222222222344
Q ss_pred CCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
...++.++++|.+||+.||++|+ +++++++|
T Consensus 249 ~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 249 KFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred CCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 55678899999999999999996 89999998
No 38
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=3.4e-35 Score=345.75 Aligned_cols=247 Identities=20% Similarity=0.300 Sum_probs=196.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||+|++.. ..||+|++...... .....+.+|+.+++.++||||+++++++.+++..|+|
T Consensus 6 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 81 (288)
T cd07871 6 TYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE----GAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLV 81 (288)
T ss_pred cceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC----CcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEE
Confidence 79999999999999999998864 67999998654221 1223456788999999999999999999999999999
Q ss_pred eccccCCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++|+|.+++...+ .+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....+..
T Consensus 82 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~--- 158 (288)
T cd07871 82 FEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK--- 158 (288)
T ss_pred EeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc---
Confidence 9999999999986543 578999999999999999999999999999999999999999999999999875432211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----HhcC-----
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQ----- 253 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~----- 253 (1553)
......+++.|+|||.+.+ ...++.++||||+||++|+|++|++||........ .+..
T Consensus 159 ----~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 225 (288)
T cd07871 159 ----TYSNEVVTLWYRPPDVLLG---------STEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTE 225 (288)
T ss_pred ----cccCceecccccChHHhcC---------CcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 1123356888999997742 23578899999999999999999999965432211 1000
Q ss_pred ----------------CC---CCC--CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 ----------------YD---PSQ--HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ----------------~~---~~~--~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+. ... ......++++++||.+||+.||.+|||++|+++|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~h 285 (288)
T cd07871 226 ETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRH 285 (288)
T ss_pred HHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00 000 0011235688999999999999999999999998
No 39
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.3e-37 Score=345.29 Aligned_cols=247 Identities=17% Similarity=0.143 Sum_probs=208.8
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
..|+..+.||+|.||.||+|.+.. +.||+|++.... .+...+.+++|+.+|.+++++||.++|+.|..+..+++
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~----~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~Lwi 88 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE----AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWI 88 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhh----cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHH
Confidence 367888999999999999999865 569999997652 23334557778899999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
+||||. |++.+.++..+.+.+.++..|+++++.||.|||.++.+|||||+.|||+...|.+||+|||.+.....
T Consensus 89 iMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~----- 163 (467)
T KOG0201|consen 89 IMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTN----- 163 (467)
T ss_pred HHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeec-----
Confidence 999999 69999999988889999999999999999999999999999999999999999999999998865422
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcC-CCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQ-YDPSQHL 260 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~-~~~~~~~ 260 (1553)
......+..|||.|||||++. ...|+.|+||||||++.+||.+|.||+..-....+.--. ...++.+
T Consensus 164 --~~~rr~tfvGTPfwMAPEVI~----------~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~PP~L 231 (467)
T KOG0201|consen 164 --TVKRRKTFVGTPFWMAPEVIK----------QSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSAPPRL 231 (467)
T ss_pred --hhhccccccccccccchhhhc----------cccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCCCCcc
Confidence 222336778999999999775 446889999999999999999999999644433222211 2234455
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
....++.+++||..||++||+.||+|.++|+|
T Consensus 232 ~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 232 DGDFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ccccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 66677889999999999999999999999998
No 40
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.6e-35 Score=353.30 Aligned_cols=242 Identities=22% Similarity=0.306 Sum_probs=195.2
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-C-----CCeeEEEEEEEe
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-H-----PHVWAFQFWQET 96 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-h-----pnIv~~~~~~~~ 96 (1553)
|+|.+.+.||+|.||+|.+|.+.. +.||||+++.. ..+..+-..|+.+|..++ | -|||+++++|..
T Consensus 186 ~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~------k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f 259 (586)
T KOG0667|consen 186 YRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK------KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF 259 (586)
T ss_pred EEEEEEEEecccccceeEEEEecCCCcEEEEEeeccC------hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc
Confidence 478899999999999999999865 56999999765 445556667778888875 3 479999999999
Q ss_pred CCEEEEEeccccCCHHHHhcCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC--cEEEeecCccc
Q 000410 97 DKAAYLLRQYFFNSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN--WLYLSDFASFK 172 (1553)
Q Consensus 97 ~~~~~lV~E~~~gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~--~vkL~DFG~a~ 172 (1553)
.++.|||+|.++.|||++|+.+.+ ++...++.++.||+.||.+||+.||||+||||||||+...+ .||++|||++.
T Consensus 260 r~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc 339 (586)
T KOG0667|consen 260 RNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSC 339 (586)
T ss_pred ccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccc
Confidence 999999999999999999988754 88999999999999999999999999999999999998765 69999999987
Q ss_pred cccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----
Q 000410 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA---- 248 (1553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~---- 248 (1553)
... ..-+ +..-+..|+|||+|. +.+|+.+.||||||||++||++|.|+|.+++...
T Consensus 340 ~~~-----q~vy-----tYiQSRfYRAPEVIL----------GlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~ 399 (586)
T KOG0667|consen 340 FES-----QRVY-----TYIQSRFYRAPEVIL----------GLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLAR 399 (586)
T ss_pred ccC-----Ccce-----eeeeccccccchhhc----------cCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHH
Confidence 541 1111 344567799999876 5689999999999999999999999996543211
Q ss_pred ---------------------H-Hh------------------------------cCCCCC-------CCCCCCCCHHHH
Q 000410 249 ---------------------Y-RR------------------------------GQYDPS-------QHLEKIPDSGIR 269 (1553)
Q Consensus 249 ---------------------~-~~------------------------------~~~~~~-------~~~~~~~~~~l~ 269 (1553)
+ .. ...... ..+....+..+.
T Consensus 400 I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~ 479 (586)
T KOG0667|consen 400 IIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFI 479 (586)
T ss_pred HHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHH
Confidence 0 00 000000 001112245689
Q ss_pred HHHHHhcccCcCCCCCHHHHHHh
Q 000410 270 KMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 270 ~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
++|.+||..||.+|+|+.|+|+|
T Consensus 480 dflk~~L~~dP~~R~tp~qal~H 502 (586)
T KOG0667|consen 480 DFLKRCLEWDPAERITPAQALNH 502 (586)
T ss_pred HHHHHHhccCchhcCCHHHHhcC
Confidence 99999999999999999999999
No 41
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-36 Score=350.00 Aligned_cols=244 Identities=19% Similarity=0.206 Sum_probs=205.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|..-++||+|+.|.||.|+... ..||||.+.+... ..++.+.+|+.+|+..+|+|||.|++.|.-++.+|+|
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q-----~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVV 348 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQ-----PKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVV 348 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccC-----CchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEE
Confidence 68888999999999999998754 5699999987632 2345678888999999999999999998888999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ |+|.|.+.... ++|.++..|+++++.||+|||.+||+|||||.+|||++.+|.+||+|||++..+.....
T Consensus 349 MEym~ggsLTDvVt~~~-~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~--- 424 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKTR-MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS--- 424 (550)
T ss_pred EeecCCCchhhhhhccc-ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccC---
Confidence 99999 59999887654 99999999999999999999999999999999999999999999999999876633222
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCC-chHHHHHHhcCC--CCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE-LSHLLAYRRGQY--DPSQH 259 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~-~~~~~~~~~~~~--~~~~~ 259 (1553)
...+..|||+|||||+. ....|++++||||||+++.||+-|+|||- ...+.++..... .+...
T Consensus 425 ----KR~TmVGTPYWMAPEVv----------trk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk 490 (550)
T KOG0578|consen 425 ----KRSTMVGTPYWMAPEVV----------TRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLK 490 (550)
T ss_pred ----ccccccCCCCccchhhh----------hhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcC
Confidence 23566799999999965 45689999999999999999999998885 333433332222 23333
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+...++.+++|+.+||+.||++|++|.|+|+|
T Consensus 491 ~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 491 NPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred CccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 445667899999999999999999999999998
No 42
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=5.8e-35 Score=347.78 Aligned_cols=241 Identities=18% Similarity=0.250 Sum_probs=197.7
Q ss_pred eeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-C
Q 000410 33 LGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF-N 109 (1553)
Q Consensus 33 LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~-g 109 (1553)
||+|+||.||+|++.+ ..||+|++.+... ........+.+|..+++.++||||+++++++..++..|+||||++ |
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 78 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHI--VSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGG 78 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCC
Confidence 7999999999999864 5699999865411 112334556778899999999999999999999999999999999 6
Q ss_pred CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceeee
Q 000410 110 SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFD 189 (1553)
Q Consensus 110 sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 189 (1553)
+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.++.++|+|||+++....... ...
T Consensus 79 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~-------~~~ 151 (312)
T cd05585 79 ELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD-------KTN 151 (312)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC-------ccc
Confidence 9999998888899999999999999999999999999999999999999999999999999874321111 112
Q ss_pred cCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCHHHH
Q 000410 190 TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIR 269 (1553)
Q Consensus 190 ~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 269 (1553)
...|++.|+|||.+. +..++.++||||+||++|||++|.+||..................++...++.++
T Consensus 152 ~~~gt~~y~aPE~~~----------~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (312)
T cd05585 152 TFCGTPEYLAPELLL----------GHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFPDGFDRDAK 221 (312)
T ss_pred cccCCcccCCHHHHc----------CCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCCCcCCHHHH
Confidence 345789999999774 3467889999999999999999999997655444433333333334555678999
Q ss_pred HHHHHhcccCcCCCC---CHHHHHHh
Q 000410 270 KMILHMIQLEPELRF---SAESYLQN 292 (1553)
Q Consensus 270 ~LI~~mL~~dP~~Rp---sa~elL~~ 292 (1553)
++|.+||+.||++|| ++.|+++|
T Consensus 222 ~li~~~L~~dp~~R~~~~~~~e~l~h 247 (312)
T cd05585 222 DLLIGLLSRDPTRRLGYNGAQEIKNH 247 (312)
T ss_pred HHHHHHcCCCHHHcCCCCCHHHHHcC
Confidence 999999999999997 57899988
No 43
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=7.4e-35 Score=349.17 Aligned_cols=243 Identities=17% Similarity=0.199 Sum_probs=199.8
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF 108 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~ 108 (1553)
+.||+|+||.||++++.. ..||+|++.+... ........+.+|..+++.++||||+++++++..++..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~ 78 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVI--IAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVN 78 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCC
Confidence 469999999999999864 6799999976421 112334566778889999999999999999999999999999999
Q ss_pred -CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 109 -NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 109 -gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
|+|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... ..
T Consensus 79 ~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~-------~~ 151 (328)
T cd05593 79 GGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA-------AT 151 (328)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc-------cc
Confidence 5999999887789999999999999999999999999999999999999999999999999987532111 11
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCHH
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSG 267 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (1553)
.....|++.|+|||.+. +..++.++|||||||++|+|++|.+||..................++...+++
T Consensus 152 ~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~ 221 (328)
T cd05593 152 MKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPRTLSAD 221 (328)
T ss_pred cccccCCcCccChhhhc----------CCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCCCCCCHH
Confidence 22345789999999764 34578899999999999999999999976554444333333333455566789
Q ss_pred HHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 268 IRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 268 l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
+.++|.+||+.||++|+ ++.|+++|
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 222 AKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 99999999999999997 89999998
No 44
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.9e-35 Score=339.19 Aligned_cols=259 Identities=19% Similarity=0.228 Sum_probs=205.5
Q ss_pred cceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~~~~l 102 (1553)
..|++++.||+||.++||++...+ +.||+|.+... ........-+..|+..|.+|+ |.+|+++++|-..++.+||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~---~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYm 437 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLL---EADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYM 437 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHh---hcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEE
Confidence 379999999999999999999875 55666655332 122334455677888999885 8999999999999999999
Q ss_pred EeccccCCHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFFNSLRDRLSTPPF-LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~gsL~d~l~~~~~-l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||-+.+|..+|+++.. ++.-.++.+.+|+|.|+.++|.+||||.||||.|+|+-. |.+||+|||.|+.+ .+
T Consensus 438 vmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlVk-G~LKLIDFGIA~aI-----~~ 511 (677)
T KOG0596|consen 438 VMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLVK-GRLKLIDFGIANAI-----QP 511 (677)
T ss_pred EeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEEe-eeEEeeeechhccc-----Cc
Confidence 999999999999988754 344589999999999999999999999999999999976 99999999999866 33
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccc-cccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHHhcCCCC--C
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQ-VAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRRGQYDP--S 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~-~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~~~~~~--~ 257 (1553)
...+...++.+||+.||+||-+....+.-+ -...-++++++||||||||||+|+.|++||..-. ...-.....++ .
T Consensus 512 DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~ 591 (677)
T KOG0596|consen 512 DTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHE 591 (677)
T ss_pred cccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCcc
Confidence 344566788899999999999864332200 0112347899999999999999999999996322 33333333333 2
Q ss_pred CCCCCCCCHH-HHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKIPDSG-IRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~-l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..++.+++.. +.++++.||.+||++||++.++|+|
T Consensus 592 Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 592 IEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 2566666554 9999999999999999999999998
No 45
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=1.3e-34 Score=322.36 Aligned_cols=287 Identities=17% Similarity=0.230 Sum_probs=246.1
Q ss_pred eeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecC--CcEEEEEeCCC
Q 000410 1132 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH--SAQVVVGACDG 1209 (1553)
Q Consensus 1132 v~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~--~~~las~s~DG 1209 (1553)
+..--|-..+|..+.||.|++.|||||.+|++|||...+.. ..+++.+|.+.|.++.|+|. +..+|+|+.||
T Consensus 168 ~~SQ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~------~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dg 241 (459)
T KOG0272|consen 168 VCSQVGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCN------LLQTLRGHTSRVGAAVFHPVDSDLNLATASADG 241 (459)
T ss_pred hhhhccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcc------eeEEEeccccceeeEEEccCCCccceeeeccCC
Confidence 33334667899999999999999999999999999998775 66789999999999999997 56899999999
Q ss_pred cEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCC
Q 000410 1210 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE 1289 (1553)
Q Consensus 1210 ~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h 1289 (1553)
++++|+++.. ....-..+|...|..++|+|+ |++|++++.|.+-++||++++......++ |
T Consensus 242 tvklw~~~~e--------------~~l~~l~gH~~RVs~VafHPs---G~~L~TasfD~tWRlWD~~tk~ElL~QEG--H 302 (459)
T KOG0272|consen 242 TVKLWKLSQE--------------TPLQDLEGHLARVSRVAFHPS---GKFLGTASFDSTWRLWDLETKSELLLQEG--H 302 (459)
T ss_pred ceeeeccCCC--------------cchhhhhcchhhheeeeecCC---CceeeecccccchhhcccccchhhHhhcc--c
Confidence 9999999731 111223467788889999999 88999999999999999999998876665 9
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEE
Q 000410 1290 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSL 1369 (1553)
Q Consensus 1290 ~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~v 1369 (1553)
...|.+++|.|||..+++|+.|..-+|||+|++.++..+.. |..+|..+.| +| +|..+++||+|++++|
T Consensus 303 s~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~g-H~k~I~~V~f-sP---------NGy~lATgs~Dnt~kV 371 (459)
T KOG0272|consen 303 SKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAG-HIKEILSVAF-SP---------NGYHLATGSSDNTCKV 371 (459)
T ss_pred ccccceeEecCCCceeeccCccchhheeecccCcEEEEecc-cccceeeEeE-CC---------CceEEeecCCCCcEEE
Confidence 99999999999999999999999999999999999998887 7788888888 44 5779999999999999
Q ss_pred EEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCC-CC-eEE
Q 000410 1370 WNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP-GG-DLL 1447 (1553)
Q Consensus 1370 WDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp-~g-~ll 1447 (1553)
||++.-++..++. +|..-|..+.|+| .| +|+
T Consensus 372 WDLR~r~~ly~ip-----------------------------------------------AH~nlVS~Vk~~p~~g~fL~ 404 (459)
T KOG0272|consen 372 WDLRMRSELYTIP-----------------------------------------------AHSNLVSQVKYSPQEGYFLV 404 (459)
T ss_pred eeecccccceecc-----------------------------------------------cccchhhheEecccCCeEEE
Confidence 9999877655543 3334688899998 44 788
Q ss_pred EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccce
Q 000410 1448 TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSI 1527 (1553)
Q Consensus 1448 Tgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I 1527 (1553)
|+|.|+++++|...+......+. ||.+.|
T Consensus 405 TasyD~t~kiWs~~~~~~~ksLa---------------------------------------------------GHe~kV 433 (459)
T KOG0272|consen 405 TASYDNTVKIWSTRTWSPLKSLA---------------------------------------------------GHEGKV 433 (459)
T ss_pred EcccCcceeeecCCCcccchhhc---------------------------------------------------CCccce
Confidence 99999999999987665554333 499999
Q ss_pred eEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1528 LSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1528 ~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.++ .+++++.+++|+|.|.+||+|.
T Consensus 434 ~s~-Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 434 ISL-DISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred EEE-EeccCCceEEEeccCceeeecc
Confidence 999 6999999999999999999995
No 46
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=1.4e-34 Score=343.23 Aligned_cols=248 Identities=21% Similarity=0.269 Sum_probs=194.9
Q ss_pred cceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
.+|++.+.||+|+||.||+|++. ++.||+|++...... .....+.+|+.+++.++||||+++++++.++...|+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 80 (303)
T cd07869 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE----GTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTL 80 (303)
T ss_pred ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc----ccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEE
Confidence 37999999999999999999986 467999998654211 112345578889999999999999999999999999
Q ss_pred EeccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||++++|.+++... +.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....+.
T Consensus 81 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 157 (303)
T cd07869 81 VFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS--- 157 (303)
T ss_pred EEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC---
Confidence 9999999999988654 568999999999999999999999999999999999999999999999999987542211
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-----HHHHHh--cC-
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-----LLAYRR--GQ- 253 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-----~~~~~~--~~- 253 (1553)
.......+++.|+|||++.+ ...++.++||||+||++|||++|.+||.... +..... +.
T Consensus 158 ----~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 224 (303)
T cd07869 158 ----HTYSNEVVTLWYRPPDVLLG---------STEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTP 224 (303)
T ss_pred ----ccCCCCcccCCCCChHHHcC---------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCC
Confidence 11233457889999998742 2357889999999999999999999996421 111110 00
Q ss_pred -------------CCCCC-------C----CCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 -------------YDPSQ-------H----LEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 -------------~~~~~-------~----~~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.+.. . +.. ..+..+++||.+||+.||++|||++|+++|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h 288 (303)
T cd07869 225 NEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSH 288 (303)
T ss_pred ChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcC
Confidence 00000 0 000 123568899999999999999999999998
No 47
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=9.8e-35 Score=347.42 Aligned_cols=243 Identities=17% Similarity=0.203 Sum_probs=197.5
Q ss_pred EEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc
Q 000410 31 EVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF 108 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~ 108 (1553)
+.||+|+||.||++++. +..||+|++.+... ........+.+|..+++.++||||+++++++..++..|+||||++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~ 78 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVI--IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN 78 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCC
Confidence 46999999999999985 36799999976411 112233456678899999999999999999999999999999999
Q ss_pred -CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 109 -NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 109 -gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
|+|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~-------~ 151 (323)
T cd05595 79 GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA-------T 151 (323)
T ss_pred CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC-------c
Confidence 69999998887899999999999999999999999999999999999999999999999998874321111 1
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCHH
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSG 267 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (1553)
.....|++.|+|||++. +..++.++|||||||++|||++|..||...+..............++...++.
T Consensus 152 ~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~ 221 (323)
T cd05595 152 MKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPE 221 (323)
T ss_pred cccccCCcCcCCccccc----------CCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHH
Confidence 12345789999999764 34678899999999999999999999865543333222222222344556789
Q ss_pred HHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 268 IRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 268 l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
++++|.+||+.||++|+ ++.++++|
T Consensus 222 ~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 222 AKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred HHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 99999999999999998 89999998
No 48
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=1.2e-34 Score=348.44 Aligned_cols=251 Identities=20% Similarity=0.246 Sum_probs=200.9
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-----CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-----~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~ 99 (1553)
+|++.+.||+|+||.||++++. +..||+|++.+... .......+.+..|..+++.+ +||||++++++++.++.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~ 79 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAAL-VQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAK 79 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHH-hhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCE
Confidence 4889999999999999999873 35699999975411 11223345567788899998 59999999999999999
Q ss_pred EEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
.|+||||++ |+|.+++..+..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~ 159 (332)
T cd05614 80 LHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE 159 (332)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC
Confidence 999999999 5999999888889999999999999999999999999999999999999999999999999987542211
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch----HHHHHHhcCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS----HLLAYRRGQY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~----~~~~~~~~~~ 254 (1553)
.. ......|++.|+|||.+.+ ...++.++|||||||++|||++|.+||... ....+.....
T Consensus 160 ~~------~~~~~~gt~~y~aPE~~~~---------~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~ 224 (332)
T cd05614 160 KE------RTYSFCGTIEYMAPEIIRG---------KGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRIL 224 (332)
T ss_pred CC------ccccccCCccccCHHHhcC---------CCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHh
Confidence 11 1113457899999998742 224678999999999999999999999532 1222222222
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
.....++...++.++++|.+||+.||++|| +++++++|
T Consensus 225 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 225 KCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred cCCCCCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 223334555678999999999999999999 88899998
No 49
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=344.17 Aligned_cols=247 Identities=25% Similarity=0.284 Sum_probs=210.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~~~~l 102 (1553)
.|++.+.||+|.||.||+|+++. +.+|+|++.|..... ......+.+|+.+|+++. ||||+.++++|++...+|+
T Consensus 36 ~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~--~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 36 KYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRG--KEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccc--cccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 68999999999999999999975 569999998873221 123456889999999998 9999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC----CcEEEeecCccccccCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW----NWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~----~~vkL~DFG~a~~~~~~ 177 (1553)
|||+|. |.|++++... .+++.++..++.|++.|++|||+.||+||||||||+|+... +.+|++|||+++....
T Consensus 114 vmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~- 191 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKP- 191 (382)
T ss_pred EEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccC-
Confidence 999999 6999999877 49999999999999999999999999999999999999754 4799999999986521
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHHHHhcC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRRGQ 253 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~~~~~~ 253 (1553)
...+.+.+||+.|+|||++. ...|+..+||||+|+++|.|++|.+||...+ ..++..+.
T Consensus 192 -------~~~~~~~~Gtp~y~APEvl~----------~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~ 254 (382)
T KOG0032|consen 192 -------GERLHTIVGTPEYVAPEVLG----------GRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGD 254 (382)
T ss_pred -------CceEeeecCCccccCchhhc----------CCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCC
Confidence 33456778999999999664 4578999999999999999999999996544 44566777
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 254 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 254 ~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+..........+..++++|.+||..||.+|+++.++|+|.
T Consensus 255 ~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~Hp 294 (382)
T KOG0032|consen 255 FDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQHP 294 (382)
T ss_pred CCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcCc
Confidence 7644433333467999999999999999999999999983
No 50
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-35 Score=361.84 Aligned_cols=257 Identities=21% Similarity=0.231 Sum_probs=212.1
Q ss_pred ccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEE-EEEe---
Q 000410 24 SYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQF-WQET--- 96 (1553)
Q Consensus 24 ~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~-~~~~--- 96 (1553)
.+++++.+.|.+|||+.||+|++.+ ..||+|.+... .+...+.+.+|+++|+.|. |||||.|++ ....
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-----de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~ 110 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-----DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSS 110 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-----CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccC
Confidence 4489999999999999999999965 46999998654 3556677899999999997 999999999 3321
Q ss_pred ---CCEEEEEecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCcEEEecCCcEEEeec
Q 000410 97 ---DKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKG--ICHGDIKCENVLVTSWNWLYLSDF 168 (1553)
Q Consensus 97 ---~~~~~lV~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~g--IvHrDIKp~NILv~~~~~vkL~DF 168 (1553)
...++|.||||. |.|-|++.++ ..|++.++++|+.|+++|+.+||... |||||||-|||||+.+|..|||||
T Consensus 111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDF 190 (738)
T KOG1989|consen 111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDF 190 (738)
T ss_pred CCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcc
Confidence 135789999999 6999999754 45999999999999999999999998 999999999999999999999999
Q ss_pred CccccccCCCCCCCCcceeee--cCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH
Q 000410 169 ASFKPTYIPYDDPSDFSFFFD--TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL 246 (1553)
Q Consensus 169 G~a~~~~~~~~~~~~~~~~~~--~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~ 246 (1553)
|.+.....+.....+..+.-+ ....|+.|+|||++. +..+.++++|+|||+|||+||-|+....||+....
T Consensus 191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMID-------lysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~ 263 (738)
T KOG1989|consen 191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMID-------LYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGK 263 (738)
T ss_pred cccccccCCCccHHHHHHHHHHHHhhCCccccChHHHh-------hhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcc
Confidence 998755444332222222111 112488999999985 45677899999999999999999999999998877
Q ss_pred HHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 247 LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.++..+.|..++. + ..+..+++||+.||+.||++||++.|++.++.
T Consensus 264 laIlng~Y~~P~~-p-~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~ 309 (738)
T KOG1989|consen 264 LAILNGNYSFPPF-P-NYSDRLKDLIRTMLQPNPDERPNIYQVLEEIF 309 (738)
T ss_pred eeEEeccccCCCC-c-cHHHHHHHHHHHHhccCcccCCCHHHHHHHHH
Confidence 8888888875442 2 33568999999999999999999999998754
No 51
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=8.3e-35 Score=348.16 Aligned_cols=244 Identities=18% Similarity=0.233 Sum_probs=198.6
Q ss_pred EEeeccCcEEEEEEEEC-----CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEec
Q 000410 31 EVLGGSRFFKSILCKHD-----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQ 105 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~-----~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E 105 (1553)
+.||+|+||.||+|+.. ++.||+|++.+.... ........+..|+.+++.++||||++++++++.++..|+|||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e 80 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIV-RNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE 80 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHH-hhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence 68999999999999863 356999999764111 112233456788899999999999999999999999999999
Q ss_pred ccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCc
Q 000410 106 YFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDF 184 (1553)
Q Consensus 106 ~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~ 184 (1553)
|+. ++|.+++...+.+.+..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----- 155 (323)
T cd05584 81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT----- 155 (323)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC-----
Confidence 999 59999998888899999999999999999999999999999999999999999999999999874321111
Q ss_pred ceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCC
Q 000410 185 SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIP 264 (1553)
Q Consensus 185 ~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 264 (1553)
......|++.|+|||++. +..++.++|||||||++|||++|.+||..................++...
T Consensus 156 --~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~~~ 223 (323)
T cd05584 156 --VTHTFCGTIEYMAPEILM----------RSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYL 223 (323)
T ss_pred --cccccCCCccccChhhcc----------CCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence 112345789999999764 33567899999999999999999999976654443332222233345556
Q ss_pred CHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 265 DSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 265 ~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
++.++++|.+||+.||++|| +++++++|
T Consensus 224 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 224 TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred CHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 78899999999999999999 89999988
No 52
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.5e-34 Score=348.50 Aligned_cols=251 Identities=20% Similarity=0.288 Sum_probs=196.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC-----C
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD-----K 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~-----~ 98 (1553)
+|++.+.||+|+||.||+|++.. ..||||++..... .......+.+|+++++.++||||+++++++... .
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 77 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFE---HVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK 77 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhc---cchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCc
Confidence 48999999999999999999863 6799999864311 112234567888999999999999999987543 3
Q ss_pred EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 99 AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 99 ~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
..|+||||++++|.+++.....+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 78 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 157 (338)
T cd07859 78 DIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDT 157 (338)
T ss_pred eEEEEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCcccccccccc
Confidence 58999999999999999888789999999999999999999999999999999999999999999999999987542221
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH---------
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY--------- 249 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~--------- 249 (1553)
.. ........|++.|+|||.+.+. ...++.++|||||||++|||++|++||........
T Consensus 158 ~~----~~~~~~~~~t~~y~aPE~~~~~--------~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~ 225 (338)
T cd07859 158 PT----AIFWTDYVATRWYRAPELCGSF--------FSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLG 225 (338)
T ss_pred Cc----cccccCCCCCCCcCCHHHHhcc--------ccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhC
Confidence 11 1122345678999999977421 24678899999999999999999999964332110
Q ss_pred ------------------HhcCC--CCC---CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 250 ------------------RRGQY--DPS---QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 250 ------------------~~~~~--~~~---~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..... .+. ..++ ..++.+.++|.+||+.||++||+++|+++|
T Consensus 226 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 226 TPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFP-NADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred CCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcC-CCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 00000 000 0112 235678999999999999999999999998
No 53
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-36 Score=313.25 Aligned_cols=257 Identities=22% Similarity=0.303 Sum_probs=201.1
Q ss_pred ccceEEEEEeeccCcEEEEEEEE--CCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe-----
Q 000410 24 SYNLVLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET----- 96 (1553)
Q Consensus 24 ~~~y~~~~~LG~G~fg~V~~a~~--~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~----- 96 (1553)
..+|.+.+.||.|||+.||++++ .++.||+|.+.... .+..+...+|++..++++||||++++++...
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~-----~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~ 94 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS-----QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDG 94 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc-----hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccC
Confidence 34899999999999999999986 45779999987652 3445567788899999999999998776532
Q ss_pred CCEEEEEecccc-CCHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCcEEEecCCcEEEeecC
Q 000410 97 DKAAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKG--ICHGDIKCENVLVTSWNWLYLSDFA 169 (1553)
Q Consensus 97 ~~~~~lV~E~~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~g--IvHrDIKp~NILv~~~~~vkL~DFG 169 (1553)
....||+++|+. |+|.|.+.. ..++++.++.+|+.+|++||++||+.. ++||||||.|||+++.+.++|.|||
T Consensus 95 ~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~G 174 (302)
T KOG2345|consen 95 KHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLG 174 (302)
T ss_pred ceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEecc
Confidence 345999999999 899998853 347999999999999999999999999 9999999999999999999999999
Q ss_pred ccccccCCCCCCCCcceeee--cCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-
Q 000410 170 SFKPTYIPYDDPSDFSFFFD--TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL- 246 (1553)
Q Consensus 170 ~a~~~~~~~~~~~~~~~~~~--~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~- 246 (1553)
++....+.-.+..+.....+ ....|..|+|||.|. +..+...++++|||||||++|+|+.|..||+..-.
T Consensus 175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~-------vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~ 247 (302)
T KOG2345|consen 175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFN-------VKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ 247 (302)
T ss_pred CccccceEeechHHHHHHHHHHHHhCCCcccCchhee-------cccCcccccccchhhhhHHHHHHHHcCCcchHHhhc
Confidence 98765443322222111111 123477899999996 34456789999999999999999999999973221
Q ss_pred -----HHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 247 -----LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 247 -----~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.+...+.+..+. ....++.+.++|+.||+.||.+||++.+++.+..
T Consensus 248 GgSlaLAv~n~q~s~P~--~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d 298 (302)
T KOG2345|consen 248 GGSLALAVQNAQISIPN--SSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLD 298 (302)
T ss_pred CCeEEEeeeccccccCC--CCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 112222232211 1235789999999999999999999999998854
No 54
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=3e-35 Score=343.67 Aligned_cols=260 Identities=17% Similarity=0.164 Sum_probs=209.8
Q ss_pred ccccCCCccceEEEEEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe
Q 000410 17 YLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET 96 (1553)
Q Consensus 17 ~~~~l~~~~~y~~~~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~ 96 (1553)
+.-+++.. ++.+.+.||+|+||+||+|++.+ .||||++...... .+..+.|+.|+..+++-+|.||+-|.+++..
T Consensus 385 ~~WeIp~~-ev~l~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt---~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 385 EEWEIPPE-EVLLGERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPT---PEQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred cccccCHH-Hhhccceeccccccceeeccccc-ceEEEEEecCCCC---HHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 33344432 67889999999999999999874 5999999776432 3467889999999999999999999999988
Q ss_pred CCEEEEEeccccC-CHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccc
Q 000410 97 DKAAYLLRQYFFN-SLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174 (1553)
Q Consensus 97 ~~~~~lV~E~~~g-sL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~ 174 (1553)
+.. .||+++|+| +||.+|... ..+.....+.|++||++|+.|||.++|||||||..||++.+++.|||+|||++...
T Consensus 460 p~~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk 538 (678)
T KOG0193|consen 460 PPL-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVK 538 (678)
T ss_pred Cce-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeee
Confidence 876 999999997 999999753 45899999999999999999999999999999999999999999999999998543
Q ss_pred cCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----H
Q 000410 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----R 250 (1553)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~ 250 (1553)
..- .-..-+....|..+|||||++.. ....+|++.+||||||||+|||++|..||......++ -
T Consensus 539 ~~w-----~g~~q~~qp~gsilwmAPEvIRm-------qd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVG 606 (678)
T KOG0193|consen 539 TRW-----SGEQQLEQPHGSLLWMAPEVIRM-------QDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVG 606 (678)
T ss_pred eee-----ccccccCCCccchhhhcHHHHhh-------cccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEec
Confidence 211 11122345567899999999973 2367899999999999999999999999975444332 2
Q ss_pred hcCCCCCC-CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 251 RGQYDPSQ-HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 251 ~~~~~~~~-~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+|...+.. .......+++++|+..||..++++||.+.++|..++
T Consensus 607 rG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~ 651 (678)
T KOG0193|consen 607 RGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLE 651 (678)
T ss_pred ccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHH
Confidence 33223322 222334468999999999999999999999998754
No 55
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.7e-35 Score=345.13 Aligned_cols=278 Identities=22% Similarity=0.255 Sum_probs=230.2
Q ss_pred CCccceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE
Q 000410 22 PSSYNLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 22 ~~~~~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~ 99 (1553)
.....|.+.+.||+|.|++|.++++. ++.||||++.|.. .+ ....+.+.+|+++|+.++||||++++.++++...
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~--ln-~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~ 129 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQ--LN-PSKRQKLGREVDIMKSLNHPNIVKLFSVIETEAT 129 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcc--cC-hHHHHHHHHHHHHHHhcCCcceeeeeeeeeecce
Confidence 33447999999999999999999996 4679999997762 12 2333448889999999999999999999999999
Q ss_pred EEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
+|+||||+. |.+++++.+.+.+.+.+++.++.|+++|++|||+++|||||||.+|||++.+..+||+|||++...
T Consensus 130 lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~---- 205 (596)
T KOG0586|consen 130 LYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFF---- 205 (596)
T ss_pred eEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceee----
Confidence 999999999 699999999999999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQ 258 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~ 258 (1553)
+...+..+.+|++.|.|||+|.+..+ .++++|+||+|+++|.|+.|..||++..+...+........
T Consensus 206 ----~~~~~lqt~cgsppyAaPEl~~g~~y---------~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~ 272 (596)
T KOG0586|consen 206 ----DYGLMLQTFCGSPPYAAPELFNGKKY---------DGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKY 272 (596)
T ss_pred ----cccccccccCCCCCccChHhhcCccc---------CCcceehhhhhhhheeeeecccccCCcccccccchheeeee
Confidence 23445678899999999999986543 47899999999999999999999999888776655544444
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh-cccCCCCCCchhhhhhccCCCCCCcchh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA-AVVFPTYFSPFLHNFYCCWNPLHSDMRV 322 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~-~~~fP~~f~~fl~~~~~~~~~~~~~~r~ 322 (1553)
.++...+.+++++|++||..+|.+|++++++.+|.| ...+.. ..+.++.....+.....|+
T Consensus 273 rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~~~---~~l~p~~e~~~~~~~~~r~ 334 (596)
T KOG0586|consen 273 RIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLLEA---RLLAPLIERSTPFILAKRI 334 (596)
T ss_pred cccceeechhHHHHHHhhccCccccCCHHHhhhhcccchhhhh---hhhhcccccCccchhhHHH
Confidence 455555678999999999999999999999999855 333332 3444455443444444444
No 56
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.5e-35 Score=346.59 Aligned_cols=247 Identities=22% Similarity=0.269 Sum_probs=210.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE-EEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA-AYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~-~~l 102 (1553)
+|.+++.+|+|+||.+++++++. ..+|+|.+....... ...+....|..+++++.||||+.|.+.|+.++. .+|
T Consensus 5 ~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~---~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~I 81 (426)
T KOG0589|consen 5 NYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTE---PERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCI 81 (426)
T ss_pred hhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCc---hhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEE
Confidence 68899999999999999999875 569999987653222 222356678899999999999999999988887 999
Q ss_pred Eecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCC
Q 000410 103 LRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~ 179 (1553)
||+||+ |+|.+.|.+. ..++++.+.+|+.|++.||.|||+++|+|||||+.||+++.++.|+|+|||+||....+.
T Consensus 82 vm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~- 160 (426)
T KOG0589|consen 82 VMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED- 160 (426)
T ss_pred EEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCch-
Confidence 999999 5999999654 458999999999999999999999999999999999999999999999999999763221
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCC-C
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPS-Q 258 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~-~ 258 (1553)
.+..+..||+.|+.||++. +.+|+.|+|||||||++|||++-+++|...+...+........ .
T Consensus 161 ------~~a~tvvGTp~YmcPEil~----------d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~ 224 (426)
T KOG0589|consen 161 ------SLASTVVGTPYYMCPEILS----------DIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYS 224 (426)
T ss_pred ------hhhheecCCCcccCHHHhC----------CCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCC
Confidence 1335678999999999764 5689999999999999999999999999888766544333322 3
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.++...+.+++.||..||..+|..||++.++|.+
T Consensus 225 Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 225 PLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred CCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 4566677899999999999999999999999987
No 57
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3.3e-34 Score=336.82 Aligned_cols=246 Identities=17% Similarity=0.183 Sum_probs=197.1
Q ss_pred eEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|+..+.||+|+||.||+|.+. +..||+|++.+... ........+.+|..+++.++|+||+++++++.+++..|+||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~ 79 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI--KKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhh--hhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEE
Confidence 788999999999999999875 46799999865421 11223345667889999999999999999999999999999
Q ss_pred cccc-CCHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ |+|.+++.. ...+++.++..++.|++.||+|||++||+||||||+|||+++++.++|+|||++.......
T Consensus 80 e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 156 (285)
T cd05631 80 TIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE--- 156 (285)
T ss_pred EecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC---
Confidence 9999 699888753 3358999999999999999999999999999999999999999999999999987541110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HHHHhcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~~~~~~~~~~ 257 (1553)
......|++.|+|||.+. +..++.++||||+||++|||++|++||..... ..+........
T Consensus 157 -----~~~~~~g~~~y~aPE~~~----------~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 221 (285)
T cd05631 157 -----TVRGRVGTVGYMAPEVIN----------NEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQ 221 (285)
T ss_pred -----eecCCCCCCCccCHhhhc----------CCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhccc
Confidence 112345788999999764 34678899999999999999999999975321 22222222222
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 292 (1553)
...+...++.+.+||.+||+.||++||+ ++++++|
T Consensus 222 ~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 222 EEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred ccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 2344445678999999999999999997 8999988
No 58
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.2e-34 Score=350.65 Aligned_cols=254 Identities=18% Similarity=0.190 Sum_probs=201.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||+||+|++.. +.||||++.+... ........+.+|+.+++.++||||+++++++.++...|+|
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 79 (364)
T cd05599 2 DFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM--LEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLI 79 (364)
T ss_pred CceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEE
Confidence 68999999999999999999863 6799999976411 1123445677889999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ |+|.+++..++.+++.+++.++.||+.||+|||++||+||||||+|||++.+|.++|+|||+++..........
T Consensus 80 ~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~ 159 (364)
T cd05599 80 MEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEF 159 (364)
T ss_pred ECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceeccccccccc
Confidence 99998 69999998888899999999999999999999999999999999999999999999999999875422111000
Q ss_pred Cc-------------------------------ceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHH
Q 000410 183 DF-------------------------------SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVI 231 (1553)
Q Consensus 183 ~~-------------------------------~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il 231 (1553)
.. .....+..||+.|+|||++. ...++.++|||||||++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlG~il 229 (364)
T cd05599 160 YRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFL----------QTGYNKECDWWSLGVIM 229 (364)
T ss_pred cccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHc----------CCCCCCeeeeecchhHH
Confidence 00 00111245899999999774 34578899999999999
Q ss_pred HHHHcCCCCCCchHHHHH----HhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCC---HHHHHHh
Q 000410 232 AELFLEVPFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS---AESYLQN 292 (1553)
Q Consensus 232 ~eLltg~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rps---a~elL~~ 292 (1553)
|||++|.+||........ ...............++.+++||.+||. +|.+|++ ++|+++|
T Consensus 230 ~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 230 YEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred HHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 999999999975543322 1111111111111346789999999997 9999998 9999998
No 59
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=1.7e-34 Score=347.13 Aligned_cols=245 Identities=19% Similarity=0.200 Sum_probs=201.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++.. ..||+|++.+... ........+..|+++++.++||||++++++++.+...|+|
T Consensus 2 ~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv 79 (333)
T cd05600 2 DFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLL--FKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLA 79 (333)
T ss_pred CcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHH--hhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEE
Confidence 68999999999999999999864 6799999976411 1123345677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ |+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 80 ~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~------ 153 (333)
T cd05600 80 MEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT------ 153 (333)
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc------
Confidence 99998 59999998888899999999999999999999999999999999999999999999999999875421
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----HhcCCCC-C
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQYDP-S 257 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~~~~-~ 257 (1553)
......|++.|+|||.+. +..++.++|||||||++|||++|.+||........ ....... .
T Consensus 154 ----~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~ 219 (333)
T cd05600 154 ----YANSVVGSPDYMAPEVLR----------GKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQR 219 (333)
T ss_pred ----ccCCcccCccccChhHhc----------CCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccC
Confidence 123445789999999764 34678899999999999999999999976543322 2111110 1
Q ss_pred CCCC---CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLE---KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~---~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+... ...++++.++|.+||..+|.+||+++++++|
T Consensus 220 ~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 220 PVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 1111 1336789999999999999999999999998
No 60
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=8.5e-35 Score=326.82 Aligned_cols=269 Identities=24% Similarity=0.256 Sum_probs=209.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|++.+.||+|.-|+||+|+..+ ..+|+||+.|. ......-..+.+.|.+||+.++||.++.+|..|++++..|++
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~--~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKE--SLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHH--HHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 57788999999999999999987 56999999876 222344456778888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccC-C--
Q 000410 104 RQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI-P-- 177 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~-~-- 177 (1553)
||||+ |+|....++++ .+++..++.++.+++.||+|||..|||+||||||||||-++|++.|+||.++..... |
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~ 235 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTL 235 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCee
Confidence 99999 59999887654 599999999999999999999999999999999999999999999999987643211 0
Q ss_pred --CCC--------------CCCcc------------------------------eeeecCCCCccccCcchhcccCCccc
Q 000410 178 --YDD--------------PSDFS------------------------------FFFDTGGKRLCYLAPERFYEHGGEMQ 211 (1553)
Q Consensus 178 --~~~--------------~~~~~------------------------------~~~~~~~gt~~Y~APE~~~~~~~~~~ 211 (1553)
... +..|. .......||-.|+|||++.+
T Consensus 236 ~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G------ 309 (459)
T KOG0610|consen 236 VKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG------ 309 (459)
T ss_pred eccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeec------
Confidence 000 00000 11123457888999997764
Q ss_pred cccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCC--CCCHHHHHHHHHhcccCcCCCCC----
Q 000410 212 VAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK--IPDSGIRKMILHMIQLEPELRFS---- 285 (1553)
Q Consensus 212 ~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~LI~~mL~~dP~~Rps---- 285 (1553)
...+.++|.|+||+++|||+.|..||.+.+-.+-..........++. ..+..+++||+++|.+||.+|..
T Consensus 310 ----~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rG 385 (459)
T KOG0610|consen 310 ----EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRG 385 (459)
T ss_pred ----CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccc
Confidence 45678999999999999999999999876554433333322222222 33468999999999999999997
Q ss_pred HHHHHHhhhcccCCCCCCchhhhhhccC
Q 000410 286 AESYLQNYAAVVFPTYFSPFLHNFYCCW 313 (1553)
Q Consensus 286 a~elL~~~~~~~fP~~f~~fl~~~~~~~ 313 (1553)
|+||-+| ++|...-+..+...
T Consensus 386 A~eIK~H-------pFF~gVnWaLir~~ 406 (459)
T KOG0610|consen 386 AAEIKRH-------PFFEGVNWALIRCA 406 (459)
T ss_pred hHHhhcC-------ccccCCChhheecc
Confidence 9999988 55655434444433
No 61
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=8.9e-35 Score=352.20 Aligned_cols=254 Identities=19% Similarity=0.257 Sum_probs=202.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++. ++.||+|++.+... ........+.+|.+++..++||||+++++++.+++..|+|
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (350)
T cd05573 2 DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDM--IKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLV 79 (350)
T ss_pred CceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHH--hhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEE
Confidence 6899999999999999999997 56799999976411 1123345677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC-
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP- 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~- 181 (1553)
|||++ ++|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.........
T Consensus 80 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~ 159 (350)
T cd05573 80 MEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREY 159 (350)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccc
Confidence 99998 6999999888889999999999999999999999999999999999999999999999999987653322000
Q ss_pred ---------------------CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCC
Q 000410 182 ---------------------SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 240 (1553)
Q Consensus 182 ---------------------~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 240 (1553)
...........|++.|+|||++. +..++.++|||||||++|||++|.+|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlG~il~ell~g~~P 229 (350)
T cd05573 160 YLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLR----------GTPYGLECDWWSLGVILYEMLYGFPP 229 (350)
T ss_pred cccccccccccccccccccccccccccccccccCccccCHHHHc----------CCCCCCceeeEecchhhhhhccCCCC
Confidence 00011123445789999999775 33678999999999999999999999
Q ss_pred CCchHHHHHHhcCCC--CCCCCCC--CCCHHHHHHHHHhcccCcCCCCC-HHHHHHh
Q 000410 241 FELSHLLAYRRGQYD--PSQHLEK--IPDSGIRKMILHMIQLEPELRFS-AESYLQN 292 (1553)
Q Consensus 241 f~~~~~~~~~~~~~~--~~~~~~~--~~~~~l~~LI~~mL~~dP~~Rps-a~elL~~ 292 (1553)
|.............. ....++. ..++.+++||.+||. ||.+||+ ++++++|
T Consensus 230 f~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 230 FYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 975543222111111 1111222 246889999999997 9999999 9999998
No 62
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=3.6e-34 Score=342.91 Aligned_cols=248 Identities=17% Similarity=0.171 Sum_probs=198.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCC-CeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHP-HVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hp-nIv~~~~~~~~~~~~~l 102 (1553)
+|++.+.||+|+||.||+|++.+ +.||+|++.+... ......+.+..|.+++..+.|+ +|+++++++.+.+..|+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l 78 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVI--IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 78 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEE
Confidence 58899999999999999999865 5699999976421 1122234456677788888764 58889999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||++ |+|.+++...+.+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~-- 156 (324)
T cd05587 79 VMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGK-- 156 (324)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCC--
Confidence 999998 69999998888899999999999999999999999999999999999999999999999998864321111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~ 261 (1553)
......|++.|+|||++. +..++.++||||+||++|||++|++||..................++
T Consensus 157 -----~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~ 221 (324)
T cd05587 157 -----TTRTFCGTPDYIAPEIIA----------YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP 221 (324)
T ss_pred -----ceeeecCCccccChhhhc----------CCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 122345789999999764 34578899999999999999999999976554333322222233345
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCH-----HHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSA-----ESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 292 (1553)
...++.+.++|.+||..||.+|+++ +++++|
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 257 (324)
T cd05587 222 KSLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREH 257 (324)
T ss_pred CCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 5567899999999999999999976 677777
No 63
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.2e-34 Score=343.90 Aligned_cols=243 Identities=20% Similarity=0.220 Sum_probs=195.2
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||.||+|++.. +.||+|++.+... ......+.+..|..++..+ +||||+++++++++.+..|+||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~ 78 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVI--LQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFV 78 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHH--hhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCC
Confidence 469999999999999864 5799999975411 1112233444555666655 7999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ |+|.+++.....+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 ~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~------- 151 (320)
T cd05590 79 NGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK------- 151 (320)
T ss_pred CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC-------
Confidence 9 59999998877899999999999999999999999999999999999999999999999999875321111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCH
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDS 266 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (1553)
......|++.|+|||++. +..++.++|||||||++|||++|.+||.......+...........+...+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 221 (320)
T cd05590 152 TTSTFCGTPDYIAPEILQ----------EMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTWLSQ 221 (320)
T ss_pred cccccccCccccCHHHHc----------CCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCCCCCH
Confidence 122345789999999774 3457889999999999999999999997665544433333333334555678
Q ss_pred HHHHHHHHhcccCcCCCCCH------HHHHHh
Q 000410 267 GIRKMILHMIQLEPELRFSA------ESYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rpsa------~elL~~ 292 (1553)
.++++|.+||+.||++||++ +++++|
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h 253 (320)
T cd05590 222 DAVDILKAFMTKNPTMRLGSLTLGGEEAILRH 253 (320)
T ss_pred HHHHHHHHHcccCHHHCCCCCCCCCHHHHHcC
Confidence 99999999999999999998 778877
No 64
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=2e-34 Score=345.03 Aligned_cols=244 Identities=21% Similarity=0.261 Sum_probs=191.8
Q ss_pred EEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc
Q 000410 31 EVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF 108 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~ 108 (1553)
+.||+|+||+||+|++. ++.||+|++.+.... ........+.++..+++.++||||+++++.++++...|+||||+.
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 79 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAIL-KKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVN 79 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh-hhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCC
Confidence 46999999999999985 367999999764211 111222223333345678999999999999999999999999999
Q ss_pred -CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 109 -NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 109 -gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
|+|.+++..++.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 80 ~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~-------~ 152 (323)
T cd05575 80 GGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSK-------T 152 (323)
T ss_pred CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCC-------c
Confidence 59999998888899999999999999999999999999999999999999999999999999875322111 1
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCHH
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSG 267 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (1553)
.....|++.|+|||++. +..++.++|||||||++|||++|.+||...+..............++...++.
T Consensus 153 ~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 222 (323)
T cd05575 153 TSTFCGTPEYLAPEVLR----------KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKPNISVS 222 (323)
T ss_pred cccccCChhhcChhhhc----------CCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCHH
Confidence 12345789999999764 34678899999999999999999999976554443322222222233344678
Q ss_pred HHHHHHHhcccCcCCCCCH----HHHHHh
Q 000410 268 IRKMILHMIQLEPELRFSA----ESYLQN 292 (1553)
Q Consensus 268 l~~LI~~mL~~dP~~Rpsa----~elL~~ 292 (1553)
+.++|.+||+.||.+||++ .++++|
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~~~il~~ 251 (323)
T cd05575 223 ARHLLEGLLQKDRTKRLGAKDDFLEIKNH 251 (323)
T ss_pred HHHHHHHHhhcCHHhCCCCCCCHHHHHcC
Confidence 9999999999999999988 577766
No 65
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3.2e-34 Score=337.71 Aligned_cols=246 Identities=21% Similarity=0.224 Sum_probs=187.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC---CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHh---cCCCCCeeEEEEEEE----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD---EGLVLVKVYFKRGDYIDLREYERRLFHIRETFR---SIDHPHVWAFQFWQE---- 95 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~---~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~---~l~hpnIv~~~~~~~---- 95 (1553)
+|++.+.||+|+||+||+|++. +..||+|++......... ...+.+|..+++ .++||||+++++++.
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~ 78 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM---PLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 78 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCc---hHHHHHHHHHHHhhcccCCCCcceEEEEEecccC
Confidence 6889999999999999999873 245999998654221111 112233444444 457999999999875
Q ss_pred -eCCEEEEEeccccCCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccc
Q 000410 96 -TDKAAYLLRQYFFNSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 96 -~~~~~~lV~E~~~gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~ 172 (1553)
.....++||||+.++|.+++... ..+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus 79 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T cd07862 79 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR 158 (290)
T ss_pred CCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceE
Confidence 34568999999999999998653 348999999999999999999999999999999999999999999999999987
Q ss_pred cccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HH
Q 000410 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LA 248 (1553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~ 248 (1553)
..... .......|++.|+|||.+. ...++.++|||||||++|||++|.+||..... ..
T Consensus 159 ~~~~~--------~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~ 220 (290)
T cd07862 159 IYSFQ--------MALTSVVVTLWYRAPEVLL----------QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGK 220 (290)
T ss_pred eccCC--------cccccccccccccChHHHh----------CCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHH
Confidence 54211 1123445788999999774 33578899999999999999999999975432 11
Q ss_pred HHhcCC-CCC----------------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 YRRGQY-DPS----------------------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 ~~~~~~-~~~----------------------~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+..... ... ..+....++.+++||.+||+.||++|||+.|+|+|
T Consensus 221 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~h 287 (290)
T cd07862 221 ILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 287 (290)
T ss_pred HHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcC
Confidence 111100 000 00111235678999999999999999999999998
No 66
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.5e-34 Score=338.08 Aligned_cols=248 Identities=21% Similarity=0.355 Sum_probs=194.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++.+ ..||+|++..... .....+.+.+|+.+++.++||||++++++++.++..|+|
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (287)
T cd07848 2 KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEE---NEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLV 78 (287)
T ss_pred CceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccc---cccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEE
Confidence 68999999999999999999964 5699999875421 123345667788999999999999999999999999999
Q ss_pred eccccCCHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLS-TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~-~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+++++.+.+. ....+++..++.++.||+.||.|||++||+||||||+||+++.++.+||+|||++........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 155 (287)
T cd07848 79 FEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN--- 155 (287)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc---
Confidence 9999976555554 345689999999999999999999999999999999999999999999999999875421111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH----HHHhc------
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----AYRRG------ 252 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~----~~~~~------ 252 (1553)
.......|++.|+|||.+. +..++.++||||+||++|||++|++||...... .+...
T Consensus 156 ---~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 222 (287)
T cd07848 156 ---ANYTEYVATRWYRSPELLL----------GAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPA 222 (287)
T ss_pred ---ccccccccccccCCcHHHc----------CCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCH
Confidence 0112345788899999774 335788999999999999999999999643211 11100
Q ss_pred ----------CCC----CC--------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 ----------QYD----PS--------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ----------~~~----~~--------~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+. +. .......+..+.+||.+||+.||++|||++|+|+|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~h 284 (287)
T cd07848 223 EQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNH 284 (287)
T ss_pred HHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 000 00 00111245679999999999999999999999998
No 67
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=1.4e-34 Score=346.58 Aligned_cols=243 Identities=18% Similarity=0.206 Sum_probs=197.7
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF 108 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~ 108 (1553)
+.||+|+||+||+|++.. ..||+|++.+... ........+..|.++++.++||||+++++++..+...|+||||++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~ 78 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVI--VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 78 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCC
Confidence 469999999999999853 6799999976421 112233455677889999999999999999999999999999999
Q ss_pred -CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 109 -NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 109 -gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
|+|.+++.....+++.+++.++.||+.||.|||+ +||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~------- 151 (325)
T cd05594 79 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA------- 151 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc-------
Confidence 5999999887789999999999999999999997 8999999999999999999999999999874321111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCH
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDS 266 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (1553)
......|++.|+|||++. +..++.++|||||||++|||++|..||..................++...++
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~ 221 (325)
T cd05594 152 TMKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSP 221 (325)
T ss_pred ccccccCCcccCCHHHHc----------cCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCCCCCH
Confidence 112345789999999774 3467889999999999999999999997655443333222222334555678
Q ss_pred HHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 267 GIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
.+.++|.+||+.||++|+ ++.++++|
T Consensus 222 ~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 222 EAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred HHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 999999999999999997 89999998
No 68
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=2.7e-34 Score=346.24 Aligned_cols=248 Identities=17% Similarity=0.196 Sum_probs=193.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~ 97 (1553)
+|++.+.||+|+||.||+|.+. +..||+|++.... .......+.+|..+++.+ +||||+++++++...
T Consensus 8 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 8 RLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA----TASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred HceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc----chHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 7999999999999999999752 1459999986431 122345677888999999 899999999987654
Q ss_pred -CEEEEEecccc-CCHHHHhcCC---------------------------------------------------------
Q 000410 98 -KAAYLLRQYFF-NSLRDRLSTP--------------------------------------------------------- 118 (1553)
Q Consensus 98 -~~~~lV~E~~~-gsL~d~l~~~--------------------------------------------------------- 118 (1553)
..+|+||||++ |+|.+++...
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 46899999999 6999988642
Q ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceeeecCCC
Q 000410 119 -----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGK 193 (1553)
Q Consensus 119 -----~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~g 193 (1553)
..+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ........+
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~-----~~~~~~~~~ 238 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YVRKGSARL 238 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcc-----hhcccCCCC
Confidence 2377888999999999999999999999999999999999999999999999875421110 011123345
Q ss_pred CccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHH----HHHHhcCCCCCCCCCCCCCHHH
Q 000410 194 RLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHL----LAYRRGQYDPSQHLEKIPDSGI 268 (1553)
Q Consensus 194 t~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~l 268 (1553)
++.|+|||.+. +..++.++|||||||++|||++ |.+||..... ....... .....+...++.+
T Consensus 239 ~~~y~aPE~~~----------~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l 306 (338)
T cd05102 239 PLKWMAPESIF----------DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDG--TRMRAPENATPEI 306 (338)
T ss_pred CccccCcHHhh----------cCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcC--CCCCCCCCCCHHH
Confidence 67899999764 3467889999999999999997 8999975321 1111111 1122344556789
Q ss_pred HHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 269 RKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 269 ~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+++|.+||+.||++||++.|+++.++
T Consensus 307 ~~li~~cl~~dp~~RPs~~el~~~l~ 332 (338)
T cd05102 307 YRIMLACWQGDPKERPTFSALVEILG 332 (338)
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHH
Confidence 99999999999999999999998865
No 69
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=3.5e-34 Score=350.25 Aligned_cols=241 Identities=20% Similarity=0.205 Sum_probs=190.9
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
.+|++.+.||+|+||.||+|.+.. +.||+|+... ..+.+|+++++.++||||+++++++..+...++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~l 160 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCL 160 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-----------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEE
Confidence 379999999999999999999864 6699996422 235678899999999999999999999999999
Q ss_pred EeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 103 LRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 103 V~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|+|++.++|.+++..+..+++.+++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 161 v~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~--- 237 (391)
T PHA03212 161 ILPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA--- 237 (391)
T ss_pred EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc---
Confidence 99999999999998877899999999999999999999999999999999999999999999999999864311110
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCC-CCch----------HHHHHHh
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF-FELS----------HLLAYRR 251 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p-f~~~----------~~~~~~~ 251 (1553)
.......||+.|+|||++. +..++.++|||||||++|||++|.+| |... .+..+..
T Consensus 238 ---~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~ 304 (391)
T PHA03212 238 ---NKYYGWAGTIATNAPELLA----------RDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIR 304 (391)
T ss_pred ---cccccccCccCCCChhhhc----------CCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHH
Confidence 0112345899999999764 34678999999999999999999654 4211 1111100
Q ss_pred --cC------------------------CC-C--CCCCCC--CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 --GQ------------------------YD-P--SQHLEK--IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 --~~------------------------~~-~--~~~~~~--~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+. .. + .+.+.. ..+.++.+||.+||+.||++||||+|+|+|
T Consensus 305 ~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 305 RSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred HhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00 00 0 000000 123578999999999999999999999998
No 70
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=9.9e-34 Score=344.48 Aligned_cols=254 Identities=20% Similarity=0.197 Sum_probs=197.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+... ........+.+|+.++..++||||+++++.+++....|+|
T Consensus 2 ~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv 79 (363)
T cd05628 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM--LEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLI 79 (363)
T ss_pred CceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHH--HHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEE
Confidence 68999999999999999998864 6799999976411 1223445678888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC--
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD-- 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~-- 180 (1553)
|||++ |+|.+++..++.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~ 159 (363)
T cd05628 80 MEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEF 159 (363)
T ss_pred EcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCcccccccccccc
Confidence 99998 599999988888999999999999999999999999999999999999999999999999998754211000
Q ss_pred --------CCCcc------------------eeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHH
Q 000410 181 --------PSDFS------------------FFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 234 (1553)
Q Consensus 181 --------~~~~~------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 234 (1553)
+.++. .......||+.|+|||++. +..++.++|||||||++|||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~----------~~~~~~~~DvwSlGvil~el 229 (363)
T cd05628 160 YRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFM----------QTGYNKLCDWWSLGVIMYEM 229 (363)
T ss_pred cccccccccccccccccccccccchhhhccccccccccCCccccCHHHHc----------CCCCCCchhhhhhHHHHHHH
Confidence 00000 0012346899999999874 34578899999999999999
Q ss_pred HcCCCCCCchHHHHH----HhcCCCCCCCCCCCCCHHHHHHHHHhcccCcC---CCCCHHHHHHh
Q 000410 235 FLEVPFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPE---LRFSAESYLQN 292 (1553)
Q Consensus 235 ltg~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~---~Rpsa~elL~~ 292 (1553)
++|.+||........ ...............++.++++|.+|+. +|. .||+++|+++|
T Consensus 230 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 230 LIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTN 293 (363)
T ss_pred HhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCC
Confidence 999999975443322 2111111100011235789999999875 444 45899999998
No 71
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=5.2e-34 Score=341.52 Aligned_cols=246 Identities=19% Similarity=0.205 Sum_probs=194.6
Q ss_pred eEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHH---HhcCCCCCeeEEEEEEEeCCEEE
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRET---FRSIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~---l~~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
|++.+.||+|+||.||+|.+.. +.||||++.+... ......+.+..|.++ ++.++||||+++++++++.+..|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~ 78 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDI--IARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVC 78 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEE
Confidence 6789999999999999998863 6799999976421 111223345555444 45678999999999999999999
Q ss_pred EEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+||||++ ++|..++.. ..+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~- 156 (324)
T cd05589 79 FVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGD- 156 (324)
T ss_pred EEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCC-
Confidence 9999999 599888865 4599999999999999999999999999999999999999999999999998864321111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHL 260 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~ 260 (1553)
...+..|++.|+|||.+. +..++.++|||||||++|||++|.+||...................
T Consensus 157 ------~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~ 220 (324)
T cd05589 157 ------RTSTFCGTPEFLAPEVLT----------ETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRY 220 (324)
T ss_pred ------cccccccCccccCHhHhc----------CCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 112445789999999764 3457889999999999999999999997655443322222222234
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
+...++.+.++|.+||+.||.+|| ++.++++|
T Consensus 221 p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~ 257 (324)
T cd05589 221 PRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQ 257 (324)
T ss_pred CCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhC
Confidence 445578899999999999999999 68888887
No 72
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=5.1e-34 Score=341.42 Aligned_cols=248 Identities=17% Similarity=0.162 Sum_probs=197.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~l 102 (1553)
+|.+.+.||+|+||.||+|++.+ ..||+|++.+... ......+....|..++..+ +||+|+++++++.+.+..|+
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l 78 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVV--IQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYF 78 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEE
Confidence 57889999999999999999865 5699999976421 1122223344555666665 58999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||++ |+|.+++...+.+++.++..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~--- 155 (323)
T cd05616 79 VMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG--- 155 (323)
T ss_pred EEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC---
Confidence 999998 6999999887789999999999999999999999999999999999999999999999999987432111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~ 261 (1553)
.......|++.|+|||++. ...++.++|||||||++|||++|.+||..................++
T Consensus 156 ----~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p 221 (323)
T cd05616 156 ----VTTKTFCGTPDYIAPEIIA----------YQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP 221 (323)
T ss_pred ----CccccCCCChhhcCHHHhc----------CCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 1122345789999999774 34678999999999999999999999976554333222222222344
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCH-----HHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSA-----ESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 292 (1553)
...++++.++|.+||+.||.+|+++ .++++|
T Consensus 222 ~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05616 222 KSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 257 (323)
T ss_pred CcCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcC
Confidence 5567899999999999999999984 677766
No 73
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=4.4e-34 Score=340.75 Aligned_cols=243 Identities=16% Similarity=0.187 Sum_probs=193.0
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhc-CCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRS-IDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~-l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||.||+|++.. ..||+|++.+.... .......+..|..++.. .+||||+++++++.+++..|+||||+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~ 78 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVL--IDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFL 78 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh--hcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCC
Confidence 479999999999999864 57999999764211 11122334445556654 58999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
. |+|.+++..++.+++.++..++.||+.||+|||++||+||||||+|||++.++.++|+|||+++.......
T Consensus 79 ~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------- 151 (316)
T cd05620 79 NGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDN------- 151 (316)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCC-------
Confidence 9 59999998887899999999999999999999999999999999999999999999999998864321111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCH
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDS 266 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (1553)
......|++.|+|||.+. +..++.++||||+||++|||++|.+||..................++...+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (316)
T cd05620 152 RASTFCGTPDYIAPEILQ----------GLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPRWITK 221 (316)
T ss_pred ceeccCCCcCccCHHHHc----------CCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCCH
Confidence 123445789999999774 3467889999999999999999999997655443333222223334555678
Q ss_pred HHHHHHHHhcccCcCCCCCH-HHHHHh
Q 000410 267 GIRKMILHMIQLEPELRFSA-ESYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rpsa-~elL~~ 292 (1553)
+++++|.+||+.||++||++ +++++|
T Consensus 222 ~~~~li~~~l~~dP~~R~~~~~~~~~h 248 (316)
T cd05620 222 ESKDILEKLFERDPTRRLGVVGNIRGH 248 (316)
T ss_pred HHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 99999999999999999998 577777
No 74
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=4e-34 Score=341.99 Aligned_cols=243 Identities=19% Similarity=0.207 Sum_probs=195.5
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||.||+|++.+ ..||+|++.+... ......+.+..|.+++..+ +||||+++++++++++..|+||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~ 78 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVI--LQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYV 78 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHh--hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCC
Confidence 469999999999999864 5799999976411 1122233455566777655 7999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ |+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~------- 151 (321)
T cd05591 79 NGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV------- 151 (321)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCc-------
Confidence 9 59999998877899999999999999999999999999999999999999999999999998875322111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCH
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDS 266 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (1553)
......|++.|+|||++. +..++.++|||||||++|||++|.+||...................+...+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~ 221 (321)
T cd05591 152 TTTTFCGTPDYIAPEILQ----------ELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYPVWLSK 221 (321)
T ss_pred cccccccCccccCHHHHc----------CCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCH
Confidence 112345788999999764 3467889999999999999999999997665444333322222334445678
Q ss_pred HHHHHHHHhcccCcCCCC-------CHHHHHHh
Q 000410 267 GIRKMILHMIQLEPELRF-------SAESYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rp-------sa~elL~~ 292 (1553)
++.++|.+||+.||++|+ +++++++|
T Consensus 222 ~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 222 EAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred HHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 999999999999999999 89999988
No 75
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=6.3e-34 Score=339.38 Aligned_cols=243 Identities=17% Similarity=0.206 Sum_probs=192.1
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhc-CCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRS-IDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~-l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||+||+|++.+ +.||+|++.+.... .....+.+..|..++.. .+||||+++++++..+...|+||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~ 78 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVL--EDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYL 78 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh--hhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCC
Confidence 469999999999999864 56999999764211 11122233344455554 48999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ |+|.+++...+.+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... .
T Consensus 79 ~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~-------~ 151 (316)
T cd05592 79 NGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE-------G 151 (316)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC-------C
Confidence 8 6999999888889999999999999999999999999999999999999999999999999987542211 1
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCH
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDS 266 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (1553)
......|++.|+|||++. +..++.++|||||||++|||++|..||...+..............++...+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 221 (316)
T cd05592 152 KASTFCGTPDYIAPEILK----------GQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFPRWISK 221 (316)
T ss_pred ccccccCCccccCHHHHc----------CCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCCCCH
Confidence 123345789999999774 3457889999999999999999999997655443332222223345556678
Q ss_pred HHHHHHHHhcccCcCCCCCHH-HHHHh
Q 000410 267 GIRKMILHMIQLEPELRFSAE-SYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rpsa~-elL~~ 292 (1553)
.+.++|.+||+.||.+||++. ++++|
T Consensus 222 ~~~~ll~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05592 222 EAKDCLSKLFERDPTKRLGVDGDIRQH 248 (316)
T ss_pred HHHHHHHHHccCCHHHcCCChHHHHcC
Confidence 899999999999999999865 66666
No 76
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=1e-33 Score=344.71 Aligned_cols=252 Identities=17% Similarity=0.202 Sum_probs=200.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++.. +.||+|++.+... ......+.+.+|+.+++.++||||+++++++++++..|+|
T Consensus 44 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~lv 121 (370)
T cd05596 44 DFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEM--IKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYMV 121 (370)
T ss_pred HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEE
Confidence 79999999999999999999864 5799999965311 1122334467788999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ |+|.+++... .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 122 ~Ey~~gg~L~~~l~~~-~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~---- 196 (370)
T cd05596 122 MEYMPGGDLVNLMSNY-DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANG---- 196 (370)
T ss_pred EcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCC----
Confidence 99998 6999998765 48999999999999999999999999999999999999999999999999987542111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~ 258 (1553)
.....+..|++.|+|||++.... ....++.++|||||||++|||++|.+||....... +.........
T Consensus 197 --~~~~~~~~gt~~y~aPE~~~~~~------~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~ 268 (370)
T cd05596 197 --MVRCDTAVGTPDYISPEVLKSQG------GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTF 268 (370)
T ss_pred --cccCCCCCCCcCeECHHHhccCC------CCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCC
Confidence 11123456899999999885321 13457899999999999999999999997654432 2222211111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 292 (1553)
......+..+++||.+||+.+|.+ |++++++++|
T Consensus 269 ~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 269 PDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 111234678999999999999988 9999999998
No 77
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=7.6e-34 Score=340.65 Aligned_cols=243 Identities=18% Similarity=0.231 Sum_probs=193.7
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||+||+|++.. ..||+|++.+... ........+..|..+++.+ +||||+++++++++++..|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~ 78 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELV--NDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFV 78 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCC
Confidence 469999999999999864 5699999976421 1223345567788888887 7999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ |+|.+++...+.+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....+..
T Consensus 79 ~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~------- 151 (329)
T cd05588 79 SGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD------- 151 (329)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCC-------
Confidence 9 59999998777899999999999999999999999999999999999999999999999999874321111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH--------HHH-HHhcCCCCC
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH--------LLA-YRRGQYDPS 257 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~--------~~~-~~~~~~~~~ 257 (1553)
...+..|++.|+|||++. +..++.++|||||||++|+|++|.+||+... ... ..+......
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (329)
T cd05588 152 TTSTFCGTPNYIAPEILR----------GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQ 221 (329)
T ss_pred ccccccCCccccCHHHHc----------CCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCC
Confidence 122346789999999774 3467889999999999999999999996211 111 111111112
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCC------HHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFS------AESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rps------a~elL~~ 292 (1553)
..++...+..+.++|.+||+.||.+|++ ++++++|
T Consensus 222 ~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05588 222 IRIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSH 262 (329)
T ss_pred CCCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcC
Confidence 2244455678999999999999999997 7889888
No 78
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-35 Score=341.89 Aligned_cols=241 Identities=22% Similarity=0.241 Sum_probs=207.0
Q ss_pred EeeccCcEEEEEEEECCc--eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-
Q 000410 32 VLGGSRFFKSILCKHDEG--LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF- 108 (1553)
Q Consensus 32 ~LG~G~fg~V~~a~~~~~--~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~- 108 (1553)
+||+|.||+||-|++... .+|||-+..+ ...+.+-+.+|+..-+.+.|.|||+|++.+..++++-|.||-++
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpek-----dsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPG 656 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEK-----DSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPG 656 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccc-----cchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCC
Confidence 799999999999999764 4788877543 23445667888889999999999999999999999999999999
Q ss_pred CCHHHHhcCC-CCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec-CCcEEEeecCccccccCCCCCCCCc
Q 000410 109 NSLRDRLSTP-PFL--SLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS-WNWLYLSDFASFKPTYIPYDDPSDF 184 (1553)
Q Consensus 109 gsL~d~l~~~-~~l--~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~-~~~vkL~DFG~a~~~~~~~~~~~~~ 184 (1553)
|+|.+++... +++ .+...-.+.+||++||.|||++.|||||||-+||||+. .|.+||+|||.+|... ..
T Consensus 657 GSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA-------gi 729 (1226)
T KOG4279|consen 657 GSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA-------GI 729 (1226)
T ss_pred CcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhc-------cC
Confidence 6999999764 567 78889999999999999999999999999999999975 5899999999988652 23
Q ss_pred ceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCC---chHHHHHHhcCCCCCCCCC
Q 000410 185 SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE---LSHLLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 185 ~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~---~~~~~~~~~~~~~~~~~~~ 261 (1553)
.....+..||..|||||++. .....|++++|||||||++.||.||+|||. ..+...++-|.|...+.++
T Consensus 730 nP~TETFTGTLQYMAPEvID--------qG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iP 801 (1226)
T KOG4279|consen 730 NPCTETFTGTLQYMAPEVID--------QGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIP 801 (1226)
T ss_pred CccccccccchhhhChHhhc--------cCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhhcceecCCCCc
Confidence 33446677999999999885 334579999999999999999999999995 3455567788888777788
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+.+++.+|.+|+.+||.+||+|.++|++
T Consensus 802 eelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 802 EELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred HHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 8888899999999999999999999999986
No 79
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.2e-33 Score=345.93 Aligned_cols=255 Identities=18% Similarity=0.166 Sum_probs=197.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|++.+.||+|+||+||+|++.. ..||+|++.+... ........+..|+++++.++||||+++++++.+....|+|
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv 79 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV--LNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 79 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEE
Confidence 58899999999999999999854 5699999976421 1233455688889999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC--
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD-- 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~-- 180 (1553)
|||++ |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~ 159 (381)
T cd05626 80 MDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKY 159 (381)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCccccccccccc
Confidence 99998 599999988778999999999999999999999999999999999999999999999999987533110000
Q ss_pred -------------CC-------------------------CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcc
Q 000410 181 -------------PS-------------------------DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSM 222 (1553)
Q Consensus 181 -------------~~-------------------------~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~ 222 (1553)
+. .......+..||+.|+|||++. +..++.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----------~~~~~~~~ 229 (381)
T cd05626 160 YQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLL----------RKGYTQLC 229 (381)
T ss_pred ccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHc----------CCCCCCcc
Confidence 00 0000012346899999999874 34578899
Q ss_pred cHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCCCCCCCCCCHHHHHHHHHhcc--cCcCCCCCHHHHHHh
Q 000410 223 DIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQ--LEPELRFSAESYLQN 292 (1553)
Q Consensus 223 DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~LI~~mL~--~dP~~Rpsa~elL~~ 292 (1553)
|||||||++|||++|.+||....... +...............++++++||.+|+. .+|..|++++++++|
T Consensus 230 DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~h 305 (381)
T cd05626 230 DWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAH 305 (381)
T ss_pred ceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 99999999999999999996543322 11111111111112346789999999664 455559999999998
No 80
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.7e-33 Score=337.96 Aligned_cols=244 Identities=15% Similarity=0.112 Sum_probs=198.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++++.. ..+|+|++.... .......+.+|+++++.++||||+++++++..++..|+|
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (331)
T cd06649 6 DFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI----KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (331)
T ss_pred cceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc----CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 79999999999999999999864 568999886531 234556788899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK-GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~-gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||++ ++|.+++.....+++..+..++.|++.||.|||++ +|+||||||+|||++.++.++|+|||++......
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 157 (331)
T cd06649 82 MEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 157 (331)
T ss_pred eecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccc----
Confidence 99999 59999998877899999999999999999999986 6999999999999999999999999988754211
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCC-------
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY------- 254 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~------- 254 (1553)
......|++.|+|||.+. +..++.++|||||||++|||++|+.||.......+.....
T Consensus 158 -----~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~ 222 (331)
T cd06649 158 -----MANSFVGTRSYMSPERLQ----------GTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGE 222 (331)
T ss_pred -----ccccCCCCcCcCCHhHhc----------CCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccc
Confidence 112335788999999764 3467889999999999999999999996433222211000
Q ss_pred ----------------------------------------CCCCC-CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 ----------------------------------------DPSQH-LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ----------------------------------------~~~~~-~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+. .....++++++||.+||+.||++|||++++++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 223 EGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred cCCccccCcccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 00000 111345789999999999999999999999998
No 81
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=1.1e-33 Score=346.04 Aligned_cols=254 Identities=18% Similarity=0.211 Sum_probs=197.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||+||+|++.. +.||||++.+... ......+.+.+|+++++.++||||++++++++++...|+|
T Consensus 2 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv 79 (377)
T cd05629 2 DFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM--FKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLI 79 (377)
T ss_pred CceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH--HHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEE
Confidence 68999999999999999998853 6799999865411 1233445678899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC--
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD-- 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~-- 180 (1553)
|||++ |+|.+++...+.+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~ 159 (377)
T cd05629 80 MEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAY 159 (377)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 99998 699999988788999999999999999999999999999999999999999999999999998632111000
Q ss_pred --------CCC----c--------------------------ceeeecCCCCccccCcchhcccCCccccccCCCCCCcc
Q 000410 181 --------PSD----F--------------------------SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSM 222 (1553)
Q Consensus 181 --------~~~----~--------------------------~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~ 222 (1553)
... . ........||+.|+|||++. +..++.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----------~~~~~~~~ 229 (377)
T cd05629 160 YQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFL----------QQGYGQEC 229 (377)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHc----------cCCCCCce
Confidence 000 0 00001245889999999764 34578899
Q ss_pred cHHHHHHHHHHHHcCCCCCCchHHHHHHhcC--CCCCCCCCC--CCCHHHHHHHHHhcccCcCCC---CCHHHHHHh
Q 000410 223 DIFAVGCVIAELFLEVPFFELSHLLAYRRGQ--YDPSQHLEK--IPDSGIRKMILHMIQLEPELR---FSAESYLQN 292 (1553)
Q Consensus 223 DIwSlG~il~eLltg~~pf~~~~~~~~~~~~--~~~~~~~~~--~~~~~l~~LI~~mL~~dP~~R---psa~elL~~ 292 (1553)
|||||||++|||++|.+||............ ......++. ..+.++++||.+||. +|.+| +++.|+++|
T Consensus 230 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 230 DWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred eeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 9999999999999999999654332211111 111111222 346789999999998 77775 599999998
No 82
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=5.2e-34 Score=348.83 Aligned_cols=254 Identities=17% Similarity=0.190 Sum_probs=198.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++.. +.||+|++.+.. .........+.+|+++++.++||||+++++.+++++..|+|
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~--~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 79 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKAD--VLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 79 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHH--HHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEE
Confidence 68999999999999999999864 679999986541 11122345677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC--
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD-- 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~-- 180 (1553)
|||++ |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++.......+.
T Consensus 80 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~ 159 (376)
T cd05598 80 MDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (376)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccc
Confidence 99998 699999988888999999999999999999999999999999999999999999999999987532100000
Q ss_pred --------------CC--------------------CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHH
Q 000410 181 --------------PS--------------------DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFA 226 (1553)
Q Consensus 181 --------------~~--------------------~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwS 226 (1553)
.. ..........||+.|+|||++. +..++.++||||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwS 229 (376)
T cd05598 160 YQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLL----------RTGYTQLCDWWS 229 (376)
T ss_pred cccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHc----------CCCCCcceeeee
Confidence 00 0000011346899999999774 345788999999
Q ss_pred HHHHHHHHHcCCCCCCchHHHHH----HhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCC---CHHHHHHh
Q 000410 227 VGCVIAELFLEVPFFELSHLLAY----RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRF---SAESYLQN 292 (1553)
Q Consensus 227 lG~il~eLltg~~pf~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rp---sa~elL~~ 292 (1553)
|||++|||++|++||........ ...............++.+.++|.+|+ .+|.+|+ +++++++|
T Consensus 230 lGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h 301 (376)
T cd05598 230 VGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAH 301 (376)
T ss_pred ccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCC
Confidence 99999999999999975543322 111111111112234678999999987 5999999 99999998
No 83
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.2e-33 Score=346.21 Aligned_cols=254 Identities=19% Similarity=0.216 Sum_probs=198.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|++.+.||+|+||.||+|++.. ..||+|++.+.. .........+.+|+++++.++||||+++++.+.++...|+|
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~--~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv 79 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKD--VLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 79 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHH--hhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEE
Confidence 58899999999999999999854 569999987541 12234456788899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC--
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD-- 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~-- 180 (1553)
|||++ |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.+|.+||+|||++.........
T Consensus 80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~ 159 (382)
T cd05625 80 MDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 159 (382)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCccccccccccc
Confidence 99998 699999988778999999999999999999999999999999999999999999999999987532110000
Q ss_pred ----------CCC----------------------------cceeeecCCCCccccCcchhcccCCccccccCCCCCCcc
Q 000410 181 ----------PSD----------------------------FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSM 222 (1553)
Q Consensus 181 ----------~~~----------------------------~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~ 222 (1553)
..+ ......+..||+.|+|||++. +..++.++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----------~~~~~~~~ 229 (382)
T cd05625 160 YQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLL----------RTGYTQLC 229 (382)
T ss_pred cccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhc----------CCCCCCee
Confidence 000 000012345889999999774 34578899
Q ss_pred cHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCC---HHHHHHh
Q 000410 223 DIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS---AESYLQN 292 (1553)
Q Consensus 223 DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rps---a~elL~~ 292 (1553)
|||||||++|||++|.+||....... +...............++.+.++|.+|+ .||.+|++ ++++++|
T Consensus 230 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~h 305 (382)
T cd05625 230 DWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAH 305 (382)
T ss_pred eEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcC
Confidence 99999999999999999997543322 2221111111112234678999999987 59999997 9999988
No 84
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=8.2e-34 Score=338.26 Aligned_cols=243 Identities=16% Similarity=0.213 Sum_probs=191.8
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhc-CCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRS-IDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~-l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||+||+|++.+ +.||+|++.+.... .+........|..+++. ++||||+++++++.+++..|+||||+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~ 78 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVL--MDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYL 78 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh--hcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCC
Confidence 469999999999999864 56999999764110 11122334445556664 58999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ |+|.+++.....+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------- 151 (316)
T cd05619 79 NGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA------- 151 (316)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC-------
Confidence 8 69999998877799999999999999999999999999999999999999999999999999875322111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCH
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDS 266 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (1553)
......|++.|+|||++. +..++.++||||+||++|||++|.+||.........+........++...+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 221 (316)
T cd05619 152 KTCTFCGTPDYIAPEILL----------GQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPRWLTR 221 (316)
T ss_pred ceeeecCCccccCHHHHc----------CCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccCCH
Confidence 112345788999999774 3467889999999999999999999997554433322211112234445678
Q ss_pred HHHHHHHHhcccCcCCCCCHH-HHHHh
Q 000410 267 GIRKMILHMIQLEPELRFSAE-SYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rpsa~-elL~~ 292 (1553)
.++++|.+||+.||++||++. ++++|
T Consensus 222 ~~~~li~~~l~~~P~~R~~~~~~l~~h 248 (316)
T cd05619 222 EAKDILVKLFVREPERRLGVKGDIRQH 248 (316)
T ss_pred HHHHHHHHHhccCHhhcCCChHHHHcC
Confidence 899999999999999999996 77776
No 85
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=1.2e-33 Score=338.81 Aligned_cols=243 Identities=19% Similarity=0.235 Sum_probs=192.1
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||+||+|++.. ..||+|++.+... ........+..|..++..+ +||||+++++++.+++..|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~ 78 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELV--NDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 78 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHh--cchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCC
Confidence 469999999999999864 5699999976521 1123344566676777665 7999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ |+|.+++...+.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....+...
T Consensus 79 ~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~------ 152 (329)
T cd05618 79 NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDT------ 152 (329)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCc------
Confidence 9 699999988778999999999999999999999999999999999999999999999999998743221111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch---------HHHHHHhcCCCCC
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS---------HLLAYRRGQYDPS 257 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~---------~~~~~~~~~~~~~ 257 (1553)
.....|++.|+|||.+. +..++.++|||||||++|||++|.+||... ......+......
T Consensus 153 -~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~ 221 (329)
T cd05618 153 -TSTFCGTPNYIAPEILR----------GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQ 221 (329)
T ss_pred -cccccCCccccCHHHHc----------CCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCC
Confidence 12345789999999774 346788999999999999999999998421 0111111111122
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCC------HHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFS------AESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rps------a~elL~~ 292 (1553)
..++...+..+.++|.+||+.||++||+ ++++++|
T Consensus 222 ~~~p~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~h 262 (329)
T cd05618 222 IRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGH 262 (329)
T ss_pred CCCCCCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcC
Confidence 2345556778999999999999999998 4788887
No 86
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.3e-33 Score=342.49 Aligned_cols=244 Identities=20% Similarity=0.277 Sum_probs=192.4
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
+|++.+.||+|+||.||+|.+. ++.||+|++.+.. ........+.+|..+++.++||||+++++++...
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 18 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPF---QNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred ceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcc---cChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 7999999999999999999875 3669999986542 1223345566788899999999999999988543
Q ss_pred CEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 98 KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
...|+||||++++|.+.+.. .+++.++..++.|++.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 95 ~~~~lv~e~~~~~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~ 172 (355)
T cd07874 95 QDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 172 (355)
T ss_pred ceeEEEhhhhcccHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCc
Confidence 35799999999999888864 3889999999999999999999999999999999999999999999999998754211
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH--------
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY-------- 249 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~-------- 249 (1553)
.......+++.|+|||++. +..++.++|||||||++|+|++|+.||........
T Consensus 173 --------~~~~~~~~t~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 234 (355)
T cd07874 173 --------FMMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234 (355)
T ss_pred --------cccCCccccCCccCHHHHc----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 1123345788999999774 34578899999999999999999999965432110
Q ss_pred ------------------Hhc--CC--------------CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 250 ------------------RRG--QY--------------DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 250 ------------------~~~--~~--------------~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... .+ ..........+..+++||.+||+.||++|||+.|+|+|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 235 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred CCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 000 00 00011112234578999999999999999999999998
No 87
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.6e-33 Score=342.60 Aligned_cols=252 Identities=19% Similarity=0.204 Sum_probs=199.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++++.. +.+|+|++.+... ........+.+|+.+++.++||||++++++++++...|+|
T Consensus 44 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 44 DYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEM--IKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 79999999999999999999864 5699999975311 1122344577888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ |+|.+++... .+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 122 ~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~---- 196 (370)
T cd05621 122 MEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG---- 196 (370)
T ss_pred EcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCC----
Confidence 99998 6999999765 48999999999999999999999999999999999999999999999999987542111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~ 258 (1553)
.....+..||+.|+|||++.... ....++.++||||+||++|||++|.+||....... +.........
T Consensus 197 --~~~~~~~~gt~~Y~aPE~~~~~~------~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~ 268 (370)
T cd05621 197 --MVRCDTAVGTPDYISPEVLKSQG------GDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNF 268 (370)
T ss_pred --ceecccCCCCcccCCHHHHhccC------CCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCC
Confidence 11223556899999999886332 12347889999999999999999999997654322 2222111111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 292 (1553)
......+..++++|.+||..+|.+ |++++|+++|
T Consensus 269 p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 269 PEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 111234678999999999865544 8899999998
No 88
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=1.2e-33 Score=337.40 Aligned_cols=243 Identities=19% Similarity=0.233 Sum_probs=195.6
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||+||+|++.. ..||+|++.+... ........+..|.++++.+ +||||+++++++++.+..|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 78 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVI--LQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYV 78 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHH--hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCC
Confidence 469999999999999864 5799999976421 1112233455666777776 6999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
. |+|.+++...+.+++.++..++.||+.||.|||++||+||||||+|||++.++.++|+|||+++.......
T Consensus 79 ~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~------- 151 (318)
T cd05570 79 NGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV------- 151 (318)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC-------
Confidence 8 69999998887899999999999999999999999999999999999999999999999998864321111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCH
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDS 266 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (1553)
......|++.|+|||.+. +..++.++|||||||++|+|++|.+||...................+...++
T Consensus 152 ~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 221 (318)
T cd05570 152 TTSTFCGTPDYIAPEILS----------YQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPRWLSK 221 (318)
T ss_pred cccceecCccccCHHHhc----------CCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCcCCH
Confidence 112235788999999774 3467889999999999999999999997655444333222222234455678
Q ss_pred HHHHHHHHhcccCcCCCCCH-----HHHHHh
Q 000410 267 GIRKMILHMIQLEPELRFSA-----ESYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 292 (1553)
.+++||.+||+.||++||++ .++++|
T Consensus 222 ~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~ 252 (318)
T cd05570 222 EAKSILKSFLTKNPEKRLGCLPTGEQDIKGH 252 (318)
T ss_pred HHHHHHHHHccCCHHHcCCCCCCCHHHHhcC
Confidence 99999999999999999999 999987
No 89
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=5e-34 Score=340.80 Aligned_cols=242 Identities=20% Similarity=0.227 Sum_probs=195.3
Q ss_pred EEeeccCcEEEEEEEEC-----CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEec
Q 000410 31 EVLGGSRFFKSILCKHD-----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQ 105 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~-----~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E 105 (1553)
+.||+|+||.||++++. +..||+|++.+... .......+..|+++++.++||||+++++++.++...|+|||
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 78 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATL---KVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILD 78 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHh---hhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEc
Confidence 67999999999999762 35699999976421 11223456678889999999999999999999999999999
Q ss_pred ccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCc
Q 000410 106 YFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDF 184 (1553)
Q Consensus 106 ~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~ 184 (1553)
|++ |+|.+++..+..+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~----- 153 (318)
T cd05582 79 FLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK----- 153 (318)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC-----
Confidence 998 69999998887899999999999999999999999999999999999999999999999999875422111
Q ss_pred ceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCC
Q 000410 185 SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIP 264 (1553)
Q Consensus 185 ~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 264 (1553)
......|++.|+|||.+. ...++.++|||||||++|||++|+.||..................++...
T Consensus 154 --~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~~~ 221 (318)
T cd05582 154 --KAYSFCGTVEYMAPEVVN----------RRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFL 221 (318)
T ss_pred --ceecccCChhhcCHHHHc----------CCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence 112345788999999764 33567899999999999999999999976544333222222222344556
Q ss_pred CHHHHHHHHHhcccCcCCCCC-----HHHHHHh
Q 000410 265 DSGIRKMILHMIQLEPELRFS-----AESYLQN 292 (1553)
Q Consensus 265 ~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 292 (1553)
++.+++||.+||+.||++||+ ++++++|
T Consensus 222 ~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~ 254 (318)
T cd05582 222 SPEAQSLLRALFKRNPANRLGAGPDGVEEIKRH 254 (318)
T ss_pred CHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCC
Confidence 788999999999999999999 5667766
No 90
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=1.6e-33 Score=354.02 Aligned_cols=246 Identities=18% Similarity=0.199 Sum_probs=198.8
Q ss_pred ccceEEEEEeeccCcEEEEEEEECC---ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEE
Q 000410 24 SYNLVLKEVLGGSRFFKSILCKHDE---GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 24 ~~~y~~~~~LG~G~fg~V~~a~~~~---~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~ 100 (1553)
...|.+.+.||+|+||.||+|.... ..||+|.+... .......+.+|+.+++.++||||++++++++.++..
T Consensus 66 ~~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~-----~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~ 140 (478)
T PTZ00267 66 EHMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN-----DERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKL 140 (478)
T ss_pred ceeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC-----CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEE
Confidence 3359999999999999999998753 45888876432 123345677888999999999999999999999999
Q ss_pred EEEecccc-CCHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccccc
Q 000410 101 YLLRQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTY 175 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~ 175 (1553)
||||||++ |+|.+++. .+..+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus 141 ~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~ 220 (478)
T PTZ00267 141 LLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYS 220 (478)
T ss_pred EEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecC
Confidence 99999998 69988764 34568999999999999999999999999999999999999999999999999987642
Q ss_pred CCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----Hh
Q 000410 176 IPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RR 251 (1553)
Q Consensus 176 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~ 251 (1553)
.... .....+..||+.|+|||++. +..++.++|||||||++|||++|.+||........ ..
T Consensus 221 ~~~~-----~~~~~~~~gt~~y~aPE~~~----------~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~ 285 (478)
T PTZ00267 221 DSVS-----LDVASSFCGTPYYLAPELWE----------RKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLY 285 (478)
T ss_pred Cccc-----cccccccCCCccccCHhHhC----------CCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence 2110 11123446899999999764 34678999999999999999999999975543332 22
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.+. ..+...+..++++|.+||..||++||++++++++
T Consensus 286 ~~~~---~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 286 GKYD---PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred CCCC---CCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 3322 2333456789999999999999999999999987
No 91
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=7.9e-34 Score=339.55 Aligned_cols=243 Identities=20% Similarity=0.266 Sum_probs=191.9
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHH-HHHHhcCCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHI-RETFRSIDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e-~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||.||+|++.. ..||+|++.+... ........+..| ..+++.++||||+++++++.+.+..|+||||+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 78 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTI--LKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYV 78 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHH--HHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCC
Confidence 479999999999999854 5699999976421 111222333333 34678899999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ |+|.+.+.....+++.++..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++....+..
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~------- 151 (321)
T cd05603 79 NGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEE------- 151 (321)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCC-------
Confidence 9 59999998777899999999999999999999999999999999999999999999999998874322111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCH
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDS 266 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (1553)
......|++.|+|||.+. +..++.++|||||||++|||++|.+||...+..............++...+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 221 (321)
T cd05603 152 TTSTFCGTPEYLAPEVLR----------KEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGGKTV 221 (321)
T ss_pred ccccccCCcccCCHHHhc----------CCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCCCCCCH
Confidence 112345789999999764 3457889999999999999999999997665444333322222334445567
Q ss_pred HHHHHHHHhcccCcCCCCCHH----HHHHh
Q 000410 267 GIRKMILHMIQLEPELRFSAE----SYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rpsa~----elL~~ 292 (1553)
.+.++|.+||+.||.+||++. ++++|
T Consensus 222 ~~~~li~~~l~~~p~~R~~~~~~~~~~~~~ 251 (321)
T cd05603 222 AACDLLVGLLHKDQRRRLGAKADFLEIKNH 251 (321)
T ss_pred HHHHHHHHHccCCHhhcCCCCCCHHHHhCC
Confidence 899999999999999999764 56555
No 92
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=2e-33 Score=340.53 Aligned_cols=247 Identities=21% Similarity=0.215 Sum_probs=196.1
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|+..+.||+|+||.||+|++. +..||||++.... .......+.+|+++++.++||||++++++++.++..|+|
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 150 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH----EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVL 150 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC----cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEE
Confidence 6888999999999999999986 4679999986542 234556788999999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+. |+|.+. ..+.+..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 151 ~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--- 223 (353)
T PLN00034 151 LEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD--- 223 (353)
T ss_pred EecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccc---
Confidence 99999 477543 2356788889999999999999999999999999999999999999999999875422111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH---HHHH-HhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH---LLAY-RRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~---~~~~-~~~~~~~~~ 258 (1553)
......|+..|+|||.+.... ..+...+.++|||||||++|||++|+.||.... .... .........
T Consensus 224 ----~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 294 (353)
T PLN00034 224 ----PCNSSVGTIAYMSPERINTDL-----NHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPP 294 (353)
T ss_pred ----cccccccCccccCcccccccc-----ccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCC
Confidence 112345789999999874321 123345678999999999999999999996322 1111 111122222
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+...+.++++||.+||+.||++||++.|+++|
T Consensus 295 ~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 295 EAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 3344556789999999999999999999999998
No 93
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=2.1e-33 Score=329.40 Aligned_cols=245 Identities=14% Similarity=0.018 Sum_probs=199.2
Q ss_pred EEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe----CCEEEEEecc
Q 000410 31 EVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET----DKAAYLLRQY 106 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~----~~~~~lV~E~ 106 (1553)
..||+|+++.||+|+..++.||||++.+.. .......+.+.+|+.+|++++||||+++++++.+ ....++||||
T Consensus 26 ~~i~~g~~~~v~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey 103 (283)
T PHA02988 26 VLIKENDQNSIYKGIFNNKEVIIRTFKKFH--KGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEY 103 (283)
T ss_pred eEEeeCCceEEEEEEECCEEEEEEeccccc--cccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEe
Confidence 679999999999999998999999986542 2234445678899999999999999999999876 3578999999
Q ss_pred cc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCc
Q 000410 107 FF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDF 184 (1553)
Q Consensus 107 ~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~ 184 (1553)
+. |+|.+++..+..+++.....++.|++.||.|||+ .+++||||||+|||++.++.+||+|||+++....+.
T Consensus 104 ~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~------ 177 (283)
T PHA02988 104 CTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP------ 177 (283)
T ss_pred CCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc------
Confidence 99 6999999888889999999999999999999998 599999999999999999999999999987542211
Q ss_pred ceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcC--CCCCCCCCC
Q 000410 185 SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQ--YDPSQHLEK 262 (1553)
Q Consensus 185 ~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~--~~~~~~~~~ 262 (1553)
....+++.|+|||.+.+. ...++.++|||||||++|||++|..||............ ......++.
T Consensus 178 ----~~~~~~~~y~aPE~~~~~--------~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~ 245 (283)
T PHA02988 178 ----FKNVNFMVYFSYKMLNDI--------FSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIINKNNSLKLPL 245 (283)
T ss_pred ----ccccCcccccCHHHhhhc--------cccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCC
Confidence 123467889999977421 246889999999999999999999999765433322111 111222343
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 263 IPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
..++.++++|.+||+.||++|||++|+++.+..
T Consensus 246 ~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~ 278 (283)
T PHA02988 246 DCPLEIKCIVEACTSHDSIKRPNIKEILYNLSL 278 (283)
T ss_pred cCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHH
Confidence 456789999999999999999999999998653
No 94
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=1.5e-33 Score=338.58 Aligned_cols=254 Identities=18% Similarity=0.170 Sum_probs=202.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+.+.||+|+||.||+|++.. +.||+|++.+.. .......+.+.+|+.+++.++||||++++++++++...|+|
T Consensus 2 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv 79 (330)
T cd05601 2 DFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSV--LLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLV 79 (330)
T ss_pred CceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHH--hhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEE
Confidence 68999999999999999999863 679999997642 11233456678888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||++ |+|.+++... ..+++..++.++.||+.||.|||++||+||||||+|||++.+|.+||+|||++.......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~--- 156 (330)
T cd05601 80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK--- 156 (330)
T ss_pred ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCC---
Confidence 99998 6999999775 569999999999999999999999999999999999999999999999999987542111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~ 257 (1553)
........|++.|+|||++..... .....++.++|||||||++|||++|..||....... +........
T Consensus 157 ---~~~~~~~~gt~~y~aPE~~~~~~~----~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~ 229 (330)
T cd05601 157 ---MVNSKLPVGTPDYIAPEVLTTMNG----DGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLK 229 (330)
T ss_pred ---ceeeecccCCccccCHHHhccccc----cccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccC
Confidence 112233467899999998853221 124567899999999999999999999997543322 221111111
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.......++.+++||.+||. ||.+||+++++++|
T Consensus 230 ~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 230 FPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred CCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 11112346789999999998 99999999999988
No 95
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=7.2e-34 Score=340.46 Aligned_cols=242 Identities=21% Similarity=0.281 Sum_probs=189.0
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF 108 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~ 108 (1553)
+.||+|+||.||+|++.. +.||+|++.+.... ........+.++..+++.++||||++++++++.++..|+||||++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~ 79 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAIL-KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 79 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHH-hhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCC
Confidence 479999999999999864 56999999764111 111122223333345778899999999999999999999999999
Q ss_pred -CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 109 -NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 109 -gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
|+|.+++.....+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....... .
T Consensus 80 ~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~-------~ 152 (325)
T cd05602 80 GGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG-------T 152 (325)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC-------C
Confidence 59999998877899999999999999999999999999999999999999999999999999875321111 1
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCHH
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSG 267 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (1553)
.....|++.|+|||++. +..++.++|||||||++|||++|.+||.......................+..
T Consensus 153 ~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~ 222 (325)
T cd05602 153 TSTFCGTPEYLAPEVLH----------KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITNS 222 (325)
T ss_pred cccccCCccccCHHHHc----------CCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCCCCCCHH
Confidence 22345789999999774 34678899999999999999999999976544333222222122233344678
Q ss_pred HHHHHHHhcccCcCCCCCHHHHH
Q 000410 268 IRKMILHMIQLEPELRFSAESYL 290 (1553)
Q Consensus 268 l~~LI~~mL~~dP~~Rpsa~elL 290 (1553)
+.++|.+||+.||.+|+++.+.+
T Consensus 223 ~~~li~~~l~~~p~~R~~~~~~~ 245 (325)
T cd05602 223 ARHLLEGLLQKDRTKRLGAKDDF 245 (325)
T ss_pred HHHHHHHHcccCHHHCCCCCCCH
Confidence 99999999999999999887433
No 96
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2.6e-33 Score=340.43 Aligned_cols=244 Identities=21% Similarity=0.295 Sum_probs=192.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK----- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~----- 98 (1553)
+|++.+.||+|+||.||+|.+.. ..||+|++.+.. ........+.+|..+++.++||||+++++++...+
T Consensus 22 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 22 RYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPF---QNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred ceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccc---cchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 79999999999999999998853 679999986542 12233455667889999999999999999886543
Q ss_pred -EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 99 -AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 99 -~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
..|+||||++++|.+.+.. .+++.++..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.....
T Consensus 99 ~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~ 176 (359)
T cd07876 99 QDVYLVMELMDANLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN 176 (359)
T ss_pred ceeEEEEeCCCcCHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccC
Confidence 5799999999999888754 3789999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH---------
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA--------- 248 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~--------- 248 (1553)
.......+++.|+|||.+. +..++.++|||||||++|+|++|.+||...+...
T Consensus 177 --------~~~~~~~~t~~y~aPE~~~----------~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 238 (359)
T cd07876 177 --------FMMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQL 238 (359)
T ss_pred --------ccCCCCcccCCCCCchhcc----------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 1112345688899999764 3467889999999999999999999996432110
Q ss_pred -----------------HHhc--CCC--------------CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 -----------------YRRG--QYD--------------PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 -----------------~~~~--~~~--------------~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+... .+. .........++.+++||.+||+.||++|||+.|+|+|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 239 GTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred CCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 000 0001112335678999999999999999999999998
No 97
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-34 Score=334.60 Aligned_cols=243 Identities=19% Similarity=0.187 Sum_probs=196.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECCc-eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEG-LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~-~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
.+++++.||+|-||.|+.|++++. .||+|.+... ... .+.+.+|+.+|++|+|+|||++++++..+..+||||
T Consensus 207 ~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~--~m~----~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVt 280 (468)
T KOG0197|consen 207 ELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG--SMS----PEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVT 280 (468)
T ss_pred HHHHHHHhcCCccceEEEEEEcCCCcccceEEecc--ccC----hhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEE
Confidence 466778999999999999999886 7999998653 112 234568899999999999999999999988999999
Q ss_pred cccc-CCHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||+. |+|.++|+. +..+...+...++.||++|++||+++++|||||...||||++++.+||+|||+++.....
T Consensus 281 E~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~---- 356 (468)
T KOG0197|consen 281 EYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDD---- 356 (468)
T ss_pred EecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCC----
Confidence 9999 899999987 566999999999999999999999999999999999999999999999999999943211
Q ss_pred CCcceeee-cCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHH---HHHHhcCCCC
Q 000410 182 SDFSFFFD-TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHL---LAYRRGQYDP 256 (1553)
Q Consensus 182 ~~~~~~~~-~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~---~~~~~~~~~~ 256 (1553)
.+... ...-..-|.|||.|. ...++.|+||||||++|+||+| |+.||..-.. .......+..
T Consensus 357 ---~Y~~~~~~kfPIkWtAPEa~~----------~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRl 423 (468)
T KOG0197|consen 357 ---EYTASEGGKFPIKWTAPEALN----------YGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRL 423 (468)
T ss_pred ---ceeecCCCCCCceecCHHHHh----------hCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcC
Confidence 11111 111234599999775 4578999999999999999999 5888864432 2222233321
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
. -|...++.+.+++..||..+|++|||++.+...+
T Consensus 424 p--~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l 458 (468)
T KOG0197|consen 424 P--RPEGCPDEVYELMKSCWHEDPEDRPTFETLREVL 458 (468)
T ss_pred C--CCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHH
Confidence 1 2344567899999999999999999999777654
No 98
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.7e-33 Score=334.83 Aligned_cols=247 Identities=20% Similarity=0.307 Sum_probs=195.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++.. +.||+|++....... ....+.+|+.+++.++||||+++++++..++..|+|
T Consensus 7 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 82 (309)
T cd07872 7 TYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG----APCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLV 82 (309)
T ss_pred ceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCC----cchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEE
Confidence 79999999999999999998853 669999986542211 123355678899999999999999999999999999
Q ss_pred eccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++++|.+++... ..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....+..
T Consensus 83 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--- 159 (309)
T cd07872 83 FEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK--- 159 (309)
T ss_pred EeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc---
Confidence 999999999988654 4589999999999999999999999999999999999999999999999999875422211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhc------
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRG------ 252 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~------ 252 (1553)
......+++.|+|||.+.+ ...++.++||||+||++|+|++|.+||....... +.+.
T Consensus 160 ----~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 226 (309)
T cd07872 160 ----TYSNEVVTLWYRPPDVLLG---------SSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTE 226 (309)
T ss_pred ----ccccccccccccCCHHHhC---------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence 1123346788999997742 2357889999999999999999999996543211 1100
Q ss_pred ---------------CCC---CCC--CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 ---------------QYD---PSQ--HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ---------------~~~---~~~--~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+. +.. ......++++++||.+||+.||.+|||++|+++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 227 ETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred HHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 000 000 0111235688999999999999999999999998
No 99
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.2e-33 Score=338.51 Aligned_cols=243 Identities=20% Similarity=0.268 Sum_probs=190.5
Q ss_pred EEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHH-HHHhcCCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIR-ETFRSIDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~-~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||+||+|++. +..||+|++.+.... . ......+..|. .+++.++||||++++++++.++..|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~-~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~ 78 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVL-N-RKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFV 78 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh-h-hhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCC
Confidence 46999999999999985 357999999764211 1 12223333333 4577899999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
. |+|.+++.....+++.++..++.||+.||+|||++||+||||||+|||++.+|.+||+|||+++.......
T Consensus 79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~------- 151 (325)
T cd05604 79 NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD------- 151 (325)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC-------
Confidence 9 59999998888899999999999999999999999999999999999999999999999999874321111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCH
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDS 266 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (1553)
......|++.|+|||.+. +..++.++|||||||++|||++|.+||...+...................+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (325)
T cd05604 152 TTTTFCGTPEYLAPEVIR----------KQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRPGASL 221 (325)
T ss_pred CcccccCChhhCCHHHHc----------CCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCCCCCCH
Confidence 112345789999999774 3457889999999999999999999997655443322222212222333567
Q ss_pred HHHHHHHHhcccCcCCCCCHH----HHHHh
Q 000410 267 GIRKMILHMIQLEPELRFSAE----SYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rpsa~----elL~~ 292 (1553)
.+.++|.+||+.||.+||++. ++++|
T Consensus 222 ~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h 251 (325)
T cd05604 222 TAWSILEELLEKDRQRRLGAKEDFLEIQEH 251 (325)
T ss_pred HHHHHHHHHhccCHHhcCCCCCCHHHHhcC
Confidence 899999999999999999875 66665
No 100
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=3.5e-33 Score=340.01 Aligned_cols=244 Identities=19% Similarity=0.257 Sum_probs=192.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
+|++.+.||+|+||.||+|.+.. ..||||++.+.. ........+.+|..+++.++||||+++++++...
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 25 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF---QNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred ceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccc---cCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 79999999999999999999853 669999986542 1123345566788899999999999999887543
Q ss_pred CEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 98 KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
...|+||||++++|.+.+.. .+++.++..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 102 ~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 179 (364)
T cd07875 102 QDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 179 (364)
T ss_pred CeEEEEEeCCCCCHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCC
Confidence 35799999999999998864 3789999999999999999999999999999999999999999999999998754211
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHh--
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRR-- 251 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~-- 251 (1553)
.......+++.|+|||.+. +..++.++|||||||++|+|++|.+||...+... +..
T Consensus 180 --------~~~~~~~~t~~y~aPE~~~----------~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~ 241 (364)
T cd07875 180 --------FMMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241 (364)
T ss_pred --------CcccCCcccCCcCCHHHHh----------CCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 1123345788999999774 3457889999999999999999999996432211 000
Q ss_pred --------------------c--CCC--------------CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 --------------------G--QYD--------------PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 --------------------~--~~~--------------~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
. .+. .........+..+++||.+||+.||.+|||++|+|+|
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 242 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred CCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 0 000 0001112234578999999999999999999999998
No 101
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=4e-33 Score=333.57 Aligned_cols=248 Identities=17% Similarity=0.179 Sum_probs=195.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~~~~l 102 (1553)
+|.+.+.||+|+||.||+|++.. ..||+|++.+.... .....+.+..|..+++.+. ||+|+++++++++++..|+
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l 78 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVI--QDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYF 78 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEE
Confidence 36788999999999999999863 57999999764111 1122334556667777765 5778889999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||++ |+|.+++...+.+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 v~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~-- 156 (323)
T cd05615 79 VMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGV-- 156 (323)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCc--
Confidence 999998 69999998877899999999999999999999999999999999999999999999999999875321111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~ 261 (1553)
......|++.|+|||.+. +..++.++||||+||++|||++|.+||...................+
T Consensus 157 -----~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p 221 (323)
T cd05615 157 -----TTRTFCGTPDYIAPEIIA----------YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP 221 (323)
T ss_pred -----cccCccCCccccCHHHHc----------CCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 112345789999999764 34578899999999999999999999976544333222222222344
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCH-----HHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSA-----ESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa-----~elL~~ 292 (1553)
...+..+++++.+||+.||.+|+++ +++++|
T Consensus 222 ~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h 257 (323)
T cd05615 222 KSLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREH 257 (323)
T ss_pred ccCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcC
Confidence 4556789999999999999999974 566655
No 102
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-34 Score=329.71 Aligned_cols=252 Identities=17% Similarity=0.155 Sum_probs=206.4
Q ss_pred EEEEEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 28 VLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 28 ~~~~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
.-++-||+|+.|-||+++..++.||||.+..- -+.+++-|+.|+||||+.|.++|...-.+|||||||
T Consensus 127 sELeWlGSGaQGAVF~Grl~netVAVKKV~el------------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfC 194 (904)
T KOG4721|consen 127 SELEWLGSGAQGAVFLGRLHNETVAVKKVREL------------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFC 194 (904)
T ss_pred hhhhhhccCcccceeeeeccCceehhHHHhhh------------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeecc
Confidence 34567999999999999999999999987311 123446788999999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
. |-|+..|+.+..++......|..+|+.|+.|||.+.|||||||.-||||+.+..|||+|||.++... +.+.
T Consensus 195 a~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~-------~~ST 267 (904)
T KOG4721|consen 195 AQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELS-------DKST 267 (904)
T ss_pred ccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhh-------hhhh
Confidence 9 8999999999899999999999999999999999999999999999999999999999999887542 1111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCC--CCCCCCCCC
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYD--PSQHLEKIP 264 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~--~~~~~~~~~ 264 (1553)
.-..+||..|||||++. ..+.++|+||||||||||||+||.-||..-+..++.-+.-. .....+...
T Consensus 268 -kMSFaGTVaWMAPEvIr----------nePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGsNsL~LpvPstc 336 (904)
T KOG4721|consen 268 -KMSFAGTVAWMAPEVIR----------NEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGSNSLHLPVPSTC 336 (904)
T ss_pred -hhhhhhhHhhhCHHHhh----------cCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccCCcccccCcccC
Confidence 12346899999999765 56889999999999999999999999975554444433332 222345566
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHHHhhhcccCCCCCCchhhhhh
Q 000410 265 DSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPFLHNFY 310 (1553)
Q Consensus 265 ~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fP~~f~~fl~~~~ 310 (1553)
++.++-||++||+..|..||++.++|.||. +.-|+.|..--..|+
T Consensus 337 P~GfklL~Kqcw~sKpRNRPSFrqil~Hld-Ia~pell~~tee~yf 381 (904)
T KOG4721|consen 337 PDGFKLLLKQCWNSKPRNRPSFRQILLHLD-IASPELLSTTEETYF 381 (904)
T ss_pred chHHHHHHHHHHhcCCCCCccHHHHHHHHh-hcCHHHhcccHHHHH
Confidence 779999999999999999999999999963 455565554333344
No 103
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=5.9e-33 Score=329.40 Aligned_cols=250 Identities=17% Similarity=0.173 Sum_probs=193.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC------------------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE------------------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHV 87 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~------------------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnI 87 (1553)
+|++.+.||+|+||.||+|.+.+ ..||+|++.... .......+.+|+.+++.++||||
T Consensus 6 ~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~ni 81 (304)
T cd05096 6 HLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA----NKNARNDFLKEVKILSRLKDPNI 81 (304)
T ss_pred hCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC----CHHHHHHHHHHHHHHhhcCCCCe
Confidence 78999999999999999997532 259999886431 23445668888999999999999
Q ss_pred eEEEEEEEeCCEEEEEecccc-CCHHHHhcCC-------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 000410 88 WAFQFWQETDKAAYLLRQYFF-NSLRDRLSTP-------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICH 147 (1553)
Q Consensus 88 v~~~~~~~~~~~~~lV~E~~~-gsL~d~l~~~-------------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvH 147 (1553)
+++++++.+....|+||||+. |+|.+++... ..+++.++..++.||+.||.|||++||+|
T Consensus 82 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH 161 (304)
T cd05096 82 IRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVH 161 (304)
T ss_pred eEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 999999999999999999998 6999988543 23677889999999999999999999999
Q ss_pred cCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHH
Q 000410 148 GDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAV 227 (1553)
Q Consensus 148 rDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSl 227 (1553)
|||||+|||++.++.+||+|||+++..... +.........++..|+|||.+. ...++.++|||||
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~sl 226 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAG-----DYYRIQGRAVLPIRWMAWECIL----------MGKFTTASDVWAF 226 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccC-----ceeEecCcCCCCccccCHHHHh----------cCCCCchhhhHHH
Confidence 999999999999999999999998754221 1111222334567899999764 3457889999999
Q ss_pred HHHHHHHHcC--CCCCCchHHHHH--------HhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 228 GCVIAELFLE--VPFFELSHLLAY--------RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 228 G~il~eLltg--~~pf~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
||++|||+++ ..||........ ...........+...+..+.+||.+||+.||++|||++++.+.++
T Consensus 227 G~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 227 GVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred HHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 9999999874 667753222111 111111111122334578999999999999999999999987653
No 104
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=4.1e-33 Score=327.88 Aligned_cols=246 Identities=23% Similarity=0.240 Sum_probs=186.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHH---hcCCCCCeeEEEEEEEe----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETF---RSIDHPHVWAFQFWQET---- 96 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l---~~l~hpnIv~~~~~~~~---- 96 (1553)
+|++.+.||+|+||.||+|++.. +.||+|++......... .....+|..++ +.++||||+++++++..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~---~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~ 77 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGL---PLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTD 77 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCC---chHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCC
Confidence 48899999999999999999864 56999998654211111 11122333444 44579999999998764
Q ss_pred -CCEEEEEeccccCCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccc
Q 000410 97 -DKAAYLLRQYFFNSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKP 173 (1553)
Q Consensus 97 -~~~~~lV~E~~~gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~ 173 (1553)
....+++|||+.++|.+++... +.+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++..
T Consensus 78 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~ 157 (288)
T cd07863 78 RETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARI 157 (288)
T ss_pred CCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCcccc
Confidence 3458999999999999988653 3489999999999999999999999999999999999999999999999998875
Q ss_pred ccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH----HH
Q 000410 174 TYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----AY 249 (1553)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~----~~ 249 (1553)
..... ......+++.|+|||.+. +..++.++||||+||++|+|++|.+||...... ++
T Consensus 158 ~~~~~--------~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~ 219 (288)
T cd07863 158 YSCQM--------ALTPVVVTLWYRAPEVLL----------QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKI 219 (288)
T ss_pred ccCcc--------cCCCccccccccCchHhh----------CCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHH
Confidence 42111 112234688899999774 345788999999999999999999999643221 11
Q ss_pred HhcC------------------CCCC-----CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 250 RRGQ------------------YDPS-----QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 250 ~~~~------------------~~~~-----~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.... +... .......++.++++|.+||+.||++|||+.|+++|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~h 285 (288)
T cd07863 220 FDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQH 285 (288)
T ss_pred HHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 1100 0000 00111235678999999999999999999999988
No 105
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=3.7e-33 Score=334.41 Aligned_cols=243 Identities=18% Similarity=0.230 Sum_probs=193.0
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||+|+||+||+|++.. ..||+|++.+.. .......+.+.+|..++..+ +||||+++++++++.+..|+||||+
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 78 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKEL--VHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYV 78 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHH--hhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCC
Confidence 479999999999999864 569999997642 11223345567777888777 6999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ |+|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 79 ~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~------- 151 (327)
T cd05617 79 NGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD------- 151 (327)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC-------
Confidence 8 69999998777799999999999999999999999999999999999999999999999998874322111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch-------HHHHHHhcCCCCCCC
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS-------HLLAYRRGQYDPSQH 259 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~-------~~~~~~~~~~~~~~~ 259 (1553)
...+..|++.|+|||.+. +..++.++|||||||++|||++|.+||... ......+........
T Consensus 152 ~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (327)
T cd05617 152 TTSTFCGTPNYIAPEILR----------GEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIR 221 (327)
T ss_pred ceecccCCcccCCHHHHC----------CCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCC
Confidence 123456789999999764 346788999999999999999999999521 111111111111223
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCH------HHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSA------ESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa------~elL~~ 292 (1553)
++...+..+.++|.+||+.||++|+++ +++++|
T Consensus 222 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h 260 (327)
T cd05617 222 IPRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSH 260 (327)
T ss_pred CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcC
Confidence 455567889999999999999999984 688877
No 106
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=1.8e-33 Score=349.52 Aligned_cols=241 Identities=20% Similarity=0.245 Sum_probs=187.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
+|++.+.||+|+||.||+|.+.. ..||||++.... ....+|+.+++.++||||+++++++...
T Consensus 67 ~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~ 137 (440)
T PTZ00036 67 SYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---------QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNE 137 (440)
T ss_pred eEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---------chHHHHHHHHHhcCCCCCcceeeeEeecccccCC
Confidence 79999999999999999999853 679999885431 1123577899999999999998876432
Q ss_pred --CEEEEEeccccCCHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC-cEEEeecCc
Q 000410 98 --KAAYLLRQYFFNSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-WLYLSDFAS 170 (1553)
Q Consensus 98 --~~~~lV~E~~~gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~-~vkL~DFG~ 170 (1553)
..+++||||++++|.+++. ....+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+
T Consensus 138 ~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGl 217 (440)
T PTZ00036 138 KNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGS 217 (440)
T ss_pred CceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeecccc
Confidence 2577999999999888764 345699999999999999999999999999999999999999665 699999999
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL---- 246 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~---- 246 (1553)
++....... .....|++.|+|||++.+ ...++.++|||||||++|||++|.+||.....
T Consensus 218 a~~~~~~~~--------~~~~~~t~~y~aPE~~~~---------~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~ 280 (440)
T PTZ00036 218 AKNLLAGQR--------SVSYICSRFYRAPELMLG---------ATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQL 280 (440)
T ss_pred chhccCCCC--------cccCCCCcCccCHHHhcC---------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence 975422111 112356888999998742 23578899999999999999999999975421
Q ss_pred HHHHhcC--------------C-----CC------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 247 LAYRRGQ--------------Y-----DP------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 247 ~~~~~~~--------------~-----~~------~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+.+.. + .. ...++...++++++||.+||+.||.+|||+.|+|+|
T Consensus 281 ~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 281 VRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred HHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 1111100 0 00 001222345789999999999999999999999998
No 107
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=1.6e-33 Score=343.85 Aligned_cols=249 Identities=22% Similarity=0.250 Sum_probs=197.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK----- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~----- 98 (1553)
+|++.+.||+|+||.||++.+. +..||+|++.+.. ......+++.+|+++++.++||||+++++++....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 77 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVF---QNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFE 77 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccc---cchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccc
Confidence 4678899999999999999975 4679999985431 11223456778889999999999999999998776
Q ss_pred EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 99 AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 99 ~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
..|+||||+.++|.+++.....+++.+++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus 78 ~~~lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~ 157 (372)
T cd07853 78 EIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDE 157 (372)
T ss_pred eEEEEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCc
Confidence 78999999999999999888889999999999999999999999999999999999999999999999999987542211
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HH----
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YR---- 250 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~---- 250 (1553)
........+++.|+|||.+.+ ...++.++||||+||++|||++|++||....... +.
T Consensus 158 ------~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g 222 (372)
T cd07853 158 ------SKHMTQEVVTQYYRAPEILMG---------SRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLG 222 (372)
T ss_pred ------cccCCCCCcCCCcCCHHHHcC---------CCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcC
Confidence 111223346788999998742 2346889999999999999999999996432111 00
Q ss_pred -------------------hcCCCCCC-----CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 251 -------------------RGQYDPSQ-----HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 251 -------------------~~~~~~~~-----~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.....+.. .+....++.+.+||.+||+.||++|||++|+|+|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 223 TPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred CCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00011100 1222336789999999999999999999999998
No 108
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=6.1e-33 Score=337.84 Aligned_cols=252 Identities=18% Similarity=0.214 Sum_probs=198.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++.. ..+|+|++.+... ......+.+.+|+.+++.++||||+++++.+.++...|+|
T Consensus 44 ~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (371)
T cd05622 44 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM--IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 121 (371)
T ss_pred hcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHh--hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 89999999999999999999964 5699999865311 1122344577888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ |+|.+++.... +++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 122 ~Ey~~gg~L~~~~~~~~-~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~---- 196 (371)
T cd05622 122 MEYMPGGDLVNLMSNYD-VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG---- 196 (371)
T ss_pred EcCCCCCcHHHHHHhcC-CCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC----
Confidence 99998 69999987654 8999999999999999999999999999999999999999999999999987542111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~ 258 (1553)
.....+..||+.|+|||++.... ....++.++|||||||++|||++|.+||....... +.........
T Consensus 197 --~~~~~~~~gt~~y~aPE~l~~~~------~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~ 268 (371)
T cd05622 197 --MVRCDTAVGTPDYISPEVLKSQG------GDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTF 268 (371)
T ss_pred --cccccCcccCccccCHHHHhccC------CCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccC
Confidence 11123456899999999885321 12347889999999999999999999997655432 2222111111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 292 (1553)
......+..++++|.+||..++.+ |++++++++|
T Consensus 269 ~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 269 PDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 112234678999999999844433 7799999998
No 109
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=3.5e-33 Score=327.61 Aligned_cols=251 Identities=14% Similarity=0.125 Sum_probs=199.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+|++.+.||+|+||.||+|.+.+ ..|++|.+... ........+.+|+.+++.++||||+++++++....
T Consensus 6 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~----~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~ 81 (283)
T cd05048 6 AVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN----AEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ 81 (283)
T ss_pred HcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccC----CCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC
Confidence 78999999999999999998743 35899987543 22344566888889999999999999999999999
Q ss_pred EEEEEecccc-CCHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 161 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~ 161 (1553)
..|++|||++ ++|.+++... ..+++.++..++.||+.||.|||++|++||||||+||++++++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGL 161 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCC
Confidence 9999999999 6999998653 4578899999999999999999999999999999999999999
Q ss_pred cEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCC
Q 000410 162 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPF 240 (1553)
Q Consensus 162 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~p 240 (1553)
.++|+|||+++...... .........+++.|+|||.+. ...++.++|||||||++|||++ |..|
T Consensus 162 ~~~L~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~sDv~slG~il~el~~~g~~p 226 (283)
T cd05048 162 TVKISDFGLSRDIYSAD-----YYRVQSKSLLPVRWMPPEAIL----------YGKFTTESDIWSFGVVLWEIFSYGLQP 226 (283)
T ss_pred cEEECCCcceeeccccc-----cccccCCCcccccccCHHHhc----------cCcCchhhhHHHHHHHHHHHHcCCCCC
Confidence 99999999987553221 111122334577899999764 3457889999999999999998 8888
Q ss_pred CCchHHHHHHhcC-CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 241 FELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 241 f~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
|.......+.... .......+...++.+.+|+.+||+.||++||++.|++++++.
T Consensus 227 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 227 YYGFSNQEVIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred CCCCCHHHHHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 7643332222111 111112334456799999999999999999999999998753
No 110
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.8e-33 Score=351.73 Aligned_cols=242 Identities=18% Similarity=0.215 Sum_probs=184.3
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC------CCCCeeEEEEEEEe
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI------DHPHVWAFQFWQET 96 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l------~hpnIv~~~~~~~~ 96 (1553)
.+|++.+.||+|+||+||+|.+.. +.||||++.+.. ........|+.+++.+ +|++++++++++..
T Consensus 129 ~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~------~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 129 QRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP------KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred CcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch------hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 379999999999999999998854 569999985431 1222233344444444 45668999998876
Q ss_pred C-CEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCC-------------
Q 000410 97 D-KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWN------------- 161 (1553)
Q Consensus 97 ~-~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~------------- 161 (1553)
+ ..+|+|||++.++|.+++.+++.+++.+++.|+.||+.||+|||+ .||+||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~ 282 (467)
T PTZ00284 203 ETGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPP 282 (467)
T ss_pred CCceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCC
Confidence 4 578999999999999999888889999999999999999999998 5999999999999998765
Q ss_pred ---cEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCC
Q 000410 162 ---WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 238 (1553)
Q Consensus 162 ---~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 238 (1553)
.+||+|||.+..... ......||+.|+|||++. +..++.++|||||||++|||++|+
T Consensus 283 ~~~~vkl~DfG~~~~~~~----------~~~~~~gt~~Y~APE~~~----------~~~~~~~~DiwSlGvil~elltG~ 342 (467)
T PTZ00284 283 DPCRVRICDLGGCCDERH----------SRTAIVSTRHYRSPEVVL----------GLGWMYSTDMWSMGCIIYELYTGK 342 (467)
T ss_pred CCceEEECCCCccccCcc----------ccccccCCccccCcHHhh----------cCCCCcHHHHHHHHHHHHHHHhCC
Confidence 499999998753211 112346789999999875 346788999999999999999999
Q ss_pred CCCCchHHHH----HHh--cCC-----------------------CCC-------------CCCCCCCCHHHHHHHHHhc
Q 000410 239 PFFELSHLLA----YRR--GQY-----------------------DPS-------------QHLEKIPDSGIRKMILHMI 276 (1553)
Q Consensus 239 ~pf~~~~~~~----~~~--~~~-----------------------~~~-------------~~~~~~~~~~l~~LI~~mL 276 (1553)
+||+...... +.. +.. .+. .....+.++.+.+||.+||
T Consensus 343 ~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL 422 (467)
T PTZ00284 343 LLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLL 422 (467)
T ss_pred CCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhC
Confidence 9996433211 100 000 000 0001122456789999999
Q ss_pred ccCcCCCCCHHHHHHh
Q 000410 277 QLEPELRFSAESYLQN 292 (1553)
Q Consensus 277 ~~dP~~Rpsa~elL~~ 292 (1553)
+.||++|||++|+|+|
T Consensus 423 ~~dP~~R~ta~e~L~H 438 (467)
T PTZ00284 423 HYDRQKRLNARQMTTH 438 (467)
T ss_pred CcChhhCCCHHHHhcC
Confidence 9999999999999998
No 111
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.7e-33 Score=341.79 Aligned_cols=243 Identities=19% Similarity=0.155 Sum_probs=193.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
+|.+.+.||.|+||.||+|...+ ..|++|.+.+. ....+|+++++.++||||+++++++..+...|
T Consensus 93 ~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~ 162 (392)
T PHA03207 93 QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----------KTPGREIDILKTISHRAIINLIHAYRWKSTVC 162 (392)
T ss_pred ceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEE
Confidence 69999999999999999997643 45888887543 12346778999999999999999999999999
Q ss_pred EEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 102 LLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 102 lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
++||++.++|.+++...+.+++.+++.|+.||+.||.|||++||+||||||+|||++.++.++|+|||+++........+
T Consensus 163 lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~ 242 (392)
T PHA03207 163 MVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTP 242 (392)
T ss_pred EEehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccc
Confidence 99999999999999777789999999999999999999999999999999999999999999999999987543221111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-------HHHHHhc--
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-------LLAYRRG-- 252 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-------~~~~~~~-- 252 (1553)
......|++.|+|||++. ...++.++|||||||++|||++|..||.... +..+.+.
T Consensus 243 -----~~~~~~gt~~y~aPE~~~----------~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~ 307 (392)
T PHA03207 243 -----QCYGWSGTLETNSPELLA----------LDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQ 307 (392)
T ss_pred -----cccccccccCccCHhHhc----------CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhc
Confidence 112345789999999774 3457889999999999999999977774321 1111110
Q ss_pred ---------------------CC--CCCCCCC-----CCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 253 ---------------------QY--DPSQHLE-----KIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 253 ---------------------~~--~~~~~~~-----~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.. .+...++ ...+.+++++|.+||..||++||++.|+|.|-
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p 376 (392)
T PHA03207 308 VHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLP 376 (392)
T ss_pred cCccccCCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCc
Confidence 00 0000011 12345789999999999999999999999993
No 112
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=1.4e-32 Score=318.58 Aligned_cols=253 Identities=20% Similarity=0.208 Sum_probs=203.8
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+. +..+++|++...............+.+|+++++.++||||++++++++++...|+|
T Consensus 3 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 82 (263)
T cd06625 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSIF 82 (263)
T ss_pred cccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEEE
Confidence 6889999999999999999875 36799999876532222333445688889999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||++ ++|.+++...+.+++..++.++.|++.||.|||+.||+||||||+||+++.++.++|+|||.++.........
T Consensus 83 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~- 161 (263)
T cd06625 83 MEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG- 161 (263)
T ss_pred EEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccccc-
Confidence 99998 5999999887789999999999999999999999999999999999999999999999999986542211110
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HHHHh-cCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LAYRR-GQYDPSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~~~~-~~~~~~~~~ 260 (1553)
.......++..|+|||.+. +..++.++||||+||++|||++|++||...+. ..+.. ........+
T Consensus 162 ---~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 228 (263)
T cd06625 162 ---TGMKSVTGTPYWMSPEVIS----------GEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNPQL 228 (263)
T ss_pred ---ccccCCCcCccccCcceec----------cCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCCCCC
Confidence 0112234677899999764 33478899999999999999999999864332 22222 112222335
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+...+..+.++|.+||..+|++||++.++++|
T Consensus 229 ~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 229 PSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred CccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 55667899999999999999999999999998
No 113
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=9.7e-33 Score=323.45 Aligned_cols=241 Identities=16% Similarity=0.153 Sum_probs=191.9
Q ss_pred eeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-C
Q 000410 33 LGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF-N 109 (1553)
Q Consensus 33 LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~-g 109 (1553)
||+|+||+||++.+. ++.||+|++.+... ......+.+..|+++++.++||||+++++++..+...|+||||++ |
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g 78 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRL--KKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGG 78 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHH--hhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCC
Confidence 699999999999885 36799999865421 112233456678889999999999999999999999999999998 6
Q ss_pred CHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcc
Q 000410 110 SLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFS 185 (1553)
Q Consensus 110 sL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~ 185 (1553)
+|.+++. ..+.+++.+++.++.||+.||+|||++||+||||||+||+++.++.++|+|||.+........
T Consensus 79 ~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~------ 152 (280)
T cd05608 79 DLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS------ 152 (280)
T ss_pred CHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc------
Confidence 9987773 335689999999999999999999999999999999999999999999999999865422111
Q ss_pred eeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHHHHhcCCCCCCCCC
Q 000410 186 FFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 186 ~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~~~~~~~~~~~~~~ 261 (1553)
......|++.|+|||.+. +..++.++||||+||++|||++|+.||.... ...............+
T Consensus 153 -~~~~~~g~~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 221 (280)
T cd05608 153 -KTKGYAGTPGFMAPELLQ----------GEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYP 221 (280)
T ss_pred -cccccCCCcCccCHHHhc----------CCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCc
Confidence 112345788999999764 3467889999999999999999999996432 1222222222222344
Q ss_pred CCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
...++.+++++.+||+.||++|| +++++++|
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 222 DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 45567899999999999999999 88999988
No 114
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=4.3e-33 Score=338.64 Aligned_cols=254 Identities=20% Similarity=0.248 Sum_probs=198.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++.. ..||+|++.+.. .........+..|+.++..++||||+++++.+++++..|+|
T Consensus 2 ~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv 79 (360)
T cd05627 2 DFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKAD--MLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLI 79 (360)
T ss_pred CceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHH--HhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 68899999999999999999864 669999997541 11233455678888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCC---
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD--- 179 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~--- 179 (1553)
|||++ |+|.+++..++.+++..++.++.|++.||+|||++||+||||||+|||++.+|.++|+|||+++.......
T Consensus 80 ~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~ 159 (360)
T cd05627 80 MEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEF 159 (360)
T ss_pred EeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCccccccccccc
Confidence 99999 59999998888899999999999999999999999999999999999999999999999998864321100
Q ss_pred -------CCCCcc------------------eeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHH
Q 000410 180 -------DPSDFS------------------FFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 234 (1553)
Q Consensus 180 -------~~~~~~------------------~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 234 (1553)
.+.++. ....+..||+.|+|||++. +..++.++|||||||++|||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~----------~~~~~~~~DiwSlGvilyel 229 (360)
T cd05627 160 YRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFM----------QTGYNKLCDWWSLGVIMYEM 229 (360)
T ss_pred ccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHc----------CCCCCCcceeccccceeeec
Confidence 000000 0011346899999999774 34678899999999999999
Q ss_pred HcCCCCCCchHHHHHHhcCC--CCCCCCC--CCCCHHHHHHHHHhcccCcCCCC---CHHHHHHh
Q 000410 235 FLEVPFFELSHLLAYRRGQY--DPSQHLE--KIPDSGIRKMILHMIQLEPELRF---SAESYLQN 292 (1553)
Q Consensus 235 ltg~~pf~~~~~~~~~~~~~--~~~~~~~--~~~~~~l~~LI~~mL~~dP~~Rp---sa~elL~~ 292 (1553)
++|.+||............. .....++ ...++.+++||.+|+. ||.+|+ +++++++|
T Consensus 230 ~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~h 293 (360)
T cd05627 230 LIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSH 293 (360)
T ss_pred ccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcC
Confidence 99999997554333211111 1111111 1246789999999874 999998 47899988
No 115
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1e-32 Score=346.59 Aligned_cols=249 Identities=21% Similarity=0.185 Sum_probs=199.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK----- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~----- 98 (1553)
+|++.+.||+|+||+||+|++. +..||||++..... .......+.+|+.++..++|+||+++++.+....
T Consensus 33 rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~---~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 33 KYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGM---SEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred CEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccC---CHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 8999999999999999999874 46799999866421 1233456778888999999999999987764322
Q ss_pred ---EEEEEecccc-CCHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCc
Q 000410 99 ---AAYLLRQYFF-NSLRDRLSTP----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFAS 170 (1553)
Q Consensus 99 ---~~~lV~E~~~-gsL~d~l~~~----~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~ 170 (1553)
..++||||+. |+|.+++..+ ..+++.++..++.|++.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGl 189 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGF 189 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEeccc
Confidence 4789999999 6999988642 4589999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHH
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYR 250 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~ 250 (1553)
++........ ....+..|++.|+|||.+. +..++.++|||||||++|||++|.+||.........
T Consensus 190 s~~~~~~~~~-----~~~~~~~Gt~~Y~aPE~~~----------~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~ 254 (496)
T PTZ00283 190 SKMYAATVSD-----DVGRTFCGTPYYVAPEIWR----------RKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVM 254 (496)
T ss_pred Ceeccccccc-----cccccccCCcceeCHHHhC----------CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence 8754321111 1123456889999999774 346789999999999999999999999866554332
Q ss_pred hcCCC-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 251 RGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 251 ~~~~~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..... ....++...++.+.++|.+||+.||.+||++.++++|
T Consensus 255 ~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 255 HKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HHHhcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 22111 1122444556889999999999999999999999998
No 116
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=4.4e-33 Score=332.54 Aligned_cols=243 Identities=21% Similarity=0.261 Sum_probs=183.8
Q ss_pred EEEeeccCcEEEEEEEECC----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe--CCEEEEE
Q 000410 30 KEVLGGSRFFKSILCKHDE----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET--DKAAYLL 103 (1553)
Q Consensus 30 ~~~LG~G~fg~V~~a~~~~----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~--~~~~~lV 103 (1553)
.++||+|+||.||+|++.+ ..||+|++..... ...+.+|+.+++.++||||+++++++.. +...|++
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv 78 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-------SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 78 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-------cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEE
Confidence 4689999999999998753 5699998854321 1235678899999999999999998854 5678999
Q ss_pred eccccCCHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEe----cCCcEEEeecCc
Q 000410 104 RQYFFNSLRDRLSTP---------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT----SWNWLYLSDFAS 170 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~---------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~----~~~~vkL~DFG~ 170 (1553)
|||++++|.+++... ..+++..++.++.||+.||+|||++||+||||||+|||++ ..+.+||+|||+
T Consensus 79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 79 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred EeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 999999999887421 2489999999999999999999999999999999999994 457899999999
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-----
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----- 245 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----- 245 (1553)
++....+.... .......+|+.|+|||.+.+ ...++.++||||+||++|||++|.+||...+
T Consensus 159 a~~~~~~~~~~----~~~~~~~~t~~y~aPE~~~~---------~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~ 225 (317)
T cd07868 159 ARLFNSPLKPL----ADLDPVVVTFWYRAPELLLG---------ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKT 225 (317)
T ss_pred eeccCCCCccc----cccCCccccccccCCHHHcC---------CCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccc
Confidence 87543221111 11234467889999998752 2357889999999999999999999995321
Q ss_pred --------HHHHHhc----------------------------CCCCCC------CCCCCCCHHHHHHHHHhcccCcCCC
Q 000410 246 --------LLAYRRG----------------------------QYDPSQ------HLEKIPDSGIRKMILHMIQLEPELR 283 (1553)
Q Consensus 246 --------~~~~~~~----------------------------~~~~~~------~~~~~~~~~l~~LI~~mL~~dP~~R 283 (1553)
+..+... ...... ......+..+.+||.+||+.||.+|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R 305 (317)
T cd07868 226 SNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKR 305 (317)
T ss_pred cccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccC
Confidence 1111000 000000 0001224568899999999999999
Q ss_pred CCHHHHHHh
Q 000410 284 FSAESYLQN 292 (1553)
Q Consensus 284 psa~elL~~ 292 (1553)
||++|+|+|
T Consensus 306 ~t~~e~l~h 314 (317)
T cd07868 306 ITSEQAMQD 314 (317)
T ss_pred CCHHHHhcC
Confidence 999999998
No 117
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.2e-32 Score=330.74 Aligned_cols=244 Identities=14% Similarity=0.120 Sum_probs=196.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||++.+.. ..+|+|++.... .......+.+|+++++.++||||+++++++.+++..|+|
T Consensus 6 ~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 81 (333)
T cd06650 6 DFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI----KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISIC 81 (333)
T ss_pred hhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc----CHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEE
Confidence 78999999999999999999964 568888875431 133456688899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK-GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~-gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||+. |+|.+++...+.+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++.......
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--- 158 (333)
T cd06650 82 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 158 (333)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc---
Confidence 99998 59999998877899999999999999999999985 79999999999999999999999999886442111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhc-------C-
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRG-------Q- 253 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~-------~- 253 (1553)
.....|+..|+|||.+. +..++.++|||||||++|+|++|..||........... .
T Consensus 159 ------~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 222 (333)
T cd06650 159 ------ANSFVGTRSYMSPERLQ----------GTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDP 222 (333)
T ss_pred ------cccCCCCccccCHHHhc----------CCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCc
Confidence 12235788899999764 34578899999999999999999888864332211100 0
Q ss_pred -------------------------------------CCCCCCC-CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 -------------------------------------YDPSQHL-EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 -------------------------------------~~~~~~~-~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
....+.. ....+.++++||.+||+.||++|||++|+++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 223 AESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred cccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 0000001 11245689999999999999999999999988
No 118
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=1.2e-32 Score=323.66 Aligned_cols=247 Identities=17% Similarity=0.215 Sum_probs=197.1
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|++.+.||+|+||+||++.+. ++.||+|++.+... ........+.+|+.+++.++||||+++++.+.++...|+|
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 78 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI--KKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 78 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhh--hhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEE
Confidence 3788999999999999999985 46799999865311 1122334566788999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||++ |+|.+++... ..+++.++..++.|++.||.|||++||+||||||+||++++++.++|+|||++...... .
T Consensus 79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--~ 156 (285)
T cd05605 79 LTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEG--E 156 (285)
T ss_pred EeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCC--C
Confidence 99998 6998887543 45899999999999999999999999999999999999999999999999988653211 0
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HHHHhcCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRGQYDP 256 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~~~~~~~~~ 256 (1553)
......|++.|+|||.+. +..++.++||||+||++|||++|.+||..... ..+.......
T Consensus 157 ------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 220 (285)
T cd05605 157 ------TIRGRVGTVGYMAPEVVK----------NERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKED 220 (285)
T ss_pred ------ccccccCCCCccCcHHhc----------CCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhc
Confidence 112335788999999764 34578899999999999999999999975432 1222222222
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
....+...+..+++||.+||..||++|| +++++++|
T Consensus 221 ~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 221 QEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 2223444567899999999999999999 89999988
No 119
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=9.5e-33 Score=336.85 Aligned_cols=249 Identities=14% Similarity=0.154 Sum_probs=195.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~ 97 (1553)
+|++.+.||+|+||.||+|.+. +..||||++..... ....+.+.+|+.+++.+ +||||+++++++...
T Consensus 36 ~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~----~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~ 111 (375)
T cd05104 36 RLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH----LTEREALMSELKVLSYLGNHINIVNLLGACTVG 111 (375)
T ss_pred HeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC----cHHHHHHHHHHHHHHHhcCCcceeeeeeeeccC
Confidence 7999999999999999999742 24699999854321 22345677888999999 899999999999999
Q ss_pred CEEEEEecccc-CCHHHHhcCCC---------------------------------------------------------
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTPP--------------------------------------------------------- 119 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~~--------------------------------------------------------- 119 (1553)
...|+||||++ |+|.+++..+.
T Consensus 112 ~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (375)
T cd05104 112 GPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRS 191 (375)
T ss_pred CcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccccc
Confidence 99999999999 69999885421
Q ss_pred ------------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 120 ------------------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 120 ------------------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
.+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 192 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-- 269 (375)
T cd05104 192 GSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN-- 269 (375)
T ss_pred ceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCccc--
Confidence 367888999999999999999999999999999999999999999999999875422110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCch----HHHHHHhcCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELS----HLLAYRRGQYDP 256 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~----~~~~~~~~~~~~ 256 (1553)
. .......++..|+|||.+. +..++.++|||||||++|||++ |.+||... ...+........
T Consensus 270 --~-~~~~~~~~~~~y~aPE~~~----------~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~ 336 (375)
T cd05104 270 --Y-VVKGNARLPVKWMAPESIF----------NCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRM 336 (375)
T ss_pred --c-cccCCCCCCcceeChhHhc----------CCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccC
Confidence 0 1112233456799999764 3467889999999999999998 78888643 222222222221
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
..+...+.++++||.+||+.||++||++.|+++.++.
T Consensus 337 --~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~ 373 (375)
T cd05104 337 --LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQ 373 (375)
T ss_pred --CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHh
Confidence 1234456789999999999999999999999998753
No 120
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=4.7e-34 Score=307.72 Aligned_cols=252 Identities=21% Similarity=0.258 Sum_probs=196.4
Q ss_pred cceEEEEEeeccCcEEEEEEEECC------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe-C
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET-D 97 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~-~ 97 (1553)
+.|+..+.||+|.||+||+|...+ ..+|+|.|....+... ....-.+|+..++.++||||+.+..++.+ +
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tG---iS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d 100 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTG---ISMSACREIALLRELKHPNVISLVKVFLSHD 100 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCC---cCHHHHHHHHHHHHhcCCcchhHHHHHhccC
Confidence 379999999999999999996532 2589999975532211 22234566778999999999999998866 8
Q ss_pred CEEEEEeccccCCHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC----CcEEEeec
Q 000410 98 KAAYLLRQYFFNSLRDRLST-----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW----NWLYLSDF 168 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l~~-----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~----~~vkL~DF 168 (1553)
+.++|++||.+.+|+..|+- ...++...++.|+.||+.|+.|||++=|+||||||.||||..+ |.|||+||
T Consensus 101 ~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDl 180 (438)
T KOG0666|consen 101 KKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADL 180 (438)
T ss_pred ceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecc
Confidence 89999999999999999953 2358999999999999999999999999999999999999988 89999999
Q ss_pred CccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch----
Q 000410 169 ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS---- 244 (1553)
Q Consensus 169 G~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~---- 244 (1553)
|+++....|...- +..+....|.+|+|||.+.+ ...||++.|+||+|||++||++-+|.|.+.
T Consensus 181 GlaR~~~~plkpl----~s~d~VVVTiWYRAPELLLG---------a~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~ 247 (438)
T KOG0666|consen 181 GLARLFNNPLKPL----ASLDPVVVTIWYRAPELLLG---------ARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKI 247 (438)
T ss_pred cHHHHhhcccccc----ccCCceEEEEEecChHHhcc---------cccccchhhhHHHHHHHHHHHccCccccchhhhc
Confidence 9998876554332 12234456899999999864 347999999999999999999988877432
Q ss_pred ---------HHHHHHh----------------------------cCCCCCC-----CCCCCCCHHHHHHHHHhcccCcCC
Q 000410 245 ---------HLLAYRR----------------------------GQYDPSQ-----HLEKIPDSGIRKMILHMIQLEPEL 282 (1553)
Q Consensus 245 ---------~~~~~~~----------------------------~~~~~~~-----~~~~~~~~~l~~LI~~mL~~dP~~ 282 (1553)
++..+.. ..++... ...++.++...+|+.+||..||.+
T Consensus 248 ~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~k 327 (438)
T KOG0666|consen 248 KTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIK 327 (438)
T ss_pred ccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchh
Confidence 2222211 0011000 001223455889999999999999
Q ss_pred CCCHHHHHHh
Q 000410 283 RFSAESYLQN 292 (1553)
Q Consensus 283 Rpsa~elL~~ 292 (1553)
|.|++++|+|
T Consensus 328 RIta~qAleh 337 (438)
T KOG0666|consen 328 RITAEQALEH 337 (438)
T ss_pred hccHHHHhcc
Confidence 9999999998
No 121
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=9.9e-33 Score=336.35 Aligned_cols=249 Identities=16% Similarity=0.152 Sum_probs=196.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~ 97 (1553)
+|++.+.||+|+||.||+|++.. ..||+|++.... .......+.+|+.+++.+ +||||+++++++...
T Consensus 39 ~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~ 114 (374)
T cd05106 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASA----HTDEREALMSELKILSHLGQHKNIVNLLGACTHG 114 (374)
T ss_pred HceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCC----CHHHHHHHHHHHHHHHhhccCCceeeEeeEecCC
Confidence 69999999999999999998531 369999986542 123345677888999998 899999999999999
Q ss_pred CEEEEEecccc-CCHHHHhcCC----------------------------------------------------------
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTP---------------------------------------------------------- 118 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~---------------------------------------------------------- 118 (1553)
...|+||||+. |+|.+++...
T Consensus 115 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 115 GPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred CCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 99999999999 6999988432
Q ss_pred ------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 119 ------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 119 ------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
..+++.++..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++...... . ..
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~----~-~~ 269 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDS----N-YV 269 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCc----c-ee
Confidence 137788899999999999999999999999999999999999999999999987542211 1 11
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchH----HHHHHhcCCCCCCCCC
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH----LLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~----~~~~~~~~~~~~~~~~ 261 (1553)
...+..+++.|+|||.+. ...++.++|||||||++|||++ |.+||.... .......... ...+
T Consensus 270 ~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~--~~~~ 337 (374)
T cd05106 270 VKGNARLPVKWMAPESIF----------DCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQ--MSRP 337 (374)
T ss_pred eccCCCCccceeCHHHhc----------CCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccC--ccCC
Confidence 122333456799999764 3467899999999999999997 899996432 2222222222 1233
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
...++++.++|.+||+.||++||+++++++.++.
T Consensus 338 ~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~ 371 (374)
T cd05106 338 DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQR 371 (374)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 4456789999999999999999999999988653
No 122
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=1.3e-32 Score=325.99 Aligned_cols=247 Identities=20% Similarity=0.301 Sum_probs=196.1
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++. ++.||+|.+....... ....+.+|+.+++.++||||+++++++..++..|+|
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv 82 (301)
T cd07873 7 TYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEG----APCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLV 82 (301)
T ss_pred ceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccC----chhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEE
Confidence 7999999999999999999886 4679999986542221 123455678899999999999999999999999999
Q ss_pred eccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++++|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++.....+..
T Consensus 83 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~--- 159 (301)
T cd07873 83 FEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK--- 159 (301)
T ss_pred EeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC---
Confidence 999999999988653 4589999999999999999999999999999999999999999999999999875432211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----HhcC-----
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQ----- 253 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~----- 253 (1553)
......+++.|+|||.+.+ ...++.++|||||||++|||++|++||...+.... ....
T Consensus 160 ----~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~ 226 (301)
T cd07873 160 ----TYSNEVVTLWYRPPDILLG---------STDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTE 226 (301)
T ss_pred ----cccccceeecccCcHHHhC---------CCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCh
Confidence 1122345788999997742 23567899999999999999999999975432211 1000
Q ss_pred -----------C---CCC-------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 -----------Y---DPS-------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 -----------~---~~~-------~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+ ... .......++.+++||.+||+.||.+|||++|+++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 227 ETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred hhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0 000 00112345688999999999999999999999998
No 123
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.3e-32 Score=330.37 Aligned_cols=253 Identities=17% Similarity=0.209 Sum_probs=197.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++++.. +.||+|++.+... ......+.+.+|..+++.++||||++++++++++...|+|
T Consensus 2 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (331)
T cd05597 2 DFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEM--LKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLV 79 (331)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH--hhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEE
Confidence 68999999999999999999864 6799999975311 1122345577888899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||+. |+|.+++.. ...+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++........
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 157 (331)
T cd05597 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT-- 157 (331)
T ss_pred EecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC--
Confidence 99998 699999975 45699999999999999999999999999999999999999999999999998865422111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcC--CC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQ--YD 255 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~--~~ 255 (1553)
.......|++.|+|||++.... .....++.++||||+||++|||++|..||....... +.... ..
T Consensus 158 ----~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~ 228 (331)
T cd05597 158 ----VQSNVAVGTPDYISPEILQAME-----DGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQ 228 (331)
T ss_pred ----ccccceeccccccCHHHHhhcc-----ccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCccc
Confidence 0111235788999999885321 112457889999999999999999999997544322 11111 11
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHh
Q 000410 256 PSQHLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 292 (1553)
Q Consensus 256 ~~~~~~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 292 (1553)
... .....++.++++|.+||..++++ |++++++++|
T Consensus 229 ~~~-~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 229 FPP-DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCC-ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 111 11234678999999999764444 7899999998
No 124
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=3.7e-33 Score=335.05 Aligned_cols=242 Identities=19% Similarity=0.241 Sum_probs=188.3
Q ss_pred eeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC---CCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 33 LGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI---DHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 33 LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l---~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
||+|+||+||+|++.. ..||+|++.+.... . .........|..++... .||||++++++++++...|+||||+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~-~-~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~ 78 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIV-A-KKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYM 78 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHh-h-hhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCC
Confidence 7999999999999863 67999999754111 1 11122233344555544 6999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
. |+|.+++...+.+++.+++.++.||+.||+|||++||+||||||+|||++.++.++|+|||+++.......
T Consensus 79 ~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~------- 151 (330)
T cd05586 79 SGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK------- 151 (330)
T ss_pred CCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC-------
Confidence 8 69999998888899999999999999999999999999999999999999999999999999865321111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCC-CCCCCCCCCC
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYD-PSQHLEKIPD 265 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~-~~~~~~~~~~ 265 (1553)
......|++.|+|||.+.+ ...++.++|||||||++|+|++|..||.........+.... .........+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~---------~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~ 222 (330)
T cd05586 152 TTNTFCGTTEYLAPEVLLD---------EKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLS 222 (330)
T ss_pred CccCccCCccccCHHHHcC---------CCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCccCC
Confidence 1123457899999998742 23468899999999999999999999876554433222111 1111122456
Q ss_pred HHHHHHHHHhcccCcCCCC----CHHHHHHh
Q 000410 266 SGIRKMILHMIQLEPELRF----SAESYLQN 292 (1553)
Q Consensus 266 ~~l~~LI~~mL~~dP~~Rp----sa~elL~~ 292 (1553)
+.++++|.+||+.||.+|| +++++++|
T Consensus 223 ~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h 253 (330)
T cd05586 223 DEGRQFVKGLLNRNPQHRLGAHRDAVELKEH 253 (330)
T ss_pred HHHHHHHHHHcCCCHHHCCCCCCCHHHHhcC
Confidence 7899999999999999998 68888887
No 125
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.5e-32 Score=339.72 Aligned_cols=243 Identities=24% Similarity=0.258 Sum_probs=190.7
Q ss_pred ccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEE
Q 000410 24 SYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 24 ~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
..+|.+.+.||+|+||.||+|.+.+ ..||||.... ..+.+|+++|+.++||||+++++++..++..|
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~ 236 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTC 236 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEE
Confidence 4479999999999999999999975 5699996421 12456788999999999999999999999999
Q ss_pred EEeccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+|||++.++|.+++..+ ..+++.+++.|+.||+.||.|||++||+||||||+|||++.++.++|+|||+++.......
T Consensus 237 lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~- 315 (461)
T PHA03211 237 LVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS- 315 (461)
T ss_pred EEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc-
Confidence 99999999999998764 4599999999999999999999999999999999999999999999999999875421111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC-CCCCCch----------HHHHH
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELS----------HLLAY 249 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~pf~~~----------~~~~~ 249 (1553)
........||+.|+|||++. +..++.++|||||||++|||++| .++|... ++..+
T Consensus 316 ----~~~~~~~~GT~~Y~APE~~~----------~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~ 381 (461)
T PHA03211 316 ----TPFHYGIAGTVDTNAPEVLA----------GDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRI 381 (461)
T ss_pred ----cccccccCCCcCCcCHHHHc----------CCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHH
Confidence 11112345889999999774 34578899999999999999988 4455321 11111
Q ss_pred -HhcCCCCC----------------------------CCCCC--CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 250 -RRGQYDPS----------------------------QHLEK--IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 250 -~~~~~~~~----------------------------~~~~~--~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
........ ..+.. ..+..+++||.+||+.||.+|||+.|+|+|
T Consensus 382 i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 382 IRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred HHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 11111100 00110 123578999999999999999999999998
No 126
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2e-32 Score=321.27 Aligned_cols=250 Identities=14% Similarity=0.106 Sum_probs=197.0
Q ss_pred ceEEEEEeeccCcEEEEEEEEC------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~ 99 (1553)
+|++.+.||+|+||+||+|... ...+++|.+... ........+.+|.++++.++||||+++++++..+..
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 81 (283)
T cd05090 6 AVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDI----NNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQP 81 (283)
T ss_pred hceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCC----CCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCc
Confidence 6889999999999999999852 246899988643 223344567888899999999999999999999999
Q ss_pred EEEEecccc-CCHHHHhcCC-----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTP-----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 161 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~-----------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~ 161 (1553)
.|++|||++ ++|.+++..+ ..+++.++..++.|++.||.|||++||+||||||+|||++.++
T Consensus 82 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 82 VCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQL 161 (283)
T ss_pred eEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCC
Confidence 999999999 6999998532 2378889999999999999999999999999999999999999
Q ss_pred cEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCC
Q 000410 162 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPF 240 (1553)
Q Consensus 162 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~p 240 (1553)
.+||+|||+++...... .........++..|+|||.+. +..++.++|+|||||++|||++ |.+|
T Consensus 162 ~~kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el~~~g~~p 226 (283)
T cd05090 162 HVKISDLGLSREIYSAD-----YYRVQPKSLLPIRWMPPEAIM----------YGKFSSDSDIWSFGVVLWEIFSFGLQP 226 (283)
T ss_pred cEEeccccccccccCCc-----ceecccCCCccceecChHHhc----------cCCCCchhhhHHHHHHHHHHHcCCCCC
Confidence 99999999987653211 111223334466799999764 3457889999999999999998 8888
Q ss_pred CCchHHHHHHh-cCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 241 FELSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 241 f~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
|.......+.. .........+...++.+++++.+||+.||++||++.+++++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 227 YYGFSNQEVIEMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred CCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 86433222111 1111112234455678999999999999999999999999865
No 127
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=7.5e-34 Score=305.24 Aligned_cols=235 Identities=24% Similarity=0.250 Sum_probs=191.4
Q ss_pred EEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhc-CCCCCeeEEEEEEEe----CCEEEEE
Q 000410 31 EVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRS-IDHPHVWAFQFWQET----DKAAYLL 103 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~-l~hpnIv~~~~~~~~----~~~~~lV 103 (1553)
++||-|-.|+|..|.++. +.+|+|++.-. .. -++|++.--. -.|||||.++++|++ .+++.+|
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds------~K----ARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcLLiV 137 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS------PK----ARREVELHWMASGHPHIVSIIDVYENSYQGRKCLLIV 137 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcC------HH----HHhHhhhhhhhcCCCceEEeehhhhhhccCceeeEee
Confidence 689999999999998864 56999998432 22 2344443222 369999999999864 4678899
Q ss_pred ecccc-CCHHHHhcCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC---CcEEEeecCccccccCC
Q 000410 104 RQYFF-NSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW---NWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~---~~vkL~DFG~a~~~~~~ 177 (1553)
||.++ |.|+.+|..++. +++.++..|++||..|+.|||+.+|.||||||||+|.+.. ..+||+|||+||....+
T Consensus 138 mE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~ 217 (400)
T KOG0604|consen 138 MECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP 217 (400)
T ss_pred eecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCC
Confidence 99999 599999988765 9999999999999999999999999999999999999864 37999999999976322
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch--------HHHHH
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS--------HLLAY 249 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~--------~~~~~ 249 (1553)
....+.+-||+|.|||++. ..+|+..+|+||+|+++|-|++|.|||... -...+
T Consensus 218 --------~~L~TPc~TPyYvaPevlg----------~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI 279 (400)
T KOG0604|consen 218 --------GDLMTPCFTPYYVAPEVLG----------PEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRI 279 (400)
T ss_pred --------ccccCCcccccccCHHHhC----------chhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHh
Confidence 2345677899999999763 456899999999999999999999999422 23456
Q ss_pred HhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 250 RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+.+.|.....-....++..+++|+++|..+|.+|.|++++++|-
T Consensus 280 ~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~hp 323 (400)
T KOG0604|consen 280 RTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDHP 323 (400)
T ss_pred hccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcCc
Confidence 77888744433334467899999999999999999999999984
No 128
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=3.3e-31 Score=282.71 Aligned_cols=294 Identities=21% Similarity=0.314 Sum_probs=248.4
Q ss_pred eeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcE
Q 000410 1132 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGII 1211 (1553)
Q Consensus 1132 v~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I 1211 (1553)
..+|+||.+.|+++.|++|+++++|+|.||.+-|||.-+..|.. .....+..|..++|+|.|+.+|+|+-|...
T Consensus 48 rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~h------aipl~s~WVMtCA~sPSg~~VAcGGLdN~C 121 (343)
T KOG0286|consen 48 RRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVH------AIPLPSSWVMTCAYSPSGNFVACGGLDNKC 121 (343)
T ss_pred EEEecccccceeeeEecCCcCeEEeeccCCeEEEEEccccccee------EEecCceeEEEEEECCCCCeEEecCcCcee
Confidence 47899999999999999999999999999999999998766432 233445679999999999999999999999
Q ss_pred EEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCc
Q 000410 1212 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1291 (1553)
Q Consensus 1212 ~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g 1291 (1553)
.||++.+... .+...+.+....|..-+.++.|-.++ .|++++.|.++.+||+.+++.+..+.+ |.+
T Consensus 122 siy~ls~~d~--------~g~~~v~r~l~gHtgylScC~f~dD~----~ilT~SGD~TCalWDie~g~~~~~f~G--H~g 187 (343)
T KOG0286|consen 122 SIYPLSTRDA--------EGNVRVSRELAGHTGYLSCCRFLDDN----HILTGSGDMTCALWDIETGQQTQVFHG--HTG 187 (343)
T ss_pred EEEecccccc--------cccceeeeeecCccceeEEEEEcCCC----ceEecCCCceEEEEEcccceEEEEecC--Ccc
Confidence 9999973210 11112333345677788888898863 899999999999999999999999876 999
Q ss_pred ceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEE
Q 000410 1292 YVSSLVTGP-CGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLW 1370 (1553)
Q Consensus 1292 ~Itsl~~sp-~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vW 1370 (1553)
.|.++.++| +++++++|+.|+..++||+|.+.++.++.. |..-|+.+.| +|.+ .-+++|+.|+..++|
T Consensus 188 DV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~g-hesDINsv~f-fP~G---------~afatGSDD~tcRly 256 (343)
T KOG0286|consen 188 DVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEG-HESDINSVRF-FPSG---------DAFATGSDDATCRLY 256 (343)
T ss_pred cEEEEecCCCCCCeEEecccccceeeeeccCcceeEeecc-cccccceEEE-ccCC---------CeeeecCCCceeEEE
Confidence 999999999 999999999999999999999999999886 7778999998 6654 468999999999999
Q ss_pred EcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCCeEE-Ec
Q 000410 1371 NAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLL-TG 1449 (1553)
Q Consensus 1371 Dl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~ll-Tg 1449 (1553)
|++..+.+.+|.... ...+|++++|+-.|+|+ +|
T Consensus 257 DlRaD~~~a~ys~~~---------------------------------------------~~~gitSv~FS~SGRlLfag 291 (343)
T KOG0286|consen 257 DLRADQELAVYSHDS---------------------------------------------IICGITSVAFSKSGRLLFAG 291 (343)
T ss_pred eecCCcEEeeeccCc---------------------------------------------ccCCceeEEEcccccEEEee
Confidence 999988877776111 12379999999999766 88
Q ss_pred cCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeE
Q 000410 1450 GTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILS 1529 (1553)
Q Consensus 1450 g~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~ 1529 (1553)
..|.++.+||.-.++...++. +|.+.|++
T Consensus 292 y~d~~c~vWDtlk~e~vg~L~---------------------------------------------------GHeNRvSc 320 (343)
T KOG0286|consen 292 YDDFTCNVWDTLKGERVGVLA---------------------------------------------------GHENRVSC 320 (343)
T ss_pred ecCCceeEeeccccceEEEee---------------------------------------------------ccCCeeEE
Confidence 999999999987666554444 39999999
Q ss_pred EeeeecCCcEEEEEcCCceEEEcC
Q 000410 1530 LGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1530 va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
+ ..+++|-.++|||.|-.+|||-
T Consensus 321 l-~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 321 L-GVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred E-EECCCCcEEEecchhHheeecC
Confidence 9 7899999999999999999993
No 129
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=2.1e-32 Score=321.29 Aligned_cols=248 Identities=19% Similarity=0.284 Sum_probs=195.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++. +..||+|++...... +.....+.+|+.+++.++||||+++++++.++...|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 77 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEE---EGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLI 77 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEecccccc---CCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEE
Confidence 5889999999999999999985 366999998654211 22334566788999999999999999999999999999
Q ss_pred eccccCCHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFFNSLRDRLSTP---PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~---~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||++++|.+++... ..+++.+++.++.||+.||.|||++||+||||||+||+++.++.++|+|||++.....+..
T Consensus 78 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~- 156 (285)
T cd07861 78 FEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR- 156 (285)
T ss_pred EecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc-
Confidence 999999999988643 4589999999999999999999999999999999999999999999999999875432211
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhc--C-
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRG--Q- 253 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~--~- 253 (1553)
......+++.|+|||.+.+ ...++.++|||||||++|+|++|.+||....... .... .
T Consensus 157 ------~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~ 221 (285)
T cd07861 157 ------VYTHEVVTLWYRAPEVLLG---------SPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTP 221 (285)
T ss_pred ------cccCCcccccccChHHhcC---------CCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 1122345788999997642 2346789999999999999999999996442211 0000 0
Q ss_pred -----------------CC-----CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 -----------------YD-----PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 -----------------~~-----~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.. .........+++++++|.+||+.||++|||+.++++|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~ 282 (285)
T cd07861 222 TEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNH 282 (285)
T ss_pred ChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 00 0000112246788999999999999999999999988
No 130
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-34 Score=327.09 Aligned_cols=255 Identities=20% Similarity=0.247 Sum_probs=206.9
Q ss_pred ccccCCCccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEE
Q 000410 17 YLHDLPSSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQ 94 (1553)
Q Consensus 17 ~~~~l~~~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~ 94 (1553)
|+.+-|+. .|.-++.||.|+||-||.|++.. ..||||.+...+. ...+. ...+.+|+..|+++.|||++.|.++|
T Consensus 19 F~k~DPEk-lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGK-Qs~EK-WqDIlKEVrFL~~l~HPntieYkgCy 95 (948)
T KOG0577|consen 19 FFKDDPEK-LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK-QSNEK-WQDILKEVRFLRQLRHPNTIEYKGCY 95 (948)
T ss_pred HccCCHHH-HHHHHHHhcCCccceeEEeeccCccceeeeeecccccc-ccHHH-HHHHHHHHHHHHhccCCCccccccee
Confidence 44444543 47778899999999999999854 6799999865432 23333 45677888999999999999999999
Q ss_pred EeCCEEEEEeccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccc
Q 000410 95 ETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKP 173 (1553)
Q Consensus 95 ~~~~~~~lV~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~ 173 (1553)
..+...|||||||-|+-.|++.- +.++.+.++..|+.+.+.||.|||+++.||||||..|||+++.|.|||+|||++..
T Consensus 96 Lre~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi 175 (948)
T KOG0577|consen 96 LREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASI 175 (948)
T ss_pred eccchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhh
Confidence 99999999999999987777742 34599999999999999999999999999999999999999999999999998865
Q ss_pred ccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCC-CCchHHHHHHhc
Q 000410 174 TYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF-FELSHLLAYRRG 252 (1553)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p-f~~~~~~~~~~~ 252 (1553)
. .| ..+..|||+|||||++.. ...+.|+-++||||||+++.||.-.+|| |+..-+..+...
T Consensus 176 ~-----~P------AnsFvGTPywMAPEVILA-------MDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHI 237 (948)
T KOG0577|consen 176 M-----AP------ANSFVGTPYWMAPEVILA-------MDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHI 237 (948)
T ss_pred c-----Cc------hhcccCCccccchhHhee-------ccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHH
Confidence 4 11 235679999999999973 3467899999999999999999998555 665554443333
Q ss_pred CCCCCCCC-CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 QYDPSQHL-EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ~~~~~~~~-~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+..+.+ ....+..+++||..||++-|.+|||++++|+|
T Consensus 238 AQNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 238 AQNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred HhcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 23322323 33446789999999999999999999999998
No 131
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.5e-32 Score=317.52 Aligned_cols=249 Identities=15% Similarity=0.085 Sum_probs=195.4
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-----CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-----~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~ 100 (1553)
+|++.+.||+|+||.||+|.+. +..||+|++.... .......+.+|..+++.++||||+++++++..+...
T Consensus 6 ~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 81 (266)
T cd05064 6 SIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGC----SDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTM 81 (266)
T ss_pred HeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCC----CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCc
Confidence 7999999999999999999764 2469999986542 123345677888999999999999999999999999
Q ss_pred EEEecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 101 YLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
|+||||++ |+|.+++... ..+++.++..++.||+.||+|||++|++||||||+|||++.++.++|+|||.+......
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~- 160 (266)
T cd05064 82 MIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE- 160 (266)
T ss_pred EEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccccc-
Confidence 99999999 5899998764 46899999999999999999999999999999999999999999999999976542110
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhc-CCCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRG-QYDP 256 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~-~~~~ 256 (1553)
.........++..|+|||.+. ...++.++||||+||++||+++ |.+||........... ....
T Consensus 161 -----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~ 225 (266)
T cd05064 161 -----AIYTTMSGKSPVLWAAPEAIQ----------YHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGF 225 (266)
T ss_pred -----chhcccCCCCceeecCHHHHh----------hCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC
Confidence 000111223456799999764 3467889999999999999875 8888864332222111 1111
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
....+...+..+.+++.+||+.+|++||+++++++.+.
T Consensus 226 ~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~ 263 (266)
T cd05064 226 RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILS 263 (266)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHH
Confidence 11234445678999999999999999999999998754
No 132
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.6e-34 Score=307.69 Aligned_cols=248 Identities=19% Similarity=0.236 Sum_probs=205.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+++.||+|.||+|.+|+.+. +.+|+|++.|.-.. ..++. ..-..|.++|+...||.+..+.-.|++.+.+|+|
T Consensus 169 dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKevii-akdEV-AHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 169 DFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVII-AKDEV-AHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred hhhHHHHhcCCccceEEEEeecccCceeehhhhhhhhee-ehHHh-hhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 67889999999999999998864 67999999876221 22222 2334566899999999999888889999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+. |.|+-.++....+++...+.+...|+.||.|||+++||.||||.+|.|++.+|++||+|||+++.-..
T Consensus 247 MeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~------ 320 (516)
T KOG0690|consen 247 MEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK------ 320 (516)
T ss_pred EEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhccc------
Confidence 99999 59999998888899999999999999999999999999999999999999999999999999985422
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK 262 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~ 262 (1553)
+.....+.+|||.|+|||++. ...|+.++|.|.+|+++|||++|+.||...+-.++..-+......++.
T Consensus 321 -~g~t~kTFCGTPEYLAPEVle----------DnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr 389 (516)
T KOG0690|consen 321 -YGDTTKTFCGTPEYLAPEVLE----------DNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR 389 (516)
T ss_pred -ccceeccccCChhhcCchhhc----------cccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc
Confidence 223456789999999999764 567899999999999999999999998665544433333333334666
Q ss_pred CCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 263 IPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
..+++.+.|+..+|.+||.+|. .|.|+.+|
T Consensus 390 ~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h 424 (516)
T KOG0690|consen 390 TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRH 424 (516)
T ss_pred cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhh
Confidence 6778999999999999999998 45667666
No 133
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.8e-34 Score=306.28 Aligned_cols=252 Identities=21% Similarity=0.250 Sum_probs=206.3
Q ss_pred EEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCCEEEEEecc
Q 000410 30 KEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKAAYLLRQY 106 (1553)
Q Consensus 30 ~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~~~~lV~E~ 106 (1553)
.+.||+|+|+.|--|..- +..||||++.|.. .....++.+|++++.+++ |+||++++++|+++..+|||||-
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~-----gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~FYLVfEK 157 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQP-----GHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTRFYLVFEK 157 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCC-----chHHHHHHHHHHHHHHhcCCccHHHHHHHhcccceEEEEEec
Confidence 468999999999988763 4569999998762 234567888999999985 99999999999999999999999
Q ss_pred cc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCc---EEEeecCccccccCCCCCCC
Q 000410 107 FF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNW---LYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 107 ~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~---vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+. |.|..+|.++..+++.++..+.++|+.||.+||.+||.|||+||||||..+.+. ||||||.+........+-..
T Consensus 158 m~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~sp 237 (463)
T KOG0607|consen 158 MRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSP 237 (463)
T ss_pred ccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCC
Confidence 99 699999999999999999999999999999999999999999999999987664 89999977654433322222
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch------------------
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS------------------ 244 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~------------------ 244 (1553)
....-..+.+|+..|||||+..-- +.....|++++|.||||+|+|-|+.|.|||.+.
T Consensus 238 astP~L~tPvGSAEfMAPEVVd~f-----v~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~ 312 (463)
T KOG0607|consen 238 ASTPELLTPVGSAEFMAPEVVDVF-----VDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQN 312 (463)
T ss_pred CCCccccCcccchhhcchhHHhhh-----ccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHH
Confidence 222334567889999999987432 233457999999999999999999999999421
Q ss_pred -HHHHHHhcCCCCCC-CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 245 -HLLAYRRGQYDPSQ-HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 245 -~~~~~~~~~~~~~~-~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
-...+..|.|..+. .|..+ +.+.+++|..+|..|+..|.++.++++|
T Consensus 313 ~LFesIQEGkYeFPdkdWahI-S~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 313 KLFESIQEGKYEFPDKDWAHI-SSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred HHHHHHhccCCcCChhhhHHh-hHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 13446778887444 44444 5689999999999999999999999997
No 134
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=3e-32 Score=321.26 Aligned_cols=254 Identities=17% Similarity=0.167 Sum_probs=199.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+|.+.+.||+|+||.||+|++.+ ..+++|.+... .....+.+.+|+++++.++||||+++++++....
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 80 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDP-----TLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD 80 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCc-----cHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC
Confidence 78999999999999999998532 34888887432 1233456778889999999999999999999999
Q ss_pred EEEEEecccc-CCHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 161 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~ 161 (1553)
..++||||++ ++|.+++... +.+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus 81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANL 160 (291)
T ss_pred ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCC
Confidence 9999999998 6999998643 2378999999999999999999999999999999999999999
Q ss_pred cEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCC
Q 000410 162 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPF 240 (1553)
Q Consensus 162 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~p 240 (1553)
.++|+|||+++...... .........++..|+|||.+. ...++.++|||||||++|||++ |.+|
T Consensus 161 ~~~l~dfg~a~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~el~t~g~~p 225 (291)
T cd05094 161 LVKIGDFGMSRDVYSTD-----YYRVGGHTMLPIRWMPPESIM----------YRKFTTESDVWSFGVILWEIFTYGKQP 225 (291)
T ss_pred cEEECCCCcccccCCCc-----eeecCCCCCcceeecChHHhc----------cCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 99999999987543221 111112334567899999764 3457889999999999999998 8888
Q ss_pred CCchHHHHHHhc-CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhcccCC
Q 000410 241 FELSHLLAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFP 299 (1553)
Q Consensus 241 f~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fP 299 (1553)
|........... ........+...+..+.+++.+||+.||++||++.++++.+.....+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 226 WFQLSNTEVIECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred CCCCCHHHHHHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 854333222211 11111223344567899999999999999999999999998755433
No 135
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=5.1e-33 Score=321.42 Aligned_cols=247 Identities=28% Similarity=0.282 Sum_probs=197.9
Q ss_pred eEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|++.+.||+|+||+||++++.+ +.||+|++.... ..........+|..+++.++||||+++++++......++||
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~ 77 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSE---IEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVM 77 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTT---HHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEecccc---ccccccchhhhhhhccccccccccccccccccccccccccc
Confidence 7899999999999999999976 369999997762 11222223345788999999999999999999999999999
Q ss_pred ccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCC
Q 000410 105 QYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSD 183 (1553)
Q Consensus 105 E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~ 183 (1553)
||+.+ +|.+++...+.+++.++..++.||+.||.+||++||+||||||+||+++.++.++|+|||.+.... .
T Consensus 78 ~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~-------~ 150 (260)
T PF00069_consen 78 EYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLS-------E 150 (260)
T ss_dssp EEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEEST-------S
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-------c
Confidence 99997 999999866779999999999999999999999999999999999999999999999999987531 1
Q ss_pred cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch----HHHHHHhcCCC---C
Q 000410 184 FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS----HLLAYRRGQYD---P 256 (1553)
Q Consensus 184 ~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~----~~~~~~~~~~~---~ 256 (1553)
.........++..|+|||.+. ....++.++|||||||++|+|++|..||... ....+.+.... .
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~---------~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 221 (260)
T PF00069_consen 151 NNENFNPFVGTPEYMAPEVLQ---------QGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPS 221 (260)
T ss_dssp TTSEBSSSSSSGGGSCHHHHT---------TTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHH
T ss_pred ccccccccccccccccccccc---------ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccc
Confidence 112334456788999999763 1456789999999999999999998888754 22222211111 0
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.........+.+.++|.+||+.||++||++.++++|
T Consensus 222 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~ 257 (260)
T PF00069_consen 222 SSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKH 257 (260)
T ss_dssp HTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTS
T ss_pred cccccchhHHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 000111112689999999999999999999999998
No 136
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=2.6e-32 Score=327.96 Aligned_cols=254 Identities=16% Similarity=0.197 Sum_probs=197.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++++.+ ..+|+|++.+.. .........+.+|..++..++||||++++++++++...|+|
T Consensus 2 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (332)
T cd05623 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE--MLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLV 79 (332)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHH--HHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEE
Confidence 68999999999999999999865 569999986531 11122334577788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||+. |+|.+++.+ ...+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~--- 156 (332)
T cd05623 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--- 156 (332)
T ss_pred EeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCC---
Confidence 99998 699999976 4568999999999999999999999999999999999999999999999999886542111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH-H---hcCCC-C
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY-R---RGQYD-P 256 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~-~---~~~~~-~ 256 (1553)
........|++.|+|||++.... .....++.++|||||||++|||++|++||........ . ..... .
T Consensus 157 ---~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~ 228 (332)
T cd05623 157 ---TVQSSVAVGTPDYISPEILQAME-----DGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQ 228 (332)
T ss_pred ---cceecccccCccccCHHHHhccc-----cCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCcccc
Confidence 11122346889999999875321 1234678899999999999999999999975543222 1 11111 1
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 292 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 292 (1553)
.+......++.+++||.+||..+|.+ |++++++++|
T Consensus 229 ~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 229 FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 11112234678999999999765554 6899999998
No 137
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.2e-32 Score=332.49 Aligned_cols=248 Identities=21% Similarity=0.227 Sum_probs=193.0
Q ss_pred cCCCccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC
Q 000410 20 DLPSSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD 97 (1553)
Q Consensus 20 ~l~~~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~ 97 (1553)
++++ +|++.+.||+|+||.||+|.+.. +.||||++.+.. ......+.+.+|+.+++.++||||+++++++...
T Consensus 12 ~~~~--~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 86 (343)
T cd07878 12 EVPE--RYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF---QSLIHARRTYRELRLLKHMKHENVIGLLDVFTPA 86 (343)
T ss_pred hhhh--hhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh---hhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccc
Confidence 3454 68899999999999999998753 569999986541 1122344566788999999999999999887543
Q ss_pred ------CEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcc
Q 000410 98 ------KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASF 171 (1553)
Q Consensus 98 ------~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a 171 (1553)
...|++++++.++|.+++... .+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~l~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~ 165 (343)
T cd07878 87 TSIENFNEVYLVTNLMGADLNNIVKCQ-KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLA 165 (343)
T ss_pred ccccccCcEEEEeecCCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccc
Confidence 457999999999999888654 4999999999999999999999999999999999999999999999999998
Q ss_pred ccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH---
Q 000410 172 KPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA--- 248 (1553)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~--- 248 (1553)
+..... .....+++.|+|||.+.+ ...++.++|||||||++|+|++|.+||...+...
T Consensus 166 ~~~~~~----------~~~~~~t~~y~aPE~~~~---------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~ 226 (343)
T cd07878 166 RQADDE----------MTGYVATRWYRAPEIMLN---------WMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLK 226 (343)
T ss_pred eecCCC----------cCCccccccccCchHhcC---------CccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHH
Confidence 754211 122356888999998742 2357889999999999999999999996433211
Q ss_pred -HHhcCCC------------------------CCCC---CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 -YRRGQYD------------------------PSQH---LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 -~~~~~~~------------------------~~~~---~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+...... +... .....++.+.+||.+||+.||++|||+.|+|+|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 227 RIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred HHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1100000 0000 001234568899999999999999999999998
No 138
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=8.6e-33 Score=307.79 Aligned_cols=257 Identities=18% Similarity=0.208 Sum_probs=227.6
Q ss_pred CCCCcc-cCccEeeeccccccCeeEEEEcCC--CCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEec
Q 000410 1121 PDSGWR-PRGILVAHLQEHCSAVNEIAISHD--HSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLR 1197 (1553)
Q Consensus 1121 ~~~~W~-p~G~lv~~l~~H~~~V~~l~~spd--~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~ 1197 (1553)
..+.|. |++.++.+|.||.+.|.++.|+|. +.-+||||.||+||+|++++-. ....+.+|..+|..++|+|
T Consensus 198 ~~kvW~~~~~~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~------~l~~l~gH~~RVs~VafHP 271 (459)
T KOG0272|consen 198 LVKVWSVPQCNLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQET------PLQDLEGHLARVSRVAFHP 271 (459)
T ss_pred ceeEeecCCcceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCc------chhhhhcchhhheeeeecC
Confidence 356898 889999999999999999999997 5689999999999999998643 5667889999999999999
Q ss_pred CCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCC
Q 000410 1198 HSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRS 1277 (1553)
Q Consensus 1198 ~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt 1277 (1553)
+|+.|+|++.|.+-++||+.+. .......+|...|.+++|+++ |.++++|+.|..=++||+|+
T Consensus 272 sG~~L~TasfD~tWRlWD~~tk--------------~ElL~QEGHs~~v~~iaf~~D---GSL~~tGGlD~~~RvWDlRt 334 (459)
T KOG0272|consen 272 SGKFLGTASFDSTWRLWDLETK--------------SELLLQEGHSKGVFSIAFQPD---GSLAATGGLDSLGRVWDLRT 334 (459)
T ss_pred CCceeeecccccchhhcccccc--------------hhhHhhcccccccceeEecCC---CceeeccCccchhheeeccc
Confidence 9999999999999999999841 223345578889999999999 77999999999999999999
Q ss_pred CcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCE
Q 000410 1278 NSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPL 1357 (1553)
Q Consensus 1278 ~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~ 1357 (1553)
|+++..|.+ |...|.++.|+|+|..|++|+.|++++|||+|-..++..+.. |..-|..+++ .|. .|.+
T Consensus 335 gr~im~L~g--H~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipA-H~nlVS~Vk~-~p~--------~g~f 402 (459)
T KOG0272|consen 335 GRCIMFLAG--HIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPA-HSNLVSQVKY-SPQ--------EGYF 402 (459)
T ss_pred CcEEEEecc--cccceeeEeECCCceEEeecCCCCcEEEeeecccccceeccc-ccchhhheEe-ccc--------CCeE
Confidence 999999977 999999999999999999999999999999999888777665 6667888888 663 3679
Q ss_pred EEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEE
Q 000410 1358 IYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRS 1437 (1553)
Q Consensus 1358 l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~s 1437 (1553)
+++++.|++++||.-.+++|.+.+.++ ...|.+
T Consensus 403 L~TasyD~t~kiWs~~~~~~~ksLaGH-----------------------------------------------e~kV~s 435 (459)
T KOG0272|consen 403 LVTASYDNTVKIWSTRTWSPLKSLAGH-----------------------------------------------EGKVIS 435 (459)
T ss_pred EEEcccCcceeeecCCCcccchhhcCC-----------------------------------------------ccceEE
Confidence 999999999999999999988777643 337899
Q ss_pred eccCCCC-eEEEccCCCeEEEEe
Q 000410 1438 LLPLPGG-DLLTGGTDLKIRRWD 1459 (1553)
Q Consensus 1438 l~~sp~g-~llTgg~Dg~IrlWD 1459 (1553)
+..++++ .++|++.|++|++|.
T Consensus 436 ~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 436 LDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred EEeccCCceEEEeccCceeeecc
Confidence 9999999 788999999999995
No 139
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=4.8e-32 Score=319.33 Aligned_cols=245 Identities=20% Similarity=0.244 Sum_probs=202.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++.+.+ ..+|+|++.+.. .........+.+|+++++.++||||+++++++..++..|+|
T Consensus 2 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 79 (290)
T cd05580 2 DFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAK--IVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLV 79 (290)
T ss_pred ceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHH--hhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEE
Confidence 68999999999999999999864 679999986541 11223445678888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+. ++|.+++.....+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 80 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~----- 154 (290)
T cd05580 80 MEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR----- 154 (290)
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-----
Confidence 99996 799999988888999999999999999999999999999999999999999999999999998754221
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK 262 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~ 262 (1553)
.....+++.|+|||.+. ....+.++||||||+++|+|++|.+||..................++.
T Consensus 155 -----~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 219 (290)
T cd05580 155 -----TYTLCGTPEYLAPEIIL----------SKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS 219 (290)
T ss_pred -----CCCCCCCccccChhhhc----------CCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCc
Confidence 12234678899999764 235678999999999999999999999655433222211122223444
Q ss_pred CCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 263 IPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
..+..++++|.+||..||.+|+ +++|+++|
T Consensus 220 ~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~ 254 (290)
T cd05580 220 FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNH 254 (290)
T ss_pred cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcC
Confidence 5578999999999999999999 89999987
No 140
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-32 Score=332.74 Aligned_cols=239 Identities=18% Similarity=0.216 Sum_probs=187.2
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
.+|++.+.||+|+||.||+|++.+ ..||+|+..+.. ...|..+++.++||||+++++++......|+
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~~-----------~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 134 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKGT-----------TLIEAMLLQNVNHPSVIRMKDTLVSGAITCM 134 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCccc-----------cHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence 469999999999999999999865 569999853321 1346678999999999999999999999999
Q ss_pred EeccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||+.++|.+++.. ...+++.++..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++..... +
T Consensus 135 v~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~---~ 211 (357)
T PHA03209 135 VLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA---P 211 (357)
T ss_pred EEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccC---c
Confidence 999999999999865 356899999999999999999999999999999999999999999999999988643111 1
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC-CCCCCch-------------HHH
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELS-------------HLL 247 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~pf~~~-------------~~~ 247 (1553)
......|++.|+|||++. +..++.++|||||||++|||+++ .++|... .+.
T Consensus 212 -----~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~ 276 (357)
T PHA03209 212 -----AFLGLAGTVETNAPEVLA----------RDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLL 276 (357)
T ss_pred -----ccccccccccccCCeecC----------CCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHH
Confidence 112345788999999764 34678899999999999999986 6665421 111
Q ss_pred HHHhc-CCCCCCC----------------------------C-CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 248 AYRRG-QYDPSQH----------------------------L-EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 248 ~~~~~-~~~~~~~----------------------------~-~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+... ...+... + ....+..+.+||.+||+.||++||||+|+|+|
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~h 351 (357)
T PHA03209 277 KIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNY 351 (357)
T ss_pred HHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcC
Confidence 11110 0000000 0 01223467789999999999999999999998
No 141
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=2e-32 Score=320.62 Aligned_cols=247 Identities=17% Similarity=0.174 Sum_probs=197.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+|.+.+.||+|+||.||+|.+.+ ..||+|++.... ..+..+.+.+|+++++.+.||||+++++++....
T Consensus 6 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 81 (280)
T cd05049 6 TIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETA----SNDARKDFEREAELLTNFQHENIVKFYGVCTEGD 81 (280)
T ss_pred HhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccC----CHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC
Confidence 68889999999999999998642 469999986542 2334567888899999999999999999999999
Q ss_pred EEEEEecccc-CCHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcE
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP--------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWL 163 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~--------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~v 163 (1553)
..|+||||++ ++|.+++... ..+++.++..++.|++.||.|||++|++||||||+||+++.++.+
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 82 PPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred CeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeE
Confidence 9999999999 6999998653 247889999999999999999999999999999999999999999
Q ss_pred EEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCC
Q 000410 164 YLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFE 242 (1553)
Q Consensus 164 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~ 242 (1553)
+|+|||+++....... ........+++.|+|||.+. ...+++++|||||||++|||++ |..||.
T Consensus 162 kl~d~g~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~e~~~~g~~p~~ 226 (280)
T cd05049 162 KIGDFGMSRDVYTTDY-----YRVGGHTMLPIRWMPPESIM----------YRKFTTESDVWSFGVVLWEIFTYGKQPWY 226 (280)
T ss_pred EECCcccceecccCcc-----eecCCCCcccceecChhhhc----------cCCcchhhhHHHHHHHHHHHHhcCCCCCC
Confidence 9999999875422110 01112223467899999764 3467889999999999999998 888875
Q ss_pred chHHHH----HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 243 LSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 243 ~~~~~~----~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
...... +..+.. ...+...+..+++++.+||+.||++||+++|+++.+.
T Consensus 227 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 227 GLSNEEVIECITQGRL---LQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred CCCHHHHHHHHHcCCc---CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 433222 222222 1223345678999999999999999999999998764
No 142
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=4.5e-32 Score=319.20 Aligned_cols=247 Identities=18% Similarity=0.192 Sum_probs=197.1
Q ss_pred cceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD 97 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~ 97 (1553)
.+|++.+.||+|+||+||++.+.. ..+++|.+... .......+.+|+++++.++||||+++++++...
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA-----SDNARKDFHREAELLTNLQHEHIVKFYGVCVEG 79 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc-----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence 479999999999999999998521 34888887543 133455678888999999999999999999999
Q ss_pred CEEEEEecccc-CCHHHHhcCCC-------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcE
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTPP-------------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWL 163 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~~-------------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~v 163 (1553)
...|+||||++ ++|.+++...+ .+++.++..++.||+.||+|||++|++||||||+|||+++++.+
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~ 159 (288)
T cd05093 80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV 159 (288)
T ss_pred CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcE
Confidence 99999999999 69999986432 48999999999999999999999999999999999999999999
Q ss_pred EEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCC
Q 000410 164 YLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFE 242 (1553)
Q Consensus 164 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~ 242 (1553)
+|+|||.++...... .........++..|+|||.+. ...++.++|||||||++|+|++ |.+||.
T Consensus 160 kl~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~sDiwslG~il~~l~t~g~~p~~ 224 (288)
T cd05093 160 KIGDFGMSRDVYSTD-----YYRVGGHTMLPIRWMPPESIM----------YRKFTTESDVWSLGVVLWEIFTYGKQPWY 224 (288)
T ss_pred EeccCCccccccCCc-----eeecCCCCCccccccCHHHhc----------cCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 999999987542211 111112233467799999764 3457889999999999999998 888986
Q ss_pred chHHHH----HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 243 LSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 243 ~~~~~~----~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
...... +..+.. ...+...+..+.+++.+||+.||.+|||+.++++.+.
T Consensus 225 ~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~ 277 (288)
T cd05093 225 QLSNNEVIECITQGRV---LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQ 277 (288)
T ss_pred CCCHHHHHHHHHcCCc---CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHH
Confidence 543322 222222 1233445678999999999999999999999987765
No 143
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=4.7e-32 Score=323.50 Aligned_cols=251 Identities=14% Similarity=0.120 Sum_probs=197.5
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--c----eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--G----LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~----~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
.+|++.+.||+|+||.||+|.+.. . .||+|++... ......+++.+|+.+++.++||||+++++++..+
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~- 81 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA----TSPKANKEILDEAYVMASVDNPHVCRLLGICLTS- 81 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc----CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-
Confidence 379999999999999999998632 2 3888988533 2234456677888999999999999999998765
Q ss_pred EEEEEecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccC
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~ 176 (1553)
..++++||+. |+|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 82 ~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 82 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccC
Confidence 4678999998 7999999764 4588999999999999999999999999999999999999999999999999986532
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH---HHhc
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA---YRRG 252 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~---~~~~ 252 (1553)
... .........+..|+|||.+. ...++.++|||||||++|||++ |.+||....... ....
T Consensus 162 ~~~-----~~~~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~~~~~ 226 (316)
T cd05108 162 DEK-----EYHAEGGKVPIKWMALESIL----------HRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEK 226 (316)
T ss_pred CCc-----ceeccCCccceeecChHHhc----------cCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhC
Confidence 211 11112233456799999764 3467889999999999999997 899997544332 2222
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhccc
Q 000410 253 QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVV 297 (1553)
Q Consensus 253 ~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~ 297 (1553)
... ...+...+..+.+++.+||+.||++||++.+++.++....
T Consensus 227 ~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~ 269 (316)
T cd05108 227 GER--LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMA 269 (316)
T ss_pred CCC--CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 211 1223445678999999999999999999999999876443
No 144
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=3.7e-32 Score=348.92 Aligned_cols=248 Identities=19% Similarity=0.213 Sum_probs=193.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe--CCEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET--DKAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~--~~~~~ 101 (1553)
+|++.+.||.|+||.||+|++.. ..+|+|++..... .......+..|+.+++.++||||++++++|.. ...+|
T Consensus 14 ~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l---~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ly 90 (1021)
T PTZ00266 14 EYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGL---KEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLY 90 (1021)
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEecccc---CHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEE
Confidence 79999999999999999999865 5689999865421 23345667889999999999999999998854 46799
Q ss_pred EEecccc-CCHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHC-------CCeecCCCCCcEEEecC---------
Q 000410 102 LLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEK-------GICHGDIKCENVLVTSW--------- 160 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~-------gIvHrDIKp~NILv~~~--------- 160 (1553)
|||||++ |+|.++|.. ...+++..++.|+.||+.||.|||+. +|+||||||+||||+..
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 9999999 699998864 24699999999999999999999995 49999999999999642
Q ss_pred --------CcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHH
Q 000410 161 --------NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIA 232 (1553)
Q Consensus 161 --------~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~ 232 (1553)
+.+||+|||++....... ......|++.|+|||++.. ....++.++|||||||+||
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~s--------~~~s~vGTp~YmAPEvL~g--------e~~~~s~KSDVWSLG~ILY 234 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIES--------MAHSCVGTPYYWSPELLLH--------ETKSYDDKSDMWALGCIIY 234 (1021)
T ss_pred cccccCCCCceEEccCCccccccccc--------cccccCCCccccCHHHHhc--------cCCCCCchhHHHHHHHHHH
Confidence 348999999987542111 1123467999999998752 1335788999999999999
Q ss_pred HHHcCCCCCCchH-HHHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 233 ELFLEVPFFELSH-LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 233 eLltg~~pf~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
||++|.+||.... ...+...............+..+.+||..||..+|.+||++.|+|.+
T Consensus 235 ELLTGk~PF~~~~~~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 235 ELCSGKTPFHKANNFSQLISELKRGPDLPIKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred HHHHCCCCCCcCCcHHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 9999999996432 22221111111111112345789999999999999999999999986
No 145
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=8.3e-32 Score=313.00 Aligned_cols=256 Identities=17% Similarity=0.159 Sum_probs=203.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcC----HHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYID----LREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~----~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~ 99 (1553)
+|.+.+.||.|+||.||+|.+.. ..+|+|.+........ .....+.+.+|+.+++.++||||+++++++.....
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 36788999999999999998753 6799999876532221 23344678889999999999999999999999999
Q ss_pred EEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
.+++|||++ ++|.+++...+.+++..+..++.|++.||+|||++|++||||||+||++++++.++|+|||.++......
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANS 160 (267)
T ss_pred cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence 999999998 5999999887779999999999999999999999999999999999999999999999999987653211
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHHhcCCCCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRRGQYDPS 257 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~~~~~~~ 257 (1553)
.... .........++..|+|||.+. +..++.++|+||+||++|+|++|..||.... ...+........
T Consensus 161 ~~~~-~~~~~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 229 (267)
T cd06628 161 LSTK-TNGARPSLQGSVFWMAPEVVK----------QTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENAS 229 (267)
T ss_pred ccCC-ccccccccCCCcCccChhHhc----------cCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccCC
Confidence 1110 111112234677899999764 3356788999999999999999999996533 222222111222
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+..+...+..+.++|.+||+.||.+||++.++++|
T Consensus 230 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 264 (267)
T cd06628 230 PEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKH 264 (267)
T ss_pred CcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhC
Confidence 23444556789999999999999999999999987
No 146
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-33 Score=279.99 Aligned_cols=254 Identities=21% Similarity=0.292 Sum_probs=202.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|...++||+|.||+||+|+..+ +.||+|.+...++... ......+|+-+|+.++|.||++++++...++.+-+|
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddeg---vpssalreicllkelkhknivrl~dvlhsdkkltlv 79 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEG---VPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLV 79 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCC---CcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEe
Confidence 46667899999999999999876 5699999876633222 122334666799999999999999999999999999
Q ss_pred eccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+|||..+|..+... ++.+..+.++.++.|+++||.+||++++.|||+||.|.||+.+|.+||+|||+++...+|..
T Consensus 80 fe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvr--- 156 (292)
T KOG0662|consen 80 FEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVR--- 156 (292)
T ss_pred HHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceE---
Confidence 99999999999865 67799999999999999999999999999999999999999999999999999998766543
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH----HHhcC-CCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA----YRRGQ-YDP 256 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~----~~~~~-~~~ 256 (1553)
.+.....|.+|++|.++.+. .-|+...|+||.|||++|+.. |+|.|.+.+... +.+.. ...
T Consensus 157 ----cysaevvtlwyrppdvlfga---------kly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ 223 (292)
T KOG0662|consen 157 ----CYSAEVVTLWYRPPDVLFGA---------KLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT 223 (292)
T ss_pred ----eeeceeeeeeccCcceeeee---------ehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCc
Confidence 23344568999999998743 358889999999999999986 699998665432 21110 000
Q ss_pred CCCCCCC------------------------CCHHHHHHHHHhcccCcCCCCCHHHHHHhhhcccCCCCCCch
Q 000410 257 SQHLEKI------------------------PDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSPF 305 (1553)
Q Consensus 257 ~~~~~~~------------------------~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fP~~f~~f 305 (1553)
...++.+ .+..-++|+.++|.-+|..|.+|+++++| +||.+|
T Consensus 224 ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalqh-------pyf~d~ 289 (292)
T KOG0662|consen 224 EDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQH-------PYFSDF 289 (292)
T ss_pred cccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhcC-------cccccc
Confidence 1111110 12356899999999999999999999998 677654
No 147
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=6.3e-32 Score=311.83 Aligned_cols=243 Identities=23% Similarity=0.282 Sum_probs=197.8
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||++.+. ++.+|+|.+.... .....+.+.+|..+++.++||||+++++.+++++..|++
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 76 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPK----SSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIV 76 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCc----chHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEE
Confidence 4789999999999999999885 3679999986542 123345667788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||++ ++|.+++.. ...+++..+..++.||+.||.|||++||+|+||||+||++++++.++|+|||.+.....+.
T Consensus 77 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~-- 154 (255)
T cd08219 77 MEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG-- 154 (255)
T ss_pred EeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccc--
Confidence 99998 699998864 2358899999999999999999999999999999999999999999999999886542211
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----HhcCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQYDP 256 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~~~~ 256 (1553)
.......+++.|+|||++. ...++.++|+||+||++|+|++|.+||...+.... ..+...
T Consensus 155 -----~~~~~~~~~~~~~aPE~~~----------~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~- 218 (255)
T cd08219 155 -----AYACTYVGTPYYVPPEIWE----------NMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYK- 218 (255)
T ss_pred -----cccccccCCccccCHHHHc----------cCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCC-
Confidence 1112335678899999764 34578899999999999999999999976554332 222222
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+...+..++++|.+||+.||++||++.+++..
T Consensus 219 --~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 --PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred --CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 2334456789999999999999999999999975
No 148
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=2.5e-32 Score=326.02 Aligned_cols=243 Identities=23% Similarity=0.293 Sum_probs=183.7
Q ss_pred EEEeeccCcEEEEEEEECC----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE--eCCEEEEE
Q 000410 30 KEVLGGSRFFKSILCKHDE----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQE--TDKAAYLL 103 (1553)
Q Consensus 30 ~~~LG~G~fg~V~~a~~~~----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~--~~~~~~lV 103 (1553)
..+||+|+||.||+|++.+ ..||+|.+.... ....+.+|..+++.++||||+++++++. .+...|+|
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv 78 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-------ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLL 78 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC-------CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEE
Confidence 4689999999999999753 469999885431 1224567889999999999999999884 45678999
Q ss_pred eccccCCHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEE----ecCCcEEEeecCc
Q 000410 104 RQYFFNSLRDRLST---------PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV----TSWNWLYLSDFAS 170 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~---------~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv----~~~~~vkL~DFG~ 170 (1553)
|||++++|.+++.. ...+++..++.++.||+.||.|||++||+||||||+|||+ +.++.+||+|||+
T Consensus 79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 79 FDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred EeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 99999999888742 1248899999999999999999999999999999999999 4567899999999
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL---- 246 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~---- 246 (1553)
++....+..... ......+++.|+|||.+.+ ...++.++||||+||++|||++|.+||...+.
T Consensus 159 a~~~~~~~~~~~----~~~~~~~t~~y~aPE~~~~---------~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~ 225 (317)
T cd07867 159 ARLFNSPLKPLA----DLDPVVVTFWYRAPELLLG---------ARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKT 225 (317)
T ss_pred eeccCCCccccc----ccCcceecccccCcHHhcC---------CCccCcHHHHHhHHHHHHHHHhCCCCcccccccccc
Confidence 976532221111 1223456888999998742 23578899999999999999999999863211
Q ss_pred ---------HHHHh----------------------------cCCCCC------CCCCCCCCHHHHHHHHHhcccCcCCC
Q 000410 247 ---------LAYRR----------------------------GQYDPS------QHLEKIPDSGIRKMILHMIQLEPELR 283 (1553)
Q Consensus 247 ---------~~~~~----------------------------~~~~~~------~~~~~~~~~~l~~LI~~mL~~dP~~R 283 (1553)
..+.. ..+... .......+..+.+||.+||+.||.+|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R 305 (317)
T cd07867 226 SNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKR 305 (317)
T ss_pred cccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccc
Confidence 00000 000000 00011234568899999999999999
Q ss_pred CCHHHHHHh
Q 000410 284 FSAESYLQN 292 (1553)
Q Consensus 284 psa~elL~~ 292 (1553)
||++|+|+|
T Consensus 306 ~t~~e~l~h 314 (317)
T cd07867 306 ITSEQALQD 314 (317)
T ss_pred cCHHHHhcC
Confidence 999999998
No 149
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=7.9e-32 Score=310.89 Aligned_cols=247 Identities=17% Similarity=0.140 Sum_probs=199.7
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+.+.||+|+||.||+|.+. +..|++|.+..... . ......+..|.++++.++||||+++++++.+++..|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 77 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKM--N-RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIV 77 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhC--C-HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEE
Confidence 4788999999999999999885 36799999865421 1 33445677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||++ ++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++......
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~-- 155 (256)
T cd08529 78 MEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT-- 155 (256)
T ss_pred EEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCcc--
Confidence 99998 5999998663 468999999999999999999999999999999999999999999999999887553211
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhc-CCCCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRG-QYDPSQH 259 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~-~~~~~~~ 259 (1553)
.......+++.|+|||.+. ...++.++|+|||||++|+|++|..||........... .....+.
T Consensus 156 -----~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 220 (256)
T cd08529 156 -----NFANTIVGTPYYLSPELCE----------DKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPP 220 (256)
T ss_pred -----chhhccccCccccCHHHhc----------CCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 1122345678899999764 33577899999999999999999999975543322211 1111222
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
++...+..+.++|.+||+.+|++||++.+++++
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 221 VSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 333556789999999999999999999999987
No 150
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=5.3e-32 Score=314.70 Aligned_cols=249 Identities=19% Similarity=0.157 Sum_probs=196.7
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++. +..||+|++..... .....+.+|+.+++.++||||+++++++..+...|+|
T Consensus 10 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-----~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv 84 (267)
T cd06646 10 DYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG-----DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWIC 84 (267)
T ss_pred hcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc-----chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEE
Confidence 7999999999999999999974 35699999864311 1223566788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ ++|.+++..+..+++.++..++.|++.||+|||++||+||||||+||+++.++.++|+|||++.........
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~-- 162 (267)
T cd06646 85 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK-- 162 (267)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccc--
Confidence 99999 599999987778999999999999999999999999999999999999999999999999998754211110
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHH---HhcCCCCC-
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAY---RRGQYDPS- 257 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~---~~~~~~~~- 257 (1553)
.....+++.|+|||.+... ....++.++|+||+||++|||++|.+||.... .... ....+.+.
T Consensus 163 -----~~~~~~~~~y~~PE~~~~~-------~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 230 (267)
T cd06646 163 -----RKSFIGTPYWMAPEVAAVE-------KNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPK 230 (267)
T ss_pred -----cCccccCccccCHhHcccc-------cCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCC
Confidence 1123467789999976421 13356789999999999999999988874322 2111 11111111
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.......+..++++|.+||..||++||+++++++|+
T Consensus 231 ~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 231 LKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 111123457899999999999999999999999884
No 151
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=3.8e-32 Score=326.24 Aligned_cols=253 Identities=17% Similarity=0.203 Sum_probs=197.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++++.. +.||+|++.+.. .........+.+|..++..++||||+++++++++++..|+|
T Consensus 2 ~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv 79 (331)
T cd05624 2 DFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWE--MLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLV 79 (331)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHH--HHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 68999999999999999999864 569999986531 11122344577788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||+. |+|.+++.. +..+++..++.++.|++.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--- 156 (331)
T cd05624 80 MDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG--- 156 (331)
T ss_pred EeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC---
Confidence 99998 699999976 4568999999999999999999999999999999999999999999999999987542211
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----HhcCC--C
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQY--D 255 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~~--~ 255 (1553)
........|++.|+|||++.... .....++.++||||+||++|||++|++||........ ..... .
T Consensus 157 ---~~~~~~~~gt~~y~aPE~~~~~~-----~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~ 228 (331)
T cd05624 157 ---TVQSSVAVGTPDYISPEILQAME-----DGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQ 228 (331)
T ss_pred ---ceeeccccCCcccCCHHHHhccc-----cCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCccc
Confidence 11112345889999999875321 1123578899999999999999999999975443322 11111 1
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCcCC--CCCHHHHHHh
Q 000410 256 PSQHLEKIPDSGIRKMILHMIQLEPEL--RFSAESYLQN 292 (1553)
Q Consensus 256 ~~~~~~~~~~~~l~~LI~~mL~~dP~~--Rpsa~elL~~ 292 (1553)
....+ ...++.++++|.+||..++.+ |++++++++|
T Consensus 229 ~p~~~-~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 229 FPSHI-TDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CCCcc-ccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 11111 123578999999999876654 4689999988
No 152
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=6.3e-32 Score=316.03 Aligned_cols=250 Identities=13% Similarity=0.069 Sum_probs=194.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+|++.+.||+|+||.||+|.+.+ ..||+|++.... .......+.+|..+++.++||||+++++++....
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~----~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 7 KITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAA----SMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred HceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccC----CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 79999999999999999998642 459999875331 1223455778889999999999999999999999
Q ss_pred EEEEEecccc-CCHHHHhcCC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEee
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP----------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSD 167 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~----------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~D 167 (1553)
..++||||++ ++|.+++... ..++...+..++.|++.||.|||++|++||||||+||++++++.++|+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~d 162 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGD 162 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECC
Confidence 9999999999 6999998642 1256788899999999999999999999999999999999999999999
Q ss_pred cCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHH
Q 000410 168 FASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHL 246 (1553)
Q Consensus 168 FG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~ 246 (1553)
||+++....... ........+++.|+|||.+. ...++.++|||||||++|||++ |.+||.....
T Consensus 163 fg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~ 227 (277)
T cd05062 163 FGMTRDIYETDY-----YRKGGKGLLPVRWMSPESLK----------DGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN 227 (277)
T ss_pred CCCccccCCcce-----eecCCCCccCHhhcChhHhh----------cCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 998875422110 00111223466799999764 3457889999999999999999 5888875443
Q ss_pred HHHHhc-CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 247 LAYRRG-QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 247 ~~~~~~-~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
...... ........+...+..++++|.+||+.||++||++.|++++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 228 EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 332221 111112233445678999999999999999999999998864
No 153
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=7.5e-32 Score=315.41 Aligned_cols=240 Identities=17% Similarity=0.171 Sum_probs=185.9
Q ss_pred eeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-C
Q 000410 33 LGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF-N 109 (1553)
Q Consensus 33 LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~-g 109 (1553)
||+|+||.||+++.. ++.||+|++.+... ........+..|.++++.++||||++++++++++...|+||||+. +
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~ 78 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRL--KKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGG 78 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHh--hcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCC
Confidence 799999999999886 46799999865311 111223344567889999999999999999999999999999998 5
Q ss_pred CHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 110 SLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 110 sL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
+|.+++...+ .+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++....... .
T Consensus 79 ~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~--------~ 150 (277)
T cd05607 79 DLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK--------T 150 (277)
T ss_pred CHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc--------e
Confidence 9988885432 48899999999999999999999999999999999999999999999999886542110 1
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHHHHhcCCCCC-CCCCC
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRRGQYDPS-QHLEK 262 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~~~~~~~~~~-~~~~~ 262 (1553)
.....|++.|+|||.+. ...++.++||||+||++|||++|.+||.... ............ .....
T Consensus 151 ~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (277)
T cd05607 151 ITQRAGTNGYMAPEILK----------EEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQ 220 (277)
T ss_pred eeccCCCCCccCHHHHc----------cCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhccccccccc
Confidence 12345788999999764 3347889999999999999999999986421 112222221111 11122
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 263 IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..++++++||.+||+.||++||++.|++++
T Consensus 221 ~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 221 NFTEESKDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred cCCHHHHHHHHHHhccCHhhCCCCccchhh
Confidence 346789999999999999999999766644
No 154
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=6.7e-32 Score=311.83 Aligned_cols=246 Identities=16% Similarity=0.138 Sum_probs=194.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECCc-eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEG-LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~-~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.+.||+|+||.||++...++ .+|+|.+.... .. ...+.+|+.+++.++||||+++++++..+...|+||
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~--~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~ 78 (256)
T cd05114 5 ELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA--MS----EEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVT 78 (256)
T ss_pred HcEEeeEecCCcCceEEEEEeccCceEEEEecccCC--cc----HHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEE
Confidence 688999999999999999988764 69999875331 11 245677889999999999999999999999999999
Q ss_pred cccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 105 QYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 105 E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||++ |+|.+++.. .+.+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||.++........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~-- 156 (256)
T cd05114 79 EFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT-- 156 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCcee--
Confidence 9998 699999865 356899999999999999999999999999999999999999999999999988654211100
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCC-CCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQY-DPSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~-~~~~~~ 260 (1553)
......++..|+|||.+. ...++.++||||+||++|||++ |++||............. ......
T Consensus 157 ----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~ 222 (256)
T cd05114 157 ----SSSGAKFPVKWSPPEVFN----------FSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYR 222 (256)
T ss_pred ----ccCCCCCchhhCChhhcc----------cCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCC
Confidence 001112345799999764 3357889999999999999999 899997544332211111 111223
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+...+..+.+++.+||+.||++||+++++++.+
T Consensus 223 ~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 223 PKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred CCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 444567899999999999999999999999864
No 155
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=1.2e-31 Score=311.68 Aligned_cols=249 Identities=15% Similarity=0.124 Sum_probs=197.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~ 100 (1553)
+|++.+.||+|+||+||+|.+.. ..|++|++.... .......+.+|..+++.++||||+++++++...+..
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (266)
T cd05033 5 YVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS----SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPV 80 (266)
T ss_pred HceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC----ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCce
Confidence 78999999999999999998742 359999885432 233445677788999999999999999999999999
Q ss_pred EEEecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 101 YLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
|++|||++ ++|.+++... +.+++.++..++.|++.||.|||++||+||||||+|||+++++.++|+|||.++......
T Consensus 81 ~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (266)
T cd05033 81 MIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSE 160 (266)
T ss_pred EEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccc
Confidence 99999998 5999998653 468999999999999999999999999999999999999999999999999988663111
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHH---HhcCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY---RRGQY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~---~~~~~ 254 (1553)
. ........++..|+|||.+. ...++.++|||||||++|+|++ |..||........ ....+
T Consensus 161 ~-----~~~~~~~~~~~~y~~Pe~~~----------~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~ 225 (266)
T cd05033 161 A-----TYTTKGGKIPIRWTAPEAIA----------YRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGY 225 (266)
T ss_pred c-----ceeccCCCCCccccChhhhc----------cCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCC
Confidence 1 11111223456799999764 3457889999999999999998 8888853322221 11111
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
.. ..+...++.+.+++.+||+.+|++||+++++++++..
T Consensus 226 ~~--~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~ 264 (266)
T cd05033 226 RL--PPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDK 264 (266)
T ss_pred CC--CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 11 1233456789999999999999999999999998753
No 156
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=4.3e-32 Score=325.40 Aligned_cols=253 Identities=19% Similarity=0.182 Sum_probs=190.5
Q ss_pred EEEEeecc--CcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 29 LKEVLGGS--RFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 29 ~~~~LG~G--~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+++.||+| +|++||++.+.. ..||+|++..... .....+.+.+|.++++.++||||+++++++..++..|+||
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 78 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEAC---TNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 78 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhc---cHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEE
Confidence 45789999 789999998853 5699999865421 2334556778889999999999999999999999999999
Q ss_pred cccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ |+|.+++..+ ..+++..+++++.|++.||+|||++||+||||||+|||++.++.++++||+............
T Consensus 79 e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~ 158 (327)
T cd08227 79 SFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL 158 (327)
T ss_pred eccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence 9999 6999998653 458999999999999999999999999999999999999999999999998654332111110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCC-
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDP- 256 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~- 256 (1553)
...........++..|+|||.+... ...++.++||||+||++|||++|.+||....... ...+....
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~--------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 230 (327)
T cd08227 159 RVVHDFPKYSVKVLPWLSPEVLQQN--------LQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCL 230 (327)
T ss_pred cccccccccccceecccChHHhhcc--------cCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCcccc
Confidence 0001111223456779999987521 2357889999999999999999999996422111 01000000
Q ss_pred -----------------------------------------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 -----------------------------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 -----------------------------------------~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
........++.+++||.+||+.||++|||++|+++|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 231 LDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred ccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 000111234679999999999999999999999998
No 157
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-34 Score=356.83 Aligned_cols=253 Identities=20% Similarity=0.240 Sum_probs=206.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|+....||.|.||+||-|...+ ...|+|-+...+.. ......+.+|..+|..++|||+++||++-..+...||.
T Consensus 1236 rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~---~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1236 RWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD---HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred eeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc---cccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 77888899999999999998854 45899988665322 44455677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||||+ |+|.+.+......++.-.+++..|++.|+.|||++|||||||||+||+++.+|.+|++|||.|..+..+..
T Consensus 1313 MEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~--- 1389 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQ--- 1389 (1509)
T ss_pred HHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchh---
Confidence 99999 79999998887788999999999999999999999999999999999999999999999999987644321
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCC-chHHHH--HHhcCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE-LSHLLA--YRRGQYDPSQH 259 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~-~~~~~~--~~~~~~~~~~~ 259 (1553)
++..-.....||+.|||||++.+.. +.....++||||||||+.||.||+.||. .+.-.+ |.-+.-. .+.
T Consensus 1390 ~~~~el~~~~GT~~YMAPEvit~t~-------~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh-~Pq 1461 (1509)
T KOG4645|consen 1390 TMPGELQSMMGTPMYMAPEVITGTK-------GKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGH-KPQ 1461 (1509)
T ss_pred cCCHHHHhhcCCchhcCchhhcccc-------cCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccC-CCC
Confidence 1222233556899999999997543 2345678999999999999999988884 333222 3222222 233
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+|...+.+-+++|.+||+.||++|.++.|+|+|
T Consensus 1462 ~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1462 IPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred CchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 444467789999999999999999999999998
No 158
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=8.5e-32 Score=312.61 Aligned_cols=256 Identities=18% Similarity=0.143 Sum_probs=202.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCC-CcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGD-YIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~-~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||+|...+ +.+|+|.+..... ..........+.+|+++++.++|+||+++++++.+.+..|++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 47889999999999999998754 5699998865421 122334456688899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||++ ++|.+++.....+++..+..++.|++.||+|||+.||+|+||||+||++++++.++|+|||.+......... .
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-~ 159 (265)
T cd06631 81 MEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLH-G 159 (265)
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccc-c
Confidence 99998 599999988777899999999999999999999999999999999999999999999999988754221111 0
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH-HHh-cCC-CCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-YRR-GQY-DPSQH 259 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-~~~-~~~-~~~~~ 259 (1553)
..........++..|+|||.+. +..++.++|+|||||++|+|++|.+||...+... ... ... ...+.
T Consensus 160 ~~~~~~~~~~~~~~~~~pe~~~----------~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 229 (265)
T cd06631 160 THSNMLKSMHGTPYWMAPEVIN----------ESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPR 229 (265)
T ss_pred cccccccccCCCccccChhhhc----------CCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCC
Confidence 1111223345788899999764 3456789999999999999999999986433221 111 111 12223
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+...+..+.++|.+||+.+|++||++.++++|
T Consensus 230 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 262 (265)
T cd06631 230 LPDSFSAAAIDFVTSCLTRDQHERPSALQLLRH 262 (265)
T ss_pred CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 445567889999999999999999999999987
No 159
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.5e-32 Score=320.40 Aligned_cols=250 Identities=15% Similarity=0.131 Sum_probs=197.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+|.+.+.||.|+||+||+|.+.+ ..||+|++.... .....+.+.+|..+++.++||||+++++++.+..
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~ 81 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA----EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ 81 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC----CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC
Confidence 57888999999999999998742 459999986432 2334566888889999999999999999999999
Q ss_pred EEEEEecccc-CCHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 161 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~ 161 (1553)
..++++||+. ++|.+++..+ ..+++..+..++.|++.||.|||++||+||||||+|||++.++
T Consensus 82 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 82 PLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKL 161 (283)
T ss_pred ceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCC
Confidence 9999999999 6999988432 2478889999999999999999999999999999999999999
Q ss_pred cEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCC
Q 000410 162 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPF 240 (1553)
Q Consensus 162 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~p 240 (1553)
.+||+|||+++..... ..........+++.|+|||.+. ...++.++|||||||++|||++ |.+|
T Consensus 162 ~~kl~Dfg~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~~l~el~~~g~~p 226 (283)
T cd05091 162 NVKISDLGLFREVYAA-----DYYKLMGNSLLPIRWMSPEAIM----------YGKFSIDSDIWSYGVVLWEVFSYGLQP 226 (283)
T ss_pred ceEecccccccccccc-----hheeeccCccCCccccCHHHHh----------cCCCCcchhHHHHHHHHHHHHcCCCCC
Confidence 9999999988754221 1111223344567899999764 3357889999999999999998 7888
Q ss_pred CCchHHHHHHhcCCC-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 241 FELSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 241 f~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
|.............. .....+...+..+.+++.+||+.+|++||++++++..++
T Consensus 227 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 227 YCGYSNQDVIEMIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred CCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 865433322221111 111233445678999999999999999999999998864
No 160
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=6.4e-32 Score=312.00 Aligned_cols=242 Identities=17% Similarity=0.160 Sum_probs=195.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEE-EeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQ-ETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~-~~~~~~~lV~ 104 (1553)
+|++.+.||+|+||.||++...+..+++|.+... ...+.+.+|+.+++.++||||+++++++ ..+...|++|
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~k~~~~~-------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~ 79 (256)
T cd05082 7 ELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND-------ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79 (256)
T ss_pred hCeeeeeecccCCCeEEEEEEcCCcEEEEEeCCC-------chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEE
Confidence 7899999999999999999999888999998532 1234577888999999999999999875 4556799999
Q ss_pred cccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ ++|.+++..++ .+++..+..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~--- 156 (256)
T cd05082 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ--- 156 (256)
T ss_pred ECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccC---
Confidence 9999 69999997643 48899999999999999999999999999999999999999999999999887542211
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcC-CCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQ-YDPSQH 259 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~-~~~~~~ 259 (1553)
....++..|+|||.+. ...++.++|||||||++|||++ |++||............ ......
T Consensus 157 -------~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~ 219 (256)
T cd05082 157 -------DTGKLPVKWTAPEALR----------EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMD 219 (256)
T ss_pred -------CCCccceeecCHHHHc----------cCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCC
Confidence 1222346799999764 3357889999999999999997 89998755443322111 111122
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.+...++.++++|.+||+.||++|||+.++++.+.
T Consensus 220 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 254 (256)
T cd05082 220 APDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLE 254 (256)
T ss_pred CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHh
Confidence 34455678999999999999999999999998865
No 161
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5.8e-32 Score=311.50 Aligned_cols=245 Identities=16% Similarity=0.138 Sum_probs=191.0
Q ss_pred EEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc
Q 000410 31 EVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF 108 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~ 108 (1553)
+.||+|+||.||+|.+. ++.+|+|.+... ...+....+.+|.++++.++||||+++++++......|+||||++
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 76 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET----LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQ 76 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc----CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeecc
Confidence 46899999999999884 467999987543 123445667888899999999999999999999999999999998
Q ss_pred -CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 109 -NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 109 -gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
++|.+++... +.+++.++..++.|++.||.|||++||+||||||+|||++.++.+||+|||.+..... .....
T Consensus 77 ~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~-----~~~~~ 151 (252)
T cd05084 77 GGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEED-----GVYAS 151 (252)
T ss_pred CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCccccc-----ccccc
Confidence 5999999654 4589999999999999999999999999999999999999999999999998864321 01111
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcC-CCCCCCCCCCC
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQ-YDPSQHLEKIP 264 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~-~~~~~~~~~~~ 264 (1553)
.......+..|+|||.+. ...++.++|||||||++|||++ |.+||............ .......+...
T Consensus 152 ~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (252)
T cd05084 152 TGGMKQIPVKWTAPEALN----------YGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVRLPCPELC 221 (252)
T ss_pred cCCCCCCceeecCchhhc----------CCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCCcccC
Confidence 111112345699999764 3457889999999999999998 78888543222211111 11112234455
Q ss_pred CHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 265 DSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 265 ~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+..+.+++.+||+.||++||++.++++.+.
T Consensus 222 ~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 222 PDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 678999999999999999999999998753
No 162
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=5.5e-32 Score=319.98 Aligned_cols=247 Identities=15% Similarity=0.094 Sum_probs=191.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~ 100 (1553)
+|++.+.||+|+||.||+|...+ ..+++|.+... ......+.+.+|..+++++ +||||+++++++......
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~----~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 78 (297)
T cd05089 3 DIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEF----ASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYL 78 (297)
T ss_pred cceeeeeecCCCcceEEEEEecCCCCcceeEEEEcccc----CCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcc
Confidence 68999999999999999998754 23678877432 1223345677888888888 799999999999999999
Q ss_pred EEEecccc-CCHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcE
Q 000410 101 YLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWL 163 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~v 163 (1553)
|++|||++ ++|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.+
T Consensus 79 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 79 YIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred eEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeE
Confidence 99999998 6999999643 248889999999999999999999999999999999999999999
Q ss_pred EEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCC
Q 000410 164 YLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFE 242 (1553)
Q Consensus 164 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~ 242 (1553)
||+|||++...... ........+..|+|||.+. ...++.++|||||||++|||++ |.+||.
T Consensus 159 kl~dfg~~~~~~~~--------~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwSlG~il~el~t~g~~pf~ 220 (297)
T cd05089 159 KIADFGLSRGEEVY--------VKKTMGRLPVRWMAIESLN----------YSVYTTKSDVWSFGVLLWEIVSLGGTPYC 220 (297)
T ss_pred EECCcCCCccccce--------eccCCCCcCccccCchhhc----------cCCCCchhhHHHHHHHHHHHHcCCCCCCC
Confidence 99999987532110 0001112244699999663 3457889999999999999997 888986
Q ss_pred chHHHHHHh-cCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 243 LSHLLAYRR-GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 243 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
......... .........+...+..+++||.+||+.||.+||+++++++.+.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 273 (297)
T cd05089 221 GMTCAELYEKLPQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLS 273 (297)
T ss_pred CCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 544332211 1111112234455678999999999999999999999987654
No 163
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=1.1e-31 Score=311.86 Aligned_cols=252 Identities=19% Similarity=0.191 Sum_probs=198.9
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe--CCEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET--DKAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~--~~~~~ 101 (1553)
+|+..+.||+|+||.||+|.+. +..|++|++...............+.+|+.+++.++||||+++++++.+ +...|
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 6889999999999999999875 3679999987653322334455678888999999999999999998865 46789
Q ss_pred EEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+++||++ ++|.+++...+.+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||++.........
T Consensus 83 l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~ 162 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS 162 (266)
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc
Confidence 9999998 599999987777999999999999999999999999999999999999999999999999988754211110
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HHHHhcCC-CCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LAYRRGQY-DPSQ 258 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~~~~~~~-~~~~ 258 (1553)
.. ......++..|+|||.+. +..++.++|+||+||++|||++|.+||..... ..+..... ...+
T Consensus 163 ~~----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~~~ 228 (266)
T cd06651 163 GT----GIRSVTGTPYWMSPEVIS----------GEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPTNP 228 (266)
T ss_pred CC----ccccCCccccccCHHHhC----------CCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCCCC
Confidence 00 011234677899999764 33568899999999999999999999964432 22222111 1223
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.++...++.++++| +||..+|++||+++|+++|
T Consensus 229 ~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~h 261 (266)
T cd06651 229 QLPSHISEHARDFL-GCIFVEARHRPSAEELLRH 261 (266)
T ss_pred CCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcC
Confidence 34555567899999 6777899999999999998
No 164
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=9.6e-32 Score=316.42 Aligned_cols=256 Identities=15% Similarity=0.109 Sum_probs=197.6
Q ss_pred cceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD 97 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~ 97 (1553)
.+|++.+.||+|+||.||+|.+++ ..||+|.+.... . ......+.+|..+++.++||||+++++++.+.
T Consensus 6 ~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~ 81 (288)
T cd05061 6 EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA---S-LRERIEFLNEASVMKGFTCHHVVRLLGVVSKG 81 (288)
T ss_pred HHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC---C-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC
Confidence 379999999999999999997642 359999875431 1 22234566788899999999999999999988
Q ss_pred CEEEEEecccc-CCHHHHhcCC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEe
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTP----------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLS 166 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~----------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~ 166 (1553)
...|+||||++ |+|.+++... +.++...+..++.||+.||.|||++||+||||||+|||+++++.++|+
T Consensus 82 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~ 161 (288)
T cd05061 82 QPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIG 161 (288)
T ss_pred CCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEEC
Confidence 99999999998 6999999642 335677889999999999999999999999999999999999999999
Q ss_pred ecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchH
Q 000410 167 DFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH 245 (1553)
Q Consensus 167 DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~ 245 (1553)
|||+++........ .......++..|+|||.+. ...++.++|||||||++|||++ |.+||....
T Consensus 162 Dfg~~~~~~~~~~~-----~~~~~~~~~~~y~~pE~~~----------~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~ 226 (288)
T cd05061 162 DFGMTRDIYETDYY-----RKGGKGLLPVRWMAPESLK----------DGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS 226 (288)
T ss_pred cCCccccccccccc-----cccCCCcccccccCHHHhc----------cCCCChHhHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 99988754221110 0111223356799999764 3457889999999999999998 688886544
Q ss_pred HHHHHhcCCC-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhcccCC
Q 000410 246 LLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFP 299 (1553)
Q Consensus 246 ~~~~~~~~~~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fP 299 (1553)
...+...... .....+...++.+++++.+||+.||++||++.++++.++....|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~ 281 (288)
T cd05061 227 NEQVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHP 281 (288)
T ss_pred HHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCC
Confidence 3333221111 11122334457899999999999999999999999988766554
No 165
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1e-31 Score=311.68 Aligned_cols=246 Identities=16% Similarity=0.159 Sum_probs=196.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+.+.||+|+||.||+|... +..|++|++.+.. .....+.+|+++++.++||||+++++++..+...+++
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (263)
T cd05052 7 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT------MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 80 (263)
T ss_pred HeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc------hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEE
Confidence 6899999999999999999886 3669999985431 1134567788999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||++ ++|.+++... ..+++..+..++.|++.||+|||++|++||||||+||++++++.+||+|||.+........
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~- 159 (263)
T cd05052 81 TEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY- 159 (263)
T ss_pred EEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCcccccccccee-
Confidence 99998 6999998653 3589999999999999999999999999999999999999999999999999875421110
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHH---HhcCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY---RRGQYDP 256 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~---~~~~~~~ 256 (1553)
. .......+..|+|||.+. +..++.++|||||||++|||++ |.+||........ ....+
T Consensus 160 ----~-~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~-- 222 (263)
T cd05052 160 ----T-AHAGAKFPIKWTAPESLA----------YNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY-- 222 (263)
T ss_pred ----e-ccCCCCCccccCCHHHhc----------cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC--
Confidence 0 001122345699999663 3467889999999999999998 8899865443332 22222
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
....+...+..+.++|.+||+.||++||++.++++.+..
T Consensus 223 ~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~ 261 (263)
T cd05052 223 RMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFET 261 (263)
T ss_pred CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHh
Confidence 222344456789999999999999999999999998653
No 166
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=8.6e-32 Score=317.54 Aligned_cols=251 Identities=17% Similarity=0.168 Sum_probs=196.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~ 97 (1553)
+|++.+.||+|+||.||++.+.+ ..+|+|.+.... . ......+.+|+++++.+ +||||+++++++..+
T Consensus 13 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~---~-~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 13 RLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA---T-EKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred HeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC---C-HHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 79999999999999999998743 458999886431 1 22334577888899999 799999999999999
Q ss_pred CEEEEEecccc-CCHHHHhcC----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC
Q 000410 98 KAAYLLRQYFF-NSLRDRLST----------------PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW 160 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~----------------~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~ 160 (1553)
...|++|||+. |+|.+++.. ...+++.++..++.||+.||+|||++||+||||||+|||++.+
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~ 168 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTED 168 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCC
Confidence 99999999998 699999853 2358899999999999999999999999999999999999999
Q ss_pred CcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCC
Q 000410 161 NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVP 239 (1553)
Q Consensus 161 ~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~ 239 (1553)
+.+||+|||.++...... .........++..|+|||.+. ...++.++|||||||++|||++ |..
T Consensus 169 ~~~kL~Dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~el~~~g~~ 233 (293)
T cd05053 169 HVMKIADFGLARDIHHID-----YYRKTTNGRLPVKWMAPEALF----------DRVYTHQSDVWSFGVLLWEIFTLGGS 233 (293)
T ss_pred CeEEeCcccccccccccc-----ceeccCCCCCCccccCHHHhc----------cCCcCcccceeehhhHHHHHhcCCCC
Confidence 999999999987652211 111111223456799999663 3457889999999999999997 888
Q ss_pred CCCchHHHHHHhcCC-CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 240 FFELSHLLAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 240 pf~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
||............. ......+...+..+.+|+.+||..||++|||+.|+++++..
T Consensus 234 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~ 290 (293)
T cd05053 234 PYPGIPVEELFKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDR 290 (293)
T ss_pred CCCCCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHH
Confidence 886544332222111 11112333446789999999999999999999999998764
No 167
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=2.4e-32 Score=320.71 Aligned_cols=248 Identities=21% Similarity=0.261 Sum_probs=193.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++. +..|++|++...... ......+.+|+++++.++||||+++++++.+....|+|
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~---~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv 77 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDD---EGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLV 77 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeeccccc---ccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEE
Confidence 4788999999999999999985 367999998654211 12234466778899999999999999999999999999
Q ss_pred eccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||++++|.+++.. .+.+++..++.++.||+.||.|||++||+||||||+||+++.++.++|+|||+++....+..
T Consensus 78 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~--- 154 (284)
T cd07839 78 FEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR--- 154 (284)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC---
Confidence 99999999998864 56699999999999999999999999999999999999999999999999999875432211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCC-CCchHHHHH----Hhc-----
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF-FELSHLLAY----RRG----- 252 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p-f~~~~~~~~----~~~----- 252 (1553)
......+++.|+|||.+.+ ...++.++|||||||++|+|++|..| |........ .+.
T Consensus 155 ----~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 221 (284)
T cd07839 155 ----CYSAEVVTLWYRPPDVLFG---------AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT 221 (284)
T ss_pred ----CcCCCccccCCcChHHHhC---------CcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCC
Confidence 1123345788999998742 23468899999999999999998544 543322111 000
Q ss_pred -----------CCCCCCC---------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 -----------QYDPSQH---------LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 -----------~~~~~~~---------~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+..... .....++.++++|.+||+.||.+|||++++++|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h 281 (284)
T cd07839 222 EESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQH 281 (284)
T ss_pred hHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcC
Confidence 0000000 011235789999999999999999999999998
No 168
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.4e-31 Score=313.37 Aligned_cols=250 Identities=16% Similarity=0.131 Sum_probs=195.9
Q ss_pred CccceEEEEEeeccCcEEEEEEEEC--Cc----eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe
Q 000410 23 SSYNLVLKEVLGGSRFFKSILCKHD--EG----LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET 96 (1553)
Q Consensus 23 ~~~~y~~~~~LG~G~fg~V~~a~~~--~~----~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~ 96 (1553)
...+|++.+.||+|+||.||+|++. +. .||+|++.... .....+.+.+|..+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~ 80 (279)
T cd05109 5 KETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENT----SPKANKEILDEAYVMAGVGSPYVCRLLGICLT 80 (279)
T ss_pred chhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCC----CHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC
Confidence 3448999999999999999999863 22 37899886442 23445667788889999999999999998875
Q ss_pred CCEEEEEecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccc
Q 000410 97 DKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174 (1553)
Q Consensus 97 ~~~~~lV~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~ 174 (1553)
. ..++++||++ |+|.+++..+ +.+++.++..++.|++.||+|||++||+||||||+|||++.++.+||+|||+++..
T Consensus 81 ~-~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 81 S-TVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred C-CcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeec
Confidence 4 4789999999 7999999764 56899999999999999999999999999999999999999999999999998765
Q ss_pred cCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH---HH
Q 000410 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA---YR 250 (1553)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~---~~ 250 (1553)
..... ........+++.|+|||.+. ...++.++|||||||++|||++ |.+||....... ..
T Consensus 160 ~~~~~-----~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~ 224 (279)
T cd05109 160 DIDET-----EYHADGGKVPIKWMALESIL----------HRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLL 224 (279)
T ss_pred ccccc-----eeecCCCccchhhCCHHHhc----------cCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence 32211 11112223456799999764 3457889999999999999998 899987543322 22
Q ss_pred hcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 251 RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 251 ~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
...... ..+...+..+.++|.+||..||++||++.++++.+.
T Consensus 225 ~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~ 266 (279)
T cd05109 225 EKGERL--PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFS 266 (279)
T ss_pred HCCCcC--CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 221111 123345678999999999999999999999998764
No 169
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=1.4e-31 Score=309.19 Aligned_cols=243 Identities=18% Similarity=0.205 Sum_probs=199.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEec
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQ 105 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E 105 (1553)
+|++.+.||+|+||.||+|...++.|++|.+.... ...+++..|..+++.++||||+++++++.+....|+|||
T Consensus 7 ~~~~~~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~------~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e 80 (256)
T cd05039 7 ELKLGATIGKGEFGDVMLGDYRGQKVAVKCLKDDS------TAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTE 80 (256)
T ss_pred hccceeeeecCCCceEEEEEecCcEEEEEEeccch------hHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEE
Confidence 78999999999999999999999999999986541 145567788899999999999999999998899999999
Q ss_pred ccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 106 YFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 106 ~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|++ ++|.+++..+. .+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||.++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~---- 156 (256)
T cd05039 81 YMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ---- 156 (256)
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEccccccccccccc----
Confidence 999 69999997665 68999999999999999999999999999999999999999999999999987552111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCC-CCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQY-DPSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~-~~~~~~ 260 (1553)
.....+..|+|||.+. ...++.++|||||||++|||++ |..||............. ......
T Consensus 157 ------~~~~~~~~~~ape~~~----------~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 220 (256)
T cd05039 157 ------DSGKLPVKWTAPEALR----------EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYRMEA 220 (256)
T ss_pred ------ccCCCcccccCchhhc----------CCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 1122345699999764 3456789999999999999997 898986554333221111 111223
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+...++.+.++|.+||..+|++||+++++++.+.
T Consensus 221 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 254 (256)
T cd05039 221 PEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLA 254 (256)
T ss_pred ccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHh
Confidence 3445678999999999999999999999999864
No 170
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.98 E-value=1.2e-31 Score=309.74 Aligned_cols=246 Identities=13% Similarity=0.119 Sum_probs=194.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECCc-eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEG-LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~-~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.+.||+|+||.||++++.++ .+|+|.+.... .. ...+.+|..+++.++||||+++++++......|++|
T Consensus 5 ~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~--~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05113 5 DLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS--MS----EDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVT 78 (256)
T ss_pred HeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc--cc----HHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEE
Confidence 789999999999999999988764 59999875431 11 234677888999999999999999999888899999
Q ss_pred cccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||+. |+|.+++... ..+++.++..++.||+.||.|||++|++|+||||+||+++.++.+||+|||.++....+.
T Consensus 79 e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~---- 154 (256)
T cd05113 79 EYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE---- 154 (256)
T ss_pred EcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCc----
Confidence 9998 6999999763 468999999999999999999999999999999999999999999999999887542211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHH-hcCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYR-RGQYDPSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~-~~~~~~~~~~ 260 (1553)
.. ......++..|+|||.+. ...++.++|||||||++|+|++ |..||......... ..........
T Consensus 155 -~~-~~~~~~~~~~y~~pe~~~----------~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 222 (256)
T cd05113 155 -YT-SSVGSKFPVRWSPPEVLL----------YSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYR 222 (256)
T ss_pred -ee-ecCCCccChhhCCHHHHh----------cCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCC
Confidence 00 011122456799999764 3357889999999999999998 88888643322211 1111111123
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+...++.+++++.+||+.||.+||++.++++.+
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~ 255 (256)
T cd05113 223 PHLASEKVYAIMYSCWHEKAEERPTFQQLLSSI 255 (256)
T ss_pred CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhh
Confidence 344568999999999999999999999999874
No 171
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.98 E-value=1.4e-31 Score=312.97 Aligned_cols=250 Identities=14% Similarity=0.097 Sum_probs=196.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+|++.+.||+|+||.||++...+ ..|++|.+.... .......+.+|+.+++.++||||+++++++....
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~----~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~ 82 (277)
T cd05032 7 KITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA----SMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ 82 (277)
T ss_pred HeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc----CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC
Confidence 78999999999999999998753 459999975431 1223445677889999999999999999999999
Q ss_pred EEEEEecccc-CCHHHHhcCC----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEee
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP----------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSD 167 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~----------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~D 167 (1553)
..|+||||++ |+|.+++... ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|
T Consensus 83 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~d 162 (277)
T cd05032 83 PTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECC
Confidence 9999999998 6999998542 2367889999999999999999999999999999999999999999999
Q ss_pred cCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHH
Q 000410 168 FASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHL 246 (1553)
Q Consensus 168 FG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~ 246 (1553)
||.++...... .........++..|+|||.+. ...++.++|||||||++|||++ |.+||.....
T Consensus 163 fg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 227 (277)
T cd05032 163 FGMTRDIYETD-----YYRKGGKGLLPVRWMAPESLK----------DGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN 227 (277)
T ss_pred cccchhhccCc-----ccccCCCCCccccccCHHHHh----------cCCCCcccchHHHHHHHHHhhccCCCCCccCCH
Confidence 99987553221 111112334567899999764 3457889999999999999998 8999965433
Q ss_pred HHHHhcC-CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 247 LAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 247 ~~~~~~~-~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
....+.. .......+...+..+.++|.+||+.+|++|||+.++++.+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 228 EEVLKFVIDGGHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 2221111 11112233344678999999999999999999999998753
No 172
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.98 E-value=1.3e-31 Score=314.87 Aligned_cols=246 Identities=17% Similarity=0.182 Sum_probs=195.1
Q ss_pred eEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|+..+.||+|+||.||++.+.. +.||+|.+.+... ........+..|+.+++.++|+||+++++.+.+++..|+||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRI--KKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL 79 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhc--cchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEE
Confidence 6778999999999999999864 6799999865421 12233445667888999999999999999999999999999
Q ss_pred cccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||+. ++|.+++... ..+++.++..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--- 156 (285)
T cd05630 80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ--- 156 (285)
T ss_pred EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc---
Confidence 9998 5999988543 348999999999999999999999999999999999999999999999999886431110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HHHHhcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~~~~~~~~~~ 257 (1553)
......|+..|+|||.+. +..++.++||||+||++|+|++|.+||..... ...........
T Consensus 157 -----~~~~~~g~~~y~aPE~~~----------~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~ 221 (285)
T cd05630 157 -----TIKGRVGTVGYMAPEVVK----------NERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQ 221 (285)
T ss_pred -----cccCCCCCccccChHHHc----------CCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhh
Confidence 012235788899999764 34578899999999999999999999974321 11111111111
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 292 (1553)
...+...++.+++||.+||+.||++||| ++|+++|
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 222 EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 2233445678999999999999999999 8999998
No 173
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.98 E-value=5.2e-32 Score=314.80 Aligned_cols=248 Identities=19% Similarity=0.168 Sum_probs=196.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++.+ ..||+|++.... ......+.+|..+++.++||||+++++.+..+...|+|
T Consensus 10 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv 84 (267)
T cd06645 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEP-----GEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWIC 84 (267)
T ss_pred HHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCc-----hhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEE
Confidence 68888999999999999998853 669999986542 11223466778899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ ++|.+++...+.+++.++..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+.........
T Consensus 85 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~-- 162 (267)
T cd06645 85 MEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAK-- 162 (267)
T ss_pred EeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccc--
Confidence 99999 599999988888999999999999999999999999999999999999999999999999988654221111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HH---HHHhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LL---AYRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~---~~~~~~~~~~~ 258 (1553)
.....|+..|+|||.+... ....++.++|+||+||++|+|++|.+||.... .. ........+..
T Consensus 163 -----~~~~~~~~~y~aPE~~~~~-------~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 230 (267)
T cd06645 163 -----RKSFIGTPYWMAPEVAAVE-------RKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPK 230 (267)
T ss_pred -----cccccCcccccChhhhccc-------cCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCc
Confidence 1123467889999987421 23457889999999999999999988874322 11 11222222211
Q ss_pred CCC-CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLE-KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~-~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... ...+..++++|.+||..||++||+++++++|
T Consensus 231 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~ 265 (267)
T cd06645 231 LKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQH 265 (267)
T ss_pred ccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcC
Confidence 111 1235679999999999999999999999987
No 174
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.98 E-value=1.2e-31 Score=328.18 Aligned_cols=250 Identities=16% Similarity=0.170 Sum_probs=194.7
Q ss_pred cceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEe
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQET 96 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~ 96 (1553)
.+|++++.||+|+||.||+|.+.. ..||||++.... .....+.+.+|+++++.+. ||||+++++++..
T Consensus 37 ~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~----~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~ 112 (400)
T cd05105 37 DGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA----RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK 112 (400)
T ss_pred cceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC----ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc
Confidence 378899999999999999998632 259999985431 1233456788889999996 9999999999999
Q ss_pred CCEEEEEecccc-CCHHHHhcCC---------------------------------------------------------
Q 000410 97 DKAAYLLRQYFF-NSLRDRLSTP--------------------------------------------------------- 118 (1553)
Q Consensus 97 ~~~~~lV~E~~~-gsL~d~l~~~--------------------------------------------------------- 118 (1553)
....|||||||+ |+|.+++..+
T Consensus 113 ~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
T cd05105 113 SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPML 192 (400)
T ss_pred CCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhh
Confidence 999999999999 6999887532
Q ss_pred ---------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec
Q 000410 119 ---------------------------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS 159 (1553)
Q Consensus 119 ---------------------------------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~ 159 (1553)
..+++.++..++.||+.||+|||++||+||||||+|||++.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~ 272 (400)
T cd05105 193 EIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeC
Confidence 13778888999999999999999999999999999999999
Q ss_pred CCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CC
Q 000410 160 WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EV 238 (1553)
Q Consensus 160 ~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~ 238 (1553)
++.+||+|||+++........ .......+++.|+|||.+. +..++.++|||||||++|||++ |.
T Consensus 273 ~~~~kL~DfGla~~~~~~~~~-----~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwSlGvil~ellt~g~ 337 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSNY-----VSKGSTFLPVKWMAPESIF----------DNLYTTLSDVWSYGILLWEIFSLGG 337 (400)
T ss_pred CCEEEEEeCCcceeccccccc-----cccCCcCCCcceEChhhhc----------CCCCCchhhHHHHHHHHHHHHHCCC
Confidence 999999999998754221110 0112233567799999764 3457889999999999999997 78
Q ss_pred CCCCchH----HHHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 239 PFFELSH----LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 239 ~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
.||.... .......... ...+...+..+.+++.+||+.||++||++.++.+.+..
T Consensus 338 ~P~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~ 396 (400)
T cd05105 338 TPYPGMIVDSTFYNKIKSGYR--MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVES 396 (400)
T ss_pred CCCcccchhHHHHHHHhcCCC--CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHH
Confidence 8885421 1111222211 12233446789999999999999999999999988653
No 175
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.98 E-value=3.5e-32 Score=314.85 Aligned_cols=244 Identities=23% Similarity=0.252 Sum_probs=188.6
Q ss_pred EEEEEeeccCcEEEEEEEEC------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEE
Q 000410 28 VLKEVLGGSRFFKSILCKHD------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 28 ~~~~~LG~G~fg~V~~a~~~------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
++.+.||.|.||.||+|.+. +..|+||++... ...+..+.+.+|.+.++.++||||+++++++......+
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~----~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~ 77 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS----SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLF 77 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT----SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc----cccccceeeeeccccccccccccccccccccccccccc
Confidence 57899999999999999987 356999999432 22334567778889999999999999999999888899
Q ss_pred EEecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 102 LLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
+|+||++ |+|.+++... ..+++.++..|+.||+.||.|||+++++||||+++||++++++.+||+|||++......
T Consensus 78 lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~- 156 (259)
T PF07714_consen 78 LVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK- 156 (259)
T ss_dssp EEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTS-
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 9999999 6999999876 66999999999999999999999999999999999999999999999999998765211
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH----HHhcC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA----YRRGQ 253 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~----~~~~~ 253 (1553)
..............|+|||.+. ...++.++||||||+++|||++ |..||....... +.++.
T Consensus 157 ----~~~~~~~~~~~~~~~~aPE~~~----------~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~ 222 (259)
T PF07714_consen 157 ----SKYKNDSSQQLPLRYLAPEVLK----------DGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQ 222 (259)
T ss_dssp ----SSEEESTTSESGGGGS-HHHHH----------HSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTE
T ss_pred ----cccccccccccccccccccccc----------cccccccccccccccccccccccccccccccccccccccccccc
Confidence 1111222333567799999775 2347899999999999999999 578886433322 22222
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 254 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 254 ~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
. ...+...+..+.++|.+||..||++||++.++++.+
T Consensus 223 ~---~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 223 R---LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp E---TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred c---ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 2 123344567899999999999999999999999864
No 176
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.98 E-value=1.2e-31 Score=310.02 Aligned_cols=244 Identities=19% Similarity=0.191 Sum_probs=196.7
Q ss_pred EEeeccCcEEEEEEEEC-----CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEec
Q 000410 31 EVLGGSRFFKSILCKHD-----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQ 105 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~-----~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E 105 (1553)
+.||+|+||.||+|... +..|++|++..... ....+.+.+|++.++.++||||+++++++.++...++|||
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e 76 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDAS----EEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLE 76 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccc----hhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEE
Confidence 46999999999999986 45699999865422 1145667888899999999999999999999999999999
Q ss_pred ccc-CCHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccccc
Q 000410 106 YFF-NSLRDRLSTP---------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTY 175 (1553)
Q Consensus 106 ~~~-gsL~d~l~~~---------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~ 175 (1553)
|++ ++|.+++... ..+++.++..++.|++.||+|||++||+||||||+||+++.++.++|+|||.+....
T Consensus 77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 77 YMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred eccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccc
Confidence 996 7999999875 679999999999999999999999999999999999999999999999999987653
Q ss_pred CCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCC
Q 000410 176 IPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQY 254 (1553)
Q Consensus 176 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~ 254 (1553)
.... ........++..|+|||.+. ...++.++||||+||++|+|++ |.+||.......+.....
T Consensus 157 ~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~ 221 (262)
T cd00192 157 DDDY-----YRKKTGGKLPIRWMAPESLK----------DGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLR 221 (262)
T ss_pred cccc-----cccccCCCcCccccCHHHhc----------cCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence 2211 01112334577899999764 2367889999999999999999 599997554333222111
Q ss_pred -CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 255 -DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 255 -~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
......+...+..+.+++.+||+.||.+||+++|+++++
T Consensus 222 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l 261 (262)
T cd00192 222 KGYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERL 261 (262)
T ss_pred cCCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 112223444467899999999999999999999999875
No 177
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.98 E-value=2.8e-31 Score=306.58 Aligned_cols=247 Identities=21% Similarity=0.260 Sum_probs=196.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe-CCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET-DKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~-~~~~~l 102 (1553)
+|++.+.||.|+||.||++.+.. +.|++|.+..... .....+.+.+|.++++.++|||++++++.+.. +...|+
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~l 77 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNA---SRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYI 77 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhc---CHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEE
Confidence 48999999999999999998854 5699999865421 12334557788899999999999999988764 456899
Q ss_pred Eecccc-CCHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCC
Q 000410 103 LRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~ 179 (1553)
+|||++ ++|.+++.. ...+++.+++.++.|++.||.+||++||+||||||+||+++.++.++|+|||+++.......
T Consensus 78 v~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~ 157 (257)
T cd08223 78 VMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD 157 (257)
T ss_pred EecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence 999998 599999865 34589999999999999999999999999999999999999999999999999875532211
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCC-CCCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY-DPSQ 258 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~-~~~~ 258 (1553)
......+++.|+|||.+. +..++.++|+||+||++|+|++|++||...+......... ...+
T Consensus 158 -------~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~ 220 (257)
T cd08223 158 -------MASTLIGTPYYMSPELFS----------NKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP 220 (257)
T ss_pred -------ccccccCCcCccChhHhc----------CCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC
Confidence 112334678899999764 3457789999999999999999999997654333211111 1111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+...++.+.++|.+||+.||++||++.++++|
T Consensus 221 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 221 PMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred CCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 2334456789999999999999999999999998
No 178
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.9e-33 Score=324.35 Aligned_cols=260 Identities=19% Similarity=0.176 Sum_probs=205.3
Q ss_pred ccccccCCCccceEEEEEeeccCcEEEEEEEECCc--eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEE
Q 000410 15 EYYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDEG--LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQF 92 (1553)
Q Consensus 15 ~~~~~~l~~~~~y~~~~~LG~G~fg~V~~a~~~~~--~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~ 92 (1553)
++.-.|+...--|.++..||.|+||+||+|..++. ..|.|++... . ++..+.+.-|++||..++||+|+++++
T Consensus 22 ehv~rdlnP~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetk----s-eEELEDylVEIeILa~CdHP~ivkLl~ 96 (1187)
T KOG0579|consen 22 EHVYRDLNPRDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK----S-EEELEDYLVEIEILAECDHPVIVKLLS 96 (1187)
T ss_pred HHHhccCCHHHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhccc----c-hhHHhhhhhhhhhhhcCCChHHHHHHH
Confidence 34445565555688889999999999999998763 2677877543 1 233344556779999999999999999
Q ss_pred EEEeCCEEEEEeccccCC-HHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCc
Q 000410 93 WQETDKAAYLLRQYFFNS-LRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFAS 170 (1553)
Q Consensus 93 ~~~~~~~~~lV~E~~~gs-L~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~ 170 (1553)
.|..++.++|+.|||+|. ....+-. ...|++.++..+++|++.||.|||+++|||||||..|||++-+|.++|+|||.
T Consensus 97 ayy~enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGV 176 (1187)
T KOG0579|consen 97 AYYFENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGV 176 (1187)
T ss_pred HHhccCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccc
Confidence 998899999999999964 4444432 34599999999999999999999999999999999999999999999999997
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-H---
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-L--- 246 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~--- 246 (1553)
+.... ......++..|||+|||||+..... ....+|+.++||||||++|.||.-+.||...-+ +
T Consensus 177 SAKn~-------~t~qkRDsFIGTPYWMAPEVvmCET-----~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVl 244 (1187)
T KOG0579|consen 177 SAKNK-------STRQKRDSFIGTPYWMAPEVVMCET-----FKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVL 244 (1187)
T ss_pred cccch-------hHHhhhccccCCcccccchheeecc-----ccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHH
Confidence 64321 1122346778999999999987543 457899999999999999999999999986433 2
Q ss_pred HHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 247 LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.++.+... |....+...+..+.+++.+||.+||..||++.++|+|
T Consensus 245 lKiaKSeP-PTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~H 289 (1187)
T KOG0579|consen 245 LKIAKSEP-PTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKH 289 (1187)
T ss_pred HHHhhcCC-CcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhC
Confidence 22222221 2223444556789999999999999999999999998
No 179
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.98 E-value=1.5e-31 Score=312.90 Aligned_cols=250 Identities=16% Similarity=0.115 Sum_probs=194.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+|++.+.||+|+||.||+|.+.+ ..|++|.+... ........+.+|..+++.++||||+++++++.+..
T Consensus 7 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~----~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (277)
T cd05036 7 SITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES----CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL 82 (277)
T ss_pred HcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC----CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC
Confidence 68999999999999999998854 45888877433 11233455777888999999999999999998888
Q ss_pred EEEEEecccc-CCHHHHhcCCC-------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC---cEEEee
Q 000410 99 AAYLLRQYFF-NSLRDRLSTPP-------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN---WLYLSD 167 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~~-------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~---~vkL~D 167 (1553)
..|+||||+. ++|.+++.... .+++.++..++.||+.||+|||++|++||||||+||+++.++ .+||+|
T Consensus 83 ~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 83 PRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred CcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEecc
Confidence 9999999998 69999986532 488999999999999999999999999999999999998765 599999
Q ss_pred cCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHH
Q 000410 168 FASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHL 246 (1553)
Q Consensus 168 FG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~ 246 (1553)
||+++...... ..........+..|+|||.+. +..++.++|||||||++|||++ |..||.....
T Consensus 163 fg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~ 227 (277)
T cd05036 163 FGMARDIYRAS-----YYRKGGRAMLPIKWMPPEAFL----------DGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN 227 (277)
T ss_pred CccccccCCcc-----ceecCCCCCccHhhCCHHHHh----------cCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH
Confidence 99987652111 000011112245799999764 3457899999999999999997 8999976443
Q ss_pred HHHHhcCC-CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 247 LAYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 247 ~~~~~~~~-~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
........ ......+...+..+.+++.+||+.||++||++.++++++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 228 QEVMEFVTGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 33222111 1112233444678999999999999999999999999864
No 180
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.98 E-value=1.4e-31 Score=318.20 Aligned_cols=252 Identities=18% Similarity=0.175 Sum_probs=196.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC---------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE---------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQE 95 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~---------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~ 95 (1553)
+|.+.+.||+|+||.||++++.+ ..+|+|++.... . ......+.+|.++++.+ +||||+++++++.
T Consensus 19 ~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~---~-~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (307)
T cd05098 19 RLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA---T-EKDLSDLISEMEMMKMIGKHKNIINLLGACT 94 (307)
T ss_pred HeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC---C-hHHHHHHHHHHHHHHHhcCCCCEeeEEEEEe
Confidence 79999999999999999998632 359999886431 1 22234566788889988 7999999999999
Q ss_pred eCCEEEEEecccc-CCHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEe
Q 000410 96 TDKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 158 (1553)
Q Consensus 96 ~~~~~~lV~E~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~ 158 (1553)
.+...|+||||++ |+|.+++..+ ..+++.++..++.|++.||+|||++|++||||||+|||++
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~ 174 (307)
T cd05098 95 QDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT 174 (307)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEc
Confidence 9999999999999 6999999653 2478899999999999999999999999999999999999
Q ss_pred cCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-C
Q 000410 159 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 237 (1553)
Q Consensus 159 ~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 237 (1553)
.++.++|+|||.++....... ........+++.|+|||.+. +..++.++|||||||++|||++ |
T Consensus 175 ~~~~~kL~dfg~a~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~~l~el~~~g 239 (307)
T cd05098 175 EDNVMKIADFGLARDIHHIDY-----YKKTTNGRLPVKWMAPEALF----------DRIYTHQSDVWSFGVLLWEIFTLG 239 (307)
T ss_pred CCCcEEECCCcccccccccch-----hhccccCCCccceeChHHhc----------cCCCCcHHHHHHHHHHHHHHHcCC
Confidence 999999999998865421110 00011122346799999764 3457889999999999999998 7
Q ss_pred CCCCCchHHHHHHhcC-CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhcc
Q 000410 238 VPFFELSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAV 296 (1553)
Q Consensus 238 ~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~ 296 (1553)
.+||............ .......+...+..+.+||.+||..+|++||++.++++++...
T Consensus 240 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~ 299 (307)
T cd05098 240 GSPYPGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 299 (307)
T ss_pred CCCCCcCCHHHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 8888765543322211 1111123344567899999999999999999999999987643
No 181
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.98 E-value=2.7e-31 Score=308.66 Aligned_cols=251 Identities=17% Similarity=0.129 Sum_probs=197.4
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++. ++.||||.+..... ........+.+|+++++.++||||+++++++.+.+..|++
T Consensus 3 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08228 3 NFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEM--MDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIV 80 (267)
T ss_pred ceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeecccc--CCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEE
Confidence 7999999999999999999885 46799998865321 1234455677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 104 RQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
+||++ ++|.+++. ....+++..+..++.||+.||.|||++|++||||||+||+++.++.++|+|||.+.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~ 160 (267)
T cd08228 81 LELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh
Confidence 99999 59988874 23458999999999999999999999999999999999999999999999999887542111
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH--HHHHHhc--CC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH--LLAYRRG--QY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~--~~~~~~~--~~ 254 (1553)
.......+++.|+|||.+. +..++.++|+||+||++|||++|..||.... ...+... ..
T Consensus 161 -------~~~~~~~~~~~~~aPE~~~----------~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~ 223 (267)
T cd08228 161 -------TAAHSLVGTPYYMSPERIH----------ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQC 223 (267)
T ss_pred -------HHHhcCCCCccccChhhhc----------cCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcC
Confidence 0112334678899999764 2356788999999999999999987874321 1111111 11
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
...+......+..++++|.+||+.+|++||+++++++.+++
T Consensus 224 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~ 264 (267)
T cd08228 224 DYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQ 264 (267)
T ss_pred CCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHH
Confidence 11112223345789999999999999999999999998654
No 182
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=4e-33 Score=344.28 Aligned_cols=253 Identities=19% Similarity=0.235 Sum_probs=207.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+++.||+|+||.|.+++++. ..||+|++.|-. .-......-|.+|+.+|...+.+.|+.++-.|++++++|+|
T Consensus 76 DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~e--MlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~LYlV 153 (1317)
T KOG0612|consen 76 DFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWE--MLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERYLYLV 153 (1317)
T ss_pred hhHHHHHhcccccceeEEEEeeccccchhHHHhhHHH--HhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccceEEE
Confidence 78999999999999999999975 569999997631 00112234588999999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ |+|..++++...+++..+++|+..|+.||.-+|+.|+|||||||+|||++..|++||+|||.+-... .
T Consensus 154 MdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~------~ 227 (1317)
T KOG0612|consen 154 MDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMD------A 227 (1317)
T ss_pred EecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcC------C
Confidence 99999 6999999998899999999999999999999999999999999999999999999999999886542 2
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH-HHhcCCC-CCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-YRRGQYD-PSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-~~~~~~~-~~~~~ 260 (1553)
+......+..|||.|++||++...+.+ .+.|++.+|.||+|+++|||+.|..||..+.+.. |.+..-. ....+
T Consensus 228 dG~V~s~~aVGTPDYISPEvLqs~~~~-----~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~F 302 (1317)
T KOG0612|consen 228 DGTVRSSVAVGTPDYISPEVLQSQGDG-----KGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSF 302 (1317)
T ss_pred CCcEEeccccCCCCccCHHHHHhhcCC-----ccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCC
Confidence 334455678899999999999754432 4789999999999999999999977776555433 3221111 11112
Q ss_pred C--CCCCHHHHHHHHHhcccCcCCCCC---HHHHHHh
Q 000410 261 E--KIPDSGIRKMILHMIQLEPELRFS---AESYLQN 292 (1553)
Q Consensus 261 ~--~~~~~~l~~LI~~mL~~dP~~Rps---a~elL~~ 292 (1553)
| ...++++++||.+++. +|+.|.. ++++-.|
T Consensus 303 P~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 303 PDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred CcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 2 2357899999999996 6888997 9999998
No 183
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.98 E-value=2.1e-31 Score=308.59 Aligned_cols=245 Identities=15% Similarity=0.127 Sum_probs=195.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.+.||+|+||.||+|.+.+ +.||+|.+.... . ..+.+.+|..+++.++||||+++++++...+..|++|
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~--~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05068 7 SIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT--M----DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVT 80 (261)
T ss_pred heeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc--c----cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeee
Confidence 68999999999999999998755 569999885431 1 1344677888999999999999999999999999999
Q ss_pred cccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ ++|.+++.... .+++.++..++.|++.||.|||++||+||||||+||+++.++.++|+|||+++........
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~- 159 (261)
T cd05068 81 ELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYE- 159 (261)
T ss_pred ecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCccc-
Confidence 9996 79999997654 6899999999999999999999999999999999999999999999999998765311100
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHH---HhcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY---RRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~---~~~~~~~~ 257 (1553)
.......+..|+|||.+. ...++.++|||||||++|||++ |++||........ ....+..
T Consensus 160 -----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~- 223 (261)
T cd05068 160 -----AREGAKFPIKWTAPEAAL----------YNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRM- 223 (261)
T ss_pred -----ccCCCcCceeccCccccc----------cCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC-
Confidence 001111235699999653 3457889999999999999999 8999965433221 1222211
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
..+...+..+.+++.+||+.||++||+++++++.++
T Consensus 224 -~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~ 259 (261)
T cd05068 224 -PCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLE 259 (261)
T ss_pred -CCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHh
Confidence 123344678999999999999999999999998764
No 184
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.98 E-value=1.8e-31 Score=312.80 Aligned_cols=250 Identities=18% Similarity=0.151 Sum_probs=195.0
Q ss_pred cceEEEEEeeccCcEEEEEEEEC-------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD-------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD 97 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~-------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~ 97 (1553)
.+|++.+.||+|+||.||++... +..+++|.+... .......+.+|.++++.++||||+++++++...
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 79 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA-----SESARQDFQREAELLTVLQHQHIVRFYGVCTEG 79 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC-----CHHHHHHHHHHHHHHhcCCCCCCceEEEEEecC
Confidence 47899999999999999999742 245888887543 133445688888999999999999999999999
Q ss_pred CEEEEEecccc-CCHHHHhcCCC---------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTPP---------------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN 161 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~~---------------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~ 161 (1553)
...|++|||++ ++|.+++...+ .+++..+..++.||+.||+|||++||+||||||+|||+++++
T Consensus 80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~ 159 (280)
T cd05092 80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGL 159 (280)
T ss_pred CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCC
Confidence 99999999999 69999986532 478999999999999999999999999999999999999999
Q ss_pred cEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCC
Q 000410 162 WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPF 240 (1553)
Q Consensus 162 ~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~p 240 (1553)
.++|+|||++....... .........+++.|+|||.+. +..++.++|||||||++|||++ |.+|
T Consensus 160 ~~kL~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~el~~~g~~p 224 (280)
T cd05092 160 VVKIGDFGMSRDIYSTD-----YYRVGGRTMLPIRWMPPESIL----------YRKFTTESDIWSFGVVLWEIFTYGKQP 224 (280)
T ss_pred CEEECCCCceeEcCCCc-----eeecCCCccccccccCHHHhc----------cCCcCchhhHHHHHHHHHHHHcCCCCC
Confidence 99999999887542111 111112223457799999764 3457889999999999999998 7889
Q ss_pred CCchHHH-HHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 241 FELSHLL-AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 241 f~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
|...... .+...........+...++.+.++|.+||+.||++||+++++++.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 225 WYQLSNTEAIECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred CccCCHHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 8543222 12111111111223344678999999999999999999999998753
No 185
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.98 E-value=2.9e-31 Score=315.11 Aligned_cols=254 Identities=19% Similarity=0.216 Sum_probs=199.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++.+.. +.|++|.+.+.. .........+.+|+++++.++||||+++++.+..+...|+|
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~--~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 79 (305)
T cd05609 2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQN--LILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMV 79 (305)
T ss_pred CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhh--hhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEE
Confidence 68899999999999999999865 569999886541 12233445677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC--
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD-- 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~-- 180 (1553)
|||++ ++|.+++...+.+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||+++........
T Consensus 80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~ 159 (305)
T cd05609 80 MEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL 159 (305)
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccc
Confidence 99999 599999988778999999999999999999999999999999999999999999999999988642111100
Q ss_pred ------CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHh---
Q 000410 181 ------PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRR--- 251 (1553)
Q Consensus 181 ------~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~--- 251 (1553)
............++..|+|||.+. ...++.++|||||||++|||++|..||..........
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~ 229 (305)
T cd05609 160 YEGHIEKDTREFLDKQVCGTPEYIAPEVIL----------RQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVI 229 (305)
T ss_pred cccccccchhhccccCCccCccccCchhcc----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 000011111234677899999764 2357889999999999999999988886544333222
Q ss_pred -cCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCC---HHHHHHh
Q 000410 252 -GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFS---AESYLQN 292 (1553)
Q Consensus 252 -~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rps---a~elL~~ 292 (1553)
+... .+......+..++++|.+||+.||++||+ +.++++|
T Consensus 230 ~~~~~-~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 230 SDDIE-WPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred hcccC-CCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 2111 11122245678999999999999999998 6777776
No 186
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.98 E-value=6.2e-32 Score=324.89 Aligned_cols=250 Identities=18% Similarity=0.186 Sum_probs=192.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEe-
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQET- 96 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~- 96 (1553)
+|++.+.||.|+||.||+|...+ +.||+|++.... . ....+.+..|..+++.+ +||||+++++++..
T Consensus 8 ~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~---~-~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~ 83 (337)
T cd05054 8 RLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA---T-ASEYKALMTELKILIHIGHHLNVVNLLGACTKP 83 (337)
T ss_pred HhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC---C-HHHHHHHHHHHHHHHhhccCcchhheeeeEecC
Confidence 78999999999999999997532 469999885431 1 22334566778889888 79999999998754
Q ss_pred CCEEEEEecccc-CCHHHHhcCC---------------------------------------------------------
Q 000410 97 DKAAYLLRQYFF-NSLRDRLSTP--------------------------------------------------------- 118 (1553)
Q Consensus 97 ~~~~~lV~E~~~-gsL~d~l~~~--------------------------------------------------------- 118 (1553)
+...|++|||++ ++|.+++...
T Consensus 84 ~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
T cd05054 84 GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGD 163 (337)
T ss_pred CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhh
Confidence 467899999999 5999988532
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceeeecCCCC
Q 000410 119 ----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKR 194 (1553)
Q Consensus 119 ----~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt 194 (1553)
..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||+++....... ........++
T Consensus 164 ~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~-----~~~~~~~~~~ 238 (337)
T cd05054 164 ELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YVRKGDARLP 238 (337)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcc-----hhhccCCCCC
Confidence 1478899999999999999999999999999999999999999999999999876522110 0111233445
Q ss_pred ccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchH----HHHHHhcCCCCCCCCCCCCCHHHH
Q 000410 195 LCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH----LLAYRRGQYDPSQHLEKIPDSGIR 269 (1553)
Q Consensus 195 ~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~----~~~~~~~~~~~~~~~~~~~~~~l~ 269 (1553)
..|+|||.+. +..++.++|||||||++|||++ |.+||.... ......... ....+...++.+.
T Consensus 239 ~~y~aPE~~~----------~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 306 (337)
T cd05054 239 LKWMAPESIF----------DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGT--RMRAPEYATPEIY 306 (337)
T ss_pred ccccCcHHhc----------CCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccC--CCCCCccCCHHHH
Confidence 6799999764 3468899999999999999997 899986422 111111111 1122334567899
Q ss_pred HHHHHhcccCcCCCCCHHHHHHhhhcc
Q 000410 270 KMILHMIQLEPELRFSAESYLQNYAAV 296 (1553)
Q Consensus 270 ~LI~~mL~~dP~~Rpsa~elL~~~~~~ 296 (1553)
+++.+||+.+|++||+++|+++++...
T Consensus 307 ~l~~~cl~~~p~~RPs~~ell~~l~~~ 333 (337)
T cd05054 307 SIMLDCWHNNPEDRPTFSELVEILGDL 333 (337)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 999999999999999999999997643
No 187
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.98 E-value=2.5e-31 Score=316.01 Aligned_cols=244 Identities=14% Similarity=0.113 Sum_probs=196.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++.+.. ..+++|.+... ........+.+|+++++.++||||+++++++.+++..|+|
T Consensus 2 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 77 (308)
T cd06615 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLE----IKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISIC 77 (308)
T ss_pred CceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccc----cCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEE
Confidence 68999999999999999999864 45888887543 1234556678899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||++ ++|.+++...+.+++..+..++.|++.||.|||+ +|++||||||+|||++.++.++|+|||++......
T Consensus 78 ~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~---- 153 (308)
T cd06615 78 MEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 153 (308)
T ss_pred eeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCccccccc----
Confidence 99998 5999999887789999999999999999999997 69999999999999999999999999987643211
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHh---cCCC---
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRR---GQYD--- 255 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~---~~~~--- 255 (1553)
......++..|+|||.+. +..++.++|+|||||++|+|++|.+||...+...... ....
T Consensus 154 -----~~~~~~~~~~~~aPE~~~----------~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 218 (308)
T cd06615 154 -----MANSFVGTRSYMSPERLQ----------GTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGE 218 (308)
T ss_pred -----ccccCCCCcCccChhHhc----------CCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCcccccc
Confidence 112345678899999763 3357889999999999999999998886433222111 0000
Q ss_pred -------------------------------CCCCC-CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 256 -------------------------------PSQHL-EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 256 -------------------------------~~~~~-~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+.. ....+.+++++|.+||..||++||+++++++|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 219 AKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred ccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00001 11245679999999999999999999999998
No 188
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.98 E-value=1.1e-31 Score=318.16 Aligned_cols=248 Identities=15% Similarity=0.110 Sum_probs=192.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--c--eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--G--LVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~--~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~ 100 (1553)
+|++.+.||+|+||.||+|.+.. . .+++|.+... ........+.+|++++..+ +||||+++++++..++..
T Consensus 8 ~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~----~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~ 83 (303)
T cd05088 8 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY----ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYL 83 (303)
T ss_pred hceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc----CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCc
Confidence 78999999999999999998753 2 2566665422 1234456677888899999 899999999999999999
Q ss_pred EEEecccc-CCHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcE
Q 000410 101 YLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWL 163 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~v 163 (1553)
|+||||++ ++|.+++... +.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVA 163 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcE
Confidence 99999998 6999998643 257899999999999999999999999999999999999999999
Q ss_pred EEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCC
Q 000410 164 YLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFE 242 (1553)
Q Consensus 164 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~ 242 (1553)
||+|||+++....... ......+..|+|||.+. ...++.++|||||||++|||++ |.+||.
T Consensus 164 kl~dfg~~~~~~~~~~--------~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~ellt~g~~p~~ 225 (303)
T cd05088 164 KIADFGLSRGQEVYVK--------KTMGRLPVRWMAIESLN----------YSVYTTNSDVWSYGVLLWEIVSLGGTPYC 225 (303)
T ss_pred EeCccccCcccchhhh--------cccCCCcccccCHHHHh----------ccCCcccccchhhhhHHHHHHhcCCCCcc
Confidence 9999998763211000 01112345699999764 3357889999999999999998 888986
Q ss_pred chHHHHHHhcC-CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 243 LSHLLAYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 243 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
........... .......+...++.+.+||.+||+.+|++||+++++++++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~ 279 (303)
T cd05088 226 GMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 279 (303)
T ss_pred cCChHHHHHHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 44333222111 111111223345789999999999999999999999998653
No 189
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.98 E-value=1.1e-31 Score=310.06 Aligned_cols=246 Identities=16% Similarity=0.125 Sum_probs=194.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.+.||+|+||.||++++.. +.+|+|++.+... . ...+.+|.++++.++||||+++++++......|+||
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~--~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 78 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM--S----EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVT 78 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC--C----HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEE
Confidence 68899999999999999998865 4699999854311 1 234566778999999999999999999999999999
Q ss_pred cccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||++ ++|.+++..+ ..+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||.++........
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-- 156 (256)
T cd05059 79 EYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-- 156 (256)
T ss_pred ecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceeccccccc--
Confidence 9998 5999999653 46899999999999999999999999999999999999999999999999988754211100
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHH-hcCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYR-RGQYDPSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~-~~~~~~~~~~ 260 (1553)
......++..|+|||.+. ...++.++|||||||++|+|++ |.+||......... ..........
T Consensus 157 ----~~~~~~~~~~y~~Pe~~~----------~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 222 (256)
T cd05059 157 ----SSQGTKFPVKWAPPEVFD----------YSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRLYR 222 (256)
T ss_pred ----ccCCCCCCccccCHHHhc----------cCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcCCC
Confidence 001112345699999764 3457889999999999999999 69998643322221 1111112223
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+...+..+.+++.+||..+|++||++.++++.+
T Consensus 223 ~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 223 PKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 445678999999999999999999999999864
No 190
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.98 E-value=1.6e-31 Score=315.65 Aligned_cols=250 Identities=16% Similarity=0.140 Sum_probs=197.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC------------------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE------------------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHV 87 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~------------------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnI 87 (1553)
+|++.+.||+|+||.||+|.+.+ ..||+|++.... .......+.+|+++++.++||||
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~~e~~~l~~l~~~~i 81 (296)
T cd05051 6 PLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA----SDNAREDFLKEVKILSRLSDPNI 81 (296)
T ss_pred hCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc----CHHHHHHHHHHHHHHHhcCCCCE
Confidence 78999999999999999998753 348999886542 12445678888899999999999
Q ss_pred eEEEEEEEeCCEEEEEecccc-CCHHHHhcCCC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcE
Q 000410 88 WAFQFWQETDKAAYLLRQYFF-NSLRDRLSTPP-----------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 155 (1553)
Q Consensus 88 v~~~~~~~~~~~~~lV~E~~~-gsL~d~l~~~~-----------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NI 155 (1553)
+++++++..+...+++|||+. ++|.+++.... .+++..+..++.|++.||.|||++||+||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Ni 161 (296)
T cd05051 82 ARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNC 161 (296)
T ss_pred eEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhce
Confidence 999999999999999999998 69999987654 689999999999999999999999999999999999
Q ss_pred EEecCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHH
Q 000410 156 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 235 (1553)
Q Consensus 156 Lv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 235 (1553)
+++.++.++|+|||.++...... .........+++.|+|||.+. ...++.++|||||||++|||+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~~l~el~ 226 (296)
T cd05051 162 LVGKNYTIKIADFGMSRNLYSSD-----YYRVQGRAPLPIRWMAWESVL----------LGKFTTKSDVWAFGVTLWEIL 226 (296)
T ss_pred eecCCCceEEccccceeecccCc-----ceeecCcCCCCceecCHHHhh----------cCCCCccchhhhhHHHHHHHH
Confidence 99999999999999887543221 111222334567899999764 335788999999999999999
Q ss_pred c--CCCCCCchHHHHH-H--hcC-----CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 236 L--EVPFFELSHLLAY-R--RGQ-----YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 236 t--g~~pf~~~~~~~~-~--~~~-----~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+ +.+||........ . ... .......+...+.++.++|.+||+.||++||++.|+++.+.
T Consensus 227 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 227 TLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred hcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 8 5778764322211 1 111 11111122344578999999999999999999999998754
No 191
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.98 E-value=1.7e-31 Score=308.66 Aligned_cols=242 Identities=15% Similarity=0.118 Sum_probs=191.1
Q ss_pred EeeccCcEEEEEEEEC----CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 32 VLGGSRFFKSILCKHD----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 32 ~LG~G~fg~V~~a~~~----~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
.||+|+||.||+|.+. +..+|+|++.... ......+.+.+|+.+++.++||||++++++++. ...++||||+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~ 77 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDN---NDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELA 77 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCC---CcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecC
Confidence 6899999999999653 3569999985442 223455678888899999999999999998764 4678999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ |+|.+++.....+++..+..++.|++.||+|||++||+||||||.|||++.++.++|+|||.+........ ...
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~----~~~ 153 (257)
T cd05116 78 ELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADEN----YYK 153 (257)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCC----eee
Confidence 9 69999998777799999999999999999999999999999999999999999999999999876532211 000
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHH---H-HHhcCCCCCCCCC
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLL---A-YRRGQYDPSQHLE 261 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~---~-~~~~~~~~~~~~~ 261 (1553)
......++..|+|||.+. ...++.++|||||||++|||++ |.+||...... . +..+. ....+
T Consensus 154 ~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~---~~~~~ 220 (257)
T cd05116 154 AKTHGKWPVKWYAPECMN----------YYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGE---RMECP 220 (257)
T ss_pred ecCCCCCCccccCHhHhc----------cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCC---CCCCC
Confidence 111223356799999763 3357789999999999999998 89999643322 2 22222 12244
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
...++++.++|.+||+.||++||+++++.+.+.
T Consensus 221 ~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~ 253 (257)
T cd05116 221 QRCPPEMYDLMKLCWTYGVDERPGFAVVELRLR 253 (257)
T ss_pred CCCCHHHHHHHHHHhccCchhCcCHHHHHHHHh
Confidence 455688999999999999999999999998865
No 192
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.98 E-value=2e-31 Score=308.73 Aligned_cols=245 Identities=14% Similarity=0.096 Sum_probs=194.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.++||+|+||.||+|...+ ..|++|.+.... ...+.+.+|..+++.++||||+++++.+...+..|++|
T Consensus 7 ~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 80 (261)
T cd05072 7 SIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT------MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIIT 80 (261)
T ss_pred HeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc------hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEE
Confidence 79999999999999999998765 569999875431 12356778889999999999999999999999999999
Q ss_pred cccc-CCHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ ++|.+++.. ...+++.++..++.|++.||+|||++|++||||||+||+++.++.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~--- 157 (261)
T cd05072 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE--- 157 (261)
T ss_pred ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCc---
Confidence 9998 699999865 3458889999999999999999999999999999999999999999999999987542111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHH---HhcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY---RRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~---~~~~~~~~ 257 (1553)
........++..|+|||.+. ...++.++|||||||++|+|++ |.+||........ .......
T Consensus 158 ---~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~- 223 (261)
T cd05072 158 ---YTAREGAKFPIKWTAPEAIN----------FGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYRM- 223 (261)
T ss_pred ---eeccCCCccceecCCHHHhc----------cCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC-
Confidence 00111223456799999764 3457889999999999999998 8999964332221 1222211
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+ .....+..+.+++.+||..||++||+++++++.++
T Consensus 224 ~-~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 259 (261)
T cd05072 224 P-RMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLD 259 (261)
T ss_pred C-CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 1 22234578999999999999999999999988754
No 193
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.98 E-value=1.6e-31 Score=316.05 Aligned_cols=251 Identities=18% Similarity=0.236 Sum_probs=198.1
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||+|.+. +..|++|.+...............+..|.++++.++||||+++++++.+....|+|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4788899999999999999985 36799999976533222234455667788899999999999999999999999999
Q ss_pred eccccCCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+.++|.+++.... .+++.++..++.||++||.|||++||+||||||+|||++.++.++|+|||+++........
T Consensus 81 ~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~-- 158 (298)
T cd07841 81 FEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRK-- 158 (298)
T ss_pred EcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCcc--
Confidence 9999889999998765 7999999999999999999999999999999999999999999999999998765332211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCC--
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDP-- 256 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~-- 256 (1553)
.....+++.|+|||.+.+ ...++.++||||+||++|||++|.++|....... .......+
T Consensus 159 -----~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (298)
T cd07841 159 -----MTHQVVTRWYRAPELLFG---------ARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTE 224 (298)
T ss_pred -----ccccccceeeeCHHHHhC---------CCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCch
Confidence 112234677999997742 2356889999999999999999988886433211 11000000
Q ss_pred ----------------------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 ----------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ----------------------~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
........+..+.++|.+||+.||++|||+.|+++|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 225 ENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred hhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000112235678999999999999999999999998
No 194
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.98 E-value=5.7e-33 Score=315.50 Aligned_cols=252 Identities=23% Similarity=0.255 Sum_probs=208.4
Q ss_pred cCCCccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC
Q 000410 20 DLPSSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD 97 (1553)
Q Consensus 20 ~l~~~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~ 97 (1553)
|+..-|++--.+.||+|.||+||-|+|+. +.||||++.|-.-+. ..+..++.|+.||+.+.||.||.+...|++.
T Consensus 559 d~stvYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~---kqesqlR~EVaILq~l~HPGiV~le~M~ET~ 635 (888)
T KOG4236|consen 559 DISTVYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPT---KQESQLRNEVAILQNLHHPGIVNLECMFETP 635 (888)
T ss_pred hHHHHHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCC---chHHHHHHHHHHHHhcCCCCeeEEEEeecCC
Confidence 44555555567899999999999999864 669999998863322 2236789999999999999999999999999
Q ss_pred CEEEEEeccccCCHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC---cEEEeecCccc
Q 000410 98 KAAYLLRQYFFNSLRDRL--STPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN---WLYLSDFASFK 172 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l--~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~---~vkL~DFG~a~ 172 (1553)
+.+++|||-+.|+..+.| ++.++|++...+.++.||+.||.|||-+||+|+||||||||+.+.. .+||||||+|+
T Consensus 636 ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfAR 715 (888)
T KOG4236|consen 636 ERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFAR 715 (888)
T ss_pred ceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeecccccee
Confidence 999999999999988887 3467899999999999999999999999999999999999998653 79999999999
Q ss_pred cccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-H-HHHH
Q 000410 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-L-LAYR 250 (1553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~-~~~~ 250 (1553)
.+.. ..+..+..|||.|+|||++. ...|+..-|+||+|+|+|--+.|..||+.+. + .++.
T Consensus 716 iIgE--------ksFRrsVVGTPAYLaPEVLr----------nkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIndQIQ 777 (888)
T KOG4236|consen 716 IIGE--------KSFRRSVVGTPAYLAPEVLR----------NKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDINDQIQ 777 (888)
T ss_pred ecch--------hhhhhhhcCCccccCHHHHh----------hccccccccceeeeEEEEEEecccccCCCccchhHHhh
Confidence 7621 22446778999999999876 3457788999999999999999999997543 2 3344
Q ss_pred hcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 251 RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 251 ~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+-.++...+..+++..+||..+|+..-.+|+|.+..|.|
T Consensus 778 NAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 778 NAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred ccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 444443333333445689999999999999999999999998
No 195
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.98 E-value=3.1e-31 Score=307.99 Aligned_cols=252 Identities=20% Similarity=0.212 Sum_probs=198.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--CEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD--KAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~--~~~~ 101 (1553)
+|++.+.||+|+||.||++.+.+ ..|++|.+.............+.+.+|+.+++.+.||||+++++++.+. ...|
T Consensus 3 ~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (265)
T cd06652 3 NWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTLS 82 (265)
T ss_pred cceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceEE
Confidence 68999999999999999998854 5699998865432223334456788888999999999999999988653 5688
Q ss_pred EEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
++|||++ ++|.+++...+.+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||.+.........
T Consensus 83 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~ 162 (265)
T cd06652 83 IFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLS 162 (265)
T ss_pred EEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCcccccccccccc
Confidence 9999998 599999987777899999999999999999999999999999999999999999999999988754321111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHHhcCCC-CCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRRGQYD-PSQ 258 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~~~~~-~~~ 258 (1553)
... .....++..|+|||.+. +..++.++|||||||++|||++|++||.... ...+...... ..+
T Consensus 163 ~~~----~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 228 (265)
T cd06652 163 GTG----MKSVTGTPYWMSPEVIS----------GEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTNP 228 (265)
T ss_pred ccc----cccCCCCccccChhhhc----------CCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCCCC
Confidence 111 12234678899999764 2356889999999999999999999986432 2222222222 122
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+...+..+.++|.+|+. +|++||+++++++|
T Consensus 229 ~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 229 VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 3444456789999999995 99999999999988
No 196
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.98 E-value=2.4e-31 Score=340.61 Aligned_cols=257 Identities=15% Similarity=0.171 Sum_probs=196.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+.. +.||+|++.... ...+...+++.+|+++++.++||||+++++++.+++..|++
T Consensus 3 rYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l--~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLV 80 (932)
T PRK13184 3 RYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDL--SENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYT 80 (932)
T ss_pred CeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECccc--ccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEE
Confidence 79999999999999999999863 679999986532 22344566788899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC-----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcc
Q 000410 104 RQYFF-NSLRDRLSTP-----------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASF 171 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~-----------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a 171 (1553)
|||++ |+|.+++... ..++...+..++.||+.||+|||++||+||||||+|||++.+|.++|+|||++
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLA 160 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAA 160 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcc
Confidence 99999 5999988531 23556778899999999999999999999999999999999999999999998
Q ss_pred ccccCCCCCCCCc-----------ceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCC
Q 000410 172 KPTYIPYDDPSDF-----------SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPF 240 (1553)
Q Consensus 172 ~~~~~~~~~~~~~-----------~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~p 240 (1553)
+......+..... ........||+.|+|||++. +..++.++||||+||++|||++|.+|
T Consensus 161 k~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~----------g~~~S~kSDIWSLGVILyELLTG~~P 230 (932)
T PRK13184 161 IFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLL----------GVPASESTDIYALGVILYQMLTLSFP 230 (932)
T ss_pred eecccccccccccccccccccccccccCCCCCCCCCCCCHHHhc----------CCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence 7652211111000 00112345899999999764 34678899999999999999999999
Q ss_pred CCchHHHHHHhc--CCCCCCC-CCCCCCHHHHHHHHHhcccCcCCCCCH-HHHHHhhh
Q 000410 241 FELSHLLAYRRG--QYDPSQH-LEKIPDSGIRKMILHMIQLEPELRFSA-ESYLQNYA 294 (1553)
Q Consensus 241 f~~~~~~~~~~~--~~~~~~~-~~~~~~~~l~~LI~~mL~~dP~~Rpsa-~elL~~~~ 294 (1553)
|........... ...+... .....++.+.+++.+||+.||++||+. +++++.+.
T Consensus 231 F~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le 288 (932)
T PRK13184 231 YRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLE 288 (932)
T ss_pred CCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 975443322111 1111111 112335689999999999999999865 44544443
No 197
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.98 E-value=1.9e-31 Score=316.48 Aligned_cols=252 Identities=16% Similarity=0.157 Sum_probs=196.5
Q ss_pred cceEEEEEeeccCcEEEEEEEEC---------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD---------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQ 94 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~---------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~ 94 (1553)
.+|.+.+.||+|+||.||+|++. ...||+|++.... .....+.+.+|+.+++.+ +||||+++++++
T Consensus 15 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~ 90 (304)
T cd05101 15 DKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDA----TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC 90 (304)
T ss_pred HHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeeccccc----chHHHHHHHHHHHHHHhhccCCCchheeEEE
Confidence 38999999999999999999752 1358999875431 123345677888899998 799999999999
Q ss_pred EeCCEEEEEecccc-CCHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEE
Q 000410 95 ETDKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV 157 (1553)
Q Consensus 95 ~~~~~~~lV~E~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv 157 (1553)
......|++|||+. |+|.+++..+ ..++..++..++.||+.||.|||++||+||||||+|||+
T Consensus 91 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili 170 (304)
T cd05101 91 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLV 170 (304)
T ss_pred ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEE
Confidence 99999999999999 6999998653 247788899999999999999999999999999999999
Q ss_pred ecCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-
Q 000410 158 TSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL- 236 (1553)
Q Consensus 158 ~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt- 236 (1553)
+.++.+||+|||.++....... ........+++.|+|||.+. +..++.++|||||||++|+|++
T Consensus 171 ~~~~~~kl~D~g~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~ 235 (304)
T cd05101 171 TENNVMKIADFGLARDVNNIDY-----YKKTTNGRLPVKWMAPEALF----------DRVYTHQSDVWSFGVLMWEIFTL 235 (304)
T ss_pred cCCCcEEECCCccceecccccc-----cccccCCCCCceeeCchhhc----------cCCCCchhhHHHHHHHHHHHHcC
Confidence 9999999999999875522111 11112233456799999764 3457889999999999999998
Q ss_pred CCCCCCchHHHHHHhcCCC-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 237 EVPFFELSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 237 g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
|.+||.............. .....+...+..+++||.+||..+|++||++.|+++.++.
T Consensus 236 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~ 295 (304)
T cd05101 236 GGSPYPGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDR 295 (304)
T ss_pred CCCCcccCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 6888875544333221111 1112233456789999999999999999999999998654
No 198
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.98 E-value=2.2e-31 Score=311.88 Aligned_cols=249 Identities=14% Similarity=0.111 Sum_probs=192.7
Q ss_pred cceEEEEEeeccCcEEEEEEEEC--Cc----eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD--EG----LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~--~~----~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
.+|++.+.||.|+||.||+|... +. .+++|.+... .......++..|..+++.+.||||+++++++.. .
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~ 81 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR----SGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-A 81 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc----cchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-C
Confidence 37889999999999999999874 23 2566665322 223334566677778899999999999998754 4
Q ss_pred EEEEEecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccC
Q 000410 99 AAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~ 176 (1553)
..++++||++ |+|.+++.. .+.+++..+..|+.||+.||.|||++|++||||||+|||++.++.+||+|||.++....
T Consensus 82 ~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 82 SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 5788999998 799999975 45689999999999999999999999999999999999999999999999999875421
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH---HHhc
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA---YRRG 252 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~---~~~~ 252 (1553)
. ..........++..|+|||.+. ...++.++|||||||++|||++ |.+||....... ....
T Consensus 162 ~-----~~~~~~~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~ 226 (279)
T cd05111 162 D-----DKKYFYSEHKTPIKWMALESIL----------FGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEK 226 (279)
T ss_pred C-----CcccccCCCCCcccccCHHHhc----------cCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHC
Confidence 1 1112223445667899999764 3467899999999999999998 898986543322 2221
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 253 QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 253 ~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
.. ....+...+..+.+++.+||..||++||++.|+++.+..
T Consensus 227 ~~--~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~ 267 (279)
T cd05111 227 GE--RLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTR 267 (279)
T ss_pred CC--cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 11 112233456789999999999999999999999998754
No 199
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.98 E-value=4e-31 Score=315.52 Aligned_cols=255 Identities=22% Similarity=0.229 Sum_probs=199.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+.+ ..||+|.+.+.. .......+.+..|.++++.++||||+++++.+......|+|
T Consensus 2 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 79 (316)
T cd05574 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKE--MIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLV 79 (316)
T ss_pred ceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccc--cchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEE
Confidence 68999999999999999999864 679999997652 12223456688888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||+. ++|.+++... ..+++..++.++.|++.||+|||++|++||||||+||+++.++.++|+|||++.........
T Consensus 80 ~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (316)
T cd05574 80 MDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPP 159 (316)
T ss_pred EEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccc
Confidence 99998 5999998754 46899999999999999999999999999999999999999999999999987654221110
Q ss_pred CCC----------------------cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCC
Q 000410 181 PSD----------------------FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV 238 (1553)
Q Consensus 181 ~~~----------------------~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~ 238 (1553)
... .........|+..|+|||.+. +..++.++|||||||++|+|++|.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~----------~~~~~~~~Di~slG~ll~~l~~g~ 229 (316)
T cd05574 160 VSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVIS----------GDGHGSAVDWWTLGILLYEMLYGT 229 (316)
T ss_pred cccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHc----------CCCCCchHHHHHHHHHHHHHhhCC
Confidence 000 000111234678899999764 335688999999999999999999
Q ss_pred CCCCchHHHHHHhcCCCCCCCCCC--CCCHHHHHHHHHhcccCcCCCCC----HHHHHHh
Q 000410 239 PFFELSHLLAYRRGQYDPSQHLEK--IPDSGIRKMILHMIQLEPELRFS----AESYLQN 292 (1553)
Q Consensus 239 ~pf~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~LI~~mL~~dP~~Rps----a~elL~~ 292 (1553)
.||...+..............++. ..++.++++|.+||+.||++||+ ++|+++|
T Consensus 230 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~ 289 (316)
T cd05574 230 TPFKGSNRDETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQH 289 (316)
T ss_pred CCCCCCchHHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcC
Confidence 999654432211111111111111 24678999999999999999999 9999988
No 200
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.98 E-value=4.3e-31 Score=309.40 Aligned_cols=240 Identities=18% Similarity=0.139 Sum_probs=191.0
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+. ++.||+|++.+.. .......+.+|.++++.++||||+++++.+..++..++|
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 77 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI----TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISIC 77 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC----ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEE
Confidence 5788899999999999999885 3669999986541 233445678888999999999999999999999999999
Q ss_pred eccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+++ +|..+ ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++.......
T Consensus 78 ~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~---- 149 (279)
T cd06619 78 TEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI---- 149 (279)
T ss_pred EecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc----
Confidence 999995 66544 236888999999999999999999999999999999999999999999999987542111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-------HHHHhcC--
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-------LAYRRGQ-- 253 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-------~~~~~~~-- 253 (1553)
.....++..|+|||.+. +..++.++|+|||||++|+|++|..||..... .......
T Consensus 150 -----~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 214 (279)
T cd06619 150 -----AKTYVGTNAYMAPERIS----------GEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVD 214 (279)
T ss_pred -----ccCCCCChhhcCceeec----------CCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhc
Confidence 12235678899999764 34578899999999999999999988853210 1111111
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...........++.++++|.+||+.||++||+++++++|
T Consensus 215 ~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 215 EDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred cCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 111111223356789999999999999999999999988
No 201
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.98 E-value=3.9e-31 Score=310.70 Aligned_cols=246 Identities=17% Similarity=0.195 Sum_probs=195.2
Q ss_pred eEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|+..+.||+|+||+||++.+. ++.||+|++.+... ........+.+|+++++.++|+||+++++.+..++..|++|
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~ 79 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRI--KKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVL 79 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhh--hhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEE
Confidence 678899999999999999986 36799999865411 11223345667889999999999999999999999999999
Q ss_pred cccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||+. ++|.+++... ..+++..+..++.|++.||.|||++||+||||||+||++++++.++|+|||++.......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~--- 156 (285)
T cd05632 80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE--- 156 (285)
T ss_pred EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCC---
Confidence 9999 5898887543 359999999999999999999999999999999999999999999999999886431110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HHHHhcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~~~~~~~~~~ 257 (1553)
......|+..|+|||.+. +..++.++|+||+||++|+|++|.+||..... ...........
T Consensus 157 -----~~~~~~g~~~~~aPE~~~----------~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~ 221 (285)
T cd05632 157 -----SIRGRVGTVGYMAPEVLN----------NQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETE 221 (285)
T ss_pred -----cccCCCCCcCccChHHhc----------CCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccc
Confidence 112345788999999764 34578899999999999999999999965322 12222222222
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 292 (1553)
.......++.+.+|+.+||+.||++||+ ++++++|
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 222 EVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred cccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 2334445678999999999999999999 7788877
No 202
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.98 E-value=1.2e-31 Score=310.01 Aligned_cols=247 Identities=18% Similarity=0.243 Sum_probs=202.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||+|++. +..|++|++.+... ......+.+.+|.+++++++||||++++++++++...|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 78 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKC--VEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLV 78 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhh--cchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEE
Confidence 4889999999999999999986 46799999976421 1223456788888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||+. ++|.+++.....+++.++..++.||++||.|||++|++|+||||+||++++++.++|+|||.+.......
T Consensus 79 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---- 154 (258)
T cd05578 79 VDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT---- 154 (258)
T ss_pred EeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc----
Confidence 99998 5999999887779999999999999999999999999999999999999999999999999876542211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH---HHHHHhcCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH---LLAYRRGQYDPSQH 259 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~---~~~~~~~~~~~~~~ 259 (1553)
......++..|+|||.+. ...++.++|+||+||++|+|++|..||.... ...+..........
T Consensus 155 ----~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 220 (258)
T cd05578 155 ----LTTSTSGTPGYMAPEVLC----------RQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVL 220 (258)
T ss_pred ----cccccCCChhhcCHHHHc----------ccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcccccc
Confidence 112334677899999764 2347889999999999999999999987543 23332222213333
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCH--HHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSA--ESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa--~elL~~ 292 (1553)
.+...+..+.++|.+||+.||.+||++ .|+++|
T Consensus 221 ~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~ 255 (258)
T cd05578 221 YPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNH 255 (258)
T ss_pred CcccCcHHHHHHHHHHccCChhHcCCccHHHHhcC
Confidence 444556799999999999999999999 888876
No 203
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.98 E-value=3.3e-32 Score=332.99 Aligned_cols=256 Identities=20% Similarity=0.233 Sum_probs=206.9
Q ss_pred cccccCCCccceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCee
Q 000410 16 YYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVW 88 (1553)
Q Consensus 16 ~~~~~l~~~~~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv 88 (1553)
.+..+++.. +.++.+.||+|+||+||+|+..+ ..||||.++.. ...+..++|++|++++..++|||||
T Consensus 478 ~~~~~i~r~-~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~----a~~~~~~dF~REaeLla~l~H~nIV 552 (774)
T KOG1026|consen 478 LKVLEIPRS-DIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK----AENQARQDFRREAELLAELQHPNIV 552 (774)
T ss_pred cceeEechh-heeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc----ccHHHHHHHHHHHHHHHhccCCCeE
Confidence 344455543 78899999999999999998754 34999999654 3355778899999999999999999
Q ss_pred EEEEEEEeCCEEEEEecccc-CCHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 000410 89 AFQFWQETDKAAYLLRQYFF-NSLRDRLSTP--------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 153 (1553)
Q Consensus 89 ~~~~~~~~~~~~~lV~E~~~-gsL~d~l~~~--------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~ 153 (1553)
++++++..++..|||+|||. |||.++|..+ +.|+..+.+.|+.||+.|+.||-++.+|||||-..
T Consensus 553 rLlGVC~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATR 632 (774)
T KOG1026|consen 553 RLLGVCREGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATR 632 (774)
T ss_pred EEEEEEccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhh
Confidence 99999999999999999999 9999999432 34889999999999999999999999999999999
Q ss_pred cEEEecCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHH
Q 000410 154 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 233 (1553)
Q Consensus 154 NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~e 233 (1553)
|+||.+.-.|||+|||+++..|..+ +...-....-...|||||-+. .++++.++||||+||+|||
T Consensus 633 NCLVge~l~VKIsDfGLsRdiYssD-----YYk~~~~t~lPIRWMppEsIl----------y~kFTteSDVWs~GVvLWE 697 (774)
T KOG1026|consen 633 NCLVGENLVVKISDFGLSRDIYSSD-----YYKVRGNTLLPIRWMPPESIL----------YGKFTTESDVWSFGVVLWE 697 (774)
T ss_pred hceeccceEEEecccccchhhhhhh-----hhcccCCceeeeecCCHHHhh----------cCcccchhhhhhhhhhhhh
Confidence 9999999999999999999876432 111111222246799999765 5689999999999999999
Q ss_pred HHc-CCCCC-CchHHH---HHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 234 LFL-EVPFF-ELSHLL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 234 Llt-g~~pf-~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+|+ |..|| ..++.+ .++++.. ..-+...+.++.+|+..||+.+|.+||++.||-..++
T Consensus 698 IFsyG~QPy~glSn~EVIe~i~~g~l---L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~ 760 (774)
T KOG1026|consen 698 IFSYGKQPYYGLSNQEVIECIRAGQL---LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQ 760 (774)
T ss_pred hhccccCcccccchHHHHHHHHcCCc---ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHH
Confidence 998 56555 444332 2334443 2245556689999999999999999999999876654
No 204
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.98 E-value=3.2e-31 Score=316.05 Aligned_cols=249 Identities=18% Similarity=0.164 Sum_probs=194.4
Q ss_pred ceEEEEEeeccCcEEEEEEEEC---------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD---------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQE 95 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~---------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~ 95 (1553)
+|++.+.||+|+||.||+|++. ...+|+|++.... . ......+..|+.+++.+ +||||+++++++.
T Consensus 13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~---~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (314)
T cd05099 13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA---T-DKDLADLISEMELMKLIGKHKNIINLLGVCT 88 (314)
T ss_pred HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC---C-hHHHHHHHHHHHHHHhccCCCCeeeEEEEEc
Confidence 7999999999999999999763 2358999876432 1 22344567788889888 6999999999999
Q ss_pred eCCEEEEEecccc-CCHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEe
Q 000410 96 TDKAAYLLRQYFF-NSLRDRLSTP----------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 158 (1553)
Q Consensus 96 ~~~~~~lV~E~~~-gsL~d~l~~~----------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~ 158 (1553)
.+...|++|||+. |+|.+++... ..+++.++..++.||+.||.|||++||+||||||+|||++
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~ 168 (314)
T cd05099 89 QEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVT 168 (314)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEc
Confidence 9999999999999 6999999653 3488899999999999999999999999999999999999
Q ss_pred cCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-C
Q 000410 159 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 237 (1553)
Q Consensus 159 ~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 237 (1553)
.++.+||+|||.++....... ........++..|+|||.+. ...++.++|||||||++|||++ |
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslG~~l~el~~~g 233 (314)
T cd05099 169 EDNVMKIADFGLARGVHDIDY-----YKKTSNGRLPVKWMAPEALF----------DRVYTHQSDVWSFGILMWEIFTLG 233 (314)
T ss_pred CCCcEEEcccccccccccccc-----ccccccCCCCccccCHHHHc----------cCCcCccchhhHHHHHHHHHHhCC
Confidence 999999999999875421110 00011122345799999764 3457889999999999999999 7
Q ss_pred CCCCCchHHHH---HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 238 VPFFELSHLLA---YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 238 ~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
..||....... ....... ...+...+..++++|.+||..||++||++.++++.+..
T Consensus 234 ~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~ 292 (314)
T cd05099 234 GSPYPGIPVEELFKLLREGHR--MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDK 292 (314)
T ss_pred CCCCCCCCHHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHH
Confidence 88887543322 2222111 12233445689999999999999999999999998654
No 205
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.98 E-value=4.9e-31 Score=288.93 Aligned_cols=307 Identities=19% Similarity=0.260 Sum_probs=262.5
Q ss_pred CCCcccCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcE
Q 000410 1122 DSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1201 (1553)
Q Consensus 1122 ~~~W~p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~ 1201 (1553)
+..|-|+-.++..+.+|+.+|+.+-|+|+-..+++||+|+++|+||..+++ ....+.+|...+.++.|...|..
T Consensus 91 ~~~wipRp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~------~e~~LrGHt~sv~di~~~a~Gk~ 164 (406)
T KOG0295|consen 91 PALWIPRPNLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGE------LERSLRGHTDSVFDISFDASGKY 164 (406)
T ss_pred hhhcCCCCCchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchh------hhhhhhccccceeEEEEecCccE
Confidence 567999989999999999999999999999999999999999999999887 34567789988999999999999
Q ss_pred EEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCccc
Q 000410 1202 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1281 (1553)
Q Consensus 1202 las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~ 1281 (1553)
+|+|+.|-.+++||.+.. ..+++...+|...|.++.|-|. |.++++++.|.+|+.||+.++-++
T Consensus 165 l~tcSsDl~~~LWd~~~~-------------~~c~ks~~gh~h~vS~V~f~P~---gd~ilS~srD~tik~We~~tg~cv 228 (406)
T KOG0295|consen 165 LATCSSDLSAKLWDFDTF-------------FRCIKSLIGHEHGVSSVFFLPL---GDHILSCSRDNTIKAWECDTGYCV 228 (406)
T ss_pred EEecCCccchhheeHHHH-------------HHHHHHhcCcccceeeEEEEec---CCeeeecccccceeEEecccceeE
Confidence 999999999999999731 1234445677888999999998 679999999999999999999999
Q ss_pred ceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCcc-----c-cCCC
Q 000410 1282 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAV-----S-TTAR 1355 (1553)
Q Consensus 1282 ~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~-----~-s~~~ 1355 (1553)
+++.. |..+|..+....||..+++|+.|.+|++|-+.++.+...+.. |.-+|.++.| .|....-. . ...+
T Consensus 229 ~t~~~--h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~-hEh~vEci~w-ap~~~~~~i~~at~~~~~~ 304 (406)
T KOG0295|consen 229 KTFPG--HSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELRE-HEHPVECIAW-APESSYPSISEATGSTNGG 304 (406)
T ss_pred EeccC--chHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhc-cccceEEEEe-cccccCcchhhccCCCCCc
Confidence 99987 788999999999999999999999999999999977666654 5668999988 55433111 1 1234
Q ss_pred CEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCc
Q 000410 1356 PLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGI 1435 (1553)
Q Consensus 1356 ~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V 1435 (1553)
.++.+++.|+.|++||+.+|.|+.++.++ ..+|
T Consensus 305 ~~l~s~SrDktIk~wdv~tg~cL~tL~gh-----------------------------------------------dnwV 337 (406)
T KOG0295|consen 305 QVLGSGSRDKTIKIWDVSTGMCLFTLVGH-----------------------------------------------DNWV 337 (406)
T ss_pred cEEEeecccceEEEEeccCCeEEEEEecc-----------------------------------------------ccee
Confidence 68999999999999999999999988743 3389
Q ss_pred EEeccCCCC-eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhh
Q 000410 1436 RSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAA 1514 (1553)
Q Consensus 1436 ~sl~~sp~g-~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 1514 (1553)
+.++|+|.| +|+++.+|+++|+||+++..+...+.
T Consensus 338 r~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~-------------------------------------------- 373 (406)
T KOG0295|consen 338 RGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLE-------------------------------------------- 373 (406)
T ss_pred eeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccC--------------------------------------------
Confidence 999999999 67799999999999998765544222
Q ss_pred hhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1515 AATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1515 ~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.|...|+++ .|+.+..|++||+-|-.+|||.
T Consensus 374 -------ah~hfvt~l-Dfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 374 -------AHEHFVTSL-DFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred -------CCcceeEEE-ecCCCCceEEeccccceeeeee
Confidence 288889999 6888899999999999999994
No 206
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.98 E-value=2.6e-31 Score=312.05 Aligned_cols=249 Identities=20% Similarity=0.228 Sum_probs=196.9
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+. +..|++|++...... ......+.+|+.+++.++||||+++++++..+...|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v 77 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE---GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLV 77 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc---chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEE
Confidence 4889999999999999999985 467999998765211 23345677888999999999999999999999999999
Q ss_pred eccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+.++|.+++.. ...+++.+++.++.||+.||+|||++|++||||||+||+++.++.++|+|||.+........
T Consensus 78 ~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--- 154 (286)
T cd07832 78 MEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP--- 154 (286)
T ss_pred ecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC---
Confidence 99997799999864 45689999999999999999999999999999999999999999999999998875532211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHh-------
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRR------- 251 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~------- 251 (1553)
.......++..|+|||.+.+ ...++.++||||+||++|||++|.++|....... ...
T Consensus 155 ---~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (286)
T cd07832 155 ---RLYSHQVATRWYRAPELLYG---------ARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNE 222 (286)
T ss_pred ---CccccccCcccccCceeeec---------cccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCCh
Confidence 11223457888999997642 2346889999999999999999988886432111 000
Q ss_pred --------------cCCCCCC-----CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 --------------GQYDPSQ-----HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 --------------~~~~~~~-----~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+.... ......+..+.++|.+||..||++||+++++++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 223 ETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred HHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000 0111234789999999999999999999999998
No 207
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.98 E-value=2.4e-31 Score=308.33 Aligned_cols=240 Identities=22% Similarity=0.265 Sum_probs=195.2
Q ss_pred eeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-C
Q 000410 33 LGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF-N 109 (1553)
Q Consensus 33 LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~-g 109 (1553)
||.|+||.||+|++. ++.+++|++.+.. .......+.+.+|+.+++.++||||+++++++.++...|++|||++ +
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~--~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRH--IVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGG 78 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhc--chhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCC
Confidence 699999999999997 5779999997642 1223445678889999999999999999999999999999999998 6
Q ss_pred CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceeee
Q 000410 110 SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFD 189 (1553)
Q Consensus 110 sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 189 (1553)
+|.+++.....+++..+..++.||+.||+|||++|++|+||||+||+++.++.++|+|||.++....... ..
T Consensus 79 ~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~--------~~ 150 (262)
T cd05572 79 ELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQK--------TW 150 (262)
T ss_pred cHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccc--------cc
Confidence 9999998877799999999999999999999999999999999999999999999999998875532110 11
Q ss_pred cCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH--HHH-HHhcCC-CCCCCCCCCCC
Q 000410 190 TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH--LLA-YRRGQY-DPSQHLEKIPD 265 (1553)
Q Consensus 190 ~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~--~~~-~~~~~~-~~~~~~~~~~~ 265 (1553)
...+++.|+|||.+. ...++.++|+||+||++|+|++|.+||.... ... +..... ......+...+
T Consensus 151 ~~~~~~~~~~PE~~~----------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (262)
T cd05572 151 TFCGTPEYVAPEIIL----------NKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYID 220 (262)
T ss_pred cccCCcCccChhHhc----------CCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccC
Confidence 224577899999764 3356789999999999999999999996554 222 221110 11222333346
Q ss_pred HHHHHHHHHhcccCcCCCCC-----HHHHHHh
Q 000410 266 SGIRKMILHMIQLEPELRFS-----AESYLQN 292 (1553)
Q Consensus 266 ~~l~~LI~~mL~~dP~~Rps-----a~elL~~ 292 (1553)
+.++++|.+||+.||++||+ ++|+++|
T Consensus 221 ~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~ 252 (262)
T cd05572 221 KAAKDLIKQLLRRNPEERLGNLKGGIKDIKKH 252 (262)
T ss_pred HHHHHHHHHHccCChhhCcCCcccCHHHHhcC
Confidence 78999999999999999999 9999998
No 208
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.98 E-value=2.8e-31 Score=308.61 Aligned_cols=254 Identities=20% Similarity=0.228 Sum_probs=201.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCC-cCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDY-IDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~-~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
+|+..+.||+|+||.||+++.. +..||+|++...... .......+.+..|+.+++.++||||+++++++.+....++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 4778899999999999999874 467999998754222 2233456778899999999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC-cEEEeecCccccccCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-WLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~-~vkL~DFG~a~~~~~~~~~ 180 (1553)
|+||+. ++|.+++...+.+++..+..++.||+.||.|||++|++||||||+||+++.++ .++|+|||.+.........
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~ 160 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG 160 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence 999999 59999998777799999999999999999999999999999999999998776 6999999998655322111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HHHHh-cCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRR-GQYD 255 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~~~~-~~~~ 255 (1553)
. ........++..|+|||.+. +..++.++|+||+||++|+|++|.+||..... ..+.+ ....
T Consensus 161 ~---~~~~~~~~~~~~~~~PE~~~----------~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 227 (268)
T cd06630 161 A---GEFQGQLLGTIAFMAPEVLR----------GEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASAT 227 (268)
T ss_pred C---CccccccccccceeCHhHhc----------cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccC
Confidence 1 11122334678899999764 23567899999999999999999999864321 11111 1111
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 256 PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 256 ~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.....+...++.+.+++.+||..||++||++.++++|
T Consensus 228 ~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~ 264 (268)
T cd06630 228 TAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKH 264 (268)
T ss_pred CCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcC
Confidence 2233444556789999999999999999999999988
No 209
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.98 E-value=3.9e-31 Score=311.89 Aligned_cols=252 Identities=19% Similarity=0.157 Sum_probs=197.5
Q ss_pred ccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEE
Q 000410 24 SYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 24 ~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
...|++.+.||.|+||.||+|++.. ..+++|++... .....+.+.+|+.+++.++||||+++++.+..+...|
T Consensus 11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 85 (292)
T cd06644 11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK-----SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLW 85 (292)
T ss_pred chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC-----CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEE
Confidence 3468999999999999999999864 56999998653 1234456777888999999999999999999999999
Q ss_pred EEeccccC-CHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCC
Q 000410 102 LLRQYFFN-SLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 102 lV~E~~~g-sL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~ 179 (1553)
+||||++| +|..++.+ ...+++.++..++.||+.||.|||++||+||||||+||+++.++.++|+|||.+........
T Consensus 86 lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~ 165 (292)
T cd06644 86 IMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQ 165 (292)
T ss_pred EEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceecccccc
Confidence 99999995 78777654 45689999999999999999999999999999999999999999999999998764321111
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH-HHhcC--CCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-YRRGQ--YDP 256 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-~~~~~--~~~ 256 (1553)
......+++.|+|||.+.... .....++.++|+|||||++|||++|.+||....... +.+.. ..+
T Consensus 166 -------~~~~~~~~~~y~aPE~~~~~~-----~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~ 233 (292)
T cd06644 166 -------RRDSFIGTPYWMAPEVVMCET-----MKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP 233 (292)
T ss_pred -------ccceecCCccccCceeecccc-----ccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCc
Confidence 012234577899999875321 123457889999999999999999999986433222 11111 111
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
....+...+..+.++|.+||+.||++||+++++++|
T Consensus 234 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 234 TLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred cCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 112233445789999999999999999999999988
No 210
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.98 E-value=3.2e-31 Score=306.11 Aligned_cols=250 Identities=20% Similarity=0.224 Sum_probs=203.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|+..+.||+|+||+||+|... ++.|++|++..........+..+.+.+|..+++.++||||+++++++..+...|++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3677899999999999999885 46799999876543333455567788899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||++ ++|.+++...+.+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||.+.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~---- 156 (258)
T cd06632 81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS---- 156 (258)
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccc----
Confidence 99998 5999999877779999999999999999999999999999999999999999999999999876542211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH-H-HhcCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-Y-RRGQYDPSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-~-~~~~~~~~~~~ 260 (1553)
......++..|+|||.+.. ...++.++|+||+||++|+|++|.+||....... . ...........
T Consensus 157 ----~~~~~~~~~~y~~pe~~~~---------~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 223 (258)
T cd06632 157 ----FAKSFKGSPYWMAPEVIAQ---------QGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSKELPPI 223 (258)
T ss_pred ----cccccCCCcceeCHHHhcC---------CCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcccCCCc
Confidence 1123456788999997642 1137889999999999999999999996443211 1 11111222234
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+...++.+++++.+||+.+|++||+++++++|
T Consensus 224 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 255 (258)
T cd06632 224 PDHLSDEAKDFILKCLQRDPSLRPTAAELLEH 255 (258)
T ss_pred CCCcCHHHHHHHHHHhhcCcccCcCHHHHhcC
Confidence 45567889999999999999999999999987
No 211
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.97 E-value=3.3e-31 Score=308.84 Aligned_cols=251 Identities=14% Similarity=0.073 Sum_probs=192.7
Q ss_pred eEEEEEeeccCcEEEEEEEECC-----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE--
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE-----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA-- 99 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~-----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~-- 99 (1553)
|++.+.||+|+||.||+|.... ..||+|++..... .......+..|.+.++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 77 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH---TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQ 77 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC---CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccc
Confidence 4678999999999999998743 4599999865321 12334567788899999999999999998765443
Q ss_pred ----EEEEecccc-CCHHHHhcC------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeec
Q 000410 100 ----AYLLRQYFF-NSLRDRLST------PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF 168 (1553)
Q Consensus 100 ----~~lV~E~~~-gsL~d~l~~------~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DF 168 (1553)
.+++|||+. |+|.+++.. ...+++..+..++.|++.||.|||++||+||||||+||++++++.+||+||
T Consensus 78 ~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 78 KIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred cCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCc
Confidence 799999999 699888733 235899999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHH
Q 000410 169 ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLL 247 (1553)
Q Consensus 169 G~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~ 247 (1553)
|.++........ ........+..|+|||.+. ...++.++|||||||++|||++ |.+||......
T Consensus 158 g~~~~~~~~~~~-----~~~~~~~~~~~~~~pe~~~----------~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~ 222 (273)
T cd05035 158 GLSKKIYSGDYY-----RQGRIAKMPVKWIAIESLA----------DRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH 222 (273)
T ss_pred cceeeccccccc-----cccccccCCccccCHhhcc----------cCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 998765322110 0011122356799999653 3467889999999999999999 78998654332
Q ss_pred HHHhcCC-CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 248 AYRRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 248 ~~~~~~~-~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
....... ......+...+..+.+++.+||+.||++||++.|+++++..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~ 271 (273)
T cd05035 223 EIYDYLRHGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLEN 271 (273)
T ss_pred HHHHHHHcCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 2211111 11222344556789999999999999999999999998753
No 212
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.97 E-value=1.6e-31 Score=321.55 Aligned_cols=252 Identities=19% Similarity=0.252 Sum_probs=197.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe----CCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET----DKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~----~~~ 99 (1553)
+|++.+.||.|+||.||+|.+. +..||+|++.+.... ......+.+|..+++.++||||+++++++.. ...
T Consensus 6 ~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 6 RYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV---PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred ceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccccc---ccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 7899999999999999999875 467999998654221 1233456678899999999999999988753 356
Q ss_pred EEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCC
Q 000410 100 AYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 100 ~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~ 179 (1553)
.|+||||+.++|.+.+.....+++.++..++.||+.||.|||++||+||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~ 162 (334)
T cd07855 83 VYVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPT 162 (334)
T ss_pred EEEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCc
Confidence 89999999999999998777799999999999999999999999999999999999999999999999999875533221
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----Hh--c-
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RR--G- 252 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~--~- 252 (1553)
. ...+.....++..|+|||.+.. ...++.++||||+||++|||++|++||........ .. +
T Consensus 163 ~---~~~~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~ 230 (334)
T cd07855 163 E---HKYFMTEYVATRWYRAPELLLS---------LPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGS 230 (334)
T ss_pred C---CCcccccccccccccChHHhcC---------CcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCC
Confidence 1 1112233457888999997642 23578899999999999999999999965432110 00 0
Q ss_pred -------------------CCCCCCC-----CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 -------------------QYDPSQH-----LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 -------------------~~~~~~~-----~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
....... .....++.++++|.+||+.||++||++++++.|
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 294 (334)
T cd07855 231 PSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQH 294 (334)
T ss_pred ChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 0010000 112246789999999999999999999999998
No 213
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.97 E-value=2.6e-31 Score=313.05 Aligned_cols=249 Identities=20% Similarity=0.214 Sum_probs=195.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+|++.+.||+|+||.||+|.... ..+++|++.... . ......+..|+.+++.++||||+++++.+..+.
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~---~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 76 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA---S-SSELRDLLSEFNLLKQVNHPHVIKLYGACSQDG 76 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC---C-HHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC
Confidence 47888999999999999998742 358888875432 1 233456778889999999999999999999999
Q ss_pred EEEEEecccc-CCHHHHhcCC------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP------------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCE 153 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~------------------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~ 153 (1553)
..|+++||+. ++|.+++... ..+++..+..++.|++.||.|||++||+||||||+
T Consensus 77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~ 156 (290)
T cd05045 77 PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAAR 156 (290)
T ss_pred CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhh
Confidence 9999999999 6999987532 23788899999999999999999999999999999
Q ss_pred cEEEecCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHH
Q 000410 154 NVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAE 233 (1553)
Q Consensus 154 NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~e 233 (1553)
|||+++++.++|+|||+++........ . ......++..|+|||.+. +..++.++|||||||++||
T Consensus 157 nill~~~~~~kl~dfg~~~~~~~~~~~----~-~~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slG~~l~e 221 (290)
T cd05045 157 NVLVAEGRKMKISDFGLSRDVYEEDSY----V-KRSKGRIPVKWMAIESLF----------DHIYTTQSDVWSFGVLLWE 221 (290)
T ss_pred eEEEcCCCcEEeccccccccccCccch----h-cccCCCCCccccCHHHHc----------cCCcchHhHHHHHHHHHHH
Confidence 999999999999999998754221110 0 011223456799999764 3457889999999999999
Q ss_pred HHc-CCCCCCchHHHH---HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 234 LFL-EVPFFELSHLLA---YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 234 Llt-g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
|++ |.+||....... .....+.. ..+...+..+++++.+||+.||++||++.++++.++.
T Consensus 222 l~t~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~ 285 (290)
T cd05045 222 IVTLGGNPYPGIAPERLFNLLKTGYRM--ERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEK 285 (290)
T ss_pred HHhcCCCCCCCCCHHHHHHHHhCCCCC--CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHH
Confidence 998 899997544333 22222221 2234456789999999999999999999999998764
No 214
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.97 E-value=8.2e-31 Score=303.88 Aligned_cols=253 Identities=17% Similarity=0.204 Sum_probs=203.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+|+.||++.+. ++.|++|++...... ....+.+..|..+++.++||||+++++++.+....++|
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv 77 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND---PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIF 77 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc---hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEE
Confidence 4888999999999999999875 467999998765321 45667788999999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||++ ++|.+++...+.+++.++..++.|++.||.|||++||+||||||+||+++.++.+||+|||.+..........
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~- 156 (264)
T cd06626 78 MEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM- 156 (264)
T ss_pred EecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc-
Confidence 99999 6999999887779999999999999999999999999999999999999999999999999987653322211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch-HH--HHHHhcCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS-HL--LAYRRGQYDPSQH 259 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~-~~--~~~~~~~~~~~~~ 259 (1553)
...+....++..|+|||.+.... ...++.++||||+||++|+|++|.+||... .. ..+.... .....
T Consensus 157 --~~~~~~~~~~~~~~~PE~~~~~~-------~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~-~~~~~ 226 (264)
T cd06626 157 --GEEVQSLAGTPAYMAPEVITGGK-------GKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGA-GHKPP 226 (264)
T ss_pred --cccccCCcCCcCccChhhccCCC-------CCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhc-CCCCC
Confidence 11123345678899999875221 134788999999999999999999999633 11 1122121 22222
Q ss_pred CCCCC--CHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIP--DSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~--~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
++... ++.+.++|.+||+.||.+||++++++.|
T Consensus 227 ~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~ 261 (264)
T cd06626 227 IPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQH 261 (264)
T ss_pred CCcccccCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 33332 6789999999999999999999999987
No 215
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.97 E-value=4e-31 Score=305.59 Aligned_cols=244 Identities=16% Similarity=0.119 Sum_probs=191.2
Q ss_pred EEeeccCcEEEEEEEECC-----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEec
Q 000410 31 EVLGGSRFFKSILCKHDE-----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQ 105 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~-----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E 105 (1553)
+.||+|+||.||+|.+.. ..+|+|.+..... ....+.+.+|..+++.+.||||++++++++. ...++|||
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e 75 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHI----AAGKKEFLREASVMAQLDHPCIVRLIGVCKG-EPLMLVME 75 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccc----hHHHHHHHHHHHHHHhcCCCCeeeEEEEEcC-CceEEEEE
Confidence 479999999999997632 4699999865421 1445667888899999999999999998764 46799999
Q ss_pred ccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCc
Q 000410 106 YFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDF 184 (1553)
Q Consensus 106 ~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~ 184 (1553)
|+. |+|.+++...+.+++..+..++.|++.||+|||.+|++||||||+|||++.++.+||+|||.++....... .
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~----~ 151 (257)
T cd05060 76 LAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSD----Y 151 (257)
T ss_pred eCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCc----c
Confidence 998 69999998877899999999999999999999999999999999999999999999999999875532111 0
Q ss_pred ceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH---HHhcCCCCCCCC
Q 000410 185 SFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA---YRRGQYDPSQHL 260 (1553)
Q Consensus 185 ~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~---~~~~~~~~~~~~ 260 (1553)
........++..|+|||.+. ...++.++|||||||++|+|++ |.+||....... ...... ....
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~--~~~~ 219 (257)
T cd05060 152 YRATTAGRWPLKWYAPECIN----------YGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGE--RLPR 219 (257)
T ss_pred cccccCccccccccCHHHhc----------CCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCC--cCCC
Confidence 00011112345799999764 3457889999999999999998 899996543222 222111 1123
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
+...+..++++|.+||..||++||++.++++.++.
T Consensus 220 ~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~ 254 (257)
T cd05060 220 PEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRR 254 (257)
T ss_pred CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHh
Confidence 33445789999999999999999999999988654
No 216
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.97 E-value=4.9e-34 Score=304.88 Aligned_cols=244 Identities=18% Similarity=0.109 Sum_probs=200.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
-|.++++||+|+||.||+|.|++ ..+|||.+... .-.+++.+|+.++++++.|+||+||+.|.....+|+|
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-------sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIV 106 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-------TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIV 106 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-------chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEee
Confidence 35677899999999999999975 56999988443 3345677888999999999999999999888999999
Q ss_pred ecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||+ |++.|.++- +..|++.++..+++.-++||+|||...-+|||||..|||++.+|.+||+|||.+....
T Consensus 107 MEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLT------ 180 (502)
T KOG0574|consen 107 MEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLT------ 180 (502)
T ss_pred hhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhh------
Confidence 99999 899999975 4569999999999999999999999999999999999999999999999999986542
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHHhcCCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRRGQYDPSQHL 260 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~~~~~~~~~~ 260 (1553)
+......+..|||.|||||++.. -.|+.++||||||++..||..|+|||..-. +..+.-.-..+++.+
T Consensus 181 -DTMAKRNTVIGTPFWMAPEVI~E----------IGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF 249 (502)
T KOG0574|consen 181 -DTMAKRNTVIGTPFWMAPEVIEE----------IGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTF 249 (502)
T ss_pred -hhHHhhCccccCcccccHHHHHH----------hccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCC
Confidence 22223457789999999998753 357789999999999999999999996322 111111112233322
Q ss_pred --CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 261 --EKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 261 --~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+...+.++.++|++||.++|++|-||.++++|-
T Consensus 250 ~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~ 284 (502)
T KOG0574|consen 250 KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHT 284 (502)
T ss_pred CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhh
Confidence 334567899999999999999999999999983
No 217
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.97 E-value=2.8e-31 Score=313.55 Aligned_cols=250 Identities=17% Similarity=0.187 Sum_probs=194.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC----------------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE----------------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWA 89 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~----------------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~ 89 (1553)
+|++.+.||+|+||.||+|++.+ ..||+|++.... .......+.+|+++++.++||||++
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~ei~~l~~l~h~~i~~ 81 (295)
T cd05097 6 QLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV----TKTARNDFLKEIKIMSRLKNPNIIR 81 (295)
T ss_pred hCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC----CHHHHHHHHHHHHHHHhCCCCCcCe
Confidence 79999999999999999998642 248999885431 1334456888999999999999999
Q ss_pred EEEEEEeCCEEEEEecccc-CCHHHHhcCCC------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEE
Q 000410 90 FQFWQETDKAAYLLRQYFF-NSLRDRLSTPP------------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVL 156 (1553)
Q Consensus 90 ~~~~~~~~~~~~lV~E~~~-gsL~d~l~~~~------------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NIL 156 (1553)
+++++..+...|+||||+. ++|.+++.... .+++.++..++.|++.||+|||++|++||||||+||+
T Consensus 82 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil 161 (295)
T cd05097 82 LLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCL 161 (295)
T ss_pred EEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEE
Confidence 9999999999999999999 59999885432 3678899999999999999999999999999999999
Q ss_pred EecCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc
Q 000410 157 VTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 236 (1553)
Q Consensus 157 v~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 236 (1553)
++.++.+||+|||++...... ..........++..|+|||.+. ...++.++|||||||++|+|++
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~-----~~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwSlG~~l~el~~ 226 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSG-----DYYRIQGRAVLPIRWMAWESIL----------LGKFTTASDVWAFGVTLWEMFT 226 (295)
T ss_pred EcCCCcEEecccccccccccC-----cceeccCcCcCceeecChhhhc----------cCCcCchhhHHHHHHHHHHHHH
Confidence 999999999999988754211 1111112233466899999764 3457899999999999999998
Q ss_pred --CCCCCCchHHHHHHh--------cCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 237 --EVPFFELSHLLAYRR--------GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 237 --g~~pf~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+..||.......... .........+...++.+.+||.+||+.||++||+++++++.++
T Consensus 227 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 227 LCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred cCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 577886432222111 1111111223344678999999999999999999999998754
No 218
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.97 E-value=3.8e-31 Score=313.53 Aligned_cols=248 Identities=16% Similarity=0.177 Sum_probs=196.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~ 97 (1553)
+|.+.+.||+|+||+||++.+. ...||+|++.+.. .....+.+.+|..+++++ +||||+++++++...
T Consensus 36 ~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 111 (302)
T cd05055 36 NLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTA----HSSEREALMSELKIMSHLGNHENIVNLLGACTIG 111 (302)
T ss_pred HeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccC----ChHHHHHHHHHHHHHHhccCCCCcceEEEEEecC
Confidence 7899999999999999999752 1358999886442 123345678888999999 799999999999999
Q ss_pred CEEEEEecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccc
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~ 174 (1553)
+..|++|||+. |+|.+++... ..+++.++..++.|++.||.|||++||+||||||+|||++.++.++|+|||.++..
T Consensus 112 ~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~ 191 (302)
T cd05055 112 GPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDI 191 (302)
T ss_pred CceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccc
Confidence 99999999999 6999999653 23899999999999999999999999999999999999999999999999998754
Q ss_pred cCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHH----HHH
Q 000410 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHL----LAY 249 (1553)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~----~~~ 249 (1553)
.... . ........++..|+|||.+. ...++.++||||+||++|||++ |.+||..... ...
T Consensus 192 ~~~~----~-~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~ 256 (302)
T cd05055 192 MNDS----N-YVVKGNARLPVKWMAPESIF----------NCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKL 256 (302)
T ss_pred cCCC----c-eeecCCCCcccccCCHhhhc----------cCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHH
Confidence 2211 0 11122334567899999764 3457889999999999999998 8888864322 122
Q ss_pred HhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 250 RRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
...... ...+...++.+.+++.+||..+|++||++.|+++.+.
T Consensus 257 ~~~~~~--~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~ 299 (302)
T cd05055 257 IKEGYR--MAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIG 299 (302)
T ss_pred HHcCCc--CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 222221 1223345678999999999999999999999998865
No 219
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.97 E-value=6.7e-31 Score=308.33 Aligned_cols=249 Identities=18% Similarity=0.164 Sum_probs=190.1
Q ss_pred eEEEEEeeccCcEEEEEEEEC------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe--CC
Q 000410 27 LVLKEVLGGSRFFKSILCKHD------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET--DK 98 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~--~~ 98 (1553)
|++.+.||+|+||+||++... +..||+|++.... .......+.+|+++++.++||||+++++++.. ..
T Consensus 6 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (283)
T cd05080 6 LKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC----GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGK 81 (283)
T ss_pred ceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc----ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCc
Confidence 488999999999999887532 3569999986542 12344567788899999999999999998765 34
Q ss_pred EEEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 99 AAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
..|++|||+. ++|.+++.... +++.++..++.|++.||.|||++||+||||||+|||+++++.++|+|||+++.....
T Consensus 82 ~~~lv~e~~~~~~l~~~~~~~~-l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 160 (283)
T cd05080 82 GLQLIMEYVPLGSLRDYLPKHK-LNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 160 (283)
T ss_pred eEEEEecCCCCCCHHHHHHHcC-CCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCc
Confidence 6899999999 59999987654 899999999999999999999999999999999999999999999999998755221
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH--HHHHHhcCC-
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH--LLAYRRGQY- 254 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~--~~~~~~~~~- 254 (1553)
.. .........++..|+|||.+. ...++.++|||||||++|||++|..||.... .........
T Consensus 161 ~~----~~~~~~~~~~~~~~~~PE~~~----------~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~ 226 (283)
T cd05080 161 HE----YYRVREDGDSPVFWYAVECLK----------ENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQG 226 (283)
T ss_pred ch----hhccCCCCCCCceeeCHhHhc----------ccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhccccc
Confidence 11 000111223456799999764 3457889999999999999999987875321 111110000
Q ss_pred -------------CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 255 -------------DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 255 -------------~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
......+...+..+++++.+||+.||++||+++++++.+.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~ 279 (283)
T cd05080 227 QMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILK 279 (283)
T ss_pred ccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHH
Confidence 0011123344578999999999999999999999998764
No 220
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.97 E-value=5.2e-31 Score=309.68 Aligned_cols=250 Identities=17% Similarity=0.176 Sum_probs=193.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEE-----eC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQE-----TD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~-----~~ 97 (1553)
+|++.+.||+|+||.||+|.+.. ..+++|++.... .....+..|..+++.+ +||||+++++++. .+
T Consensus 19 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~------~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~ 92 (286)
T cd06638 19 TWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH------DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNG 92 (286)
T ss_pred ceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc------chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCC
Confidence 79999999999999999998854 569999875421 1224566777888888 6999999999873 45
Q ss_pred CEEEEEecccc-CCHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccc
Q 000410 98 KAAYLLRQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~ 172 (1553)
...|+||||++ ++|.+++. ....+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|+|||++.
T Consensus 93 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~ 172 (286)
T cd06638 93 DQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSA 172 (286)
T ss_pred CeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCcee
Confidence 67999999998 59988764 33568899999999999999999999999999999999999999999999999987
Q ss_pred cccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HHHHh
Q 000410 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LAYRR 251 (1553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~~~~ 251 (1553)
...... .......|++.|+|||.+.... .....++.++||||+||++|||++|.+||..... ..+..
T Consensus 173 ~~~~~~-------~~~~~~~~~~~y~aPE~~~~~~-----~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~ 240 (286)
T cd06638 173 QLTSTR-------LRRNTSVGTPFWMAPEVIACEQ-----QLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFK 240 (286)
T ss_pred ecccCC-------CccccccCCCcccChhhhchhh-----hccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhh
Confidence 542111 0112345788999999875321 1234578899999999999999999888864332 22222
Q ss_pred cCCC--CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 252 GQYD--PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 252 ~~~~--~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.... +....+...+..+.++|.+||+.||++||++.|+++|.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 241 IPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred ccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 1111 11123344567899999999999999999999999984
No 221
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.97 E-value=3.3e-31 Score=321.24 Aligned_cols=244 Identities=20% Similarity=0.274 Sum_probs=191.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
+|++.+.||+|+||.||+|.+. +..||+|++.+... .......+.+|+.+++.++||||+++++++...
T Consensus 17 ~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 17 RYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ---NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred ceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc---ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 7999999999999999999985 46799999865421 122334566788999999999999999988644
Q ss_pred CEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 98 KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
...|+||||+.++|.+.+... +++.++..++.|++.||+|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 94 ~~~~lv~e~~~~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~ 171 (353)
T cd07850 94 QDVYLVMELMDANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 171 (353)
T ss_pred CcEEEEEeccCCCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCC
Confidence 357999999999999998755 899999999999999999999999999999999999999999999999998754221
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----H----
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----Y---- 249 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~---- 249 (1553)
. ......++..|+|||.+. +..++.++|||||||++|+|++|+.||...+... +
T Consensus 172 ~--------~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~ 233 (353)
T cd07850 172 F--------MMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQL 233 (353)
T ss_pred C--------CCCCCcccccccCHHHHh----------CCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhc
Confidence 1 112234678899999774 3467889999999999999999999996432110 0
Q ss_pred ------------------HhcC--CCCC---CCC------------CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 250 ------------------RRGQ--YDPS---QHL------------EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 250 ------------------~~~~--~~~~---~~~------------~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.... .... ... ....++.++++|.+||+.||++|||+.|+|+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 234 GTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred CCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000 0000 000 11234568999999999999999999999998
No 222
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.97 E-value=3.9e-31 Score=308.27 Aligned_cols=250 Identities=14% Similarity=0.079 Sum_probs=189.2
Q ss_pred EEEEEeeccCcEEEEEEEECCc----eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 28 VLKEVLGGSRFFKSILCKHDEG----LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 28 ~~~~~LG~G~fg~V~~a~~~~~----~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
.+++.||+|+||.||+|..... .+|+|.+.... ......+.+.+|..+++.++||||+++++++...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 78 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI---CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGY 78 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCc---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCC
Confidence 4678999999999999987542 48899875431 1233345677888999999999999999876322
Q ss_pred CEEEEEecccc-CCHHHHhc------CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCc
Q 000410 98 KAAYLLRQYFF-NSLRDRLS------TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFAS 170 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~------~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~ 170 (1553)
...+++|||+. |+|.+++. ....+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||+
T Consensus 79 ~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~ 158 (272)
T cd05075 79 PSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGL 158 (272)
T ss_pred CCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCc
Confidence 25789999999 69988773 223488999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHH
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY 249 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~ 249 (1553)
++....... ........+++.|+|||.+. ...++.++|||||||++|||++ |.+||.......+
T Consensus 159 ~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~----------~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~ 223 (272)
T cd05075 159 SKKIYNGDY-----YRQGRIAKMPVKWIAIESLA----------DRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEI 223 (272)
T ss_pred ccccCcccc-----eecCCcccCCcccCCHHHcc----------CCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHH
Confidence 876532110 00112223466799999653 3467889999999999999999 6899965332222
Q ss_pred HhcCC-CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 250 RRGQY-DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 250 ~~~~~-~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
..... ......+...+..+.++|.+||+.||++|||++++++++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~ 270 (272)
T cd05075 224 YDYLRQGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEK 270 (272)
T ss_pred HHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 11111 11111223345689999999999999999999999998754
No 223
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.97 E-value=4.5e-31 Score=311.10 Aligned_cols=247 Identities=21% Similarity=0.296 Sum_probs=192.1
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+. +..||+|.+....... ....+.+|+++++.++||||+++++++.+++..|+|
T Consensus 6 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (291)
T cd07844 6 TYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEG----APFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLV 81 (291)
T ss_pred ceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccC----CchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEE
Confidence 7999999999999999999885 3679999986542111 112345688999999999999999999999999999
Q ss_pred eccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+.++|.+++... ..+++..++.++.|++.||.|||++||+||||||+||+++.++.+||+|||.+.....+....
T Consensus 82 ~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~- 160 (291)
T cd07844 82 FEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTY- 160 (291)
T ss_pred EecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCccc-
Confidence 999999999988653 468999999999999999999999999999999999999999999999999886543222111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-----HHHHHhcCC---
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-----LLAYRRGQY--- 254 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-----~~~~~~~~~--- 254 (1553)
....++..|+|||.+.+ ...++.++||||+||++|+|++|.+||.... ...+.+...
T Consensus 161 ------~~~~~~~~~~aPE~~~~---------~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (291)
T cd07844 161 ------SNEVVTLWYRPPDVLLG---------STEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPT 225 (291)
T ss_pred ------cccccccccCCcHHhhc---------CcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCC
Confidence 11234678999997642 2346789999999999999999999995432 111100000
Q ss_pred ---------------------CCC---CCCCCCC-CHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 ---------------------DPS---QHLEKIP-DSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ---------------------~~~---~~~~~~~-~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... ...+.+. ...+.++|.+||+.||++||++.++++|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~ 288 (291)
T cd07844 226 EETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKH 288 (291)
T ss_pred hhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcC
Confidence 000 0001111 1578899999999999999999999987
No 224
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=6.4e-31 Score=310.68 Aligned_cols=245 Identities=16% Similarity=0.140 Sum_probs=195.7
Q ss_pred cceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
.+|++.+.||+|+||.||++.+. ++.|++|.+..... .....+.+|..+++.+.||||+++++.+..+...|+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~-----~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~l 94 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-----PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 94 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc-----chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 38999999999999999999874 36799999865421 123456778889999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||++ ++|.+++... .+++.++..++.|++.||.|||++||+||||||+|||++.++.++|+|||.+........
T Consensus 95 v~e~~~~~~L~~~~~~~-~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~-- 171 (296)
T cd06654 95 VMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 171 (296)
T ss_pred eecccCCCCHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccccc--
Confidence 999998 5999998654 489999999999999999999999999999999999999999999999998775421110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH-H-Hh-cCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-Y-RR-GQYDPSQ 258 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-~-~~-~~~~~~~ 258 (1553)
......+++.|+|||.+. ...++.++||||+||++|+|++|.+||....... . .. ....+..
T Consensus 172 -----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 236 (296)
T cd06654 172 -----KRSTMVGTPYWMAPEVVT----------RKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPEL 236 (296)
T ss_pred -----ccCcccCCccccCHHHHc----------CCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCC
Confidence 112234678899999764 3356789999999999999999999996543221 1 11 1111111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+...+..+.++|.+||..||++||++++++++
T Consensus 237 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 237 QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 2233345789999999999999999999999987
No 225
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.97 E-value=5.7e-31 Score=308.81 Aligned_cols=248 Identities=18% Similarity=0.176 Sum_probs=195.7
Q ss_pred eEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|++.+.||.|+||.||++.+.. ..+++|.+... . ....+.+.+|+++++.++||||+++++++..+...|+|+
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~----~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~ 81 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK----S-EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILI 81 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC----C-HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEE
Confidence 6778999999999999999865 45788887543 1 233445677888999999999999999999999999999
Q ss_pred cccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 105 QYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 105 E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||++ ++|.+++.. ...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++.......
T Consensus 82 e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---- 157 (282)
T cd06643 82 EFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---- 157 (282)
T ss_pred EecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEccccccccccccc----
Confidence 9999 588877754 4568999999999999999999999999999999999999999999999999876432111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~ 258 (1553)
.......+++.|+|||.+.... .....++.++||||+||++|||++|.+||....... ...... +..
T Consensus 158 ---~~~~~~~~~~~y~aPE~~~~~~-----~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~ 228 (282)
T cd06643 158 ---QRRDSFIGTPYWMAPEVVMCET-----SKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEP-PTL 228 (282)
T ss_pred ---cccccccccccccCHhhccccC-----CCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCC-CCC
Confidence 1112334678899999875321 224567889999999999999999999996433221 222211 111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+...+..++++|.+||+.||.+||+++++++|
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 229 AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2233456789999999999999999999999988
No 226
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.97 E-value=9.8e-31 Score=301.98 Aligned_cols=245 Identities=24% Similarity=0.340 Sum_probs=199.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||.++... ..+++|.+..... . ......+.+|+++++.++|+||+++++++.+.+..+++
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~--~-~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~ 77 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRL--S-EKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIE 77 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeeccc--c-hhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEE
Confidence 48899999999999999988754 6699999865421 1 23345677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||++ ++|.+++... ..+++.++..++.|++.||.|||+.|++||||||+||+++.++.+||+|||.+........
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~- 156 (256)
T cd08221 78 MEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS- 156 (256)
T ss_pred EEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc-
Confidence 99998 5999999764 4589999999999999999999999999999999999999999999999998875422111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----HhcCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQYDP 256 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~~~~ 256 (1553)
......+++.|+|||.+. +..++.++|+||+||++|||++|..||........ ..+...+
T Consensus 157 ------~~~~~~~~~~y~ape~~~----------~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 220 (256)
T cd08221 157 ------MAETVVGTPYYMSPELCQ----------GVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTP 220 (256)
T ss_pred ------cccccCCCccccCHhhcC----------CCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 112345688899999764 23467889999999999999999999976543332 2222222
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.....+..+.++|.+||..||++||+++++++++
T Consensus 221 ---~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 221 ---VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred ---CccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 2244467899999999999999999999999984
No 227
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.97 E-value=7.3e-31 Score=303.95 Aligned_cols=248 Identities=19% Similarity=0.179 Sum_probs=198.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||+|.+.. ..+++|++.... ....+.+.+|.++++.++||||+++++++......|++
T Consensus 4 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~ 78 (262)
T cd06613 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEP-----GDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIV 78 (262)
T ss_pred ceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCc-----hhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEE
Confidence 79999999999999999999853 669999997542 12346677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||++ ++|.+++... ..+++.++..++.|++.||.|||++||+||||||+||+++.++.++|+|||.+........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-- 156 (262)
T cd06613 79 MEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA-- 156 (262)
T ss_pred EeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhh--
Confidence 99999 5999988765 6799999999999999999999999999999999999999999999999998865421110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHHHHhcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~~~~~~~~~~ 257 (1553)
......++..|+|||.+... ....++.++|+||+||++|+|++|.+||.... ........+.+.
T Consensus 157 -----~~~~~~~~~~y~~Pe~~~~~-------~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~ 224 (262)
T cd06613 157 -----KRKSFIGTPYWMAPEVAAVE-------RKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPP 224 (262)
T ss_pred -----ccccccCCccccCchhhccc-------ccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCc
Confidence 11223467789999976421 11367889999999999999999998886432 222222322221
Q ss_pred C-CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 Q-HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~-~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
. ......+.++.++|.+||..||.+||++.++++|
T Consensus 225 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 260 (262)
T cd06613 225 KLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQH 260 (262)
T ss_pred cccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 1 1122335679999999999999999999999987
No 228
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.97 E-value=6.3e-31 Score=307.95 Aligned_cols=241 Identities=17% Similarity=0.223 Sum_probs=187.4
Q ss_pred EeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHH---HHHhcCCCCCeeEEEEEEEeCCEEEEEecc
Q 000410 32 VLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIR---ETFRSIDHPHVWAFQFWQETDKAAYLLRQY 106 (1553)
Q Consensus 32 ~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~---~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~ 106 (1553)
.||+|+||.||++++.. ..+|+|++.+........ .....++. .++....||||+.+++++..++..|+||||
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~ 78 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG--ETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDL 78 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchH--HHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEec
Confidence 48999999999999854 679999987652211111 11122222 344445799999999999999999999999
Q ss_pred cc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcc
Q 000410 107 FF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFS 185 (1553)
Q Consensus 107 ~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~ 185 (1553)
+. ++|.+++..++.+++..+..++.|++.||+|||++||+||||||+|||++.++.++|+|||++.......
T Consensus 79 ~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~------- 151 (279)
T cd05633 79 MNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------- 151 (279)
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC-------
Confidence 99 6999999887789999999999999999999999999999999999999999999999999886432111
Q ss_pred eeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch---HHHHHHhcCCCCCCCCCC
Q 000410 186 FFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS---HLLAYRRGQYDPSQHLEK 262 (1553)
Q Consensus 186 ~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~---~~~~~~~~~~~~~~~~~~ 262 (1553)
.....|++.|+|||.+. .+..++.++||||+||++|+|++|..||... ...............++.
T Consensus 152 --~~~~~~~~~y~aPE~~~---------~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 220 (279)
T cd05633 152 --PHASVGTHGYMAPEVLQ---------KGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPD 220 (279)
T ss_pred --ccCcCCCcCccCHHHhc---------CCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCcc
Confidence 11235788999999763 1235788999999999999999999998532 222222222222333455
Q ss_pred CCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 263 IPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
..+..++++|.+||..||.+|| ++.++++|
T Consensus 221 ~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 221 SFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred ccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 5678999999999999999999 69999998
No 229
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.97 E-value=5.8e-31 Score=306.08 Aligned_cols=250 Identities=15% Similarity=0.133 Sum_probs=195.6
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--C---ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--E---GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~---~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~ 100 (1553)
+|++.+.||+|+||.||+|.+. + ..+++|.+.... .....+.+.+|..+++.++||||+++++++.+++..
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 80 (267)
T cd05066 5 CIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY----TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPV 80 (267)
T ss_pred HeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCcc
Confidence 7899999999999999999874 1 258888875431 133455778888999999999999999999999999
Q ss_pred EEEecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 101 YLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
|+||||++ ++|.+++... +.+++.++..++.|++.||.|||++|++||||||+|||++.++.++|+|||.+.......
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 81 MIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 99999998 5999999764 458999999999999999999999999999999999999999999999999887542211
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHH---HHHhcCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLL---AYRRGQY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~---~~~~~~~ 254 (1553)
. .........++..|+|||.+. ...++.++|+|||||++||+++ |..||...... ......+
T Consensus 161 ~----~~~~~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~ 226 (267)
T cd05066 161 E----AAYTTRGGKIPIRWTAPEAIA----------YRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY 226 (267)
T ss_pred c----eeeecCCCccceeecCHhHhc----------cCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC
Confidence 1 111111222356799999764 3457889999999999999886 88888543221 1111112
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
.. ..+...++.+.+++.+||+.+|.+||++.++++.+..
T Consensus 227 ~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 265 (267)
T cd05066 227 RL--PAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDK 265 (267)
T ss_pred cC--CCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHh
Confidence 11 1223345789999999999999999999999987653
No 230
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.97 E-value=3e-31 Score=312.91 Aligned_cols=248 Identities=19% Similarity=0.278 Sum_probs=195.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--CEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD--KAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~--~~~~ 101 (1553)
+|++.+.||.|+||.||+|.+.. ..+++|.+...... +.....+.+|+.+++.+.||||+++++++... ...|
T Consensus 6 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (293)
T cd07843 6 EYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK---EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIY 82 (293)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc---ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEE
Confidence 68889999999999999999863 56999998654221 22334456778899999999999999998877 8899
Q ss_pred EEeccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+||||++++|.+++... ..+++.+++.++.||+.||+|||++|++||||||+||+++.++.++|+|||.+.....+...
T Consensus 83 lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 162 (293)
T cd07843 83 MVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKP 162 (293)
T ss_pred EEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccc
Confidence 99999999999998764 35899999999999999999999999999999999999999999999999988765432211
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----Hhc----
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRG---- 252 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~---- 252 (1553)
.....+++.|+|||.+.+ ...++.++||||+||++|+|++|.+||........ ...
T Consensus 163 -------~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~ 226 (293)
T cd07843 163 -------YTQLVVTLWYRAPELLLG---------AKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTP 226 (293)
T ss_pred -------cccccccccccCchhhcC---------CccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 122335778999997742 22467899999999999999999999964322111 000
Q ss_pred -----------------C-----CC-CCCCCCCC-CCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 -----------------Q-----YD-PSQHLEKI-PDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 -----------------~-----~~-~~~~~~~~-~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
. +. ....++.. .++.+.++|.+||+.||++|||++|+++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~ 290 (293)
T cd07843 227 TEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKH 290 (293)
T ss_pred chHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcC
Confidence 0 00 01112222 36789999999999999999999999988
No 231
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.97 E-value=3.4e-31 Score=314.93 Aligned_cols=252 Identities=20% Similarity=0.290 Sum_probs=193.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK----- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~----- 98 (1553)
+|++.+.||.|+||.||+|.+.. +.||+|.+...... +.....+.+|..+++.++||||+++++++....
T Consensus 13 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (310)
T cd07865 13 KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEK---EGFPITALREIKILQLLKHENVVNLIEICRTKATPYNR 89 (310)
T ss_pred heEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCc---CCchhHHHHHHHHHHhCCCCCccceEEEEecccccccC
Confidence 79999999999999999999863 67999998654221 112233456778999999999999999886543
Q ss_pred ---EEEEEeccccCCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccc
Q 000410 99 ---AAYLLRQYFFNSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174 (1553)
Q Consensus 99 ---~~~lV~E~~~gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~ 174 (1553)
..|+||||+.++|.+.+.... .+++.+++.++.||+.||+|||++|++||||||+||+++.++.+||+|||.+...
T Consensus 90 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 169 (310)
T cd07865 90 YKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLADFGLARAF 169 (310)
T ss_pred CCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECcCCCcccc
Confidence 459999999999999887653 6899999999999999999999999999999999999999999999999998766
Q ss_pred cCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----H
Q 000410 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----R 250 (1553)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~ 250 (1553)
..+.... ........++..|+|||.+.+ ...++.++||||+||++|||++|.+||........ .
T Consensus 170 ~~~~~~~---~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~ 237 (310)
T cd07865 170 SLSKNSK---PNRYTNRVVTLWYRPPELLLG---------ERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLIS 237 (310)
T ss_pred cCCcccC---CCCccCcccCccccCcHHhcC---------CcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 4333221 111123345778999997642 23467899999999999999999999965432110 0
Q ss_pred --hcCCCC--------------------------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 251 --RGQYDP--------------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 251 --~~~~~~--------------------------~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+...+ ......+.+..++++|.+||..||.+|||++|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h 307 (310)
T cd07865 238 QLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307 (310)
T ss_pred HHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcC
Confidence 010000 000112335678899999999999999999999998
No 232
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.97 E-value=2.5e-31 Score=307.80 Aligned_cols=247 Identities=16% Similarity=0.136 Sum_probs=197.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.+.||.|+||.||+|.+.+ +.+++|++.+.. ......+..|..+++.++||||+++++++.+....|+||
T Consensus 7 ~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 81 (261)
T cd05148 7 EFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD-----LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIIT 81 (261)
T ss_pred HHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc-----hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEE
Confidence 68999999999999999999876 569999986542 222345777889999999999999999999999999999
Q ss_pred cccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ ++|.+++... ..+++.++..++.||+.||.|||++||+||||||+||+++.++.+||+|||.+.......
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~--- 158 (261)
T cd05148 82 ELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV--- 158 (261)
T ss_pred eecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcc---
Confidence 9999 5999999753 358999999999999999999999999999999999999999999999999886542111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHH-HhcCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY-RRGQYDPSQH 259 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~-~~~~~~~~~~ 259 (1553)
.......++..|+|||.+. ...++.++|||||||++|+|++ |+.||........ ..........
T Consensus 159 ----~~~~~~~~~~~~~~PE~~~----------~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~ 224 (261)
T cd05148 159 ----YLSSDKKIPYKWTAPEAAS----------HGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMP 224 (261)
T ss_pred ----ccccCCCCceEecCHHHHc----------cCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCC
Confidence 1112333466799999764 3457889999999999999998 7999965432221 1111111122
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.+...++.+.++|.+||+.||.+|||+.++++.+.
T Consensus 225 ~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~ 259 (261)
T cd05148 225 CPAKCPQEIYKIMLECWAAEPEDRPSFKALREELD 259 (261)
T ss_pred CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 33455678999999999999999999999998865
No 233
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.97 E-value=7.9e-31 Score=309.07 Aligned_cols=247 Identities=20% Similarity=0.302 Sum_probs=191.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+. ++.|++|++...... .....+.+|..+++.++|+||+++++++..+...|+|
T Consensus 6 ~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 81 (291)
T cd07870 6 SYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE----GVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFV 81 (291)
T ss_pred eeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC----CCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEE
Confidence 7999999999999999999875 467999998654211 1122345677899999999999999999999999999
Q ss_pred eccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+.++|.+++.. ...+++.+++.++.|++.||.|||++||+||||||+|||++.++.++|+|||+++....+...
T Consensus 82 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~-- 159 (291)
T cd07870 82 FEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQT-- 159 (291)
T ss_pred EecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCC--
Confidence 99999999887754 345888999999999999999999999999999999999999999999999988754322111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH--HHHHh-----c---
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL--LAYRR-----G--- 252 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~--~~~~~-----~--- 252 (1553)
.....+++.|+|||.+.+ ...++.++|||||||++|+|++|.+||..... ..+.. +
T Consensus 160 -----~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~ 225 (291)
T cd07870 160 -----YSSEVVTLWYRPPDVLLG---------ATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPT 225 (291)
T ss_pred -----CCCccccccccCCceeec---------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCC
Confidence 122235788999997642 22467789999999999999999999963221 11000 0
Q ss_pred -----------CCCC-------CCC----CCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 -----------QYDP-------SQH----LEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 -----------~~~~-------~~~----~~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+.. ... +.. ..+..+.+++.+||..||++|||++|++.|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h 288 (291)
T cd07870 226 EDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLH 288 (291)
T ss_pred hhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcC
Confidence 0000 000 000 124578999999999999999999999988
No 234
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=9.9e-34 Score=296.78 Aligned_cols=252 Identities=20% Similarity=0.268 Sum_probs=196.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe-------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET------- 96 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~------- 96 (1553)
.|.-..+||+|.||.||+|++++ +.||+|+.....+. +.+-..-.+|+++|..++|+|++.+++++.+
T Consensus 18 ~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneK---eGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r 94 (376)
T KOG0669|consen 18 KYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEK---EGFPITALREIKILQLLKHENVVNLIEICRTKATPTNR 94 (376)
T ss_pred HHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccc---cCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccc
Confidence 67778899999999999999865 45788765443211 1122234467789999999999998877632
Q ss_pred -CCEEEEEeccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccc
Q 000410 97 -DKAAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174 (1553)
Q Consensus 97 -~~~~~lV~E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~ 174 (1553)
...+|+|+.+|+.+|...++.+ ..++..+++.++.+++.||.|+|...|+|||+|++|+||+.+|.+||+|||+++..
T Consensus 95 ~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~f 174 (376)
T KOG0669|consen 95 DRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAF 174 (376)
T ss_pred ccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccce
Confidence 2358999999999999999887 57999999999999999999999999999999999999999999999999999877
Q ss_pred cCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----H-
Q 000410 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----Y- 249 (1553)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~- 249 (1553)
..+....... +.....|.+|++||.+.+ ...|++++|||..|||++||+++.|.|.+....+ +
T Consensus 175 s~~~n~~kpr---ytnrvvTLwYrppEllLG---------~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is 242 (376)
T KOG0669|consen 175 STSKNVVKPR---YTNRVVTLWYRPPELLLG---------DREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLIS 242 (376)
T ss_pred ecccccCCCC---cccceeeeecCCHHHhhc---------ccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHH
Confidence 6554322111 334556899999998864 4578999999999999999999999996543211 1
Q ss_pred --------------------HhcCCCCCC--C--------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 250 --------------------RRGQYDPSQ--H--------LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 250 --------------------~~~~~~~~~--~--------~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
......+.+ . -+...+++..+|+.+||..||.+|+.++++|+|
T Consensus 243 ~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 243 QLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred HHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 111111000 0 011225578899999999999999999999998
No 235
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=3.2e-32 Score=321.25 Aligned_cols=249 Identities=20% Similarity=0.248 Sum_probs=199.1
Q ss_pred CCccceEEEEEeeccCcEEEEEEEECCce--EEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-
Q 000410 22 PSSYNLVLKEVLGGSRFFKSILCKHDEGL--VLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK- 98 (1553)
Q Consensus 22 ~~~~~y~~~~~LG~G~fg~V~~a~~~~~~--vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~- 98 (1553)
|...-.++...||+|+|-+||+|.+...- ||---+.. .+........++|..|+.+|+.|+||||++||.++.+..
T Consensus 37 p~gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~-~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n 115 (632)
T KOG0584|consen 37 PTGRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKI-RDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDN 115 (632)
T ss_pred CCCceeehhhhcccccceeeeeccccccchhhHHHHHhH-HHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCC
Confidence 43333467789999999999999996522 33221111 112233455678999999999999999999999997665
Q ss_pred -EEEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCcEEEecC-CcEEEeecCcccc
Q 000410 99 -AAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKG--ICHGDIKCENVLVTSW-NWLYLSDFASFKP 173 (1553)
Q Consensus 99 -~~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~g--IvHrDIKp~NILv~~~-~~vkL~DFG~a~~ 173 (1553)
...+|+|++. |+|..|+++.+.++...++.|++||++||.|||++. |+|||||.+||+|+.+ |.|||+|+|+|..
T Consensus 116 ~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl 195 (632)
T KOG0584|consen 116 KTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATL 195 (632)
T ss_pred ceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHH
Confidence 4889999999 899999999999999999999999999999999985 9999999999999865 8999999999986
Q ss_pred ccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCc-hHHHH-HHh
Q 000410 174 TYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFEL-SHLLA-YRR 251 (1553)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~-~~~~~-~~~ 251 (1553)
...+ ......|||.|||||++. ..|++.+||||||+++.||.|+..||.. ....+ |++
T Consensus 196 ~r~s---------~aksvIGTPEFMAPEmYE-----------E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKK 255 (632)
T KOG0584|consen 196 LRKS---------HAKSVIGTPEFMAPEMYE-----------ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKK 255 (632)
T ss_pred hhcc---------ccceeccCccccChHHHh-----------hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHH
Confidence 5221 112357999999999773 4789999999999999999999989853 22222 332
Q ss_pred cCCC-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 GQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ~~~~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
-... .+..+.++.++++++||.+||.. ..+|||+.|+|+|
T Consensus 256 V~SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 256 VTSGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred HHcCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 2221 22357888899999999999999 8999999999998
No 236
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.97 E-value=6.9e-31 Score=307.71 Aligned_cols=248 Identities=15% Similarity=0.164 Sum_probs=196.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe-CC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET-DK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~-~~ 98 (1553)
+|++.+.||+|+||.||+|.+.+ ..|++|++... ........+.+|..+++.++||||+++++++.. +.
T Consensus 7 ~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~----~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~ 82 (280)
T cd05043 7 RVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH----ASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE 82 (280)
T ss_pred heEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC----CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC
Confidence 79999999999999999999864 45888887533 123334567788889999999999999998765 56
Q ss_pred EEEEEecccc-CCHHHHhcCC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecC
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP--------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFA 169 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~--------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG 169 (1553)
..+++++|+. ++|.+++... ..+++.++..++.||+.||+|||++|++||||||+||++++++.+||+|||
T Consensus 83 ~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g 162 (280)
T cd05043 83 PPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNA 162 (280)
T ss_pred CCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCC
Confidence 7899999998 6999998653 358899999999999999999999999999999999999999999999999
Q ss_pred ccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH
Q 000410 170 SFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA 248 (1553)
Q Consensus 170 ~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~ 248 (1553)
+++...... .........++..|+|||.+. ...++.++|||||||++||+++ |++||.......
T Consensus 163 ~~~~~~~~~-----~~~~~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~ 227 (280)
T cd05043 163 LSRDLFPMD-----YHCLGDNENRPVKWMALESLV----------NKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFE 227 (280)
T ss_pred CcccccCCc-----eEEeCCCCCcchhccCHHHHh----------cCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHH
Confidence 987542211 111112234566799999764 3457889999999999999998 899997544333
Q ss_pred HH---hcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 249 YR---RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 249 ~~---~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+. ...+... .....++.+.+++.+||..||++|||+.++++.+.
T Consensus 228 ~~~~~~~~~~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 274 (280)
T cd05043 228 MAAYLKDGYRLA--QPINCPDELFAVMACCWALDPEERPSFSQLVQCLT 274 (280)
T ss_pred HHHHHHcCCCCC--CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 22 2222211 22334678999999999999999999999998754
No 237
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.97 E-value=7.9e-31 Score=303.24 Aligned_cols=243 Identities=16% Similarity=0.090 Sum_probs=188.9
Q ss_pred EeeccCcEEEEEEEEC--C--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 32 VLGGSRFFKSILCKHD--E--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 32 ~LG~G~fg~V~~a~~~--~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
.||+|+||.||+|.+. + ..||+|++... ......+.+.+|+.+++.++||||++++++++. ...++||||+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~----~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~ 76 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNE----NEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMA 76 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccc----cChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeC
Confidence 4899999999999764 2 34899988543 123455678889999999999999999998864 4689999999
Q ss_pred c-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcc
Q 000410 108 F-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFS 185 (1553)
Q Consensus 108 ~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~ 185 (1553)
+ ++|.+++.. +..+++.++..++.||+.||.|||++|++||||||+|||++.++.+||+|||.+........ ..
T Consensus 77 ~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~----~~ 152 (257)
T cd05115 77 SGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDS----YY 152 (257)
T ss_pred CCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCcc----ce
Confidence 8 699999874 45689999999999999999999999999999999999999999999999998874422111 00
Q ss_pred eeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHH---HhcCCCCCCCCC
Q 000410 186 FFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY---RRGQYDPSQHLE 261 (1553)
Q Consensus 186 ~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~---~~~~~~~~~~~~ 261 (1553)
.......+++.|+|||.+. ...++.++|||||||++|||++ |.+||........ ..... ....+
T Consensus 153 ~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~ 220 (257)
T cd05115 153 KARSAGKWPLKWYAPECIN----------FRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGK--RLDCP 220 (257)
T ss_pred eccCCCCCCcccCCHHHHc----------cCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCC--CCCCC
Confidence 0111122346799999764 3357889999999999999996 8999964332221 11111 12234
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
...++++.++|.+||..||++||++.++.+.++.
T Consensus 221 ~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~ 254 (257)
T cd05115 221 AECPPEMYALMKDCWIYKWEDRPNFAKVEERMRT 254 (257)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhh
Confidence 4556899999999999999999999999998764
No 238
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.97 E-value=5.7e-31 Score=307.35 Aligned_cols=245 Identities=18% Similarity=0.159 Sum_probs=197.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||+|++.. ..|++|++.... .......+.+|..+++.++||||+++++++.++...|+|
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 77 (274)
T cd06609 2 LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE----AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWII 77 (274)
T ss_pred hhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc----cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEE
Confidence 57888999999999999999854 569999986542 122334567788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||++ ++|.+++... .+++.++..++.|++.||.|||++|++||||+|+||++++++.++|+|||.++........
T Consensus 78 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~-- 154 (274)
T cd06609 78 MEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSK-- 154 (274)
T ss_pred EEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccc--
Confidence 99999 5999999876 6899999999999999999999999999999999999999999999999998765332111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhc-CCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRG-QYDPSQHLE 261 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~-~~~~~~~~~ 261 (1553)
.....+++.|+|||.+. +..++.++|||||||++|+|++|.+||...+....... .....+.+.
T Consensus 155 -----~~~~~~~~~y~~PE~~~----------~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 219 (274)
T cd06609 155 -----RNTFVGTPFWMAPEVIK----------QSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSLE 219 (274)
T ss_pred -----cccccCCccccChhhhc----------cCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCCc
Confidence 11234567799999764 23478999999999999999999999965432221111 111111222
Q ss_pred CC-CCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 262 KI-PDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 262 ~~-~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.. .++.+.+++.+||..||++||+++++++|
T Consensus 220 ~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 220 GNKFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred ccccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 22 56789999999999999999999999987
No 239
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.97 E-value=7e-32 Score=286.33 Aligned_cols=254 Identities=15% Similarity=0.152 Sum_probs=194.1
Q ss_pred cccccCCCccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHH-HHhcCCCCCeeEEEE
Q 000410 16 YYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRE-TFRSIDHPHVWAFQF 92 (1553)
Q Consensus 16 ~~~~~l~~~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~-~l~~l~hpnIv~~~~ 92 (1553)
.|..|+. +++.+..||+|.-|.|+++++.. ...|||.+.+.++. ++ .+++....+ +++.-+.|+||+.++
T Consensus 86 r~~~din---dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nk---ee-~kRILmDldvv~~s~dcpyIV~c~G 158 (391)
T KOG0983|consen 86 RYQADIN---DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNK---EE-NKRILMDLDVVLKSHDCPYIVQCFG 158 (391)
T ss_pred ccccChH---HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCH---HH-HHHHHHhhhHHhhccCCCeeeeeee
Confidence 3444444 56667789999999999999976 67999999877433 22 333333334 444445899999999
Q ss_pred EEEeCCEEEEEeccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCc
Q 000410 93 WQETDKAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFAS 170 (1553)
Q Consensus 93 ~~~~~~~~~lV~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~ 170 (1553)
+|..+..+++.||.|...+..+++. .++++|.-+-.+..-++.||.||.+ +||+|||+||+|||++..|.+||||||.
T Consensus 159 yFi~n~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGI 238 (391)
T KOG0983|consen 159 YFITNTDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGI 238 (391)
T ss_pred EEeeCchHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccc
Confidence 9999999999999998544444432 3448899899999999999999986 6999999999999999999999999998
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-----
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----- 245 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----- 245 (1553)
+....... ......|-+.|||||++.-. ....|+-++||||||++++||.||..||.+.+
T Consensus 239 sGrlvdSk--------AhtrsAGC~~YMaPERidp~-------~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ 303 (391)
T KOG0983|consen 239 SGRLVDSK--------AHTRSAGCAAYMAPERIDPP-------DKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEV 303 (391)
T ss_pred cceeeccc--------ccccccCCccccCccccCCC-------CCCccchhhhhhhhccchhhhhcccCCCCCCCccHHH
Confidence 86553222 22345677889999998532 24578999999999999999999999997632
Q ss_pred HHHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 246 LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.++.. ..++......-.++.+++++..||.+|+.+||...++|+|
T Consensus 304 ltkvln-~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 304 LTKVLN-EEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred HHHHHh-cCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 223333 2222211122367899999999999999999999999998
No 240
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.97 E-value=3.6e-31 Score=318.72 Aligned_cols=249 Identities=19% Similarity=0.269 Sum_probs=193.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC-----C
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD-----K 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~-----~ 98 (1553)
+|++.+.||+|+||.||+|.+. +..||+|++... ........+.+|+.+++.++||||+++++++... .
T Consensus 6 ~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 81 (336)
T cd07849 6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPF----EHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFN 81 (336)
T ss_pred ceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccc----ccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccc
Confidence 7999999999999999999875 467999998532 1223445566788999999999999999876543 3
Q ss_pred EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 99 AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 99 ~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
..|+++||++++|.+++..+ .+++..++.++.|++.||.|||++||+||||||+|||++.++.++|+|||++.......
T Consensus 82 ~~~lv~e~~~~~l~~~~~~~-~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~ 160 (336)
T cd07849 82 DVYIVQELMETDLYKLIKTQ-HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEH 160 (336)
T ss_pred eEEEEehhcccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccc
Confidence 58999999999999988654 48999999999999999999999999999999999999999999999999987653322
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHH----h---
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYR----R--- 251 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~----~--- 251 (1553)
.... ......+++.|+|||.+.+ ...++.++||||+||++|+|++|++||...+..... .
T Consensus 161 ~~~~----~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~ 227 (336)
T cd07849 161 DHTG----FLTEYVATRWYRAPEIMLN---------SKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLG 227 (336)
T ss_pred cccC----CcCCcCcCCCccChHHhhC---------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcC
Confidence 1111 1223456888999997632 235688999999999999999999999654321100 0
Q ss_pred ---------------------cCCCCCCC---CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 ---------------------GQYDPSQH---LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ---------------------~~~~~~~~---~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
........ .....++.+.++|.+||+.||++||++.|+++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 228 TPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred CCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000 011225679999999999999999999999998
No 241
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.97 E-value=6.9e-31 Score=308.48 Aligned_cols=248 Identities=22% Similarity=0.287 Sum_probs=193.0
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|++. +..||+|++...... ....+.+.+|+.+++.++||||++++++++.+...|+|
T Consensus 2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 78 (286)
T cd07847 2 KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDD---PVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLV 78 (286)
T ss_pred ceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccC---ccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEE
Confidence 6899999999999999999986 367999998654211 12334567788999999999999999999999999999
Q ss_pred eccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+++ .|..++.....+++.+++.++.||+.||.|||++|++||||||+||+++.++.++|+|||++........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--- 155 (286)
T cd07847 79 FEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD--- 155 (286)
T ss_pred EeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcc---
Confidence 999996 5555555555699999999999999999999999999999999999999999999999999875532211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HHHHhc------
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRG------ 252 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~~~~~------ 252 (1553)
......++..|+|||.+.+ ...++.++||||+||++|+|++|.+||..... ......
T Consensus 156 ----~~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 222 (286)
T cd07847 156 ----DYTDYVATRWYRAPELLVG---------DTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIP 222 (286)
T ss_pred ----cccCcccccccCCHHHHhC---------CCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCh
Confidence 0112235678999997642 23567899999999999999999999964321 111110
Q ss_pred ---------C-----CCCCC-C------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 ---------Q-----YDPSQ-H------LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ---------~-----~~~~~-~------~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
. ..+.. . .....+..+.+||.+||+.||++||++.|+++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~ 283 (286)
T cd07847 223 RHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEH 283 (286)
T ss_pred HHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcC
Confidence 0 00000 0 001235678999999999999999999999988
No 242
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.97 E-value=4e-31 Score=309.65 Aligned_cols=250 Identities=18% Similarity=0.151 Sum_probs=198.7
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||++.+. +..+++|++... .....+.+..|+++++.++||||+++++++..+...|+|
T Consensus 6 ~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (280)
T cd06611 6 IWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE-----SEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWIL 80 (280)
T ss_pred HHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC-----CHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEE
Confidence 6889999999999999999985 366999998643 123335577788999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||++ ++|.+++... ..+++.+++.++.|++.||.|||++||+||||||+||+++.++.++|+|||.+........
T Consensus 81 ~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-- 158 (280)
T cd06611 81 IEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ-- 158 (280)
T ss_pred eeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhccccc--
Confidence 99999 5999988663 4699999999999999999999999999999999999999999999999998764321111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH-HhcCCC--CCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY-RRGQYD--PSQ 258 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~-~~~~~~--~~~ 258 (1553)
......+++.|+|||.+.... .....++.++|+|||||++|+|++|.+||........ ...... +..
T Consensus 159 -----~~~~~~~~~~y~~PE~~~~~~-----~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 228 (280)
T cd06611 159 -----KRDTFIGTPYWMAPEVVACET-----FKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTL 228 (280)
T ss_pred -----ccceeecchhhcCHHHHhhcc-----cCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCc
Confidence 111234678899999875322 1234678899999999999999999999975433221 111111 111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+...+..+.++|.+||+.||.+||+++++++|
T Consensus 229 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 229 DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 2233456789999999999999999999999998
No 243
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=6.2e-31 Score=316.38 Aligned_cols=252 Identities=17% Similarity=0.172 Sum_probs=196.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC---------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE---------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQE 95 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~---------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~ 95 (1553)
+|++.+.||+|+||.||+|++.+ ..||+|++... ......+.+.+|+.+++.+ +||||+++++++.
T Consensus 13 ~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~ 88 (334)
T cd05100 13 RLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD----ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACT 88 (334)
T ss_pred HeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc----cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEc
Confidence 69999999999999999997632 25899987543 1223345677888899999 7999999999999
Q ss_pred eCCEEEEEecccc-CCHHHHhcCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEe
Q 000410 96 TDKAAYLLRQYFF-NSLRDRLSTPP----------------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 158 (1553)
Q Consensus 96 ~~~~~~lV~E~~~-gsL~d~l~~~~----------------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~ 158 (1553)
.+...|++|||++ |+|.+++..+. .++..++..++.|++.||.|||++||+||||||+|||++
T Consensus 89 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~ 168 (334)
T cd05100 89 QDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVT 168 (334)
T ss_pred cCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc
Confidence 9999999999998 69999986532 377888999999999999999999999999999999999
Q ss_pred cCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-C
Q 000410 159 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 237 (1553)
Q Consensus 159 ~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 237 (1553)
.++.+||+|||.++...... .........++..|+|||.+. ...++.++|||||||++|||++ |
T Consensus 169 ~~~~~kL~Dfg~~~~~~~~~-----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~el~~~g 233 (334)
T cd05100 169 EDNVMKIADFGLARDVHNID-----YYKKTTNGRLPVKWMAPEALF----------DRVYTHQSDVWSFGVLLWEIFTLG 233 (334)
T ss_pred CCCcEEECCcccceeccccc-----ccccccCCCcCceEcCHHHhc----------cCCcCchhhhHHHHHHHHHHHhcC
Confidence 99999999999987542111 000111222345799999764 3457889999999999999998 7
Q ss_pred CCCCCchHHHHHHhcCCC-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhcc
Q 000410 238 VPFFELSHLLAYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAV 296 (1553)
Q Consensus 238 ~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~ 296 (1553)
.+||.............. .....+...+..+.++|.+||+.+|++||++.|++++++..
T Consensus 234 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~ 293 (334)
T cd05100 234 GSPYPGIPVEELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRV 293 (334)
T ss_pred CCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 888875544333221111 11122334457899999999999999999999999997654
No 244
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=9.6e-31 Score=306.24 Aligned_cols=243 Identities=16% Similarity=0.201 Sum_probs=189.3
Q ss_pred EeeccCcEEEEEEEECC--ceEEEEEEeccCCCc-CHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc
Q 000410 32 VLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYI-DLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF 108 (1553)
Q Consensus 32 ~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~-~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~ 108 (1553)
.||+|+||.||+|++.. +.||+|++.+..... ..+........+...++...||||+++++++......|+||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 48999999999998853 679999987652111 111111111222344555689999999999999999999999999
Q ss_pred -CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 109 -NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 109 -gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
++|.+++...+.+++.+++.++.|++.||.|||++||+||||||+||+++.++.++|+|||++.......
T Consensus 81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~--------- 151 (278)
T cd05606 81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK--------- 151 (278)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC---------
Confidence 5999999887789999999999999999999999999999999999999999999999999886442111
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch---HHHHHHhcCCCCCCCCCCCC
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS---HLLAYRRGQYDPSQHLEKIP 264 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~---~~~~~~~~~~~~~~~~~~~~ 264 (1553)
.....|+..|+|||.+.. +..++.++||||+||++|||++|..||... ...............++...
T Consensus 152 ~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (278)
T cd05606 152 PHASVGTHGYMAPEVLQK---------GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSF 222 (278)
T ss_pred CcCcCCCcCCcCcHHhcC---------CCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcC
Confidence 123357888999997641 235788999999999999999999999654 22222222222233345555
Q ss_pred CHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 265 DSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 265 ~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
+..+.++|.+||..||.+|| ++.++++|
T Consensus 223 s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~ 255 (278)
T cd05606 223 SPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEH 255 (278)
T ss_pred CHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhC
Confidence 78999999999999999999 99999987
No 245
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.97 E-value=4.3e-31 Score=309.49 Aligned_cols=244 Identities=22% Similarity=0.295 Sum_probs=187.9
Q ss_pred eEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeC--CEEE
Q 000410 27 LVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETD--KAAY 101 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~--~~~~ 101 (1553)
|++.+.||+|+||.||+|.+. +..||+|++.+..... . ... ..+|..+++++. ||||+++++++.++ +..|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~--~-~~~-~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~ 76 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSL--E-QVN-NLREIQALRRLSPHPNILRLIEVLFDRKTGRLA 76 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCc--h-hhh-HHHHHHHHhhcCCCCCccceEEEEecCCCCcEE
Confidence 578899999999999999885 3669999986542111 1 112 234556777774 99999999999887 8899
Q ss_pred EEeccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+||||++++|.+.+.. ...+++.++..++.|++.||+|||++|++||||||+||+++. +.+||+|||.++.......
T Consensus 77 lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~- 154 (282)
T cd07831 77 LVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP- 154 (282)
T ss_pred EEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCC-
Confidence 9999999999998875 356899999999999999999999999999999999999999 9999999998875422111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhc----
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRG---- 252 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~---- 252 (1553)
+....++..|+|||.+.. ...++.++||||+||++|||++|.+||...+... ....
T Consensus 155 -------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~ 218 (282)
T cd07831 155 -------YTEYISTRWYRAPECLLT---------DGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTP 218 (282)
T ss_pred -------cCCCCCCcccCChhHhhc---------CCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCC
Confidence 112235778999997642 2356789999999999999999999997543211 1000
Q ss_pred --------------CCCCCC-------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 --------------QYDPSQ-------HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 --------------~~~~~~-------~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+.... .+....+..++++|.+||+.||++||+++++++|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 279 (282)
T cd07831 219 DAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRH 279 (282)
T ss_pred CHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhC
Confidence 000000 0011235789999999999999999999999998
No 246
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.97 E-value=7.6e-31 Score=308.07 Aligned_cols=249 Identities=18% Similarity=0.203 Sum_probs=193.6
Q ss_pred ceEEEEEeeccCcEEEEEEEEC------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD-- 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~-- 97 (1553)
-|++.+.||+|+||.||+|+.. +..||+|.+... ........+.+|+.+++.+.||||+++++++...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~----~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPE----SGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGG 80 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcc----ccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence 5788999999999999999752 356999998543 1233456788899999999999999999988775
Q ss_pred CEEEEEecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccccc
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTY 175 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~ 175 (1553)
...|+||||++ ++|.+++... ..+++.++..++.||+.||+|||++||+||||||+||+++.++.++|+|||++....
T Consensus 81 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 81 NGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred CceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccc
Confidence 57899999998 5999999654 358999999999999999999999999999999999999999999999999987553
Q ss_pred CCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH--H-------
Q 000410 176 IPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH--L------- 246 (1553)
Q Consensus 176 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~--~------- 246 (1553)
.... .........++..|+|||.+. +..++.++|||||||++|||+++..|+.... .
T Consensus 161 ~~~~----~~~~~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~ 226 (284)
T cd05079 161 TDKE----YYTVKDDLDSPVFWYAPECLI----------QSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPT 226 (284)
T ss_pred cCcc----ceeecCCCCCCccccCHHHhc----------cCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccc
Confidence 2211 111223345667799999764 3457889999999999999999855432110 0
Q ss_pred ---------HH-HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 247 ---------LA-YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 247 ---------~~-~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
.. ...+. ....+...+..+.+||.+||+.||++||++++++++++.
T Consensus 227 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~ 282 (284)
T cd05079 227 HGQMTVTRLVRVLEEGK---RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEA 282 (284)
T ss_pred cccccHHHHHHHHHcCc---cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHh
Confidence 00 01111 111223346789999999999999999999999998764
No 247
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.97 E-value=1.4e-30 Score=303.60 Aligned_cols=255 Identities=20% Similarity=0.236 Sum_probs=199.9
Q ss_pred cceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCC-----cCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDY-----IDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD 97 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~-----~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~ 97 (1553)
++|.+.+.||.|+||+||+|... +..+|+|.+...... .......+.+..|..+++.++||||+++++++...
T Consensus 1 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~ 80 (272)
T cd06629 1 FKWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTE 80 (272)
T ss_pred CceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccC
Confidence 36899999999999999999875 467999988643111 11233445678888999999999999999999999
Q ss_pred CEEEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccC
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~ 176 (1553)
...++||||+. ++|.+++...+.+++..++.++.||+.||.|||++|++||||||+||+++.++.++|+|||.++....
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~ 160 (272)
T cd06629 81 EYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDD 160 (272)
T ss_pred CceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccc
Confidence 99999999998 59999998877899999999999999999999999999999999999999999999999998875421
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HHHHh---c
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LAYRR---G 252 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~~~~---~ 252 (1553)
..... ......++..|+|||.+... ...++.++|+|||||++|+|++|.+||...+. ..+.. .
T Consensus 161 ~~~~~-----~~~~~~~~~~y~~PE~~~~~--------~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~ 227 (272)
T cd06629 161 IYDND-----QNMSMQGSVFWMAPEVIHSY--------SQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNK 227 (272)
T ss_pred ccccc-----ccccccCCccccCHHHhccc--------cCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhcc
Confidence 11100 11223467889999987521 12478899999999999999999988864332 22221 1
Q ss_pred CCC--CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 QYD--PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ~~~--~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... .........+..++++|.+||..||++||+++++++|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 228 RSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred ccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 111 1111222335789999999999999999999999998
No 248
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.97 E-value=9e-31 Score=309.41 Aligned_cols=250 Identities=16% Similarity=0.161 Sum_probs=192.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC------------------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE------------------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHV 87 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~------------------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnI 87 (1553)
+|++.+.||+|+||.||++++.+ ..+|+|++... ........+.+|+.+++.++||||
T Consensus 6 ~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~----~~~~~~~~~~~E~~~l~~l~~~~i 81 (296)
T cd05095 6 RLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED----ANKNARNDFLKEIKIMSRLKDPNI 81 (296)
T ss_pred hceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc----CCHHHHHHHHHHHHHHHhCCCCCc
Confidence 79999999999999999986432 24889988543 123445677888899999999999
Q ss_pred eEEEEEEEeCCEEEEEecccc-CCHHHHhcCCC-----------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcE
Q 000410 88 WAFQFWQETDKAAYLLRQYFF-NSLRDRLSTPP-----------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENV 155 (1553)
Q Consensus 88 v~~~~~~~~~~~~~lV~E~~~-gsL~d~l~~~~-----------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NI 155 (1553)
+++++++..+...|++|||+. ++|.+++.... .+++.++..++.||+.||+|||++|++||||||+||
T Consensus 82 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Ni 161 (296)
T cd05095 82 IRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNC 161 (296)
T ss_pred ceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheE
Confidence 999999999999999999998 69999986532 366788999999999999999999999999999999
Q ss_pred EEecCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHH
Q 000410 156 LVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 235 (1553)
Q Consensus 156 Lv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 235 (1553)
|++.++.++|+|||+++...... .....+...+++.|+|||... ...++.++|||||||++|||+
T Consensus 162 li~~~~~~~l~dfg~~~~~~~~~-----~~~~~~~~~~~~~~~~pe~~~----------~~~~~~~~DiwSlG~~l~el~ 226 (296)
T cd05095 162 LVGKNYTIKIADFGMSRNLYSGD-----YYRIQGRAVLPIRWMSWESIL----------LGKFTTASDVWAFGVTLWEIL 226 (296)
T ss_pred EEcCCCCEEeccCcccccccCCc-----ceeccCcCcCccccCCHHHHh----------cCCccchhhhhHHHHHHHHHH
Confidence 99999999999999987542211 011112223356799999653 346788999999999999999
Q ss_pred c--CCCCCCchHHHHHHh--------cCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 236 L--EVPFFELSHLLAYRR--------GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 236 t--g~~pf~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+ |..||......+... .........+...++.+++|+.+||+.||++||++.++++.++
T Consensus 227 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 227 TLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred HhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 8 677885432222111 1111111122334578999999999999999999999998754
No 249
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.97 E-value=7.4e-31 Score=305.89 Aligned_cols=249 Identities=18% Similarity=0.162 Sum_probs=192.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETD----- 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~----- 97 (1553)
.|++.+.||.|+||.||+|...+ ..||+|++..... . ...+..|..+++.+ +||||+++++++...
T Consensus 7 ~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~----~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 7 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD--E----EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred hhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc--c----HHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 67888999999999999998854 5699999865421 1 23455666788887 699999999988653
Q ss_pred -CEEEEEecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccc
Q 000410 98 -KAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKP 173 (1553)
Q Consensus 98 -~~~~lV~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~ 173 (1553)
...|++|||++ ++|.+++... ..+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||++..
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~ 160 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQ 160 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCcee
Confidence 46899999999 5999998753 3589999999999999999999999999999999999999999999999999875
Q ss_pred ccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHHh-
Q 000410 174 TYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRR- 251 (1553)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~- 251 (1553)
...... ......|++.|+|||.+.... .....++.++||||+||++|||++|.+||.... ......
T Consensus 161 ~~~~~~-------~~~~~~g~~~y~aPE~~~~~~-----~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~ 228 (272)
T cd06637 161 LDRTVG-------RRNTFIGTPYWMAPEVIACDE-----NPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLI 228 (272)
T ss_pred cccccc-------cCCcccccccccCHhHhcccc-----CcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHH
Confidence 421110 112345778899999875321 123467889999999999999999988885322 222211
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.............+..+++||.+||..||.+||+++++++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~ 269 (272)
T cd06637 229 PRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKH 269 (272)
T ss_pred hcCCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhC
Confidence 11111112223445789999999999999999999999998
No 250
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=8.1e-31 Score=309.94 Aligned_cols=245 Identities=16% Similarity=0.136 Sum_probs=196.4
Q ss_pred cceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
.+|++.+.||+|+||.||++.+. ++.||+|.+..... ...+.+.+|..+++.++||||+++++++..++..|+
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l 93 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ-----PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWV 93 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc-----chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEE
Confidence 37999999999999999999874 46799999865421 123456778889999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||++ ++|.+++... .+++.++..++.|++.||.|||+.||+||||||+|||++.++.++|+|||.+........
T Consensus 94 v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~-- 170 (297)
T cd06656 94 VMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 170 (297)
T ss_pred eecccCCCCHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc--
Confidence 999998 5999998654 489999999999999999999999999999999999999999999999998865321110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHh--cC-CCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRR--GQ-YDPSQ 258 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~--~~-~~~~~ 258 (1553)
......+++.|+|||.+. +..++.++|+||+||++|+|++|.+||...+...... .. ..+..
T Consensus 171 -----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~ 235 (297)
T cd06656 171 -----KRSTMVGTPYWMAPEVVT----------RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPEL 235 (297)
T ss_pred -----CcCcccCCccccCHHHHc----------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCC
Confidence 112334678899999764 3456789999999999999999999996543321111 11 11111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+...+..++++|.+||..||++||+++++++|
T Consensus 236 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 236 QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 2233456789999999999999999999999998
No 251
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=4.8e-31 Score=310.05 Aligned_cols=250 Identities=17% Similarity=0.141 Sum_probs=198.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++++. +..||+|.+.... . ......+.+|.++++.++||||+++++.+..++..|+|
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~---~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 77 (286)
T cd06622 2 EIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL---D-ESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMC 77 (286)
T ss_pred hhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc---C-HHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEE
Confidence 5888999999999999999986 4679999886431 1 22335677888999999999999999999999999999
Q ss_pred eccccC-CHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 104 RQYFFN-SLRDRLSTP---PFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 104 ~E~~~g-sL~d~l~~~---~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
|||++| +|..++... ..+++..+.+++.||+.||.|||+ .||+||||||+||+++.++.++|+|||.+......
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 156 (286)
T cd06622 78 MEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS- 156 (286)
T ss_pred EeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC-
Confidence 999995 898888653 368999999999999999999997 59999999999999999999999999988644211
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~ 254 (1553)
...+..+++.|+|||.+.+... .....++.++||||+||++|+|++|..||....... +.....
T Consensus 157 --------~~~~~~~~~~y~aPE~~~~~~~----~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 224 (286)
T cd06622 157 --------LAKTNIGCQSYMAPERIKSGGP----NQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVD 224 (286)
T ss_pred --------ccccCCCccCccCcchhcCCCC----CccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhh
Confidence 1123346778999998753321 123457889999999999999999999996432211 111111
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.....++...+++++++|.+||+.+|++||+++++++|
T Consensus 225 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 225 GDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred cCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 12223344467899999999999999999999999987
No 252
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.97 E-value=7.7e-31 Score=308.67 Aligned_cols=248 Identities=17% Similarity=0.151 Sum_probs=194.2
Q ss_pred cceEEEEEeeccCcEEEEEEEEC-------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD-------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD 97 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~-------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~ 97 (1553)
.+|++.+.||.|+||.||+|.+. ++.||+|++.... .......+.+|+.+++.+.||||+++++++..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~ 80 (288)
T cd05050 5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA----SADMQADFQREAALMAEFDHPNIVKLLGVCAVG 80 (288)
T ss_pred HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc----CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence 37899999999999999999874 3569999986432 133456688888999999999999999999999
Q ss_pred CEEEEEecccc-CCHHHHhcCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCc
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTP----------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCEN 154 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~----------------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~N 154 (1553)
...|++|||++ |+|.+++... ..+++.++..++.||+.||.|||++|++||||||+|
T Consensus 81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n 160 (288)
T cd05050 81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN 160 (288)
T ss_pred CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence 99999999999 6999998632 237788899999999999999999999999999999
Q ss_pred EEEecCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHH
Q 000410 155 VLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAEL 234 (1553)
Q Consensus 155 ILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eL 234 (1553)
||++.++.++|+|||.+.......... .......+..|+|||.+. ...++.++|||||||++|||
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el 225 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYK-----ASENDAIPIRWMPPESIF----------YNRYTTESDVWAYGVVLWEI 225 (288)
T ss_pred eEecCCCceEECccccceecccCcccc-----ccCCCccChhhcCHHHHh----------cCCCCchhHHHHHHHHHHHH
Confidence 999999999999999887543221100 011122345699999653 34678899999999999999
Q ss_pred Hc-CCCCCCchHHHH----HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 235 FL-EVPFFELSHLLA----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 235 lt-g~~pf~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
++ |..||....... +..+... ..+...+..+.+||.+||+.||.+||+++|+++.++
T Consensus 226 ~~~~~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 226 FSYGMQPYYGMAHEEVIYYVRDGNVL---SCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred HhCCCCCCCCCCHHHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 97 776764322222 2222211 123344678999999999999999999999998754
No 253
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.97 E-value=9.8e-31 Score=302.89 Aligned_cols=246 Identities=15% Similarity=0.121 Sum_probs=194.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.+.||+|+||.||+|...+ ..+++|.+.... .. .+.+.+|+.+++.++||||+++++++..+...|+||
T Consensus 7 ~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~--~~----~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (261)
T cd05034 7 SLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT--MS----PEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVT 80 (261)
T ss_pred heeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc--cC----HHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEE
Confidence 79999999999999999998865 459999886432 11 245677889999999999999999999988999999
Q ss_pred cccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ ++|.+++.... .+++.++..++.|++.||.|||++|++||||||+||++++++.++|+|||.+........
T Consensus 81 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~-- 158 (261)
T cd05034 81 EYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY-- 158 (261)
T ss_pred eccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhh--
Confidence 9998 59999997643 589999999999999999999999999999999999999999999999998875422110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhc-CCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRG-QYDPSQH 259 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~-~~~~~~~ 259 (1553)
. .......+..|+|||.+. +..++.++||||+||++|+|++ |++||...+....... .......
T Consensus 159 ---~-~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~ 224 (261)
T cd05034 159 ---T-AREGAKFPIKWTAPEAAN----------YGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYRMP 224 (261)
T ss_pred ---h-hhhccCCCccccCHHHhc----------cCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 0 001112345799999764 3457889999999999999998 8999965433221111 1111111
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.+...+..+++++.+||..||++||+++++++-+
T Consensus 225 ~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l 258 (261)
T cd05034 225 RPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFL 258 (261)
T ss_pred CCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHH
Confidence 2233367899999999999999999999998764
No 254
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.97 E-value=9.6e-31 Score=305.57 Aligned_cols=249 Identities=20% Similarity=0.192 Sum_probs=196.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+|++.+.||.|+||.||+|+... ..+++|.+... ..+.....+.+|+++++.++||||+++++++.+..
T Consensus 6 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 81 (275)
T cd05046 6 NLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKT----KDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE 81 (275)
T ss_pred hceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCc----cchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC
Confidence 78999999999999999999642 45899988543 22335567888889999999999999999999989
Q ss_pred EEEEEecccc-CCHHHHhcCCC---------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeec
Q 000410 99 AAYLLRQYFF-NSLRDRLSTPP---------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF 168 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~~---------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DF 168 (1553)
..|+||||++ |+|.+++.... .+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+||
T Consensus 82 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 82 PHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred cceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999 69999997654 6899999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHH
Q 000410 169 ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLL 247 (1553)
Q Consensus 169 G~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~ 247 (1553)
|+++...... ........++..|+|||.+. +...+.++|||||||++|+|++ |.+||......
T Consensus 162 ~~~~~~~~~~------~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~ 225 (275)
T cd05046 162 SLSKDVYNSE------YYKLRNALIPLRWLAPEAVQ----------EDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDE 225 (275)
T ss_pred ccccccCccc------ccccCCceeEEeecChhhhc----------cCCCCchhhHHHHHHHHHHHHhCCCCCccccchH
Confidence 9876432111 01112233467799999764 3346788999999999999998 68888542222
Q ss_pred HHHhcCC--CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 248 AYRRGQY--DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 248 ~~~~~~~--~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.+..... ......+...+..+.+++.+||+.||++||++.|+++.+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 226 EVLNRLQAGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred HHHHHHHcCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 2211111 1111123345678999999999999999999999998753
No 255
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.97 E-value=9e-31 Score=306.31 Aligned_cols=245 Identities=17% Similarity=0.115 Sum_probs=197.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|+..+.||.|+||.||+|.+.. ..||+|++.... .......+.+|+.+++.+.||||+++++++.++...|+|
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEE----AEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWII 80 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccc----cHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEE
Confidence 57788999999999999998853 569999986542 133456788888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ ++|.+++... .+++.++..++.|++.||+|||++|++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~e~~~~~~L~~~i~~~-~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--- 156 (277)
T cd06640 81 MEYLGGGSALDLLRAG-PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--- 156 (277)
T ss_pred EecCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc---
Confidence 99998 5999998765 489999999999999999999999999999999999999999999999998865421110
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCC-CCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY-DPSQHLE 261 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~-~~~~~~~ 261 (1553)
......++..|+|||.+. +..++.++|+|||||++|||++|.+||............. ...+.+.
T Consensus 157 ----~~~~~~~~~~y~apE~~~----------~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 222 (277)
T cd06640 157 ----KRNTFVGTPFWMAPEVIQ----------QSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNNPPTLT 222 (277)
T ss_pred ----ccccccCcccccCHhHhc----------cCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCCCCCCc
Confidence 111224567799999764 3357889999999999999999999997543322211111 1122233
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+..+.++|.+||+.+|++||+++++++|
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 223 GEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred hhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 3445789999999999999999999999998
No 256
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.97 E-value=1.2e-30 Score=305.95 Aligned_cols=250 Identities=18% Similarity=0.148 Sum_probs=191.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++.+. +..||+|.+.+.... +...+.+.++...++.++||||+++++++..+...|++
T Consensus 2 ~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv 78 (283)
T cd06617 2 DLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNS---QEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWIC 78 (283)
T ss_pred CceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCc---HHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEE
Confidence 6899999999999999999986 467999998654211 12222333333346777999999999999999999999
Q ss_pred eccccCCHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 104 RQYFFNSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEK-GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~-gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
|||++|+|.+++.. ...+++..+..++.||+.||+|||++ +++||||||+||+++.++.+||+|||.+.......
T Consensus 79 ~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~ 158 (283)
T cd06617 79 MEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV 158 (283)
T ss_pred hhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 99999998887743 34689999999999999999999997 99999999999999999999999999986542110
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch--HHHHHHhcCCCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS--HLLAYRRGQYDP 256 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~--~~~~~~~~~~~~ 256 (1553)
......++..|+|||.+.+.. ....++.++|+||+||++|+|++|..||... ....+.......
T Consensus 159 --------~~~~~~~~~~y~aPE~~~~~~------~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~ 224 (283)
T cd06617 159 --------AKTIDAGCKPYMAPERINPEL------NQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEP 224 (283)
T ss_pred --------ccccccCCccccChhhcCCcc------cccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcC
Confidence 011124577899999875321 1245788999999999999999999888631 122222211111
Q ss_pred CCCC-CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 SQHL-EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ~~~~-~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.... ....++++.++|.+||..+|++||+++++++|
T Consensus 225 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 225 SPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred CCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 1112 22346789999999999999999999999987
No 257
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6e-31 Score=314.02 Aligned_cols=248 Identities=22% Similarity=0.263 Sum_probs=194.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-EEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK-AAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~-~~~lV 103 (1553)
+|.-...||+|+||.||+|...+ ..||||.+..... .. .+++..|++++.+++|||++++++||.+.+ ..+||
T Consensus 76 ~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~----~~-~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~~~~LV 150 (361)
T KOG1187|consen 76 NFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSG----QG-EREFLNEVEILSRLRHPNLVKLLGYCLEGGEHRLLV 150 (361)
T ss_pred CCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCC----cc-hhHHHHHHHHHhcCCCcCcccEEEEEecCCceEEEE
Confidence 56666899999999999999988 6799997754321 11 445889999999999999999999999888 59999
Q ss_pred ecccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 104 RQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKG---ICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~g---IvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
+||++ |+|.+++..+. .++|..+..|+.++++||+|||+.. |+||||||+|||+|++..+||+|||+++.. +
T Consensus 151 YEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~--~ 228 (361)
T KOG1187|consen 151 YEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLG--P 228 (361)
T ss_pred EEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccC--C
Confidence 99999 89999997654 7999999999999999999999854 999999999999999999999999999643 1
Q ss_pred CCCCCCcceeeecC-CCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH------HHHH-
Q 000410 178 YDDPSDFSFFFDTG-GKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH------LLAY- 249 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~-~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~------~~~~- 249 (1553)
.. ... ..+. .||.+|+|||.+. .+.++.++||||||+++.||++|+++.+... +..+
T Consensus 229 ~~---~~~--~~~~~~gt~gY~~PEy~~----------~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~ 293 (361)
T KOG1187|consen 229 EG---DTS--VSTTVMGTFGYLAPEYAS----------TGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWA 293 (361)
T ss_pred cc---ccc--eeeecCCCCccCChhhhc----------cCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHH
Confidence 10 111 1122 6899999999653 4678999999999999999999987776321 2222
Q ss_pred ----HhcCCC--CCCCCC-CCCC--H---HHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 250 ----RRGQYD--PSQHLE-KIPD--S---GIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 250 ----~~~~~~--~~~~~~-~~~~--~---~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
..+... ..+.+. ...+ . .+..+..+|++.+|.+||++.|+++.++.
T Consensus 294 ~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~ 351 (361)
T KOG1187|consen 294 KPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEG 351 (361)
T ss_pred HHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHh
Confidence 122111 122222 1111 2 35677889999999999999999888743
No 258
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.97 E-value=1.5e-30 Score=302.02 Aligned_cols=251 Identities=20% Similarity=0.136 Sum_probs=198.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||+|...+ ..+++|++.+... ......+.+|+++++.++||||+++++.+..++..|++
T Consensus 2 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 77 (267)
T cd06610 2 DYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKC----QTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLV 77 (267)
T ss_pred cceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCc----chHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEE
Confidence 68999999999999999998753 5699999865421 12445678888899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCC
Q 000410 104 RQYFF-NSLRDRLSTP---PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~---~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~ 179 (1553)
|||++ ++|.+++... ..+++..+..++.||+.||.|||++||+||||||+||++++++.++|+|||++.....+..
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 78 MPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred EeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 99998 5999998653 4589999999999999999999999999999999999999999999999998876543322
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYD 255 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~ 255 (1553)
... .......++..|+|||.+.. ...++.++|+|||||++|+|++|+.||......+ .......
T Consensus 158 ~~~---~~~~~~~~~~~y~~Pe~~~~---------~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 225 (267)
T cd06610 158 RTR---KVRKTFVGTPCWMAPEVMEQ---------VHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPP 225 (267)
T ss_pred ccc---cccccccCChhhcChHHHcc---------ccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCC
Confidence 210 11123346788999997742 1256889999999999999999999986543222 2222111
Q ss_pred CCCCCC--CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 256 PSQHLE--KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 256 ~~~~~~--~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...... ...++.+.+++.+||..||++||+++++++|
T Consensus 226 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~ 264 (267)
T cd06610 226 SLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKH 264 (267)
T ss_pred CcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 111111 1335789999999999999999999999998
No 259
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.97 E-value=9.1e-31 Score=302.02 Aligned_cols=243 Identities=19% Similarity=0.148 Sum_probs=196.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+.. ..+++|.+.... ..+.+.+|.++++.++||||+++++++.++...|++
T Consensus 4 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-------~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~ 76 (256)
T cd06612 4 VFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEE-------DLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIV 76 (256)
T ss_pred cchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHH-------HHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEE
Confidence 78999999999999999999864 679999985431 156788888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
+||++ ++|.+++.. ...+++.++..++.|++.||.|||+.|++||||+|+||+++.++.++|+|||++........
T Consensus 77 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-- 154 (256)
T cd06612 77 MEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-- 154 (256)
T ss_pred EecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc--
Confidence 99999 599999864 45689999999999999999999999999999999999999999999999999876532211
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCC---CCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY---DPSQ 258 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~---~~~~ 258 (1553)
......++..|+|||.+. +..++.++||||+||++|+|++|.+||............. ....
T Consensus 155 -----~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 219 (256)
T cd06612 155 -----KRNTVIGTPFWMAPEVIQ----------EIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTL 219 (256)
T ss_pred -----ccccccCCccccCHHHHh----------cCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCC
Confidence 011223577899999764 3357889999999999999999999986543222111111 1111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+...+..+.++|.+||+.||++||++.|+++|
T Consensus 220 ~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~ 253 (256)
T cd06612 220 SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253 (256)
T ss_pred CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcC
Confidence 1223345789999999999999999999999987
No 260
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.97 E-value=4.8e-31 Score=308.55 Aligned_cols=255 Identities=20% Similarity=0.269 Sum_probs=203.4
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~~~~l 102 (1553)
+|.+.+.||+|+||.||++... +..|++|++.+... ......+.+.+|.++++.+. ||||+++++++..++..|+
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~l 79 (280)
T cd05581 2 DFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQL--IKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYF 79 (280)
T ss_pred CceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhc--cchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEE
Confidence 6899999999999999999885 46799999876421 12233466778889999998 9999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||||++ ++|.+++.+.+.+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++..........
T Consensus 80 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~ 159 (280)
T cd05581 80 VLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPE 159 (280)
T ss_pred EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccc
Confidence 999996 7999999888889999999999999999999999999999999999999999999999999887553322110
Q ss_pred CC-------------cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH
Q 000410 182 SD-------------FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA 248 (1553)
Q Consensus 182 ~~-------------~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~ 248 (1553)
.. .........++..|+|||.+. ...++.++|||||||+++++++|.+||.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~----------~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~ 229 (280)
T cd05581 160 SNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLN----------EKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYL 229 (280)
T ss_pred cCCCCCccccccccccccccccccCCccccCHHHhC----------CCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHH
Confidence 00 001122334678899999764 2347889999999999999999999997554332
Q ss_pred HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCH----HHHHHh
Q 000410 249 YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA----ESYLQN 292 (1553)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa----~elL~~ 292 (1553)
..+........++...++.+.++|.+||+.||.+||++ +++++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~ 277 (280)
T cd05581 230 TFQKILKLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAH 277 (280)
T ss_pred HHHHHHhcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcC
Confidence 22211122223444446789999999999999999999 999988
No 261
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=1.2e-30 Score=308.15 Aligned_cols=244 Identities=17% Similarity=0.161 Sum_probs=196.3
Q ss_pred cceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
.+|++.+.||.|+||.||++.+. ++.|++|.+..... ...+.+.+|..+++.++||||+++++++......|+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 93 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ-----PKKELIINEILVMKELKNPNIVNFLDSFLVGDELFV 93 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC-----chHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEE
Confidence 37999999999999999999874 46799999865421 123456778889999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|+||+. ++|.+++... .+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++........
T Consensus 94 v~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~-- 170 (296)
T cd06655 94 VMEYLAGGSLTDVVTET-CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS-- 170 (296)
T ss_pred EEEecCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc--
Confidence 999999 5898888755 489999999999999999999999999999999999999999999999998775421110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH----HHHhcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----AYRRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~----~~~~~~~~~~ 257 (1553)
......++..|+|||.+. ...++.++|||||||++|+|++|.+||...+.. ....... +.
T Consensus 171 -----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~-~~ 234 (296)
T cd06655 171 -----KRSTMVGTPYWMAPEVVT----------RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT-PE 234 (296)
T ss_pred -----cCCCcCCCccccCcchhc----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCC-cc
Confidence 112234677899999764 345678999999999999999999999754322 1222211 11
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+...++.++++|.+||..||.+||++.++++|
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 235 LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 12233446789999999999999999999999998
No 262
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=3.3e-31 Score=334.04 Aligned_cols=249 Identities=17% Similarity=0.135 Sum_probs=183.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECCc---eEEEEE--------------EeccCCCcCHHHHHHHHHHHHHHHhcCCCCCee
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEG---LVLVKV--------------YFKRGDYIDLREYERRLFHIRETFRSIDHPHVW 88 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~---~vavKv--------------~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv 88 (1553)
+|++.+.||+|+||+||+|..+.. ..++|. +.+. ..........+.+|+.+|+.++||||+
T Consensus 149 ~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~--~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 149 HFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKR--VKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred ccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHH--hhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 699999999999999999876431 122221 1111 011123455678899999999999999
Q ss_pred EEEEEEEeCCEEEEEeccccCCHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcE
Q 000410 89 AFQFWQETDKAAYLLRQYFFNSLRDRLSTP-----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWL 163 (1553)
Q Consensus 89 ~~~~~~~~~~~~~lV~E~~~gsL~d~l~~~-----~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~v 163 (1553)
+++++++..+..|+|++++.++|.+++... ......+++.|+.||+.||+|||++||+||||||+|||++.++.+
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~v 306 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKI 306 (501)
T ss_pred cEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCE
Confidence 999999999999999999999999887543 223466788899999999999999999999999999999999999
Q ss_pred EEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCC-CCCC
Q 000410 164 YLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV-PFFE 242 (1553)
Q Consensus 164 kL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~-~pf~ 242 (1553)
||+|||+++....... .......|++.|+|||++. +..++.++|||||||++|||++|. +||.
T Consensus 307 kL~DFGla~~~~~~~~------~~~~~~~gt~~y~aPE~~~----------~~~~~~~~DiwSlGvil~ell~~~~~p~~ 370 (501)
T PHA03210 307 VLGDFGTAMPFEKERE------AFDYGWVGTVATNSPEILA----------GDGYCEITDIWSCGLILLDMLSHDFCPIG 370 (501)
T ss_pred EEEeCCCceecCcccc------cccccccCCcCCCCchhhc----------CCCCCcHHHHHHHHHHHHHHHHCCCCCcc
Confidence 9999999876522111 1112345789999999764 345788999999999999999984 4553
Q ss_pred ch------HHHHHHhcCCCCCC-----------------------CC-----CCCCCHHHHHHHHHhcccCcCCCCCHHH
Q 000410 243 LS------HLLAYRRGQYDPSQ-----------------------HL-----EKIPDSGIRKMILHMIQLEPELRFSAES 288 (1553)
Q Consensus 243 ~~------~~~~~~~~~~~~~~-----------------------~~-----~~~~~~~l~~LI~~mL~~dP~~Rpsa~e 288 (1553)
.. ++.+.......... .+ ....+..+.++|.+||+.||++|||+.|
T Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~e 450 (501)
T PHA03210 371 DGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAE 450 (501)
T ss_pred CCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHH
Confidence 21 11111110000000 00 0012456788899999999999999999
Q ss_pred HHHh
Q 000410 289 YLQN 292 (1553)
Q Consensus 289 lL~~ 292 (1553)
+|+|
T Consensus 451 lL~h 454 (501)
T PHA03210 451 LLAL 454 (501)
T ss_pred HhhC
Confidence 9998
No 263
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.97 E-value=1.7e-30 Score=302.18 Aligned_cols=252 Identities=14% Similarity=0.085 Sum_probs=194.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--c---eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--G---LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~---~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~ 100 (1553)
+|+..+.||+|+||.||+|+... + .+++|.+.... .....+.+..|+++++.++||||+++++++...+..
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (268)
T cd05063 6 HITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY----TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPA 81 (268)
T ss_pred HceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC----CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCc
Confidence 78889999999999999998752 2 58888875431 123345677888999999999999999999999999
Q ss_pred EEEecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 101 YLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
|+||||++ ++|.+++.. .+.+++.++..++.|++.||+|||++|++||||||+||+++.++.++|+|||++.......
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 161 (268)
T cd05063 82 MIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDP 161 (268)
T ss_pred EEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceeccccc
Confidence 99999999 599999865 3568999999999999999999999999999999999999999999999999886542211
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCCC-C
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQYD-P 256 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~~-~ 256 (1553)
. . .........+..|+|||.+. ...++.++|||||||++|||++ |..||.............. .
T Consensus 162 ~--~--~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~ 227 (268)
T cd05063 162 E--G--TYTTSGGKIPIRWTAPEAIA----------YRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF 227 (268)
T ss_pred c--c--ceeccCCCcCceecCHHHhh----------cCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC
Confidence 1 0 01111112245699999764 3357889999999999999997 8888854332222111111 1
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
........+..+.+++.+||+.||++||++.++++.+..
T Consensus 228 ~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~ 266 (268)
T cd05063 228 RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDK 266 (268)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHh
Confidence 111122345789999999999999999999999988754
No 264
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.97 E-value=1.7e-30 Score=304.35 Aligned_cols=251 Identities=16% Similarity=0.141 Sum_probs=198.3
Q ss_pred cceEEEEEeeccCcEEEEEEEECC------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
.+|++.+.||+|+||.||+|.+.. ..+++|++.+.. .......+.+|+.+++.++||||+++++++.. .
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 81 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET----SPKANKEILDEAYVMASVDHPHVVRLLGICLS-S 81 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C
Confidence 378999999999999999998642 248888875542 23455667888899999999999999999887 6
Q ss_pred EEEEEecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccC
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~ 176 (1553)
..++||||+. |+|.+++... ..+++..+..++.||+.||+|||++||+||||||+||+++.++.+||+|||.++....
T Consensus 82 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 82 QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred ceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 7899999998 6999999763 4689999999999999999999999999999999999999999999999999876532
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCCC
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQYD 255 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~~ 255 (1553)
... ........++..|+|||.+. ...++.++|+||+||++|||++ |.+||.......+......
T Consensus 162 ~~~-----~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~ 226 (279)
T cd05057 162 DEK-----EYHAEGGKVPIKWMALESIL----------HRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEK 226 (279)
T ss_pred ccc-----ceecCCCcccccccCHHHhh----------cCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhC
Confidence 111 11112223356799999663 3457889999999999999998 8999976444332221111
Q ss_pred -CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 256 -PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 256 -~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
.....+...+..+.+++.+||..||++||++.++++.+..
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~ 267 (279)
T cd05057 227 GERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSK 267 (279)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 1122344556789999999999999999999999988653
No 265
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.97 E-value=8.3e-31 Score=302.36 Aligned_cols=242 Identities=15% Similarity=0.158 Sum_probs=193.6
Q ss_pred cceEEEEEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
.+|++.+.||+|+||.||++...+..||+|++... .....+.+|+.+++.++||||+++++++..+ ..|++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~iK~~~~~-------~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~ 77 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEYTGQKVAVKNIKCD-------VTAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVM 77 (254)
T ss_pred HHceeeeeeccCCCCceEecccCCCceEEEeecCc-------chHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEE
Confidence 37999999999999999999988888999998542 1234567788899999999999999998655 479999
Q ss_pred cccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||+. ++|.+++...+ .+++..+..++.|++.||.|||++|++||||||+||+++.++.++|+|||.+.......
T Consensus 78 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~--- 154 (254)
T cd05083 78 ELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV--- 154 (254)
T ss_pred ECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccC---
Confidence 9999 59999997543 48899999999999999999999999999999999999999999999999887542111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCC-CCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQY-DPSQH 259 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~-~~~~~ 259 (1553)
.....+..|+|||.+. ...++.++|+|||||++|||++ |.+||............. .....
T Consensus 155 -------~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~ 217 (254)
T cd05083 155 -------DNSKLPVKWTAPEALK----------HKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYRME 217 (254)
T ss_pred -------CCCCCCceecCHHHhc----------cCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCCCC
Confidence 1122345699999663 3457889999999999999997 899997554433221111 11111
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.....++.+.+++.+||+.+|++||+++++++.++
T Consensus 218 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 218 PPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 23344678999999999999999999999998764
No 266
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.97 E-value=9.2e-31 Score=303.12 Aligned_cols=246 Identities=15% Similarity=0.108 Sum_probs=191.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.+.||+|+||.||+|...+ ..+|+|.+..... . .+.+.+|+.+++.++||||+++++++.. ...|++|
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~--~----~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~ 79 (260)
T cd05070 7 SLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM--S----PESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVT 79 (260)
T ss_pred HhhhhheeccccCceEEEEEecCCceeEEEEecCCCC--C----HHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEE
Confidence 68999999999999999998765 5699998865321 1 2346778899999999999999998754 5689999
Q ss_pred cccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ ++|.+++... ..+++.++..++.|++.||.|||++||+||||||+||++++++.++|+|||.+........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~-- 157 (260)
T cd05070 80 EYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY-- 157 (260)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc--
Confidence 9998 5999998653 3489999999999999999999999999999999999999999999999999865421110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCC-CCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQY-DPSQH 259 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~-~~~~~ 259 (1553)
. ......++..|+|||.+. ...++.++|||||||++|+|++ |.+||............. .....
T Consensus 158 ---~-~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~ 223 (260)
T cd05070 158 ---T-ARQGAKFPIKWTAPEAAL----------YGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYRMP 223 (260)
T ss_pred ---c-cccCCCCCccccChHHHh----------cCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 0 011122355699999763 3457889999999999999999 799996543322211111 11122
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.+...+..+++++.+||..||++|||++++++-++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 258 (260)
T cd05070 224 CPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLE 258 (260)
T ss_pred CCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 34455678999999999999999999999987543
No 267
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.97 E-value=6.9e-31 Score=313.24 Aligned_cols=252 Identities=20% Similarity=0.253 Sum_probs=193.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--CE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD--KA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~--~~ 99 (1553)
+|.+.+.||+|+||.||+|.+.. ..||+|++..... ........+.+|+.+++.++||||+++++++.+. ..
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 78 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKE--QYTGISQSACREIALLRELKHENVVSLVEVFLEHADKS 78 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccc--cccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCce
Confidence 47889999999999999999844 6799999976421 1122334456777899999999999999999888 88
Q ss_pred EEEEeccccCCHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec----CCcEEEeecCc
Q 000410 100 AYLLRQYFFNSLRDRLST-----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS----WNWLYLSDFAS 170 (1553)
Q Consensus 100 ~~lV~E~~~gsL~d~l~~-----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~----~~~vkL~DFG~ 170 (1553)
.|+||||++++|.+.+.. ...+++..++.++.||+.||.|||++||+||||||+|||++. ++.+||+|||+
T Consensus 79 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~ 158 (316)
T cd07842 79 VYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGL 158 (316)
T ss_pred EEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence 999999999988887742 236899999999999999999999999999999999999999 89999999998
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH--
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-- 248 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-- 248 (1553)
++........ ........+++.|+|||.+.+ ...++.++|||||||++|+|++|.+||.......
T Consensus 159 ~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~ 225 (316)
T cd07842 159 ARLFNAPLKP----LADLDPVVVTIWYRAPELLLG---------ARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKK 225 (316)
T ss_pred ccccCCCccc----ccccCCccccccccCHHHHhC---------CCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccc
Confidence 8755332211 111123346788999997642 2356889999999999999999999996322110
Q ss_pred -----------HHhc----------------CC------CCCCCCC-----------CCCCHHHHHHHHHhcccCcCCCC
Q 000410 249 -----------YRRG----------------QY------DPSQHLE-----------KIPDSGIRKMILHMIQLEPELRF 284 (1553)
Q Consensus 249 -----------~~~~----------------~~------~~~~~~~-----------~~~~~~l~~LI~~mL~~dP~~Rp 284 (1553)
+... .+ ......+ ...+..+.++|.+||+.||++||
T Consensus 226 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp 305 (316)
T cd07842 226 SNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRI 305 (316)
T ss_pred cchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCc
Confidence 0000 00 0000011 13456789999999999999999
Q ss_pred CHHHHHHh
Q 000410 285 SAESYLQN 292 (1553)
Q Consensus 285 sa~elL~~ 292 (1553)
|+.|+++|
T Consensus 306 s~~eil~~ 313 (316)
T cd07842 306 TAEEALEH 313 (316)
T ss_pred CHHHHhcC
Confidence 99999998
No 268
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.97 E-value=7.4e-31 Score=320.99 Aligned_cols=249 Identities=16% Similarity=0.185 Sum_probs=194.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~ 97 (1553)
+|.+.+.||+|+||.||+|++.+ ..||+|++..... ....+.+.+|++++..+. ||||+++++++...
T Consensus 38 ~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~----~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~ 113 (401)
T cd05107 38 NLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR----SSEKQALMSELKIMSHLGPHLNIVNLLGACTKG 113 (401)
T ss_pred HeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC----hhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccC
Confidence 68888999999999999998642 4699999965421 222345778889999997 99999999999999
Q ss_pred CEEEEEecccc-CCHHHHhcCC----------------------------------------------------------
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTP---------------------------------------------------------- 118 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~---------------------------------------------------------- 118 (1553)
+..|+||||+. |+|.+++...
T Consensus 114 ~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (401)
T cd05107 114 GPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQ 193 (401)
T ss_pred CCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchh
Confidence 99999999999 6999998542
Q ss_pred ----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEe
Q 000410 119 ----------------------------------------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 158 (1553)
Q Consensus 119 ----------------------------------------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~ 158 (1553)
+.+++..+..|+.||+.||.|||++||+||||||+|||++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~ 273 (401)
T cd05107 194 DMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLIC 273 (401)
T ss_pred cchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEe
Confidence 2366778889999999999999999999999999999999
Q ss_pred cCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-C
Q 000410 159 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E 237 (1553)
Q Consensus 159 ~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g 237 (1553)
.++.+||+|||+++......... ......+++.|+|||.+. ...++.++|||||||++|||++ |
T Consensus 274 ~~~~~kL~DfGla~~~~~~~~~~-----~~~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslGvil~e~l~~g 338 (401)
T cd05107 274 EGKLVKICDFGLARDIMRDSNYI-----SKGSTFLPLKWMAPESIF----------NNLYTTLSDVWSFGILLWEIFTLG 338 (401)
T ss_pred CCCEEEEEecCcceecccccccc-----cCCCcCCCCceeChHHhc----------CCCCCcHhHHHHHHHHHHHHHHcC
Confidence 99999999999987542111100 011223567799999764 3357889999999999999998 7
Q ss_pred CCCCCchHH----HHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 238 VPFFELSHL----LAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 238 ~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
..||..... ......... ...+...+..+.+|+.+||..+|.+||+++++++.++.
T Consensus 339 ~~P~~~~~~~~~~~~~~~~~~~--~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~ 398 (401)
T cd05107 339 GTPYPELPMNEQFYNAIKRGYR--MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGD 398 (401)
T ss_pred CCCCCCCCchHHHHHHHHcCCC--CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 888864321 122222221 12334456789999999999999999999999998764
No 269
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.97 E-value=1.4e-30 Score=299.44 Aligned_cols=244 Identities=16% Similarity=0.116 Sum_probs=190.5
Q ss_pred EEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-
Q 000410 31 EVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF- 108 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~- 108 (1553)
+.||+|+||.||+|...+ ..+|+|++.... .......+.+|.++++.++||||+++++++......++||||++
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 76 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDL----PQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPG 76 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcC----CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCC
Confidence 368999999999998765 569999875431 23344567788899999999999999999999999999999998
Q ss_pred CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 109 NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 109 gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
++|.+++.. ...+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++........ ..
T Consensus 77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~------~~ 150 (250)
T cd05085 77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIY------SS 150 (250)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceecccccc------cc
Confidence 699998865 34589999999999999999999999999999999999999999999999998864321100 00
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHh-cCCCCCCCCCCCCC
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRR-GQYDPSQHLEKIPD 265 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~ 265 (1553)
.....++..|+|||.+. ...++.++|||||||++|+|++ |..||.......... .........+...+
T Consensus 151 ~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (250)
T cd05085 151 SGLKQIPIKWTAPEALN----------YGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYRMSCPQKCP 220 (250)
T ss_pred CCCCCCcccccCHHHhc----------cCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence 11123356699999764 3457889999999999999998 888986543322211 11111112233446
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 266 SGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 266 ~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
..+.+++.+||..+|++||++.++++.+.
T Consensus 221 ~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 221 DDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 78999999999999999999999998753
No 270
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.97 E-value=8.2e-31 Score=305.13 Aligned_cols=250 Identities=17% Similarity=0.176 Sum_probs=186.6
Q ss_pred EEeeccCcEEEEEEEECC----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecc
Q 000410 31 EVLGGSRFFKSILCKHDE----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQY 106 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~ 106 (1553)
+.||+|+||+||+|.... ..+++|.+... ........+.+|+..++.++||||+++++.+......|+||||
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~ 76 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRAS----ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEF 76 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCcc----CChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEe
Confidence 368999999999997543 34777766432 1233445677788899999999999999999999999999999
Q ss_pred cc-CCHHHHhcCCC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 107 FF-NSLRDRLSTPP-----FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 107 ~~-gsL~d~l~~~~-----~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
++ |+|.+++.... ..++.....++.||+.||+|||++||+||||||+|||++.++.+||+|||++......
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~--- 153 (269)
T cd05042 77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPE--- 153 (269)
T ss_pred CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccc---
Confidence 99 69999986532 2467788899999999999999999999999999999999999999999987643211
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHH----HHH-hcCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLL----AYR-RGQY 254 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~----~~~-~~~~ 254 (1553)
..........+++.|+|||.+...... .....++.++|||||||++|||++ |.+||...... ... ....
T Consensus 154 --~~~~~~~~~~~~~~y~aPE~~~~~~~~---~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~ 228 (269)
T cd05042 154 --DYYITKDCHAVPLRWLAPELVEIRGQD---LLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDI 228 (269)
T ss_pred --hheeccCCCCCcccccCHHHHhhcccc---ccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCc
Confidence 000111223345679999987533211 123467889999999999999999 68888643221 111 1111
Q ss_pred C-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 255 D-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 255 ~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
. +.+.++...++.+.+++..|+ .||++||+++++++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 229 KLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred cCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 1 223344456678899999998 5999999999999764
No 271
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.97 E-value=3.6e-30 Score=280.26 Aligned_cols=304 Identities=20% Similarity=0.299 Sum_probs=247.3
Q ss_pred CCCcccCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcE
Q 000410 1122 DSGWRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1201 (1553)
Q Consensus 1122 ~~~W~p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~ 1201 (1553)
.+.|...-++-+.+.+|.++|.|+++.|.+.+|+|||.|+|+||||+.++. -.+++.+|...|..+++++-..+
T Consensus 134 rPeWHapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~------LkltltGhi~~vr~vavS~rHpY 207 (460)
T KOG0285|consen 134 RPEWHAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQ------LKLTLTGHIETVRGVAVSKRHPY 207 (460)
T ss_pred CccccCcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCe------EEEeecchhheeeeeeecccCce
Confidence 346776678899999999999999999999999999999999999999886 56788899999999999998899
Q ss_pred EEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCccc
Q 000410 1202 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1281 (1553)
Q Consensus 1202 las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~ 1281 (1553)
+.+|+.|+.|+.||++.. .+.....+|-..|.+++.+|. -.+|++|+.|.++++||+|+...+
T Consensus 208 lFs~gedk~VKCwDLe~n--------------kvIR~YhGHlS~V~~L~lhPT---ldvl~t~grDst~RvWDiRtr~~V 270 (460)
T KOG0285|consen 208 LFSAGEDKQVKCWDLEYN--------------KVIRHYHGHLSGVYCLDLHPT---LDVLVTGGRDSTIRVWDIRTRASV 270 (460)
T ss_pred EEEecCCCeeEEEechhh--------------hhHHHhccccceeEEEecccc---ceeEEecCCcceEEEeeecccceE
Confidence 999999999999999841 122233456778999999998 569999999999999999999999
Q ss_pred ceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEE
Q 000410 1282 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVA 1361 (1553)
Q Consensus 1282 ~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~ 1361 (1553)
.++.+ |..+|.++.+.|-.-.+++||.|++|++||+|.++....+.+ |...+.+++. +|... .++++
T Consensus 271 ~~l~G--H~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~-hkksvral~l-hP~e~---------~fASa 337 (460)
T KOG0285|consen 271 HVLSG--HTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTH-HKKSVRALCL-HPKEN---------LFASA 337 (460)
T ss_pred EEecC--CCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeec-ccceeeEEec-CCchh---------hhhcc
Confidence 99977 999999999999888999999999999999999998888876 6677888888 77654 45555
Q ss_pred EcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccC
Q 000410 1362 AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1441 (1553)
Q Consensus 1362 s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~s 1441 (1553)
+. ..|+-|++..|...+-+. +|..-|+++...
T Consensus 338 s~-dnik~w~~p~g~f~~nls-----------------------------------------------gh~~iintl~~n 369 (460)
T KOG0285|consen 338 SP-DNIKQWKLPEGEFLQNLS-----------------------------------------------GHNAIINTLSVN 369 (460)
T ss_pred CC-ccceeccCCccchhhccc-----------------------------------------------cccceeeeeeec
Confidence 44 458999999886543332 233468888888
Q ss_pred CCCeEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccC
Q 000410 1442 PGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAG 1521 (1553)
Q Consensus 1442 p~g~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 1521 (1553)
.||.+++||+.|.|.+||.+++-+=+-.... + +| ..+.
T Consensus 370 sD~v~~~G~dng~~~fwdwksg~nyQ~~~t~---------------------v-----qp----------------GSl~ 407 (460)
T KOG0285|consen 370 SDGVLVSGGDNGSIMFWDWKSGHNYQRGQTI---------------------V-----QP----------------GSLE 407 (460)
T ss_pred cCceEEEcCCceEEEEEecCcCccccccccc---------------------c-----cC----------------Cccc
Confidence 9999999999999999999865321111000 0 00 0010
Q ss_pred CCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1522 CHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1522 ~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
-...|.+. +|+..|..|+||..|.+|++||
T Consensus 408 -sEagI~as-~fDktg~rlit~eadKtIk~~k 437 (460)
T KOG0285|consen 408 -SEAGIFAS-CFDKTGSRLITGEADKTIKMYK 437 (460)
T ss_pred -cccceeEE-eecccCceEEeccCCcceEEEe
Confidence 23467777 7888899999999999999997
No 272
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.97 E-value=5.4e-31 Score=309.22 Aligned_cols=248 Identities=20% Similarity=0.299 Sum_probs=193.9
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|+..+.||.|+||.||+|++. +..|+||++...... ......+.+|+++++.++||||+++++++.+++..|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 77 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTET---EGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV 77 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccc---cccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEE
Confidence 4788999999999999999885 367999988644211 12334577788999999999999999999999999999
Q ss_pred eccccCCHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFFNSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||+.++|.+++.. ...+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||.+.........
T Consensus 78 ~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~- 156 (284)
T cd07860 78 FEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT- 156 (284)
T ss_pred eeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccc-
Confidence 99999999998855 345899999999999999999999999999999999999999999999999988654222110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH----HHHhcCCCC-
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----AYRRGQYDP- 256 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~----~~~~~~~~~- 256 (1553)
.....+++.|+|||.+.+ ...++.++|||||||++|||++|.+||...... .+.+....+
T Consensus 157 ------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~ 221 (284)
T cd07860 157 ------YTHEVVTLWYRAPEILLG---------CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 221 (284)
T ss_pred ------cccccccccccCCeEEec---------CCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 122235678999997642 234578899999999999999999998643221 111100000
Q ss_pred ---------------------C---CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 ---------------------S---QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ---------------------~---~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
. .......++.++++|.+||+.||.+||+++++++|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~ 281 (284)
T cd07860 222 EVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAH 281 (284)
T ss_pred hhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcC
Confidence 0 00112345788999999999999999999999988
No 273
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.97 E-value=1.2e-30 Score=302.69 Aligned_cols=245 Identities=15% Similarity=0.097 Sum_probs=191.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.++||+|+||.||+|++.+ ..|++|++.+... ..+.+.+|..+++.++||||+++++++.. ...|+||
T Consensus 7 ~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~------~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~ 79 (262)
T cd05071 7 SLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVT 79 (262)
T ss_pred HeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc------CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEE
Confidence 69999999999999999998865 4699999865321 12356778899999999999999998754 4579999
Q ss_pred cccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ |+|.+++... ..+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||.+.........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~- 158 (262)
T cd05071 80 EYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT- 158 (262)
T ss_pred EcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccc-
Confidence 9999 5999999753 35889999999999999999999999999999999999999999999999988754221110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcC-CCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQ-YDPSQH 259 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~-~~~~~~ 259 (1553)
......++..|+|||... ...++.++|||||||++|||++ |.+||............ ......
T Consensus 159 -----~~~~~~~~~~y~~PE~~~----------~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~ 223 (262)
T cd05071 159 -----ARQGAKFPIKWTAPEAAL----------YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMP 223 (262)
T ss_pred -----cccCCcccceecCHhHhc----------cCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCCCC
Confidence 111233466799999653 3467889999999999999999 68899654322221111 111111
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.....++.+.++|.+||+.||++||+++++++-+
T Consensus 224 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l 257 (262)
T cd05071 224 CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFL 257 (262)
T ss_pred CccccCHHHHHHHHHHccCCcccCCCHHHHHHHH
Confidence 2233467899999999999999999999998764
No 274
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.97 E-value=1.3e-30 Score=303.76 Aligned_cols=249 Identities=20% Similarity=0.160 Sum_probs=194.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCC----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDK---- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~---- 98 (1553)
+|++.+.||.|+||.||+|.+.. ..+++|++.... .....+.+|..+++.+ .||||+++++++....
T Consensus 7 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~------~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (275)
T cd06608 7 IFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE------DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGN 80 (275)
T ss_pred heeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc------hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCc
Confidence 79999999999999999999854 569999986542 1234577888889988 6999999999986544
Q ss_pred --EEEEEecccc-CCHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcc
Q 000410 99 --AAYLLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASF 171 (1553)
Q Consensus 99 --~~~lV~E~~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a 171 (1553)
..|+||||++ ++|.+++.. +..+++.++..++.|++.||.|||++|++||||+|+||+++.++.++|+|||.+
T Consensus 81 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~ 160 (275)
T cd06608 81 DDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVS 160 (275)
T ss_pred ceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccc
Confidence 5899999999 599888754 346899999999999999999999999999999999999999999999999988
Q ss_pred ccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHH
Q 000410 172 KPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYR 250 (1553)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~ 250 (1553)
........ ......++..|+|||.+..... ....++.++|||||||++|+|++|.+||.... .....
T Consensus 161 ~~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~~-----~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 228 (275)
T cd06608 161 AQLDSTLG-------RRNTFIGTPYWMAPEVIACDEQ-----PDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALF 228 (275)
T ss_pred eecccchh-------hhcCccccccccCHhHhccccc-----ccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHH
Confidence 65421111 1123346788999998753321 23467889999999999999999999986432 22222
Q ss_pred hcCCCCCCC--CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 251 RGQYDPSQH--LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 251 ~~~~~~~~~--~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
......... .+...+..++++|.+||..||++|||++++++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~ 272 (275)
T cd06608 229 KIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEH 272 (275)
T ss_pred HhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 211111111 112245689999999999999999999999987
No 275
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.97 E-value=1.3e-30 Score=309.99 Aligned_cols=248 Identities=20% Similarity=0.259 Sum_probs=192.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--CEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD--KAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~--~~~~ 101 (1553)
+|++.+.||.|+||.||+|.+. +..||+|++...... ......+.+|+.+++.++||||+++++++... +..|
T Consensus 8 ~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (309)
T cd07845 8 EFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNER---DGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIF 84 (309)
T ss_pred ceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCC---CCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEE
Confidence 7999999999999999999985 467999998654211 11122345677899999999999999998755 5689
Q ss_pred EEeccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+||||+.++|.+++.. +..+++.++..++.||+.||.|||++|++||||||+||+++.++.+||+|||.+.........
T Consensus 85 lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~ 164 (309)
T cd07845 85 LVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKP 164 (309)
T ss_pred EEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCC
Confidence 9999999999988865 356899999999999999999999999999999999999999999999999998765322110
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----HhcC---
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQ--- 253 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~--- 253 (1553)
.....+++.|+|||.+.+ ...++.++||||+||++|||++|.+||........ ....
T Consensus 165 -------~~~~~~~~~y~aPE~~~~---------~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~ 228 (309)
T cd07845 165 -------MTPKVVTLWYRAPELLLG---------CTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTP 228 (309)
T ss_pred -------CCcccccccccChhhhcC---------CCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 111224677999997642 23568899999999999999999999964432211 1100
Q ss_pred ----------------CCCC-CCC------CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 ----------------YDPS-QHL------EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ----------------~~~~-~~~------~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+... ... ....++.+.++|.+||+.||++|||++++++|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 229 NESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred ChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000 000 01236788999999999999999999999998
No 276
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.97 E-value=1.6e-30 Score=302.71 Aligned_cols=251 Identities=15% Similarity=0.138 Sum_probs=195.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~ 100 (1553)
+|++.+.||+|+||.||+|.+.. ..|++|++.+.. .......+..|..+++.++||||+++++++.++...
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 80 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY----TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPV 80 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC----CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCce
Confidence 68999999999999999998753 249999985431 233456788899999999999999999999999999
Q ss_pred EEEecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 101 YLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
++||||++ ++|.+++.. .+.+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||.+.......
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~ 160 (269)
T cd05065 81 MIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDT 160 (269)
T ss_pred EEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCc
Confidence 99999999 599999875 3568999999999999999999999999999999999999999999999999886542211
Q ss_pred CCCCCcceeeecCC--CCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCC-
Q 000410 179 DDPSDFSFFFDTGG--KRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQY- 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~--gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~- 254 (1553)
..+ . +..... .+..|+|||.+. ...++.++||||+||++|||++ |.+||.............
T Consensus 161 ~~~---~-~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~ 226 (269)
T cd05065 161 SDP---T-YTSSLGGKIPIRWTAPEAIA----------YRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQ 226 (269)
T ss_pred ccc---c-cccccCCCcceeecCHhHhc----------cCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHc
Confidence 111 1 111111 234699999764 3457889999999999999886 888886443322221111
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
......+...+..+.+++.+||+.+|.+||++++++..+.
T Consensus 227 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 266 (269)
T cd05065 227 DYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLD 266 (269)
T ss_pred CCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence 1111122234568999999999999999999999998764
No 277
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.97 E-value=1.6e-30 Score=302.90 Aligned_cols=247 Identities=17% Similarity=0.176 Sum_probs=194.3
Q ss_pred cceEEEEEeeccCcEEEEEEEECC-----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE-----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~-----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~ 99 (1553)
.+|++.+.||.|+||.||+|.+.+ ..|++|.+.... .....+.+.+|+.+++.++||||+++++++.++ .
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~----~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~-~ 80 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT----SPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN-P 80 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC----CHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC-C
Confidence 478999999999999999998743 258889885432 134456778888999999999999999988764 5
Q ss_pred EEEEecccc-CCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
.|+||||++ |+|.+++.... .+++..+..++.|++.||+|||++|++||||||+|||++.++.++|+|||+++.....
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence 789999998 69999997643 5899999999999999999999999999999999999999999999999988754221
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH----HHhc
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA----YRRG 252 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~----~~~~ 252 (1553)
. ........++..|+|||.+. ...++.++|||||||++|||++ |.+||....... +..+
T Consensus 161 ~------~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~ 224 (270)
T cd05056 161 S------YYKASKGKLPIKWMAPESIN----------FRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENG 224 (270)
T ss_pred c------ceecCCCCccccccChhhhc----------cCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcC
Confidence 0 01111222345799999653 3457889999999999999986 999996543222 2222
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 253 QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 253 ~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
... ..+...+..+.++|.+|+..+|++||++.++++.+..
T Consensus 225 ~~~---~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~ 264 (270)
T cd05056 225 ERL---PMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSD 264 (270)
T ss_pred CcC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 211 2233446789999999999999999999999988653
No 278
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.97 E-value=1.3e-30 Score=301.89 Aligned_cols=244 Identities=16% Similarity=0.146 Sum_probs=192.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.++||+|+||.||+|...+ ..||+|.+.... .. ...+.+|..+++.++||||+++++++. ++..|++|
T Consensus 7 ~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~--~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~ 79 (260)
T cd05067 7 TLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS--MS----PEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIIT 79 (260)
T ss_pred HceeeeeeccCccceEEeeecCCCceEEEEEecCCC--Cc----HHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEE
Confidence 78999999999999999998865 569999986432 11 235667888999999999999999874 45689999
Q ss_pred cccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||+. ++|.+++... ..+++.++..++.|++.||+|||++|++||||||+||+++.++.++|+|||.+.........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~- 158 (260)
T cd05067 80 EYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYT- 158 (260)
T ss_pred EcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcc-
Confidence 9998 6999998653 35889999999999999999999999999999999999999999999999988654211110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHH---hcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYR---RGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~---~~~~~~~ 257 (1553)
......++..|+|||.+. ...++.++|||||||++|||++ |++||......... .....
T Consensus 159 -----~~~~~~~~~~y~~pe~~~----------~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-- 221 (260)
T cd05067 159 -----AREGAKFPIKWTAPEAIN----------YGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYR-- 221 (260)
T ss_pred -----cccCCcccccccCHHHhc----------cCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCC--
Confidence 011223456799999764 3457889999999999999998 89999654332221 11111
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
...+...+..+.++|.+||..+|++||+++++++.++
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 258 (260)
T cd05067 222 MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLE 258 (260)
T ss_pred CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhh
Confidence 1233445678999999999999999999999998654
No 279
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.97 E-value=2.1e-30 Score=299.24 Aligned_cols=247 Identities=21% Similarity=0.259 Sum_probs=197.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.+|+++... +.|++|.+..... . ......+.+|+.+++.++||||++++++++..+..|+|
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~--~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKM--S-PKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIV 77 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhC--C-hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEE
Confidence 48899999999999999998853 6799999865421 1 22335677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+||+. ++|.+++... ..+++.++..++.|++.||.|||++|++|+||+|+|||++.++.++|+|||.+........
T Consensus 78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~- 156 (256)
T cd08218 78 MDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE- 156 (256)
T ss_pred EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh-
Confidence 99998 5999998653 2478999999999999999999999999999999999999999999999998875422111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhc-CCCCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRG-QYDPSQH 259 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~-~~~~~~~ 259 (1553)
......+++.|+|||.+. +..++.++|+||+||++|+|++|..||........... .......
T Consensus 157 ------~~~~~~~~~~~~~pe~~~----------~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 220 (256)
T cd08218 157 ------LARTCIGTPYYLSPEICE----------NRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPP 220 (256)
T ss_pred ------hhhhccCCccccCHHHhC----------CCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCC
Confidence 111234677899999764 34567899999999999999999988875543322211 1111112
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+...+..+.++|.+||+.+|++||++.++++|
T Consensus 221 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 221 VSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred CcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 334456789999999999999999999999998
No 280
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.97 E-value=4.5e-31 Score=306.35 Aligned_cols=244 Identities=18% Similarity=0.158 Sum_probs=197.8
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||++.+. +..+++|.+.+... ......+.+|+++++.+.||||+++++.+..++..|++
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 77 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN----EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISIC 77 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC----hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEE
Confidence 5778899999999999999997 46799999866421 24456677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+||++ ++|.+++... ..+++..+..++.|++.||.|||+ .|++||||||+||+++.++.++|+|||.+.....+..
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~- 156 (265)
T cd06605 78 MEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA- 156 (265)
T ss_pred EEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh-
Confidence 99999 6999999765 678999999999999999999999 9999999999999999999999999998865422111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch-----HHHHHHh-cCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS-----HLLAYRR-GQY 254 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~-----~~~~~~~-~~~ 254 (1553)
....++..|+|||.+. +..++.++||||+||++|+|++|.+||... ......+ ...
T Consensus 157 --------~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 218 (265)
T cd06605 157 --------KTFVGTSSYMAPERIQ----------GNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVN 218 (265)
T ss_pred --------hcccCChhccCHHHHc----------CCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhc
Confidence 0134677899999764 336788999999999999999998888543 2222211 111
Q ss_pred CCCCCCCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 DPSQHLEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ~~~~~~~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+..+. ..++.++++|.+||..||++||++.++++|
T Consensus 219 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 219 EPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 11222222 256789999999999999999999999998
No 281
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.97 E-value=2.5e-30 Score=299.71 Aligned_cols=246 Identities=24% Similarity=0.235 Sum_probs=201.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|++|.||+|.+.+ +.|++|++..... ......+.+|...++.++||||+++++++..+...|+|
T Consensus 2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 77 (264)
T cd06623 2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGD----EEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIV 77 (264)
T ss_pred cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcc----hHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEE
Confidence 68899999999999999999864 6799999866522 14556788888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||++ ++|.+++.....+++..+..++.|++.||.|||+ +|++||||+|+||+++.++.++|+|||.+.........
T Consensus 78 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~- 156 (264)
T cd06623 78 LEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ- 156 (264)
T ss_pred EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCc-
Confidence 99999 6999999887789999999999999999999999 99999999999999999999999999988765322111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH---HHHHH-hcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH---LLAYR-RGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~---~~~~~-~~~~~~~ 257 (1553)
.....++..|+|||.+. ...++.++|+|||||++|+|++|.+||.... ..... .......
T Consensus 157 ------~~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~ 220 (264)
T cd06623 157 ------CNTFVGTVTYMSPERIQ----------GESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPP 220 (264)
T ss_pred ------ccceeecccccCHhhhC----------CCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCC
Confidence 11234577899999764 2367889999999999999999999986542 22211 1111222
Q ss_pred CCCCCC-CCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKI-PDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~-~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..++.. .+..+.++|.+||..+|++||++++++++
T Consensus 221 ~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 221 PSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred CCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 223333 56789999999999999999999999997
No 282
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=6.7e-31 Score=308.58 Aligned_cols=244 Identities=18% Similarity=0.155 Sum_probs=197.4
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++.+. +..||+|++.... .....+.+.+|+++++.++||||+++++++......|+|
T Consensus 6 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 81 (284)
T cd06620 6 DLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA----KSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMC 81 (284)
T ss_pred HHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC----cchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEE
Confidence 6888999999999999999986 4569999886542 233456788889999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||++ ++|.+++...+.+++..+..++.|++.||.|||+ +|++||||||+||+++.++.++|+|||++.......
T Consensus 82 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~--- 158 (284)
T cd06620 82 MEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI--- 158 (284)
T ss_pred EecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc---
Confidence 99999 5999999887779999999999999999999997 699999999999999999999999999876431111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-----------HHHH
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-----------LAYR 250 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-----------~~~~ 250 (1553)
.....++..|+|||.+. ...++.++||||+||++|+|++|.+||..... ....
T Consensus 159 ------~~~~~~~~~~~aPE~~~----------~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~ 222 (284)
T cd06620 159 ------ADTFVGTSTYMSPERIQ----------GGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLL 222 (284)
T ss_pred ------cCccccCcccCCHHHHc----------cCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHH
Confidence 11235788899999764 23677899999999999999999999964322 1111
Q ss_pred hcC-CCCCCCCCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 251 RGQ-YDPSQHLEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 251 ~~~-~~~~~~~~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... ......++. ..+..+.+||.+||+.||++||+++|++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 223 QQIVQEPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred HHHhhccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 111 111111221 245689999999999999999999999987
No 283
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.97 E-value=1.9e-30 Score=300.66 Aligned_cols=247 Identities=21% Similarity=0.273 Sum_probs=197.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE--eCCEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQE--TDKAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~--~~~~~~ 101 (1553)
+|++.+.||.|+||.||++.+.. +.+++|++..... .....+++..|+++++.++||||+++++++. .....|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 77 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNM---TEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLY 77 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccC---CHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEE
Confidence 48889999999999999998854 5699998865421 2334456778889999999999999998775 345689
Q ss_pred EEecccc-CCHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHH-----HCCCeecCCCCCcEEEecCCcEEEeecCcc
Q 000410 102 LLRQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCH-----EKGICHGDIKCENVLVTSWNWLYLSDFASF 171 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH-----~~gIvHrDIKp~NILv~~~~~vkL~DFG~a 171 (1553)
++|||++ ++|.+++.. ...+++.++..++.||+.||.||| +.+++||||||+||+++.++.++|+|||++
T Consensus 78 ~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~ 157 (265)
T cd08217 78 IVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA 157 (265)
T ss_pred EEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccc
Confidence 9999998 599998854 356899999999999999999999 999999999999999999999999999998
Q ss_pred ccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHh
Q 000410 172 KPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRR 251 (1553)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~ 251 (1553)
....... .......+++.|+|||.+. ...++.++|+||||+++|+|++|..||.......+.+
T Consensus 158 ~~~~~~~-------~~~~~~~~~~~~~~pE~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~ 220 (265)
T cd08217 158 KILGHDS-------SFAKTYVGTPYYMSPEQLN----------HMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLAS 220 (265)
T ss_pred ccccCCc-------ccccccccCCCccChhhhc----------CCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHH
Confidence 7653211 1122345788899999764 2347889999999999999999999997654333322
Q ss_pred cCCC-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 GQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ~~~~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.... ....++...+..+.+++.+||+.+|++||++.++++|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 221 KIKEGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHhcCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 2111 1223444556789999999999999999999999998
No 284
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.97 E-value=5.6e-31 Score=309.34 Aligned_cols=248 Identities=21% Similarity=0.313 Sum_probs=194.1
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+. +..||+|++.+.... ....+.+.+|.++++.++||||+++++++..++..|+|
T Consensus 2 ~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 78 (286)
T cd07846 2 KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDD---KMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLV 78 (286)
T ss_pred ceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCc---chhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEE
Confidence 6889999999999999999986 367999998654221 23345567788999999999999999999999999999
Q ss_pred eccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+++ .|.++......+++.+++.++.||+.||.|||++|++||||+|+||++++++.++|+|||++........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--- 155 (286)
T cd07846 79 FEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE--- 155 (286)
T ss_pred EecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc---
Confidence 999996 6666666555689999999999999999999999999999999999999999999999998875422211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHh--cC---
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRR--GQ--- 253 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~--~~--- 253 (1553)
......++.+|+|||.+.+ ...++.++||||+||++|||++|.+||....... +.. +.
T Consensus 156 ----~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (286)
T cd07846 156 ----VYTDYVATRWYRAPELLVG---------DTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIP 222 (286)
T ss_pred ----ccCcccceeeccCcHHhcc---------ccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCch
Confidence 1122345788999997742 2346788999999999999999999996433211 110 00
Q ss_pred ---------------CCCCC-------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 ---------------YDPSQ-------HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ---------------~~~~~-------~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+.. ......+..+.+|+.+||+.||++||++.++++|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 283 (286)
T cd07846 223 RHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHH 283 (286)
T ss_pred hhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcC
Confidence 00000 0011235679999999999999999999999988
No 285
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.97 E-value=1.9e-30 Score=298.70 Aligned_cols=245 Identities=17% Similarity=0.145 Sum_probs=192.3
Q ss_pred EEeeccCcEEEEEEEEC-CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-
Q 000410 31 EVLGGSRFFKSILCKHD-EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF- 108 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~-~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~- 108 (1553)
+.||.|+||.||+|.+. ++.|++|.+..... ......+..|+++++.++||||+++++++.+....|+||||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~ 76 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLP----PDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPG 76 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCC----HHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCC
Confidence 46899999999999986 46799998865421 2445678888899999999999999999999999999999998
Q ss_pred CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 109 NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 109 gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
++|.+++.. ...+++..+..++.|++.||.|||++|++||||||+|||++.++.++|+|||.++...... +...
T Consensus 77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~-----~~~~ 151 (251)
T cd05041 77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGI-----YTVS 151 (251)
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCc-----ceec
Confidence 599999865 3458899999999999999999999999999999999999999999999999987542110 0000
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCC-CCCCCCCCCCC
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQY-DPSQHLEKIPD 265 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~-~~~~~~~~~~~ 265 (1553)
......+..|+|||.+. +..++.++|||||||++|||++ |.+||............. ......+...+
T Consensus 152 ~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (251)
T cd05041 152 DGLKQIPIKWTAPEALN----------YGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCP 221 (251)
T ss_pred cccCcceeccCChHhhc----------cCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCCCCCCCccCC
Confidence 01122345699999764 3457889999999999999999 688886543322221111 11112334456
Q ss_pred HHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 266 SGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 266 ~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
..+.+++.+||+.+|.+||+++|+++.+.
T Consensus 222 ~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 222 EEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 78999999999999999999999998764
No 286
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.97 E-value=3.7e-30 Score=298.92 Aligned_cols=249 Identities=18% Similarity=0.167 Sum_probs=197.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||+|.+. +..|++|.+..... ......+.+.+|+++++.++|+||+++++++..++..++|
T Consensus 3 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv 80 (267)
T cd08224 3 NFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEM--MDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIV 80 (267)
T ss_pred ceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccc--cchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 6899999999999999999986 46799998864321 1123356678888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 104 RQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
|||++ ++|.+++.. ...+++.++..++.||+.||.|||++||+||||||+||+++.++.++|+|||.+.......
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~ 160 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC
Confidence 99999 599988853 3458999999999999999999999999999999999999999999999999876442111
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH--HHHH----Hhc
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH--LLAY----RRG 252 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~--~~~~----~~~ 252 (1553)
.. .....+++.|+|||.+. +..++.++|+||+||++|+|++|..||.... .... ..+
T Consensus 161 ~~-------~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 223 (267)
T cd08224 161 TA-------AHSLVGTPYYMSPERIH----------ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKC 223 (267)
T ss_pred cc-------cceecCCccccCHHHhc----------cCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcC
Confidence 10 11223577899999764 3457889999999999999999988885432 1111 222
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 253 QYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 253 ~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
...+ ......+..++++|.+||..+|++||++.++++.++.
T Consensus 224 ~~~~--~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~ 264 (267)
T cd08224 224 DYPP--LPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKE 264 (267)
T ss_pred CCCC--CChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHH
Confidence 2211 1122445689999999999999999999999987653
No 287
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.97 E-value=1.3e-30 Score=300.72 Aligned_cols=245 Identities=18% Similarity=0.162 Sum_probs=195.2
Q ss_pred EEEEEeeccCcEEEEEEEECC------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEE
Q 000410 28 VLKEVLGGSRFFKSILCKHDE------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 28 ~~~~~LG~G~fg~V~~a~~~~------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
++.+.||.|+||.||+|.+.+ ..||+|++.... .....+.+..|...++.++||||+++++++.+.+..|
T Consensus 2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 77 (258)
T smart00219 2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA----DEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLM 77 (258)
T ss_pred cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC----ChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeE
Confidence 567899999999999999875 569999985431 1224556778889999999999999999999999999
Q ss_pred EEecccc-CCHHHHhcCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
++|||++ ++|.+++..... +++.++..++.|++.||++||++|++||||||+||++++++.++|+|||.+.......
T Consensus 78 ~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (258)
T smart00219 78 IVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDD 157 (258)
T ss_pred EEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceeccccc
Confidence 9999998 599999976543 8999999999999999999999999999999999999999999999999987653221
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHh-cCCCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRR-GQYDP 256 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~-~~~~~ 256 (1553)
.. ......+++.|+|||.+. ...++.++||||+||++|+|++ |.+||.......+.. .....
T Consensus 158 ~~------~~~~~~~~~~y~~Pe~~~----------~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~ 221 (258)
T smart00219 158 YY------KKKGGKLPIRWMAPESLK----------DGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGY 221 (258)
T ss_pred cc------ccccCCCcccccChHHhc----------cCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCC
Confidence 10 001122567899999663 3457889999999999999998 689987544333221 11111
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
....+...+..+.+++.+||..||++|||+.|+++.
T Consensus 222 ~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 257 (258)
T smart00219 222 RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEI 257 (258)
T ss_pred CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhh
Confidence 122333456789999999999999999999999875
No 288
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=1.7e-30 Score=305.99 Aligned_cols=252 Identities=21% Similarity=0.239 Sum_probs=198.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-----CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-----~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~ 99 (1553)
+|++.+.||.|+||.||+|+.. +..||+|++.+... .......+.+.+|+.+++.+ +||||++++++++.+..
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~ 79 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATI-VQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTK 79 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhh-hhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCe
Confidence 4788999999999999999873 46699999865311 12223445667788899999 59999999999999999
Q ss_pred EEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
.|+||||++ ++|.+++..+..+++.++..++.||+.||.|||++|++||||||+|||++.++.++|+|||++.......
T Consensus 80 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 159 (290)
T cd05613 80 LHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDE 159 (290)
T ss_pred EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceeccccc
Confidence 999999999 5999999887789999999999999999999999999999999999999999999999999887542111
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch----HHHHHHhcCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS----HLLAYRRGQY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~----~~~~~~~~~~ 254 (1553)
.. ......|+..|+|||.+.. ....++.++||||+||++|+|++|.+||... ....+.....
T Consensus 160 ~~------~~~~~~~~~~y~aPE~~~~--------~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~ 225 (290)
T cd05613 160 VE------RAYSFCGTIEYMAPDIVRG--------GDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRIL 225 (290)
T ss_pred cc------ccccccCCcccCChhhccC--------CCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhh
Confidence 00 1112346788999997642 1234678899999999999999999998632 2222322222
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
......+...++.+.+++.+||+.||++|| +++++++|
T Consensus 226 ~~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~ 268 (290)
T cd05613 226 KSEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKH 268 (290)
T ss_pred ccCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcC
Confidence 222233445567899999999999999997 88999987
No 289
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.97 E-value=1.2e-30 Score=302.68 Aligned_cols=234 Identities=18% Similarity=0.163 Sum_probs=183.3
Q ss_pred EEeeccCcEEEEEEEECC--------------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe
Q 000410 31 EVLGGSRFFKSILCKHDE--------------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET 96 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--------------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~ 96 (1553)
+.||+|+||.||+|+... ..|++|++... .......+.+|..+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-----~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~ 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS-----HRDISLAFFETASMMRQVSHKHIVLLYGVCVR 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh-----hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence 468999999999997531 24788876432 23344567778889999999999999999999
Q ss_pred CCEEEEEecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCc-------EEEee
Q 000410 97 DKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNW-------LYLSD 167 (1553)
Q Consensus 97 ~~~~~lV~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~-------vkL~D 167 (1553)
+...++||||++ |+|..++.. ...+++..+..++.||+.||+|||++||+||||||+|||++.++. ++++|
T Consensus 76 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d 155 (262)
T cd05077 76 DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSD 155 (262)
T ss_pred CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence 889999999999 588888764 356899999999999999999999999999999999999987664 89999
Q ss_pred cCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHH-cCCCCCCchHH
Q 000410 168 FASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF-LEVPFFELSHL 246 (1553)
Q Consensus 168 FG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl-tg~~pf~~~~~ 246 (1553)
||.+...... ....++..|+|||.+. ....++.++|||||||++|||+ .|.+||.....
T Consensus 156 ~g~~~~~~~~-----------~~~~~~~~y~aPE~~~---------~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~ 215 (262)
T cd05077 156 PGIPITVLSR-----------QECVERIPWIAPECVE---------DSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL 215 (262)
T ss_pred CCCCccccCc-----------ccccccccccChhhhc---------CCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch
Confidence 9987644211 1233567799999763 1345788999999999999997 57888875443
Q ss_pred HHHH---hcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 247 LAYR---RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 247 ~~~~---~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.... ..... .....++++++||.+||+.||++||++.++++++
T Consensus 216 ~~~~~~~~~~~~----~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 216 AEKERFYEGQCM----LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred hHHHHHHhcCcc----CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 3222 22211 1112246799999999999999999999999874
No 290
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.97 E-value=1.5e-30 Score=300.66 Aligned_cols=243 Identities=16% Similarity=0.117 Sum_probs=192.0
Q ss_pred EEeeccCcEEEEEEEECC---c--eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEec
Q 000410 31 EVLGGSRFFKSILCKHDE---G--LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQ 105 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~---~--~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E 105 (1553)
+.||+|+||.||+|.+.. . .||+|.+.... .....+.+.+|..++++++||||+++++++.. ...++|||
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e 75 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDK----LSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTE 75 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcc----cHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEE
Confidence 468999999999998743 2 48999886542 11566778889999999999999999999988 88999999
Q ss_pred ccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 106 YFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 106 ~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|++ ++|.+++..+. .+++..+..++.|++.||+|||++|++||||||+||+++.++.+||+|||+++.......
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~--- 152 (257)
T cd05040 76 LAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED--- 152 (257)
T ss_pred ecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecccccccccccccc---
Confidence 998 69999997654 589999999999999999999999999999999999999999999999999876532211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHH---HhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY---RRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~---~~~~~~~~~ 258 (1553)
.........++..|+|||.+. ...++.++|||||||++|||++ |.+||........ ..... ...
T Consensus 153 -~~~~~~~~~~~~~y~~pE~~~----------~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~-~~~ 220 (257)
T cd05040 153 -HYVMEEHLKVPFAWCAPESLR----------TRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEG-ERL 220 (257)
T ss_pred -ceecccCCCCCceecCHHHhc----------ccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcC-CcC
Confidence 111111234567899999764 3457889999999999999998 9999854322221 11111 111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
..+...+..+.+++.+||+.+|++||++.++++.+
T Consensus 221 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l 255 (257)
T cd05040 221 ERPEACPQDIYNVMLQCWAHNPADRPTFAALREFL 255 (257)
T ss_pred CCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHh
Confidence 22334467899999999999999999999999875
No 291
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.97 E-value=1.9e-30 Score=299.52 Aligned_cols=246 Identities=15% Similarity=0.128 Sum_probs=194.8
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|++.+.||.|+||.||++.+. ++.+++|++.... .. ...+..|.++++.++||||++++++++.....|+||
T Consensus 5 ~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~--~~----~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 78 (256)
T cd05112 5 ELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA--MS----EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVF 78 (256)
T ss_pred HeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC--CC----HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEE
Confidence 7899999999999999999886 4679999885431 11 234667888999999999999999999999999999
Q ss_pred cccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||+. ++|.+++... +.+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||.+........
T Consensus 79 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--- 155 (256)
T cd05112 79 EFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY--- 155 (256)
T ss_pred EcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcc---
Confidence 9999 5999998653 4589999999999999999999999999999999999999999999999998865421110
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCCC-CCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQYD-PSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~~-~~~~~ 260 (1553)
. ......++..|+|||.+. ...++.++|||||||++|||++ |.+||.............. .....
T Consensus 156 --~-~~~~~~~~~~~~aPe~~~----------~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 222 (256)
T cd05112 156 --T-SSTGTKFPVKWSSPEVFS----------FSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYK 222 (256)
T ss_pred --c-ccCCCccchhhcCHhHhc----------cCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCC
Confidence 0 011112346799999764 3457789999999999999998 8999975543322221111 11123
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+...+..+.+|+.+||+.+|++||++.++++++
T Consensus 223 ~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 223 PRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 345578999999999999999999999999874
No 292
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=1.5e-30 Score=304.42 Aligned_cols=240 Identities=18% Similarity=0.221 Sum_probs=191.5
Q ss_pred eeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-C
Q 000410 33 LGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF-N 109 (1553)
Q Consensus 33 LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~-g 109 (1553)
||+|+||+||+|.+. +..|++|++.+.. .........+..|.++++.++||||++++++++..+..|+||||++ +
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~--~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKR--LKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGG 78 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhh--hhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCC
Confidence 699999999999875 4679999987542 1112234455678899999999999999999999999999999999 5
Q ss_pred CHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 110 SLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 110 sL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
+|.+++.... .+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||.+....... .
T Consensus 79 ~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~--------~ 150 (277)
T cd05577 79 DLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK--------K 150 (277)
T ss_pred cHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC--------c
Confidence 9999987654 68999999999999999999999999999999999999999999999999876542110 1
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HHHHhcCCCCCCCCCCC
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRGQYDPSQHLEKI 263 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~~~~~~~~~~~~~~~~ 263 (1553)
.....++..|+|||.+. +..++.++||||+||++|+|++|+.||..... ..+...........+..
T Consensus 151 ~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (277)
T cd05577 151 IKGRAGTPGYMAPEVLQ----------GEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDK 220 (277)
T ss_pred cccccCCCCcCCHHHhc----------CCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCcc
Confidence 12234567899999764 23478899999999999999999999964322 22333322223334445
Q ss_pred CCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 264 PDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 264 ~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
.++.++++|.+||+.||.+|| ++.++++|
T Consensus 221 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h 254 (277)
T cd05577 221 FSPEAKDLCEALLQKDPEKRLGCRGGSADEVREH 254 (277)
T ss_pred CCHHHHHHHHHHccCChhHccCCCcccHHHHHhC
Confidence 578999999999999999999 88889887
No 293
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.97 E-value=2e-30 Score=304.02 Aligned_cols=250 Identities=19% Similarity=0.136 Sum_probs=192.9
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEE------
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQE------ 95 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~------ 95 (1553)
..|++.+.||.|+||.||+|++.. ..+|+|++.... .....+..|..+++.+ +||||+++++++.
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~------~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 89 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE------DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPG 89 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh------HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccC
Confidence 378999999999999999999854 569999986531 2224466677788887 6999999999884
Q ss_pred eCCEEEEEecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccc
Q 000410 96 TDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 96 ~~~~~~lV~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~ 172 (1553)
.....|++|||++ |+|.+++... ..+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||.+.
T Consensus 90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~ 169 (282)
T cd06636 90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSA 169 (282)
T ss_pred CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchh
Confidence 3467899999999 5999988653 348888899999999999999999999999999999999999999999999876
Q ss_pred cccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHHh
Q 000410 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRR 251 (1553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~ 251 (1553)
........ .....+++.|+|||.+.... .....++.++|+|||||++|||++|.+||.... ...+..
T Consensus 170 ~~~~~~~~-------~~~~~~~~~y~aPE~l~~~~-----~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~ 237 (282)
T cd06636 170 QLDRTVGR-------RNTFIGTPYWMAPEVIACDE-----NPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL 237 (282)
T ss_pred hhhccccC-------CCcccccccccCHhhcCccc-----CcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh
Confidence 54221111 12234678899999875321 124467889999999999999999998885332 222211
Q ss_pred cCCC-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 GQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ~~~~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.... .........+..+.++|.+||+.||.+||++.|+++|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~ 279 (282)
T cd06636 238 IPRNPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKH 279 (282)
T ss_pred HhhCCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcC
Confidence 1111 1112223456789999999999999999999999988
No 294
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=2.2e-31 Score=331.67 Aligned_cols=253 Identities=18% Similarity=0.230 Sum_probs=191.4
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe-------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET------- 96 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~------- 96 (1553)
+|+..+.||+||||.||+++.+ +..||||.+..+. .......+.+|+..|++|+|||||+||..+.+
T Consensus 480 DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~----s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 480 DFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA----SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch----HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 5666789999999999999985 5679999986652 34556678899999999999999999754310
Q ss_pred --------------------------------------------------------------------------------
Q 000410 97 -------------------------------------------------------------------------------- 96 (1553)
Q Consensus 97 -------------------------------------------------------------------------------- 96 (1553)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------C--------CEEEEEeccccC-CHHHHhcCCCCC-CHHHHHHHHHHHHHHHHHHHH
Q 000410 97 ------------------------D--------KAAYLLRQYFFN-SLRDRLSTPPFL-SLVEKKWLAFQLLLAVKQCHE 142 (1553)
Q Consensus 97 ------------------------~--------~~~~lV~E~~~g-sL~d~l~~~~~l-~~~~~~~i~~Qll~aL~~LH~ 142 (1553)
+ ..+||-||||+. .|.+++..+.+. ...+.+.+++||++||.|+|+
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~ 715 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHD 715 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHh
Confidence 0 136899999995 566666666554 477889999999999999999
Q ss_pred CCCeecCCCCCcEEEecCCcEEEeecCcccccc------CC----C-CCCCCcceeeecCCCCccccCcchhcccCCccc
Q 000410 143 KGICHGDIKCENVLVTSWNWLYLSDFASFKPTY------IP----Y-DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQ 211 (1553)
Q Consensus 143 ~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~------~~----~-~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~ 211 (1553)
+|||||||||.||++++++.|||+|||+++... .. . ...+....-.+...||.-|+|||++.+..
T Consensus 716 ~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~---- 791 (1351)
T KOG1035|consen 716 QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS---- 791 (1351)
T ss_pred CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc----
Confidence 999999999999999999999999999998621 00 0 01111111234456889999999986432
Q ss_pred cccCCCCCCcccHHHHHHHHHHHHcCCCCCCch-----HHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCH
Q 000410 212 VAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS-----HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA 286 (1553)
Q Consensus 212 ~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa 286 (1553)
...|+.|+|+||||+|++||+. ||.-+ .+..++.+..+....+..-.-+.-..+|++||+.||++||||
T Consensus 792 ---~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA 865 (1351)
T KOG1035|consen 792 ---SNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTA 865 (1351)
T ss_pred ---cccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCH
Confidence 2479999999999999999994 36422 233445555543322232223456899999999999999999
Q ss_pred HHHHHh
Q 000410 287 ESYLQN 292 (1553)
Q Consensus 287 ~elL~~ 292 (1553)
.|+|+.
T Consensus 866 ~eLL~s 871 (1351)
T KOG1035|consen 866 TELLNS 871 (1351)
T ss_pred HHHhhc
Confidence 999986
No 295
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.97 E-value=2.6e-30 Score=298.16 Aligned_cols=246 Identities=23% Similarity=0.287 Sum_probs=197.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.... ..+++|.+..... . ......+.+|.++++.++||||+++++.+..++..++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv 77 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQM--T-KDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIV 77 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEecccc--c-cHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEE
Confidence 48899999999999999998853 6699999875421 1 22346688889999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC-cEEEeecCccccccCCCC
Q 000410 104 RQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-WLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~-~vkL~DFG~a~~~~~~~~ 179 (1553)
|||++ ++|.+++... ..+++.++..++.|++.||+|||++||+||||||+||+++.++ .++|+|||.+........
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (256)
T cd08220 78 MEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK 157 (256)
T ss_pred EecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc
Confidence 99998 5999999763 3489999999999999999999999999999999999998654 689999999876532211
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcC-CCCCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQ-YDPSQ 258 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~-~~~~~ 258 (1553)
.....++..|+|||.+. ...++.++|+||+||++|+|++|..||...+........ .....
T Consensus 158 --------~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (256)
T cd08220 158 --------AYTVVGTPCYISPELCE----------GKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA 219 (256)
T ss_pred --------ccccccCCcccCchhcc----------CCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC
Confidence 11234677899999763 345678999999999999999999999765443322111 11122
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.++...++.++++|.+||..||++|||++|+++|
T Consensus 220 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 220 PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 2334456789999999999999999999999988
No 296
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.97 E-value=1.6e-30 Score=303.03 Aligned_cols=243 Identities=15% Similarity=0.099 Sum_probs=187.2
Q ss_pred EEeeccCcEEEEEEEECC--c--eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEEEec
Q 000410 31 EVLGGSRFFKSILCKHDE--G--LVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYLLRQ 105 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--~--~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~lV~E 105 (1553)
+.||+|+||.||+|+..+ . .+++|.+... ......+.+..|+++++.+ +||||+++++++......|++||
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e 76 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY----ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE 76 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEcccc----CCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEE
Confidence 368999999999998854 2 3677877532 1223445677888899989 79999999999999999999999
Q ss_pred ccc-CCHHHHhcCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeec
Q 000410 106 YFF-NSLRDRLSTPP----------------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF 168 (1553)
Q Consensus 106 ~~~-gsL~d~l~~~~----------------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DF 168 (1553)
|++ |+|.+++.... .+++.++.+++.|++.||+|||++|++||||||+|||++.++.+||+||
T Consensus 77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCC
Confidence 998 69999986532 4789999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHH
Q 000410 169 ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLL 247 (1553)
Q Consensus 169 G~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~ 247 (1553)
|++...... .. ......+..|+|||.+. ...++.++|||||||++|||++ |.+||......
T Consensus 157 gl~~~~~~~---~~-----~~~~~~~~~y~apE~~~----------~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~ 218 (270)
T cd05047 157 GLSRGQEVY---VK-----KTMGRLPVRWMAIESLN----------YSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA 218 (270)
T ss_pred CCccccchh---hh-----ccCCCCccccCChHHHc----------cCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH
Confidence 987532100 00 01112345699999763 3457889999999999999997 88898654332
Q ss_pred HHHhcC-CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 248 AYRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 248 ~~~~~~-~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
...... .......+...+..+.+++.+||..||.+||+++++++.+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~ 267 (270)
T cd05047 219 ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNR 267 (270)
T ss_pred HHHHHHhCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHH
Confidence 221111 111112233456789999999999999999999999998653
No 297
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=4.3e-30 Score=305.30 Aligned_cols=247 Identities=19% Similarity=0.183 Sum_probs=196.9
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|...+.||+|+||.||+|.+. ++.|++|++..... ...+..+.+.+|+++++.++||||+++++++.+++..|+|
T Consensus 16 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv 93 (307)
T cd06607 16 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK--QSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLV 93 (307)
T ss_pred hhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEecccc--CcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEE
Confidence 5889999999999999999885 46799999864421 2233445677888999999999999999999999999999
Q ss_pred eccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+.|+|.+.+.. ...+++.++..++.||+.||.|||++||+||||+|+||+++.++.++|+|||++......
T Consensus 94 ~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~----- 168 (307)
T cd06607 94 MEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA----- 168 (307)
T ss_pred HHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC-----
Confidence 99999999888753 456899999999999999999999999999999999999999999999999988643111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH-HhcCC-CCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY-RRGQY-DPSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~-~~~~~-~~~~~~ 260 (1553)
....+++.|+|||.+... ....++.++||||+||++|||++|.+||........ ..... ......
T Consensus 169 ------~~~~~~~~y~aPE~~~~~-------~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 235 (307)
T cd06607 169 ------NSFVGTPYWMAPEVILAM-------DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLS 235 (307)
T ss_pred ------CCccCCccccCceeeecc-------CCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCCCCC
Confidence 123456789999977421 234578899999999999999999888865433221 11111 111111
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
....+..++++|.+||+.||++||++.++++|
T Consensus 236 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 236 SNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred chhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 22345789999999999999999999999987
No 298
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.97 E-value=5.1e-31 Score=308.33 Aligned_cols=245 Identities=17% Similarity=0.112 Sum_probs=195.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|+..+.||+|+||.||+|.+.. ..||+|++.... .....+.+.+|+++++.++||||+++++++..+...|+|
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEE----AEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWII 80 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEecccc----chHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEE
Confidence 35667889999999999998753 569999886441 233456788889999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||++ ++|.+++... .+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++........
T Consensus 81 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--- 156 (277)
T cd06642 81 MEYLGGGSALDLLKPG-PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI--- 156 (277)
T ss_pred EEccCCCcHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcch---
Confidence 99999 5999988654 589999999999999999999999999999999999999999999999998865421110
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcC-CCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQ-YDPSQHLE 261 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~-~~~~~~~~ 261 (1553)
......++..|+|||.+. +..++.++|+|||||++|||++|.+||............ ......+.
T Consensus 157 ----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 222 (277)
T cd06642 157 ----KRNTFVGTPFWMAPEVIK----------QSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLE 222 (277)
T ss_pred ----hhhcccCcccccCHHHhC----------cCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCCCCCC
Confidence 111234677899999764 335678999999999999999999998643322211111 11122233
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+..+.++|.+||+.+|++||++.++++|
T Consensus 223 ~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 223 GQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred cccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 4456789999999999999999999999998
No 299
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.97 E-value=1.6e-30 Score=302.13 Aligned_cols=250 Identities=16% Similarity=0.118 Sum_probs=196.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++.+. ++.++||.+.+... ........+.+|..+++.++||||+++++++..++..|++
T Consensus 3 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v 80 (267)
T cd08229 3 NFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDL--MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIV 80 (267)
T ss_pred hhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhh--hhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEE
Confidence 6888999999999999999974 46799998865421 2233445677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 104 RQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
|||++ ++|.+++.. ...+++..+..++.||+.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd08229 81 LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT 160 (267)
T ss_pred EEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC
Confidence 99999 599988753 4558999999999999999999999999999999999999999999999999876432111
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH--HHHHhcC--C
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL--LAYRRGQ--Y 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~--~~~~~~~--~ 254 (1553)
.......++..|+|||.+. ...++.++|+||+||++|+|++|..||..... ....+.. .
T Consensus 161 -------~~~~~~~~~~~~~ape~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~ 223 (267)
T cd08229 161 -------TAAHSLVGTPYYMSPERIH----------ENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQC 223 (267)
T ss_pred -------cccccccCCcCccCHHHhc----------CCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcC
Confidence 0112334678899999764 33567899999999999999999888854322 1111111 1
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
...+......++.++++|.+||..||++|||+.++++.++
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~ 263 (267)
T cd08229 224 DYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAK 263 (267)
T ss_pred CCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHh
Confidence 1111122345678999999999999999999999888654
No 300
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.97 E-value=1.2e-30 Score=314.76 Aligned_cols=248 Identities=17% Similarity=0.206 Sum_probs=190.8
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEe-
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQET- 96 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~- 96 (1553)
+|++.+.||+|+||.||+|.+. ++.||||++.... .......+.+|..++..+ +||||+++++++..
T Consensus 8 ~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (343)
T cd05103 8 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA----THSEHRALMSELKILIHIGHHLNVVNLLGACTKP 83 (343)
T ss_pred HhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC----ChHHHHHHHHHHHHHHhccCCccHhhhcceeecC
Confidence 7999999999999999999752 2569999986431 123345677788899999 68999999987754
Q ss_pred CCEEEEEecccc-CCHHHHhcCC---------------------------------------------------------
Q 000410 97 DKAAYLLRQYFF-NSLRDRLSTP--------------------------------------------------------- 118 (1553)
Q Consensus 97 ~~~~~lV~E~~~-gsL~d~l~~~--------------------------------------------------------- 118 (1553)
+...|++|||++ |+|.+++...
T Consensus 84 ~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (343)
T cd05103 84 GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEE 163 (343)
T ss_pred CCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchh
Confidence 456899999999 6999988542
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceee
Q 000410 119 ----------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFF 188 (1553)
Q Consensus 119 ----------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~ 188 (1553)
..++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||++........ ....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~-----~~~~ 238 (343)
T cd05103 164 EEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD-----YVRK 238 (343)
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcc-----hhhc
Confidence 1367788889999999999999999999999999999999999999999998875421110 0011
Q ss_pred ecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchH----HHH-HHhcCCCCCCCCCC
Q 000410 189 DTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH----LLA-YRRGQYDPSQHLEK 262 (1553)
Q Consensus 189 ~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~----~~~-~~~~~~~~~~~~~~ 262 (1553)
....++..|+|||.+. ...++.++|||||||++|+|++ |.+||.... ... +..+. ....+.
T Consensus 239 ~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~ 305 (343)
T cd05103 239 GDARLPLKWMAPETIF----------DRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT---RMRAPD 305 (343)
T ss_pred CCCCCCcceECcHHhc----------CCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccC---CCCCCC
Confidence 2233456799999764 3457889999999999999997 788886432 111 11121 112233
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 263 IPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
..++.+.+++.+||+.||++||++.|+++++..
T Consensus 306 ~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~ 338 (343)
T cd05103 306 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGN 338 (343)
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 456789999999999999999999999999753
No 301
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.97 E-value=3.1e-30 Score=301.72 Aligned_cols=244 Identities=18% Similarity=0.160 Sum_probs=196.4
Q ss_pred eEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|+..+.||+|+||.||+|.+. +..||+|++... ........+.+|+.+++.++||||+++++++..+...|+||
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~----~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 81 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLE----EAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 81 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccc----cchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEE
Confidence 677889999999999999875 367999988543 22334567888889999999999999999999999999999
Q ss_pred cccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCC
Q 000410 105 QYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSD 183 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~ 183 (1553)
||++ ++|.+++... .+++.++..++.|++.||.+||++|++|+||||+||+++.++.++|+|||++.......
T Consensus 82 e~~~~~~l~~~i~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~----- 155 (277)
T cd06641 82 EYLGGGSALDLLEPG-PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ----- 155 (277)
T ss_pred EeCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccch-----
Confidence 9999 5899888654 58999999999999999999999999999999999999999999999999886542111
Q ss_pred cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCC-CCCCCCCC
Q 000410 184 FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY-DPSQHLEK 262 (1553)
Q Consensus 184 ~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~-~~~~~~~~ 262 (1553)
.......++..|+|||.+. ....+.++|+||+||++|+|++|.+||............. ...+.+..
T Consensus 156 --~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 223 (277)
T cd06641 156 --IKRNTFVGTPFWMAPEVIK----------QSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNPPTLEG 223 (277)
T ss_pred --hhhccccCCccccChhhhc----------cCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCCCCCCc
Confidence 0112234677899999764 2356788999999999999999999997543322221111 11223444
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 263 IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+..+.++|.+||+.+|.+||++.++++|
T Consensus 224 ~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 224 NYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 556789999999999999999999999998
No 302
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.97 E-value=1.3e-30 Score=305.82 Aligned_cols=247 Identities=25% Similarity=0.351 Sum_probs=193.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|++|.||+|++. +..||+|++...... .....+.+|+.+++.++||||+++++++.+.+..|+|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv 76 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE----GTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLV 76 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc----cchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEE
Confidence 4889999999999999999985 356999998654221 1223455678899999999999999999999999999
Q ss_pred eccccCCHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFFNSLRDRLSTP---PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~---~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||++++|.+++... ..+++..+..++.|++.||+|||++|++||||||+||++++++.++|+|||.+.....+..
T Consensus 77 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~- 155 (284)
T cd07836 77 FEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN- 155 (284)
T ss_pred EecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc-
Confidence 999999999988653 3589999999999999999999999999999999999999999999999998864422211
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcC---
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQ--- 253 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~--- 253 (1553)
......++..|+|||.+.+ ...++.++|||||||++|+|++|.+||....... +....
T Consensus 156 ------~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~ 220 (284)
T cd07836 156 ------TFSNEVVTLWYRAPDVLLG---------SRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTP 220 (284)
T ss_pred ------ccccccccccccChHHhcC---------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Confidence 1122345778999998742 2346789999999999999999999996433211 10000
Q ss_pred -------------CCCC---------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 -------------YDPS---------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 -------------~~~~---------~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+... ..+....+..++++|.+||+.||.+||+++++++|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 281 (284)
T cd07836 221 TESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQH 281 (284)
T ss_pred ChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 0000 00111235678999999999999999999999987
No 303
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.97 E-value=1.3e-30 Score=303.27 Aligned_cols=245 Identities=15% Similarity=0.163 Sum_probs=190.1
Q ss_pred EEeeccCcEEEEEEEECC--------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 31 EVLGGSRFFKSILCKHDE--------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~--------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
+.||+|+||.||+|++.+ ..+++|.+.+.. .......+.+|..+++.++||||+++++++......|+
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 76 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA----TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYI 76 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhccc----chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEE
Confidence 368999999999998753 358999875431 12334567778899999999999999999999999999
Q ss_pred Eecccc-CCHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC-----cEEEeecC
Q 000410 103 LRQYFF-NSLRDRLST-------PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-----WLYLSDFA 169 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~-------~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~-----~vkL~DFG 169 (1553)
||||++ ++|.+++.. ...+++.++..++.||+.||.|||++|++||||||+||+++.++ .++|+|||
T Consensus 77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg 156 (269)
T cd05044 77 IMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156 (269)
T ss_pred EEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcc
Confidence 999998 699999853 23478899999999999999999999999999999999999887 89999999
Q ss_pred ccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH
Q 000410 170 SFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA 248 (1553)
Q Consensus 170 ~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~ 248 (1553)
+++....... ........++..|+|||.+. ...++.++|||||||++|||++ |.+||.......
T Consensus 157 ~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~ 221 (269)
T cd05044 157 LARDIYKSDY-----YRKEGEGLLPVRWMAPESLL----------DGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQE 221 (269)
T ss_pred cccccccccc-----cccCcccCCCccccCHHHHc----------cCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHH
Confidence 9875532211 00112223457799999764 3457889999999999999998 899986443222
Q ss_pred HHhcC-CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 249 YRRGQ-YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 249 ~~~~~-~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
..... .......+...+..+.++|.+||..+|.+||+++++++.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 222 VLQHVTAGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred HHHHHhcCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 22111 11111233344678999999999999999999999998753
No 304
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.97 E-value=7.3e-30 Score=294.22 Aligned_cols=249 Identities=21% Similarity=0.210 Sum_probs=202.6
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--CEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD--KAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~--~~~~ 101 (1553)
+|++.+.||+|++|.||+|.+. +..|++|++...... ....+.+.+|..++++++||||+++++.+... ...+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 77 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS---EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLN 77 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc---hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEE
Confidence 4788899999999999999987 467999998665221 34566788899999999999999999999888 8999
Q ss_pred EEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+++||++ ++|.+++...+.+++.++..++.|++.||.|||++|++||||+|+||+++.++.++|+|||.+.........
T Consensus 78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 157 (260)
T cd06606 78 IFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG 157 (260)
T ss_pred EEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence 9999997 699999988778999999999999999999999999999999999999999999999999988765322110
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH--HHHHHhcC-CCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH--LLAYRRGQ-YDPS 257 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~--~~~~~~~~-~~~~ 257 (1553)
.......++..|+|||.+. ....+.++|||||||++|+|++|..||.... ........ ....
T Consensus 158 -----~~~~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 222 (260)
T cd06606 158 -----EGTGSVRGTPYWMAPEVIR----------GEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEP 222 (260)
T ss_pred -----ccccCCCCCccccCHhhhc----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCC
Confidence 0122344678899999764 2347889999999999999999998986543 11111111 1122
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..++...+..++++|.+||+.||++||++.++++|
T Consensus 223 ~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~ 257 (260)
T cd06606 223 PEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQH 257 (260)
T ss_pred cCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhC
Confidence 23444557899999999999999999999999998
No 305
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.97 E-value=5.5e-31 Score=304.72 Aligned_cols=237 Identities=21% Similarity=0.228 Sum_probs=185.7
Q ss_pred EEeeccCcEEEEEEEECC---------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEE
Q 000410 31 EVLGGSRFFKSILCKHDE---------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~---------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
+.||+|+||.||+|.+.. ..+++|.+.+. .....+.+.+|..+++.++||||+++++++..+...+
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~-----~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~ 75 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKS-----HRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESI 75 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcch-----hHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcE
Confidence 468999999999998743 23777776432 2344556778888999999999999999999989999
Q ss_pred EEecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCc--------EEEeecCcc
Q 000410 102 LLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNW--------LYLSDFASF 171 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~--------vkL~DFG~a 171 (1553)
+||||++ |+|.+++..+ ..+++..+..++.||+.||+|||++||+||||||+|||++.++. ++++|||.+
T Consensus 76 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~ 155 (258)
T cd05078 76 MVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS 155 (258)
T ss_pred EEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccc
Confidence 9999999 6999999764 35899999999999999999999999999999999999987764 699999987
Q ss_pred ccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC-CCCCCchHHHHHH
Q 000410 172 KPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYR 250 (1553)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~pf~~~~~~~~~ 250 (1553)
..... .....+++.|+|||.+.. ...++.++|||||||++|||++| .+||.........
T Consensus 156 ~~~~~-----------~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~ 215 (258)
T cd05078 156 ITVLP-----------KEILLERIPWVPPECIEN---------PQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL 215 (258)
T ss_pred cccCC-----------chhccccCCccCchhccC---------CCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH
Confidence 64321 112345678999997642 23468899999999999999999 6777644332211
Q ss_pred hcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 251 RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 251 ~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.. ......++...+..+.++|.+||+.||++|||++++++.+
T Consensus 216 ~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l 257 (258)
T cd05078 216 QF-YEDRHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDL 257 (258)
T ss_pred HH-HHccccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 11 1111223334457899999999999999999999999875
No 306
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.97 E-value=1.5e-30 Score=313.46 Aligned_cols=248 Identities=22% Similarity=0.291 Sum_probs=194.6
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC-----C
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD-----K 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~-----~ 98 (1553)
+|.+.+.||.|+||.||+|++. +..||||.+..... .......+.+|+.+++.++||||+++++++... .
T Consensus 6 ~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 6 KYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD---NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred ceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc---ccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 6899999999999999999985 36799999865321 112234456788899999999999999887544 3
Q ss_pred EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 99 AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 99 ~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
..|+|+||+.++|.+++...+.+++.++..++.|++.||.|||++|++||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~ 162 (337)
T cd07858 83 DVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG 162 (337)
T ss_pred cEEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCc
Confidence 58999999999999999888889999999999999999999999999999999999999999999999999987653221
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----------
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA---------- 248 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~---------- 248 (1553)
.......++..|+|||.+.. ...++.++|||||||++|+|++|.+||...+...
T Consensus 163 -------~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~ 226 (337)
T cd07858 163 -------DFMTEYVVTRWYRAPELLLN---------CSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLG 226 (337)
T ss_pred -------ccccccccccCccChHHHhc---------CCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhC
Confidence 11123346788999998742 1247889999999999999999999996532110
Q ss_pred -----------------HHhcC-CCCC---CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 -----------------YRRGQ-YDPS---QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 -----------------~~~~~-~~~~---~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.+.. .... .......++.++++|.+||+.||++|||++++++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 227 SPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred CCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 00000 0000 01112345679999999999999999999999998
No 307
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.97 E-value=3e-30 Score=300.46 Aligned_cols=250 Identities=19% Similarity=0.195 Sum_probs=186.2
Q ss_pred EEeeccCcEEEEEEEECC----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecc
Q 000410 31 EVLGGSRFFKSILCKHDE----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQY 106 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~ 106 (1553)
+.||+|+||.||+|...+ ..+++|.+.... . ......+.+|..+++.++||||+++++++.+....|+||||
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~---~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 76 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSA---S-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEF 76 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCC---C-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEEC
Confidence 368999999999998643 358888775432 1 22334677788999999999999999999988899999999
Q ss_pred cc-CCHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 107 FF-NSLRDRLSTP-----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 107 ~~-gsL~d~l~~~-----~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
++ |+|.+++... ..+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||.++.....
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~--- 153 (269)
T cd05087 77 CPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE--- 153 (269)
T ss_pred CCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCc---
Confidence 99 6999998642 23567778889999999999999999999999999999999999999999988643111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHH---HH--hcCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLA---YR--RGQY 254 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~---~~--~~~~ 254 (1553)
..........++..|+|||.+...... .....++.++||||+||++|||++ |.+||....... +. ....
T Consensus 154 --~~~~~~~~~~~~~~y~aPE~~~~~~~~---~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~ 228 (269)
T cd05087 154 --DYYVTPDQLWVPLRWIAPELVDEVHGN---LLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQL 228 (269)
T ss_pred --ceeecCCCcCCcccccCHhHhcccccc---ccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccC
Confidence 111111233457789999987532111 112246889999999999999996 998986432221 11 1111
Q ss_pred C-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 255 D-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 255 ~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
. +.+.+....++.+.+++.+|+ .+|++|||++|+++.+
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l 267 (269)
T cd05087 229 KLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLL 267 (269)
T ss_pred CCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHh
Confidence 1 222233345678999999998 6899999999999764
No 308
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.97 E-value=4.7e-30 Score=301.30 Aligned_cols=249 Identities=20% Similarity=0.188 Sum_probs=189.7
Q ss_pred ceEEEEEeeccCcEEEEEEEEC------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe--C
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET--D 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~--~ 97 (1553)
+|++.+.||+|+||.||+|... +..|++|.+... .....+.+.+|+++++.++||||+++++++.. .
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~ 79 (284)
T cd05081 5 HLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS-----TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR 79 (284)
T ss_pred cceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC-----CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC
Confidence 7899999999999999999753 356999998543 12334567888899999999999999987643 3
Q ss_pred CEEEEEecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccccc
Q 000410 98 KAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTY 175 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~ 175 (1553)
...|+||||++ ++|.+++.. +..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++....
T Consensus 80 ~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 80 RNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred CceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 56899999998 699999965 3568999999999999999999999999999999999999999999999999987542
Q ss_pred CCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH-------
Q 000410 176 IPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA------- 248 (1553)
Q Consensus 176 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~------- 248 (1553)
.... .........++..|+|||.+. +..++.++|||||||++|||++|..++.......
T Consensus 160 ~~~~----~~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~ 225 (284)
T cd05081 160 QDKE----YYKVREPGESPIFWYAPESLT----------ESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGND 225 (284)
T ss_pred CCCc----ceeecCCCCCceEeeCHHHhc----------cCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccc
Confidence 2111 101111122345699999764 3457889999999999999999855543211110
Q ss_pred ------------HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 249 ------------YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 249 ------------~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
...... ....+...+..+.+||.+||..+|++|||+.|+++.+..
T Consensus 226 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05081 226 KQGQMIVYHLIELLKNNG--RLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEA 282 (284)
T ss_pred cccccchHHHHHHHhcCC--cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHh
Confidence 011110 111223345789999999999999999999999988653
No 309
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=1.2e-30 Score=306.05 Aligned_cols=247 Identities=20% Similarity=0.295 Sum_probs=193.9
Q ss_pred eEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|++.+.||.|++|.||+|.+. +..|++|++...... ......+.+|+++++.++|||++++++++.++...|++|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~ 77 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETED---EGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVF 77 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeeccccc---ccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEE
Confidence 567899999999999999875 467999998654211 223345667888999999999999999999999999999
Q ss_pred ccccCCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 105 QYFFNSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 105 E~~~gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||++++|.+++...+ .+++..+..++.|++.||+|||++|++||||+|+||+++.++.++|+|||.+.....+...
T Consensus 78 e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~-- 155 (283)
T cd07835 78 EFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRT-- 155 (283)
T ss_pred eccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccc--
Confidence 999999999997765 6899999999999999999999999999999999999999999999999998654222111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH----HHHhcC-----
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----AYRRGQ----- 253 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~----~~~~~~----- 253 (1553)
.....+++.|+|||.+.+ ...++.++|||||||++|+|++|.+||...... .+.+..
T Consensus 156 -----~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 221 (283)
T cd07835 156 -----YTHEVVTLWYRAPEILLG---------SRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDE 221 (283)
T ss_pred -----cCccccccCCCCCceeec---------CcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCh
Confidence 112235778999997642 234678999999999999999999998643221 111100
Q ss_pred ---------------C-----CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 ---------------Y-----DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ---------------~-----~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+ ..........+..+.++|.+||+.||++||+++|+++|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 280 (283)
T cd07835 222 DVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQH 280 (283)
T ss_pred HHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0 00001112334689999999999999999999999987
No 310
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.97 E-value=1.8e-30 Score=303.29 Aligned_cols=233 Identities=17% Similarity=0.161 Sum_probs=182.1
Q ss_pred EeeccCcEEEEEEEECC--------------------------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCC
Q 000410 32 VLGGSRFFKSILCKHDE--------------------------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHP 85 (1553)
Q Consensus 32 ~LG~G~fg~V~~a~~~~--------------------------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hp 85 (1553)
.||+|+||.||+|.... ..|++|++... .......+.+|..+++.++||
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-----~~~~~~~~~~~~~~~~~l~h~ 76 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS-----HRDIALAFFETASLMSQVSHI 76 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH-----HHHHHHHHHHHHHHHhcCCCC
Confidence 69999999999997411 23788887432 233445677788899999999
Q ss_pred CeeEEEEEEEeCCEEEEEecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC--
Q 000410 86 HVWAFQFWQETDKAAYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-- 161 (1553)
Q Consensus 86 nIv~~~~~~~~~~~~~lV~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~-- 161 (1553)
||+++++++..+...|+||||++ |+|.+++.. ++.+++..+..++.||+.||+|||++||+||||||+|||++..+
T Consensus 77 niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~ 156 (274)
T cd05076 77 HLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLA 156 (274)
T ss_pred CeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcc
Confidence 99999999999999999999999 589888864 56789999999999999999999999999999999999998654
Q ss_pred -----cEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHH-
Q 000410 162 -----WLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF- 235 (1553)
Q Consensus 162 -----~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl- 235 (1553)
.++|+|||.+...... ....++..|+|||.+.+ ...++.++|||||||++|||+
T Consensus 157 ~~~~~~~kl~d~g~~~~~~~~-----------~~~~~~~~~~aPe~~~~---------~~~~~~~~Dv~slG~~l~el~~ 216 (274)
T cd05076 157 EGTSPFIKLSDPGVSFTALSR-----------EERVERIPWIAPECVPG---------GNSLSTAADKWSFGTTLLEICF 216 (274)
T ss_pred cCccceeeecCCccccccccc-----------cccccCCcccCchhhcC---------CCCCCcHHHHHHHHHHHHHHHh
Confidence 4899999987543111 11235677999997642 245788999999999999995
Q ss_pred cCCCCCCchHHH---HHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 236 LEVPFFELSHLL---AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 236 tg~~pf~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+|.+||...... .+..... ..+....+.+.++|.+||+.+|++||++.++++++
T Consensus 217 ~g~~p~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 217 DGEVPLKERTPSEKERFYEKKH----RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred CCCCCccccChHHHHHHHHhcc----CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 678888643322 1211111 12222346799999999999999999999999875
No 311
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=1.9e-30 Score=306.40 Aligned_cols=248 Identities=21% Similarity=0.265 Sum_probs=189.9
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCCE---
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKA--- 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~~--- 99 (1553)
+|++.+.||+|+||.||+|.+. +..||+|++...... ......+.+|+.+++.+. ||||+++++++.....
T Consensus 2 ~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~---~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~ 78 (295)
T cd07837 2 AYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE---EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGK 78 (295)
T ss_pred CceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc---cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCC
Confidence 6889999999999999999985 357999987654211 112345667778899885 6999999998876655
Q ss_pred --EEEEeccccCCHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec-CCcEEEeecCcc
Q 000410 100 --AYLLRQYFFNSLRDRLSTP-----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS-WNWLYLSDFASF 171 (1553)
Q Consensus 100 --~~lV~E~~~gsL~d~l~~~-----~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~-~~~vkL~DFG~a 171 (1553)
.|+||||++++|.+++... ..+++..++.++.||+.||.|||++||+||||||+||+++. ++.++|+|||.+
T Consensus 79 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~ 158 (295)
T cd07837 79 PSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLG 158 (295)
T ss_pred ceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccc
Confidence 8999999999999988532 34799999999999999999999999999999999999998 889999999988
Q ss_pred ccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HH--
Q 000410 172 KPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LA-- 248 (1553)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~-- 248 (1553)
.....+... .....+++.|+|||.+.+ ...++.++||||+||++|+|++|.+||..... ..
T Consensus 159 ~~~~~~~~~-------~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~ 222 (295)
T cd07837 159 RAFSIPVKS-------YTHEIVTLWYRAPEVLLG---------STHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLL 222 (295)
T ss_pred eecCCCccc-------cCCcccccCCCChHHhhC---------CCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence 755322111 011235678999997642 23568899999999999999999989864321 11
Q ss_pred -HHhcCCCC-C-----------------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 -YRRGQYDP-S-----------------------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 -~~~~~~~~-~-----------------------~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+......+ . .......++.+.++|.+||..||.+||+++|++.|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~ 291 (295)
T cd07837 223 HIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTH 291 (295)
T ss_pred HHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 11100000 0 00011245689999999999999999999999998
No 312
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.97 E-value=6.1e-30 Score=301.50 Aligned_cols=248 Identities=18% Similarity=0.150 Sum_probs=190.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETD----- 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~----- 97 (1553)
+|.+.+.||+|+||.||++...+ ..+|+|++.... .....+.+|..+++.+ +||||+++++++...
T Consensus 23 ~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~------~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 96 (291)
T cd06639 23 TWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS------DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVG 96 (291)
T ss_pred CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc------cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCC
Confidence 79999999999999999999853 569999985431 1234456677788888 799999999988643
Q ss_pred CEEEEEecccc-CCHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccc
Q 000410 98 KAAYLLRQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~ 172 (1553)
...|+||||++ ++|.+++. ....+++..++.++.|++.||+|||++|++||||||+||+++.++.++|+|||.+.
T Consensus 97 ~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~ 176 (291)
T cd06639 97 GQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSA 176 (291)
T ss_pred CeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccch
Confidence 36899999998 59998875 23468999999999999999999999999999999999999999999999999887
Q ss_pred cccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HH---
Q 000410 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LA--- 248 (1553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~--- 248 (1553)
....... ......++..|+|||.+.... .....++.++||||+||++|||++|++||..... ..
T Consensus 177 ~~~~~~~-------~~~~~~~~~~y~aPE~~~~~~-----~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~ 244 (291)
T cd06639 177 QLTSTRL-------RRNTSVGTPFWMAPEVIACEQ-----QYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFK 244 (291)
T ss_pred hcccccc-------cccCccCCccccChhhhcCCC-----CcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHH
Confidence 5421111 112234678899999875321 1123468899999999999999999988864322 22
Q ss_pred HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.+..... ...+......+.++|.+||+.||++||++.|+++|
T Consensus 245 ~~~~~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 245 IPRNPPPT-LLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HhcCCCCC-CCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 22221111 11122234679999999999999999999999998
No 313
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=7.2e-30 Score=293.89 Aligned_cols=247 Identities=22% Similarity=0.256 Sum_probs=201.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|++|.||++.+.. ..|++|.+.+.... +.....+.+|+++++.+.|||++++++++.+....|++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 77 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK---EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYII 77 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC---HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEE
Confidence 47889999999999999998853 57999999765221 34556788899999999999999999999999999999
Q ss_pred eccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+++ +|.+++.....+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||.+.........
T Consensus 78 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-- 155 (254)
T cd06627 78 LEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD-- 155 (254)
T ss_pred EecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc--
Confidence 999994 99999988778999999999999999999999999999999999999999999999999988755322111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch-HHHHHHhcCCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS-HLLAYRRGQYDPSQHLE 261 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~-~~~~~~~~~~~~~~~~~ 261 (1553)
.....++..|+|||.+. ...++.++||||+|+++|+|++|.+||... ....+..........++
T Consensus 156 -----~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 220 (254)
T cd06627 156 -----DASVVGTPYWMAPEVIE----------MSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDDHPPLP 220 (254)
T ss_pred -----ccccccchhhcCHhhhc----------CCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccCCCCCC
Confidence 12234577899999653 234678999999999999999998888533 22222222222223344
Q ss_pred CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 262 KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 262 ~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...++.++++|.+||..+|++||++.+++.+
T Consensus 221 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~ 251 (254)
T cd06627 221 EGISPELKDFLMQCFQKDPNLRPTAKQLLKH 251 (254)
T ss_pred CCCCHHHHHHHHHHHhCChhhCcCHHHHhcC
Confidence 5556789999999999999999999999987
No 314
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.9e-31 Score=314.09 Aligned_cols=250 Identities=18% Similarity=0.191 Sum_probs=201.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--c---e-EEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--G---L-VLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~---~-vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~ 99 (1553)
+..+.++||+|+||.||+|+... + . ||+|..... ....++...++.+|++++++++||||+++||+...+..
T Consensus 158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~--~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGS--SELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP 235 (474)
T ss_pred CccccceeecccccEEEEEEEEecCCceeeeeEEEeeccc--ccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence 56677999999999999998743 2 3 788877532 22346667788999999999999999999999999999
Q ss_pred EEEEecccc-CCHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPF-LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~-l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
+|||||+|. |+|.++|.+.+. ++..++.+++.|.+.||+|||+++++||||-.+|+|++.++.+||+|||+++...
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~-- 313 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGS-- 313 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCc--
Confidence 999999999 599999998874 9999999999999999999999999999999999999999999999999987442
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcC-CC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQ-YD 255 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~-~~ 255 (1553)
.+........-...|+|||.+. ...|++++||||+||++||+++ |..||.+-+....+... ..
T Consensus 314 -----~~~~~~~~~klPirWLAPEtl~----------~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~ 378 (474)
T KOG0194|consen 314 -----QYVMKKFLKKLPIRWLAPETLN----------TGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKN 378 (474)
T ss_pred -----ceeeccccccCcceecChhhhc----------cCccccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhc
Confidence 0000000112345699999663 4489999999999999999999 67788776655544333 11
Q ss_pred -CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 256 -PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 256 -~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.....+...+..+..++.+|+..||++||++.++.+.+.
T Consensus 379 ~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~ 418 (474)
T KOG0194|consen 379 GYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLE 418 (474)
T ss_pred CccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHH
Confidence 112244456678999999999999999999999998754
No 315
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.97 E-value=3.2e-30 Score=298.60 Aligned_cols=246 Identities=14% Similarity=0.092 Sum_probs=191.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|.+.+.||+|+||.||+|.+.+ ..+++|.+.... ...+.+.+|+.+++.++|||++++++++.. ...|++|
T Consensus 7 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~------~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05069 7 SLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT------MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-EPIYIVT 79 (260)
T ss_pred HeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC------ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-CCcEEEE
Confidence 68999999999999999998866 469999875431 123456778899999999999999988754 5688999
Q ss_pred cccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||+. ++|.+++... ..+++..+..++.|++.||.|||++|++||||||+||++++++.++|+|||.+.........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~- 158 (260)
T cd05069 80 EFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT- 158 (260)
T ss_pred EcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCccc-
Confidence 9999 5999999653 34789999999999999999999999999999999999999999999999998654221110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHH-HhcCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAY-RRGQYDPSQH 259 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~-~~~~~~~~~~ 259 (1553)
......++..|+|||... ...++.++|||||||++|||++ |.+||........ ..........
T Consensus 159 -----~~~~~~~~~~y~~Pe~~~----------~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~ 223 (260)
T cd05069 159 -----ARQGAKFPIKWTAPEAAL----------YGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYRMP 223 (260)
T ss_pred -----ccCCCccchhhCCHHHhc----------cCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC
Confidence 011223456799999653 3467889999999999999999 7999965432221 1111111112
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.+...+..+++++.+||..||++||+++++++-++
T Consensus 224 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 258 (260)
T cd05069 224 CPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLE 258 (260)
T ss_pred CCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHh
Confidence 23345678999999999999999999999998654
No 316
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.97 E-value=2.9e-30 Score=299.09 Aligned_cols=248 Identities=13% Similarity=0.112 Sum_probs=187.0
Q ss_pred EEeeccCcEEEEEEEECC-----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE-eCCEEEEEe
Q 000410 31 EVLGGSRFFKSILCKHDE-----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQE-TDKAAYLLR 104 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~-----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~-~~~~~~lV~ 104 (1553)
+.||+|+||.||+|.+.+ ..+|+|.+.... .....+.+.+|..+++.++||||+++++++. .++..|++|
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~ 76 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT----DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVL 76 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccC----CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEE
Confidence 368999999999998632 358999874321 1233456677888999999999999999764 456689999
Q ss_pred cccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||+. |+|.+++... ..+++..+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++.........
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~- 155 (262)
T cd05058 77 PYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS- 155 (262)
T ss_pred ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCccee-
Confidence 9999 6999999764 346788889999999999999999999999999999999999999999999987543211000
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC-CCCCCchHHHHHHhcCCC-CCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYD-PSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~pf~~~~~~~~~~~~~~-~~~~~ 260 (1553)
........++..|+|||.+. ...++.++|||||||++|||++| .+||.............. .....
T Consensus 156 --~~~~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (262)
T cd05058 156 --VHNHTGAKLPVKWMALESLQ----------TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRLLQ 223 (262)
T ss_pred --ecccccCcCCccccChhHhc----------cCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCC
Confidence 00011223456799999764 34578899999999999999995 888865443332221111 11112
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
+...++.+.+++.+||..+|++||++.++++.+..
T Consensus 224 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~ 258 (262)
T cd05058 224 PEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQ 258 (262)
T ss_pred CCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHH
Confidence 33345789999999999999999999999998653
No 317
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.97 E-value=1.8e-30 Score=306.10 Aligned_cols=244 Identities=20% Similarity=0.207 Sum_probs=193.0
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|.....||.|+||.||++.+. +..||||.+... .....+.+.+|..+++.++||||+++++.+...+..|+|
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv 97 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLR-----KQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVV 97 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecc-----hHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEE
Confidence 3455678999999999999875 467999988543 123445577888899999999999999999999999999
Q ss_pred eccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+++ +|.+++.. +.+++.++..++.||+.||.|||++||+||||||+||+++.++.++|+|||++........
T Consensus 98 ~e~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~--- 173 (292)
T cd06658 98 MEFLEGGALTDIVTH-TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP--- 173 (292)
T ss_pred EeCCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc---
Confidence 999984 88888754 4589999999999999999999999999999999999999999999999998864321111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH-H--hcCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY-R--RGQYDPSQH 259 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~-~--~~~~~~~~~ 259 (1553)
......++..|+|||.+. ...++.++||||+||++|||++|..||........ . .........
T Consensus 174 ----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 239 (292)
T cd06658 174 ----KRKSLVGTPYWMAPEVIS----------RLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVK 239 (292)
T ss_pred ----cCceeecCccccCHHHHc----------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccc
Confidence 011234678899999764 33567899999999999999999888865433221 1 112222211
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.....+..+.+++.+||..||.+|||++++++|
T Consensus 240 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 240 DSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred cccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 222346789999999999999999999999998
No 318
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.97 E-value=3.4e-30 Score=301.29 Aligned_cols=246 Identities=19% Similarity=0.165 Sum_probs=194.9
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC---CCCeeEEEEEEEeCCEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID---HPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~---hpnIv~~~~~~~~~~~~ 100 (1553)
.|++.+.||+|+||.||+|.+. +..|++|++...... .....+.+|..+++.+. ||||+++++++..+...
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~ 77 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPD----DDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRL 77 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCc----hhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEE
Confidence 4677899999999999999985 367999998654221 22345666777777775 99999999999999999
Q ss_pred EEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCC
Q 000410 101 YLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 101 ~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~ 179 (1553)
|+||||++ ++|.+++... .+++..+..++.|++.||.|||+.||+||||+|+||+++.++.++|+|||.+........
T Consensus 78 ~lv~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 156 (277)
T cd06917 78 WIIMEYAEGGSVRTLMKAG-PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS 156 (277)
T ss_pred EEEEecCCCCcHHHHHHcc-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc
Confidence 99999998 5999998765 689999999999999999999999999999999999999999999999998875532211
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCC-CCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYD-PSQ 258 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~-~~~ 258 (1553)
. .....|+..|+|||.+.. +..++.++|+|||||++|+|++|.+||.............. ..+
T Consensus 157 ~-------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~ 220 (277)
T cd06917 157 K-------RSTFVGTPYWMAPEVITE---------GKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSKPP 220 (277)
T ss_pred c-------cccccCCcceeCHHHhcc---------CCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCCCC
Confidence 0 112346778999997642 23568899999999999999999999976554333221111 111
Q ss_pred CCCC-CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEK-IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~-~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+.. ..+..+.+++.+||+.||++||++.+++++
T Consensus 221 ~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 221 RLEDNGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 2222 245789999999999999999999999987
No 319
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.3e-31 Score=297.06 Aligned_cols=243 Identities=19% Similarity=0.190 Sum_probs=203.2
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~ 101 (1553)
-+|.++.+||.|+||+|.+|..++ +.+|||++.|.-...+ +..+-. ..|.++|... +-|.+++++.+|++-+.+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQd-DDvect-m~EKrvLAL~~kppFL~qlHScFQTmDRLy 426 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQD-DDVECT-MVEKRVLALPGKPPFLVQLHSCFQTMDRLY 426 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeec-Ccccce-ehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence 378899999999999999998876 5699999987621111 111111 1233455544 4678899999999999999
Q ss_pred EEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+||||+. |+|--.|++-+.+.+..+..++..|+-||-+||++||+.||||.+|||++.+|++||+|||+++....+.
T Consensus 427 FVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~-- 504 (683)
T KOG0696|consen 427 FVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDG-- 504 (683)
T ss_pred eEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCC--
Confidence 9999999 5999999998999999999999999999999999999999999999999999999999999998643222
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHL 260 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~ 260 (1553)
....+.+|||.|+|||++. ..+|+.++|.||+|++||||+.|+|||++++...+.+.+.+.....
T Consensus 505 -----~TTkTFCGTPdYiAPEIi~----------YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsy 569 (683)
T KOG0696|consen 505 -----VTTKTFCGTPDYIAPEIIA----------YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSY 569 (683)
T ss_pred -----cceeeecCCCcccccceEE----------ecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcC
Confidence 1235778999999999764 4589999999999999999999999999988777766666656667
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCH
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSA 286 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa 286 (1553)
++..+.+..+++...|.+.|.+|..+
T Consensus 570 PKslSkEAv~ickg~ltK~P~kRLGc 595 (683)
T KOG0696|consen 570 PKSLSKEAVAICKGLLTKHPGKRLGC 595 (683)
T ss_pred cccccHHHHHHHHHHhhcCCccccCC
Confidence 88888999999999999999999865
No 320
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.97 E-value=5.7e-30 Score=296.54 Aligned_cols=244 Identities=14% Similarity=0.122 Sum_probs=192.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+|.+.+.||+|+||.||++...+ ..+++|.+... ......+.+|.++++.++|+||+++++++.. ...|++|
T Consensus 7 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~ 79 (260)
T cd05073 7 SLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG------SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIIT 79 (260)
T ss_pred ceeEEeEecCccceEEEEEEecCCccEEEEecCCC------hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEE
Confidence 79999999999999999998755 55999987542 1234567778899999999999999999877 7789999
Q ss_pred cccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 105 QYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
||++ ++|.+++.+. ..+++.++..++.||+.||.|||++|++||||||+||+++..+.++|+|||.+........
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 157 (260)
T cd05073 80 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY-- 157 (260)
T ss_pred EeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc--
Confidence 9998 6999999753 3578889999999999999999999999999999999999999999999998865421110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHH---hcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYR---RGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~---~~~~~~~ 257 (1553)
.......++..|+|||.+. ...++.++|+|||||++|++++ |.+||......... ...+..
T Consensus 158 ----~~~~~~~~~~~y~~PE~~~----------~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~- 222 (260)
T cd05073 158 ----TAREGAKFPIKWTAPEAIN----------FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRM- 222 (260)
T ss_pred ----ccccCCcccccccCHhHhc----------cCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCCC-
Confidence 0011122345699999764 3457889999999999999998 89999754332222 122211
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
......+..+.+++.+||+.||++||++.++++.+.
T Consensus 223 -~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~ 258 (260)
T cd05073 223 -PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLD 258 (260)
T ss_pred -CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHh
Confidence 122344578999999999999999999999987653
No 321
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.97 E-value=5.9e-30 Score=302.06 Aligned_cols=257 Identities=14% Similarity=0.122 Sum_probs=185.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECCc-----eEEEEEEeccCCCcCHHHH------HHHHHHHHHHHhcCCCCCeeEEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEG-----LVLVKVYFKRGDYIDLREY------ERRLFHIRETFRSIDHPHVWAFQFWQ 94 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~-----~vavKv~~~~~~~~~~~~~------~~~l~~e~~~l~~l~hpnIv~~~~~~ 94 (1553)
+|++.+.||+|+||+||+|.+.+. .+++|+..........+.. ......+...+..+.|+||+++++..
T Consensus 13 ~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~ 92 (294)
T PHA02882 13 EWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCG 92 (294)
T ss_pred ceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEee
Confidence 799999999999999999997643 4677765433222111111 11112223445677899999999876
Q ss_pred EeCC----EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCc
Q 000410 95 ETDK----AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFAS 170 (1553)
Q Consensus 95 ~~~~----~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~ 170 (1553)
.... ..|+++|++..++.+.+......++..++.|+.|++.||+|||++||+||||||+|||++.++.++|+|||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGl 172 (294)
T PHA02882 93 SFKRCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGI 172 (294)
T ss_pred eEecCCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCC
Confidence 5443 457899998888888877655568888999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----H
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----L 246 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~ 246 (1553)
++....................||+.|+|||.+. +..++.++|||||||++|||++|.+||.... .
T Consensus 173 a~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~----------~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~ 242 (294)
T PHA02882 173 ASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHN----------GACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNL 242 (294)
T ss_pred ceeeccCCcccccccccccccCCCccccCHHHhC----------CCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHH
Confidence 8765322111100011112345899999999654 4467899999999999999999999996431 1
Q ss_pred HH-----HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 247 LA-----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 247 ~~-----~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.. +...........+ ..++.+.+++..|+..+|++||+++++++-+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 243 IHAAKCDFIKRLHEGKIKIK-NANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHhHHHHHHHhhhhhhccC-CCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 11 1111111111122 2357899999999999999999999998753
No 322
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.97 E-value=1.8e-30 Score=305.19 Aligned_cols=249 Identities=21% Similarity=0.308 Sum_probs=195.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||+|.+.+ ..|++|++..... .......+.+|.++++.++||||+++++++..++..|++
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv 78 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED---DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLV 78 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc---cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEE
Confidence 68999999999999999999864 5699999865421 233456678888999999999999999999999999999
Q ss_pred eccccCCHH-HHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLR-DRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~-d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+++++. .++.....+++.++..++.||+.||.|||++|++||||||+||+++.++.++|+|||.+........
T Consensus 79 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~--- 155 (288)
T cd07833 79 FEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA--- 155 (288)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc---
Confidence 999997554 4455556699999999999999999999999999999999999999999999999999876532221
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHh-------
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRR------- 251 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~------- 251 (1553)
.......++..|+|||.+.. ...++.++||||+||++|+|++|.+||....... ...
T Consensus 156 ---~~~~~~~~~~~~~~PE~~~~---------~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (288)
T cd07833 156 ---SPLTDYVATRWYRAPELLVG---------DTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPP 223 (288)
T ss_pred ---ccccCcccccCCcCCchhcC---------CCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 01122345778999998742 1257889999999999999999999986432211 100
Q ss_pred ---------cCCCC----C--------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 ---------GQYDP----S--------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ---------~~~~~----~--------~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+.. . ...+...+..++++|.+||..||++||+++++++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 285 (288)
T cd07833 224 SHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQH 285 (288)
T ss_pred HHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcC
Confidence 00000 0 01122336789999999999999999999999987
No 323
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.97 E-value=7.4e-30 Score=292.89 Aligned_cols=243 Identities=21% Similarity=0.249 Sum_probs=197.0
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+.+.||+|++|.||++.+. +..+++|++..... .....+.+|.++++.++||||+++++++..+...+++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~ 75 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-----EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIV 75 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence 4788999999999999999986 46699999865421 3456778888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
+||++ ++|.+++... ..+++.++..++.|++.||.+||++|++||||+|+||+++.++.++|+|||.+........
T Consensus 76 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 153 (253)
T cd05122 76 MEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA-- 153 (253)
T ss_pred EecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccc--
Confidence 99999 6999999776 5699999999999999999999999999999999999999999999999998875532211
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HHH-HhcCCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LAY-RRGQYDPSQH 259 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~~-~~~~~~~~~~ 259 (1553)
.....++..|+|||.+. ...++.++|+||+||++|+|++|.+||..... ... .... .....
T Consensus 154 ------~~~~~~~~~~~~PE~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~ 216 (253)
T cd05122 154 ------RNTMVGTPYWMAPEVIN----------GKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIAT-NGPPG 216 (253)
T ss_pred ------ccceecCCcccCHHHHc----------CCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHh-cCCCC
Confidence 12334677899999764 23478899999999999999999988865421 111 1111 11111
Q ss_pred CCC--CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEK--IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~--~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... ..+..+.++|.+||+.||++|||+.++++|
T Consensus 217 ~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~ 251 (253)
T cd05122 217 LRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKH 251 (253)
T ss_pred cCcccccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 221 226789999999999999999999999987
No 324
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.97 E-value=3.3e-30 Score=304.20 Aligned_cols=248 Identities=20% Similarity=0.277 Sum_probs=192.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||+|.+.. ..||+|.+...... ......+.+|.++++.++||||+++++++.++...|+|
T Consensus 3 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 79 (294)
T PLN00009 3 QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED---EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLV 79 (294)
T ss_pred ceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc---ccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEE
Confidence 68999999999999999999863 56999988654211 22334566788999999999999999999999999999
Q ss_pred eccccCCHHHHhcCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec-CCcEEEeecCccccccCCCCC
Q 000410 104 RQYFFNSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS-WNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~-~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||++++|.+.+...+. +++..+..++.||+.||+|||++|++||||||+||+++. ++.+||+|||++........
T Consensus 80 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~- 158 (294)
T PLN00009 80 FEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVR- 158 (294)
T ss_pred EecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCcc-
Confidence 99999999998865443 578888899999999999999999999999999999985 45799999998865422111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HHHHh---cCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LAYRR---GQYDP 256 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~~~~---~~~~~ 256 (1553)
......+++.|+|||.+.+ ...++.++||||+||++|+|++|.+||..... ..+.+ ....+
T Consensus 159 ------~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~ 223 (294)
T PLN00009 159 ------TFTHEVVTLWYRAPEILLG---------SRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTP 223 (294)
T ss_pred ------ccccCceeecccCHHHHhC---------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 1122345788999997642 23578899999999999999999999964321 11110 00000
Q ss_pred -C----------------C--------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 -S----------------Q--------HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 -~----------------~--------~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
. + ......++.+.++|.+||+.||++||+++++++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 224 NEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred ChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 0 0111235678999999999999999999999997
No 325
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.97 E-value=8.4e-30 Score=296.50 Aligned_cols=244 Identities=22% Similarity=0.251 Sum_probs=192.1
Q ss_pred EEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecc
Q 000410 29 LKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQY 106 (1553)
Q Consensus 29 ~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~ 106 (1553)
....||+|+||.||+|++.+ ..|++|.+.... ....+.+.+|+.+++.++||||+++++++..+...|+|+||
T Consensus 12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 86 (268)
T cd06624 12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD-----SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQ 86 (268)
T ss_pred ceEEEecCCceEEEEeEecCCCcEEEEEEecCCC-----HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEec
Confidence 44689999999999998754 469999875431 23345678888999999999999999999999999999999
Q ss_pred cc-CCHHHHhcCC-CCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec-CCcEEEeecCccccccCCCCCC
Q 000410 107 FF-NSLRDRLSTP-PFL--SLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS-WNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 107 ~~-gsL~d~l~~~-~~l--~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~-~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
++ ++|.+++... ..+ ++..+..++.||+.||.|||++||+||||||+||+++. ++.++|+|||.+...... +.
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~--~~ 164 (268)
T cd06624 87 VPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGI--NP 164 (268)
T ss_pred CCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccC--CC
Confidence 98 5999998754 345 78889999999999999999999999999999999986 679999999988644211 11
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH---HHHHHhcCCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH---LLAYRRGQYDPSQ 258 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~---~~~~~~~~~~~~~ 258 (1553)
. .....+++.|+|||.+... ...++.++|+||+|+++|+|++|.+||.... ............+
T Consensus 165 ~-----~~~~~~~~~~~aPE~~~~~--------~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 231 (268)
T cd06624 165 C-----TETFTGTLQYMAPEVIDKG--------PRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHP 231 (268)
T ss_pred c-----cccCCCCccccChhhhccc--------cccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCC
Confidence 0 1122367889999977421 2346789999999999999999999986422 1122222222233
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.++...++.+++++.+||+.+|.+||++.|+++|
T Consensus 232 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 232 EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 3455566789999999999999999999999998
No 326
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.4e-31 Score=298.73 Aligned_cols=247 Identities=17% Similarity=0.254 Sum_probs=201.8
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|..-++||+|+||.||-|+.. ++.+|+|.+.|+.. ....-+..-..|..+|..++.+.||.+--.|++.+.+++|
T Consensus 186 ~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRi--Kkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 186 TFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRI--KKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHH--HHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 5778899999999999999775 45699998876521 2223344456778899999999999999899999999999
Q ss_pred ecccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+..|. |+|.-+|...+ .+++.+++.++.+|+.||++||+.+||+||+||+|||+|+.|++.|+|+|+|..+ ++..
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei--~~g~ 341 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEI--PEGK 341 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEec--CCCC
Confidence 99999 59988886644 6999999999999999999999999999999999999999999999999999755 2222
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----HHHHHhcCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRRGQYDP 256 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~~~~~~~~~~~ 256 (1553)
+ .....||.+|||||++. ...|+...|.|||||+||||+.|+.||.... ...+.+.....
T Consensus 342 ~------~~~rvGT~GYMAPEvl~----------ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~ 405 (591)
T KOG0986|consen 342 P------IRGRVGTVGYMAPEVLQ----------NEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLED 405 (591)
T ss_pred c------cccccCcccccCHHHHc----------CCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcc
Confidence 2 23447899999999764 4458999999999999999999999996432 12233333344
Q ss_pred CCCCCCCCCHHHHHHHHHhcccCcCCCC-----CHHHHHHh
Q 000410 257 SQHLEKIPDSGIRKMILHMIQLEPELRF-----SAESYLQN 292 (1553)
Q Consensus 257 ~~~~~~~~~~~l~~LI~~mL~~dP~~Rp-----sa~elL~~ 292 (1553)
...++...++++++|.+.+|.+||.+|. +++++.+|
T Consensus 406 ~~ey~~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~H 446 (591)
T KOG0986|consen 406 PEEYSDKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEH 446 (591)
T ss_pred hhhcccccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhC
Confidence 4456667788999999999999999998 45677777
No 327
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=6e-30 Score=294.98 Aligned_cols=247 Identities=22% Similarity=0.241 Sum_probs=202.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+.+.||.|+||.||++.+. +..+++|++..... .......+.+|.++++.++|||++++++.+......++|
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv 77 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNM---SEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIV 77 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccC---ChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEE
Confidence 4888999999999999999997 46799999865421 134455677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 104 RQYFF-NSLRDRLSTP----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~----~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
+||++ ++|.+++... ..+++.++..++.|++.||.|||++|++||||+|+||+++.++.++|+|||.+.......
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 78 MEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred EEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 99999 4999999763 669999999999999999999999999999999999999999999999999887542221
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCC-CCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY-DPS 257 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~-~~~ 257 (1553)
.......+++.|+|||.+. ...++.++|+||+|+++++|++|.+||.......+..... ...
T Consensus 158 -------~~~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~ 220 (258)
T cd08215 158 -------DLAKTVVGTPYYLSPELCQ----------NKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQY 220 (258)
T ss_pred -------ceecceeeeecccChhHhc----------cCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCC
Confidence 1223345778899999764 3357789999999999999999999997665443332211 122
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..++...+..+.+++.+||..+|++||++.++|+|
T Consensus 221 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 255 (258)
T cd08215 221 PPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQS 255 (258)
T ss_pred CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 23444566789999999999999999999999987
No 328
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.97 E-value=2.9e-30 Score=303.15 Aligned_cols=248 Identities=23% Similarity=0.340 Sum_probs=195.9
Q ss_pred eEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--CEEEE
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD--KAAYL 102 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~--~~~~l 102 (1553)
|++.+.||+|+||.||+|.+.+ ..+++|++.... ........+.+|.++++.++|||++++++++..+ +..|+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~---~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l 77 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMEN---EKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYM 77 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEeccc---ccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEE
Confidence 5788999999999999999865 569999997652 1233445567788899999999999999999888 88999
Q ss_pred EeccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|+||++++|.+++... ..+++.++..++.||+.||+|||++|++|+||||+||++++++.++|+|||.+.........
T Consensus 78 v~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~- 156 (287)
T cd07840 78 VFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA- 156 (287)
T ss_pred EeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc-
Confidence 9999999999998765 56899999999999999999999999999999999999999999999999998765333210
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----HhcCCCC-
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQYDP- 256 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~~~~- 256 (1553)
......++..|+|||.+.+ ...++.++|||||||++|||++|.+||........ ......+
T Consensus 157 -----~~~~~~~~~~y~~PE~~~~---------~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~ 222 (287)
T cd07840 157 -----DYTNRVITLWYRPPELLLG---------ATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPT 222 (287)
T ss_pred -----cccccccccccCCceeeEc---------cccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCc
Confidence 1122235677999997642 23468899999999999999999999964432211 1100000
Q ss_pred C--------------------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 S--------------------------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ~--------------------------~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
. ..+....++.+.++|.+||+.||.+||++++++++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 284 (287)
T cd07840 223 DENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQH 284 (287)
T ss_pred hhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0 00111226788999999999999999999999987
No 329
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=3.3e-32 Score=309.50 Aligned_cols=255 Identities=20% Similarity=0.178 Sum_probs=211.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECCce--EEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEGL--VLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~~--vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+++.+..||-|+||.|-+++.+... +|+|+++|.... ....++.+..|+.+|..+..|.|+++|..|.+++++|+.
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIV--dtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIV--DTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhcc--chhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 6777889999999999999887654 899999877432 223445677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||-|- |.|+..++.++.+.+...+.++.-+++|++|||++|||+|||||||.|++.+|++||.|||+||.+....
T Consensus 499 mEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~---- 574 (732)
T KOG0614|consen 499 MEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR---- 574 (732)
T ss_pred HHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCC----
Confidence 99998 6999999999999999999999999999999999999999999999999999999999999999774322
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCC--CCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYD--PSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~--~~~~~ 260 (1553)
..-|.+|||.|.|||++.+.+ .+.++|.||||+++|||++|.|||...+..+....... ....+
T Consensus 575 ----KTwTFcGTpEYVAPEIILnKG----------HD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~ 640 (732)
T KOG0614|consen 575 ----KTWTFCGTPEYVAPEIILNKG----------HDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEF 640 (732)
T ss_pred ----ceeeecCCcccccchhhhccC----------cchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhc
Confidence 234678999999999987554 45689999999999999999999987654433222222 11235
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCC-----HHHHHHhhhcccCCCCCCchhh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFS-----AESYLQNYAAVVFPTYFSPFLH 307 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rps-----a~elL~~~~~~~fP~~f~~fl~ 307 (1553)
|........+||+++...+|.+|.. +.++-+| .||..|-.
T Consensus 641 Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH-------~Wf~gfdw 685 (732)
T KOG0614|consen 641 PRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKH-------RWFEGFDW 685 (732)
T ss_pred ccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhh-------hhhhcCCh
Confidence 5555678999999999999999985 7888888 45655533
No 330
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=5.8e-30 Score=305.60 Aligned_cols=246 Identities=18% Similarity=0.188 Sum_probs=197.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|...+.||+|+||.||++++.. ..+|+|++.+... ...+....+..|+++++.++|||++++++++.++...|+|
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 103 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGK--QSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLV 103 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCC--CchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEE
Confidence 47889999999999999999853 5699999865422 2234445677888999999999999999999999999999
Q ss_pred eccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+.|+|.+.+.. ...+++.++..++.|++.||.|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 104 ~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~------ 177 (317)
T cd06635 104 MEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP------ 177 (317)
T ss_pred EeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC------
Confidence 99999999888754 45589999999999999999999999999999999999999999999999998764311
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-H---HHHhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-L---AYRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~---~~~~~~~~~~~ 258 (1553)
.....+++.|+|||.+... ....++.++|+||+||++|||++|.+||..... . ........ .
T Consensus 178 -----~~~~~~~~~y~aPE~~~~~-------~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~--~ 243 (317)
T cd06635 178 -----ANSFVGTPYWMAPEVILAM-------DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESP--T 243 (317)
T ss_pred -----cccccCCccccChhhhhcC-------CCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCC--C
Confidence 1123467789999987421 134578899999999999999999888754322 1 22222211 1
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
......++.++++|.+||+.+|.+||++.++++|.
T Consensus 244 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 244 LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred CCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 12234457899999999999999999999999984
No 331
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.97 E-value=4.5e-30 Score=298.88 Aligned_cols=249 Identities=20% Similarity=0.192 Sum_probs=184.9
Q ss_pred EeeccCcEEEEEEEECC-c---eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 32 VLGGSRFFKSILCKHDE-G---LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 32 ~LG~G~fg~V~~a~~~~-~---~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
.||+|+||+||+++..+ . .+++|.+... ......+.+.+|..+++.++||||+++++.+.+....|+||||+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~----~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 77 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKAN----ASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYC 77 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCC----CChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecC
Confidence 69999999999997543 2 3556665432 11234556778888999999999999999999999999999999
Q ss_pred c-CCHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 108 F-NSLRDRLSTP----PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 108 ~-gsL~d~l~~~----~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+ |+|.+++... ..+++..++.++.||+.||+|||++|++||||||+|||++.++.++|+|||++......
T Consensus 78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~----- 152 (268)
T cd05086 78 ELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKE----- 152 (268)
T ss_pred CCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcc-----
Confidence 9 6999999753 23667788899999999999999999999999999999999999999999987532111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC-CCCCCchHHH-HH---Hhc-CCC-
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLL-AY---RRG-QYD- 255 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~pf~~~~~~-~~---~~~-~~~- 255 (1553)
..........++..|+|||.+....+. .....++.++|||||||++|||+++ .+||...... .+ ... ...
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~---~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 229 (268)
T cd05086 153 DYIETEDDKCVPLRWLAPELVGEFHGG---LITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKL 229 (268)
T ss_pred hhhhcccCCcCcccccCchhcccccCc---cccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhccccc
Confidence 001111233467789999987532211 1223568899999999999999975 7888543221 11 111 111
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 256 PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 256 ~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
..+.+....++.+.+++..|| .+|++||+++++++.+
T Consensus 230 ~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l 266 (268)
T cd05086 230 FKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLL 266 (268)
T ss_pred CCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHh
Confidence 223334445678999999999 6899999999998864
No 332
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.97 E-value=8.1e-30 Score=295.98 Aligned_cols=252 Identities=20% Similarity=0.211 Sum_probs=199.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC--CEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD--KAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~--~~~~ 101 (1553)
+|.+.+.||+|+||.||+|.+.. ..|++|++...............+.+|+++++.++||||+++++++.+. ...+
T Consensus 3 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (264)
T cd06653 3 NWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLS 82 (264)
T ss_pred ceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEE
Confidence 68999999999999999998753 6799998865422222334456788899999999999999999988664 5688
Q ss_pred EEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+++||++ ++|.+++...+.+++..++.++.|++.||.|||++|++||||||+||+++.++.++|+|||.++........
T Consensus 83 ~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~ 162 (264)
T cd06653 83 IFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMS 162 (264)
T ss_pred EEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcccccccccccccc
Confidence 9999998 599999987777899999999999999999999999999999999999999999999999998754221111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHHhcC-CCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRRGQ-YDPSQ 258 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~~~-~~~~~ 258 (1553)
... .....++..|+|||.+. +..++.++|+|||||++|+|++|++||.... .....+.. ....+
T Consensus 163 ~~~----~~~~~~~~~y~aPE~~~----------~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 228 (264)
T cd06653 163 GTG----IKSVTGTPYWMSPEVIS----------GEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPTKP 228 (264)
T ss_pred Ccc----ccccCCcccccCHhhhc----------CCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCCCC
Confidence 111 11234678899999764 2356789999999999999999999996443 22222222 12233
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.++...++.+.++|.+||. +|.+||++.++++|
T Consensus 229 ~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~ 261 (264)
T cd06653 229 MLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRH 261 (264)
T ss_pred CCCcccCHHHHHHHHHHhc-CcccCccHHHHhcC
Confidence 4555667789999999999 57999999999987
No 333
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-29 Score=268.86 Aligned_cols=262 Identities=23% Similarity=0.360 Sum_probs=215.6
Q ss_pred cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEe
Q 000410 1127 PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA 1206 (1553)
Q Consensus 1127 p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s 1206 (1553)
..|..+..|.||..-|+.++.++||.|++|||.||++++||+.+++ +.+.+.+|...|++++|+++.+.+++||
T Consensus 51 ~~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~------~t~~f~GH~~dVlsva~s~dn~qivSGS 124 (315)
T KOG0279|consen 51 KYGVPVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGE------STRRFVGHTKDVLSVAFSTDNRQIVSGS 124 (315)
T ss_pred ccCceeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCc------EEEEEEecCCceEEEEecCCCceeecCC
Confidence 3488999999999999999999999999999999999999999886 6778999999999999999999999999
Q ss_pred CCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceecc
Q 000410 1207 CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA 1286 (1553)
Q Consensus 1207 ~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~ 1286 (1553)
.|.+|++|++-... + .......+...|.|++|+|+. +..+|+.++.|++|++||+++-+....+.+
T Consensus 125 rDkTiklwnt~g~c-------k------~t~~~~~~~~WVscvrfsP~~-~~p~Ivs~s~DktvKvWnl~~~~l~~~~~g 190 (315)
T KOG0279|consen 125 RDKTIKLWNTLGVC-------K------YTIHEDSHREWVSCVRFSPNE-SNPIIVSASWDKTVKVWNLRNCQLRTTFIG 190 (315)
T ss_pred CcceeeeeeecccE-------E------EEEecCCCcCcEEEEEEcCCC-CCcEEEEccCCceEEEEccCCcchhhcccc
Confidence 99999999986210 1 111122236799999999984 356999999999999999999888888865
Q ss_pred CCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCe
Q 000410 1287 IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1366 (1553)
Q Consensus 1287 ~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~ 1366 (1553)
|.+.++.++++|||...++|+.||.+.+||++.++.+.++. +...|+.++| .|. .++++.+. +..
T Consensus 191 --h~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl~--a~~~v~sl~f-spn---------rywL~~at-~~s 255 (315)
T KOG0279|consen 191 --HSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSLE--AFDIVNSLCF-SPN---------RYWLCAAT-ATS 255 (315)
T ss_pred --ccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEecc--CCCeEeeEEe-cCC---------ceeEeecc-CCc
Confidence 99999999999999999999999999999999999977665 4567888888 553 44555554 445
Q ss_pred EEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-e
Q 000410 1367 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-D 1445 (1553)
Q Consensus 1367 V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~ 1445 (1553)
|+|||++++.|+..+....... ..........+++|+++| .
T Consensus 256 IkIwdl~~~~~v~~l~~d~~g~--------------------------------------s~~~~~~~clslaws~dG~t 297 (315)
T KOG0279|consen 256 IKIWDLESKAVVEELKLDGIGP--------------------------------------SSKAGDPICLSLAWSADGQT 297 (315)
T ss_pred eEEEeccchhhhhhcccccccc--------------------------------------ccccCCcEEEEEEEcCCCcE
Confidence 9999999999887776322100 001112245778999999 7
Q ss_pred EEEccCCCeEEEEeCC
Q 000410 1446 LLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1446 llTgg~Dg~IrlWDl~ 1461 (1553)
|++|-.|+.||+|.+.
T Consensus 298 Lf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 298 LFAGYTDNVIRVWQVA 313 (315)
T ss_pred EEeeecCCcEEEEEee
Confidence 8899999999999875
No 334
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.97 E-value=2.7e-30 Score=310.02 Aligned_cols=251 Identities=19% Similarity=0.162 Sum_probs=186.6
Q ss_pred EEeecc--CcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecc
Q 000410 31 EVLGGS--RFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQY 106 (1553)
Q Consensus 31 ~~LG~G--~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~ 106 (1553)
..||+| +|++||++++. ++.||+|++..... .....+.+.+|..+++.++||||+++++++..+...|+|+||
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~ 80 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENC---TEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPF 80 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccC---CHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEec
Confidence 456666 99999999984 47799999865421 123446788888899999999999999999999999999999
Q ss_pred cc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCC
Q 000410 107 FF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSD 183 (1553)
Q Consensus 107 ~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~ 183 (1553)
+. ++|.+++... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.++++||+.+............
T Consensus 81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 81 MAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred ccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 99 5999988753 34899999999999999999999999999999999999999999999999854322111111000
Q ss_pred cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH-H---HhcCC-CC--
Q 000410 184 FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-Y---RRGQY-DP-- 256 (1553)
Q Consensus 184 ~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-~---~~~~~-~~-- 256 (1553)
.........++..|+|||.+.+. ...++.++||||+||++|||++|.+||....... + ..... .+
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~--------~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 232 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQD--------LYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLD 232 (328)
T ss_pred cccccccccCccCccChhhhcCC--------CCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCcc
Confidence 00001112345669999987521 2347889999999999999999999996432111 1 11000 00
Q ss_pred ----------------------------------------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 ----------------------------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ----------------------------------------~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
........++.+.+||.+||+.||++|||++|+|+|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 233 ITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred ccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 000011234578999999999999999999999998
No 335
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.97 E-value=5.2e-30 Score=300.55 Aligned_cols=250 Identities=20% Similarity=0.227 Sum_probs=194.6
Q ss_pred ceEEEEEeeccCcEEEEEEEEC------CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe--C
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD------EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET--D 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~------~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~--~ 97 (1553)
+|++.+.||+|+||.||++.+. +..+|+|++..... ....+.+.+|+++++.+.||||+++++++.. .
T Consensus 5 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~----~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~ 80 (284)
T cd05038 5 HLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGE----EQHRSDFEREIEILRTLDHENIVKYKGVCEKPGG 80 (284)
T ss_pred hchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccc----hHHHHHHHHHHHHHHhCCCCChheEEeeeecCCC
Confidence 6788899999999999999864 25699999865422 1445678888899999999999999999877 5
Q ss_pred CEEEEEecccc-CCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccccc
Q 000410 98 KAAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTY 175 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~ 175 (1553)
...|++|||++ ++|.+++...+ .+++..+..++.||+.||+|||++|++||||||+||+++.++.++|+|||.+....
T Consensus 81 ~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05038 81 RSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLP 160 (284)
T ss_pred CceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccc
Confidence 67999999998 69999997654 58999999999999999999999999999999999999999999999999887653
Q ss_pred CCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH--------
Q 000410 176 IPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL-------- 247 (1553)
Q Consensus 176 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~-------- 247 (1553)
.... .........++..|+|||.+. ...++.++|||||||++|||++|..||......
T Consensus 161 ~~~~----~~~~~~~~~~~~~~~~Pe~~~----------~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~ 226 (284)
T cd05038 161 EDKD----YYYVKEPGESPIFWYAPECLR----------TSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIA 226 (284)
T ss_pred cCCc----ceeccCCCCCcccccCcHHHc----------cCCCCcccchHHHhhhhheeeccCCCcccccchhccccccc
Confidence 1111 111111223455699999764 336788999999999999999997776532111
Q ss_pred ----------HHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 248 ----------AYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 248 ----------~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
....... ....+...+..+.+++.+||+.||++||++.|+++.+..
T Consensus 227 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~ 282 (284)
T cd05038 227 QGQMIVTRLLELLKEGE--RLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDR 282 (284)
T ss_pred cccccHHHHHHHHHcCC--cCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhh
Confidence 1111111 111122335689999999999999999999999998754
No 336
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.97 E-value=2.7e-30 Score=298.64 Aligned_cols=236 Identities=20% Similarity=0.195 Sum_probs=183.1
Q ss_pred EEeeccCcEEEEEEEECCc------------eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 31 EVLGGSRFFKSILCKHDEG------------LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~~~------------~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
+.||+|+||.||+|.+.+. .+++|++.... .. ...+.+|..+++.++||||+++++++.. .
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-----~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~ 73 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDH-----RD-SLAFFETASLMSQLSHKHLVKLYGVCVR-D 73 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccch-----hh-HHHHHHHHHHHHcCCCcchhheeeEEec-C
Confidence 4689999999999998642 26777664321 11 5667788889999999999999999887 7
Q ss_pred EEEEEecccc-CCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC-------cEEEeecC
Q 000410 99 AAYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-------WLYLSDFA 169 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~-------~vkL~DFG 169 (1553)
..|+||||++ |+|.+++...+ .++...+..++.||+.||+|||++||+||||||+|||++.++ .+||+|||
T Consensus 74 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg 153 (259)
T cd05037 74 ENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPG 153 (259)
T ss_pred CcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCC
Confidence 7899999999 69999998765 689999999999999999999999999999999999999887 79999999
Q ss_pred ccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC-CCCCCchHHHH
Q 000410 170 SFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLA 248 (1553)
Q Consensus 170 ~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~pf~~~~~~~ 248 (1553)
++..... .....++..|+|||.+... ...++.++|||||||++|||++| .+||.......
T Consensus 154 ~a~~~~~-----------~~~~~~~~~y~aPE~~~~~--------~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~ 214 (259)
T cd05037 154 IPITVLS-----------REERVERIPWIAPECIRNG--------QASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE 214 (259)
T ss_pred ccccccc-----------ccccccCCCccChhhhcCC--------CCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh
Confidence 9875422 0122345679999977521 13678899999999999999995 77775432211
Q ss_pred HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 249 YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
.... +......+......+.++|.+||..+|.+||++.++++.+
T Consensus 215 ~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l 258 (259)
T cd05037 215 KERF-YQDQHRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDL 258 (259)
T ss_pred HHHH-HhcCCCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhc
Confidence 1110 0011111222236899999999999999999999999875
No 337
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.97 E-value=3.1e-30 Score=311.30 Aligned_cols=248 Identities=19% Similarity=0.262 Sum_probs=189.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
+|.+.+.||.|+||.||+|.+.. +.||+|++..... ...+.+.+|+++++.++||||+++++++...
T Consensus 6 ~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-----~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (342)
T cd07854 6 RYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-----QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTE 80 (342)
T ss_pred ceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC-----chHHHHHHHHHHHHhcCCCcchhhHhhhccccccccc
Confidence 79999999999999999998854 6799999865422 2334566788999999999999998776543
Q ss_pred --------CEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec-CCcEEEeec
Q 000410 98 --------KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS-WNWLYLSDF 168 (1553)
Q Consensus 98 --------~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~-~~~vkL~DF 168 (1553)
...|+||||++++|.+++... .+++..++.++.||+.||.|||++||+||||||+||+++. ++.++|+||
T Consensus 81 ~~~~~~~~~~~~lv~e~~~~~L~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~df 159 (342)
T cd07854 81 DVGSLTELNSVYIVQEYMETDLANVLEQG-PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDF 159 (342)
T ss_pred ccccccccceEEEEeecccccHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCc
Confidence 357999999999999988754 4899999999999999999999999999999999999985 457899999
Q ss_pred CccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH
Q 000410 169 ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA 248 (1553)
Q Consensus 169 G~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~ 248 (1553)
|.++........ ........++..|+|||.+.. ...++.++|||||||++|+|++|.+||.......
T Consensus 160 g~~~~~~~~~~~----~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~ 226 (342)
T cd07854 160 GLARIVDPHYSH----KGYLSEGLVTKWYRSPRLLLS---------PNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE 226 (342)
T ss_pred ccceecCCcccc----ccccccccccccccCHHHHhC---------ccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 998754221111 111122346778999997642 2357789999999999999999999996432111
Q ss_pred ----HHhc-----------------------CCCCC---CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 ----YRRG-----------------------QYDPS---QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 ----~~~~-----------------------~~~~~---~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.... ..... .......+.++++||.+||+.||++|||++++++|
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 227 QMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred HHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 0000 00000 00112345678999999999999999999999998
No 338
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=2.4e-30 Score=308.54 Aligned_cols=256 Identities=20% Similarity=0.162 Sum_probs=195.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEec
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQ 105 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E 105 (1553)
.+++++.+|.|+++.++++...+..||+|++.... ........+.+|+++++.++||||+++++++..+...|++||
T Consensus 3 ~~~i~~~~~~~~~v~~~~~~~~~~~~avK~~~~~~---~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e 79 (314)
T cd08216 3 LTLIGKCFEDLMIVHLAKHKPTNTLVAVKKINLDS---CSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSP 79 (314)
T ss_pred hhhhhHhhcCCceEEEEEecCCCCEEEEEEEeccc---cchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEe
Confidence 35667777888888888888777889999997542 112345568888999999999999999999999999999999
Q ss_pred ccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 106 YFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 106 ~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|++ |+|.+++... ..+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||.+...........
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 80 LMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred ccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 999 6999998753 3588999999999999999999999999999999999999999999999998875533222111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH-HH---HhcCCCC--
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL-AY---RRGQYDP-- 256 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~-~~---~~~~~~~-- 256 (1553)
..........++..|+|||.+... ...++.++|+||+||++|||++|.+||...... .+ ..+....
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~--------~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 231 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQN--------LQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLL 231 (314)
T ss_pred ccccccccccccccccCHHHhcCC--------CCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCcccc
Confidence 222222344567789999987521 234788999999999999999999998643211 11 1111000
Q ss_pred ----------------------------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 ----------------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 ----------------------------~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
........+..+.+|+.+||+.||++|||++++|+|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 232 DKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred ccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000001113568899999999999999999999998
No 339
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.97 E-value=8.5e-30 Score=303.56 Aligned_cols=247 Identities=19% Similarity=0.216 Sum_probs=195.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
-|...+.||+|+||.||+|++. +..|++|++..... ........+.+|.++++.++|||++++++++.+....|+|
T Consensus 22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 99 (313)
T cd06633 22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGK--QTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLV 99 (313)
T ss_pred HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEecccc--CchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence 3666788999999999999875 35699999865422 1223345677788999999999999999999999999999
Q ss_pred eccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+.|+|.+.+.. ...+++.++..++.||+.||.|||++||+||||||+||+++.++.++|+|||++.....
T Consensus 100 ~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~------ 173 (313)
T cd06633 100 MEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP------ 173 (313)
T ss_pred EecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC------
Confidence 99999999888865 34589999999999999999999999999999999999999999999999998753210
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-HHHHHh-cCCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-LLAYRR-GQYDPSQHL 260 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-~~~~~~-~~~~~~~~~ 260 (1553)
.....++..|+|||.+... ....++.++|||||||++|+|++|.+||...+ ...... .........
T Consensus 174 -----~~~~~~~~~y~aPE~~~~~-------~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 241 (313)
T cd06633 174 -----ANSFVGTPYWMAPEVILAM-------DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSPTLQ 241 (313)
T ss_pred -----CCCccccccccChhhcccc-------CCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCC
Confidence 1123467889999987421 13457889999999999999999988875433 222211 111112222
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
....+..+++|+.+||+.+|.+||++.++++|
T Consensus 242 ~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 242 SNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred ccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 33345679999999999999999999999987
No 340
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.97 E-value=1.8e-30 Score=311.89 Aligned_cols=251 Identities=20% Similarity=0.261 Sum_probs=198.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK----- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~----- 98 (1553)
+|++.+.||.|+||.||+|++.+ +.|++|++.+.. ......+.+.+|..+++.++||||+++++++....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~ 77 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVF---DDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFN 77 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeecccc---ccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCccccc
Confidence 48899999999999999999864 679999986542 11334456778889999999999999999987765
Q ss_pred EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 99 AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 99 ~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
..|++|||++++|.+++..+..+++..+..++.||+.||+|||++||+||||||+|||++.++.++|+|||.+.......
T Consensus 78 ~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~ 157 (330)
T cd07834 78 DVYIVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDE 157 (330)
T ss_pred ceEEEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccc
Confidence 78999999999999999887789999999999999999999999999999999999999999999999999988654332
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHH----hcCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYR----RGQY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~----~~~~ 254 (1553)
.... ......++..|+|||.+.+ ...++.++|+||+||++|+|++|.+||......... ....
T Consensus 158 ~~~~----~~~~~~~~~~y~aPE~~~~---------~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~ 224 (330)
T cd07834 158 DEKG----FLTEYVVTRWYRAPELLLS---------SSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLG 224 (330)
T ss_pred cccc----cccccccccCcCCceeeec---------ccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcC
Confidence 1111 1122346788999997742 126788999999999999999999999654322111 0000
Q ss_pred CC------------------------C---CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 DP------------------------S---QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ~~------------------------~---~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+ . .......+..+.++|.+||+.||++||+++++++|
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 225 TPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred CCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00 0 00111235679999999999999999999999988
No 341
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.97 E-value=5.2e-30 Score=304.02 Aligned_cols=248 Identities=16% Similarity=0.107 Sum_probs=192.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--Cc----eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EG----LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~----~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~ 99 (1553)
+|+..+.||+|+||.||+|.+. +. .+|+|++... ........+.+|..+++.++||||+++++++... .
T Consensus 8 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~ 82 (303)
T cd05110 8 ELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNET----TGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-T 82 (303)
T ss_pred hceeccccccCCCccEEEEEEecCCCcceeeEEEEecccc----CCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-C
Confidence 7889999999999999999874 22 3677777533 1233344577888899999999999999988754 4
Q ss_pred EEEEecccc-CCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
.++++||++ |+|.+++..+. .+++..+..++.|++.||.|||++||+||||||+||+++.++.+||+|||+++.....
T Consensus 83 ~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~ 162 (303)
T cd05110 83 IQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGD 162 (303)
T ss_pred ceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccCc
Confidence 678999999 79999987654 5899999999999999999999999999999999999999999999999998754221
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchH---HHHHHhcC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH---LLAYRRGQ 253 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~---~~~~~~~~ 253 (1553)
.. ........++..|+|||.+. +..++.++|||||||++|||++ |..||.... ...+....
T Consensus 163 ~~-----~~~~~~~~~~~~y~~PE~~~----------~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~ 227 (303)
T cd05110 163 EK-----EYNADGGKMPIKWMALECIH----------YRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKG 227 (303)
T ss_pred cc-----ccccCCCccccccCCHHHhc----------cCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC
Confidence 11 11112233456799999763 3467889999999999999997 788886432 22333222
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 254 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 254 ~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
... ..+...+..+.+++.+||..||++||+++++++.++.
T Consensus 228 ~~~--~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~ 267 (303)
T cd05110 228 ERL--PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSR 267 (303)
T ss_pred CCC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 211 1233456789999999999999999999999988653
No 342
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=3.3e-30 Score=298.60 Aligned_cols=248 Identities=19% Similarity=0.242 Sum_probs=194.0
Q ss_pred eeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-C
Q 000410 33 LGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF-N 109 (1553)
Q Consensus 33 LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~-g 109 (1553)
||.|+||.||++++. +..+++|++.+.. .......+.+.+|.++++.++||||+++++.++.++..|+++||+. +
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 78 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKAD--MIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGG 78 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchh--hhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCC
Confidence 689999999999996 4679999986542 1223456678888899999999999999999999999999999998 5
Q ss_pred CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC-CCCcceee
Q 000410 110 SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD-PSDFSFFF 188 (1553)
Q Consensus 110 sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~-~~~~~~~~ 188 (1553)
+|.+++...+.+++.++..++.||+.||.|||++|++||||+|+||+++.++.++|+|||++......... ........
T Consensus 79 ~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~ 158 (265)
T cd05579 79 DLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKED 158 (265)
T ss_pred cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccc
Confidence 99999987678999999999999999999999999999999999999999999999999988754332110 00000111
Q ss_pred ecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCC--CCH
Q 000410 189 DTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKI--PDS 266 (1553)
Q Consensus 189 ~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~--~~~ 266 (1553)
....++..|+|||.+. ....+.++|+|||||++|+|++|.+||..................++.. .+.
T Consensus 159 ~~~~~~~~~~~Pe~~~----------~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (265)
T cd05579 159 KRIVGTPDYIAPEVIL----------GQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWPEDVEVSD 228 (265)
T ss_pred cCcccCccccCHHHhc----------CCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCCccccCCH
Confidence 2233567799999764 2346789999999999999999999997554433222111111112222 267
Q ss_pred HHHHHHHHhcccCcCCCCCH---HHHHHh
Q 000410 267 GIRKMILHMIQLEPELRFSA---ESYLQN 292 (1553)
Q Consensus 267 ~l~~LI~~mL~~dP~~Rpsa---~elL~~ 292 (1553)
.+.++|.+||+.+|.+||++ .++|+|
T Consensus 229 ~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~ 257 (265)
T cd05579 229 EAIDLISKLLVPDPEKRLGAKSIEEIKNH 257 (265)
T ss_pred HHHHHHHHHhcCCHhhcCCCccHHHHhcC
Confidence 89999999999999999999 888887
No 343
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.97 E-value=5.9e-30 Score=295.42 Aligned_cols=247 Identities=20% Similarity=0.217 Sum_probs=196.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+.+.||+|+||.||++.... +.+|+|.+...... ....+.+.+|+.+++.++||||+++++.+..+...|+|
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv 77 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMP---VKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIV 77 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhcc---chhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEE
Confidence 48899999999999999999864 66999998654211 12234567888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC-cEEEeecCccccccCCCC
Q 000410 104 RQYFF-NSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-WLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~-~vkL~DFG~a~~~~~~~~ 179 (1553)
+||+. ++|.+++.... .+++..+..++.|++.||.|||++|++||||||+||++++++ .++|+|||.+.......
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~- 156 (257)
T cd08225 78 MEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM- 156 (257)
T ss_pred EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc-
Confidence 99998 59999986543 478999999999999999999999999999999999999886 46999999886542111
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCC-CCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYD-PSQ 258 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~-~~~ 258 (1553)
. ......|++.|+|||.+. ...++.++|+||+||++|||++|.+||...+.......... ...
T Consensus 157 ---~---~~~~~~~~~~~~ape~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~ 220 (257)
T cd08225 157 ---E---LAYTCVGTPYYLSPEICQ----------NRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFA 220 (257)
T ss_pred ---c---cccccCCCccccCHHHHc----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCC
Confidence 1 112335678899999764 34578899999999999999999999975543332221111 112
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
......+..++++|.+||..+|++|||+.++++|
T Consensus 221 ~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 221 PISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 2333445789999999999999999999999998
No 344
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.97 E-value=3.2e-30 Score=306.74 Aligned_cols=255 Identities=20% Similarity=0.282 Sum_probs=191.6
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
+|++.+.||.|+||.||+|.+. ++.+++|++....... .....+.+|.++++.++||||+++++++...
T Consensus 9 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 9 DYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKD---GFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCC---CcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 8999999999999999999985 3679999987542211 1122345677899999999999999877433
Q ss_pred --CEEEEEeccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccc
Q 000410 98 --KAAYLLRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174 (1553)
Q Consensus 98 --~~~~lV~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~ 174 (1553)
...|+||||+.++|.+.+.. ...+++.+++.++.||++||.|||++||+||||||+||++++++.++|+|||++...
T Consensus 86 ~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 165 (311)
T cd07866 86 KRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPY 165 (311)
T ss_pred cCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccchhc
Confidence 35799999999999888765 346999999999999999999999999999999999999999999999999988755
Q ss_pred cCCCCCCCC----cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH-
Q 000410 175 YIPYDDPSD----FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY- 249 (1553)
Q Consensus 175 ~~~~~~~~~----~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~- 249 (1553)
......... ....+....+++.|+|||.+.+ ...++.++||||+||++|||++|.+||........
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~ 236 (311)
T cd07866 166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLG---------ERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQL 236 (311)
T ss_pred cCCCcccccCCcccccccccceeccCcCChHHhhC---------CCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 332211110 1111223345788999997642 23578899999999999999999999964332211
Q ss_pred ---Hh--cCCCC---------------------CCCC---CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 250 ---RR--GQYDP---------------------SQHL---EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 250 ---~~--~~~~~---------------------~~~~---~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.. +...+ ...+ .....+.+.++|.+||+.||.+|||+.|++.|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~ 308 (311)
T cd07866 237 HLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEH 308 (311)
T ss_pred HHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcC
Confidence 00 00000 0000 01123578899999999999999999999988
No 345
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.97 E-value=3.8e-30 Score=309.71 Aligned_cols=258 Identities=17% Similarity=0.180 Sum_probs=195.4
Q ss_pred ceE-EEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCH---------HHHHHHHHHHHHHHhcCCCCCeeEEEEE
Q 000410 26 NLV-LKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDL---------REYERRLFHIRETFRSIDHPHVWAFQFW 93 (1553)
Q Consensus 26 ~y~-~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~---------~~~~~~l~~e~~~l~~l~hpnIv~~~~~ 93 (1553)
+|. +.+.||.|+||.||+|.+. +..||+|++......... ......+.+|.++++.++||||++++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 454 5678999999999999875 367999998654221110 0012246678889999999999999999
Q ss_pred EEeCCEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccc
Q 000410 94 QETDKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKP 173 (1553)
Q Consensus 94 ~~~~~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~ 173 (1553)
+..+...|+||||+.|+|.+++..+..+++..+..++.|++.||+|||++||+||||||+||+++.++.++|+|||.+..
T Consensus 89 ~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~ 168 (335)
T PTZ00024 89 YVEGDFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARR 168 (335)
T ss_pred EecCCcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceee
Confidence 99999999999999999999998888899999999999999999999999999999999999999999999999998875
Q ss_pred ccCCCCCCC-------CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH
Q 000410 174 TYIPYDDPS-------DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL 246 (1553)
Q Consensus 174 ~~~~~~~~~-------~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~ 246 (1553)
...+..... ..........+++.|+|||.+.+ ...++.++|||||||++|||++|.+||...+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 169 YGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMG---------AEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred cccccccccccccccccccccccccccccCCCCChhccc---------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 531110000 00111122345778999997642 23467899999999999999999999964432
Q ss_pred HH----HHh--c-C----CC---------C-----CC---CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 247 LA----YRR--G-Q----YD---------P-----SQ---HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 247 ~~----~~~--~-~----~~---------~-----~~---~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.. +.. + . +. + .. ......+..+.++|.+||+.||++||+++|++.|
T Consensus 240 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 240 IDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred HHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 11 110 0 0 00 0 00 0111235678999999999999999999999998
No 346
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=8.4e-30 Score=294.99 Aligned_cols=239 Identities=21% Similarity=0.224 Sum_probs=186.5
Q ss_pred EEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHH-HHhcCCCCCeeEEEEEEEeCCEEEEEeccc
Q 000410 31 EVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRE-TFRSIDHPHVWAFQFWQETDKAAYLLRQYF 107 (1553)
Q Consensus 31 ~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~-~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~ 107 (1553)
+.||.|+||.||+|.+. ++.||+|++.+... ........+..|.. +....+||||++++++++.++..|+|+||+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 79 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDM--IAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYL 79 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhh--hHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEecc
Confidence 57999999999999885 36799999865421 11122222333333 344568999999999999999999999999
Q ss_pred c-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcce
Q 000410 108 F-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSF 186 (1553)
Q Consensus 108 ~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~ 186 (1553)
+ ++|.+++...+.+++..+..++.||+.||.|||++|++||||+|+||+++.++.++|+|||+++....
T Consensus 80 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~---------- 149 (260)
T cd05611 80 NGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE---------- 149 (260)
T ss_pred CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc----------
Confidence 8 59999998877799999999999999999999999999999999999999999999999998864321
Q ss_pred eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----HhcCCCCCCCCCC
Q 000410 187 FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RRGQYDPSQHLEK 262 (1553)
Q Consensus 187 ~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~~~~~~~~~~~~ 262 (1553)
.....++..|+|||.+. +..++.++||||+|+++|+|++|.+||...+.... ..+..........
T Consensus 150 -~~~~~~~~~y~~pe~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (260)
T cd05611 150 -NKKFVGTPDYLAPETIL----------GVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKE 218 (260)
T ss_pred -cccCCCCcCccChhhhc----------CCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccc
Confidence 11223567799999764 23478899999999999999999999975543332 2222222222333
Q ss_pred CCCHHHHHHHHHhcccCcCCCCCH---HHHHHh
Q 000410 263 IPDSGIRKMILHMIQLEPELRFSA---ESYLQN 292 (1553)
Q Consensus 263 ~~~~~l~~LI~~mL~~dP~~Rpsa---~elL~~ 292 (1553)
..++.+.++|.+||+.||++||++ +|+++|
T Consensus 219 ~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~ 251 (260)
T cd05611 219 FCSPEAVDLINRLLCMDPAKRLGANGYQEIKSH 251 (260)
T ss_pred cCCHHHHHHHHHHccCCHHHccCCCcHHHHHcC
Confidence 456789999999999999999955 688777
No 347
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=1.8e-29 Score=297.00 Aligned_cols=244 Identities=18% Similarity=0.174 Sum_probs=192.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe--CCEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET--DKAAY 101 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~--~~~~~ 101 (1553)
+|...+.||.|++|.||+|.+.+ +.+|+|++..... ......+.+|+++++.++||||+++++++.. ....|
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 77 (287)
T cd06621 2 KIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN----PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIG 77 (287)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc----hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEE
Confidence 68899999999999999999854 6699999865421 2445667888899999999999999998754 34789
Q ss_pred EEecccc-CCHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccC
Q 000410 102 LLRQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~ 176 (1553)
+||||++ ++|.+++. ....+++..+..++.||+.||.|||+.|++||||+|+||+++.++.++|+|||++.....
T Consensus 78 lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 78 IAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 9999998 58988764 234589999999999999999999999999999999999999999999999998865432
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch--------HHHH
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS--------HLLA 248 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~--------~~~~ 248 (1553)
... ....++..|+|||.+. +..++.++|||||||++|+|++|..||... ....
T Consensus 158 ~~~---------~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~ 218 (287)
T cd06621 158 SLA---------GTFTGTSFYMAPERIQ----------GKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLS 218 (287)
T ss_pred ccc---------ccccCCccccCHHHhc----------CCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHH
Confidence 111 1223567799999764 345788999999999999999999998654 1122
Q ss_pred HHhcCCCCC--CCCC--CCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 YRRGQYDPS--QHLE--KIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 ~~~~~~~~~--~~~~--~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+......+. .... ...++.++++|.+||+.||.+|||+.|+++|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 219 YIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred HHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 222111110 0111 1234679999999999999999999999998
No 348
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.97 E-value=5.5e-30 Score=301.39 Aligned_cols=248 Identities=15% Similarity=0.080 Sum_probs=191.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~~~~l 102 (1553)
+|+..+.||+|+||.||++.+.. ..+|+|.+.+... ......+.+|..++.++. ||||+++++++..+...++
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~ 80 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVD----EKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI 80 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccC----hHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence 56778899999999999999864 6799999865421 134456777888888885 9999999999999999999
Q ss_pred EeccccCCHHHHh---c--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccC
Q 000410 103 LRQYFFNSLRDRL---S--TPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 103 V~E~~~gsL~d~l---~--~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~ 176 (1553)
+|||+.++|.++. . ....+++..+..++.|++.||+|||+ .||+||||||+||+++.++.++|+|||++.....
T Consensus 81 ~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 81 CMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred EEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 9999997665543 2 23568999999999999999999997 4999999999999999999999999999875432
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH--HHHHHhcCC
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH--LLAYRRGQY 254 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~--~~~~~~~~~ 254 (1553)
+... ....+++.|+|||.+.... ...++.++||||+||++|+|++|++||.... .....+...
T Consensus 161 ~~~~--------~~~~~~~~y~aPE~~~~~~-------~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~ 225 (288)
T cd06616 161 SIAK--------TRDAGCRPYMAPERIDPSA-------RDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVK 225 (288)
T ss_pred CCcc--------ccccCccCccCHHHhcccc-------ccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcC
Confidence 2111 1224677899999875221 2367889999999999999999999996432 122222111
Q ss_pred CCCCCC----CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 DPSQHL----EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ~~~~~~----~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+.+ ....+..+.+||.+||+.||++||+++++++|
T Consensus 226 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 226 GDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 111111 12246789999999999999999999999998
No 349
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.97 E-value=3.6e-30 Score=310.23 Aligned_cols=252 Identities=21% Similarity=0.329 Sum_probs=193.3
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeC--CEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETD--KAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~--~~~ 100 (1553)
+|++.+.||+|+||.||+|.+. +..+|+|.+.+... . ......+.+|..+++.+ +||||+++++++... ...
T Consensus 8 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~--~-~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 8 KYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFR--N-ATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred HHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccC--c-chhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 6888999999999999999885 35699998865311 1 12234466788899999 999999999988543 468
Q ss_pred EEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 101 YLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 101 ~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|+||||++++|.+++..+ .+++..+..++.||+.||.|||++||+||||||+||+++.++.++|+|||.+.........
T Consensus 85 ~lv~e~~~~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~ 163 (337)
T cd07852 85 YLVFEYMETDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN 163 (337)
T ss_pred EEEecccccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccccccc
Confidence 999999999999999876 6889999999999999999999999999999999999999999999999988755322211
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHh-----
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRR----- 251 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~----- 251 (1553)
.. ........++..|+|||.+.+ ...++.++||||+||++|+|++|++||....... +..
T Consensus 164 ~~--~~~~~~~~~~~~y~aPE~~~~---------~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~ 232 (337)
T cd07852 164 PE--NPVLTDYVATRWYRAPEILLG---------STRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPP 232 (337)
T ss_pred cc--CcchhcccccccccCceeeec---------cccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence 00 011122346788999997642 2356789999999999999999999996432111 000
Q ss_pred ----------------------cCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 ----------------------GQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ----------------------~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.............+..+.++|.+||+.||++|||+.++++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 233 SAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred CHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 00001111112245789999999999999999999999998
No 350
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.97 E-value=1e-29 Score=305.52 Aligned_cols=252 Identities=18% Similarity=0.219 Sum_probs=193.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEe----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQET---- 96 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~---- 96 (1553)
+|++.+.||+|+||.||++++.. ..||+|++.... ......+.+.+|.++++.+ +||||+++++....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~ 77 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVF---SKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGN 77 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccc---ccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecccc
Confidence 48899999999999999999864 369999985431 1122344566777888888 59999999986532
Q ss_pred CCEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccC
Q 000410 97 DKAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 97 ~~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~ 176 (1553)
....|++++|++++|.+++.....+++.+++.++.||+.||+|||++||+||||||+|||++.++.++|+|||.++....
T Consensus 78 ~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~ 157 (332)
T cd07857 78 FNELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSE 157 (332)
T ss_pred CCcEEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceeccc
Confidence 24689999999999999998877899999999999999999999999999999999999999999999999999875532
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHH----h-
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYR----R- 251 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~----~- 251 (1553)
..... ........|++.|+|||.+.+ ...++.++||||+||++|+|++|.+||...+..... .
T Consensus 158 ~~~~~---~~~~~~~~g~~~y~aPE~~~~---------~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~ 225 (332)
T cd07857 158 NPGEN---AGFMTEYVATRWYRAPEIMLS---------FQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQV 225 (332)
T ss_pred ccccc---cccccCcccCccccCcHHHhC---------CCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHH
Confidence 21111 111123457888999997642 235788999999999999999999999653321100 0
Q ss_pred ------------------------cCCC--CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 ------------------------GQYD--PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ------------------------~~~~--~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.... .........+..+++++.+||+.||++|||+.++++|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 226 LGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred hCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000 0011112235789999999999999999999999987
No 351
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.97 E-value=1.2e-29 Score=299.70 Aligned_cols=249 Identities=15% Similarity=0.139 Sum_probs=190.1
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~l 102 (1553)
+|++.+.||+|+||.||+|.+. +..||||++.+... ......+.++..++... .||||+++++++.++...|+
T Consensus 16 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~----~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 91 (296)
T cd06618 16 DLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGN----KEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFI 91 (296)
T ss_pred hheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCC----hHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEE
Confidence 7899999999999999999997 56799999975421 11223333444444444 59999999999999999999
Q ss_pred EeccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 103 LRQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 103 V~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+|||++++|.+.+.. ...+++..+..++.||+.||.|||+ .||+||||+|+||++++++.++|+|||.+........
T Consensus 92 v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~- 170 (296)
T cd06618 92 CMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKA- 170 (296)
T ss_pred EeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCc-
Confidence 999999888777754 3468999999999999999999997 6999999999999999999999999998865421111
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH--HHHHHhcCCCCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH--LLAYRRGQYDPSQ 258 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~--~~~~~~~~~~~~~ 258 (1553)
.....++..|+|||.+.... ....++.++|||||||++|+|++|++||.... ...+.........
T Consensus 171 -------~~~~~~~~~y~aPE~~~~~~------~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~ 237 (296)
T cd06618 171 -------KTRSAGCAAYMAPERIDPPD------PNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPP 237 (296)
T ss_pred -------ccCCCCCccccCHhhcCCCC------CccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCC
Confidence 11223567899999875321 12457889999999999999999999996522 1122111111111
Q ss_pred CC--CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HL--EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~--~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+ ....++++++||.+||..||++||+++++++|
T Consensus 238 ~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 238 SLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11 12346789999999999999999999999988
No 352
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.97 E-value=8.6e-30 Score=293.78 Aligned_cols=245 Identities=19% Similarity=0.250 Sum_probs=199.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||.||++.+.. ..+++|.+.+... .......+.+|.++++.++||||+++++++.+....|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v 77 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSM---SQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIV 77 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhc---cHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEE
Confidence 48899999999999999998753 5699999865421 123345566788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 104 RQYFF-NSLRDRLST----PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~----~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
|||++ ++|.+++.. +..+++..+..++.|++.||.|||++|++||||+|+||+++.++.+||+|||+++.....
T Consensus 78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 78 MEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred ehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 99998 599998865 355899999999999999999999999999999999999999999999999998765321
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCC-CCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY-DPS 257 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~-~~~ 257 (1553)
......+++.|+|||.+. +..++.++|+||+|+++|+|++|++||.......+..... ...
T Consensus 157 --------~~~~~~~~~~~~~Pe~~~----------~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~ 218 (256)
T cd08530 157 --------MAKTQIGTPHYMAPEVWK----------GRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKY 218 (256)
T ss_pred --------CcccccCCccccCHHHHC----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCC
Confidence 112334678899999764 3456789999999999999999999998665543322211 111
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+..+...+.+++++|.+||..+|++||++.++++|
T Consensus 219 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 219 PPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 22334556789999999999999999999999987
No 353
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.97 E-value=6.6e-30 Score=302.10 Aligned_cols=244 Identities=20% Similarity=0.205 Sum_probs=191.9
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|.....||.|+||.||++.+. +..||+|++..... ...+.+.+|+.+++.++||||+++++++..++..|++
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv 96 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ-----QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVL 96 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc-----chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEE
Confidence 3445568999999999999885 46799999865321 2234567788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||++ ++|.+++.. ..+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++........
T Consensus 97 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~--- 172 (297)
T cd06659 97 MEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--- 172 (297)
T ss_pred EecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc---
Confidence 99999 588887755 4589999999999999999999999999999999999999999999999998864321110
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HHHHh--cCCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LAYRR--GQYDPSQH 259 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~~~~--~~~~~~~~ 259 (1553)
......++..|+|||.+. +..++.++||||+||++|||++|.+||..... ..+.. ........
T Consensus 173 ----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 238 (297)
T cd06659 173 ----KRKSLVGTPYWMAPEVIS----------RTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLK 238 (297)
T ss_pred ----cccceecCccccCHHHHc----------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCcc
Confidence 012234678899999774 33568899999999999999999888854332 22221 11111111
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.....+..+.++|.+||+.+|++||+++++++|
T Consensus 239 ~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 239 NAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred ccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 222345689999999999999999999999997
No 354
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.97 E-value=1.2e-29 Score=306.12 Aligned_cols=244 Identities=20% Similarity=0.227 Sum_probs=192.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK----- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~----- 98 (1553)
+|++.+.||+|+||.||++.+. +..||+|++.+.. ........+.+|+.+++.++||||+++++++..+.
T Consensus 16 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 16 RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF---QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred ceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc---cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 7999999999999999999875 3669999986532 22344556778999999999999999999987654
Q ss_pred -EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 99 -AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 99 -~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
..|+||||++++|.+++... .+++..++.++.||+.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 93 ~~~~lv~e~~~~~l~~~~~~~-~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 171 (343)
T cd07880 93 HDFYLVMPFMGTDLGKLMKHE-KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE 171 (343)
T ss_pred ceEEEEEecCCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccC
Confidence 46899999988999888754 5899999999999999999999999999999999999999999999999988754211
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH----HHHhcC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL----AYRRGQ 253 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~----~~~~~~ 253 (1553)
.....+++.|+|||.+.+ ...++.++|+||+||++|+|++|.+||...... .+....
T Consensus 172 ----------~~~~~~~~~y~aPE~~~~---------~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~ 232 (343)
T cd07880 172 ----------MTGYVVTRWYRAPEVILN---------WMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVT 232 (343)
T ss_pred ----------ccccccCCcccCHHHHhC---------CCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 112245778999997742 124688999999999999999999999643221 111100
Q ss_pred CC-----------------------C----CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 YD-----------------------P----SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ~~-----------------------~----~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.. . ...+....++.+.++|.+||+.||++|||+.++++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 233 GTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred CCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00 0 001112345678999999999999999999999987
No 355
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.97 E-value=8.7e-30 Score=307.37 Aligned_cols=243 Identities=19% Similarity=0.256 Sum_probs=189.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
+|.+.+.||.|+||.||+|.+. +..||+|++.+... .+.....+.+|+.+++.+.||||+++++++...
T Consensus 16 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 16 RYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ---SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred ceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc---cccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 7899999999999999999875 46799999865421 122344567788999999999999999988654
Q ss_pred CEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 98 KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
...|+|+||+.++|.+++. ..+++.++..++.|++.||+|||++||+||||||+|||++.++.++|+|||+++.....
T Consensus 93 ~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~ 170 (342)
T cd07879 93 QDFYLVMPYMQTDLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAE 170 (342)
T ss_pred ceEEEEecccccCHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC
Confidence 3469999999988888764 34899999999999999999999999999999999999999999999999998753111
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQ 253 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~ 253 (1553)
. ....++..|+|||.+.+ ...++.++|||||||++|||++|+.||....... +....
T Consensus 171 ------~----~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~ 231 (342)
T cd07879 171 ------M----TGYVVTRWYRAPEVILN---------WMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVT 231 (342)
T ss_pred ------C----CCceeeecccChhhhcC---------ccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence 0 12235678999997642 2357889999999999999999999997543211 11000
Q ss_pred ----------------------CC--CCCC---CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 ----------------------YD--PSQH---LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ----------------------~~--~~~~---~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.. +... .....++.+.+||.+||+.||++||++++++.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h 297 (342)
T cd07879 232 GVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEH 297 (342)
T ss_pred CCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 0000 011235678999999999999999999999988
No 356
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.97 E-value=1.4e-29 Score=297.35 Aligned_cols=245 Identities=21% Similarity=0.196 Sum_probs=186.7
Q ss_pred eEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHh---cCCCCCeeEEEEEEEeCCE--
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFR---SIDHPHVWAFQFWQETDKA-- 99 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~---~l~hpnIv~~~~~~~~~~~-- 99 (1553)
|++.+.||+|+||.||+|++.. ..||+|++...... ......+..|..+++ .++||||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~ 77 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSE---EGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDR 77 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEecccccc---chhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCC
Confidence 5788999999999999999864 67999999754221 112223444545554 4469999999999987766
Q ss_pred ---EEEEeccccCCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccc
Q 000410 100 ---AYLLRQYFFNSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174 (1553)
Q Consensus 100 ---~~lV~E~~~gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~ 174 (1553)
.|++|||+.++|.+++...+ .+++.++..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+...
T Consensus 78 ~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~ 157 (287)
T cd07838 78 ELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIY 157 (287)
T ss_pred CceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceec
Confidence 99999999999999886543 4899999999999999999999999999999999999999999999999988765
Q ss_pred cCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HH
Q 000410 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YR 250 (1553)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~ 250 (1553)
..... .....++..|+|||.+. +..++.++|+||+||++|||++|.+||....... +.
T Consensus 158 ~~~~~--------~~~~~~~~~~~~PE~~~----------~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~ 219 (287)
T cd07838 158 SFEMA--------LTSVVVTLWYRAPEVLL----------QSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIF 219 (287)
T ss_pred cCCcc--------cccccccccccChHHhc----------cCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHH
Confidence 22111 11223577899999764 3356789999999999999999999997543221 11
Q ss_pred hcC------------------CCCC--CCC---CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 251 RGQ------------------YDPS--QHL---EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 251 ~~~------------------~~~~--~~~---~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... +... ... ....++.+.++|.+||+.||.+||+++++++|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~ 284 (287)
T cd07838 220 DVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQH 284 (287)
T ss_pred HHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcC
Confidence 100 0000 000 00123578899999999999999999999987
No 357
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=1.9e-29 Score=293.44 Aligned_cols=236 Identities=24% Similarity=0.275 Sum_probs=183.5
Q ss_pred ceEEEEE--eeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEE
Q 000410 26 NLVLKEV--LGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 26 ~y~~~~~--LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
+|.+.+. ||+|+||.||++.+.. ..+|+|++.+.... ..+... ..++ .+||||+++++.+..++..|
T Consensus 15 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~----~~e~~~---~~~~--~~h~~iv~~~~~~~~~~~~~ 85 (267)
T PHA03390 15 NCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN----AIEPMV---HQLM--KDNPNFIKLYYSVTTLKGHV 85 (267)
T ss_pred hhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc----hhhHHH---HHHh--hcCCCEEEEEEEEecCCeeE
Confidence 3444444 5999999999999854 56999998654111 110000 0111 26999999999999999999
Q ss_pred EEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC-cEEEeecCccccccCCCC
Q 000410 102 LLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-WLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 102 lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~-~vkL~DFG~a~~~~~~~~ 179 (1553)
+||||++ ++|.+++..+..+++.++..++.||+.||.|||+.|++||||||+||+++.++ .++|+|||.+......
T Consensus 86 iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~-- 163 (267)
T PHA03390 86 LIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP-- 163 (267)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCCC--
Confidence 9999998 69999998877899999999999999999999999999999999999999988 9999999988654211
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-----HHHHHhcCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-----LLAYRRGQY 254 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-----~~~~~~~~~ 254 (1553)
....++..|+|||.+. +..++.++|+||+||++|+|++|..||.... ...+....
T Consensus 164 ---------~~~~~~~~y~aPE~~~----------~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~- 223 (267)
T PHA03390 164 ---------SCYDGTLDYFSPEKIK----------GHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ- 223 (267)
T ss_pred ---------ccCCCCCcccChhhhc----------CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-
Confidence 1224678899999764 3456789999999999999999999996432 12222222
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCC-HHHHHHh
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFS-AESYLQN 292 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rps-a~elL~~ 292 (1553)
..........++.++++|.+||+.||.+||+ ++|+|+|
T Consensus 224 ~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h 262 (267)
T PHA03390 224 QKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKH 262 (267)
T ss_pred cccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcC
Confidence 2222233456789999999999999999996 5999988
No 358
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.97 E-value=1.2e-29 Score=298.16 Aligned_cols=243 Identities=17% Similarity=0.173 Sum_probs=197.5
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|+..+.||+|+||.||++.+. ++.+++|++..... ....+.+|.+.++.++||||+++++.+..+...|++
T Consensus 20 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 93 (286)
T cd06614 20 LYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ------NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVV 93 (286)
T ss_pred cchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch------hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEE
Confidence 5788899999999999999997 57799999965421 345567788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
+||++ ++|.+++...+ .+++.++..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+.........
T Consensus 94 ~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~- 172 (286)
T cd06614 94 MEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSK- 172 (286)
T ss_pred EeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhh-
Confidence 99999 69999998876 7999999999999999999999999999999999999999999999999987644221110
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~ 257 (1553)
.....++..|+|||.+. +..++.++|+|||||++|+|++|.+||....... .........
T Consensus 173 ------~~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 236 (286)
T cd06614 173 ------RNSVVGTPYWMAPEVIK----------RKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPL 236 (286)
T ss_pred ------hccccCCcccCCHhHhc----------CCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC
Confidence 11223567899999764 3357889999999999999999999987543221 111111111
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
......+..++++|.+||+.+|.+||++.+++++
T Consensus 237 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 237 -KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred -cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1122245789999999999999999999999987
No 359
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.97 E-value=1.4e-29 Score=298.72 Aligned_cols=244 Identities=17% Similarity=0.146 Sum_probs=194.2
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||+|+||.||++... ++.|++|.+.... ....+.+.+|..+++.++||||+++++++......|+|
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv 94 (293)
T cd06647 20 KYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ-----QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVV 94 (293)
T ss_pred hceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc-----chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEE
Confidence 7899999999999999999864 4679999985431 12234567788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||++ ++|.+++.+. .+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++........
T Consensus 95 ~e~~~~~~L~~~~~~~-~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~--- 170 (293)
T cd06647 95 MEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--- 170 (293)
T ss_pred EecCCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc---
Confidence 99998 5999998765 478999999999999999999999999999999999999999999999998764421111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcC-CC--CCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQ-YD--PSQH 259 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~-~~--~~~~ 259 (1553)
......+++.|+|||.+. ...++.++|+||+||++|+|++|.+||...+........ .. +...
T Consensus 171 ----~~~~~~~~~~y~~PE~~~----------~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~ 236 (293)
T cd06647 171 ----KRSTMVGTPYWMAPEVVT----------RKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQ 236 (293)
T ss_pred ----ccccccCChhhcCchhhc----------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCC
Confidence 112234678899999764 235688999999999999999999999755432211111 01 1111
Q ss_pred CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 260 ~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+...+..++++|.+||..+|++||++++++.|
T Consensus 237 ~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 237 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 222335689999999999999999999999988
No 360
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.97 E-value=6.2e-30 Score=308.77 Aligned_cols=244 Identities=20% Similarity=0.220 Sum_probs=192.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA---- 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~---- 99 (1553)
+|++.+.||+|+||.||+|++.. ..||+|++.... ........+.+|..+++.+.||||+++++++..+..
T Consensus 16 ~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 16 RYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPF---QSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ceEEEEEeccCCceEEEEEEECCCCcEEEEEeccccc---chhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 78999999999999999999864 569999886431 112334556678899999999999999887765544
Q ss_pred --EEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 100 --AYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 100 --~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
.|+|+||++++|.+++... .+++.++..++.||+.||.|||++||+||||||+||+++.++.++|+|||.+......
T Consensus 93 ~~~~lv~e~~~~~L~~~~~~~-~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~ 171 (343)
T cd07851 93 QDVYLVTHLMGADLNNIVKCQ-KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE 171 (343)
T ss_pred ccEEEEEecCCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccccccc
Confidence 8999999999999999764 5899999999999999999999999999999999999999999999999998754211
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQ 253 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~ 253 (1553)
.....++..|+|||.+.+ ...++.++|||||||++|+|++|++||....... +....
T Consensus 172 ----------~~~~~~~~~y~aPE~~~~---------~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~ 232 (343)
T cd07851 172 ----------MTGYVATRWYRAPEIMLN---------WMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLV 232 (343)
T ss_pred ----------ccCCcccccccCHHHHhC---------CCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhc
Confidence 122345778999997642 2256889999999999999999999996433221 11100
Q ss_pred CC------------------------CCC---CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 YD------------------------PSQ---HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ~~------------------------~~~---~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.. ... ......++.+.++|.+||+.||++|||+.++++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 233 GTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred CCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 00 000 0111236789999999999999999999999998
No 361
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.97 E-value=1.4e-29 Score=295.24 Aligned_cols=251 Identities=14% Similarity=0.068 Sum_probs=189.4
Q ss_pred eEEEEEeeccCcEEEEEEEEC-----CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC---
Q 000410 27 LVLKEVLGGSRFFKSILCKHD-----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK--- 98 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~-----~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~--- 98 (1553)
|++.+.||+|+||.||+|... +..||||++.... ......+++.+|..+++.++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 77 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADI---FSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKG 77 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEecccc---CChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCC
Confidence 567889999999999999863 2569999986542 11233455778889999999999999999875432
Q ss_pred ---EEEEEecccc-CCHHHHhcC-----C-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeec
Q 000410 99 ---AAYLLRQYFF-NSLRDRLST-----P-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF 168 (1553)
Q Consensus 99 ---~~~lV~E~~~-gsL~d~l~~-----~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DF 168 (1553)
..++++||+. |+|.+++.. + ..++...+..++.|++.||+|||++||+||||||+||+++.++.+||+||
T Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 78 RLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred cccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcc
Confidence 3578999998 699887632 1 14788999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHH
Q 000410 169 ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLL 247 (1553)
Q Consensus 169 G~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~ 247 (1553)
|.++....... ........+++.|++||.+. ...++.++|||||||++|||++ |.+||......
T Consensus 158 g~~~~~~~~~~-----~~~~~~~~~~~~~~~pe~~~----------~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~ 222 (273)
T cd05074 158 GLSKKIYSGDY-----YRQGCASKLPVKWLALESLA----------DNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENS 222 (273)
T ss_pred cccccccCCcc-----eecCCCccCchhhcCHhHHh----------cCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHH
Confidence 98875422110 00111223456799999664 3456789999999999999999 78998655433
Q ss_pred HHHhcCCC-CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 248 AYRRGQYD-PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 248 ~~~~~~~~-~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
........ .....+...++.+.+++.+||+.+|++||++.++++.+..
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~ 271 (273)
T cd05074 223 EIYNYLIKGNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLEL 271 (273)
T ss_pred HHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHh
Confidence 22211111 1111222345789999999999999999999999998754
No 362
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.97 E-value=2.2e-29 Score=304.11 Aligned_cols=244 Identities=19% Similarity=0.171 Sum_probs=190.6
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
+|++.+.||+|+||.||+|.+. +..||+|++.+.. ......+.+.+|+.+++.++||||+++++++...
T Consensus 18 ~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (345)
T cd07877 18 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF---QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 94 (345)
T ss_pred ceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcc---hhhHHHHHHHHHHHHHHHcCCCcccceeeeeeeccccccc
Confidence 7899999999999999999874 3569999986531 1122345567788999999999999999988543
Q ss_pred CEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 98 KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
...|++++++.++|.+++..+ .+++..+..++.||+.||+|||++||+||||||+||+++.++.++|+|||++......
T Consensus 95 ~~~~lv~~~~~~~L~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~ 173 (345)
T cd07877 95 NDVYLVTHLMGADLNNIVKCQ-KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 173 (345)
T ss_pred ccEEEEehhcccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEeccccccccccc
Confidence 347899999988999888765 4899999999999999999999999999999999999999999999999988754211
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HHHHhcC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRGQ 253 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~~~~~~ 253 (1553)
.....++..|+|||.+.+ ...++.++||||+||++|+|++|.+||..... ..+.+..
T Consensus 174 ----------~~~~~~~~~y~aPE~~~~---------~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 234 (345)
T cd07877 174 ----------MTGYVATRWYRAPEIMLN---------WMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLV 234 (345)
T ss_pred ----------ccccccCCCccCHHHHhC---------ccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence 112346788999997642 23567899999999999999999999963321 1111100
Q ss_pred ------------------------CCCCCC---CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 ------------------------YDPSQH---LEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ------------------------~~~~~~---~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+... .....++.++++|.+||+.||.+||++.++++|
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 235 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 000000 011235679999999999999999999999998
No 363
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.97 E-value=1.6e-29 Score=303.08 Aligned_cols=244 Identities=19% Similarity=0.240 Sum_probs=191.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe-CCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET-DKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~-~~~~~l 102 (1553)
+|++.+.||.|+||.||+|.+.. ..||+|++.+... .....+.+..|.++++.++||||+++++++.. ....|+
T Consensus 11 ~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~l 87 (328)
T cd07856 11 RYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFS---TPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDIYF 87 (328)
T ss_pred ceEEEEeecccCCeEEEEEEECCCCCEEEEEEeccccc---ccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcEEE
Confidence 79999999999999999998763 5699998865421 12234556678899999999999999998865 567899
Q ss_pred EeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 103 LRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 103 V~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
++||++++|.+++...+ +++..+..++.||++||.|||++||+||||||.|||++.++.++|+|||.+......
T Consensus 88 v~e~~~~~L~~~~~~~~-~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~----- 161 (328)
T cd07856 88 VTELLGTDLHRLLTSRP-LEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ----- 161 (328)
T ss_pred EeehhccCHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCC-----
Confidence 99999999998887654 788899999999999999999999999999999999999999999999988743111
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH--------------
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-------------- 248 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~-------------- 248 (1553)
.....++..|+|||.+.+ ...++.++||||+||++|+|++|.+||.......
T Consensus 162 -----~~~~~~~~~y~aPE~~~~---------~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~ 227 (328)
T cd07856 162 -----MTGYVSTRYYRAPEIMLT---------WQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPD 227 (328)
T ss_pred -----cCCCcccccccCceeeec---------cCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 112245678999997531 2357889999999999999999999996432110
Q ss_pred -HHh-------------cCCC---CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 -YRR-------------GQYD---PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 -~~~-------------~~~~---~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
... .... +........++.++++|.+||+.+|++||++++++.|
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 228 DVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000 0000 0000112235789999999999999999999999988
No 364
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.97 E-value=2.1e-29 Score=296.48 Aligned_cols=252 Identities=21% Similarity=0.255 Sum_probs=194.6
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-----CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-----~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~ 99 (1553)
+|++.+.||+|+||.||+++.. +..||||++.+... .........+.+|..++..+ +||||+++++.+..+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~-~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~ 79 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATI-VQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTK 79 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHH-HhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCE
Confidence 4788999999999999999863 35699999875411 12233445677888899999 59999999999999999
Q ss_pred EEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
.|+||||+. ++|.+++..+..+++.+++.++.|++.||.|||+.|++||||||+||+++.++.++|+|||++.......
T Consensus 80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 159 (288)
T cd05583 80 LHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE 159 (288)
T ss_pred EEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccc
Confidence 999999999 5999999877779999999999999999999999999999999999999999999999999876542221
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch----HHHHHHhcCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS----HLLAYRRGQY 254 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~----~~~~~~~~~~ 254 (1553)
.. ......++..|+|||.+.+. ....+.++|+||+|+++|||++|..||... ....+.+...
T Consensus 160 ~~------~~~~~~~~~~y~aPE~~~~~--------~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~ 225 (288)
T cd05583 160 EE------RAYSFCGTIEYMAPEVIRGG--------SGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRIL 225 (288)
T ss_pred cc------ccccccCCccccCHHHhcCC--------CCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHH
Confidence 10 01123467889999976421 123678999999999999999999998532 1222222222
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHH---HHHHh
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAE---SYLQN 292 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~---elL~~ 292 (1553)
......+...+..++++|.+||+.||++|||+. ++|+|
T Consensus 226 ~~~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 226 KSKPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred ccCCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 222233444567899999999999999999865 45555
No 365
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.97 E-value=1.6e-29 Score=300.54 Aligned_cols=245 Identities=17% Similarity=0.178 Sum_probs=194.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|...+.||.|+||.||+|++.. ..+++|.+..... ........+.+|+++++.++|||++++++++......|+|
T Consensus 16 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 93 (308)
T cd06634 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGK--QSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 93 (308)
T ss_pred HHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccc--cChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEE
Confidence 57788999999999999999854 5699998864311 1223345567788999999999999999999999999999
Q ss_pred eccccCCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFFNSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
|||+.|+|.+.+.. ...+++.++..++.|++.||.|||++|++||||||+||+++.++.++|+|||++......
T Consensus 94 ~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~----- 168 (308)
T cd06634 94 MEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----- 168 (308)
T ss_pred EEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc-----
Confidence 99999999887753 445899999999999999999999999999999999999999999999999987644211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH----HHHHhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~----~~~~~~~~~~~~ 258 (1553)
....+++.|+|||.+... ....++.++|||||||++|+|++|.+||...+. ..+..+.. ..
T Consensus 169 ------~~~~~~~~y~aPE~~~~~-------~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--~~ 233 (308)
T cd06634 169 ------NXFVGTPYWMAPEVILAM-------DEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES--PA 233 (308)
T ss_pred ------ccccCCccccCHHHHhhc-------ccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC--CC
Confidence 122357789999987421 123567899999999999999999887753321 11222221 11
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
......+..++++|.+||..+|++||+++++++|
T Consensus 234 ~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 234 LQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred cCcccccHHHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 1233456789999999999999999999999998
No 366
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.97 E-value=1.7e-29 Score=290.43 Aligned_cols=241 Identities=22% Similarity=0.270 Sum_probs=196.0
Q ss_pred eeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-C
Q 000410 33 LGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF-N 109 (1553)
Q Consensus 33 LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~-g 109 (1553)
||.|+||.||++.+. +..+++|++.+... ........+..|+.+++.++||||+++++.++.+...|+||||++ +
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 78 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKI--IKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGG 78 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhh--cchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCC
Confidence 699999999999986 46799999876521 122345567788899999999999999999999999999999996 7
Q ss_pred CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceeee
Q 000410 110 SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFD 189 (1553)
Q Consensus 110 sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~ 189 (1553)
+|.+++.....+++.++..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.+....... ....
T Consensus 79 ~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~-------~~~~ 151 (250)
T cd05123 79 ELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG-------SRTN 151 (250)
T ss_pred cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCC-------Cccc
Confidence 999999887779999999999999999999999999999999999999999999999999887552211 1112
Q ss_pred cCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCHHHH
Q 000410 190 TGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIR 269 (1553)
Q Consensus 190 ~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 269 (1553)
...++..|+|||.+. +...+.++|+|||||++|+|++|..||.........+........++...+..+.
T Consensus 152 ~~~~~~~~~~Pe~~~----------~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 221 (250)
T cd05123 152 TFCGTPEYLAPEVLL----------GKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFLSPEAR 221 (250)
T ss_pred CCcCCccccChHHhC----------CCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCCCCCCHHHH
Confidence 334677899999764 2346789999999999999999999997555333222222223335555577899
Q ss_pred HHHHHhcccCcCCCCCH---HHHHHh
Q 000410 270 KMILHMIQLEPELRFSA---ESYLQN 292 (1553)
Q Consensus 270 ~LI~~mL~~dP~~Rpsa---~elL~~ 292 (1553)
++|.+||..||++||++ +++++|
T Consensus 222 ~~i~~~l~~~p~~R~~~~~~~~l~~~ 247 (250)
T cd05123 222 DLISGLLQKDPTKRLGSGGAEEIKAH 247 (250)
T ss_pred HHHHHHhcCCHhhCCCcccHHHHHhC
Confidence 99999999999999999 888887
No 367
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.97 E-value=1.8e-29 Score=299.11 Aligned_cols=249 Identities=22% Similarity=0.351 Sum_probs=192.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK----- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~----- 98 (1553)
+|++.+.||.|+||.||+|.+.. ..|++|++...... ......+.+|.++++.++||||+++++++.+..
T Consensus 8 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~---~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~ 84 (302)
T cd07864 8 KFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEK---EGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDF 84 (302)
T ss_pred hhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccc---cCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhc
Confidence 68899999999999999999863 56999998654221 122234566778999999999999999887654
Q ss_pred -----EEEEEeccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccc
Q 000410 99 -----AAYLLRQYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 99 -----~~~lV~E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~ 172 (1553)
..|+|+||++++|.+.+... ..+++.++..++.||+.||+|||++||+||||||+||++++++.+||+|||.+.
T Consensus 85 ~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~ 164 (302)
T cd07864 85 KKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLAR 164 (302)
T ss_pred cccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCcccccc
Confidence 79999999999998888764 358999999999999999999999999999999999999999999999999887
Q ss_pred cccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----
Q 000410 173 PTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA---- 248 (1553)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~---- 248 (1553)
........+ .....++..|+|||.+.+ ...++.++||||+||++|||++|++||.......
T Consensus 165 ~~~~~~~~~------~~~~~~~~~y~~PE~~~~---------~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~ 229 (302)
T cd07864 165 LYNSEESRP------YTNKVITLWYRPPELLLG---------EERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLEL 229 (302)
T ss_pred cccCCcccc------cccceeccCccChHHhcC---------CCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Confidence 542221111 111234667999997642 2346789999999999999999999997443211
Q ss_pred HHhcCCCC-C-------------------------CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 YRRGQYDP-S-------------------------QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 ~~~~~~~~-~-------------------------~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.+....+ . .......+..+.++|.+||+.||.+||+++++++|
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 299 (302)
T cd07864 230 ISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNS 299 (302)
T ss_pred HHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 11100000 0 00111236789999999999999999999999987
No 368
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.97 E-value=9.4e-30 Score=294.58 Aligned_cols=249 Identities=23% Similarity=0.271 Sum_probs=193.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+.+.||+|+||.||++++.. ..+++|++...............+..|..+++.++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 48899999999999999998864 3366666543211111111223455677899999999999999999988899999
Q ss_pred ecccc-CCHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 104 RQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
+||++ ++|.+++. ....+++.+++.++.|++.||.|||++|++||||||+||+++. +.++|+|||.++......
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~ 159 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC 159 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence 99999 59988774 2456899999999999999999999999999999999999975 679999999887653221
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCC-CCC
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQY-DPS 257 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~-~~~ 257 (1553)
. ......+++.|+|||.+. ...++.++|+||+|+++|+|++|..||............. ...
T Consensus 160 ~-------~~~~~~~~~~~~~pe~~~----------~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 222 (260)
T cd08222 160 D-------LATTFTGTPYYMSPEALK----------HQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPT 222 (260)
T ss_pred c-------cccCCCCCcCccCHHHHc----------cCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCC
Confidence 1 112344678899999764 2346778999999999999999999997655443322221 222
Q ss_pred CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 258 ~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+..+...+..+.++|.+||..||++||++.++++|
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 257 (260)
T cd08222 223 PSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRN 257 (260)
T ss_pred CCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhC
Confidence 33445556789999999999999999999999998
No 369
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.97 E-value=1e-29 Score=298.13 Aligned_cols=245 Identities=22% Similarity=0.295 Sum_probs=190.7
Q ss_pred eEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEEEEeCCEEEEE
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~~~~~~~~~lV 103 (1553)
|++.+.||+|+||.||+|...+ +.|++|.+.+..... ......+|...++.+. ||||+++++++..+...|+|
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv 76 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW----EECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFV 76 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccch----hHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEE
Confidence 6788999999999999999853 569999986542211 1122335667888888 99999999999999999999
Q ss_pred eccccCCHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 104 RQYFFNSLRDRLSTPP--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~E~~~gsL~d~l~~~~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|||+.|+|.+++.... .+++.++..++.|++.||.|||++|++|+||||+||+++.++.++|+|||.++.......
T Consensus 77 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 154 (283)
T cd07830 77 FEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP-- 154 (283)
T ss_pred EecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC--
Confidence 9999999999997654 689999999999999999999999999999999999999999999999998875422111
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhc-----
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRG----- 252 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~----- 252 (1553)
.....++..|+|||.+.. ...++.++|+||||++++||++|.+||....... ....
T Consensus 155 ------~~~~~~~~~~~aPE~~~~---------~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 219 (283)
T cd07830 155 ------YTDYVSTRWYRAPEILLR---------STSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPT 219 (283)
T ss_pred ------cCCCCCcccccCceeeec---------CcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCC
Confidence 122345778999997642 2356889999999999999999999996433211 1000
Q ss_pred ------------CC--C----C---CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 253 ------------QY--D----P---SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 253 ------------~~--~----~---~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.. . . ........+..++++|.+||+.||++||+++|++.|
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~ 280 (283)
T cd07830 220 KQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQH 280 (283)
T ss_pred hhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhC
Confidence 00 0 0 000011124689999999999999999999999987
No 370
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.97 E-value=6.2e-30 Score=276.65 Aligned_cols=294 Identities=20% Similarity=0.323 Sum_probs=234.4
Q ss_pred CCCCcccCccEeeecc---ccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEec
Q 000410 1121 PDSGWRPRGILVAHLQ---EHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLR 1197 (1553)
Q Consensus 1121 ~~~~W~p~G~lv~~l~---~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~ 1197 (1553)
-+..|+..--++..+. +....|+|+.+ |...++||+.|+||||||..+.+ +...+.+|++.|.|+.|+
T Consensus 176 idsNWr~Gr~~~~rinc~Se~skgVYClQY--DD~kiVSGlrDnTikiWD~n~~~------c~~~L~GHtGSVLCLqyd- 246 (499)
T KOG0281|consen 176 IESNWRCGRHLLQRINCRSENSKGVYCLQY--DDEKIVSGLRDNTIKIWDKNSLE------CLKILTGHTGSVLCLQYD- 246 (499)
T ss_pred hhcchhccceeeeeecCCcccCCceEEEEe--cchhhhcccccCceEEeccccHH------HHHhhhcCCCcEEeeecc-
Confidence 3568986555566654 56789999998 56789999999999999998765 555778999999999995
Q ss_pred CCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCC
Q 000410 1198 HSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRS 1277 (1553)
Q Consensus 1198 ~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt 1277 (1553)
.+.+++||.|.+|+|||+++. .......+|-+.|..+.|+.+ ++++++.|.+|.+||+..
T Consensus 247 -~rviisGSSDsTvrvWDv~tg--------------e~l~tlihHceaVLhlrf~ng-----~mvtcSkDrsiaVWdm~s 306 (499)
T KOG0281|consen 247 -ERVIVSGSSDSTVRVWDVNTG--------------EPLNTLIHHCEAVLHLRFSNG-----YMVTCSKDRSIAVWDMAS 306 (499)
T ss_pred -ceEEEecCCCceEEEEeccCC--------------chhhHHhhhcceeEEEEEeCC-----EEEEecCCceeEEEeccC
Confidence 459999999999999999851 122334467778888889876 999999999999999988
Q ss_pred Cccc---ceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCC
Q 000410 1278 NSNT---WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTA 1354 (1553)
Q Consensus 1278 ~~~~---~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~ 1354 (1553)
...+ ..+.+ |...|+.+.|+. +++++++.|.+|++||+.+...++.+.. |...|.++.+ +
T Consensus 307 ps~it~rrVLvG--HrAaVNvVdfd~--kyIVsASgDRTikvW~~st~efvRtl~g-HkRGIAClQY------------r 369 (499)
T KOG0281|consen 307 PTDITLRRVLVG--HRAAVNVVDFDD--KYIVSASGDRTIKVWSTSTCEFVRTLNG-HKRGIACLQY------------R 369 (499)
T ss_pred chHHHHHHHHhh--hhhheeeecccc--ceEEEecCCceEEEEeccceeeehhhhc-ccccceehhc------------c
Confidence 7633 44555 899999999975 4999999999999999999999998876 6778888776 5
Q ss_pred CCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccC
Q 000410 1355 RPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLG 1434 (1553)
Q Consensus 1355 ~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 1434 (1553)
++++++|+.|++|++||++.|.|++++.++.. -
T Consensus 370 ~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEe-----------------------------------------------L 402 (499)
T KOG0281|consen 370 DRLVVSGSSDNTIRLWDIECGACLRVLEGHEE-----------------------------------------------L 402 (499)
T ss_pred CeEEEecCCCceEEEEeccccHHHHHHhchHH-----------------------------------------------h
Confidence 78999999999999999999999888864432 5
Q ss_pred cEEeccCCCCeEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhh
Q 000410 1435 IRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAA 1514 (1553)
Q Consensus 1435 V~sl~~sp~g~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 1514 (1553)
|+|+.| .+.+|++|+.||+|++||+..+...+..++.- + -
T Consensus 403 vRciRF-d~krIVSGaYDGkikvWdl~aaldpra~~~~~--------C-------------------------l------ 442 (499)
T KOG0281|consen 403 VRCIRF-DNKRIVSGAYDGKIKVWDLQAALDPRAPASTL--------C-------------------------L------ 442 (499)
T ss_pred hhheee-cCceeeeccccceEEEEecccccCCcccccch--------H-------------------------H------
Confidence 899998 45689999999999999998765543222100 0 0
Q ss_pred hhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1515 AATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1515 ~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
..+..|.+.|-.+ . .+..-|+|++.|.+|-||+
T Consensus 443 ---~~lv~hsgRVFrL-Q--FD~fqIvsssHddtILiWd 475 (499)
T KOG0281|consen 443 ---RTLVEHSGRVFRL-Q--FDEFQIISSSHDDTILIWD 475 (499)
T ss_pred ---HhhhhccceeEEE-e--ecceEEEeccCCCeEEEEE
Confidence 0011288888877 3 4666799999999999996
No 371
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.97 E-value=4.3e-29 Score=293.38 Aligned_cols=243 Identities=19% Similarity=0.217 Sum_probs=193.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
.|...+.||+|++|.||++.+.. ..+++|++.... ....+.+.+|+.+++.++||||+++++++...+..|++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v 94 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK-----QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVV 94 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc-----hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEE
Confidence 56667899999999999998753 669999875431 22334567788899999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
+||+. ++|.+++.. ..+++.++..++.|++.||+|||++||+||||||+||+++.++.++|+|||.+...... .+
T Consensus 95 ~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~--~~- 170 (285)
T cd06648 95 MEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKE--VP- 170 (285)
T ss_pred EeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccC--Cc-
Confidence 99998 599999887 55899999999999999999999999999999999999999999999999987643211 11
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~~~ 258 (1553)
......|++.|+|||.+. +..++.++||||+||++|+|++|.+||...+... .... ..+..
T Consensus 171 ----~~~~~~~~~~y~aPE~~~----------~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~-~~~~~ 235 (285)
T cd06648 171 ----RRKSLVGTPYWMAPEVIS----------RLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDN-LPPKL 235 (285)
T ss_pred ----ccccccCCccccCHHHhc----------CCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhc-CCCCC
Confidence 112234678899999764 3357889999999999999999988886543222 1222 11111
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
......+..+.++|.+||+.||++||++.++++|
T Consensus 236 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 269 (285)
T cd06648 236 KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNH 269 (285)
T ss_pred cccccCCHHHHHHHHHHcccChhhCcCHHHHccC
Confidence 1122245789999999999999999999999987
No 372
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.97 E-value=2.8e-29 Score=292.24 Aligned_cols=249 Identities=16% Similarity=0.214 Sum_probs=194.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC---ceEEEEEEeccCCC-----cCHHHHHHHHHHHHHHHh-cCCCCCeeEEEEEEEe
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE---GLVLVKVYFKRGDY-----IDLREYERRLFHIRETFR-SIDHPHVWAFQFWQET 96 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~---~~vavKv~~~~~~~-----~~~~~~~~~l~~e~~~l~-~l~hpnIv~~~~~~~~ 96 (1553)
+|++.+.||+|+||.||++.+.. ..+|+|.+...... ........++..|..++. .++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999865 56999988643111 122233344556666665 4799999999999999
Q ss_pred CCEEEEEecccc-CCHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCc
Q 000410 97 DKAAYLLRQYFF-NSLRDRLS----TPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFAS 170 (1553)
Q Consensus 97 ~~~~~lV~E~~~-gsL~d~l~----~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~ 170 (1553)
++..|++|||++ ++|.+++. ....+++..++.++.|++.||.|||+ .|++||||||+||++++++.++|+|||.
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~ 160 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL 160 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence 999999999999 48988773 33458999999999999999999996 7899999999999999999999999999
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHH
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYR 250 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~ 250 (1553)
+....... ......++..|+|||.+. ...++.++|+|||||++|+|++|.+||.........
T Consensus 161 ~~~~~~~~--------~~~~~~~~~~~~~Pe~~~----------~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~ 222 (269)
T cd08528 161 AKQKQPES--------KLTSVVGTILYSCPEIVK----------NEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLA 222 (269)
T ss_pred eeeccccc--------ccccccCcccCcChhhhc----------CCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHH
Confidence 87542211 122344678899999764 345788999999999999999999999765443322
Q ss_pred ----hcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 251 ----RGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 251 ----~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
...+.+ ......++.+.++|.+||+.||++||++.|+..+++
T Consensus 223 ~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 223 TKIVEAVYEP--LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred HHHhhccCCc--CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 222221 122245678999999999999999999999988753
No 373
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-29 Score=320.49 Aligned_cols=244 Identities=17% Similarity=0.225 Sum_probs=200.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--c-----eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--G-----LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~-----~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
..++.+.||+|.||.||.|...+ + .||+|.+.+. ...+...+|.+|..+|+.++||||+++++++.+..
T Consensus 693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~----~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~ 768 (1025)
T KOG1095|consen 693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL----SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG 768 (1025)
T ss_pred heEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc----CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence 68899999999999999998754 3 2888887554 33556677889999999999999999999999999
Q ss_pred EEEEEecccc-CCHHHHhcCC-------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCc
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP-------PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFAS 170 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~-------~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~ 170 (1553)
..+|++|||+ |+|..+|++. ..|+..+...++.||++|.+||+++++|||||-..|+|++....|||+|||+
T Consensus 769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccch
Confidence 9999999999 6999999765 2489999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCCcceeeecCC--CCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHH
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGG--KRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLL 247 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~--gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~ 247 (1553)
|+.++..+ ++..... -...|||||.|. .+.++.|+|||||||+|||+|+ |..||....-.
T Consensus 849 ArDiy~~~-------yyr~~~~a~lPvkWm~PEsl~----------d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~ 911 (1025)
T KOG1095|consen 849 ARDIYDKD-------YYRKHGEAMLPVKWMPPESLK----------DGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF 911 (1025)
T ss_pred hHhhhhch-------heeccCccccceecCCHHHHh----------hcccccccchhhhHHHHHHHHhCCCCCCCCcchH
Confidence 99554221 1211111 134699999875 4689999999999999999998 59999654332
Q ss_pred H----HHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 248 A----YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 248 ~----~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+ +..+. .-..+...++.+.+++..||+.+|++||++..++++.
T Consensus 912 ~v~~~~~~gg---RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~ 958 (1025)
T KOG1095|consen 912 EVLLDVLEGG---RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQD 958 (1025)
T ss_pred HHHHHHHhCC---ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhh
Confidence 2 33333 2223444556788999999999999999999999864
No 374
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.96 E-value=2e-29 Score=295.27 Aligned_cols=246 Identities=23% Similarity=0.313 Sum_probs=195.1
Q ss_pred eEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|++.+.||+|+||.||+|++.. ..+++|++.... ......+.+..|+.+++.++||||+++++++.+....|+||
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~---~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~ 77 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDN---EEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVF 77 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEecccc---ccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEe
Confidence 5677899999999999999864 679999997652 11233445667788999999999999999999999999999
Q ss_pred ccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCC
Q 000410 105 QYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSD 183 (1553)
Q Consensus 105 E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~ 183 (1553)
||++++|.+++... ..+++.++..++.|++.||+|||++||+||||+|+||+++.++.++|+|||.++.......
T Consensus 78 e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~---- 153 (282)
T cd07829 78 EYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR---- 153 (282)
T ss_pred cCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc----
Confidence 99999999999876 4699999999999999999999999999999999999999999999999998875532211
Q ss_pred cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH----Hh--------
Q 000410 184 FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY----RR-------- 251 (1553)
Q Consensus 184 ~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~----~~-------- 251 (1553)
......++..|+|||.+.. ...++.++|+|||||++|||++|.+||........ ..
T Consensus 154 ---~~~~~~~~~~~~aPE~~~~---------~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (282)
T cd07829 154 ---TYTHEVVTLWYRAPEILLG---------SKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEE 221 (282)
T ss_pred ---ccCccccCcCcCChHHhcC---------CcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHH
Confidence 1122234677999997642 23578899999999999999999999975432211 00
Q ss_pred ------------cCCCC-----C-CCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 ------------GQYDP-----S-QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ------------~~~~~-----~-~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
..+.. . ..++.. +..+.++|.+||..||++||+++++++|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~l~~~P~~Rp~~~~~l~~ 279 (282)
T cd07829 222 SWPGVTKLPDYKPTFPKFPPKDLEKVLPRL-DPEGIDLLSKMLQYNPAKRISAKEALKH 279 (282)
T ss_pred HHHhhcccccccccccccCccchHHhcccc-cHHHHHHHHHhhccCcccCCCHHHHhhC
Confidence 00000 0 011122 5689999999999999999999999988
No 375
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.96 E-value=4.6e-29 Score=324.11 Aligned_cols=145 Identities=20% Similarity=0.274 Sum_probs=130.8
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|++.+.||.|+||+||+|.+. ++.||||++.+... ........+..|+.+++.++||||+++++++......|||
T Consensus 5 ~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~--~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 5 EFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADM--INKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhc--cCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 7999999999999999999997 46799999965421 2234456788888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccc
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFK 172 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~ 172 (1553)
|||+. ++|.+++...+.+++..++.|+.||+.||+|||.+||+||||||+||||+.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99997 6999999877789999999999999999999999999999999999999999999999999876
No 376
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=3.2e-29 Score=275.18 Aligned_cols=289 Identities=17% Similarity=0.278 Sum_probs=222.6
Q ss_pred ccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCc
Q 000410 1178 RSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCA 1257 (1553)
Q Consensus 1178 ~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s 1257 (1553)
++...+.+|++.|.|+.|+|+|..+|+|+.|-++++||+++.. ....-..|...|.|++|+|+
T Consensus 106 rCssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeT--------------p~~t~KgH~~WVlcvawsPD--- 168 (480)
T KOG0271|consen 106 RCSSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTET--------------PLFTCKGHKNWVLCVAWSPD--- 168 (480)
T ss_pred eeccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCC--------------cceeecCCccEEEEEEECCC---
Confidence 4556778999999999999999999999999999999998522 12223468889999999999
Q ss_pred ceEEEEEeCCceEEEEeCCCCccc-ceeccCCCCcceEEEEEcC-----CCCEEEEEeCCCcEEEEeCCCCcccceeecc
Q 000410 1258 SHMFMYSTQNCGIHLWDTRSNSNT-WTLKAIPEEGYVSSLVTGP-----CGNWFVSGSSRGVLTLWDLRFLVPVNSWQYS 1331 (1553)
Q Consensus 1258 ~~~l~~~s~dg~I~iwDlrt~~~~-~~l~~~~h~g~Itsl~~sp-----~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~ 1331 (1553)
+..|++|+.||.|++||..+|+++ ..|.+ |...|++++|.| ..+.|++++.||.++|||+.-+.++..+..
T Consensus 169 gk~iASG~~dg~I~lwdpktg~~~g~~l~g--H~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsg- 245 (480)
T KOG0271|consen 169 GKKIASGSKDGSIRLWDPKTGQQIGRALRG--HKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSG- 245 (480)
T ss_pred cchhhccccCCeEEEecCCCCCcccccccC--cccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEecc-
Confidence 789999999999999999999875 46655 999999999976 457999999999999999999989888775
Q ss_pred ccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCccccc--------CCC
Q 000410 1332 QVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFA--------RPS 1403 (1553)
Q Consensus 1332 ~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~--------~p~ 1403 (1553)
|..+|++++| .. ..++++|+.|++|++|+...|.|.+.+.++.. .++.+..+-+ .|.
T Consensus 246 HT~~VTCvrw-GG----------~gliySgS~DrtIkvw~a~dG~~~r~lkGHah----wvN~lalsTdy~LRtgaf~~t 310 (480)
T KOG0271|consen 246 HTASVTCVRW-GG----------EGLIYSGSQDRTIKVWRALDGKLCRELKGHAH----WVNHLALSTDYVLRTGAFDHT 310 (480)
T ss_pred CccceEEEEE-cC----------CceEEecCCCceEEEEEccchhHHHhhcccch----heeeeeccchhhhhccccccc
Confidence 7779999999 22 24899999999999999999999988886543 2222211100 000
Q ss_pred CCC-CCC----------------cccccc--ccccccc---------cccCCCCCCccCcEEeccCCCC-eEEEccCCCe
Q 000410 1404 SRS-NPK----------------TDLRRN--VNQKYRV---------DELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLK 1454 (1553)
Q Consensus 1404 ~~~-~~~----------------~~~~~~--~~~~~~~---------~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~ 1454 (1553)
... .+. ....+. ..+++.+ ..+...++|..-|+.+.|+||+ .+++++-|..
T Consensus 311 ~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r~IASaSFDkS 390 (480)
T KOG0271|consen 311 GRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGRYIASASFDKS 390 (480)
T ss_pred cccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCccEEEEeecccc
Confidence 000 000 000000 0122221 1223457888899999999999 5669999999
Q ss_pred EEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeee
Q 000410 1455 IRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVK 1534 (1553)
Q Consensus 1455 IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~ 1534 (1553)
||+||-.+++... .+++|.+.|..| +|+
T Consensus 391 VkLW~g~tGk~la---------------------------------------------------sfRGHv~~VYqv-aws 418 (480)
T KOG0271|consen 391 VKLWDGRTGKFLA---------------------------------------------------SFRGHVAAVYQV-AWS 418 (480)
T ss_pred eeeeeCCCcchhh---------------------------------------------------hhhhccceeEEE-Eec
Confidence 9999988765432 234599999999 699
Q ss_pred cCCcEEEEEcCCceEEEcC
Q 000410 1535 LNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1535 ~~~~~LvSas~DG~IkVWk 1553 (1553)
.+.++|||||.|.++|||+
T Consensus 419 aDsRLlVS~SkDsTLKvw~ 437 (480)
T KOG0271|consen 419 ADSRLLVSGSKDSTLKVWD 437 (480)
T ss_pred cCccEEEEcCCCceEEEEE
Confidence 9999999999999999995
No 377
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=5.8e-30 Score=303.97 Aligned_cols=236 Identities=23% Similarity=0.295 Sum_probs=189.6
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHh-cCCCCCeeEEEEEEEeCCEEE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFR-SIDHPHVWAFQFWQETDKAAY 101 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~-~l~hpnIv~~~~~~~~~~~~~ 101 (1553)
-+|.+...+|.|+|+.|-.|.+.. ...++|++.+.... ..+|..++. .-+||||+++++++.++...|
T Consensus 322 ~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~~---------~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~ 392 (612)
T KOG0603|consen 322 ESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRADD---------NQDEIPISLLVRDHPNIVKSHDVYEDGKEIY 392 (612)
T ss_pred hhhccccccCCCCccceeeeeccccccchhheeccccccc---------cccccchhhhhcCCCcceeecceecCCceee
Confidence 378888899999999999998854 56999999776211 122223333 347999999999999999999
Q ss_pred EEeccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEE-ecCCcEEEeecCccccccCCCC
Q 000410 102 LLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLV-TSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 102 lV~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv-~~~~~vkL~DFG~a~~~~~~~~ 179 (1553)
+|||++.| -|.+++...+... .++..|+.||+.|+.|||++||+||||||+|||+ ++.|+++|+|||.++.....
T Consensus 393 ~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~-- 469 (612)
T KOG0603|consen 393 LVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS-- 469 (612)
T ss_pred eeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh--
Confidence 99999995 7777777666555 8888899999999999999999999999999999 58899999999999865211
Q ss_pred CCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHH-HHHHhcCCCCCC
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL-LAYRRGQYDPSQ 258 (1553)
Q Consensus 180 ~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~-~~~~~~~~~~~~ 258 (1553)
..+.+-|..|.|||++. ...|++++||||||++||+|++|..||....- ..+......+.
T Consensus 470 --------~~tp~~t~~y~APEvl~----------~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~- 530 (612)
T KOG0603|consen 470 --------CDTPALTLQYVAPEVLA----------IQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPK- 530 (612)
T ss_pred --------hcccchhhcccChhhhc----------cCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCc-
Confidence 34445577899999664 55799999999999999999999999964322 23333222222
Q ss_pred CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+....+..+++||.+||+.||.+|+++.+++.|
T Consensus 531 -~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 531 -FSECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred -cccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 225667899999999999999999999999998
No 378
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.96 E-value=2e-29 Score=295.41 Aligned_cols=247 Identities=21% Similarity=0.271 Sum_probs=194.3
Q ss_pred eEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|++.+.||.|++|.||+|.+. +..+++|.+..... .......+.+|..+++.++||||+++++++..+...|+|+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~ 77 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFE---SEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVF 77 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccc---cchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEE
Confidence 466789999999999999985 35699998865421 1234456777888999999999999999999999999999
Q ss_pred ccccCCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCC
Q 000410 105 QYFFNSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSD 183 (1553)
Q Consensus 105 E~~~gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~ 183 (1553)
||++++|.+++..+ ..+++.++..++.||+.||.|||++||+||||||+||+++.++.++|+|||.+.....+.
T Consensus 78 e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~----- 152 (283)
T cd05118 78 EFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV----- 152 (283)
T ss_pred eccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-----
Confidence 99999999988764 468999999999999999999999999999999999999999999999999887553221
Q ss_pred cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH----HHhcCCCC---
Q 000410 184 FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDP--- 256 (1553)
Q Consensus 184 ~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~----~~~~~~~~--- 256 (1553)
.......++..|+|||.+.+ ...++.++|+||+||++|+|++|++||...+... .......+
T Consensus 153 --~~~~~~~~~~~~~~PE~~~~---------~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (283)
T cd05118 153 --RPYTHYVVTRWYRAPELLLG---------DKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPE 221 (283)
T ss_pred --ccccCccCcccccCcHHHhc---------CCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchH
Confidence 01112335677999997642 2357889999999999999999999996433211 11000000
Q ss_pred -----------------------CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 257 -----------------------SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 257 -----------------------~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
........+..++++|.+||+.||.+||++++++.|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~ 280 (283)
T cd05118 222 VWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAH 280 (283)
T ss_pred hcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 000111235789999999999999999999999988
No 379
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.96 E-value=4.6e-29 Score=294.12 Aligned_cols=243 Identities=19% Similarity=0.204 Sum_probs=190.9
Q ss_pred eEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|.....||+|+||.||++... +..||+|++... .......+.+|..+++.++||||+++++.+..++..|++|
T Consensus 22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~-----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 96 (292)
T cd06657 22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLR-----KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM 96 (292)
T ss_pred hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEeccc-----chhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEE
Confidence 333468999999999999885 366999987432 1233456778888999999999999999999999999999
Q ss_pred cccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCC
Q 000410 105 QYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSD 183 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~ 183 (1553)
||++ ++|.+++... .+++..+..++.|++.||+|||++|++||||||+||+++.++.++|+|||++........ .
T Consensus 97 e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~---~ 172 (292)
T cd06657 97 EFLEGGALTDIVTHT-RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP---R 172 (292)
T ss_pred ecCCCCcHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccc---c
Confidence 9999 4888877554 589999999999999999999999999999999999999999999999998764422110 0
Q ss_pred cceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHH---HhcCCCCCCCC
Q 000410 184 FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAY---RRGQYDPSQHL 260 (1553)
Q Consensus 184 ~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~---~~~~~~~~~~~ 260 (1553)
.....+++.|+|||.+. ...++.++|+||+||++|+|++|.+||........ ...........
T Consensus 173 ----~~~~~~~~~y~~pE~~~----------~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~ 238 (292)
T cd06657 173 ----RKSLVGTPYWMAPELIS----------RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKN 238 (292)
T ss_pred ----ccccccCccccCHHHhc----------CCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCC
Confidence 11234678899999763 23567899999999999999999999865433221 11112111111
Q ss_pred CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 261 EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 261 ~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
....+..+.+++.+||+.||.+||+++++++|
T Consensus 239 ~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 239 LHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred cccCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 22345789999999999999999999999997
No 380
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=99.96 E-value=9.2e-28 Score=255.41 Aligned_cols=303 Identities=20% Similarity=0.264 Sum_probs=238.1
Q ss_pred cEeeeccccccCeeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCC
Q 000410 1130 ILVAHLQEHCSAVNEIAISHDH-SFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD 1208 (1553)
Q Consensus 1130 ~lv~~l~~H~~~V~~l~~spd~-~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~D 1208 (1553)
.+..++.+|.+.|+.++..+.+ ..++++|.|.++-+|++.+.+.. .-.....+.+|+..|..+..+++|+..+++|.|
T Consensus 6 ~l~~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~-~G~~~r~~~GHsH~v~dv~~s~dg~~alS~swD 84 (315)
T KOG0279|consen 6 VLRGTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIK-YGVPVRRLTGHSHFVSDVVLSSDGNFALSASWD 84 (315)
T ss_pred eeeeeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCccc-cCceeeeeeccceEecceEEccCCceEEecccc
Confidence 4568999999999999998874 69999999999999999875321 223556788999999999999999999999999
Q ss_pred CcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCC
Q 000410 1209 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIP 1288 (1553)
Q Consensus 1209 G~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~ 1288 (1553)
|++++||+.+. .......+|...|.+++|+++ ...+++|+.|.+|.+|+.. +.+..++....
T Consensus 85 ~~lrlWDl~~g--------------~~t~~f~GH~~dVlsva~s~d---n~qivSGSrDkTiklwnt~-g~ck~t~~~~~ 146 (315)
T KOG0279|consen 85 GTLRLWDLATG--------------ESTRRFVGHTKDVLSVAFSTD---NRQIVSGSRDKTIKLWNTL-GVCKYTIHEDS 146 (315)
T ss_pred ceEEEEEecCC--------------cEEEEEEecCCceEEEEecCC---CceeecCCCcceeeeeeec-ccEEEEEecCC
Confidence 99999999741 223345578888999999999 6799999999999999997 45666666555
Q ss_pred CCcceEEEEEcCC--CCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCe
Q 000410 1289 EEGYVSSLVTGPC--GNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1366 (1553)
Q Consensus 1289 h~g~Itsl~~sp~--g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~ 1366 (1553)
+.+.|+|++|+|+ ..++++++.|++|++||++..+....+.. |..-++.+.+ +++|..+++|+.||+
T Consensus 147 ~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~g-h~~~v~t~~v----------SpDGslcasGgkdg~ 215 (315)
T KOG0279|consen 147 HREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIG-HSGYVNTVTV----------SPDGSLCASGGKDGE 215 (315)
T ss_pred CcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhcccc-ccccEEEEEE----------CCCCCEEecCCCCce
Confidence 6889999999997 67899999999999999998877666554 5555666655 445668899999999
Q ss_pred EEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCCeE
Q 000410 1367 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDL 1446 (1553)
Q Consensus 1367 V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~l 1446 (1553)
+.+||+..+++.+.+.. ...|++++|+|+...
T Consensus 216 ~~LwdL~~~k~lysl~a------------------------------------------------~~~v~sl~fspnryw 247 (315)
T KOG0279|consen 216 AMLWDLNEGKNLYSLEA------------------------------------------------FDIVNSLCFSPNRYW 247 (315)
T ss_pred EEEEEccCCceeEeccC------------------------------------------------CCeEeeEEecCCcee
Confidence 99999999998777641 126999999999988
Q ss_pred EEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccc
Q 000410 1447 LTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDS 1526 (1553)
Q Consensus 1447 lTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~ 1526 (1553)
+.++.+-.|++||+.+......+. .+..++ ..+.-.-.
T Consensus 248 L~~at~~sIkIwdl~~~~~v~~l~---~d~~g~---------------------------------------s~~~~~~~ 285 (315)
T KOG0279|consen 248 LCAATATSIKIWDLESKAVVEELK---LDGIGP---------------------------------------SSKAGDPI 285 (315)
T ss_pred EeeccCCceEEEeccchhhhhhcc---cccccc---------------------------------------ccccCCcE
Confidence 888888889999998654433222 111000 00001112
Q ss_pred eeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1527 ILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1527 I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
-+++ +|+.+|.-|.+|-.||.|+||.
T Consensus 286 clsl-aws~dG~tLf~g~td~~irv~q 311 (315)
T KOG0279|consen 286 CLSL-AWSADGQTLFAGYTDNVIRVWQ 311 (315)
T ss_pred EEEE-EEcCCCcEEEeeecCCcEEEEE
Confidence 3455 6899999999999999999994
No 381
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-30 Score=289.27 Aligned_cols=261 Identities=17% Similarity=0.177 Sum_probs=207.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEecc--CCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEe-CCEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKR--GDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET-DKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~--~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~-~~~~ 100 (1553)
+|-++..||+|+|+.||+|.+-. +.||||+-... ......+.|.+...+|.+|-+.|+||.||++|++|.- .+.+
T Consensus 464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 67788899999999999998853 67999986543 2223345567778889999999999999999999954 4568
Q ss_pred EEEeccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--CCeecCCCCCcEEEec---CCcEEEeecCccccc
Q 000410 101 YLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK--GICHGDIKCENVLVTS---WNWLYLSDFASFKPT 174 (1553)
Q Consensus 101 ~lV~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~--gIvHrDIKp~NILv~~---~~~vkL~DFG~a~~~ 174 (1553)
|-|+|||+| +|.-||+....+++.+++.|+.||+.||.||.+. .|+|-||||.|||+.+ .|.+||+|||+++..
T Consensus 544 CTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIM 623 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIM 623 (775)
T ss_pred eeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhc
Confidence 999999997 8888999998999999999999999999999986 5999999999999964 468999999999987
Q ss_pred cCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHH-HHHh--
Q 000410 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLL-AYRR-- 251 (1553)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~-~~~~-- 251 (1553)
.....+..+.......+.||.||++||.|.-.. ....++.++||||+|+|+|.++.|+.||...+.. ++.+
T Consensus 624 dddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgk------ePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeN 697 (775)
T KOG1151|consen 624 DDDSYNSVDGMELTSQGAGTYWYLPPECFVVGK------EPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQEN 697 (775)
T ss_pred cCCccCcccceeeecccCceeeecCcceeecCC------CCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhh
Confidence 655555555555566778999999999986221 1346789999999999999999999999643321 1111
Q ss_pred cCCC-CCCCC--CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 252 GQYD-PSQHL--EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 252 ~~~~-~~~~~--~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.... ....+ ....+.+.+++|++||++.-++|....++..+
T Consensus 698 TIlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~d 741 (775)
T KOG1151|consen 698 TILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACD 741 (775)
T ss_pred chhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHccC
Confidence 1111 11112 23456789999999999999999999988876
No 382
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.96 E-value=1.8e-29 Score=291.89 Aligned_cols=255 Identities=17% Similarity=0.180 Sum_probs=203.1
Q ss_pred cCCCccceEEEEEeeccCcEEEEEEEECC-ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC
Q 000410 20 DLPSSYNLVLKEVLGGSRFFKSILCKHDE-GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK 98 (1553)
Q Consensus 20 ~l~~~~~y~~~~~LG~G~fg~V~~a~~~~-~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~ 98 (1553)
++|.+ ...++++||+|-||.|.+|...+ ..||||.+... ........|.+|+++|.+|+||||++++++|..++
T Consensus 534 EfPRs-~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~----a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De 608 (807)
T KOG1094|consen 534 EFPRS-RLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPD----ATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD 608 (807)
T ss_pred hcchh-heehhhhhcCcccceeEEEEecCceEEEEeecCcc----cchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC
Confidence 34443 57889999999999999999988 66999998543 33445678999999999999999999999999999
Q ss_pred EEEEEecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccccc
Q 000410 99 AAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTY 175 (1553)
Q Consensus 99 ~~~lV~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~ 175 (1553)
.+++|+||++ |+|.+++... +.+.......|+.||+.|++||.+.++|||||.+.|+|++.++++||+|||+++..+
T Consensus 609 PicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~ly 688 (807)
T KOG1094|consen 609 PLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLY 688 (807)
T ss_pred chHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccc
Confidence 9999999999 8999999876 444566677899999999999999999999999999999999999999999998665
Q ss_pred CCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC--CCCCCchHHHHHHh--
Q 000410 176 IPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE--VPFFELSHLLAYRR-- 251 (1553)
Q Consensus 176 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg--~~pf~~~~~~~~~~-- 251 (1553)
... +...-+...-...|||||.+. .++++.++|+|++|+++||+++- ..||..-.-.+..+
T Consensus 689 sg~-----yy~vqgr~vlpiRwmawEsil----------lgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~ 753 (807)
T KOG1094|consen 689 SGD-----YYRVQGRAVLPIRWMAWESIL----------LGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENA 753 (807)
T ss_pred cCC-----ceeeecceeeeeeehhHHHHH----------hccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhh
Confidence 332 111111222246799999775 45789999999999999999764 77885333222221
Q ss_pred -cCCC-----CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 252 -GQYD-----PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 252 -~~~~-----~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
..++ .-...+...+..+.+++.+||..|-++||+++++-.++.
T Consensus 754 ~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq 802 (807)
T KOG1094|consen 754 GEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQ 802 (807)
T ss_pred hhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHH
Confidence 1111 112245566778999999999999999999999988764
No 383
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.96 E-value=1.3e-27 Score=262.57 Aligned_cols=334 Identities=15% Similarity=0.225 Sum_probs=262.4
Q ss_pred EeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCc
Q 000410 1131 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1210 (1553)
Q Consensus 1131 lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~ 1210 (1553)
-+.+|.+|++.|.+++.+|+..+.|||+.|....||++.+++ -.....+|...|+|+.|+.+|.+||+|+-+|.
T Consensus 56 S~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge------~~~eltgHKDSVt~~~FshdgtlLATGdmsG~ 129 (399)
T KOG0296|consen 56 SLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGE------FAGELTGHKDSVTCCSFSHDGTLLATGDMSGK 129 (399)
T ss_pred ceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCc------ceeEecCCCCceEEEEEccCceEEEecCCCcc
Confidence 367899999999999999999999999999999999999987 34567789999999999999999999999999
Q ss_pred EEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCC
Q 000410 1211 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEE 1290 (1553)
Q Consensus 1211 I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~ 1290 (1553)
|+||++.+.. ...... .+..-+..+.|||. +..|++|+.||.+.+|.+..+...+.+.+ |.
T Consensus 130 v~v~~~stg~-------------~~~~~~-~e~~dieWl~WHp~---a~illAG~~DGsvWmw~ip~~~~~kv~~G--h~ 190 (399)
T KOG0296|consen 130 VLVFKVSTGG-------------EQWKLD-QEVEDIEWLKWHPR---AHILLAGSTDGSVWMWQIPSQALCKVMSG--HN 190 (399)
T ss_pred EEEEEcccCc-------------eEEEee-cccCceEEEEeccc---ccEEEeecCCCcEEEEECCCcceeeEecC--CC
Confidence 9999997411 111111 34556677899998 67999999999999999998877777766 89
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEE
Q 000410 1291 GYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLW 1370 (1553)
Q Consensus 1291 g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vW 1370 (1553)
.++++-.|.|+|+.+++|..||+|++||+.++.++.........+.+++.+ +..+..++.|+.++.+.+-
T Consensus 191 ~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~----------~~~~~~~~~g~~e~~~~~~ 260 (399)
T KOG0296|consen 191 SPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISL----------NLAGSTLTKGNSEGVACGV 260 (399)
T ss_pred CCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCcccc----------ccccceeEeccCCccEEEE
Confidence 999999999999999999999999999999998887776544333333333 3345678888888999999
Q ss_pred EcCCCcEEEEEecccC-------CCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCC
Q 000410 1371 NAENGSCHQVLRTANY-------DGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG 1443 (1553)
Q Consensus 1371 Dl~tg~~~~~l~~~~~-------~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~ 1443 (1553)
+..+|+.+.+...... ...-+++.++++-.-|+.+......+. ...+++...+.....|..+|..+.|.++
T Consensus 261 ~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i--~iyD~a~~~~R~~c~he~~V~~l~w~~t 338 (399)
T KOG0296|consen 261 NNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTI--AIYDLAASTLRHICEHEDGVTKLKWLNT 338 (399)
T ss_pred ccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceE--EEEecccchhheeccCCCceEEEEEcCc
Confidence 9888888777763111 112234445555444555443322111 1233333444555677788999999997
Q ss_pred CeEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCC
Q 000410 1444 GDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCH 1523 (1553)
Q Consensus 1444 g~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H 1523 (1553)
..|+|+..||+||.||.+++...+.+.| |
T Consensus 339 ~~l~t~c~~g~v~~wDaRtG~l~~~y~G---------------------------------------------------H 367 (399)
T KOG0296|consen 339 DYLLTACANGKVRQWDARTGQLKFTYTG---------------------------------------------------H 367 (399)
T ss_pred chheeeccCceEEeeeccccceEEEEec---------------------------------------------------C
Confidence 7999999999999999998876665544 9
Q ss_pred ccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1524 RDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1524 ~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
+..|.++ +..+++++++|+|.|++.+||+
T Consensus 368 ~~~Il~f-~ls~~~~~vvT~s~D~~a~VF~ 396 (399)
T KOG0296|consen 368 QMGILDF-ALSPQKRLVVTVSDDNTALVFE 396 (399)
T ss_pred chheeEE-EEcCCCcEEEEecCCCeEEEEe
Confidence 9999999 6899999999999999999985
No 384
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=2.4e-29 Score=291.64 Aligned_cols=254 Identities=18% Similarity=0.206 Sum_probs=196.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
-|+.++.||-|+||+|.+++..+ ..||+|.+.|.+- -.......++.|++||...+.+.||++|-.|++++.+|+|
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDV--l~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV 707 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADV--LMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV 707 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHH--HhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence 58889999999999999998755 5599999977632 2233445678899999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccc--------
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT-------- 174 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~-------- 174 (1553)
|+|++ |++-.+|-+-+.++|..+++++..|.+|+++.|..|+|||||||+|||||.+|++||+|||++.-.
T Consensus 708 MdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskY 787 (1034)
T KOG0608|consen 708 MDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKY 787 (1034)
T ss_pred EeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceecccccc
Confidence 99999 599999988899999999999999999999999999999999999999999999999999987532
Q ss_pred cCCCCCCC-----------Ccce----------------eeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHH
Q 000410 175 YIPYDDPS-----------DFSF----------------FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAV 227 (1553)
Q Consensus 175 ~~~~~~~~-----------~~~~----------------~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSl 227 (1553)
+...+... +.+. ......||+.|+|||++. ...|+..+|.||.
T Consensus 788 Yq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~----------r~g~~q~cdwws~ 857 (1034)
T KOG0608|consen 788 YQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLA----------RTGYTQLCDWWSV 857 (1034)
T ss_pred ccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhc----------ccCccccchhhHh
Confidence 11111110 0000 011235899999999875 3457888999999
Q ss_pred HHHHHHHHcCCCCCCchHHHH--HHhcCCCC--CCCCCCCCCHHHHHHHHHhcccCcCCCC---CHHHHHHh
Q 000410 228 GCVIAELFLEVPFFELSHLLA--YRRGQYDP--SQHLEKIPDSGIRKMILHMIQLEPELRF---SAESYLQN 292 (1553)
Q Consensus 228 G~il~eLltg~~pf~~~~~~~--~~~~~~~~--~~~~~~~~~~~l~~LI~~mL~~dP~~Rp---sa~elL~~ 292 (1553)
|+|||||+.|++||....... ++-..+.. ........++++.+||.++.. +++.|. .++|+-.|
T Consensus 858 gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaH 928 (1034)
T KOG0608|consen 858 GVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAH 928 (1034)
T ss_pred hHHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcC
Confidence 999999999999996443221 12122221 112233456889999988764 678888 45667666
No 385
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=5.5e-29 Score=284.15 Aligned_cols=223 Identities=17% Similarity=0.184 Sum_probs=176.2
Q ss_pred cCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-CCHH
Q 000410 36 SRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF-NSLR 112 (1553)
Q Consensus 36 G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~-gsL~ 112 (1553)
|.|++||++++.. +.||+|++.+... ..++...+....||||+++++++......|+||||++ |+|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~----------~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSSE----------YSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchhh----------hhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHH
Confidence 8999999999854 5699999865421 1122233444569999999999999999999999999 5999
Q ss_pred HHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceeeecCC
Q 000410 113 DRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGG 192 (1553)
Q Consensus 113 d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~ 192 (1553)
+++...+.+++.++..++.|++.||+|||++||+||||||+||+++.++.++|+|||.+...... .....
T Consensus 74 ~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~----------~~~~~ 143 (237)
T cd05576 74 SHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS----------CDGEA 143 (237)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc----------cccCC
Confidence 99987777999999999999999999999999999999999999999999999999977543211 11223
Q ss_pred CCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCHHHHHHH
Q 000410 193 KRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSGIRKMI 272 (1553)
Q Consensus 193 gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~l~~LI 272 (1553)
++..|+|||.+. ...++.++|+||+||++|||++|.+||........ ......++...++.++++|
T Consensus 144 ~~~~y~aPE~~~----------~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~li 209 (237)
T cd05576 144 VENMYCAPEVGG----------ISEETEACDWWSLGAILFELLTGKTLVECHPSGIN----THTTLNIPEWVSEEARSLL 209 (237)
T ss_pred cCccccCCcccC----------CCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc----cccccCCcccCCHHHHHHH
Confidence 456799999653 34578899999999999999999888764321100 0111123445567899999
Q ss_pred HHhcccCcCCCCCH-----HHHHHh
Q 000410 273 LHMIQLEPELRFSA-----ESYLQN 292 (1553)
Q Consensus 273 ~~mL~~dP~~Rpsa-----~elL~~ 292 (1553)
.+||+.||++||++ +++++|
T Consensus 210 ~~~l~~dp~~R~~~~~~~~~~~~~h 234 (237)
T cd05576 210 QQLLQFNPTERLGAGVAGVEDIKSH 234 (237)
T ss_pred HHHccCCHHHhcCCCccchHHHHcC
Confidence 99999999999986 788877
No 386
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.96 E-value=6.5e-29 Score=275.49 Aligned_cols=282 Identities=15% Similarity=0.233 Sum_probs=236.2
Q ss_pred ccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEe
Q 000410 1137 EHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSV 1216 (1553)
Q Consensus 1137 ~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi 1216 (1553)
.-+.+|+.|.|.|+|+.|+|||..|.+.+|+..... .....+.|...|.++.|++++..+++|+.+|.|++|+.
T Consensus 94 Kvkc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fn------FEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqp 167 (464)
T KOG0284|consen 94 KVKCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFN------FETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQP 167 (464)
T ss_pred ccccceeeEEEcCCCceeEeecccccEEEecCceee------HHHHhhhhcccceeEEEccCCCEEEEcCCCceEEeccc
Confidence 345689999999999999999999999999985433 44566789999999999999999999999999999988
Q ss_pred eecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEE
Q 000410 1217 DHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSL 1296 (1553)
Q Consensus 1217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl 1296 (1553)
.. ..+......|...|.+++|+|+ ...+++|+.||+|++||.+..+....+.+ |...|+|+
T Consensus 168 nm--------------nnVk~~~ahh~eaIRdlafSpn---DskF~t~SdDg~ikiWdf~~~kee~vL~G--HgwdVksv 228 (464)
T KOG0284|consen 168 NM--------------NNVKIIQAHHAEAIRDLAFSPN---DSKFLTCSDDGTIKIWDFRMPKEERVLRG--HGWDVKSV 228 (464)
T ss_pred ch--------------hhhHHhhHhhhhhhheeccCCC---CceeEEecCCCeEEEEeccCCchhheecc--CCCCccee
Confidence 62 1223334456688999999997 45999999999999999999999888866 88889999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCc
Q 000410 1297 VTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGS 1376 (1553)
Q Consensus 1297 ~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~ 1376 (1553)
+|+|....+++|+.|..|++||.|++.++.++.. |...|..+.| .| ++++++++|.|..++++|+++.+
T Consensus 229 dWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~-HKntVl~~~f-~~---------n~N~Llt~skD~~~kv~DiR~mk 297 (464)
T KOG0284|consen 229 DWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHG-HKNTVLAVKF-NP---------NGNWLLTGSKDQSCKVFDIRTMK 297 (464)
T ss_pred ccCCccceeEEccCCceeEeecCCCcchhhhhhh-ccceEEEEEE-cC---------CCCeeEEccCCceEEEEehhHhH
Confidence 9999999999999999999999999999999876 6667888877 44 45799999999999999999776
Q ss_pred EEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC--eEEEccCCCe
Q 000410 1377 CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG--DLLTGGTDLK 1454 (1553)
Q Consensus 1377 ~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g--~llTgg~Dg~ 1454 (1553)
.+.+++. |...|+++.|+|-. .+.+||+||.
T Consensus 298 El~~~r~-----------------------------------------------Hkkdv~~~~WhP~~~~lftsgg~Dgs 330 (464)
T KOG0284|consen 298 ELFTYRG-----------------------------------------------HKKDVTSLTWHPLNESLFTSGGSDGS 330 (464)
T ss_pred HHHHhhc-----------------------------------------------chhhheeeccccccccceeeccCCCc
Confidence 5555543 33368999999944 6779999999
Q ss_pred EEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeee
Q 000410 1455 IRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVK 1534 (1553)
Q Consensus 1455 IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~ 1534 (1553)
|.+|.+...+. ......+|...|+++ .++
T Consensus 331 vvh~~v~~~~p--------------------------------------------------~~~i~~AHd~~iwsl-~~h 359 (464)
T KOG0284|consen 331 VVHWVVGLEEP--------------------------------------------------LGEIPPAHDGEIWSL-AYH 359 (464)
T ss_pred eEEEecccccc--------------------------------------------------ccCCCcccccceeee-ecc
Confidence 99999862111 011223499999999 799
Q ss_pred cCCcEEEEEcCCceEEEc
Q 000410 1535 LNQRLLISSSRDGAIKVW 1552 (1553)
Q Consensus 1535 ~~~~~LvSas~DG~IkVW 1552 (1553)
|-|.+|+|||.|.++++|
T Consensus 360 PlGhil~tgsnd~t~rfw 377 (464)
T KOG0284|consen 360 PLGHILATGSNDRTVRFW 377 (464)
T ss_pred ccceeEeecCCCcceeee
Confidence 999999999999999999
No 387
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.96 E-value=7.8e-30 Score=307.91 Aligned_cols=247 Identities=24% Similarity=0.283 Sum_probs=195.3
Q ss_pred EEEEEeeccCcE-EEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEEEec
Q 000410 28 VLKEVLGGSRFF-KSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYLLRQ 105 (1553)
Q Consensus 28 ~~~~~LG~G~fg-~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~lV~E 105 (1553)
.-.+.+|.|+-| .||+|...++.||||.+. .+......+|+..|+.- +||||++||+.-.++...||..|
T Consensus 512 ~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll--------~e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalE 583 (903)
T KOG1027|consen 512 SPKEILGYGSNGTVVFRGVYEGREVAVKRLL--------EEFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALE 583 (903)
T ss_pred ccHHHcccCCCCcEEEEEeeCCceehHHHHh--------hHhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEeh
Confidence 334578888887 589999999999999874 34555677888888776 59999999999999999999999
Q ss_pred cccCCHHHHhcCC--C--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec---CC--cEEEeecCccccccC
Q 000410 106 YFFNSLRDRLSTP--P--FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS---WN--WLYLSDFASFKPTYI 176 (1553)
Q Consensus 106 ~~~gsL~d~l~~~--~--~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~---~~--~vkL~DFG~a~~~~~ 176 (1553)
.|..+|.|++... . .....+.+.++.|++.||+|||+.+||||||||.||||+. ++ .++|+|||++|....
T Consensus 584 LC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~ 663 (903)
T KOG1027|consen 584 LCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAG 663 (903)
T ss_pred HhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCC
Confidence 9999999999773 1 1222566788999999999999999999999999999987 33 699999999997632
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC-CCCCCch--HHHHHHhcC
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELS--HLLAYRRGQ 253 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~pf~~~--~~~~~~~~~ 253 (1553)
++..+.. ..+..||-+|+|||++... .-+.++|||||||++|+.++| ..||... ....+..+.
T Consensus 664 ---~~sS~~r-~s~~sGt~GW~APE~L~~~----------~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~~~ 729 (903)
T KOG1027|consen 664 ---GKSSFSR-LSGGSGTSGWQAPEQLRED----------RKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILTGN 729 (903)
T ss_pred ---Ccchhhc-ccCCCCcccccCHHHHhcc----------ccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhcCc
Confidence 2233333 4566789999999988633 234589999999999999998 9999643 333455555
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhcccCCCCCCc
Q 000410 254 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAAVVFPTYFSP 304 (1553)
Q Consensus 254 ~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~~fP~~f~~ 304 (1553)
+.... +....+.+.++||.+||..||..||+|.++|.| |.|++
T Consensus 730 ~~L~~-L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~H-------PlFW~ 772 (903)
T KOG1027|consen 730 YTLVH-LEPLPDCEAKDLISRMLNPDPQLRPSATDVLNH-------PLFWD 772 (903)
T ss_pred cceee-eccCchHHHHHHHHHhcCCCcccCCCHHHHhCC-------CccCC
Confidence 54322 222333389999999999999999999999999 66665
No 388
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=99.96 E-value=3.2e-29 Score=277.97 Aligned_cols=276 Identities=20% Similarity=0.296 Sum_probs=221.7
Q ss_pred CCCCCcccccCCCCCCcccCc-cEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCC
Q 000410 1109 TGLPSFVRTSSIPDSGWRPRG-ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEG 1187 (1553)
Q Consensus 1109 ~g~~~~~~~~~~~~~~W~p~G-~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~ 1187 (1553)
+|......+.+....+|+-.+ ..-..+++|..+|.++.|++++.+++||+.||+||+|+..-.. ....+..|.
T Consensus 107 eGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnn------Vk~~~ahh~ 180 (464)
T KOG0284|consen 107 EGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNN------VKIIQAHHA 180 (464)
T ss_pred CCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhh------hHHhhHhhh
Confidence 444333333334467898542 3345678999999999999999999999999999999987533 222334455
Q ss_pred CceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCC
Q 000410 1188 SRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQN 1267 (1553)
Q Consensus 1188 ~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~d 1267 (1553)
..|.|++|+|+...|++||+||+|+|||..... -.....+|+.-|.++.|+|. ..++++++.|
T Consensus 181 eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~k--------------ee~vL~GHgwdVksvdWHP~---kgLiasgskD 243 (464)
T KOG0284|consen 181 EAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPK--------------EERVLRGHGWDVKSVDWHPT---KGLIASGSKD 243 (464)
T ss_pred hhhheeccCCCCceeEEecCCCeEEEEeccCCc--------------hhheeccCCCCcceeccCCc---cceeEEccCC
Confidence 789999999999999999999999999986311 11122578889999999998 6699999999
Q ss_pred ceEEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCC
Q 000410 1268 CGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPN 1347 (1553)
Q Consensus 1268 g~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~ 1347 (1553)
..|++||.|+++|+.++.. |...|..+.|+|+++||+++|.|..++++|+|+.+.+..++. |...+.++.| +|-..
T Consensus 244 nlVKlWDprSg~cl~tlh~--HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~-Hkkdv~~~~W-hP~~~ 319 (464)
T KOG0284|consen 244 NLVKLWDPRSGSCLATLHG--HKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRG-HKKDVTSLTW-HPLNE 319 (464)
T ss_pred ceeEeecCCCcchhhhhhh--ccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhc-chhhheeecc-ccccc
Confidence 9999999999999999976 899999999999999999999999999999998888888775 6678999999 77653
Q ss_pred CccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCC
Q 000410 1348 AAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNE 1427 (1553)
Q Consensus 1348 ~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~ 1427 (1553)
.++.+|+.||.|..|.+...+.+.. .
T Consensus 320 --------~lftsgg~Dgsvvh~~v~~~~p~~~----------------------------------------------i 345 (464)
T KOG0284|consen 320 --------SLFTSGGSDGSVVHWVVGLEEPLGE----------------------------------------------I 345 (464)
T ss_pred --------cceeeccCCCceEEEeccccccccC----------------------------------------------C
Confidence 4788899999999999862211100 1
Q ss_pred CCCCccCcEEeccCCCCeEE-EccCCCeEEEEeCCCCCC
Q 000410 1428 PPPRLLGIRSLLPLPGGDLL-TGGTDLKIRRWDHCSPGR 1465 (1553)
Q Consensus 1428 ~~~~~~~V~sl~~sp~g~ll-Tgg~Dg~IrlWDl~~~~~ 1465 (1553)
..+|...|++++|+|-|.|+ ||+.|+++|||.-..+..
T Consensus 346 ~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~rp~d 384 (464)
T KOG0284|consen 346 PPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRNRPGD 384 (464)
T ss_pred CcccccceeeeeccccceeEeecCCCcceeeeccCCCCC
Confidence 24577799999999999655 999999999999876543
No 389
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1e-29 Score=283.65 Aligned_cols=241 Identities=22% Similarity=0.343 Sum_probs=186.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC--CCC----eeEEEEEEEeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID--HPH----VWAFQFWQETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~--hpn----Iv~~~~~~~~~ 97 (1553)
+|++.+.+|+|.||+|..|.+.+ ..||||++. ....|.+.-.-|+++|.++. -|+ ++++.++|+-.
T Consensus 90 Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik------~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyr 163 (415)
T KOG0671|consen 90 RYEIVDLLGEGTFGKVVECWDRETKEHVALKIIK------NVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYR 163 (415)
T ss_pred ceehhhhhcCCcccceEEEeecCCCceehHHHHH------HHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhcc
Confidence 78999999999999999999875 469999984 34566666677778888883 233 78889999999
Q ss_pred CEEEEEeccccCCHHHHhcCCCC--CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC---------------
Q 000410 98 KAAYLLRQYFFNSLRDRLSTPPF--LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW--------------- 160 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l~~~~~--l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~--------------- 160 (1553)
++.+||+|.++-+++|++..+.. ++...++.|++||++++++||+.+++|-||||||||+.+.
T Consensus 164 ghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~ 243 (415)
T KOG0671|consen 164 GHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFI 243 (415)
T ss_pred CceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCcccee
Confidence 99999999999899999988754 7889999999999999999999999999999999998531
Q ss_pred -----CcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHH
Q 000410 161 -----NWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELF 235 (1553)
Q Consensus 161 -----~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLl 235 (1553)
-.|+|+|||.|..... . ..+..-|..|+|||++.+ -..+..+||||+||||+||+
T Consensus 244 r~~ks~~I~vIDFGsAtf~~e--~--------hs~iVsTRHYRAPEViLg----------LGwS~pCDvWSiGCIL~Ely 303 (415)
T KOG0671|consen 244 RPLKSTAIKVIDFGSATFDHE--H--------HSTIVSTRHYRAPEVILG----------LGWSQPCDVWSIGCILVELY 303 (415)
T ss_pred ccCCCcceEEEecCCcceecc--C--------cceeeeccccCCchheec----------cCcCCccCceeeeeEEEEee
Confidence 2489999999874311 1 123345778999998873 45778999999999999999
Q ss_pred cCCCCCCchH----HHHH---------------------HhcCCCCCC---------------CCC------CCCCHHHH
Q 000410 236 LEVPFFELSH----LLAY---------------------RRGQYDPSQ---------------HLE------KIPDSGIR 269 (1553)
Q Consensus 236 tg~~pf~~~~----~~~~---------------------~~~~~~~~~---------------~~~------~~~~~~l~ 269 (1553)
+|...|...+ +..+ .++..+... .+. .....++.
T Consensus 304 tG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~Lf 383 (415)
T KOG0671|consen 304 TGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLF 383 (415)
T ss_pred ccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHH
Confidence 9988884221 1110 011111000 000 00123688
Q ss_pred HHHHHhcccCcCCCCCHHHHHHh
Q 000410 270 KMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 270 ~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+||++||..||.+|+|+.|+|.|
T Consensus 384 DLl~~mL~fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 384 DLLRRMLEFDPARRITLREALSH 406 (415)
T ss_pred HHHHHHHccCccccccHHHHhcC
Confidence 99999999999999999999998
No 390
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.96 E-value=3e-27 Score=247.02 Aligned_cols=275 Identities=16% Similarity=0.247 Sum_probs=218.6
Q ss_pred CCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCCCcccccc
Q 000410 1151 HSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYS 1230 (1553)
Q Consensus 1151 ~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~ 1230 (1553)
.-+|||+|.|.|||+|.+.++. +..+.....+.|..+...|+++.||+|+. ..|++||+++.+.
T Consensus 10 ~viLvsA~YDhTIRfWqa~tG~------C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np--------- 73 (311)
T KOG0315|consen 10 PVILVSAGYDHTIRFWQALTGI------CSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNP--------- 73 (311)
T ss_pred ceEEEeccCcceeeeeehhcCe------EEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCC---------
Confidence 3589999999999999999886 55566666778999999999999998885 6799999985221
Q ss_pred ccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeC
Q 000410 1231 GISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSS 1310 (1553)
Q Consensus 1231 ~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~ 1310 (1553)
..+..+. .+..-|..+.|.-+ |+.+++|+.||++++||+|...+.+.++ +..+|++++.+|++.-|++|..
T Consensus 74 --~Pv~t~e-~h~kNVtaVgF~~d---grWMyTgseDgt~kIWdlR~~~~qR~~~---~~spVn~vvlhpnQteLis~dq 144 (311)
T KOG0315|consen 74 --NPVATFE-GHTKNVTAVGFQCD---GRWMYTGSEDGTVKIWDLRSLSCQRNYQ---HNSPVNTVVLHPNQTELISGDQ 144 (311)
T ss_pred --CceeEEe-ccCCceEEEEEeec---CeEEEecCCCceEEEEeccCcccchhcc---CCCCcceEEecCCcceEEeecC
Confidence 1222222 34445778889998 8899999999999999999988877776 4689999999999999999999
Q ss_pred CCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCC
Q 000410 1311 RGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDT 1390 (1553)
Q Consensus 1311 dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~ 1390 (1553)
+|.|++||++...+...+-.....+|.++.. .|+ |.+++.+...|...+|++-+.+....+.
T Consensus 145 sg~irvWDl~~~~c~~~liPe~~~~i~sl~v-~~d---------gsml~a~nnkG~cyvW~l~~~~~~s~l~-------- 206 (311)
T KOG0315|consen 145 SGNIRVWDLGENSCTHELIPEDDTSIQSLTV-MPD---------GSMLAAANNKGNCYVWRLLNHQTASELE-------- 206 (311)
T ss_pred CCcEEEEEccCCccccccCCCCCcceeeEEE-cCC---------CcEEEEecCCccEEEEEccCCCccccce--------
Confidence 9999999999887777666656667888877 554 5588888889999999997643211111
Q ss_pred ccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccCCCeEEEEeCCCC-CCceE
Q 000410 1391 EMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSP-GRSYC 1468 (1553)
Q Consensus 1391 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWDl~~~-~~s~~ 1468 (1553)
|+. ....|...+..+.++|++ .|+|+|+|.++++|++++. +...
T Consensus 207 -----------P~~----------------------k~~ah~~~il~C~lSPd~k~lat~ssdktv~iwn~~~~~kle~- 252 (311)
T KOG0315|consen 207 -----------PVH----------------------KFQAHNGHILRCLLSPDVKYLATCSSDKTVKIWNTDDFFKLEL- 252 (311)
T ss_pred -----------Ehh----------------------heecccceEEEEEECCCCcEEEeecCCceEEEEecCCceeeEE-
Confidence 111 123455678889999999 5779999999999998754 1111
Q ss_pred EeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeeecCCcEEEEEcCCce
Q 000410 1469 ICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGA 1548 (1553)
Q Consensus 1469 ~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~ 1548 (1553)
.+.||+.++.|. +|+.+|++|+|||.|+.
T Consensus 253 --------------------------------------------------~l~gh~rWvWdc-~FS~dg~YlvTassd~~ 281 (311)
T KOG0315|consen 253 --------------------------------------------------VLTGHQRWVWDC-AFSADGEYLVTASSDHT 281 (311)
T ss_pred --------------------------------------------------EeecCCceEEee-eeccCccEEEecCCCCc
Confidence 123599999999 79999999999999999
Q ss_pred EEEcC
Q 000410 1549 IKVWK 1553 (1553)
Q Consensus 1549 IkVWk 1553 (1553)
+++|+
T Consensus 282 ~rlW~ 286 (311)
T KOG0315|consen 282 ARLWD 286 (311)
T ss_pred eeecc
Confidence 99996
No 391
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.96 E-value=1.3e-28 Score=278.97 Aligned_cols=294 Identities=17% Similarity=0.239 Sum_probs=235.4
Q ss_pred ccEeeeccccccCeeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeC
Q 000410 1129 GILVAHLQEHCSAVNEIAISH-DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC 1207 (1553)
Q Consensus 1129 G~lv~~l~~H~~~V~~l~~sp-d~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~ 1207 (1553)
-+++.+++||+..|+++.|.| .+.+|+|||.|+.|+||++-... ++..+|.+|..+|.+++|+..|..|.++|.
T Consensus 204 kk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~-----~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sf 278 (503)
T KOG0282|consen 204 KKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDR-----RCLRTFKGHRKPVRDASFNNCGTSFLSASF 278 (503)
T ss_pred HhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCc-----ceehhhhcchhhhhhhhccccCCeeeeeec
Confidence 357899999999999999999 88999999999999999997632 367799999999999999999999999999
Q ss_pred CCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccC
Q 000410 1208 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1287 (1553)
Q Consensus 1208 DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~ 1287 (1553)
|+.|++||+++.. .......+..+.|+.|+|++ .+.+++|+.|+.|+.||+|+++.+..+..
T Consensus 279 D~~lKlwDtETG~---------------~~~~f~~~~~~~cvkf~pd~--~n~fl~G~sd~ki~~wDiRs~kvvqeYd~- 340 (503)
T KOG0282|consen 279 DRFLKLWDTETGQ---------------VLSRFHLDKVPTCVKFHPDN--QNIFLVGGSDKKIRQWDIRSGKVVQEYDR- 340 (503)
T ss_pred ceeeeeeccccce---------------EEEEEecCCCceeeecCCCC--CcEEEEecCCCcEEEEeccchHHHHHHHh-
Confidence 9999999998521 11122346678899999995 46999999999999999999999988866
Q ss_pred CCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeE
Q 000410 1288 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEV 1367 (1553)
Q Consensus 1288 ~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V 1367 (1553)
|.+.|.++.|-++|+.+++.+.|+.+++|+.+...+++-...++.....++.. +| +++++++=+.|+.|
T Consensus 341 -hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~-~P---------~~~~~~aQs~dN~i 409 (503)
T KOG0282|consen 341 -HLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTL-HP---------NGKWFAAQSMDNYI 409 (503)
T ss_pred -hhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceec-CC---------CCCeehhhccCceE
Confidence 89999999999999999999999999999999988887766554444444444 44 45688888889999
Q ss_pred EEEEcCCCc---EEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC
Q 000410 1368 SLWNAENGS---CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG 1444 (1553)
Q Consensus 1368 ~vWDl~tg~---~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g 1444 (1553)
.++.+.-.- ..+.|.++.. .+.-..+.|+|||
T Consensus 410 ~ifs~~~~~r~nkkK~feGh~v---------------------------------------------aGys~~v~fSpDG 444 (503)
T KOG0282|consen 410 AIFSTVPPFRLNKKKRFEGHSV---------------------------------------------AGYSCQVDFSPDG 444 (503)
T ss_pred EEEecccccccCHhhhhcceec---------------------------------------------cCceeeEEEcCCC
Confidence 888854211 1111111110 1134567899999
Q ss_pred -eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCC
Q 000410 1445 -DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCH 1523 (1553)
Q Consensus 1445 -~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H 1523 (1553)
+|++|.+||++.+||.++.+... .+.+|
T Consensus 445 ~~l~SGdsdG~v~~wdwkt~kl~~---------------------------------------------------~lkah 473 (503)
T KOG0282|consen 445 RTLCSGDSDGKVNFWDWKTTKLVS---------------------------------------------------KLKAH 473 (503)
T ss_pred CeEEeecCCccEEEeechhhhhhh---------------------------------------------------ccccC
Confidence 67799999999999987543322 23348
Q ss_pred ccceeEEeeeecC-CcEEEEEcCCceEEEcC
Q 000410 1524 RDSILSLGSVKLN-QRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1524 ~d~I~~va~~~~~-~~~LvSas~DG~IkVWk 1553 (1553)
...+..+ .|+|. ..-+||||.||.||+|+
T Consensus 474 ~~~ci~v-~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 474 DQPCIGV-DWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred CcceEEE-EecCCCcceeEecccCceeEecC
Confidence 8888888 78887 55799999999999996
No 392
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.96 E-value=8.9e-27 Score=269.40 Aligned_cols=287 Identities=25% Similarity=0.401 Sum_probs=231.0
Q ss_pred eeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcE
Q 000410 1132 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGII 1211 (1553)
Q Consensus 1132 v~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I 1211 (1553)
+.++.+|.++|++++|+|+++++++|+.||.|++||..+.+ .......|...+.++.|+++++.+++++.||.|
T Consensus 2 ~~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i 75 (289)
T cd00200 2 RRTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGE------LLRTLKGHTGPVRDVAASADGTYLASGSSDKTI 75 (289)
T ss_pred chHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCC------cEEEEecCCcceeEEEECCCCCEEEEEcCCCeE
Confidence 46788999999999999999999999999999999998654 334566777888999999999999999999999
Q ss_pred EEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCc
Q 000410 1212 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1291 (1553)
Q Consensus 1212 ~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g 1291 (1553)
++|++.... ..... ..+...+.++.|+++ +.++++++.+|.|.+||+++++....+.. |.+
T Consensus 76 ~i~~~~~~~-------------~~~~~-~~~~~~i~~~~~~~~---~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~ 136 (289)
T cd00200 76 RLWDLETGE-------------CVRTL-TGHTSYVSSVAFSPD---GRILSSSSRDKTIKVWDVETGKCLTTLRG--HTD 136 (289)
T ss_pred EEEEcCccc-------------ceEEE-eccCCcEEEEEEcCC---CCEEEEecCCCeEEEEECCCcEEEEEecc--CCC
Confidence 999997310 11111 234557888899997 56888888899999999998888777764 778
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEE
Q 000410 1292 YVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWN 1371 (1553)
Q Consensus 1292 ~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWD 1371 (1553)
.|++++|+|++.++++|+.+|.+.+||++.+..+..+.. +...+..+.+ .|. +..+++++.++.|.+||
T Consensus 137 ~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~-~~~---------~~~l~~~~~~~~i~i~d 205 (289)
T cd00200 137 WVNSVAFSPDGTFVASSSQDGTIKLWDLRTGKCVATLTG-HTGEVNSVAF-SPD---------GEKLLSSSSDGTIKLWD 205 (289)
T ss_pred cEEEEEEcCcCCEEEEEcCCCcEEEEEccccccceeEec-CccccceEEE-CCC---------cCEEEEecCCCcEEEEE
Confidence 899999999999999988899999999998888877764 5557888887 553 45788888899999999
Q ss_pred cCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCCeEE-Ecc
Q 000410 1372 AENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLL-TGG 1450 (1553)
Q Consensus 1372 l~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~ll-Tgg 1450 (1553)
+.+++....+. .+...+.++.|+|++.++ +++
T Consensus 206 ~~~~~~~~~~~-----------------------------------------------~~~~~i~~~~~~~~~~~~~~~~ 238 (289)
T cd00200 206 LSTGKCLGTLR-----------------------------------------------GHENGVNSVAFSPDGYLLASGS 238 (289)
T ss_pred CCCCceecchh-----------------------------------------------hcCCceEEEEEcCCCcEEEEEc
Confidence 98876544432 112268899999988555 555
Q ss_pred CCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEE
Q 000410 1451 TDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSL 1530 (1553)
Q Consensus 1451 ~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~v 1530 (1553)
.|+.|++||+.+.+....+. .|...|.++
T Consensus 239 ~~~~i~i~~~~~~~~~~~~~---------------------------------------------------~~~~~i~~~ 267 (289)
T cd00200 239 EDGTIRVWDLRTGECVQTLS---------------------------------------------------GHTNSVTSL 267 (289)
T ss_pred CCCcEEEEEcCCceeEEEcc---------------------------------------------------ccCCcEEEE
Confidence 59999999987543222111 277889999
Q ss_pred eeeecCCcEEEEEcCCceEEEcC
Q 000410 1531 GSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1531 a~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.|++++.+|++++.||.|+||+
T Consensus 268 -~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 268 -AWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred -EECCCCCEEEEecCCCeEEecC
Confidence 7999999999999999999997
No 393
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=99.96 E-value=4.6e-27 Score=245.69 Aligned_cols=269 Identities=19% Similarity=0.264 Sum_probs=216.1
Q ss_pred CCCcc-cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCc
Q 000410 1122 DSGWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1200 (1553)
Q Consensus 1122 ~~~W~-p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~ 1200 (1553)
-+.|. ..|++..+++...+.|+++...||+++||+|+. -.||++|+++...+ +..+|.+|...|+++.|..+|+
T Consensus 22 IRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~----Pv~t~e~h~kNVtaVgF~~dgr 96 (311)
T KOG0315|consen 22 IRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPN----PVATFEGHTKNVTAVGFQCDGR 96 (311)
T ss_pred eeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCC----ceeEEeccCCceEEEEEeecCe
Confidence 45798 669999999988899999999999999999887 56999999987632 6779999998999999999999
Q ss_pred EEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcc
Q 000410 1201 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1280 (1553)
Q Consensus 1201 ~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~ 1280 (1553)
.+++||.||+++|||++.. ...| ..++.++|+++..+|+ +..|++|+++|.|++||++...+
T Consensus 97 WMyTgseDgt~kIWdlR~~-------------~~qR--~~~~~spVn~vvlhpn---QteLis~dqsg~irvWDl~~~~c 158 (311)
T KOG0315|consen 97 WMYTGSEDGTVKIWDLRSL-------------SCQR--NYQHNSPVNTVVLHPN---QTELISGDQSGNIRVWDLGENSC 158 (311)
T ss_pred EEEecCCCceEEEEeccCc-------------ccch--hccCCCCcceEEecCC---cceEEeecCCCcEEEEEccCCcc
Confidence 9999999999999999831 1222 2245588999999999 66999999999999999999877
Q ss_pred cceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc------ccceeeccccCCcceEEeecCCCCCccccCC
Q 000410 1281 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLV------PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTA 1354 (1553)
Q Consensus 1281 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~------~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~ 1354 (1553)
...+-- ...-.|+++.+.|||.+|+.+...|.+.+|++-... ++..++. |.+-|.++.+ +++
T Consensus 159 ~~~liP-e~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~a-h~~~il~C~l----------SPd 226 (311)
T KOG0315|consen 159 THELIP-EDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQA-HNGHILRCLL----------SPD 226 (311)
T ss_pred ccccCC-CCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheec-ccceEEEEEE----------CCC
Confidence 765542 244679999999999999999999999999987543 2333332 3444555444 456
Q ss_pred CCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccC
Q 000410 1355 RPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLG 1434 (1553)
Q Consensus 1355 ~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 1434 (1553)
+++++++|.|.+++||+.++. ..-.+. ..+|...
T Consensus 227 ~k~lat~ssdktv~iwn~~~~-~kle~~---------------------------------------------l~gh~rW 260 (311)
T KOG0315|consen 227 VKYLATCSSDKTVKIWNTDDF-FKLELV---------------------------------------------LTGHQRW 260 (311)
T ss_pred CcEEEeecCCceEEEEecCCc-eeeEEE---------------------------------------------eecCCce
Confidence 679999999999999999976 111111 0234458
Q ss_pred cEEeccCCCC-eEEEccCCCeEEEEeCCCCCCceEEeC
Q 000410 1435 IRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICG 1471 (1553)
Q Consensus 1435 V~sl~~sp~g-~llTgg~Dg~IrlWDl~~~~~s~~~~g 1471 (1553)
|+.++|+.+| +|+||++|+.+|+||+..++..+...|
T Consensus 261 vWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~g 298 (311)
T KOG0315|consen 261 VWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQG 298 (311)
T ss_pred EEeeeeccCccEEEecCCCCceeecccccCceeeecCC
Confidence 9999999999 788999999999999998877665554
No 394
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.96 E-value=3.9e-29 Score=272.76 Aligned_cols=243 Identities=22% Similarity=0.328 Sum_probs=189.8
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeC------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETD------ 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~------ 97 (1553)
+|.-++.+|.|.- .|..|-+. +..||+|....+ .......++-.+|...+..++|+||++++.+|.-.
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~p---f~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~ 93 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRP---FQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEF 93 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCc---cccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHH
Confidence 7888899999988 66666553 577999988766 22244455667777899999999999999998543
Q ss_pred CEEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 98 KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
...|+||||+..+|...+..+ +.-..+..|++|+++|++|||+.||+||||||+||++..++.+||.|||++...
T Consensus 94 ~e~y~v~e~m~~nl~~vi~~e--lDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e--- 168 (369)
T KOG0665|consen 94 QEVYLVMELMDANLCQVILME--LDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTE--- 168 (369)
T ss_pred HhHHHHHHhhhhHHHHHHHHh--cchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhccc---
Confidence 358999999999999988743 788999999999999999999999999999999999999999999999998743
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHH---------
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA--------- 248 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~--------- 248 (1553)
+..+.......+..|.|||++. +..+.+.+||||+||++.||++|+..|.+.+...
T Consensus 169 -----~~~~~mtpyVvtRyyrapevil----------~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~l 233 (369)
T KOG0665|consen 169 -----DTDFMMTPYVVTRYYRAPEVIL----------GMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQL 233 (369)
T ss_pred -----CcccccCchhheeeccCchhee----------ccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHh
Confidence 1223344556688899999875 3348889999999999999999998886432110
Q ss_pred -----------------HHh--cC---CC-----CCC------CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 249 -----------------YRR--GQ---YD-----PSQ------HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 249 -----------------~~~--~~---~~-----~~~------~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
|.. .+ +. +.. ..++.....+++++.+||..||++|.+++++|+|
T Consensus 234 gtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 234 GTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred cCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 000 00 11 111 1112334578999999999999999999999999
No 395
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-28 Score=285.77 Aligned_cols=240 Identities=18% Similarity=0.214 Sum_probs=189.4
Q ss_pred EEEEeeccCcEEEEEEEECC---c---eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 29 LKEVLGGSRFFKSILCKHDE---G---LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 29 ~~~~LG~G~fg~V~~a~~~~---~---~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
+.+.||.|-||.||+|.+.+ + .||||.-+..... +. .+.|..|..+|+.++||||+++++++.+ ...||
T Consensus 393 l~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~---d~-tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wi 467 (974)
T KOG4257|consen 393 LKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTP---DD-TEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWI 467 (974)
T ss_pred HHHhhcCCcccceeeeEecccccCcceeeeeehhccCCCh---hh-HHHHHHHHHHHHhCCCcchhheeeeeec-cceeE
Confidence 34579999999999998743 2 2888988664322 22 5567788899999999999999999875 46899
Q ss_pred Eecccc-CCHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPP-FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~-~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
|||+++ |.|..++..+. .|+......+++||..||.|||+.++|||||-..||||.+...|||+|||+++...
T Consensus 468 vmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~e----- 542 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLE----- 542 (974)
T ss_pred EEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhcc-----
Confidence 999999 99999998764 58999999999999999999999999999999999999999999999999998652
Q ss_pred CCCcceeeecC-CCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchH----HHHHHhcCC
Q 000410 181 PSDFSFFFDTG-GKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH----LLAYRRGQY 254 (1553)
Q Consensus 181 ~~~~~~~~~~~-~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~----~~~~~~~~~ 254 (1553)
+..++..+. .-..-|||||-+. -..++.++|||-||+++||++. |..||.+-. +..+.+|..
T Consensus 543 --d~~yYkaS~~kLPIKWmaPESIN----------fRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeR 610 (974)
T KOG4257|consen 543 --DDAYYKASRGKLPIKWMAPESIN----------FRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGER 610 (974)
T ss_pred --ccchhhccccccceeecCccccc----------hhcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCC
Confidence 223333222 2234599999553 4578999999999999999986 666774321 122233332
Q ss_pred CCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 255 DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 255 ~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
. ..+...++.+..|+.+||..||.+||++.++...+
T Consensus 611 l---P~P~nCPp~LYslmskcWayeP~kRPrftei~~~l 646 (974)
T KOG4257|consen 611 L---PCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAIL 646 (974)
T ss_pred C---CCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHH
Confidence 2 34555667899999999999999999999887654
No 396
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.96 E-value=7.7e-29 Score=295.94 Aligned_cols=199 Identities=24% Similarity=0.274 Sum_probs=166.0
Q ss_pred CccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC--
Q 000410 23 SSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK-- 98 (1553)
Q Consensus 23 ~~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~-- 98 (1553)
..|-|...+.||+|+||.||+++++. +.||||.+.+..... -.+...+|+++|++++|||||+++++-++..
T Consensus 11 ~~y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r----~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~ 86 (732)
T KOG4250|consen 11 ENYLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLR----PRERWCREIEILKKLNHPNIVKLFDIEETKFLG 86 (732)
T ss_pred CCcceeehhhhcCCccceeeeecccccccchhHHhhhhhcccc----hHHHHHHHHHHHHHcCchhhhhhcccCCccccC
Confidence 44678888999999999999999864 669999997753222 2345667789999999999999999876544
Q ss_pred ----EEEEEecccc-CCHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec--CC--cEEEe
Q 000410 99 ----AAYLLRQYFF-NSLRDRLSTPP---FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS--WN--WLYLS 166 (1553)
Q Consensus 99 ----~~~lV~E~~~-gsL~d~l~~~~---~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~--~~--~vkL~ 166 (1553)
...+|||||. |+|+.++.+.. .|++.+.+.++..+..||.|||++||+||||||.||++-. +| ..||+
T Consensus 87 ~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLt 166 (732)
T KOG4250|consen 87 LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLT 166 (732)
T ss_pred cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeee
Confidence 4689999999 69999997642 4999999999999999999999999999999999999853 34 47999
Q ss_pred ecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCC
Q 000410 167 DFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFE 242 (1553)
Q Consensus 167 DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~ 242 (1553)
|||.|+.... ...+.+..||..|++||++.. .+.|+..+|.||+||++|++.||..||.
T Consensus 167 DfG~Arel~d--------~s~~~S~vGT~~YLhPel~E~---------q~~y~~tVDLWS~GvtlY~caTG~lPF~ 225 (732)
T KOG4250|consen 167 DFGAARELDD--------NSLFTSLVGTEEYLHPELYER---------QKKYTATVDLWSFGVTLYECATGELPFI 225 (732)
T ss_pred cccccccCCC--------CCeeeeecCchhhcChHHHhh---------ccCcCceeehhhhhhHHHHHhccCCCCC
Confidence 9999997621 125677789999999998742 3578999999999999999999988884
No 397
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=1.2e-27 Score=264.90 Aligned_cols=292 Identities=19% Similarity=0.240 Sum_probs=228.7
Q ss_pred eeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEE
Q 000410 1133 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIH 1212 (1553)
Q Consensus 1133 ~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~ 1212 (1553)
..|++|++.|.-+.||++|+++||||.|.|+-||++..... ++-..+..+|..+|.-+.|+|+.+++++|+.|..+.
T Consensus 218 qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~---~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~ 294 (519)
T KOG0293|consen 218 QILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVH---FKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLS 294 (519)
T ss_pred hhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcc---eeeeeeeecccCceEEEEECCCCCeEEecCchHhee
Confidence 46899999999999999999999999999999999875442 445668889999999999999999999999999999
Q ss_pred EEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcc
Q 000410 1213 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGY 1292 (1553)
Q Consensus 1213 vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~ 1292 (1553)
+||+++.. ....+...++..+.+++|.|+ +..+++|+.|++|..||+.. .....-++ .....
T Consensus 295 lwDv~tgd-------------~~~~y~~~~~~S~~sc~W~pD---g~~~V~Gs~dr~i~~wdlDg-n~~~~W~g-vr~~~ 356 (519)
T KOG0293|consen 295 LWDVDTGD-------------LRHLYPSGLGFSVSSCAWCPD---GFRFVTGSPDRTIIMWDLDG-NILGNWEG-VRDPK 356 (519)
T ss_pred eccCCcch-------------hhhhcccCcCCCcceeEEccC---CceeEecCCCCcEEEecCCc-chhhcccc-cccce
Confidence 99998522 122233335677888899999 66899999999999999974 33322222 12356
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEc
Q 000410 1293 VSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNA 1372 (1553)
Q Consensus 1293 Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl 1372 (1553)
|.++++.+||.++++-+.|..+++++........... ...+|++++. + .+++++++--.+.++.+||+
T Consensus 357 v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lis--e~~~its~~i-S---------~d~k~~LvnL~~qei~LWDl 424 (519)
T KOG0293|consen 357 VHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLIS--EEQPITSFSI-S---------KDGKLALVNLQDQEIHLWDL 424 (519)
T ss_pred eEEEEEcCCCcEEEEEecccceeeechhhhhhhcccc--ccCceeEEEE-c---------CCCcEEEEEcccCeeEEeec
Confidence 9999999999999999999999999998777665433 3457888887 3 35678888889999999999
Q ss_pred CCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccC-CCCeEEEccC
Q 000410 1373 ENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL-PGGDLLTGGT 1451 (1553)
Q Consensus 1373 ~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~s-p~g~llTgg~ 1451 (1553)
+.....+.+.++.. ++ --|+++.-- .+.++++|+.
T Consensus 425 ~e~~lv~kY~Ghkq-------------------------------------------~~-fiIrSCFgg~~~~fiaSGSE 460 (519)
T KOG0293|consen 425 EENKLVRKYFGHKQ-------------------------------------------GH-FIIRSCFGGGNDKFIASGSE 460 (519)
T ss_pred chhhHHHHhhcccc-------------------------------------------cc-eEEEeccCCCCcceEEecCC
Confidence 85544333332211 00 024443322 2347889999
Q ss_pred CCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEe
Q 000410 1452 DLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLG 1531 (1553)
Q Consensus 1452 Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va 1531 (1553)
|++|++|+..+++...+++| |...|++|
T Consensus 461 D~kvyIWhr~sgkll~~LsG---------------------------------------------------Hs~~vNcV- 488 (519)
T KOG0293|consen 461 DSKVYIWHRISGKLLAVLSG---------------------------------------------------HSKTVNCV- 488 (519)
T ss_pred CceEEEEEccCCceeEeecC---------------------------------------------------CcceeeEE-
Confidence 99999999988877666654 99999999
Q ss_pred eeecC-CcEEEEEcCCceEEEcC
Q 000410 1532 SVKLN-QRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1532 ~~~~~-~~~LvSas~DG~IkVWk 1553 (1553)
+|+|. -.|+||||+||+|+||+
T Consensus 489 swNP~~p~m~ASasDDgtIRIWg 511 (519)
T KOG0293|consen 489 SWNPADPEMFASASDDGTIRIWG 511 (519)
T ss_pred ecCCCCHHHhhccCCCCeEEEec
Confidence 69886 67999999999999995
No 398
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.96 E-value=8e-27 Score=250.48 Aligned_cols=290 Identities=16% Similarity=0.241 Sum_probs=230.9
Q ss_pred eeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcE
Q 000410 1132 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGII 1211 (1553)
Q Consensus 1132 v~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I 1211 (1553)
+..+.+|++.|+.+.|+|+|.+||||+.|..|-+|++..-.++ ..+.++|++.|+.+.|..+++.+++||.|.+|
T Consensus 40 ~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN-----~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v 114 (338)
T KOG0265|consen 40 IMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCEN-----FWVLKGHSGAVMELHGMRDGSHILSCGTDKTV 114 (338)
T ss_pred hhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccc-----eeeeccccceeEeeeeccCCCEEEEecCCceE
Confidence 4567899999999999999999999999999999997754432 23556999999999999999999999999999
Q ss_pred EEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCc
Q 000410 1212 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1291 (1553)
Q Consensus 1212 ~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g 1291 (1553)
+.||+++.. .+++. ..|...|+.+. |..-...++.+++.|+++++||+|+..+++++++ .-
T Consensus 115 ~~wD~~tG~-------------~~rk~-k~h~~~vNs~~--p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~---ky 175 (338)
T KOG0265|consen 115 RGWDAETGK-------------RIRKH-KGHTSFVNSLD--PSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFEN---KY 175 (338)
T ss_pred EEEecccce-------------eeehh-ccccceeeecC--ccccCCeEEEecCCCceEEEEeecccchhhcccc---ce
Confidence 999998522 12222 24566777765 3322245889999999999999999999998875 55
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEE
Q 000410 1292 YVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWN 1371 (1553)
Q Consensus 1292 ~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWD 1371 (1553)
.+++++|...+..+.+|+-|+.|++||+|....+..... |..+|+.+.. ++. |..+.+-+-|..+++||
T Consensus 176 qltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsG-h~DtIt~lsl-s~~---------gs~llsnsMd~tvrvwd 244 (338)
T KOG0265|consen 176 QLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSG-HADTITGLSL-SRY---------GSFLLSNSMDNTVRVWD 244 (338)
T ss_pred eEEEEEecccccceeeccccCceeeeccccCcceEEeec-ccCceeeEEe-ccC---------CCccccccccceEEEEE
Confidence 799999999999999999999999999999888887775 6778988877 554 45788888999999999
Q ss_pred cCC----CcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCCeEE
Q 000410 1372 AEN----GSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLL 1447 (1553)
Q Consensus 1372 l~t----g~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~ll 1447 (1553)
++- ..|+.++.++.-.- ......+.|+|++..+
T Consensus 245 ~rp~~p~~R~v~if~g~~hnf-------------------------------------------eknlL~cswsp~~~~i 281 (338)
T KOG0265|consen 245 VRPFAPSQRCVKIFQGHIHNF-------------------------------------------EKNLLKCSWSPNGTKI 281 (338)
T ss_pred ecccCCCCceEEEeecchhhh-------------------------------------------hhhcceeeccCCCCcc
Confidence 973 34566665332100 0023466889998544
Q ss_pred -EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccc
Q 000410 1448 -TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDS 1526 (1553)
Q Consensus 1448 -Tgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~ 1526 (1553)
+|+.|+.+++||.......+.+ .||.+.
T Consensus 282 ~ags~dr~vyvwd~~~r~~lykl---------------------------------------------------pGh~gs 310 (338)
T KOG0265|consen 282 TAGSADRFVYVWDTTSRRILYKL---------------------------------------------------PGHYGS 310 (338)
T ss_pred ccccccceEEEeecccccEEEEc---------------------------------------------------CCccee
Confidence 7888999999997654333322 349999
Q ss_pred eeEEeeeecCCcEEEEEcCCceEEE
Q 000410 1527 ILSLGSVKLNQRLLISSSRDGAIKV 1551 (1553)
Q Consensus 1527 I~~va~~~~~~~~LvSas~DG~IkV 1551 (1553)
|+++ .|+|...+|.|++.|.+|.+
T Consensus 311 vn~~-~Fhp~e~iils~~sdk~i~l 334 (338)
T KOG0265|consen 311 VNEV-DFHPTEPIILSCSSDKTIYL 334 (338)
T ss_pred EEEe-eecCCCcEEEEeccCceeEe
Confidence 9999 79999999999999999875
No 399
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-28 Score=289.26 Aligned_cols=250 Identities=18% Similarity=0.157 Sum_probs=201.6
Q ss_pred cceEEEEEeeccCcEEEEEEEECC--c---eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE
Q 000410 25 YNLVLKEVLGGSRFFKSILCKHDE--G---LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 25 ~~y~~~~~LG~G~fg~V~~a~~~~--~---~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~ 99 (1553)
.++++.+.||+|.||.|++|.++. + .||||.+.... .......|.+|+.+|.+|+|||++++|++..+ ..
T Consensus 110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~----l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp 184 (1039)
T KOG0199|consen 110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDS----LNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QP 184 (1039)
T ss_pred HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCc----cchhHHHHHHHHHHHHhccCcceeEEeeeecc-ch
Confidence 367888999999999999999864 2 39999985432 22255678899999999999999999999887 67
Q ss_pred EEEEecccc-CCHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccC
Q 000410 100 AYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~ 176 (1553)
..||||+++ |+|.++|.+ ++.|-......++.||+.|+.||.++++|||||-..|+|+-+...|||+|||+.+....
T Consensus 185 ~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ 264 (1039)
T KOG0199|consen 185 AMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGE 264 (1039)
T ss_pred hhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCC
Confidence 899999999 899999976 45588899999999999999999999999999999999999999999999999987744
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC-CCCCCchHHHHHHhcCCC
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFELSHLLAYRRGQYD 255 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~pf~~~~~~~~~~~~~~ 255 (1553)
.++ ...+.....-...|+|||.+. ...++.++|+|++||+|||||++ +.||.+..-..+.+..-.
T Consensus 265 ned----~Yvm~p~rkvPfAWCaPEsLr----------h~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~ 330 (1039)
T KOG0199|consen 265 NED----MYVMAPQRKVPFAWCAPESLR----------HRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDA 330 (1039)
T ss_pred CCc----ceEecCCCcCcccccCHhHhc----------cccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccc
Confidence 332 112222223345699999664 56789999999999999999996 889976554443332222
Q ss_pred -CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 256 -PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 256 -~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
..-.-++..++++.+++..||..+|++||++..+.+++
T Consensus 331 ~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 331 GERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred cccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhH
Confidence 11223556678999999999999999999999997653
No 400
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.95 E-value=8.5e-27 Score=289.45 Aligned_cols=300 Identities=21% Similarity=0.323 Sum_probs=240.3
Q ss_pred ccCccEeeecccc-ccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEE
Q 000410 1126 RPRGILVAHLQEH-CSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVV 1204 (1553)
Q Consensus 1126 ~p~G~lv~~l~~H-~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las 1204 (1553)
.+...+...+..| ..+|+++.|+++|+++++++.|+++++|+...... .......+|...|.+++|+|+++.+++
T Consensus 145 ~~~~~~~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~----~~~~~l~~h~~~v~~~~fs~d~~~l~s 220 (456)
T KOG0266|consen 145 SRVFSLEQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS----NLLRELSGHTRGVSDVAFSPDGSYLLS 220 (456)
T ss_pred cccceeeeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc----hhhccccccccceeeeEECCCCcEEEE
Confidence 3333457777666 78999999999999999999999999999965542 122334678888999999999999999
Q ss_pred EeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCccccee
Q 000410 1205 GACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTL 1284 (1553)
Q Consensus 1205 ~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l 1284 (1553)
|+.|++|+|||+.... .......+|...|.+++|+|. ++++++|+.|++|++||++++++...+
T Consensus 221 ~s~D~tiriwd~~~~~-------------~~~~~l~gH~~~v~~~~f~p~---g~~i~Sgs~D~tvriWd~~~~~~~~~l 284 (456)
T KOG0266|consen 221 GSDDKTLRIWDLKDDG-------------RNLKTLKGHSTYVTSVAFSPD---GNLLVSGSDDGTVRIWDVRTGECVRKL 284 (456)
T ss_pred ecCCceEEEeeccCCC-------------eEEEEecCCCCceEEEEecCC---CCEEEEecCCCcEEEEeccCCeEEEee
Confidence 9999999999994210 122333478888899999999 679999999999999999999999999
Q ss_pred ccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--ccceeeccccC-CcceEEeecCCCCCccccCCCCEEEEE
Q 000410 1285 KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLV--PVNSWQYSQVC-PIEKMCLFVPPPNAAVSTTARPLIYVA 1361 (1553)
Q Consensus 1285 ~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~--~l~s~~~~~~~-~I~~l~~~~p~~~~~~~s~~~~~l~s~ 1361 (1553)
.. |.+.|++++|++++++|++++.||.|++||+..+. ++..+...... ++..+++ +| ++.+++++
T Consensus 285 ~~--hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~f-sp---------~~~~ll~~ 352 (456)
T KOG0266|consen 285 KG--HSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQF-SP---------NGKYLLSA 352 (456)
T ss_pred ec--cCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEE-CC---------CCcEEEEe
Confidence 87 99999999999999999999999999999999988 55555554433 5777776 55 45699999
Q ss_pred EcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccC
Q 000410 1362 AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1441 (1553)
Q Consensus 1362 s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~s 1441 (1553)
+.|+.+++||+.++.+...+..+... ...+.+...+
T Consensus 353 ~~d~~~~~w~l~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~ 388 (456)
T KOG0266|consen 353 SLDRTLKLWDLRSGKSVGTYTGHSNL--------------------------------------------VRCIFSPTLS 388 (456)
T ss_pred cCCCeEEEEEccCCcceeeecccCCc--------------------------------------------ceeEeccccc
Confidence 99999999999999998888754331 0022233335
Q ss_pred CCC-eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCcc
Q 000410 1442 PGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSA 1520 (1553)
Q Consensus 1442 p~g-~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 1520 (1553)
+++ .+++|+.|+.|.+||+.+......+
T Consensus 389 ~~~~~i~sg~~d~~v~~~~~~s~~~~~~l--------------------------------------------------- 417 (456)
T KOG0266|consen 389 TGGKLIYSGSEDGSVYVWDSSSGGILQRL--------------------------------------------------- 417 (456)
T ss_pred CCCCeEEEEeCCceEEEEeCCccchhhhh---------------------------------------------------
Confidence 566 6779999999999999864433322
Q ss_pred CCC-ccceeEEeeeecCCcEEEEEc--CCceEEEcC
Q 000410 1521 GCH-RDSILSLGSVKLNQRLLISSS--RDGAIKVWK 1553 (1553)
Q Consensus 1521 ~~H-~d~I~~va~~~~~~~~LvSas--~DG~IkVWk 1553 (1553)
.+| ...|.++ .+++...++++++ .|+.|++|+
T Consensus 418 ~~h~~~~~~~~-~~~~~~~~~~s~s~~~d~~~~~w~ 452 (456)
T KOG0266|consen 418 EGHSKAAVSDL-SSHPTENLIASSSFEGDGLIRLWK 452 (456)
T ss_pred cCCCCCceecc-ccCCCcCeeeecCcCCCceEEEec
Confidence 237 7788888 6899999999999 899999996
No 401
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-28 Score=267.03 Aligned_cols=242 Identities=19% Similarity=0.250 Sum_probs=191.4
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~~~l 102 (1553)
+|.+++.||+|+|++|.++++.. +.+|+|+++|.--. ..+-..-++.|..+..+. +||.++.++.+|+++..+++
T Consensus 251 df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~n--ddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 251 DFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVN--DDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cceeeeeecCcchhhhhheehcccceeeehhhHHHHhcC--CcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 78999999999999999999865 66999999876111 011111233444444444 69999999999999999999
Q ss_pred Eecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCC
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~ 181 (1553)
|.||++ |+|--.+....+|+++.++.+...|..||.|||++||+.||||.+|+|++..|++||+|+|+++....|.+.
T Consensus 329 vieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~- 407 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDT- 407 (593)
T ss_pred EEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcc-
Confidence 999999 598888887778999999999999999999999999999999999999999999999999999976554443
Q ss_pred CCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCc-------hHHHHHH-hcC
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFEL-------SHLLAYR-RGQ 253 (1553)
Q Consensus 182 ~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~-------~~~~~~~-~~~ 253 (1553)
..+.+|||.|+|||++. +..|+..+|.|+||++++||+.|+.||+- .+...|. +..
T Consensus 408 ------tstfcgtpnyiapeilr----------geeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvi 471 (593)
T KOG0695|consen 408 ------TSTFCGTPNYIAPEILR----------GEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVI 471 (593)
T ss_pred ------cccccCCCcccchhhhc----------ccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHH
Confidence 35678999999999765 55789999999999999999999999962 1112221 111
Q ss_pred CCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCH
Q 000410 254 YDPSQHLEKIPDSGIRKMILHMIQLEPELRFSA 286 (1553)
Q Consensus 254 ~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa 286 (1553)
......++...+-....+++..|.+||.+|...
T Consensus 472 lekqiriprslsvkas~vlkgflnkdp~erlgc 504 (593)
T KOG0695|consen 472 LEKQIRIPRSLSVKASHVLKGFLNKDPKERLGC 504 (593)
T ss_pred hhhcccccceeehhhHHHHHHhhcCCcHHhcCC
Confidence 111122344445567789999999999999854
No 402
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.95 E-value=1.7e-29 Score=267.63 Aligned_cols=247 Identities=16% Similarity=0.104 Sum_probs=186.5
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHH-HHhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRE-TFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~-~l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
+.+-+..||.|.||.|++..|+. ...|||.+..... +...+++..|.+ +++.-+.||||+||+....++..||
T Consensus 65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~----~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWi 140 (361)
T KOG1006|consen 65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI----EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWI 140 (361)
T ss_pred hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc----hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceee
Confidence 34455689999999999999974 6699999865522 334445555555 4555579999999999989999999
Q ss_pred EeccccCCH---HHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEecCCcEEEeecCccccccC
Q 000410 103 LRQYFFNSL---RDRLS--TPPFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVTSWNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 103 V~E~~~gsL---~d~l~--~~~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~ 176 (1553)
.||+|.-+| |.++. ++..++|.-+-.|+.-.+.||.||-. .+|+||||||+|||++..|.+||||||.+.....
T Consensus 141 CMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~ 220 (361)
T KOG1006|consen 141 CMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVD 220 (361)
T ss_pred eHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHH
Confidence 999999654 44442 33458999999999999999999986 6899999999999999999999999998765422
Q ss_pred CCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCc--hHHHHHHhcCC
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFEL--SHLLAYRRGQY 254 (1553)
Q Consensus 177 ~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~--~~~~~~~~~~~ 254 (1553)
.. ....-.|-..|||||++.. ....|+-++|+||||++|||+.||..||.. +.+.++.+...
T Consensus 221 Si--------AkT~daGCrpYmAPERi~p--------~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~ 284 (361)
T KOG1006|consen 221 SI--------AKTVDAGCRPYMAPERIDP--------SDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVI 284 (361)
T ss_pred HH--------HhhhccCCccccChhccCC--------ccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHc
Confidence 11 1122234566999999852 233588999999999999999999999863 22333333222
Q ss_pred CCCC--CCCC---CCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 DPSQ--HLEK---IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ~~~~--~~~~---~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
...+ ..+. ..+..+..+|..||.+|-..||...+++++
T Consensus 285 gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 285 GDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred CCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 2111 1111 246789999999999999999999999875
No 403
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-28 Score=293.54 Aligned_cols=258 Identities=16% Similarity=0.198 Sum_probs=208.5
Q ss_pred cccccCCCccceEEEEEeeccCcEEEEEEEECC-----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEE
Q 000410 16 YYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDE-----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAF 90 (1553)
Q Consensus 16 ~~~~~l~~~~~y~~~~~LG~G~fg~V~~a~~~~-----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~ 90 (1553)
.+..++... ..++.++||.|.||.|++|+.+- ..||||.++.. ..+.....|..|+.||-+++||||+++
T Consensus 621 eFakEId~s-~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G----ytekqrrdFL~EAsIMGQFdHPNIIrL 695 (996)
T KOG0196|consen 621 EFAKEIDPS-CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG----YTEKQRRDFLSEASIMGQFDHPNIIRL 695 (996)
T ss_pred HhhhhcChh-heEEEEEEecccccceecccccCCCCcceeEEEeeeccC----ccHHHHhhhhhhhhhcccCCCCcEEEE
Confidence 344555444 47889999999999999998852 35999999654 345667789999999999999999999
Q ss_pred EEEEEeCCEEEEEecccc-CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeec
Q 000410 91 QFWQETDKAAYLLRQYFF-NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF 168 (1553)
Q Consensus 91 ~~~~~~~~~~~lV~E~~~-gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DF 168 (1553)
.++....+.++||+|||+ |+|..+|+++ +.++..+...+++.|+.|++||-+.|+|||||-..||||+++-..|++||
T Consensus 696 EGVVTks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDF 775 (996)
T KOG0196|consen 696 EGVVTKSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDF 775 (996)
T ss_pred EEEEecCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccc
Confidence 999999999999999999 8999999765 56999999999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCcceeeecCCC--CccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-C-CCCCCch
Q 000410 169 ASFKPTYIPYDDPSDFSFFFDTGGK--RLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-E-VPFFELS 244 (1553)
Q Consensus 169 G~a~~~~~~~~~~~~~~~~~~~~~g--t~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g-~~pf~~~ 244 (1553)
|+++... +++ .....+.+| ...|.|||.+ ...++|.++|+||+|++|||.++ | +|.|+.+
T Consensus 776 GLSRvle---dd~---~~~ytt~GGKIPiRWTAPEAI----------a~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS 839 (996)
T KOG0196|consen 776 GLSRVLE---DDP---EAAYTTLGGKIPIRWTAPEAI----------AYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS 839 (996)
T ss_pred cceeecc---cCC---CccccccCCccceeecChhHh----------hhcccCchhhccccceEEEEecccCCCcccccc
Confidence 9998542 222 112233333 4569999965 35689999999999999999876 6 6777776
Q ss_pred HHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 245 HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
+..-++..+.......+--.+..+.+|+..||++|-.+||.+.|++..|.
T Consensus 840 NQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lD 889 (996)
T KOG0196|consen 840 NQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLD 889 (996)
T ss_pred hHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHH
Confidence 65554433322111123334578999999999999999999999998865
No 404
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.95 E-value=7.9e-28 Score=304.71 Aligned_cols=252 Identities=17% Similarity=0.229 Sum_probs=166.9
Q ss_pred ceEEEEEeeccCcEEEEEEEECC------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEE------
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFW------ 93 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~------ 93 (1553)
+|++.+.||+|+||.||+|++.+ ..||+|.+..... .+.. + .+ .++...+.++..+...
T Consensus 133 ~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---~e~~---~-~e--~l~~~~~~~~~~~~~~~~~~~~ 203 (566)
T PLN03225 133 DFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---VEIW---M-NE--RVRRACPNSCADFVYGFLEPVS 203 (566)
T ss_pred CeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---hHHH---H-HH--HHHhhchhhHHHHHHhhhcccc
Confidence 89999999999999999999853 4699998754311 1111 1 11 1112222222222111
Q ss_pred EEeCCEEEEEecccc-CCHHHHhcCCCC--------------------CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 000410 94 QETDKAAYLLRQYFF-NSLRDRLSTPPF--------------------LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKC 152 (1553)
Q Consensus 94 ~~~~~~~~lV~E~~~-gsL~d~l~~~~~--------------------l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp 152 (1553)
...+...++|+||++ ++|++++..+.. .....+..|+.||+.||.|||++||+||||||
T Consensus 204 ~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP 283 (566)
T PLN03225 204 SKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKP 283 (566)
T ss_pred cccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCH
Confidence 245667999999999 699999875431 12334667999999999999999999999999
Q ss_pred CcEEEec-CCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCcccc------------ccCCCCC
Q 000410 153 ENVLVTS-WNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQV------------AQDAPLK 219 (1553)
Q Consensus 153 ~NILv~~-~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~------------~~~~~~t 219 (1553)
+|||++. ++.+||+|||+++...... .+......+++.|+|||.+......... .....++
T Consensus 284 ~NILl~~~~~~~KL~DFGlA~~l~~~~------~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~ 357 (566)
T PLN03225 284 QNIIFSEGSGSFKIIDLGAAADLRVGI------NYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLP 357 (566)
T ss_pred HHEEEeCCCCcEEEEeCCCcccccccc------ccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCC
Confidence 9999996 5799999999997542211 1122344578899999977533221100 0112356
Q ss_pred CcccHHHHHHHHHHHHcCCCCCCchHHHH---HHhcCCC---------CC--C------CCCCCCCHHHHHHHHHhcccC
Q 000410 220 PSMDIFAVGCVIAELFLEVPFFELSHLLA---YRRGQYD---------PS--Q------HLEKIPDSGIRKMILHMIQLE 279 (1553)
Q Consensus 220 ~~~DIwSlG~il~eLltg~~pf~~~~~~~---~~~~~~~---------~~--~------~~~~~~~~~l~~LI~~mL~~d 279 (1553)
.++||||+||++|||+++..+++...... +....++ .. . ......+....+||.+||+.|
T Consensus 358 ~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d 437 (566)
T PLN03225 358 DRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFK 437 (566)
T ss_pred CCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCC
Confidence 78899999999999999766655332111 1111110 00 0 001112334569999999999
Q ss_pred cCCCCCHHHHHHh
Q 000410 280 PELRFSAESYLQN 292 (1553)
Q Consensus 280 P~~Rpsa~elL~~ 292 (1553)
|++|||++|+|+|
T Consensus 438 P~kR~ta~e~L~H 450 (566)
T PLN03225 438 GRQRISAKAALAH 450 (566)
T ss_pred cccCCCHHHHhCC
Confidence 9999999999998
No 405
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.95 E-value=9.3e-28 Score=291.31 Aligned_cols=249 Identities=20% Similarity=0.180 Sum_probs=202.1
Q ss_pred ceEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEe-----C
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQET-----D 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~-----~ 97 (1553)
.|++.+.||.|.+|+||++++. +..+|+|+.... .+..++++.|.++|+.+ .|||++.+|++|.. +
T Consensus 20 ~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~------~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~ 93 (953)
T KOG0587|consen 20 IFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPT------EDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNG 93 (953)
T ss_pred ccEEEEEEeeccceeEEEEeeeecCceeeeEeecCC------ccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCC
Confidence 5899999999999999999875 356999998543 22344566677888876 69999999998843 4
Q ss_pred CEEEEEecccc-CCHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccc
Q 000410 98 KAAYLLRQYFF-NSLRDRLST--PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPT 174 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~~--~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~ 174 (1553)
+.+|||||||. |+.-|+++. ...+.|+.+..|++.++.||.+||.+.++|||||-.|||++.++.|||+|||.+...
T Consensus 94 DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQl 173 (953)
T KOG0587|consen 94 DQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 173 (953)
T ss_pred CeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeee
Confidence 67999999999 698888864 356899999999999999999999999999999999999999999999999988755
Q ss_pred cCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCC-CchHHHHHHhcC
Q 000410 175 YIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF-ELSHLLAYRRGQ 253 (1553)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf-~~~~~~~~~~~~ 253 (1553)
..... ...++.|||+|||||++.... .....|+..+|+||||++..||.-|.||+ +......+....
T Consensus 174 dsT~g-------rRnT~iGtP~WMAPEViac~e-----~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~Ip 241 (953)
T KOG0587|consen 174 DSTVG-------RRNTFIGTPYWMAPEVIACDE-----SPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP 241 (953)
T ss_pred ecccc-------cccCcCCCcccccceeeeccc-----CCCCCcccccchhhccceeehhcCCCCCccCcchhhhhccCC
Confidence 32221 235678999999999986432 33557888999999999999999997776 455555554444
Q ss_pred CCCCCCC--CCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 254 YDPSQHL--EKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ~~~~~~~--~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.+|++.+ ++..++.+.++|..||.+|-++||+..++|+|
T Consensus 242 RNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 242 RNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred CCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 4444433 34556789999999999999999999999998
No 406
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.95 E-value=5.2e-28 Score=279.26 Aligned_cols=244 Identities=16% Similarity=0.187 Sum_probs=199.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECCc--eEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEG--LVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~--~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+++...+||.|.||.||.+.++.. .||||.++.. ....++|.+|+.+|+.++|||+|+++++|..+-.+|||
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED------tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIi 341 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED------TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYII 341 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhhc------chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEE
Confidence 678889999999999999999873 4999988432 23345677888999999999999999999999999999
Q ss_pred ecccc-CCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 104 RQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
+|||. |+|.|||+.. ..++......++.||..|++||..+++|||||-..|.||.++..||++|||+++...-.
T Consensus 342 TEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgD--- 418 (1157)
T KOG4278|consen 342 TEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGD--- 418 (1157)
T ss_pred EecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCC---
Confidence 99999 8999999764 34788888999999999999999999999999999999999999999999999865211
Q ss_pred CCCcceee-ecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCC---chHHHHHHhcCCC
Q 000410 181 PSDFSFFF-DTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFE---LSHLLAYRRGQYD 255 (1553)
Q Consensus 181 ~~~~~~~~-~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~---~~~~~~~~~~~~~ 255 (1553)
++.. ....-..-|.|||-+. ...++.|+|||+||++|||+.| |-.||. .++...+....|.
T Consensus 419 ----TYTAHAGAKFPIKWTAPEsLA----------yNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyR 484 (1157)
T KOG4278|consen 419 ----TYTAHAGAKFPIKWTAPESLA----------YNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYR 484 (1157)
T ss_pred ----ceecccCccCcccccCccccc----------ccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhcccc
Confidence 1100 0111134599999653 4467889999999999999988 677885 4556666666665
Q ss_pred CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 256 PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 256 ~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.. -+.-.++.+.+|++.||+++|.+||++.|+-+.|+
T Consensus 485 M~--~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafE 521 (1157)
T KOG4278|consen 485 MD--GPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFE 521 (1157)
T ss_pred cc--CCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHH
Confidence 43 23445678999999999999999999999987754
No 407
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.95 E-value=3.2e-26 Score=258.37 Aligned_cols=284 Identities=18% Similarity=0.242 Sum_probs=235.3
Q ss_pred cCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeec
Q 000410 1140 SAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHI 1219 (1553)
Q Consensus 1140 ~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~ 1219 (1553)
..||+++|+.+|.+||||+.||.++||+.... ...++..|.++|.++.|...|++|++++-||++.+||..+.
T Consensus 236 kdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~-------l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g 308 (524)
T KOG0273|consen 236 KDVTSLDWNNDGTLLATGSEDGEARIWNKDGN-------LISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTG 308 (524)
T ss_pred CCcceEEecCCCCeEEEeecCcEEEEEecCch-------hhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCc
Confidence 57999999999999999999999999998753 23477889999999999999999999999999999999631
Q ss_pred ccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEEEc
Q 000410 1220 SRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTG 1299 (1553)
Q Consensus 1220 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~s 1299 (1553)
.......-+..+...+.|-.+ ..+++++.|+.|+++-+.....+.++.+ |++.|.++.|+
T Consensus 309 --------------~~~q~f~~~s~~~lDVdW~~~----~~F~ts~td~~i~V~kv~~~~P~~t~~G--H~g~V~alk~n 368 (524)
T KOG0273|consen 309 --------------TVKQQFEFHSAPALDVDWQSN----DEFATSSTDGCIHVCKVGEDRPVKTFIG--HHGEVNALKWN 368 (524)
T ss_pred --------------eEEEeeeeccCCccceEEecC----ceEeecCCCceEEEEEecCCCcceeeec--ccCceEEEEEC
Confidence 112222223333233455544 2899999999999999999999999987 99999999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEE
Q 000410 1300 PCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQ 1379 (1553)
Q Consensus 1300 p~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~ 1379 (1553)
|.|..|+++|.||++++|.+....+...++. |...|..+.| +|.+........+-.+++++.|+.|++||++.|.|..
T Consensus 369 ~tg~LLaS~SdD~TlkiWs~~~~~~~~~l~~-Hskei~t~~w-sp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~ 446 (524)
T KOG0273|consen 369 PTGSLLASCSDDGTLKIWSMGQSNSVHDLQA-HSKEIYTIKW-SPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIH 446 (524)
T ss_pred CCCceEEEecCCCeeEeeecCCCcchhhhhh-hccceeeEee-cCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeE
Confidence 9999999999999999999988888888776 6678999999 8877655555566789999999999999999999988
Q ss_pred EEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccCCCeEEEE
Q 000410 1380 VLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRW 1458 (1553)
Q Consensus 1380 ~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlW 1458 (1553)
+|-. |...|.+++|+|+| ++++|+.||.|.+|
T Consensus 447 ~f~k-----------------------------------------------H~~pVysvafS~~g~ylAsGs~dg~V~iw 479 (524)
T KOG0273|consen 447 TLMK-----------------------------------------------HQEPVYSVAFSPNGRYLASGSLDGCVHIW 479 (524)
T ss_pred eecc-----------------------------------------------CCCceEEEEecCCCcEEEecCCCCeeEec
Confidence 8742 33379999999999 67799999999999
Q ss_pred eCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeeecCCc
Q 000410 1459 DHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQR 1538 (1553)
Q Consensus 1459 Dl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~ 1538 (1553)
+.+.++.-+... -.+.|..| +|+..|.
T Consensus 480 s~~~~~l~~s~~----------------------------------------------------~~~~Ifel-~Wn~~G~ 506 (524)
T KOG0273|consen 480 STKTGKLVKSYQ----------------------------------------------------GTGGIFEL-CWNAAGD 506 (524)
T ss_pred cccchheeEeec----------------------------------------------------CCCeEEEE-EEcCCCC
Confidence 998765544332 24568999 8999998
Q ss_pred EEEEEcCCceEEEc
Q 000410 1539 LLISSSRDGAIKVW 1552 (1553)
Q Consensus 1539 ~LvSas~DG~IkVW 1552 (1553)
.|..+-.||.|.|-
T Consensus 507 kl~~~~sd~~vcvl 520 (524)
T KOG0273|consen 507 KLGACASDGSVCVL 520 (524)
T ss_pred EEEEEecCCCceEE
Confidence 88888889988874
No 408
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.95 E-value=1.5e-28 Score=254.74 Aligned_cols=253 Identities=18% Similarity=0.328 Sum_probs=191.0
Q ss_pred ccccCCCccceEEEEEeeccCcEEEEEEEE--CCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-CCCeeEEEEE
Q 000410 17 YLHDLPSSYNLVLKEVLGGSRFFKSILCKH--DEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-HPHVWAFQFW 93 (1553)
Q Consensus 17 ~~~~l~~~~~y~~~~~LG~G~fg~V~~a~~--~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-hpnIv~~~~~ 93 (1553)
+..+-+..-+|++.+++|+|.++.||.|.. .+..++||+++. --++.+.+|+.+|..+. ||||++++++
T Consensus 30 ~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKP--------VkkkKIkREikIL~nL~gg~NIi~L~Di 101 (338)
T KOG0668|consen 30 LVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKP--------VKKKKIKREIKILQNLRGGPNIIKLLDI 101 (338)
T ss_pred eeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeech--------HHHHHHHHHHHHHHhccCCCCeeehhhh
Confidence 344445555899999999999999999985 457799999842 23467889999999996 9999999999
Q ss_pred EEeC--CEEEEEeccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCC-cEEEeecC
Q 000410 94 QETD--KAAYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-WLYLSDFA 169 (1553)
Q Consensus 94 ~~~~--~~~~lV~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~-~vkL~DFG 169 (1553)
..+. +..-||+||+.. +..... +.|+.-+++.+++||+.||.|||++||.|||+||.|+||+... .++|+|+|
T Consensus 102 V~Dp~SktpaLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWG 178 (338)
T KOG0668|consen 102 VKDPESKTPSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWG 178 (338)
T ss_pred hcCccccCchhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecc
Confidence 8664 457899999996 433332 4488899999999999999999999999999999999999654 69999999
Q ss_pred ccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC-CCCCCc----h
Q 000410 170 SFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE-VPFFEL----S 244 (1553)
Q Consensus 170 ~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg-~~pf~~----~ 244 (1553)
+|... .|.. -......+..|--||.+.. -..|+..-|+|||||+++.|+.. .|+|.+ +
T Consensus 179 LAEFY-Hp~~-------eYnVRVASRyfKGPELLVd---------y~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~D 241 (338)
T KOG0668|consen 179 LAEFY-HPGK-------EYNVRVASRYFKGPELLVD---------YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD 241 (338)
T ss_pred hHhhc-CCCc-------eeeeeeehhhcCCchheee---------chhccccHHHHHHHHHHHHHHhccCcccCCCCCHH
Confidence 99754 2211 1223344667899998853 34678889999999999999998 555542 2
Q ss_pred HHHH------------HHh-cCCCCCCC--------------------CCCCCCHHHHHHHHHhcccCcCCCCCHHHHHH
Q 000410 245 HLLA------------YRR-GQYDPSQH--------------------LEKIPDSGIRKMILHMIQLEPELRFSAESYLQ 291 (1553)
Q Consensus 245 ~~~~------------~~~-~~~~~~~~--------------------~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~ 291 (1553)
++.+ |.. -.....+. -....++++.+|+.++|..|-.+|+||.|++.
T Consensus 242 QLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 242 QLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 2221 110 00000000 11133578999999999999999999999999
Q ss_pred hhhcccCCCCCCc
Q 000410 292 NYAAVVFPTYFSP 304 (1553)
Q Consensus 292 ~~~~~~fP~~f~~ 304 (1553)
| +||++
T Consensus 322 H-------pyF~~ 327 (338)
T KOG0668|consen 322 H-------PYFAP 327 (338)
T ss_pred C-------chHHH
Confidence 8 67765
No 409
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.95 E-value=1.9e-27 Score=284.89 Aligned_cols=211 Identities=19% Similarity=0.326 Sum_probs=188.0
Q ss_pred EeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCc
Q 000410 1131 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1210 (1553)
Q Consensus 1131 lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~ 1210 (1553)
...++-||.++|+++.|+|+.+||+|||.|++||+|.+.+.. +...|.+|..+|+++.|+|.|.+|||||.|++
T Consensus 443 ~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s------~~V~y~GH~~PVwdV~F~P~GyYFatas~D~t 516 (707)
T KOG0263|consen 443 TSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWS------CLVIYKGHLAPVWDVQFAPRGYYFATASHDQT 516 (707)
T ss_pred eeEEeecCCCceeeeeecccccceeeccCCcceeeeecccce------eEEEecCCCcceeeEEecCCceEEEecCCCce
Confidence 456699999999999999999999999999999999998754 67789999999999999999999999999999
Q ss_pred EEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCC
Q 000410 1211 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEE 1290 (1553)
Q Consensus 1211 I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~ 1290 (1553)
.++|..+.. ...+...+|-+-|.|+.|||+ ..++++|+.|.+|++||+.+|..++.+.+ |.
T Consensus 517 ArLWs~d~~--------------~PlRifaghlsDV~cv~FHPN---s~Y~aTGSsD~tVRlWDv~~G~~VRiF~G--H~ 577 (707)
T KOG0263|consen 517 ARLWSTDHN--------------KPLRIFAGHLSDVDCVSFHPN---SNYVATGSSDRTVRLWDVSTGNSVRIFTG--HK 577 (707)
T ss_pred eeeeecccC--------------CchhhhcccccccceEEECCc---ccccccCCCCceEEEEEcCCCcEEEEecC--CC
Confidence 999999841 112334566778899999999 67999999999999999999999999977 99
Q ss_pred cceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEE
Q 000410 1291 GYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLW 1370 (1553)
Q Consensus 1291 g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vW 1370 (1553)
++|++++|+|+|+||++|+.||.|++||+..+..+..+.. |.+.|.++.| + .+|..+++|++|+.|++|
T Consensus 578 ~~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~-Ht~ti~SlsF-S---------~dg~vLasgg~DnsV~lW 646 (707)
T KOG0263|consen 578 GPVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKG-HTGTIYSLSF-S---------RDGNVLASGGADNSVRLW 646 (707)
T ss_pred CceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhc-ccCceeEEEE-e---------cCCCEEEecCCCCeEEEE
Confidence 9999999999999999999999999999999999998876 4778888887 3 456699999999999999
Q ss_pred EcCCCcE
Q 000410 1371 NAENGSC 1377 (1553)
Q Consensus 1371 Dl~tg~~ 1377 (1553)
|+.+-.+
T Consensus 647 D~~~~~~ 653 (707)
T KOG0263|consen 647 DLTKVIE 653 (707)
T ss_pred Echhhcc
Confidence 9986443
No 410
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-28 Score=284.70 Aligned_cols=198 Identities=26% Similarity=0.277 Sum_probs=167.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHH---HHHHHHHHHHHhcCC---CCCeeEEEEEEEeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREY---ERRLFHIRETFRSID---HPHVWAFQFWQETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~---~~~l~~e~~~l~~l~---hpnIv~~~~~~~~~ 97 (1553)
+|+..+.||.|+||+|++|.|+. ..|+||.+.|...-.+.-.. .-.+--|+.||..++ |+||++++++|+++
T Consensus 562 ~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEdd 641 (772)
T KOG1152|consen 562 DYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDD 641 (772)
T ss_pred cceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecC
Confidence 79999999999999999999976 45999998876321111000 112445678888887 99999999999999
Q ss_pred CEEEEEecccc-C-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCcccccc
Q 000410 98 KAAYLLRQYFF-N-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTY 175 (1553)
Q Consensus 98 ~~~~lV~E~~~-g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~ 175 (1553)
+++||+||--+ | +|+++|..++.++|.+++.|++|++.|+++||++||+|||||-||+.++++|-+||+|||.+..+.
T Consensus 642 d~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~k 721 (772)
T KOG1152|consen 642 DYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTK 721 (772)
T ss_pred CeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhhc
Confidence 99999999888 5 999999999999999999999999999999999999999999999999999999999999886541
Q ss_pred CCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCC
Q 000410 176 IPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFF 241 (1553)
Q Consensus 176 ~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf 241 (1553)
+..|++..||..|.|||++.+..+ .+..-|||+||++||.++..+.||
T Consensus 722 ---------sgpfd~f~gtv~~aapevl~g~~y---------~gk~qdiwalgillytivykenpy 769 (772)
T KOG1152|consen 722 ---------SGPFDVFVGTVDYAAPEVLGGEKY---------LGKPQDIWALGILLYTIVYKENPY 769 (772)
T ss_pred ---------CCCcceeeeeccccchhhhCCCcc---------CCCcchhhhhhheeeEEEeccCCC
Confidence 234677788999999998865443 366779999999999999886665
No 411
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.95 E-value=1.9e-28 Score=279.69 Aligned_cols=242 Identities=24% Similarity=0.331 Sum_probs=189.0
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC------CCCeeEEEEEEEeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID------HPHVWAFQFWQETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~------hpnIv~~~~~~~~~ 97 (1553)
+|.+....|.|-|+.|.+|++.. ..||||++... +...+.=.+|.++|+.|+ --|+++|+..|...
T Consensus 433 RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN------E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hk 506 (752)
T KOG0670|consen 433 RYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN------EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHK 506 (752)
T ss_pred eeEEEeccccceeeeeeeccccCCCCeeEEEEeecc------hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhc
Confidence 68888889999999999999864 56999999654 344445557778999885 24799999999999
Q ss_pred CEEEEEeccccCCHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC-CcEEEeecCcccc
Q 000410 98 KAAYLLRQYFFNSLRDRLSTPP---FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW-NWLYLSDFASFKP 173 (1553)
Q Consensus 98 ~~~~lV~E~~~gsL~d~l~~~~---~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~-~~vkL~DFG~a~~ 173 (1553)
+++|||+|-+.-+|.+.|++-+ .|....++.++.||+.||..|-..||+|.||||+||||++. +.+||||||.|..
T Consensus 507 nHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~ 586 (752)
T KOG0670|consen 507 NHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASF 586 (752)
T ss_pred ceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCccccc
Confidence 9999999999999999998754 38889999999999999999999999999999999999975 5799999999876
Q ss_pred ccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH---HHH--
Q 000410 174 TYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH---LLA-- 248 (1553)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~---~~~-- 248 (1553)
....+ .+.| ..+..|.|||++. +.+|+...|+||+||+||||+||+..|.+.. ++.
T Consensus 587 ~~ene-----itPY----LVSRFYRaPEIiL----------G~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~ 647 (752)
T KOG0670|consen 587 ASENE-----ITPY----LVSRFYRAPEIIL----------GLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLF 647 (752)
T ss_pred ccccc-----ccHH----HHHHhccCcceee----------cCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHH
Confidence 53222 2211 1234599999876 4577888999999999999999999997542 221
Q ss_pred -----------HHhcCCC-----CCCCC-----CC----------------------------CCC------HHHHHHHH
Q 000410 249 -----------YRRGQYD-----PSQHL-----EK----------------------------IPD------SGIRKMIL 273 (1553)
Q Consensus 249 -----------~~~~~~~-----~~~~~-----~~----------------------------~~~------~~l~~LI~ 273 (1553)
++++.+. ....+ .+ .++ ..+++|+.
T Consensus 648 me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLd 727 (752)
T KOG0670|consen 648 MELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLD 727 (752)
T ss_pred HHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHH
Confidence 1111111 00000 00 001 36889999
Q ss_pred HhcccCcCCCCCHHHHHHh
Q 000410 274 HMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 274 ~mL~~dP~~Rpsa~elL~~ 292 (1553)
+||..||++|.|..++|+|
T Consensus 728 kml~LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 728 KMLILDPEKRITVNQALKH 746 (752)
T ss_pred HHhccChhhcCCHHHHhcC
Confidence 9999999999999999998
No 412
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.1e-27 Score=273.13 Aligned_cols=251 Identities=22% Similarity=0.246 Sum_probs=188.7
Q ss_pred ceEEEEEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhc--CCCCCeeEEEEEEEeCC----E
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRS--IDHPHVWAFQFWQETDK----A 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~--l~hpnIv~~~~~~~~~~----~ 99 (1553)
..++.+.||+|+||.||+|...++.||||+|.. +.++.+..|++|.+. ++|+||++|++.-+... .
T Consensus 211 pl~l~eli~~Grfg~V~KaqL~~~~VAVKifp~--------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~e 282 (534)
T KOG3653|consen 211 PLQLLELIGRGRFGCVWKAQLDNRLVAVKIFPE--------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRME 282 (534)
T ss_pred chhhHHHhhcCccceeehhhccCceeEEEecCH--------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccc
Confidence 578889999999999999999999999999943 344567777777765 57999999998765544 7
Q ss_pred EEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeecCCCCCcEEEecCCcEEEeecC
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK---------GICHGDIKCENVLVTSWNWLYLSDFA 169 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~---------gIvHrDIKp~NILv~~~~~vkL~DFG 169 (1553)
++||++|.+ |+|.++|+.+- +++.+..+|+.-+++||+|||+. .|+|||||..||||.+++...|+|||
T Consensus 283 ywLVt~fh~kGsL~dyL~~nt-isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFG 361 (534)
T KOG3653|consen 283 YWLVTEFHPKGSLCDYLKANT-ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFG 361 (534)
T ss_pred eeEEeeeccCCcHHHHHHhcc-ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccc
Confidence 999999999 89999998765 89999999999999999999972 59999999999999999999999999
Q ss_pred ccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcC--------CCCC
Q 000410 170 SFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLE--------VPFF 241 (1553)
Q Consensus 170 ~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg--------~~pf 241 (1553)
+|.... +....++. -...||..|||||++.+.-. .. ....-.++||||+|.||+||++. .|+|
T Consensus 362 LAl~~~-p~~~~~d~----~~qVGT~RYMAPEvLEgain---l~-d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Y 432 (534)
T KOG3653|consen 362 LALRLE-PGKPQGDT----HGQVGTRRYMAPEVLEGAIN---LQ-DRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEY 432 (534)
T ss_pred eeEEec-CCCCCcch----hhhhhhhhhcCHHHHhhhcc---cc-cHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcc
Confidence 997664 22222221 22568999999999865321 11 12233579999999999999874 2223
Q ss_pred C------------chHHHHHHh-cCCCC--CCCCCCC-CCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 242 E------------LSHLLAYRR-GQYDP--SQHLEKI-PDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 242 ~------------~~~~~~~~~-~~~~~--~~~~~~~-~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
. .+++..+.- .+.+| ...+.+. .-..+++.+..||+.||+.|.||.=+-+++.
T Consensus 433 qlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~ 501 (534)
T KOG3653|consen 433 QLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMA 501 (534)
T ss_pred cCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHH
Confidence 2 112222211 11111 1112221 1246899999999999999999988777644
No 413
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=8.4e-27 Score=264.18 Aligned_cols=253 Identities=21% Similarity=0.237 Sum_probs=187.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECCceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhc--CCCCCeeEEEEEEEeCC----E
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDEGLVLVKVYFKRGDYIDLREYERRLFHIRETFRS--IDHPHVWAFQFWQETDK----A 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~--l~hpnIv~~~~~~~~~~----~ 99 (1553)
++++.+.||+|+||.||+|++.++.||||+|...+ ++...+|.++.+. ++|+||+.|++.-..++ .
T Consensus 212 qI~L~e~IGkGRyGEVwrG~wrGe~VAVKiF~srd--------E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQ 283 (513)
T KOG2052|consen 212 QIVLQEIIGKGRFGEVWRGRWRGEDVAVKIFSSRD--------ERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQ 283 (513)
T ss_pred eeEEEEEecCccccceeeccccCCceEEEEecccc--------hhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEE
Confidence 78999999999999999999999999999997652 2234455566554 58999999998754443 5
Q ss_pred EEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecCCCCCcEEEecCCcEEEeecCc
Q 000410 100 AYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEK--------GICHGDIKCENVLVTSWNWLYLSDFAS 170 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~--------gIvHrDIKp~NILv~~~~~vkL~DFG~ 170 (1553)
+|||++|.+ |+|+|+|... .++.....+++.-++.||+|||.. .|.|||||..||||.++|..-|+|+|+
T Consensus 284 LwLvTdYHe~GSL~DyL~r~-tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGL 362 (513)
T KOG2052|consen 284 LWLVTDYHEHGSLYDYLNRN-TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGL 362 (513)
T ss_pred EEEeeecccCCcHHHHHhhc-cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeecee
Confidence 899999999 8999999884 599999999999999999999962 499999999999999999999999999
Q ss_pred cccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-----C-----CCC
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-----E-----VPF 240 (1553)
Q Consensus 171 a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-----g-----~~p 240 (1553)
|-...... ...........||..|||||++...-.. ....--..+||||||.|+||+.. | ++|
T Consensus 363 Av~h~~~t---~~idi~~N~rVGTKRYMAPEvLdetin~----~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~P 435 (513)
T KOG2052|consen 363 AVRHDSDT---DTIDIPPNPRVGTKRYMAPEVLDETINM----KHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLP 435 (513)
T ss_pred eEEecccC---CcccCCCCCccceeeccChHHhhhhcCh----hhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCC
Confidence 86543221 2333345667899999999998643111 01111246899999999999974 2 466
Q ss_pred CC-----chHHHHHHhcCC--CCCCCCCC--CCCH---HHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 241 FE-----LSHLLAYRRGQY--DPSQHLEK--IPDS---GIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 241 f~-----~~~~~~~~~~~~--~~~~~~~~--~~~~---~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
|. ..+...+++-.. ...+.++. ..++ .+.+|++.||..||..|.||--+-+.+.
T Consensus 436 yyd~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~ 501 (513)
T KOG2052|consen 436 YYDVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLA 501 (513)
T ss_pred cccCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHH
Confidence 63 223334433211 11122222 1223 4567899999999999999988776543
No 414
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1e-28 Score=261.30 Aligned_cols=249 Identities=24% Similarity=0.298 Sum_probs=191.6
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCC-----
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDK----- 98 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~----- 98 (1553)
+++-.+.||-|+||.||.+.+.. +.|++|.+..- ...-...+++.+|..+|..++|.||+..+++.+-..
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnv---fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFq 130 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNV---FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQ 130 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchH---HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHH
Confidence 55667899999999999998863 56999988432 222334556778888999999999999888775543
Q ss_pred EEEEEeccccCCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCC
Q 000410 99 AAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPY 178 (1553)
Q Consensus 99 ~~~lV~E~~~gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~ 178 (1553)
.+|+++|++..+|...|-....|+...++-+++||++||+|||+.||.||||||.|.||+++..+||||||+++.-....
T Consensus 131 EiYV~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~ 210 (449)
T KOG0664|consen 131 ELYVLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRD 210 (449)
T ss_pred HHHHHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhh
Confidence 47899999999999999888889999999999999999999999999999999999999999999999999998542211
Q ss_pred CCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH----H--------
Q 000410 179 DDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----L-------- 246 (1553)
Q Consensus 179 ~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~----~-------- 246 (1553)
.........|.+|+|||++++. ..|+.+.||||+|||+.||+..+-.|.... +
T Consensus 211 ------~~hMTqEVVTQYYRAPEiLMGa---------RhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLG 275 (449)
T KOG0664|consen 211 ------RLNMTHEVVTQYYRAPELLMGA---------RRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLG 275 (449)
T ss_pred ------hhhhHHHHHHHHhccHHHhhcc---------hhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhC
Confidence 1112222347789999998753 478999999999999999998888885321 1
Q ss_pred ----HHH------------HhcCCCCC-CCCCCCC-----CHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 247 ----LAY------------RRGQYDPS-QHLEKIP-----DSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 247 ----~~~------------~~~~~~~~-~~~~~~~-----~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.+ +.+...+. +.+..+. ..+...++.+||..||++|.+.++++.|
T Consensus 276 TPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~ 343 (449)
T KOG0664|consen 276 TPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQH 343 (449)
T ss_pred CCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhccc
Confidence 111 11111111 1111122 2456789999999999999999999987
No 415
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=1.9e-25 Score=236.90 Aligned_cols=296 Identities=14% Similarity=0.211 Sum_probs=226.0
Q ss_pred cEeeeccccccCeeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCcccccccccee-eecCCCceEEEEEecCCcEEEEEeC
Q 000410 1130 ILVAHLQEHCSAVNEIAISHD-HSFFVSASDDSTVKVWDSRKLEKDISFRSRLT-YHLEGSRALCTMMLRHSAQVVVGAC 1207 (1553)
Q Consensus 1130 ~lv~~l~~H~~~V~~l~~spd-~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~-~~~h~~~I~~l~f~~~~~~las~s~ 1207 (1553)
.++..+++|++.|..++|+|. |..|||||.|++||||+...+. . +.++.. -.+|...|.+++|+|.|++||+||.
T Consensus 5 ~~~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~-s--~~ck~vld~~hkrsVRsvAwsp~g~~La~aSF 81 (312)
T KOG0645|consen 5 ILEQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGD-S--WTCKTVLDDGHKRSVRSVAWSPHGRYLASASF 81 (312)
T ss_pred eeEEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCC-c--EEEEEeccccchheeeeeeecCCCcEEEEeec
Confidence 357889999999999999998 8899999999999999998532 1 222222 2368888999999999999999999
Q ss_pred CCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCC---ccccee
Q 000410 1208 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN---SNTWTL 1284 (1553)
Q Consensus 1208 DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~---~~~~~l 1284 (1553)
|+++-||.-.. +.-.+.....+|...|.+++|+++ |++|++++.|.+|-+|.+..+ ++...|
T Consensus 82 D~t~~Iw~k~~------------~efecv~~lEGHEnEVK~Vaws~s---G~~LATCSRDKSVWiWe~deddEfec~aVL 146 (312)
T KOG0645|consen 82 DATVVIWKKED------------GEFECVATLEGHENEVKCVAWSAS---GNYLATCSRDKSVWIWEIDEDDEFECIAVL 146 (312)
T ss_pred cceEEEeecCC------------CceeEEeeeeccccceeEEEEcCC---CCEEEEeeCCCeEEEEEecCCCcEEEEeee
Confidence 99999996531 111222334467889999999998 789999999999999999854 356667
Q ss_pred ccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCC---CCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEE
Q 000410 1285 KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLR---FLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVA 1361 (1553)
Q Consensus 1285 ~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr---~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~ 1361 (1553)
+. |...|.-+.|+|....|++++.|.+|++|+-. ...++.++.. +...|.++.| ++. |..++++
T Consensus 147 ~~--HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g-~~~TVW~~~F-~~~---------G~rl~s~ 213 (312)
T KOG0645|consen 147 QE--HTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDG-HENTVWSLAF-DNI---------GSRLVSC 213 (312)
T ss_pred cc--ccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecC-ccceEEEEEe-cCC---------CceEEEe
Confidence 65 88899999999999999999999999999865 2345666665 4446777777 543 4579999
Q ss_pred EcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccC
Q 000410 1362 AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1441 (1553)
Q Consensus 1362 s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~s 1441 (1553)
+.|+.|+||-.-+.- . .-|...++.+.|.
T Consensus 214 sdD~tv~Iw~~~~~~-----~----------------------------------------------~~~sr~~Y~v~W~ 242 (312)
T KOG0645|consen 214 SDDGTVSIWRLYTDL-----S----------------------------------------------GMHSRALYDVPWD 242 (312)
T ss_pred cCCcceEeeeeccCc-----c----------------------------------------------hhcccceEeeeec
Confidence 999999999865210 0 0122357888887
Q ss_pred CCCeEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccC
Q 000410 1442 PGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAG 1521 (1553)
Q Consensus 1442 p~g~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 1521 (1553)
+|.|+|||.|+.||++.-.. ++. .+.| .. ......
T Consensus 243 -~~~IaS~ggD~~i~lf~~s~--------~~d------~p~~---------------------~l---------~~~~~~ 277 (312)
T KOG0645|consen 243 -NGVIASGGGDDAIRLFKESD--------SPD------EPSW---------------------NL---------LAKKEG 277 (312)
T ss_pred -ccceEeccCCCEEEEEEecC--------CCC------CchH---------------------HH---------HHhhhc
Confidence 88999999999999997541 110 0110 00 011223
Q ss_pred CCccceeEEeeeecC-CcEEEEEcCCceEEEcC
Q 000410 1522 CHRDSILSLGSVKLN-QRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1522 ~H~d~I~~va~~~~~-~~~LvSas~DG~IkVWk 1553 (1553)
.|...|++| .|++. ...|+|||+||+|++|+
T Consensus 278 aHe~dVNsV-~w~p~~~~~L~s~~DDG~v~~W~ 309 (312)
T KOG0645|consen 278 AHEVDVNSV-QWNPKVSNRLASGGDDGIVNFWE 309 (312)
T ss_pred ccccccceE-EEcCCCCCceeecCCCceEEEEE
Confidence 599999999 79985 77899999999999995
No 416
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.94 E-value=2.3e-26 Score=261.96 Aligned_cols=234 Identities=26% Similarity=0.312 Sum_probs=187.8
Q ss_pred CcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEeccccC-CHHH
Q 000410 37 RFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFFN-SLRD 113 (1553)
Q Consensus 37 ~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~g-sL~d 113 (1553)
+||.||+|.+.+ ..+++|++...... ...+.+.+|.+.++.++|+||+++++++..+...++++||+++ +|.+
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~----~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~ 76 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIK----KKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFD 76 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccc----cHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHH
Confidence 589999999865 67999998654221 1156778888999999999999999999999999999999996 9999
Q ss_pred HhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceeeecCCC
Q 000410 114 RLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGK 193 (1553)
Q Consensus 114 ~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~g 193 (1553)
++.....++...+..++.|++.++.+||+.|++|+||+|.||+++.++.++|+|||.+....... ......+
T Consensus 77 ~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~--------~~~~~~~ 148 (244)
T smart00220 77 LLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG--------LLTTFVG 148 (244)
T ss_pred HHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeecccc--------ccccccC
Confidence 99876668999999999999999999999999999999999999999999999999987653221 1223345
Q ss_pred CccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCc-hHHHHHHhcCCCCCCC---CCCCCCHHHH
Q 000410 194 RLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFEL-SHLLAYRRGQYDPSQH---LEKIPDSGIR 269 (1553)
Q Consensus 194 t~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~-~~~~~~~~~~~~~~~~---~~~~~~~~l~ 269 (1553)
+..|+|||.+. ...++.++||||+|+++++|++|.+||.. ................ .....+..+.
T Consensus 149 ~~~~~~pE~~~----------~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (244)
T smart00220 149 TPEYMAPEVLL----------GKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWKISPEAK 218 (244)
T ss_pred CcCCCCHHHHc----------cCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCccccccCCHHHH
Confidence 77899999764 34567899999999999999999989865 3333222211111111 1111456899
Q ss_pred HHHHHhcccCcCCCCCHHHHHHh
Q 000410 270 KMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 270 ~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+++.+||..+|++||++.+++++
T Consensus 219 ~~i~~~l~~~p~~Rp~~~~~~~~ 241 (244)
T smart00220 219 DLIRKLLVKDPEKRLTAEEALQH 241 (244)
T ss_pred HHHHHHccCCchhccCHHHHhhC
Confidence 99999999999999999999986
No 417
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.94 E-value=5.2e-25 Score=260.03 Aligned_cols=346 Identities=18% Similarity=0.257 Sum_probs=262.2
Q ss_pred cEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCC
Q 000410 1130 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1209 (1553)
Q Consensus 1130 ~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG 1209 (1553)
.+..++.||-+.|++|.|+.|.++|++||.|-++|||+++..+.. ....+.+|...|..+-|..+...+++.+.||
T Consensus 136 vl~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~----~~~~l~gHkd~VvacfF~~~~~~l~tvskdG 211 (893)
T KOG0291|consen 136 VLHRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKNL----FTYALNGHKDYVVACFFGANSLDLYTVSKDG 211 (893)
T ss_pred eEeeeecCCccceeEEEeccCCceEEeccccceEEEEEecccccc----ceEeccCCCcceEEEEeccCcceEEEEecCc
Confidence 456788899999999999999999999999999999999876531 2346778999999999999999999999999
Q ss_pred cEEEEEeeecccCCCc-----------------cccccc---cccceecccCCCcEEEEEEecCCCCcceEEEEEeCCce
Q 000410 1210 IIHMFSVDHISRGLGN-----------------VEKYSG---ISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCG 1269 (1553)
Q Consensus 1210 ~I~vwdi~~~~~~~~~-----------------~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~ 1269 (1553)
.+.+|.++........ .++..+ ....+.+..+.+..|.+.+||+. .++|++|=..|.
T Consensus 212 ~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~---t~~lvvgFssG~ 288 (893)
T KOG0291|consen 212 ALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKG---TNLLVVGFSSGE 288 (893)
T ss_pred eEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCC---ceEEEEEecCCe
Confidence 9999998721100000 000000 01112333445578899999998 679999999999
Q ss_pred EEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCC-CcEEEEeCCCCcccceeeccccCCcceEEeecCCCCC
Q 000410 1270 IHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSR-GVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNA 1348 (1553)
Q Consensus 1270 I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~d-G~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~ 1348 (1553)
..++++..-.+++.+.. ....|.+++|+..|.|++.|+.. |.+-+|+.+...-+-..+. |...+.++.+ +|
T Consensus 289 f~LyelP~f~lih~LSi--s~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQg-H~~~i~~l~Y-Sp---- 360 (893)
T KOG0291|consen 289 FGLYELPDFNLIHSLSI--SDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQG-HSDRITSLAY-SP---- 360 (893)
T ss_pred eEEEecCCceEEEEeec--ccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccc-cccceeeEEE-CC----
Confidence 99999999888888876 45679999999999999999875 8999999987776655443 5567888877 55
Q ss_pred ccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCC
Q 000410 1349 AVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEP 1428 (1553)
Q Consensus 1349 ~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~ 1428 (1553)
+|.++++|+.||.|+|||..+|-|..+|..+
T Consensus 361 -----Dgq~iaTG~eDgKVKvWn~~SgfC~vTFteH-------------------------------------------- 391 (893)
T KOG0291|consen 361 -----DGQLIATGAEDGKVKVWNTQSGFCFVTFTEH-------------------------------------------- 391 (893)
T ss_pred -----CCcEEEeccCCCcEEEEeccCceEEEEeccC--------------------------------------------
Confidence 4569999999999999999999999998733
Q ss_pred CCCccCcEEeccCCCC-eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecC--CeEEEEeeecC-Ccch
Q 000410 1429 PPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSS--GVQVVQERKRQ-PLTS 1504 (1553)
Q Consensus 1429 ~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~e~~~~-~~~~ 1504 (1553)
..+|+++.|+..| .+++.+-||+||.||+.+..+=+.+..|+ +.++..-..+ |-.+....... ..-.
T Consensus 392 ---ts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~------p~QfscvavD~sGelV~AG~~d~F~Ifv 462 (893)
T KOG0291|consen 392 ---TSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPE------PIQFSCVAVDPSGELVCAGAQDSFEIFV 462 (893)
T ss_pred ---CCceEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCC------ceeeeEEEEcCCCCEEEeeccceEEEEE
Confidence 3379999999888 57799999999999999988888888764 2333333322 33333221000 0000
Q ss_pred hhhHHHHHhhhhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1505 KLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1505 ~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
+ +.......+.+.||.++|.++ +|++.+..|+|+|+|.+||+|+
T Consensus 463 W----S~qTGqllDiLsGHEgPVs~l-~f~~~~~~LaS~SWDkTVRiW~ 506 (893)
T KOG0291|consen 463 W----SVQTGQLLDILSGHEGPVSGL-SFSPDGSLLASGSWDKTVRIWD 506 (893)
T ss_pred E----EeecCeeeehhcCCCCcceee-EEccccCeEEeccccceEEEEE
Confidence 0 000111245677999999999 8999999999999999999995
No 418
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.94 E-value=4.3e-26 Score=244.57 Aligned_cols=293 Identities=20% Similarity=0.329 Sum_probs=235.9
Q ss_pred ccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--cccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEE
Q 000410 1137 EHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE--KDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMF 1214 (1553)
Q Consensus 1137 ~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~--~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vw 1214 (1553)
+.+.-+-|..|||||.|++|||-||-+.|||..++. ++..+...-.+-.+...|.|++|+.++..+|+|+.||.|+||
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvW 290 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVW 290 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEE
Confidence 345567889999999999999999999999988765 344444444556677889999999999999999999999999
Q ss_pred EeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceE
Q 000410 1215 SVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVS 1294 (1553)
Q Consensus 1215 di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~It 1294 (1553)
++.+. .++|.++..|...|+++.|+.+ +..+.+++.|.++++..+.+|++...+.+ |...|+
T Consensus 291 ri~tG-------------~ClRrFdrAHtkGvt~l~FSrD---~SqiLS~sfD~tvRiHGlKSGK~LKEfrG--HsSyvn 352 (508)
T KOG0275|consen 291 RIETG-------------QCLRRFDRAHTKGVTCLSFSRD---NSQILSASFDQTVRIHGLKSGKCLKEFRG--HSSYVN 352 (508)
T ss_pred EEecc-------------hHHHHhhhhhccCeeEEEEccC---cchhhcccccceEEEeccccchhHHHhcC--cccccc
Confidence 99852 2677777788888999999999 66899999999999999999999999987 999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeecc-ccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcC
Q 000410 1295 SLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYS-QVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAE 1373 (1553)
Q Consensus 1295 sl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~-~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~ 1373 (1553)
...|.++|+.++++++||+|++|+..+..|+.++... ...+|+.+.. .|.. -..++++...++|.|-++.
T Consensus 353 ~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~-~PKn--------peh~iVCNrsntv~imn~q 423 (508)
T KOG0275|consen 353 EATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVIL-LPKN--------PEHFIVCNRSNTVYIMNMQ 423 (508)
T ss_pred ceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEE-cCCC--------CceEEEEcCCCeEEEEecc
Confidence 9999999999999999999999999999999998864 3457777766 3432 2468888889999999987
Q ss_pred CCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccCC
Q 000410 1374 NGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTD 1452 (1553)
Q Consensus 1374 tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~D 1452 (1553)
|+..+.+......+. ..|.| ..+|.| ++.+.|.|
T Consensus 424 -GQvVrsfsSGkREgG-------------------------------------------dFi~~-~lSpkGewiYcigED 458 (508)
T KOG0275|consen 424 -GQVVRSFSSGKREGG-------------------------------------------DFINA-ILSPKGEWIYCIGED 458 (508)
T ss_pred -ceEEeeeccCCccCC-------------------------------------------ceEEE-EecCCCcEEEEEccC
Confidence 777776653221100 03444 445766 88899999
Q ss_pred CeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEee
Q 000410 1453 LKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGS 1532 (1553)
Q Consensus 1453 g~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~ 1532 (1553)
+.++.+.+.+++.-..+. -|..-|..+ .
T Consensus 459 ~vlYCF~~~sG~LE~tl~---------------------------------------------------VhEkdvIGl-~ 486 (508)
T KOG0275|consen 459 GVLYCFSVLSGKLERTLP---------------------------------------------------VHEKDVIGL-T 486 (508)
T ss_pred cEEEEEEeecCceeeeee---------------------------------------------------ccccccccc-c
Confidence 999999987665433221 155556667 4
Q ss_pred eecCCcEEEEEcCCceEEEcC
Q 000410 1533 VKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1533 ~~~~~~~LvSas~DG~IkVWk 1553 (1553)
-+|....|+|=+.||.+|+||
T Consensus 487 HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 487 HHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred cCcccchhhhhcccchhhhcC
Confidence 678889999999999999997
No 419
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=99.94 E-value=1.4e-25 Score=253.28 Aligned_cols=286 Identities=16% Similarity=0.237 Sum_probs=230.9
Q ss_pred ccccCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCC----CccccccccceeeecCC----CceEEEEEecCCcEEEEEeC
Q 000410 1137 EHCSAVNEIAISHDHS-FFVSASDDSTVKVWDSRK----LEKDISFRSRLTYHLEG----SRALCTMMLRHSAQVVVGAC 1207 (1553)
Q Consensus 1137 ~H~~~V~~l~~spd~~-~laSgS~DGtVkIWD~~~----~~~~~~~~~~~~~~~h~----~~I~~l~f~~~~~~las~s~ 1207 (1553)
+|+..|.+++|+|-.. .+++|+.|-+.++|++.. +.....+|....+.+++ ..|++++|+.+|+.||+|+.
T Consensus 176 ~~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~~q~~lrh~~~~~~~s~~~nkdVT~L~Wn~~G~~LatG~~ 255 (524)
T KOG0273|consen 176 RHESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGSTQLVLRHCIREGGKSVPSNKDVTSLDWNNDGTLLATGSE 255 (524)
T ss_pred cCCCceEEEecCchhhhhhhccCCccceeeeeehhhccccchhhhhhhhhhhhcccCCccCCcceEEecCCCCeEEEeec
Confidence 3999999999999665 999999999999999874 11112233333333322 46999999999999999999
Q ss_pred CCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccC
Q 000410 1208 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1287 (1553)
Q Consensus 1208 DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~ 1287 (1553)
||.+++|+.+. .+......|..+|..+.|+.. |.+|++++.|+++.+||..+++....+..
T Consensus 256 ~G~~riw~~~G---------------~l~~tl~~HkgPI~slKWnk~---G~yilS~~vD~ttilwd~~~g~~~q~f~~- 316 (524)
T KOG0273|consen 256 DGEARIWNKDG---------------NLISTLGQHKGPIFSLKWNKK---GTYILSGGVDGTTILWDAHTGTVKQQFEF- 316 (524)
T ss_pred CcEEEEEecCc---------------hhhhhhhccCCceEEEEEcCC---CCEEEeccCCccEEEEeccCceEEEeeee-
Confidence 99999999872 122233467888999999998 77999999999999999999998887766
Q ss_pred CCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeE
Q 000410 1288 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEV 1367 (1553)
Q Consensus 1288 ~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V 1367 (1553)
|..+-..+.|-. ..-+++.+.||.++++-+.-..|++++.+ |..+|..+.| .|. +.+++++|.|+++
T Consensus 317 -~s~~~lDVdW~~-~~~F~ts~td~~i~V~kv~~~~P~~t~~G-H~g~V~alk~-n~t---------g~LLaS~SdD~Tl 383 (524)
T KOG0273|consen 317 -HSAPALDVDWQS-NDEFATSSTDGCIHVCKVGEDRPVKTFIG-HHGEVNALKW-NPT---------GSLLASCSDDGTL 383 (524)
T ss_pred -ccCCccceEEec-CceEeecCCCceEEEEEecCCCcceeeec-ccCceEEEEE-CCC---------CceEEEecCCCee
Confidence 666656677754 35788899999999999999999999998 8889999999 554 4599999999999
Q ss_pred EEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC---
Q 000410 1368 SLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG--- 1444 (1553)
Q Consensus 1368 ~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g--- 1444 (1553)
+||......|...+..++. .|..+.|+|.|
T Consensus 384 kiWs~~~~~~~~~l~~Hsk-----------------------------------------------ei~t~~wsp~g~v~ 416 (524)
T KOG0273|consen 384 KIWSMGQSNSVHDLQAHSK-----------------------------------------------EIYTIKWSPTGPVT 416 (524)
T ss_pred EeeecCCCcchhhhhhhcc-----------------------------------------------ceeeEeecCCCCcc
Confidence 9999988777666654332 46666666644
Q ss_pred -------eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhc
Q 000410 1445 -------DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAAT 1517 (1553)
Q Consensus 1445 -------~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 1517 (1553)
.+++++.|.+|++||+..+...+.+.
T Consensus 417 ~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~----------------------------------------------- 449 (524)
T KOG0273|consen 417 SNPNMNLMLASASFDSTVKLWDVESGVPIHTLM----------------------------------------------- 449 (524)
T ss_pred CCCcCCceEEEeecCCeEEEEEccCCceeEeec-----------------------------------------------
Confidence 58899999999999998776555432
Q ss_pred CccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1518 DSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1518 ~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.|+++|.+| .|+++|++++||+.||.|.+|.
T Consensus 450 ----kH~~pVysv-afS~~g~ylAsGs~dg~V~iws 480 (524)
T KOG0273|consen 450 ----KHQEPVYSV-AFSPNGRYLASGSLDGCVHIWS 480 (524)
T ss_pred ----cCCCceEEE-EecCCCcEEEecCCCCeeEecc
Confidence 299999999 7999999999999999999994
No 420
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.94 E-value=1.5e-25 Score=265.08 Aligned_cols=298 Identities=15% Similarity=0.254 Sum_probs=239.7
Q ss_pred cCccEeeeccccccCeeEEEE-cCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEE
Q 000410 1127 PRGILVAHLQEHCSAVNEIAI-SHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVG 1205 (1553)
Q Consensus 1127 p~G~lv~~l~~H~~~V~~l~~-spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~ 1205 (1553)
..++++.++-|..+.|.+++| .|+.+++|.|++.+.+|++++.+.. ...+.+|...|.++.....|..|++|
T Consensus 311 ~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~-------c~ii~GH~e~vlSL~~~~~g~llat~ 383 (775)
T KOG0319|consen 311 DELTIVKQIVGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSY-------CQIIPGHTEAVLSLDVWSSGDLLATG 383 (775)
T ss_pred cccEEehhhcCCchhheeeeecCCccceEEEEeCCCceEEEecCCCc-------eEEEeCchhheeeeeecccCcEEEEe
Confidence 347788999999999999998 5677899999999999999988765 23788999999999966677899999
Q ss_pred eCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccc---
Q 000410 1206 ACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTW--- 1282 (1553)
Q Consensus 1206 s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~--- 1282 (1553)
|.|.++++|+++... ... .+......|...|.+++++..+.+ .+++++.|+++++|+++..+...
T Consensus 384 sKD~svilWr~~~~~---------~~~-~~~a~~~gH~~svgava~~~~~as--ffvsvS~D~tlK~W~l~~s~~~~~~~ 451 (775)
T KOG0319|consen 384 SKDKSVILWRLNNNC---------SKS-LCVAQANGHTNSVGAVAGSKLGAS--FFVSVSQDCTLKLWDLPKSKETAFPI 451 (775)
T ss_pred cCCceEEEEEecCCc---------chh-hhhhhhcccccccceeeecccCcc--EEEEecCCceEEEecCCCcccccccc
Confidence 999999999995211 111 112223356677788888777544 99999999999999998722111
Q ss_pred ee----ccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEE
Q 000410 1283 TL----KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLI 1358 (1553)
Q Consensus 1283 ~l----~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l 1358 (1553)
.+ ....|...|+|++++|+...+++||.|.+.++|++.....+..+.. |..++.++.| +|.. ..+
T Consensus 452 ~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsG-H~RGvw~V~F-s~~d---------q~l 520 (775)
T KOG0319|consen 452 VLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSG-HTRGVWCVSF-SKND---------QLL 520 (775)
T ss_pred eehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeC-CccceEEEEe-cccc---------cee
Confidence 11 1224788899999999999999999999999999996666666665 7788999988 5543 489
Q ss_pred EEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEe
Q 000410 1359 YVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1438 (1553)
Q Consensus 1359 ~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl 1438 (1553)
+++|+|.+|+||.++++.|.++|.++.. .|--+
T Consensus 521 aT~SgD~TvKIW~is~fSClkT~eGH~~-----------------------------------------------aVlra 553 (775)
T KOG0319|consen 521 ATCSGDKTVKIWSISTFSCLKTFEGHTS-----------------------------------------------AVLRA 553 (775)
T ss_pred EeccCCceEEEEEeccceeeeeecCccc-----------------------------------------------eeEee
Confidence 9999999999999999999999975443 45555
Q ss_pred ccCCCC-eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhc
Q 000410 1439 LPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAAT 1517 (1553)
Q Consensus 1439 ~~sp~g-~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 1517 (1553)
.|-.+| +|++||.||-|++|++++.++...+-
T Consensus 554 ~F~~~~~qliS~~adGliKlWnikt~eC~~tlD----------------------------------------------- 586 (775)
T KOG0319|consen 554 SFIRNGKQLISAGADGLIKLWNIKTNECEMTLD----------------------------------------------- 586 (775)
T ss_pred eeeeCCcEEEeccCCCcEEEEeccchhhhhhhh-----------------------------------------------
Confidence 555555 89999999999999999877654222
Q ss_pred CccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1518 DSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1518 ~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.|.|.|+++ ..++...|++||+.||.|.+|+
T Consensus 587 ----~H~DrvWaL-~~~~~~~~~~tgg~Dg~i~~wk 617 (775)
T KOG0319|consen 587 ----AHNDRVWAL-SVSPLLDMFVTGGGDGRIIFWK 617 (775)
T ss_pred ----hccceeEEE-eecCccceeEecCCCeEEEEee
Confidence 399999999 6788888999999999999997
No 421
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.94 E-value=2e-25 Score=239.12 Aligned_cols=303 Identities=15% Similarity=0.181 Sum_probs=232.2
Q ss_pred eeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc---------ccc---ccccceeeecCCCceEEEEEecCC
Q 000410 1132 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE---------KDI---SFRSRLTYHLEGSRALCTMMLRHS 1199 (1553)
Q Consensus 1132 v~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~---------~~~---~~~~~~~~~~h~~~I~~l~f~~~~ 1199 (1553)
-..+..|++++.+-+|+|||.++||||.|-.|||.|+.++- .+. .-....++..|...|+++.|+|..
T Consensus 105 t~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre 184 (430)
T KOG0640|consen 105 TKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRE 184 (430)
T ss_pred eEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchh
Confidence 35788999999999999999999999999999999998421 000 011234666788899999999999
Q ss_pred cEEEEEeCCCcEEEEEeeecccCCCccccccccccceec-ccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCC
Q 000410 1200 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKK-DTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN 1278 (1553)
Q Consensus 1200 ~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~ 1278 (1553)
+.|++|+.|++|++||+.... ..+.+ ...+-..|.++.|+|. |.+|+.|+....+++||+.|-
T Consensus 185 ~ILiS~srD~tvKlFDfsK~s-------------aKrA~K~~qd~~~vrsiSfHPs---GefllvgTdHp~~rlYdv~T~ 248 (430)
T KOG0640|consen 185 TILISGSRDNTVKLFDFSKTS-------------AKRAFKVFQDTEPVRSISFHPS---GEFLLVGTDHPTLRLYDVNTY 248 (430)
T ss_pred heEEeccCCCeEEEEecccHH-------------HHHHHHHhhccceeeeEeecCC---CceEEEecCCCceeEEeccce
Confidence 999999999999999996211 11111 1234568899999998 889999999999999999998
Q ss_pred cccce-eccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccC-CcceEEeecCCCCCccccCCCC
Q 000410 1279 SNTWT-LKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVC-PIEKMCLFVPPPNAAVSTTARP 1356 (1553)
Q Consensus 1279 ~~~~~-l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~-~I~~l~~~~p~~~~~~~s~~~~ 1356 (1553)
+|-.. .+...|.+.|+++.+++.|+..++|+.||.|++||--...|+.++...|.+ .|.+..| .-+|+
T Consensus 249 QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~F----------tkn~k 318 (430)
T KOG0640|consen 249 QCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVF----------TKNGK 318 (430)
T ss_pred eEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEE----------ccCCe
Confidence 87532 344568999999999999999999999999999999999999999877665 4555555 44678
Q ss_pred EEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcE
Q 000410 1357 LIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIR 1436 (1553)
Q Consensus 1357 ~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~ 1436 (1553)
++++.+.|..|++|++.+|.++..+.+....+... --+
T Consensus 319 yiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~------------------------------------------~rt 356 (430)
T KOG0640|consen 319 YILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQK------------------------------------------HRT 356 (430)
T ss_pred EEeecCCcceeeeeeecCCceEEEEecCCcccchh------------------------------------------hhh
Confidence 99999999999999999999999998543211100 001
Q ss_pred EeccCCC-CeEE-EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhh
Q 000410 1437 SLLPLPG-GDLL-TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAA 1514 (1553)
Q Consensus 1437 sl~~sp~-g~ll-Tgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~ 1514 (1553)
...|+.. .+++ ---..+.+.-||-++..+...++
T Consensus 357 qAvFNhtEdyVl~pDEas~slcsWdaRtadr~~l~s-------------------------------------------- 392 (430)
T KOG0640|consen 357 QAVFNHTEDYVLFPDEASNSLCSWDARTADRVALLS-------------------------------------------- 392 (430)
T ss_pred hhhhcCccceEEccccccCceeeccccchhhhhhcc--------------------------------------------
Confidence 1112222 2333 33446778899987665433221
Q ss_pred hhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1515 AATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1515 ~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
-+|.+.+..+ .-+|.++.+.|||.|-.+++|.
T Consensus 393 ------lgHn~a~R~i-~HSP~~p~FmTcsdD~raRFWy 424 (430)
T KOG0640|consen 393 ------LGHNGAVRWI-VHSPVEPAFMTCSDDFRARFWY 424 (430)
T ss_pred ------cCCCCCceEE-EeCCCCCceeeecccceeeeee
Confidence 2499999999 6788899999999999999995
No 422
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.94 E-value=1.2e-26 Score=277.09 Aligned_cols=249 Identities=17% Similarity=0.131 Sum_probs=199.1
Q ss_pred ceEEEEEeeccCcEEEEEEEEC-C-----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-E-----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~-~-----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~ 99 (1553)
..+..++||+|+||+||+|.+- + -+||+|++..... .+...++.+|+-+|.+++|||++++++++....
T Consensus 697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~----~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~- 771 (1177)
T KOG1025|consen 697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS----PKASIELLDEALRMASLDHPNLLRLLGVCMLST- 771 (1177)
T ss_pred hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCC----chhhHHHHHHHHHHhcCCCchHHHHhhhcccch-
Confidence 4566789999999999999872 2 3599999876522 233456778888999999999999999998766
Q ss_pred EEEEecccc-CCHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 100 AYLLRQYFF-NSLRDRLST-PPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 100 ~~lV~E~~~-gsL~d~l~~-~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
..||++|++ |+|.|+++. +..+...+.+.|..||++|+.|||+++++||||-..||||.+-+.+|+.|||+++.....
T Consensus 772 ~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d 851 (1177)
T KOG1025|consen 772 LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD 851 (1177)
T ss_pred HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence 889999999 899999975 466999999999999999999999999999999999999999999999999999865322
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchHHHHHHhcCCCC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSHLLAYRRGQYDP 256 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~~~~~~~~~~~~ 256 (1553)
+..+......-.+.|||=|.+. ...|+.++||||+||++||++| |..|+..-....+..-....
T Consensus 852 -----~~ey~~~~gK~pikwmale~i~----------~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~g 916 (1177)
T KOG1025|consen 852 -----EKEYSAPGGKVPIKWMALESIR----------IRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKG 916 (1177)
T ss_pred -----cccccccccccCcHHHHHHHhh----------ccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhcc
Confidence 2223333333455688888654 5689999999999999999998 67777655544443221111
Q ss_pred -CCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 257 -SQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 257 -~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
.-..+.+.+.++.-++.+||..|++.||+++++...+.
T Consensus 917 eRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs 955 (1177)
T KOG1025|consen 917 ERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFS 955 (1177)
T ss_pred ccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHH
Confidence 12345677789999999999999999999999998865
No 423
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.94 E-value=2.2e-26 Score=315.54 Aligned_cols=236 Identities=17% Similarity=0.198 Sum_probs=178.6
Q ss_pred eEEEEEeeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
+...+.||+|+||.||+|++. +..||+|.+...... . ..|++.+++++||||+++++++.++...|+||
T Consensus 692 ~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~-~--------~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~ 762 (968)
T PLN00113 692 LKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI-P--------SSEIADMGKLQHPNIVKLIGLCRSEKGAYLIH 762 (968)
T ss_pred CCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc-c--------HHHHHHHhhCCCCCcceEEEEEEcCCCCEEEE
Confidence 455678999999999999974 467999988543211 1 12357788999999999999999999999999
Q ss_pred cccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCC
Q 000410 105 QYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCH---EKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDD 180 (1553)
Q Consensus 105 E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH---~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~ 180 (1553)
||++ |+|.+++.. +++.++..|+.|++.||+||| +.+|+||||||+||+++.++..++. ||.......
T Consensus 763 Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~---- 834 (968)
T PLN00113 763 EYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT---- 834 (968)
T ss_pred eCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ecccccccc----
Confidence 9999 699999963 789999999999999999999 6799999999999999998887775 654432210
Q ss_pred CCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch-----HHHHHHhcCCC
Q 000410 181 PSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS-----HLLAYRRGQYD 255 (1553)
Q Consensus 181 ~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~-----~~~~~~~~~~~ 255 (1553)
.....+++.|+|||.+. ...++.++||||+||++|||++|++||+.. ....+.+..+.
T Consensus 835 -------~~~~~~t~~y~aPE~~~----------~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 897 (968)
T PLN00113 835 -------DTKCFISSAYVAPETRE----------TKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYS 897 (968)
T ss_pred -------CCCccccccccCccccc----------CCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcC
Confidence 01224678899999654 346889999999999999999999998532 11221111110
Q ss_pred C-------CCCCCC---C---CCHHHHHHHHHhcccCcCCCCCHHHHHHhhhcc
Q 000410 256 P-------SQHLEK---I---PDSGIRKMILHMIQLEPELRFSAESYLQNYAAV 296 (1553)
Q Consensus 256 ~-------~~~~~~---~---~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~~ 296 (1553)
. .+.+.. . ...++.+++.+||+.||++||+++|+++.++..
T Consensus 898 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 898 DCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred ccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 0 011100 0 112567899999999999999999999987643
No 424
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=99.94 E-value=1.3e-25 Score=269.20 Aligned_cols=260 Identities=20% Similarity=0.240 Sum_probs=218.7
Q ss_pred cEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc-------------------------cccccccceeee
Q 000410 1130 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE-------------------------KDISFRSRLTYH 1184 (1553)
Q Consensus 1130 ~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~-------------------------~~~~~~~~~~~~ 1184 (1553)
.+..+++--...|+|..|++|+..+|.|-.|..|++|.+.... .........++.
T Consensus 369 ic~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~~~l~~~d~~sad~~~~~~D~~~~~~~~~L~ 448 (707)
T KOG0263|consen 369 ICMYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDASDLSNIDTESADVDVDMLDDDSSGTSRTLY 448 (707)
T ss_pred EEEEEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhhccccchhhhccccccccchhhhhccccCCceeEEee
Confidence 3666666555789999999999999999999999999987210 000111234578
Q ss_pred cCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEE
Q 000410 1185 LEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYS 1264 (1553)
Q Consensus 1185 ~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~ 1264 (1553)
+|+++|..+.|+|+.+.|++||.|++||+|.+++- .......+|-.+|+.+.|+|. |-++++|
T Consensus 449 GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~--------------s~~V~y~GH~~PVwdV~F~P~---GyYFata 511 (707)
T KOG0263|consen 449 GHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTW--------------SCLVIYKGHLAPVWDVQFAPR---GYYFATA 511 (707)
T ss_pred cCCCceeeeeecccccceeeccCCcceeeeecccc--------------eeEEEecCCCcceeeEEecCC---ceEEEec
Confidence 99999999999999999999999999999999841 222233378889999999999 6699999
Q ss_pred eCCceEEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecC
Q 000410 1265 TQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVP 1344 (1553)
Q Consensus 1265 s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p 1344 (1553)
+.|++-++|........+.+.+ |.+.|.|+.|+|+++++++||+|.+|++||..++..++.+.. |.++|..+++ +|
T Consensus 512 s~D~tArLWs~d~~~PlRifag--hlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~G-H~~~V~al~~-Sp 587 (707)
T KOG0263|consen 512 SHDQTARLWSTDHNKPLRIFAG--HLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTG-HKGPVTALAF-SP 587 (707)
T ss_pred CCCceeeeeecccCCchhhhcc--cccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecC-CCCceEEEEE-cC
Confidence 9999999999998888888876 999999999999999999999999999999999999999976 8889999988 54
Q ss_pred CCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccc
Q 000410 1345 PPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDE 1424 (1553)
Q Consensus 1345 ~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 1424 (1553)
+|+++++|+.||.|.+||+.+|..+..+..
T Consensus 588 ---------~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~----------------------------------------- 617 (707)
T KOG0263|consen 588 ---------CGRYLASGDEDGLIKIWDLANGSLVKQLKG----------------------------------------- 617 (707)
T ss_pred ---------CCceEeecccCCcEEEEEcCCCcchhhhhc-----------------------------------------
Confidence 577999999999999999999876655543
Q ss_pred cCCCCCCccCcEEeccCCCC-eEEEccCCCeEEEEeCCCCCCc
Q 000410 1425 LNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRS 1466 (1553)
Q Consensus 1425 l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWDl~~~~~s 1466 (1553)
|...|.++.|+.+| .|++||.|..|++||+......
T Consensus 618 ------Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~~~~~~ 654 (707)
T KOG0263|consen 618 ------HTGTIYSLSFSRDGNVLASGGADNSVRLWDLTKVIEL 654 (707)
T ss_pred ------ccCceeEEEEecCCCEEEecCCCCeEEEEEchhhccc
Confidence 23368999999998 6679999999999999866544
No 425
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.94 E-value=1.7e-25 Score=276.10 Aligned_cols=258 Identities=17% Similarity=0.148 Sum_probs=172.3
Q ss_pred ceEEEEEeeccCcEEEEEEEE------------------CCceEEEEEEeccCCCcCHHHHH----------HHHHHHHH
Q 000410 26 NLVLKEVLGGSRFFKSILCKH------------------DEGLVLVKVYFKRGDYIDLREYE----------RRLFHIRE 77 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~------------------~~~~vavKv~~~~~~~~~~~~~~----------~~l~~e~~ 77 (1553)
+|.+.++||+|+||.||+|.. .+..||||.+....... .+++. +....|..
T Consensus 146 ~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~-~~~fl~e~~~~~~~~e~~~vE~~ 224 (507)
T PLN03224 146 DFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGV-RQDFLKTGTLAKGSAETGMVEAY 224 (507)
T ss_pred CceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhh-HHHHHhhhhhhhcccchhHHHHH
Confidence 899999999999999999964 12459999985432110 11111 11223445
Q ss_pred HHhcCCCCC-----eeEEEEEEEe--------CCEEEEEecccc-CCHHHHhcCC------------------------C
Q 000410 78 TFRSIDHPH-----VWAFQFWQET--------DKAAYLLRQYFF-NSLRDRLSTP------------------------P 119 (1553)
Q Consensus 78 ~l~~l~hpn-----Iv~~~~~~~~--------~~~~~lV~E~~~-gsL~d~l~~~------------------------~ 119 (1553)
++..++|.+ ++++++++.. ....|||+||++ ++|.+++... .
T Consensus 225 ~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~ 304 (507)
T PLN03224 225 MCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQD 304 (507)
T ss_pred HHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccc
Confidence 556665554 3566666542 346899999999 6998888532 1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCcceeeecCCCCccccC
Q 000410 120 FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRLCYLA 199 (1553)
Q Consensus 120 ~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 199 (1553)
.+++..++.++.|++.||.|||++||+||||||+|||++.++.+||+|||++........ . ......+++.|+|
T Consensus 305 ~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~----~--~~~~g~~tp~Y~a 378 (507)
T PLN03224 305 KRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN----F--NPLYGMLDPRYSP 378 (507)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCc----c--CccccCCCcceeC
Confidence 235667888999999999999999999999999999999999999999999864321110 0 1112234788999
Q ss_pred cchhcccCCcccc------------ccCCCCCCcccHHHHHHHHHHHHcCC-CCCCchHHH------------HH---Hh
Q 000410 200 PERFYEHGGEMQV------------AQDAPLKPSMDIFAVGCVIAELFLEV-PFFELSHLL------------AY---RR 251 (1553)
Q Consensus 200 PE~~~~~~~~~~~------------~~~~~~t~~~DIwSlG~il~eLltg~-~pf~~~~~~------------~~---~~ 251 (1553)
||.+......... ........+.||||+||++|+|+++. .||...... .+ ..
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~ 458 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKG 458 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcc
Confidence 9988632211000 00011223579999999999999984 466421111 11 11
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHhcccCc---CCCCCHHHHHHh
Q 000410 252 GQYDPSQHLEKIPDSGIRKMILHMIQLEP---ELRFSAESYLQN 292 (1553)
Q Consensus 252 ~~~~~~~~~~~~~~~~l~~LI~~mL~~dP---~~Rpsa~elL~~ 292 (1553)
..+.. ......++..++|+.+||..+| .+|+|++|+|+|
T Consensus 459 ~~~~~--~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 459 QKYDF--SLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred cCCCc--ccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 11111 1122345789999999999876 689999999999
No 426
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=99.94 E-value=8.5e-25 Score=233.94 Aligned_cols=260 Identities=18% Similarity=0.262 Sum_probs=216.4
Q ss_pred Ccc-cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEE
Q 000410 1124 GWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV 1202 (1553)
Q Consensus 1124 ~W~-p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~l 1202 (1553)
.|+ ..++-++.+.--..+|-.++|+|.|.++|.|+-|+.+.|+++...+.....+....+.+|.+.+.|+.|.+ ..+|
T Consensus 81 vWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~d-D~~i 159 (343)
T KOG0286|consen 81 VWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLD-DNHI 159 (343)
T ss_pred EEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcC-CCce
Confidence 476 33455666666778999999999999999999999999999996644444455567889999999999987 5678
Q ss_pred EEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccc
Q 000410 1203 VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTW 1282 (1553)
Q Consensus 1203 as~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~ 1282 (1553)
+++|.|.+.-+||+++.. ......+|..-|..+.+.|.. ++.+++|+-|+.-++||+|.+.+++
T Consensus 160 lT~SGD~TCalWDie~g~--------------~~~~f~GH~gDV~slsl~p~~--~ntFvSg~cD~~aklWD~R~~~c~q 223 (343)
T KOG0286|consen 160 LTGSGDMTCALWDIETGQ--------------QTQVFHGHTGDVMSLSLSPSD--GNTFVSGGCDKSAKLWDVRSGQCVQ 223 (343)
T ss_pred EecCCCceEEEEEcccce--------------EEEEecCCcccEEEEecCCCC--CCeEEecccccceeeeeccCcceeE
Confidence 899999999999998522 122233566677888999952 7799999999999999999999999
Q ss_pred eeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccc-cCCcceEEeecCCCCCccccCCCCEEEEE
Q 000410 1283 TLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQ-VCPIEKMCLFVPPPNAAVSTTARPLIYVA 1361 (1553)
Q Consensus 1283 ~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~-~~~I~~l~~~~p~~~~~~~s~~~~~l~s~ 1361 (1553)
+|.+ |...|++++|.|+|.-+++|+.|++.++||+|....+..+++.. ..+|+++.| +..|+++++|
T Consensus 224 tF~g--hesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~F----------S~SGRlLfag 291 (343)
T KOG0286|consen 224 TFEG--HESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAF----------SKSGRLLFAG 291 (343)
T ss_pred eecc--cccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEE----------cccccEEEee
Confidence 9977 99999999999999999999999999999999988888887543 346666666 4457899999
Q ss_pred EcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccC
Q 000410 1362 AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1441 (1553)
Q Consensus 1362 s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~s 1441 (1553)
..|..+.+||.-+++...++.+ |...|.|+..+
T Consensus 292 y~d~~c~vWDtlk~e~vg~L~G-----------------------------------------------HeNRvScl~~s 324 (343)
T KOG0286|consen 292 YDDFTCNVWDTLKGERVGVLAG-----------------------------------------------HENRVSCLGVS 324 (343)
T ss_pred ecCCceeEeeccccceEEEeec-----------------------------------------------cCCeeEEEEEC
Confidence 9999999999998887777653 33479999999
Q ss_pred CCC-eEEEccCCCeEEEEe
Q 000410 1442 PGG-DLLTGGTDLKIRRWD 1459 (1553)
Q Consensus 1442 p~g-~llTgg~Dg~IrlWD 1459 (1553)
||| .+.||++|..+|+|.
T Consensus 325 ~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 325 PDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred CCCcEEEecchhHheeecC
Confidence 999 566999999999994
No 427
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.7e-25 Score=255.56 Aligned_cols=135 Identities=20% Similarity=0.196 Sum_probs=113.1
Q ss_pred cccCCCccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCC-----CC---Ce
Q 000410 18 LHDLPSSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSID-----HP---HV 87 (1553)
Q Consensus 18 ~~~l~~~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~-----hp---nI 87 (1553)
..|+....+|.+.++||-|.|++||+|.+.. +.||+||.+. .+.|.+.-..|+++|+++. |+ +|
T Consensus 71 IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS------AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~V 144 (590)
T KOG1290|consen 71 IGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS------AQHYTEAALDEIKLLQQVREGDPNDPGKKCV 144 (590)
T ss_pred ccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh------hhHHHHHHHHHHHHHHHHHhcCCCCCCCcee
Confidence 3444444589999999999999999999975 5699999853 3566677777888888762 33 59
Q ss_pred eEEEEEEEe----CCEEEEEeccccCCHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEe
Q 000410 88 WAFQFWQET----DKAAYLLRQYFFNSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHE-KGICHGDIKCENVLVT 158 (1553)
Q Consensus 88 v~~~~~~~~----~~~~~lV~E~~~gsL~d~l~~~--~~l~~~~~~~i~~Qll~aL~~LH~-~gIvHrDIKp~NILv~ 158 (1553)
|++++.|.. ..+++||+|+++.+|..+|... ..++...++.|++|||.||.|||. .||||-||||||||+.
T Consensus 145 V~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 145 VQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred eeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence 999999854 5689999999999999999654 349999999999999999999997 6999999999999994
No 428
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=8.5e-27 Score=247.78 Aligned_cols=247 Identities=17% Similarity=0.140 Sum_probs=187.4
Q ss_pred ccCCCccceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEE-EE
Q 000410 19 HDLPSSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQF-WQ 94 (1553)
Q Consensus 19 ~~l~~~~~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~-~~ 94 (1553)
.++.+ .|.+.+.||.|.||++.+|+|++ ..+|+|.+.++. ...+.+.+|...--.| .|.||+.-|+ .|
T Consensus 20 v~l~d--~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~------tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaF 91 (378)
T KOG1345|consen 20 VDLED--VYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQ------TTQADFVREFHYSFFLSPHQHIIDTYEVAF 91 (378)
T ss_pred cchhh--hhhHHHHhcccceeeEEeeeccCCceEEEeeccCcch------hhHHHHHHHhccceeeccchhhhHHHHHHh
Confidence 44444 68889999999999999999986 559999987652 2234455554433233 5899998665 56
Q ss_pred EeCCEEEEEecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC--CcEEEeecCcc
Q 000410 95 ETDKAAYLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW--NWLYLSDFASF 171 (1553)
Q Consensus 95 ~~~~~~~lV~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~--~~vkL~DFG~a 171 (1553)
++.+.+++++||++ |+|..-+...+ +.+...+.++.|+++||.|||++++||||||.+||||-.. .+|||||||..
T Consensus 92 qt~d~YvF~qE~aP~gdL~snv~~~G-igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t 170 (378)
T KOG1345|consen 92 QTSDAYVFVQEFAPRGDLRSNVEAAG-IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLT 170 (378)
T ss_pred hcCceEEEeeccCccchhhhhcCccc-ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccc
Confidence 88889999999999 89999988766 8899999999999999999999999999999999999643 48999999988
Q ss_pred ccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCch-------
Q 000410 172 KPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS------- 244 (1553)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~------- 244 (1553)
.+...... .......|.|||...... .......+.+|||.||+++|.+++|.+||...
T Consensus 171 ~k~g~tV~----------~~~~~~~y~~pe~~~~~~-----ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y 235 (378)
T KOG1345|consen 171 RKVGTTVK----------YLEYVNNYHAPELCDTVV-----NEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPY 235 (378)
T ss_pred cccCceeh----------hhhhhcccCCcHHHhhcc-----ccceEecccccchheeeeeeeeecCCCcchhhhccCchH
Confidence 76532211 111234599999775332 22345688999999999999999999999632
Q ss_pred -HHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHH
Q 000410 245 -HLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESY 289 (1553)
Q Consensus 245 -~~~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~el 289 (1553)
...++..+.....+......++.+..+.++-|..+|++|--..+.
T Consensus 236 ~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~ 281 (378)
T KOG1345|consen 236 WEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFKDRCKIWTA 281 (378)
T ss_pred HHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCcccccchhHHH
Confidence 234455554444444445567789999999999999999444333
No 429
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.93 E-value=3.4e-26 Score=234.59 Aligned_cols=218 Identities=19% Similarity=0.173 Sum_probs=165.3
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHH-HhcCCCCCeeEEEEEEEeCCEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRET-FRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~-l~~l~hpnIv~~~~~~~~~~~~~l 102 (1553)
+..-+..||+|++|.|-+.+|.. ...|+|.+...- ..++. +++..|..+ ++...+|.++.||+.+......++
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tv---n~q~q-~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwI 122 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATV---NSQEQ-KRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWI 122 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhc---ChHHH-HHHHHhhhhhccCCCCCeEEEeehhhhccccEEE
Confidence 34456789999999999998853 568999886552 22333 344445454 444579999999999999999999
Q ss_pred EeccccCCHHHH----hcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCcEEEecCCcEEEeecCccccccCC
Q 000410 103 LRQYFFNSLRDR----LSTPPFLSLVEKKWLAFQLLLAVKQCHEK-GICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 103 V~E~~~gsL~d~----l~~~~~l~~~~~~~i~~Qll~aL~~LH~~-gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~ 177 (1553)
.||.|..+|..+ +.+.+.++|.-+-+|+.-+++||.|||++ .|+|||+||.||||+.+|+||+||||.+......
T Consensus 123 cME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS 202 (282)
T KOG0984|consen 123 CMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS 202 (282)
T ss_pred eHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhh
Confidence 999999887554 45667799999999999999999999985 8999999999999999999999999987654211
Q ss_pred CCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCc--hHHHHHHhcCCC
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFEL--SHLLAYRRGQYD 255 (1553)
Q Consensus 178 ~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~--~~~~~~~~~~~~ 255 (1553)
- .... ..|-..|||||++.... ....|+-++||||||+++.||.+++.||+. ....++++....
T Consensus 203 i------Akt~--daGCkpYmaPEri~~e~------n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 203 I------AKTM--DAGCKPYMAPERINPEL------NQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred h------HHHH--hcCCCccCChhhcCccc------CcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 1 1111 23446699999986432 234799999999999999999999999863 344445554444
Q ss_pred CCCCCC
Q 000410 256 PSQHLE 261 (1553)
Q Consensus 256 ~~~~~~ 261 (1553)
+.+.++
T Consensus 269 p~P~Lp 274 (282)
T KOG0984|consen 269 PSPQLP 274 (282)
T ss_pred CCCCCc
Confidence 444443
No 430
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.93 E-value=1.4e-24 Score=256.38 Aligned_cols=276 Identities=16% Similarity=0.225 Sum_probs=210.1
Q ss_pred EeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCc
Q 000410 1131 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1210 (1553)
Q Consensus 1131 lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~ 1210 (1553)
.|-..+||...++++++||||.++|||++||.|||||..++- +..|+..|++.|+.++|...++.++++|-||+
T Consensus 342 YVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~Sgf------C~vTFteHts~Vt~v~f~~~g~~llssSLDGt 415 (893)
T KOG0291|consen 342 YVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGF------CFVTFTEHTSGVTAVQFTARGNVLLSSSLDGT 415 (893)
T ss_pred eeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCce------EEEEeccCCCceEEEEEEecCCEEEEeecCCe
Confidence 356678999999999999999999999999999999998875 67789999999999999999999999999999
Q ss_pred EEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCc-eEEEEeCCCCcccceeccCCC
Q 000410 1211 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNC-GIHLWDTRSNSNTWTLKAIPE 1289 (1553)
Q Consensus 1211 I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg-~I~iwDlrt~~~~~~l~~~~h 1289 (1553)
|+.||+.. | ...|.+.........|++.+|. |.++.+|+.|. .|.+|++.||+.+-.+.+ |
T Consensus 416 VRAwDlkR----------Y---rNfRTft~P~p~QfscvavD~s---GelV~AG~~d~F~IfvWS~qTGqllDiLsG--H 477 (893)
T KOG0291|consen 416 VRAWDLKR----------Y---RNFRTFTSPEPIQFSCVAVDPS---GELVCAGAQDSFEIFVWSVQTGQLLDILSG--H 477 (893)
T ss_pred EEeeeecc----------c---ceeeeecCCCceeeeEEEEcCC---CCEEEeeccceEEEEEEEeecCeeeehhcC--C
Confidence 99999962 1 2344455555556678888887 77888888887 599999999999999977 9
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-cccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEE
Q 000410 1290 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL-VPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1368 (1553)
Q Consensus 1290 ~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~-~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~ 1368 (1553)
.|+|.+++|+|++..|++||.|.+|++||+-.. ..+..++.. ..+.. +.++|+|..++++.-||.|.
T Consensus 478 EgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~vEtl~i~--sdvl~----------vsfrPdG~elaVaTldgqIt 545 (893)
T KOG0291|consen 478 EGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGTVETLEIR--SDVLA----------VSFRPDGKELAVATLDGQIT 545 (893)
T ss_pred CCcceeeEEccccCeEEeccccceEEEEEeeccCceeeeEeec--cceeE----------EEEcCCCCeEEEEEecceEE
Confidence 999999999999999999999999999997432 122222221 12333 44566778999999999999
Q ss_pred EEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEE
Q 000410 1369 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL 1447 (1553)
Q Consensus 1369 vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~ll 1447 (1553)
+||++.+.....+.+...... .+...+.+. ..........+++++++|| .|+
T Consensus 546 f~d~~~~~q~~~IdgrkD~~~-----------------------gR~~~D~~t----a~~sa~~K~Ftti~ySaDG~~Il 598 (893)
T KOG0291|consen 546 FFDIKEAVQVGSIDGRKDLSG-----------------------GRKETDRIT----AENSAKGKTFTTICYSADGKCIL 598 (893)
T ss_pred EEEhhhceeeccccchhhccc-----------------------cccccceee----hhhcccCCceEEEEEcCCCCEEE
Confidence 999987654433332111000 000000000 0111223368999999999 677
Q ss_pred EccCCCeEEEEeCCCCCCceEE
Q 000410 1448 TGGTDLKIRRWDHCSPGRSYCI 1469 (1553)
Q Consensus 1448 Tgg~Dg~IrlWDl~~~~~s~~~ 1469 (1553)
+||..+.|+++|+.++-..+.+
T Consensus 599 AgG~sn~iCiY~v~~~vllkkf 620 (893)
T KOG0291|consen 599 AGGESNSICIYDVPEGVLLKKF 620 (893)
T ss_pred ecCCcccEEEEECchhheeeeE
Confidence 9999999999999876554433
No 431
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=99.93 E-value=7.4e-25 Score=239.08 Aligned_cols=262 Identities=21% Similarity=0.279 Sum_probs=216.0
Q ss_pred CCcc-cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcE
Q 000410 1123 SGWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1201 (1553)
Q Consensus 1123 ~~W~-p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~ 1201 (1553)
..|+ ..|+|..++.||...|..++||+-+.|+.+|+.|+.||.||+...+ ....|.+|-..|.|++.+|.-+.
T Consensus 176 kIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nk------vIR~YhGHlS~V~~L~lhPTldv 249 (460)
T KOG0285|consen 176 KIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNK------VIRHYHGHLSGVYCLDLHPTLDV 249 (460)
T ss_pred EEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhh------hHHHhccccceeEEEecccccee
Confidence 4699 5699999999999999999999999999999999999999998765 45578999999999999999999
Q ss_pred EEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCccc
Q 000410 1202 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1281 (1553)
Q Consensus 1202 las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~ 1281 (1553)
|++|+.|.+++|||+++.. ......+|...|..+.+.|. ...+++|+.|++|++||++.|+..
T Consensus 250 l~t~grDst~RvWDiRtr~--------------~V~~l~GH~~~V~~V~~~~~---dpqvit~S~D~tvrlWDl~agkt~ 312 (460)
T KOG0285|consen 250 LVTGGRDSTIRVWDIRTRA--------------SVHVLSGHTNPVASVMCQPT---DPQVITGSHDSTVRLWDLRAGKTM 312 (460)
T ss_pred EEecCCcceEEEeeecccc--------------eEEEecCCCCcceeEEeecC---CCceEEecCCceEEEeeeccCcee
Confidence 9999999999999998521 12233467778888888877 458999999999999999999999
Q ss_pred ceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEE
Q 000410 1282 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVA 1361 (1553)
Q Consensus 1282 ~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~ 1361 (1553)
.++.+ |...|.+++.+|....+++++.| .++.|++-.+..+..+.. +..-|+.+.. .. ...+++|
T Consensus 313 ~tlt~--hkksvral~lhP~e~~fASas~d-nik~w~~p~g~f~~nlsg-h~~iintl~~-ns----------D~v~~~G 377 (460)
T KOG0285|consen 313 ITLTH--HKKSVRALCLHPKENLFASASPD-NIKQWKLPEGEFLQNLSG-HNAIINTLSV-NS----------DGVLVSG 377 (460)
T ss_pred Eeeec--ccceeeEEecCCchhhhhccCCc-cceeccCCccchhhcccc-ccceeeeeee-cc----------CceEEEc
Confidence 99987 88899999999999999999988 589999998888877543 5666777765 22 2368888
Q ss_pred EcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccC
Q 000410 1362 AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1441 (1553)
Q Consensus 1362 s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~s 1441 (1553)
+.+|.+.+||.++|.+-+.+.....++. -....+|.+.+|.
T Consensus 378 ~dng~~~fwdwksg~nyQ~~~t~vqpGS---------------------------------------l~sEagI~as~fD 418 (460)
T KOG0285|consen 378 GDNGSIMFWDWKSGHNYQRGQTIVQPGS---------------------------------------LESEAGIFASCFD 418 (460)
T ss_pred CCceEEEEEecCcCcccccccccccCCc---------------------------------------cccccceeEEeec
Confidence 8899999999999977655532221110 1123489999998
Q ss_pred CCC-eEEEccCCCeEEEEeCC
Q 000410 1442 PGG-DLLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1442 p~g-~llTgg~Dg~IrlWDl~ 1461 (1553)
..| +|+||+.|.+|++|.-.
T Consensus 419 ktg~rlit~eadKtIk~~keD 439 (460)
T KOG0285|consen 419 KTGSRLITGEADKTIKMYKED 439 (460)
T ss_pred ccCceEEeccCCcceEEEecc
Confidence 877 89999999999999854
No 432
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.93 E-value=2.3e-23 Score=238.02 Aligned_cols=368 Identities=15% Similarity=0.138 Sum_probs=251.1
Q ss_pred ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCC
Q 000410 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD 1208 (1553)
Q Consensus 1129 G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~D 1208 (1553)
-+...++.+|..=|+|+.|+|||.+|||+|.||++.|+|-.++++...+.. -.+|.+.|.++.|+|++..|+++|.|
T Consensus 180 FKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~---~~aHkGsIfalsWsPDs~~~~T~SaD 256 (603)
T KOG0318|consen 180 FKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELED---SDAHKGSIFALSWSPDSTQFLTVSAD 256 (603)
T ss_pred eeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecC---CCCccccEEEEEECCCCceEEEecCC
Confidence 456678899999999999999999999999999999999999886544432 35799999999999999999999999
Q ss_pred CcEEEEEeeecccCCCccccccccccceecccC---CCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceec
Q 000410 1209 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTK---EGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLK 1285 (1553)
Q Consensus 1209 G~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~ 1285 (1553)
.+++|||+.+.+ .++.+... +...+-|+ |-.+ .|++.+-+|.|..++...+.....+.
T Consensus 257 kt~KIWdVs~~s-------------lv~t~~~~~~v~dqqvG~l-Wqkd-----~lItVSl~G~in~ln~~d~~~~~~i~ 317 (603)
T KOG0318|consen 257 KTIKIWDVSTNS-------------LVSTWPMGSTVEDQQVGCL-WQKD-----HLITVSLSGTINYLNPSDPSVLKVIS 317 (603)
T ss_pred ceEEEEEeeccc-------------eEEEeecCCchhceEEEEE-EeCC-----eEEEEEcCcEEEEecccCCChhheec
Confidence 999999997411 22222222 23345554 4443 89999999999999999999888887
Q ss_pred cCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCC
Q 000410 1286 AIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN 1365 (1553)
Q Consensus 1286 ~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg 1365 (1553)
+ |...|+++..+|++.+|++|+.||.|.-||...+..-+-....|...|.++.. +.. ..+++.+.|.
T Consensus 318 G--HnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~-~~~----------~~~~t~g~Dd 384 (603)
T KOG0318|consen 318 G--HNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAA-SES----------GELFTIGWDD 384 (603)
T ss_pred c--cccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEee-cCC----------CcEEEEecCC
Confidence 6 99999999999999999999999999999999887765554556677888766 221 2488999999
Q ss_pred eEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccc--ccccc-ccccCCC--CCCccCcEEecc
Q 000410 1366 EVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNV--NQKYR-VDELNEP--PPRLLGIRSLLP 1440 (1553)
Q Consensus 1366 ~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--~~~~~-~~~l~~~--~~~~~~V~sl~~ 1440 (1553)
.+++.++..+.+...... .+.. +|.............. ..++. +...... ........++++
T Consensus 385 ~l~~~~~~~~~~t~~~~~----------~lg~---QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv 451 (603)
T KOG0318|consen 385 TLRVISLKDNGYTKSEVV----------KLGS---QPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAV 451 (603)
T ss_pred eEEEEecccCccccccee----------ecCC---CceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEE
Confidence 999999875443221100 0000 1111000000000000 00111 0111100 011224678899
Q ss_pred CCCC-eEEEccCCCeEEEEeCCCCCCceE-EeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcc-hhhhHHHHHhhhhc
Q 000410 1441 LPGG-DLLTGGTDLKIRRWDHCSPGRSYC-ICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLT-SKLTAKAVLAAAAT 1517 (1553)
Q Consensus 1441 sp~g-~llTgg~Dg~IrlWDl~~~~~s~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~~~~~~~~~~~~~~ 1517 (1553)
+|++ .++.||.|++|+++.+...+.... +.-. +.+..++...+.++..+......+... .+...+. ...
T Consensus 452 ~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~----h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~----~~~ 523 (603)
T KOG0318|consen 452 SPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLE----HRAAITDVAYSPDGAYLAAGDASRKVVLYDVASRE----VKT 523 (603)
T ss_pred cCCCCEEEEecccceEEEEEecCCcccceeeeec----ccCCceEEEECCCCcEEEEeccCCcEEEEEcccCc----eec
Confidence 9998 566999999999999987654222 2211 224556666666666555432221110 0000000 012
Q ss_pred CccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1518 DSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1518 ~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
....-|+..|++| +|+|+..++||||-|-.|.||.
T Consensus 524 ~~w~FHtakI~~~-aWsP~n~~vATGSlDt~Viiys 558 (603)
T KOG0318|consen 524 NRWAFHTAKINCV-AWSPNNKLVATGSLDTNVIIYS 558 (603)
T ss_pred ceeeeeeeeEEEE-EeCCCceEEEeccccceEEEEE
Confidence 2334599999999 7999999999999999999994
No 433
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.93 E-value=6.1e-25 Score=281.20 Aligned_cols=248 Identities=18% Similarity=0.231 Sum_probs=195.8
Q ss_pred ceEEEEEeeccCcEEEEEEEECC---------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE---------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQE 95 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~---------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~ 95 (1553)
+.++.+.||+|.||+|++|...+ ..||||.+..... ....+.+..|.++|+.+ .||||+.+.+++.
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~----~~~~~~~~~El~~m~~~g~H~niv~llG~~t 372 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS----SSEKKDLMSELNVLKELGKHPNIVNLLGACT 372 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccC----cHHHHHHHHHHHHHHHhcCCcchhhheeeec
Confidence 34667799999999999997531 2499998865422 24455677788888888 5999999999998
Q ss_pred eCCEEEEEecccc-CCHHHHhcCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEe
Q 000410 96 TDKAAYLLRQYFF-NSLRDRLSTPP----------------FLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVT 158 (1553)
Q Consensus 96 ~~~~~~lV~E~~~-gsL~d~l~~~~----------------~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~ 158 (1553)
.+...++|+||+. |+|.++++.+. .++..+...+++||+.|++||++.+++||||-..|||++
T Consensus 373 ~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~ 452 (609)
T KOG0200|consen 373 QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLIT 452 (609)
T ss_pred cCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEec
Confidence 8999999999999 89999997654 488999999999999999999999999999999999999
Q ss_pred cCCcEEEeecCccccccCCCCCCCCcceeeecCCCCc--cccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc
Q 000410 159 SWNWLYLSDFASFKPTYIPYDDPSDFSFFFDTGGKRL--CYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL 236 (1553)
Q Consensus 159 ~~~~vkL~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~--~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt 236 (1553)
.+..+||+|||+++...... .+......++. .|||||.+. ...|+.++||||+|++|||+++
T Consensus 453 ~~~~~kIaDFGlar~~~~~~------~y~~~~~~~~LP~kWmApEsl~----------~~~ft~kSDVWSfGI~L~Eifs 516 (609)
T KOG0200|consen 453 KNKVIKIADFGLARDHYNKD------YYRTKSSAGTLPVKWMAPESLF----------DRVFTSKSDVWSFGILLWEIFT 516 (609)
T ss_pred CCCEEEEccccceeccCCCC------ceEecCCCCccceeecCHHHhc----------cCcccccchhhHHHHHHHHHhh
Confidence 99999999999998542111 11112222223 499999764 3578999999999999999998
Q ss_pred -CCCCCCc----hHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhhhc
Q 000410 237 -EVPFFEL----SHLLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYAA 295 (1553)
Q Consensus 237 -g~~pf~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~~~ 295 (1553)
|..||.. ..+.++.+..+.. ..+...++++.++++.||+.+|++||++.++.+.+..
T Consensus 517 LG~~PYp~~~~~~~l~~~l~~G~r~--~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~ 578 (609)
T KOG0200|consen 517 LGGTPYPGIPPTEELLEFLKEGNRM--EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEK 578 (609)
T ss_pred CCCCCCCCCCcHHHHHHHHhcCCCC--CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHH
Confidence 4888874 2333333332222 2344557899999999999999999999999987543
No 434
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=4e-24 Score=221.92 Aligned_cols=249 Identities=18% Similarity=0.262 Sum_probs=202.1
Q ss_pred eeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcE
Q 000410 1132 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGII 1211 (1553)
Q Consensus 1132 v~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I 1211 (1553)
...|..|.++|..+.|+-||+|.+||+.|.|||+|+..++. ...+|.+|+..|.+++.+.+...|++|+.|..|
T Consensus 10 ~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~------liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v 83 (307)
T KOG0316|consen 10 LSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGA------LIKTYSGHGHEVLDAALSSDNSKFASCGGDKAV 83 (307)
T ss_pred ceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccc------eeeeecCCCceeeeccccccccccccCCCCceE
Confidence 56788999999999999999999999999999999998876 567999999999999999999999999999999
Q ss_pred EEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCC--cccceeccCCC
Q 000410 1212 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN--SNTWTLKAIPE 1289 (1553)
Q Consensus 1212 ~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~--~~~~~l~~~~h 1289 (1553)
.+||+.+.. ..|+ ...|...|+.+.|+.+ ..++++|+.|.++++||.|+. +.++.+.. .
T Consensus 84 ~vwDV~TGk-------------v~Rr-~rgH~aqVNtV~fNee---sSVv~SgsfD~s~r~wDCRS~s~ePiQilde--a 144 (307)
T KOG0316|consen 84 QVWDVNTGK-------------VDRR-FRGHLAQVNTVRFNEE---SSVVASGSFDSSVRLWDCRSRSFEPIQILDE--A 144 (307)
T ss_pred EEEEcccCe-------------eeee-cccccceeeEEEecCc---ceEEEeccccceeEEEEcccCCCCccchhhh--h
Confidence 999998521 2222 3367888999999988 569999999999999999976 45666654 5
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEE
Q 000410 1290 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSL 1369 (1553)
Q Consensus 1290 ~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~v 1369 (1553)
.+.|.|+.+. +.-++.|+.||+++.||+|.+......- ..||+++++ +++ ++..++++-|+.+++
T Consensus 145 ~D~V~Si~v~--~heIvaGS~DGtvRtydiR~G~l~sDy~---g~pit~vs~-s~d---------~nc~La~~l~stlrL 209 (307)
T KOG0316|consen 145 KDGVSSIDVA--EHEIVAGSVDGTVRTYDIRKGTLSSDYF---GHPITSVSF-SKD---------GNCSLASSLDSTLRL 209 (307)
T ss_pred cCceeEEEec--ccEEEeeccCCcEEEEEeecceeehhhc---CCcceeEEe-cCC---------CCEEEEeeccceeee
Confidence 6779999886 4579999999999999999987765543 348888888 554 557889999999999
Q ss_pred EEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCCeEEEc
Q 000410 1370 WNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTG 1449 (1553)
Q Consensus 1370 WDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~llTg 1449 (1553)
.|-++|+.++.+.++.. ..| .+.|..-..+..+++|
T Consensus 210 lDk~tGklL~sYkGhkn-------------------------------~ey-------------kldc~l~qsdthV~sg 245 (307)
T KOG0316|consen 210 LDKETGKLLKSYKGHKN-------------------------------MEY-------------KLDCCLNQSDTHVFSG 245 (307)
T ss_pred cccchhHHHHHhccccc-------------------------------cee-------------eeeeeecccceeEEec
Confidence 99999998877764432 011 1233332234478899
Q ss_pred cCCCeEEEEeCCCCC
Q 000410 1450 GTDLKIRRWDHCSPG 1464 (1553)
Q Consensus 1450 g~Dg~IrlWDl~~~~ 1464 (1553)
+.||.|.+||+.+..
T Consensus 246 SEDG~Vy~wdLvd~~ 260 (307)
T KOG0316|consen 246 SEDGKVYFWDLVDET 260 (307)
T ss_pred cCCceEEEEEeccce
Confidence 999999999997643
No 435
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=99.92 E-value=7.9e-24 Score=224.62 Aligned_cols=255 Identities=17% Similarity=0.223 Sum_probs=200.5
Q ss_pred cEeeec-cccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCC
Q 000410 1130 ILVAHL-QEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD 1208 (1553)
Q Consensus 1130 ~lv~~l-~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~D 1208 (1553)
.+..+| .+|+.+|.+++|+|.|++||+||.|.|+-||.-..++ +.+..++.+|...|.|++|+++|++||+||.|
T Consensus 51 ~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~~~e----fecv~~lEGHEnEVK~Vaws~sG~~LATCSRD 126 (312)
T KOG0645|consen 51 TCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKEDGE----FECVATLEGHENEVKCVAWSASGNYLATCSRD 126 (312)
T ss_pred EEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecCCCc----eeEEeeeeccccceeEEEEcCCCCEEEEeeCC
Confidence 466666 4799999999999999999999999999999866543 55777899999999999999999999999999
Q ss_pred CcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCC---cccceec
Q 000410 1209 GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN---SNTWTLK 1285 (1553)
Q Consensus 1209 G~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~---~~~~~l~ 1285 (1553)
.+|.||.++. . ..-.+......|..-|..+.|||. ..+|++++.|++|++|+-..+ .+..++.
T Consensus 127 KSVWiWe~de-d----------dEfec~aVL~~HtqDVK~V~WHPt---~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~ 192 (312)
T KOG0645|consen 127 KSVWIWEIDE-D----------DEFECIAVLQEHTQDVKHVIWHPT---EDLLFSCSYDNTIKVYRDEDDDDWECVQTLD 192 (312)
T ss_pred CeEEEEEecC-C----------CcEEEEeeeccccccccEEEEcCC---cceeEEeccCCeEEEEeecCCCCeeEEEEec
Confidence 9999999972 1 111233344567777888999997 569999999999999987732 4567776
Q ss_pred cCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCC
Q 000410 1286 AIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN 1365 (1553)
Q Consensus 1286 ~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg 1365 (1553)
+ |.+.|.+++|++.|..|++++.|+++++|-++ ..+...+..++..+.|. . ..|+++++|+
T Consensus 193 g--~~~TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~-----~~~~~~~sr~~Y~v~W~--~----------~~IaS~ggD~ 253 (312)
T KOG0645|consen 193 G--HENTVWSLAFDNIGSRLVSCSDDGTVSIWRLY-----TDLSGMHSRALYDVPWD--N----------GVIASGGGDD 253 (312)
T ss_pred C--ccceEEEEEecCCCceEEEecCCcceEeeeec-----cCcchhcccceEeeeec--c----------cceEeccCCC
Confidence 5 88899999999999999999999999999876 34555566778888772 1 2689999999
Q ss_pred eEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCC--C
Q 000410 1366 EVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP--G 1443 (1553)
Q Consensus 1366 ~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp--~ 1443 (1553)
.|+++.-..+ +.++..+. ..+....|...|+++.|.| .
T Consensus 254 ~i~lf~~s~~-----------~d~p~~~l-----------------------------~~~~~~aHe~dVNsV~w~p~~~ 293 (312)
T KOG0645|consen 254 AIRLFKESDS-----------PDEPSWNL-----------------------------LAKKEGAHEVDVNSVQWNPKVS 293 (312)
T ss_pred EEEEEEecCC-----------CCCchHHH-----------------------------HHhhhcccccccceEEEcCCCC
Confidence 9999875521 00110000 0011234555899999999 4
Q ss_pred CeEEEccCCCeEEEEeCC
Q 000410 1444 GDLLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1444 g~llTgg~Dg~IrlWDl~ 1461 (1553)
++|++||+||.|++|.+.
T Consensus 294 ~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 294 NRLASGGDDGIVNFWELE 311 (312)
T ss_pred CceeecCCCceEEEEEec
Confidence 589999999999999874
No 436
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.92 E-value=2.8e-24 Score=236.13 Aligned_cols=254 Identities=18% Similarity=0.274 Sum_probs=217.8
Q ss_pred Ccc-cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEE
Q 000410 1124 GWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV 1202 (1553)
Q Consensus 1124 ~W~-p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~l 1202 (1553)
-|+ -.|++++.|+||.++|..|+|+..|+++||||.|-.+++||..+. +++.....+|...|.+++|.|.|+++
T Consensus 134 v~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl~~~LWd~~~~-----~~c~ks~~gh~h~vS~V~f~P~gd~i 208 (406)
T KOG0295|consen 134 VFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDLSAKLWDFDTF-----FRCIKSLIGHEHGVSSVFFLPLGDHI 208 (406)
T ss_pred EEEccchhhhhhhhccccceeEEEEecCccEEEecCCccchhheeHHHH-----HHHHHHhcCcccceeeEEEEecCCee
Confidence 577 569999999999999999999999999999999999999998753 24556677888889999999999999
Q ss_pred EEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccc
Q 000410 1203 VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTW 1282 (1553)
Q Consensus 1203 as~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~ 1282 (1553)
++|+.|.+|+.|++++. -.......|...|.++..+.+ |.+++++++|.+|++|-+.+++|..
T Consensus 209 lS~srD~tik~We~~tg--------------~cv~t~~~h~ewvr~v~v~~D---Gti~As~s~dqtl~vW~~~t~~~k~ 271 (406)
T KOG0295|consen 209 LSCSRDNTIKAWECDTG--------------YCVKTFPGHSEWVRMVRVNQD---GTIIASCSNDQTLRVWVVATKQCKA 271 (406)
T ss_pred eecccccceeEEecccc--------------eeEEeccCchHhEEEEEecCC---eeEEEecCCCceEEEEEeccchhhh
Confidence 99999999999999841 122334466778999888888 8899999999999999999999988
Q ss_pred eeccCCCCcceEEEEEcCC----------C-----CEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCC
Q 000410 1283 TLKAIPEEGYVSSLVTGPC----------G-----NWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPN 1347 (1553)
Q Consensus 1283 ~l~~~~h~g~Itsl~~sp~----------g-----~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~ 1347 (1553)
.+.. |..+|-|++|.|. + .++.+|+.|++|++||+.++.++-++.. |...|..+.+ +|.
T Consensus 272 ~lR~--hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~g-hdnwVr~~af-~p~-- 345 (406)
T KOG0295|consen 272 ELRE--HEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVG-HDNWVRGVAF-SPG-- 345 (406)
T ss_pred hhhc--cccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEec-ccceeeeeEE-cCC--
Confidence 8877 7888999999663 2 4899999999999999999999998876 6778888877 554
Q ss_pred CccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCC
Q 000410 1348 AAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNE 1427 (1553)
Q Consensus 1348 ~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~ 1427 (1553)
|++++++..|+++++||+.+++|..++..
T Consensus 346 -------Gkyi~ScaDDktlrvwdl~~~~cmk~~~a-------------------------------------------- 374 (406)
T KOG0295|consen 346 -------GKYILSCADDKTLRVWDLKNLQCMKTLEA-------------------------------------------- 374 (406)
T ss_pred -------CeEEEEEecCCcEEEEEeccceeeeccCC--------------------------------------------
Confidence 56999999999999999999999887652
Q ss_pred CCCCccCcEEeccCCCC-eEEEccCCCeEEEEe
Q 000410 1428 PPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWD 1459 (1553)
Q Consensus 1428 ~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWD 1459 (1553)
|...|+++.|+.+. +++||+-|.++++|.
T Consensus 375 ---h~hfvt~lDfh~~~p~VvTGsVdqt~KvwE 404 (406)
T KOG0295|consen 375 ---HEHFVTSLDFHKTAPYVVTGSVDQTVKVWE 404 (406)
T ss_pred ---CcceeEEEecCCCCceEEeccccceeeeee
Confidence 23368899987665 788999999999996
No 437
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.92 E-value=1.3e-23 Score=231.94 Aligned_cols=282 Identities=18% Similarity=0.234 Sum_probs=217.3
Q ss_pred cccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCC---cEEEEEeCCCcEEEE
Q 000410 1138 HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS---AQVVVGACDGIIHMF 1214 (1553)
Q Consensus 1138 H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~---~~las~s~DG~I~vw 1214 (1553)
|.+.|.++... +++++||+.||+++|||.... +..++.+|+++|.+++|.-.. ..|++||.|.++++|
T Consensus 104 hdDWVSsv~~~--~~~IltgsYDg~~riWd~~Gk-------~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw 174 (423)
T KOG0313|consen 104 HDDWVSSVKGA--SKWILTGSYDGTSRIWDLKGK-------SIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLW 174 (423)
T ss_pred chhhhhhhccc--CceEEEeecCCeeEEEecCCc-------eEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEE
Confidence 88889999887 789999999999999998642 567899999999988886432 359999999999999
Q ss_pred EeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCC-----------------
Q 000410 1215 SVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRS----------------- 1277 (1553)
Q Consensus 1215 di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt----------------- 1277 (1553)
.++... ..... .....+|...|.++...++ +..+++|+.|.+|.+|+..+
T Consensus 175 ~~~~~~---------~~~~~-~~~~~GHk~~V~sVsv~~s---gtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~ 241 (423)
T KOG0313|consen 175 KWNVGE---------NKVKA-LKVCRGHKRSVDSVSVDSS---GTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQ 241 (423)
T ss_pred EecCch---------hhhhH-HhHhcccccceeEEEecCC---CCeEEeecccceeeecccCCCccccccccchhhhhhh
Confidence 997311 01111 1112278888999988887 77999999999999999321
Q ss_pred --------CcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCc
Q 000410 1278 --------NSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAA 1349 (1553)
Q Consensus 1278 --------~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~ 1349 (1553)
+..+-++. +|.++|.++.|++ ...+++++.|.+|+.||+.++..+..... ..++.++.. +|.
T Consensus 242 ~~~~~~~~r~P~vtl~--GHt~~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~--~ksl~~i~~-~~~---- 311 (423)
T KOG0313|consen 242 KREKEGGTRTPLVTLE--GHTEPVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTT--NKSLNCISY-SPL---- 311 (423)
T ss_pred hhhhcccccCceEEec--ccccceeeEEEcC-CCceEeecccceEEEEEeecccceeeeec--CcceeEeec-ccc----
Confidence 11223344 4999999999998 67899999999999999999988877654 345677766 543
Q ss_pred cccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCC
Q 000410 1350 VSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPP 1429 (1553)
Q Consensus 1350 ~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~ 1429 (1553)
..++++|+.|..+++||-+++.-..+-. ...
T Consensus 312 -----~~Ll~~gssdr~irl~DPR~~~gs~v~~--------------------------------------------s~~ 342 (423)
T KOG0313|consen 312 -----SKLLASGSSDRHIRLWDPRTGDGSVVSQ--------------------------------------------SLI 342 (423)
T ss_pred -----cceeeecCCCCceeecCCCCCCCceeEE--------------------------------------------eee
Confidence 4589999999999999998774221111 013
Q ss_pred CCccCcEEeccCCCC--eEEEccCCCeEEEEeCCCCC-CceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhh
Q 000410 1430 PRLLGIRSLLPLPGG--DLLTGGTDLKIRRWDHCSPG-RSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKL 1506 (1553)
Q Consensus 1430 ~~~~~V~sl~~sp~g--~llTgg~Dg~IrlWDl~~~~-~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 1506 (1553)
+|...|.++.|+|.. .+++|+.|+++++||+++.+ ..+.+.
T Consensus 343 gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~------------------------------------ 386 (423)
T KOG0313|consen 343 GHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIA------------------------------------ 386 (423)
T ss_pred cchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeec------------------------------------
Confidence 455689999999977 57799999999999998776 333222
Q ss_pred hHHHHHhhhhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1507 TAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1507 ~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
+|.|.|.++ .|+ .+..|||||.|..|+|++
T Consensus 387 ---------------~h~DKvl~v-dW~-~~~~IvSGGaD~~l~i~~ 416 (423)
T KOG0313|consen 387 ---------------GHNDKVLSV-DWN-EGGLIVSGGADNKLRIFK 416 (423)
T ss_pred ---------------cCCceEEEE-ecc-CCceEEeccCcceEEEec
Confidence 299999999 564 356899999999999985
No 438
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=99.92 E-value=6.4e-25 Score=238.01 Aligned_cols=263 Identities=18% Similarity=0.191 Sum_probs=210.3
Q ss_pred CCCcccC-ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCc
Q 000410 1122 DSGWRPR-GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1200 (1553)
Q Consensus 1122 ~~~W~p~-G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~ 1200 (1553)
-+.|+-. -.++..|.||+++|.|+.| |.+.++|||.|.||+|||+++++ +..++-+|...|..+.|+. .
T Consensus 219 ikiWD~n~~~c~~~L~GHtGSVLCLqy--d~rviisGSSDsTvrvWDv~tge------~l~tlihHceaVLhlrf~n--g 288 (499)
T KOG0281|consen 219 IKIWDKNSLECLKILTGHTGSVLCLQY--DERVIVSGSSDSTVRVWDVNTGE------PLNTLIHHCEAVLHLRFSN--G 288 (499)
T ss_pred eEEeccccHHHHHhhhcCCCcEEeeec--cceEEEecCCCceEEEEeccCCc------hhhHHhhhcceeEEEEEeC--C
Confidence 3578844 4678999999999999999 46799999999999999999987 5667888998999999964 5
Q ss_pred EEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcc
Q 000410 1201 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1280 (1553)
Q Consensus 1201 ~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~ 1280 (1553)
.++++|.|.+|.|||+... ....++....+|.+.|+++.|+.. ++++++.|.+|++||+.|+++
T Consensus 289 ~mvtcSkDrsiaVWdm~sp-----------s~it~rrVLvGHrAaVNvVdfd~k-----yIVsASgDRTikvW~~st~ef 352 (499)
T KOG0281|consen 289 YMVTCSKDRSIAVWDMASP-----------TDITLRRVLVGHRAAVNVVDFDDK-----YIVSASGDRTIKVWSTSTCEF 352 (499)
T ss_pred EEEEecCCceeEEEeccCc-----------hHHHHHHHHhhhhhheeeeccccc-----eEEEecCCceEEEEeccceee
Confidence 8999999999999999731 123566677789999999988754 999999999999999999999
Q ss_pred cceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEE
Q 000410 1281 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYV 1360 (1553)
Q Consensus 1281 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s 1360 (1553)
+.++.+ |...|-|+.+ .|+.+++|++|.+|++||+..+.+++.++. |..-|.++.| +.+.+++
T Consensus 353 vRtl~g--HkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeG-HEeLvRciRF------------d~krIVS 415 (499)
T KOG0281|consen 353 VRTLNG--HKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEG-HEELVRCIRF------------DNKRIVS 415 (499)
T ss_pred ehhhhc--ccccceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhc-hHHhhhheee------------cCceeee
Confidence 999976 8888988887 478999999999999999999999999886 5667888888 3457999
Q ss_pred EEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEecc
Q 000410 1361 AAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLP 1440 (1553)
Q Consensus 1361 ~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~ 1440 (1553)
|+.||.|+|||+.++.-..... +.+-+..+ ..|.+.|..+.|
T Consensus 416 GaYDGkikvWdl~aaldpra~~-----------------------------------~~~Cl~~l---v~hsgRVFrLQF 457 (499)
T KOG0281|consen 416 GAYDGKIKVWDLQAALDPRAPA-----------------------------------STLCLRTL---VEHSGRVFRLQF 457 (499)
T ss_pred ccccceEEEEecccccCCcccc-----------------------------------cchHHHhh---hhccceeEEEee
Confidence 9999999999998664211110 00001111 112234666666
Q ss_pred CCCCeEEEccCCCeEEEEeCCCCCCc
Q 000410 1441 LPGGDLLTGGTDLKIRRWDHCSPGRS 1466 (1553)
Q Consensus 1441 sp~g~llTgg~Dg~IrlWDl~~~~~s 1466 (1553)
. +-.|++++-|.+|-+||+.++-.+
T Consensus 458 D-~fqIvsssHddtILiWdFl~~~~~ 482 (499)
T KOG0281|consen 458 D-EFQIISSSHDDTILIWDFLNGPPS 482 (499)
T ss_pred c-ceEEEeccCCCeEEEEEcCCCCcc
Confidence 2 337899999999999999877555
No 439
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.92 E-value=8e-24 Score=223.69 Aligned_cols=296 Identities=18% Similarity=0.270 Sum_probs=221.7
Q ss_pred eccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEE
Q 000410 1134 HLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHM 1213 (1553)
Q Consensus 1134 ~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~v 1213 (1553)
-|+||..+++.|.++.+|.+|.||+.|.+..||-...++ ..-+|.+|.+.|+|+...-+.+.+++|+.|.++++
T Consensus 5 ~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGe------rlGty~GHtGavW~~Did~~s~~liTGSAD~t~kL 78 (327)
T KOG0643|consen 5 LLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGE------RLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKL 78 (327)
T ss_pred ccccCccccceEEecCCCcEEEEecCCCCceEEEecCCc------eeeeecCCCceEEEEEecCCcceeeeccccceeEE
Confidence 368999999999999999999999999999999988777 34489999999999999999999999999999999
Q ss_pred EEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCC-----ceEEEEeCCCC-------ccc
Q 000410 1214 FSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQN-----CGIHLWDTRSN-------SNT 1281 (1553)
Q Consensus 1214 wdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~d-----g~I~iwDlrt~-------~~~ 1281 (1553)
||+.+.. .+ .....+.+|..+.|+.+ ++++++++.+ +.|.++|+|.. ++.
T Consensus 79 WDv~tGk-------------~l--a~~k~~~~Vk~~~F~~~---gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~ 140 (327)
T KOG0643|consen 79 WDVETGK-------------QL--ATWKTNSPVKRVDFSFG---GNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPY 140 (327)
T ss_pred EEcCCCc-------------EE--EEeecCCeeEEEeeccC---CcEEEEEehhhcCcceEEEEEEccCChhhhcccCce
Confidence 9998521 11 22245678899999998 6677776654 57999999943 333
Q ss_pred ceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEE
Q 000410 1282 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVA 1361 (1553)
Q Consensus 1282 ~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~ 1361 (1553)
..+.. +...+++..|+|.+.++++|..+|.|..||++++..+..-...|...|+.+++ ++ ++.+++++
T Consensus 141 ~kI~t--~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~-s~---------d~T~FiT~ 208 (327)
T KOG0643|consen 141 LKIPT--PDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQF-SR---------DRTYFITG 208 (327)
T ss_pred EEecC--CccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccc-cC---------CcceEEec
Confidence 34433 56889999999999999999999999999999976554444446668888887 44 45699999
Q ss_pred EcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccC
Q 000410 1362 AGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL 1441 (1553)
Q Consensus 1362 s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~s 1441 (1553)
+.|...++||+.+.++++++.... +|++.+++
T Consensus 209 s~Dttakl~D~~tl~v~Kty~te~------------------------------------------------PvN~aais 240 (327)
T KOG0643|consen 209 SKDTTAKLVDVRTLEVLKTYTTER------------------------------------------------PVNTAAIS 240 (327)
T ss_pred ccCccceeeeccceeeEEEeeecc------------------------------------------------cccceecc
Confidence 999999999999999999987321 46777777
Q ss_pred CCC-eEE-EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCc
Q 000410 1442 PGG-DLL-TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDS 1519 (1553)
Q Consensus 1442 p~g-~ll-Tgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 1519 (1553)
|.. .++ -||.+-+ |+.+- ++. .+.=..-|| ...-..-...
T Consensus 241 P~~d~VilgGGqeA~----dVTTT------~~r--~GKFEArFy--------------------------h~i~eEEigr 282 (327)
T KOG0643|consen 241 PLLDHVILGGGQEAM----DVTTT------STR--AGKFEARFY--------------------------HLIFEEEIGR 282 (327)
T ss_pred cccceEEecCCceee----eeeee------ccc--ccchhhhHH--------------------------HHHHHHHhcc
Confidence 744 444 4443322 11100 000 000000011 0011112235
Q ss_pred cCCCccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000410 1520 AGCHRDSILSLGSVKLNQRLLISSSRDGAIKVW 1552 (1553)
Q Consensus 1520 ~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVW 1552 (1553)
.++|-++|++| +|+|+|+..+||+.||.|+|.
T Consensus 283 vkGHFGPINsv-AfhPdGksYsSGGEDG~VR~h 314 (327)
T KOG0643|consen 283 VKGHFGPINSV-AFHPDGKSYSSGGEDGYVRLH 314 (327)
T ss_pred ccccccCccee-EECCCCcccccCCCCceEEEE
Confidence 67899999999 699999999999999999973
No 440
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=9e-24 Score=244.61 Aligned_cols=250 Identities=16% Similarity=0.265 Sum_probs=211.8
Q ss_pred eeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEE
Q 000410 1133 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIH 1212 (1553)
Q Consensus 1133 ~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~ 1212 (1553)
..+..|++.|.++.++|...+++++-..|.|.|||.++.. -...++-..-+|.+..|.+.-+.+++|++|+.|+
T Consensus 7 rk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqt------mVksfeV~~~PvRa~kfiaRknWiv~GsDD~~Ir 80 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQT------MVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIR 80 (794)
T ss_pred hHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccce------eeeeeeecccchhhheeeeccceEEEecCCceEE
Confidence 4566799999999999999999999999999999998765 2224445566799999999999999999999999
Q ss_pred EEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCC-cccceeccCCCCc
Q 000410 1213 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN-SNTWTLKAIPEEG 1291 (1553)
Q Consensus 1213 vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~-~~~~~l~~~~h~g 1291 (1553)
||+.++.. ..+....|..-+.+++.||. ..++++++.|-+|++||-..+ .+.+++++ |..
T Consensus 81 Vfnynt~e--------------kV~~FeAH~DyIR~iavHPt---~P~vLtsSDDm~iKlW~we~~wa~~qtfeG--H~H 141 (794)
T KOG0276|consen 81 VFNYNTGE--------------KVKTFEAHSDYIRSIAVHPT---LPYVLTSSDDMTIKLWDWENEWACEQTFEG--HEH 141 (794)
T ss_pred EEecccce--------------eeEEeeccccceeeeeecCC---CCeEEecCCccEEEEeeccCceeeeeEEcC--cce
Confidence 99997421 12234467888999999998 679999999999999999865 57778877 888
Q ss_pred ceEEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEE
Q 000410 1292 YVSSLVTGP-CGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLW 1370 (1553)
Q Consensus 1292 ~Itsl~~sp-~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vW 1370 (1553)
.|.+++|.| |.+.+++|+-|++|++|.+....+..+++. |...|++++++ +.+ +.+++++|+.|..|+||
T Consensus 142 yVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~g-HekGVN~Vdyy-~~g-------dkpylIsgaDD~tiKvW 212 (794)
T KOG0276|consen 142 YVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEG-HEKGVNCVDYY-TGG-------DKPYLISGADDLTIKVW 212 (794)
T ss_pred EEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeec-cccCcceEEec-cCC-------CcceEEecCCCceEEEe
Confidence 999999999 568999999999999999999999999984 78899999994 333 46899999999999999
Q ss_pred EcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEc
Q 000410 1371 NAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTG 1449 (1553)
Q Consensus 1371 Dl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTg 1449 (1553)
|..+.+|++++.++ ...|.++.|+|.- .++||
T Consensus 213 DyQtk~CV~TLeGH-----------------------------------------------t~Nvs~v~fhp~lpiiisg 245 (794)
T KOG0276|consen 213 DYQTKSCVQTLEGH-----------------------------------------------TNNVSFVFFHPELPIIISG 245 (794)
T ss_pred ecchHHHHHHhhcc-----------------------------------------------cccceEEEecCCCcEEEEe
Confidence 99999998888633 2368899999976 67799
Q ss_pred cCCCeEEEEeCCCC
Q 000410 1450 GTDLKIRRWDHCSP 1463 (1553)
Q Consensus 1450 g~Dg~IrlWDl~~~ 1463 (1553)
+.||++|+|+-.+-
T Consensus 246 sEDGTvriWhs~Ty 259 (794)
T KOG0276|consen 246 SEDGTVRIWNSKTY 259 (794)
T ss_pred cCCccEEEecCcce
Confidence 99999999996643
No 441
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.92 E-value=1.8e-24 Score=236.95 Aligned_cols=283 Identities=19% Similarity=0.306 Sum_probs=215.4
Q ss_pred EeeeccccccCeeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCC
Q 000410 1131 LVAHLQEHCSAVNEIAISHDH-SFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1209 (1553)
Q Consensus 1131 lv~~l~~H~~~V~~l~~spd~-~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG 1209 (1553)
.|+.|.||.+.|.+++=+|.. ..++|||.||.|+|||+...+ +..++.+|.+.|..+++.. ..++++|+|.
T Consensus 58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~------~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDK 129 (433)
T KOG0268|consen 58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRE------CIRTFKAHEGLVRGICVTQ--TSFFTVGDDK 129 (433)
T ss_pred chhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhh------hhheeecccCceeeEEecc--cceEEecCCc
Confidence 688999999999999999976 789999999999999998765 6678899999999998865 7899999999
Q ss_pred cEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCC
Q 000410 1210 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE 1289 (1553)
Q Consensus 1210 ~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h 1289 (1553)
+|+.|.++. . ....+ .....+..+.-+.. ++.+++|+. .|.+||..-...+.++.. .
T Consensus 130 tvK~wk~~~------~--------p~~ti--lg~s~~~gIdh~~~---~~~FaTcGe--~i~IWD~~R~~Pv~smsw--G 186 (433)
T KOG0268|consen 130 TVKQWKIDG------P--------PLHTI--LGKSVYLGIDHHRK---NSVFATCGE--QIDIWDEQRDNPVSSMSW--G 186 (433)
T ss_pred ceeeeeccC------C--------cceee--eccccccccccccc---cccccccCc--eeeecccccCCccceeec--C
Confidence 999999872 0 11111 11223333333332 336666655 589999998888888875 5
Q ss_pred CcceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEE
Q 000410 1290 EGYVSSLVTGPCG-NWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVS 1368 (1553)
Q Consensus 1290 ~g~Itsl~~sp~g-~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~ 1368 (1553)
.+.|.|+.|+|.. ..|++|.+|+.|.++|+|...+++..... -.-+.++| .|. +..+++|+.|..+.
T Consensus 187 ~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~Pl~KVi~~--mRTN~Isw-nPe---------afnF~~a~ED~nlY 254 (433)
T KOG0268|consen 187 ADSISSVKFNPVETSILASCASDRSIVLYDLRQASPLKKVILT--MRTNTICW-NPE---------AFNFVAANEDHNLY 254 (433)
T ss_pred CCceeEEecCCCcchheeeeccCCceEEEecccCCccceeeee--ccccceec-Ccc---------ccceeeccccccce
Confidence 6679999999966 56777889999999999999999877653 24567778 662 23577888899999
Q ss_pred EEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEE
Q 000410 1369 LWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL 1447 (1553)
Q Consensus 1369 vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~ll 1447 (1553)
.+|++..+. | +....+|...|.++.|+|.| .++
T Consensus 255 ~~DmR~l~~------------------------p----------------------~~v~~dhvsAV~dVdfsptG~Efv 288 (433)
T KOG0268|consen 255 TYDMRNLSR------------------------P----------------------LNVHKDHVSAVMDVDFSPTGQEFV 288 (433)
T ss_pred ehhhhhhcc------------------------c----------------------chhhcccceeEEEeccCCCcchhc
Confidence 999985431 1 11124566789999999999 799
Q ss_pred EccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccce
Q 000410 1448 TGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSI 1527 (1553)
Q Consensus 1448 Tgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I 1527 (1553)
|||.|++||++....+.. +..|. .+ -...|
T Consensus 289 sgsyDksIRIf~~~~~~S--------------RdiYh-----------------------tk-------------RMq~V 318 (433)
T KOG0268|consen 289 SGSYDKSIRIFPVNHGHS--------------RDIYH-----------------------TK-------------RMQHV 318 (433)
T ss_pred cccccceEEEeecCCCcc--------------hhhhh-----------------------Hh-------------hhhee
Confidence 999999999999874321 11110 00 12458
Q ss_pred eEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1528 LSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1528 ~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.+| .|+.+.++|+|||+||.|++||
T Consensus 319 ~~V-k~S~Dskyi~SGSdd~nvRlWk 343 (433)
T KOG0268|consen 319 FCV-KYSMDSKYIISGSDDGNVRLWK 343 (433)
T ss_pred eEE-EEeccccEEEecCCCcceeeee
Confidence 888 6999999999999999999997
No 442
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.92 E-value=3.7e-24 Score=253.38 Aligned_cols=263 Identities=13% Similarity=0.180 Sum_probs=214.8
Q ss_pred ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCC-cEEEEEeC
Q 000410 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS-AQVVVGAC 1207 (1553)
Q Consensus 1129 G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~-~~las~s~ 1207 (1553)
|.--..+.||++.|.++.+..+|.+|+|||.|.+|++|-++... ....+...+.+|.+.|.+++++..+ ..||++|.
T Consensus 355 ~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~--~~~~~~a~~~gH~~svgava~~~~~asffvsvS~ 432 (775)
T KOG0319|consen 355 TSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNC--SKSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQ 432 (775)
T ss_pred CCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCc--chhhhhhhhcccccccceeeecccCccEEEEecC
Confidence 43344789999999999977788999999999999999873322 1223556788999999999997755 57899999
Q ss_pred CCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccC
Q 000410 1208 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1287 (1553)
Q Consensus 1208 DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~ 1287 (1553)
|+++++|++.. +.. ......-..+.....|+.-|++++.+|+ ..++++|+.|.+.++|++...+...+|.+
T Consensus 433 D~tlK~W~l~~-s~~----~~~~~~~~~~~t~~aHdKdIN~Vaia~n---dkLiAT~SqDktaKiW~le~~~l~~vLsG- 503 (775)
T KOG0319|consen 433 DCTLKLWDLPK-SKE----TAFPIVLTCRYTERAHDKDINCVAIAPN---DKLIATGSQDKTAKIWDLEQLRLLGVLSG- 503 (775)
T ss_pred CceEEEecCCC-ccc----ccccceehhhHHHHhhcccccceEecCC---CceEEecccccceeeecccCceEEEEeeC-
Confidence 99999999973 111 1111111122233457788999999999 67999999999999999998888899987
Q ss_pred CCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeE
Q 000410 1288 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEV 1367 (1553)
Q Consensus 1288 ~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V 1367 (1553)
|...|.|+.|+|..+.++++|.|++|++|.+.++.|++++.. |.+.|-+..|. .++..+++++.||.+
T Consensus 504 -H~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eG-H~~aVlra~F~----------~~~~qliS~~adGli 571 (775)
T KOG0319|consen 504 -HTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEG-HTSAVLRASFI----------RNGKQLISAGADGLI 571 (775)
T ss_pred -CccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecC-ccceeEeeeee----------eCCcEEEeccCCCcE
Confidence 999999999999999999999999999999999999999986 67778887772 245689999999999
Q ss_pred EEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eE
Q 000410 1368 SLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DL 1446 (1553)
Q Consensus 1368 ~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~l 1446 (1553)
++|++.+++|...+..++. .|++++.++.+ .+
T Consensus 572 KlWnikt~eC~~tlD~H~D-----------------------------------------------rvWaL~~~~~~~~~ 604 (775)
T KOG0319|consen 572 KLWNIKTNECEMTLDAHND-----------------------------------------------RVWALSVSPLLDMF 604 (775)
T ss_pred EEEeccchhhhhhhhhccc-----------------------------------------------eeEEEeecCcccee
Confidence 9999999999888764432 68999998877 67
Q ss_pred EEccCCCeEEEEeCC
Q 000410 1447 LTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1447 lTgg~Dg~IrlWDl~ 1461 (1553)
+|||.||+|.+|.=.
T Consensus 605 ~tgg~Dg~i~~wkD~ 619 (775)
T KOG0319|consen 605 VTGGGDGRIIFWKDV 619 (775)
T ss_pred EecCCCeEEEEeecC
Confidence 799999999999743
No 443
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.92 E-value=1.9e-23 Score=259.56 Aligned_cols=262 Identities=23% Similarity=0.380 Sum_probs=208.2
Q ss_pred Cccc-Ccc--EeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCc
Q 000410 1124 GWRP-RGI--LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1200 (1553)
Q Consensus 1124 ~W~p-~G~--lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~ 1200 (1553)
.|.. .+. +...+.+|...|++++|+||++++++|+.|+++||||+.... +...++.+|...|+|++|+|.++
T Consensus 185 ~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~-----~~~~~l~gH~~~v~~~~f~p~g~ 259 (456)
T KOG0266|consen 185 IWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDG-----RNLKTLKGHSTYVTSVAFSPDGN 259 (456)
T ss_pred EeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCC-----eEEEEecCCCCceEEEEecCCCC
Confidence 4654 344 778889999999999999999999999999999999994332 25668889999999999999999
Q ss_pred EEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCc-
Q 000410 1201 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS- 1279 (1553)
Q Consensus 1201 ~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~- 1279 (1553)
.+++|+.|++|+|||+.+. .+......|...|..++|+++ +..|++++.|+.|++||+.++.
T Consensus 260 ~i~Sgs~D~tvriWd~~~~--------------~~~~~l~~hs~~is~~~f~~d---~~~l~s~s~d~~i~vwd~~~~~~ 322 (456)
T KOG0266|consen 260 LLVSGSDDGTVRIWDVRTG--------------ECVRKLKGHSDGISGLAFSPD---GNLLVSASYDGTIRVWDLETGSK 322 (456)
T ss_pred EEEEecCCCcEEEEeccCC--------------eEEEeeeccCCceEEEEECCC---CCEEEEcCCCccEEEEECCCCce
Confidence 9999999999999999741 222333456778899999999 7799999999999999999999
Q ss_pred -ccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEE
Q 000410 1280 -NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLI 1358 (1553)
Q Consensus 1280 -~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l 1358 (1553)
+...+....+..++++++|+|++.++++++.|+.+++||++....+..+...... + .+++.+.. .+.+.++
T Consensus 323 ~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~-~--~~~~~~~~-----~~~~~~i 394 (456)
T KOG0266|consen 323 LCLKLLSGAENSAPVTSVQFSPNGKYLLSASLDRTLKLWDLRSGKSVGTYTGHSNL-V--RCIFSPTL-----STGGKLI 394 (456)
T ss_pred eeeecccCCCCCCceeEEEECCCCcEEEEecCCCeEEEEEccCCcceeeecccCCc-c--eeEecccc-----cCCCCeE
Confidence 5566654222226999999999999999999999999999999999888765443 2 23323222 4568899
Q ss_pred EEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEe
Q 000410 1359 YVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSL 1438 (1553)
Q Consensus 1359 ~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl 1438 (1553)
++|+.|+.|.+||+.++..++.+..+. ...+..+
T Consensus 395 ~sg~~d~~v~~~~~~s~~~~~~l~~h~----------------------------------------------~~~~~~~ 428 (456)
T KOG0266|consen 395 YSGSEDGSVYVWDSSSGGILQRLEGHS----------------------------------------------KAAVSDL 428 (456)
T ss_pred EEEeCCceEEEEeCCccchhhhhcCCC----------------------------------------------CCceecc
Confidence 999999999999999876544443210 2357888
Q ss_pred ccCCCC-eEEEcc--CCCeEEEEeCC
Q 000410 1439 LPLPGG-DLLTGG--TDLKIRRWDHC 1461 (1553)
Q Consensus 1439 ~~sp~g-~llTgg--~Dg~IrlWDl~ 1461 (1553)
.+++.. .+++++ .|+.|++|...
T Consensus 429 ~~~~~~~~~~s~s~~~d~~~~~w~~~ 454 (456)
T KOG0266|consen 429 SSHPTENLIASSSFEGDGLIRLWKYD 454 (456)
T ss_pred ccCCCcCeeeecCcCCCceEEEecCC
Confidence 888877 455666 79999999754
No 444
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.92 E-value=1.1e-23 Score=233.57 Aligned_cols=209 Identities=27% Similarity=0.353 Sum_probs=177.5
Q ss_pred eeccCcEEEEEEEEC--CceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEecccc-C
Q 000410 33 LGGSRFFKSILCKHD--EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLRQYFF-N 109 (1553)
Q Consensus 33 LG~G~fg~V~~a~~~--~~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~E~~~-g 109 (1553)
||+|.+|.||++... +..+++|++...... .....+.+|...++.+.|++|+++++++......++++||++ +
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~----~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~ 76 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSS----SLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGG 76 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccch----hHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCC
Confidence 689999999999997 577999999654211 134668888899999999999999999999899999999999 6
Q ss_pred CHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEec-CCcEEEeecCccccccCCCCCCCCccee
Q 000410 110 SLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTS-WNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 110 sL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~-~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
+|.+++... ..++...+..++.|++.+|++||++|++|+||+|.||+++. .+.++|+|||.+........ .
T Consensus 77 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~-------~ 149 (215)
T cd00180 77 SLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS-------L 149 (215)
T ss_pred cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc-------h
Confidence 999999775 46899999999999999999999999999999999999999 89999999998875532211 1
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchHHHHHHhcCCCCCCCCCCCCCHH
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKIPDSG 267 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (1553)
.....+...|++||.+... ...+.+.|+|++|+++++| ..
T Consensus 150 ~~~~~~~~~~~~pe~~~~~---------~~~~~~~D~~~lg~~~~~l-------------------------------~~ 189 (215)
T cd00180 150 LKTIVGTPAYMAPEVLLGK---------GYYSEKSDIWSLGVILYEL-------------------------------PE 189 (215)
T ss_pred hhcccCCCCccChhHhccc---------CCCCchhhhHHHHHHHHHH-------------------------------HH
Confidence 1223356679999976421 2567889999999999998 57
Q ss_pred HHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 268 IRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 268 l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
+.+++.+|++.||++||++++++++
T Consensus 190 ~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 190 LKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHHHhhCCcccCcCHHHHhhC
Confidence 9999999999999999999999976
No 445
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.91 E-value=8.7e-26 Score=265.85 Aligned_cols=248 Identities=21% Similarity=0.204 Sum_probs=201.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV 103 (1553)
+|.+...+|+|.||.||+|++.. ...|+|+++.... .+ ..-++.|+-+++.++||||+.|++.|..+..+++.
T Consensus 16 dyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~-dd----~~~iqqei~~~~dc~h~nivay~gsylr~dklwic 90 (829)
T KOG0576|consen 16 DYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG-DD----FSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWIC 90 (829)
T ss_pred chhheeeecCCcccchhhhcccccCchhhheeeeccCC-cc----ccccccceeeeecCCCcChHHHHhhhhhhcCcEEE
Confidence 89999999999999999999864 6799999976521 11 23355566788899999999999999999999999
Q ss_pred ecccc-CCHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~E~~~-gsL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||||+ |+|.|.-.-.+.+++.++....+..+.||+|||++|-+|||||-.|||+++.|.+||+|||.+..+....
T Consensus 91 MEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati---- 166 (829)
T KOG0576|consen 91 MEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATI---- 166 (829)
T ss_pred EEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhh----
Confidence 99999 6999988878889999999999999999999999999999999999999999999999999875442211
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCC-CCCCchHHHHH---HhcCCCCCC
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEV-PFFELSHLLAY---RRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~-~pf~~~~~~~~---~~~~~~~~~ 258 (1553)
.......||++|||||+-. +...+.|...+|||++|+...|+---+ |.|+...+... .+..+.+..
T Consensus 167 ---~KrksfiGtpywmapEvaa-------verkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~ 236 (829)
T KOG0576|consen 167 ---AKRKSFIGTPYWMAPEVAA-------VERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPT 236 (829)
T ss_pred ---hhhhcccCCccccchhHHH-------HHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCc
Confidence 1223456899999999753 455678999999999999999987764 45665554332 334444332
Q ss_pred -CCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 259 -HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 -~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
.-....++.+.+|++.+|.++|++||+++.+|.|
T Consensus 237 lkDk~kws~~fh~fvK~altknpKkRptaeklL~h 271 (829)
T KOG0576|consen 237 LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQH 271 (829)
T ss_pred ccCCccchHHHHHHHHHHhcCCCccCCChhhheec
Confidence 2222446789999999999999999999999987
No 446
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.91 E-value=4.1e-23 Score=243.98 Aligned_cols=282 Identities=21% Similarity=0.346 Sum_probs=227.4
Q ss_pred eeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEE
Q 000410 1133 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIH 1212 (1553)
Q Consensus 1133 ~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~ 1212 (1553)
-.+.||+..|.++++|.|+..++||+. +.++||+..++. +..+..+ +.+.|..|.|+++++++|...|.+.
T Consensus 367 i~~~GHR~dVRsl~vS~d~~~~~Sga~-~SikiWn~~t~k------ciRTi~~--~y~l~~~Fvpgd~~Iv~G~k~Gel~ 437 (888)
T KOG0306|consen 367 IEIGGHRSDVRSLCVSSDSILLASGAG-ESIKIWNRDTLK------CIRTITC--GYILASKFVPGDRYIVLGTKNGELQ 437 (888)
T ss_pred eeeccchhheeEEEeecCceeeeecCC-CcEEEEEccCcc------eeEEecc--ccEEEEEecCCCceEEEeccCCceE
Confidence 356799999999999999888888765 789999999876 3334433 3699999999999999999999999
Q ss_pred EEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCc-----c-------
Q 000410 1213 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS-----N------- 1280 (1553)
Q Consensus 1213 vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~-----~------- 1280 (1553)
+||+... .+......|...+..++..|+ +..+++|+.|.+|++||..-.. .
T Consensus 438 vfdlaS~--------------~l~Eti~AHdgaIWsi~~~pD---~~g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~ 500 (888)
T KOG0306|consen 438 VFDLASA--------------SLVETIRAHDGAIWSISLSPD---NKGFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLK 500 (888)
T ss_pred EEEeehh--------------hhhhhhhccccceeeeeecCC---CCceEEecCCcEEEEEeEEEEeccCcccceeeeec
Confidence 9999731 111222367788899999999 7799999999999999985321 1
Q ss_pred -cceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEE
Q 000410 1281 -TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1359 (1553)
Q Consensus 1281 -~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~ 1359 (1553)
..+++. ...|.|+.+||||++|++|--|.++++|-+.+.+-.-++- +|.-||.++.. +|+ +.+++
T Consensus 501 ~~rtLel---~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLY-GHkLPV~smDI-S~D---------Skliv 566 (888)
T KOG0306|consen 501 HTRTLEL---EDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLY-GHKLPVLSMDI-SPD---------SKLIV 566 (888)
T ss_pred cceEEec---cccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeec-ccccceeEEec-cCC---------cCeEE
Confidence 123332 4579999999999999999999999999888766655554 47789999988 554 56999
Q ss_pred EEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEec
Q 000410 1360 VAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1439 (1553)
Q Consensus 1360 s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1439 (1553)
+||.|..|+||-+.-|.|.+.+-. |+.+|.++.
T Consensus 567 TgSADKnVKiWGLdFGDCHKS~fA-----------------------------------------------HdDSvm~V~ 599 (888)
T KOG0306|consen 567 TGSADKNVKIWGLDFGDCHKSFFA-----------------------------------------------HDDSVMSVQ 599 (888)
T ss_pred eccCCCceEEeccccchhhhhhhc-----------------------------------------------ccCceeEEE
Confidence 999999999999999999877653 333799999
Q ss_pred cCCCC-eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcC
Q 000410 1440 PLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATD 1518 (1553)
Q Consensus 1440 ~sp~g-~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 1518 (1553)
|.|.. .++|+|.|+.|+.||-..-+....
T Consensus 600 F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~-------------------------------------------------- 629 (888)
T KOG0306|consen 600 FLPKTHLFFTCGKDGKVKQWDGEKFEEIQK-------------------------------------------------- 629 (888)
T ss_pred EcccceeEEEecCcceEEeechhhhhhhee--------------------------------------------------
Confidence 99977 566999999999999665444332
Q ss_pred ccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1519 SAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1519 ~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
+.+|+..|+++ +..++|.+++|+|.|..|++|.
T Consensus 630 -L~~H~~ev~cL-av~~~G~~vvs~shD~sIRlwE 662 (888)
T KOG0306|consen 630 -LDGHHSEVWCL-AVSPNGSFVVSSSHDKSIRLWE 662 (888)
T ss_pred -eccchheeeee-EEcCCCCeEEeccCCceeEeee
Confidence 23499999999 6889999999999999999994
No 447
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=2.9e-23 Score=230.41 Aligned_cols=253 Identities=19% Similarity=0.228 Sum_probs=206.1
Q ss_pred ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeec-CCCceEEEEEecCCcEEEEEeC
Q 000410 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHL-EGSRALCTMMLRHSAQVVVGAC 1207 (1553)
Q Consensus 1129 G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~-h~~~I~~l~f~~~~~~las~s~ 1207 (1553)
-++..++.+|..+|.-|.||||.+++++|+.|..+++||+.+++. +..|.. ++..+.|++|+|+|..+++|+.
T Consensus 259 ~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~tgd~------~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~ 332 (519)
T KOG0293|consen 259 FKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDTGDL------RHLYPSGLGFSVSSCAWCPDGFRFVTGSP 332 (519)
T ss_pred eeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCcchh------hhhcccCcCCCcceeEEccCCceeEecCC
Confidence 457899999999999999999999999999999999999999983 333332 4567999999999999999999
Q ss_pred CCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccC
Q 000410 1208 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1287 (1553)
Q Consensus 1208 DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~ 1287 (1553)
|++|..||.+. ++ ...|.......|.+++..++ |..+++.+.|..|++++..+..+.....
T Consensus 333 dr~i~~wdlDg------n~--------~~~W~gvr~~~v~dlait~D---gk~vl~v~~d~~i~l~~~e~~~dr~lis-- 393 (519)
T KOG0293|consen 333 DRTIIMWDLDG------NI--------LGNWEGVRDPKVHDLAITYD---GKYVLLVTVDKKIRLYNREARVDRGLIS-- 393 (519)
T ss_pred CCcEEEecCCc------ch--------hhcccccccceeEEEEEcCC---CcEEEEEecccceeeechhhhhhhcccc--
Confidence 99999999982 11 22333334467888999998 7788999999999999998877665444
Q ss_pred CCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccC-CcceEEeecCCCCCccccCCCCEEEEEEcCCe
Q 000410 1288 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVC-PIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1366 (1553)
Q Consensus 1288 ~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~-~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~ 1366 (1553)
.+.+|++++++.+|+++++.-.+..+++||+.....++.+..+..+ -+-+-|| .. .+..++++||.|+.
T Consensus 394 -e~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCF-gg--------~~~~fiaSGSED~k 463 (519)
T KOG0293|consen 394 -EEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCF-GG--------GNDKFIASGSEDSK 463 (519)
T ss_pred -ccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHHhhcccccceEEEecc-CC--------CCcceEEecCCCce
Confidence 4678999999999999999999999999999988887777653332 2334444 21 13468999999999
Q ss_pred EEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC--
Q 000410 1367 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-- 1444 (1553)
Q Consensus 1367 V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-- 1444 (1553)
|+||+-.+|..+.++.++. ..|+|++|+|..
T Consensus 464 vyIWhr~sgkll~~LsGHs-----------------------------------------------~~vNcVswNP~~p~ 496 (519)
T KOG0293|consen 464 VYIWHRISGKLLAVLSGHS-----------------------------------------------KTVNCVSWNPADPE 496 (519)
T ss_pred EEEEEccCCceeEeecCCc-----------------------------------------------ceeeEEecCCCCHH
Confidence 9999999999888876433 379999999976
Q ss_pred eEEEccCCCeEEEEeCCCC
Q 000410 1445 DLLTGGTDLKIRRWDHCSP 1463 (1553)
Q Consensus 1445 ~llTgg~Dg~IrlWDl~~~ 1463 (1553)
.+++||+||+||+|-....
T Consensus 497 m~ASasDDgtIRIWg~~~~ 515 (519)
T KOG0293|consen 497 MFASASDDGTIRIWGPSDN 515 (519)
T ss_pred HhhccCCCCeEEEecCCcc
Confidence 6779999999999987643
No 448
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=99.91 E-value=3.1e-23 Score=223.10 Aligned_cols=254 Identities=20% Similarity=0.246 Sum_probs=201.1
Q ss_pred CcccCccE--eeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEec-CCc
Q 000410 1124 GWRPRGIL--VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLR-HSA 1200 (1553)
Q Consensus 1124 ~W~p~G~l--v~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~-~~~ 1200 (1553)
+|+-.|.+ ...+++|+++|..+.|.+|+..++|||.|.+|+.||+++++ ....+.+|...|.+++-+. +..
T Consensus 73 LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~------~~rk~k~h~~~vNs~~p~rrg~~ 146 (338)
T KOG0265|consen 73 LWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGK------RIRKHKGHTSFVNSLDPSRRGPQ 146 (338)
T ss_pred EEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccce------eeehhccccceeeecCccccCCe
Confidence 69977765 67888999999999999999999999999999999999987 3445667888888877443 345
Q ss_pred EEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcc
Q 000410 1201 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1280 (1553)
Q Consensus 1201 ~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~ 1280 (1553)
.+.+|++||++++||++... .+. .......++.+.|.-. +..+.+|+-|+.|++||+|....
T Consensus 147 lv~SgsdD~t~kl~D~R~k~-------------~~~--t~~~kyqltAv~f~d~---s~qv~sggIdn~ikvWd~r~~d~ 208 (338)
T KOG0265|consen 147 LVCSGSDDGTLKLWDIRKKE-------------AIK--TFENKYQLTAVGFKDT---SDQVISGGIDNDIKVWDLRKNDG 208 (338)
T ss_pred EEEecCCCceEEEEeecccc-------------hhh--ccccceeEEEEEeccc---ccceeeccccCceeeeccccCcc
Confidence 67789999999999998411 111 1123456778888877 56899999999999999999999
Q ss_pred cceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcc----cceeecc-ccCCcceEEeecCCCCCccccCCC
Q 000410 1281 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVP----VNSWQYS-QVCPIEKMCLFVPPPNAAVSTTAR 1355 (1553)
Q Consensus 1281 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~----l~s~~~~-~~~~I~~l~~~~p~~~~~~~s~~~ 1355 (1553)
..++.+ |.++|+.+..+|+|.++.+-+.|.++++||+|...+ ++.++.+ |+..++.+. ..+++++
T Consensus 209 ~~~lsG--h~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~--------cswsp~~ 278 (338)
T KOG0265|consen 209 LYTLSG--HADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLK--------CSWSPNG 278 (338)
T ss_pred eEEeec--ccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcce--------eeccCCC
Confidence 999987 999999999999999999999999999999996543 4444332 222222222 2345567
Q ss_pred CEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCc
Q 000410 1356 PLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGI 1435 (1553)
Q Consensus 1356 ~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V 1435 (1553)
..+.+|+.|..+.+||.....++..+. +|...|
T Consensus 279 ~~i~ags~dr~vyvwd~~~r~~lyklp-----------------------------------------------Gh~gsv 311 (338)
T KOG0265|consen 279 TKITAGSADRFVYVWDTTSRRILYKLP-----------------------------------------------GHYGSV 311 (338)
T ss_pred CccccccccceEEEeecccccEEEEcC-----------------------------------------------CcceeE
Confidence 789999999999999988777766654 344579
Q ss_pred EEeccCCCC-eEEEccCCCeEEEE
Q 000410 1436 RSLLPLPGG-DLLTGGTDLKIRRW 1458 (1553)
Q Consensus 1436 ~sl~~sp~g-~llTgg~Dg~IrlW 1458 (1553)
.++.|+|.. .|+++++|++|.+=
T Consensus 312 n~~~Fhp~e~iils~~sdk~i~lg 335 (338)
T KOG0265|consen 312 NEVDFHPTEPIILSCSSDKTIYLG 335 (338)
T ss_pred EEeeecCCCcEEEEeccCceeEee
Confidence 999999987 67799999999873
No 449
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=99.91 E-value=3.7e-22 Score=228.16 Aligned_cols=292 Identities=15% Similarity=0.222 Sum_probs=231.7
Q ss_pred EeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCC--
Q 000410 1131 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD-- 1208 (1553)
Q Consensus 1131 lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~D-- 1208 (1553)
.+..+.||..+|+-..|||.|-|+|||...|+|||||+...+.. ....+..-.++|.+++|..+++.+++.+..
T Consensus 51 ~~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hi----LKnef~v~aG~I~Di~Wd~ds~RI~avGEGre 126 (603)
T KOG0318|consen 51 SVDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHI----LKNEFQVLAGPIKDISWDFDSKRIAAVGEGRE 126 (603)
T ss_pred ceeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCccee----eeeeeeecccccccceeCCCCcEEEEEecCcc
Confidence 36778999999999999999999999999999999999865432 223455667899999999999999887743
Q ss_pred --CcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceecc
Q 000410 1209 --GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA 1286 (1553)
Q Consensus 1209 --G~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~ 1286 (1553)
|.+.+||-.+ ..| ...+|...+..++|-|..+ -.+++|+.|++|.+|+=.--+-..++..
T Consensus 127 rfg~~F~~DSG~---SvG-------------ei~GhSr~ins~~~KpsRP--fRi~T~sdDn~v~ffeGPPFKFk~s~r~ 188 (603)
T KOG0318|consen 127 RFGHVFLWDSGN---SVG-------------EITGHSRRINSVDFKPSRP--FRIATGSDDNTVAFFEGPPFKFKSSFRE 188 (603)
T ss_pred ceeEEEEecCCC---ccc-------------eeeccceeEeeeeccCCCc--eEEEeccCCCeEEEeeCCCeeeeecccc
Confidence 3444555431 011 1225667889999999853 3899999999999997543333334443
Q ss_pred CCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceee--ccccCCcceEEeecCCCCCccccCCCCEEEEEEcC
Q 000410 1287 IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQ--YSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGC 1364 (1553)
Q Consensus 1287 ~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~--~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~d 1364 (1553)
|+..|.|+-|+|||+.+++.++||.+.+||-.++..+..+. .+|.+.|..+.| +|+. ..++++++|
T Consensus 189 --HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsW-sPDs---------~~~~T~SaD 256 (603)
T KOG0318|consen 189 --HSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSW-SPDS---------TQFLTVSAD 256 (603)
T ss_pred --cccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEE-CCCC---------ceEEEecCC
Confidence 88899999999999999999999999999999999887776 357889999999 6654 489999999
Q ss_pred CeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC
Q 000410 1365 NEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG 1444 (1553)
Q Consensus 1365 g~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g 1444 (1553)
.+++|||+.+..+.+++....... +..| .+.| +.+
T Consensus 257 kt~KIWdVs~~slv~t~~~~~~v~-------------------------------------------dqqv-G~lW-qkd 291 (603)
T KOG0318|consen 257 KTIKIWDVSTNSLVSTWPMGSTVE-------------------------------------------DQQV-GCLW-QKD 291 (603)
T ss_pred ceEEEEEeeccceEEEeecCCchh-------------------------------------------ceEE-EEEE-eCC
Confidence 999999999999988886332200 0122 3444 367
Q ss_pred eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCc
Q 000410 1445 DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHR 1524 (1553)
Q Consensus 1445 ~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~ 1524 (1553)
.|+|.+-+|.|-+++..+++...+++| |.
T Consensus 292 ~lItVSl~G~in~ln~~d~~~~~~i~G---------------------------------------------------Hn 320 (603)
T KOG0318|consen 292 HLITVSLSGTINYLNPSDPSVLKVISG---------------------------------------------------HN 320 (603)
T ss_pred eEEEEEcCcEEEEecccCCChhheecc---------------------------------------------------cc
Confidence 899999999999999998876555554 99
Q ss_pred cceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1525 DSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1525 d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
-.|+++ ..++++.+|.|||.||.|.=|+
T Consensus 321 K~ITaL-tv~~d~~~i~SgsyDG~I~~W~ 348 (603)
T KOG0318|consen 321 KSITAL-TVSPDGKTIYSGSYDGHINSWD 348 (603)
T ss_pred cceeEE-EEcCCCCEEEeeccCceEEEEe
Confidence 999999 6899999999999999999995
No 450
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.90 E-value=2.9e-23 Score=217.01 Aligned_cols=282 Identities=17% Similarity=0.249 Sum_probs=225.6
Q ss_pred eccccccCeeEEEEcC---CCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCc
Q 000410 1134 HLQEHCSAVNEIAISH---DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1210 (1553)
Q Consensus 1134 ~l~~H~~~V~~l~~sp---d~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~ 1210 (1553)
+-+||+.+|..++||| +|=||+|++.||.=.+-+-+++. -.-++.+|.+.|+..+...+-..-|+++.|-+
T Consensus 9 ~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgd------wigtfeghkgavw~~~l~~na~~aasaaadft 82 (334)
T KOG0278|consen 9 TCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGD------WIGTFEGHKGAVWSATLNKNATRAASAAADFT 82 (334)
T ss_pred EEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCC------cEEeeeccCcceeeeecCchhhhhhhhcccch
Confidence 3468999999999986 77899999999987776666554 45588999999999998888888899999999
Q ss_pred EEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcc-cceeccCCC
Q 000410 1211 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN-TWTLKAIPE 1289 (1553)
Q Consensus 1211 I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~-~~~l~~~~h 1289 (1553)
-+|||.-+.. ......|..+|..++|+.+ .+.|++|+.+..+++||+...+. ...+ .+|
T Consensus 83 akvw~a~tgd---------------elhsf~hkhivk~~af~~d---s~~lltgg~ekllrvfdln~p~App~E~--~gh 142 (334)
T KOG0278|consen 83 AKVWDAVTGD---------------ELHSFEHKHIVKAVAFSQD---SNYLLTGGQEKLLRVFDLNRPKAPPKEI--SGH 142 (334)
T ss_pred hhhhhhhhhh---------------hhhhhhhhheeeeEEeccc---chhhhccchHHHhhhhhccCCCCCchhh--cCC
Confidence 9999986311 1233467889999999998 67999999999999999987543 2333 359
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEE
Q 000410 1290 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSL 1369 (1553)
Q Consensus 1290 ~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~v 1369 (1553)
.+.|..+.|-...+.+++.+.|++|++||.|+++.+++++.+ .+|+++.+ +++ |. +++.+..+.|.+
T Consensus 143 tg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~~--s~VtSlEv-s~d---------G~-ilTia~gssV~F 209 (334)
T KOG0278|consen 143 TGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEFN--SPVTSLEV-SQD---------GR-ILTIAYGSSVKF 209 (334)
T ss_pred CCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEecC--CCCcceee-ccC---------CC-EEEEecCceeEE
Confidence 999999999887788888899999999999999999999874 46777777 443 44 556666778999
Q ss_pred EEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEE
Q 000410 1370 WNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLT 1448 (1553)
Q Consensus 1370 WDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llT 1448 (1553)
||..+...++.+..+ ..|.+...+|+. ++++
T Consensus 210 wdaksf~~lKs~k~P------------------------------------------------~nV~SASL~P~k~~fVa 241 (334)
T KOG0278|consen 210 WDAKSFGLLKSYKMP------------------------------------------------CNVESASLHPKKEFFVA 241 (334)
T ss_pred eccccccceeeccCc------------------------------------------------cccccccccCCCceEEe
Confidence 999987765555411 135555566754 7889
Q ss_pred ccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCcccee
Q 000410 1449 GGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSIL 1528 (1553)
Q Consensus 1449 gg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~ 1528 (1553)
||.|+.++.+|..+++..-.+ .++|.++|.
T Consensus 242 Gged~~~~kfDy~TgeEi~~~--------------------------------------------------nkgh~gpVh 271 (334)
T KOG0278|consen 242 GGEDFKVYKFDYNTGEEIGSY--------------------------------------------------NKGHFGPVH 271 (334)
T ss_pred cCcceEEEEEeccCCceeeec--------------------------------------------------ccCCCCceE
Confidence 999999999999877553321 134999999
Q ss_pred EEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1529 SLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1529 ~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
+| .|+|+|...+|||.||+|++|.
T Consensus 272 cV-rFSPdGE~yAsGSEDGTirlWQ 295 (334)
T KOG0278|consen 272 CV-RFSPDGELYASGSEDGTIRLWQ 295 (334)
T ss_pred EE-EECCCCceeeccCCCceEEEEE
Confidence 99 7999999999999999999994
No 451
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.90 E-value=1.6e-22 Score=250.07 Aligned_cols=288 Identities=18% Similarity=0.254 Sum_probs=231.0
Q ss_pred CCcccCccE-eeeccc-cccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCc
Q 000410 1123 SGWRPRGIL-VAHLQE-HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1200 (1553)
Q Consensus 1123 ~~W~p~G~l-v~~l~~-H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~ 1200 (1553)
..|++.... ...+.+ |...|++..|. ..++++++.|+++++||...+. .....+.+|.+.|++++|...++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~-----~i~~~l~GH~g~V~~l~~~~~~~ 262 (537)
T KOG0274|consen 190 KNWRKLFRRGYKVLLGTDDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGY-----LILTRLVGHFGGVWGLAFPSGGD 262 (537)
T ss_pred ccccccccccceeecccCcchhhhheee--cCeEEecCCCceeEEeecccce-----EEEeeccCCCCCceeEEEecCCC
Confidence 456654333 233443 56789999997 6789999999999999998765 12333889999999999998899
Q ss_pred EEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcc
Q 000410 1201 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1280 (1553)
Q Consensus 1201 ~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~ 1280 (1553)
.+++|+.|.+++|||+.+. .+......|...+.++...+. .+++|+.|.+|++||+.++.+
T Consensus 263 ~lvsgS~D~t~rvWd~~sg--------------~C~~~l~gh~stv~~~~~~~~-----~~~sgs~D~tVkVW~v~n~~~ 323 (537)
T KOG0274|consen 263 KLVSGSTDKTERVWDCSTG--------------ECTHSLQGHTSSVRCLTIDPF-----LLVSGSRDNTVKVWDVTNGAC 323 (537)
T ss_pred EEEEEecCCcEEeEecCCC--------------cEEEEecCCCceEEEEEccCc-----eEeeccCCceEEEEeccCcce
Confidence 9999999999999997631 233444467788888866655 888899999999999999999
Q ss_pred cceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEE
Q 000410 1281 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYV 1360 (1553)
Q Consensus 1281 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s 1360 (1553)
+.++.+ |.++|+++.++ +..+++|+.||+|++||.+++++++++.. |..+|.++.+ .+. ..+++
T Consensus 324 l~l~~~--h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~~cl~sl~g-H~~~V~sl~~-~~~----------~~~~S 387 (537)
T KOG0274|consen 324 LNLLRG--HTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTGKCLKSLSG-HTGRVYSLIV-DSE----------NRLLS 387 (537)
T ss_pred EEEecc--ccccEEEEEec--CCEEEEEecCceEEEEEhhhceeeeeecC-CcceEEEEEe-cCc----------ceEEe
Confidence 999987 99999999998 78999999999999999999999999997 7888999866 221 57999
Q ss_pred EEcCCeEEEEEcCCC-cEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEec
Q 000410 1361 AAGCNEVSLWNAENG-SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1439 (1553)
Q Consensus 1361 ~s~dg~V~vWDl~tg-~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1439 (1553)
|+.|+.|++||++++ +|..++..+.. .|.++.
T Consensus 388 gs~D~~IkvWdl~~~~~c~~tl~~h~~-----------------------------------------------~v~~l~ 420 (537)
T KOG0274|consen 388 GSLDTTIKVWDLRTKRKCIHTLQGHTS-----------------------------------------------LVSSLL 420 (537)
T ss_pred eeeccceEeecCCchhhhhhhhcCCcc-----------------------------------------------cccccc
Confidence 999999999999999 89888764332 233333
Q ss_pred cCCCCeEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCc
Q 000410 1440 PLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDS 1519 (1553)
Q Consensus 1440 ~sp~g~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 1519 (1553)
+ -+..|++++.|++|++||...++..+++.++
T Consensus 421 ~-~~~~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~----------------------------------------------- 452 (537)
T KOG0274|consen 421 L-RDNFLVSSSADGTIKLWDAEEGECLRTLEGR----------------------------------------------- 452 (537)
T ss_pred c-ccceeEeccccccEEEeecccCceeeeeccC-----------------------------------------------
Confidence 2 2447889999999999999988877766542
Q ss_pred cCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1520 AGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1520 ~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
|...|+.++ +. ...++++++||.+++|+
T Consensus 453 ---~~~~v~~l~-~~--~~~il~s~~~~~~~l~d 480 (537)
T KOG0274|consen 453 ---HVGGVSALA-LG--KEEILCSSDDGSVKLWD 480 (537)
T ss_pred ---CcccEEEee-cC--cceEEEEecCCeeEEEe
Confidence 556777773 22 57899999999999995
No 452
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=3.9e-22 Score=238.34 Aligned_cols=269 Identities=17% Similarity=0.269 Sum_probs=218.7
Q ss_pred CCCCcccC-ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCC
Q 000410 1121 PDSGWRPR-GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1199 (1553)
Q Consensus 1121 ~~~~W~p~-G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~ 1199 (1553)
.-..|+-+ |.|+..|.||.++|..++|+|++.+|+||++|-.||||+.+.. ++..++.+|-..|..+.|++.-
T Consensus 32 ~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~r------rclftL~GHlDYVRt~~FHhey 105 (1202)
T KOG0292|consen 32 VIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTR------RCLFTLLGHLDYVRTVFFHHEY 105 (1202)
T ss_pred eeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccc------eehhhhccccceeEEeeccCCC
Confidence 34689955 9999999999999999999999999999999999999998864 3777888999999999999999
Q ss_pred cEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCc
Q 000410 1200 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1279 (1553)
Q Consensus 1200 ~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~ 1279 (1553)
-++++||+|.+|+||+..+ ..+.....+|..-|.|..|+|. ...++++|-|-+|++||+..-+
T Consensus 106 PWIlSASDDQTIrIWNwqs--------------r~~iavltGHnHYVMcAqFhpt---EDlIVSaSLDQTVRVWDisGLR 168 (1202)
T KOG0292|consen 106 PWILSASDDQTIRIWNWQS--------------RKCIAVLTGHNHYVMCAQFHPT---EDLIVSASLDQTVRVWDISGLR 168 (1202)
T ss_pred ceEEEccCCCeEEEEeccC--------------CceEEEEecCceEEEeeccCCc---cceEEEecccceEEEEeecchh
Confidence 9999999999999999973 1334455678889999999997 5699999999999999985311
Q ss_pred ---------------------------ccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeec--
Q 000410 1280 ---------------------------NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQY-- 1330 (1553)
Q Consensus 1280 ---------------------------~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~-- 1330 (1553)
.+-..-..+|...|+-++|+|.-..+++|+.|..|++|-+.. .+.|+.
T Consensus 169 kk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DDRqVKlWrmne---tKaWEvDt 245 (1202)
T KOG0292|consen 169 KKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNE---TKAWEVDT 245 (1202)
T ss_pred ccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCcceeeEEEecc---ccceeehh
Confidence 011111235888899999999999999999999999999863 345553
Q ss_pred --cccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCC
Q 000410 1331 --SQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNP 1408 (1553)
Q Consensus 1331 --~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~ 1408 (1553)
+|...|.++.| ||.. .++++.|.|+.|+|||+.+.+++++|+..+.
T Consensus 246 crgH~nnVssvlf-hp~q---------~lIlSnsEDksirVwDm~kRt~v~tfrrend---------------------- 293 (1202)
T KOG0292|consen 246 CRGHYNNVSSVLF-HPHQ---------DLILSNSEDKSIRVWDMTKRTSVQTFRREND---------------------- 293 (1202)
T ss_pred hhcccCCcceEEe-cCcc---------ceeEecCCCccEEEEecccccceeeeeccCC----------------------
Confidence 35557777777 7754 4899999999999999999999999873221
Q ss_pred CccccccccccccccccCCCCCCccCcEEeccCCCCeEEEccCCCeEEEEeCCCCCCceEEeCC
Q 000410 1409 KTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGP 1472 (1553)
Q Consensus 1409 ~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~llTgg~Dg~IrlWDl~~~~~s~~~~g~ 1472 (1553)
..+.++.+|...|+.+|.|+-+.++-++.....+.+.+.
T Consensus 294 -------------------------RFW~laahP~lNLfAAgHDsGm~VFkleRErpa~~v~~n 332 (1202)
T KOG0292|consen 294 -------------------------RFWILAAHPELNLFAAGHDSGMIVFKLERERPAYAVNGN 332 (1202)
T ss_pred -------------------------eEEEEEecCCcceeeeecCCceEEEEEcccCceEEEcCC
Confidence 357777778888888888888888888777777777664
No 453
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=99.90 E-value=4.8e-22 Score=209.90 Aligned_cols=284 Identities=19% Similarity=0.248 Sum_probs=225.5
Q ss_pred eeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEec-CCcEEEEEeCCCcE
Q 000410 1133 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLR-HSAQVVVGACDGII 1211 (1553)
Q Consensus 1133 ~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~-~~~~las~s~DG~I 1211 (1553)
..+++|.+.|.+|+|+.+|..+++||.|++++||++.... +.....+.+|++.|-.++|.| +.+.|++++.|.+|
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r----~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~i 89 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDR----FRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTI 89 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchh----hhhhhcccCCCcchhhheeCCCCCcceEEecCCceE
Confidence 5678999999999999999999999999999999998763 334567889998899999987 67899999999999
Q ss_pred EEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCc
Q 000410 1212 HMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEG 1291 (1553)
Q Consensus 1212 ~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g 1291 (1553)
++||++... ++...... +.-+ -+.|+|+ +.+++++..|..|...|.|+.+.....+. .-
T Consensus 90 r~wd~r~~k-------------~~~~i~~~-~eni-~i~wsp~---g~~~~~~~kdD~it~id~r~~~~~~~~~~---~~ 148 (313)
T KOG1407|consen 90 RIWDIRSGK-------------CTARIETK-GENI-NITWSPD---GEYIAVGNKDDRITFIDARTYKIVNEEQF---KF 148 (313)
T ss_pred EEEEeccCc-------------EEEEeecc-Ccce-EEEEcCC---CCEEEEecCcccEEEEEecccceeehhcc---cc
Confidence 999998411 11122222 2222 2468998 77999999999999999999887766554 34
Q ss_pred ceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEE
Q 000410 1292 YVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWN 1371 (1553)
Q Consensus 1292 ~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWD 1371 (1553)
.+.-++|+-++..++..+.-|.|.|-..-..+++.+++. |. .+++|. .++++|+++++|+.|..+.+||
T Consensus 149 e~ne~~w~~~nd~Fflt~GlG~v~ILsypsLkpv~si~A-H~--snCicI--------~f~p~GryfA~GsADAlvSLWD 217 (313)
T KOG1407|consen 149 EVNEISWNNSNDLFFLTNGLGCVEILSYPSLKPVQSIKA-HP--SNCICI--------EFDPDGRYFATGSADALVSLWD 217 (313)
T ss_pred eeeeeeecCCCCEEEEecCCceEEEEecccccccccccc-CC--cceEEE--------EECCCCceEeeccccceeeccC
Confidence 577889998788888878889999999888888888876 33 344433 3455678999999999999999
Q ss_pred cCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCCe-EEEcc
Q 000410 1372 AENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGD-LLTGG 1450 (1553)
Q Consensus 1372 l~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~-llTgg 1450 (1553)
++..-|.+++.-.+ -+||.+.|+.+|+ |++|+
T Consensus 218 ~~ELiC~R~isRld-----------------------------------------------wpVRTlSFS~dg~~lASaS 250 (313)
T KOG1407|consen 218 VDELICERCISRLD-----------------------------------------------WPVRTLSFSHDGRMLASAS 250 (313)
T ss_pred hhHhhhheeecccc-----------------------------------------------CceEEEEeccCcceeeccC
Confidence 99998988876222 2799999999995 55999
Q ss_pred CCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEE
Q 000410 1451 TDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSL 1530 (1553)
Q Consensus 1451 ~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~v 1530 (1553)
.|.-|-+=+++++.+..-+. |.++-..|
T Consensus 251 EDh~IDIA~vetGd~~~eI~----------------------------------------------------~~~~t~tV 278 (313)
T KOG1407|consen 251 EDHFIDIAEVETGDRVWEIP----------------------------------------------------CEGPTFTV 278 (313)
T ss_pred ccceEEeEecccCCeEEEee----------------------------------------------------ccCCceeE
Confidence 99999999998887665333 55667788
Q ss_pred eeeecCCcEEEEEcCC---------ceEEEc
Q 000410 1531 GSVKLNQRLLISSSRD---------GAIKVW 1552 (1553)
Q Consensus 1531 a~~~~~~~~LvSas~D---------G~IkVW 1552 (1553)
+|+|...+||-+.+| |.||+|
T Consensus 279 -AWHPk~~LLAyA~ddk~~d~~reag~vKiF 308 (313)
T KOG1407|consen 279 -AWHPKRPLLAYACDDKDGDSNREAGTVKIF 308 (313)
T ss_pred -EecCCCceeeEEecCCCCccccccceeEEe
Confidence 699999998887654 678876
No 454
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=99.90 E-value=2.3e-22 Score=248.73 Aligned_cols=257 Identities=22% Similarity=0.349 Sum_probs=213.3
Q ss_pred CCcc-cCccEeee-ccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCc
Q 000410 1123 SGWR-PRGILVAH-LQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1200 (1553)
Q Consensus 1123 ~~W~-p~G~lv~~-l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~ 1200 (1553)
..|+ -.|.++.. +.||.+.|.++++...+.+++|||.|.|++|||+.+++ +..++.+|.+.|.|+.. .+.
T Consensus 231 ~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~------C~~~l~gh~stv~~~~~--~~~ 302 (537)
T KOG0274|consen 231 HLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGE------CTHSLQGHTSSVRCLTI--DPF 302 (537)
T ss_pred EEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCc------EEEEecCCCceEEEEEc--cCc
Confidence 3688 44888877 99999999999998777899999999999999999987 66778899998988866 445
Q ss_pred EEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcc
Q 000410 1201 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1280 (1553)
Q Consensus 1201 ~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~ 1280 (1553)
.+++||.|.+|+||++.+. .+......|...|.++.++.+ ++++|+.|++|.+||++++++
T Consensus 303 ~~~sgs~D~tVkVW~v~n~--------------~~l~l~~~h~~~V~~v~~~~~-----~lvsgs~d~~v~VW~~~~~~c 363 (537)
T KOG0274|consen 303 LLVSGSRDNTVKVWDVTNG--------------ACLNLLRGHTGPVNCVQLDEP-----LLVSGSYDGTVKVWDPRTGKC 363 (537)
T ss_pred eEeeccCCceEEEEeccCc--------------ceEEEeccccccEEEEEecCC-----EEEEEecCceEEEEEhhhcee
Confidence 7888999999999999731 222333348889999988844 999999999999999999999
Q ss_pred cceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-cccceeeccccCCcceEEeecCCCCCccccCCCCEEE
Q 000410 1281 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL-VPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1359 (1553)
Q Consensus 1281 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~-~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~ 1359 (1553)
+.++.+ |.+.|+++.+++. ..+++|+.|++|++||++.+ .++..+.. |..-+..+.+ .+..++
T Consensus 364 l~sl~g--H~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~-h~~~v~~l~~------------~~~~Lv 427 (537)
T KOG0274|consen 364 LKSLSG--HTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQG-HTSLVSSLLL------------RDNFLV 427 (537)
T ss_pred eeeecC--CcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcC-Cccccccccc------------ccceeE
Confidence 999987 9999999999876 79999999999999999999 88888876 3334444433 356899
Q ss_pred EEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEec
Q 000410 1360 VAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1439 (1553)
Q Consensus 1360 s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1439 (1553)
+++.|+.|++||.++++|++++... +..+|.+++
T Consensus 428 s~~aD~~Ik~WD~~~~~~~~~~~~~----------------------------------------------~~~~v~~l~ 461 (537)
T KOG0274|consen 428 SSSADGTIKLWDAEEGECLRTLEGR----------------------------------------------HVGGVSALA 461 (537)
T ss_pred eccccccEEEeecccCceeeeeccC----------------------------------------------CcccEEEee
Confidence 9999999999999999999998742 112566666
Q ss_pred cCCCCeEEEccCCCeEEEEeCCCCCCceEE
Q 000410 1440 PLPGGDLLTGGTDLKIRRWDHCSPGRSYCI 1469 (1553)
Q Consensus 1440 ~sp~g~llTgg~Dg~IrlWDl~~~~~s~~~ 1469 (1553)
+. +..+++++.||++++||+.+++..+.+
T Consensus 462 ~~-~~~il~s~~~~~~~l~dl~~~~~~~~l 490 (537)
T KOG0274|consen 462 LG-KEEILCSSDDGSVKLWDLRSGTLIRTL 490 (537)
T ss_pred cC-cceEEEEecCCeeEEEecccCchhhhh
Confidence 64 457899999999999999988776644
No 455
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.90 E-value=4.2e-24 Score=242.70 Aligned_cols=248 Identities=20% Similarity=0.285 Sum_probs=183.2
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-----ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcC-CCCCeeEEEEEEEeCCE
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-----GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSI-DHPHVWAFQFWQETDKA 99 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-----~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l-~hpnIv~~~~~~~~~~~ 99 (1553)
.|..+++||.|.|+.||++.+.. ..||+|.+.... .-.++..|.++|..+ .+.||+++.+++..++.
T Consensus 37 ~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts-------~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 37 AYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTS-------SPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhccccccchhhhhhhhHhhhccccceEeeeeccccc-------CchHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 57889999999999999997643 569999986542 223467777888887 48999999999999999
Q ss_pred EEEEeccccC-CHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecC-CcEEEeecCcccccc--
Q 000410 100 AYLLRQYFFN-SLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSW-NWLYLSDFASFKPTY-- 175 (1553)
Q Consensus 100 ~~lV~E~~~g-sL~d~l~~~~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~-~~vkL~DFG~a~~~~-- 175 (1553)
..+||||++. .-.++... ++..+++++++.++.||.++|.+|||||||||.|+|.+.. +.-.|+|||++....
T Consensus 110 v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~ 186 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGY 186 (418)
T ss_pred eEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhh
Confidence 9999999995 66666654 6789999999999999999999999999999999999854 678999999986110
Q ss_pred C--------------C--C-----------CCCCCcce--------eeecCCCCccccCcchhcccCCccccccCCCCCC
Q 000410 176 I--------------P--Y-----------DDPSDFSF--------FFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKP 220 (1553)
Q Consensus 176 ~--------------~--~-----------~~~~~~~~--------~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~ 220 (1553)
. + . ..|..+.. ..-...||++|+|||++...+ ..++
T Consensus 187 ~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~---------~Qtt 257 (418)
T KOG1167|consen 187 QQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCP---------RQTT 257 (418)
T ss_pred hhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhcc---------CcCC
Confidence 0 0 0 00111111 011345899999999986432 4578
Q ss_pred cccHHHHHHHHHHHHcCCCCC-CchH----H------------HH--HHhcC---------------------------C
Q 000410 221 SMDIFAVGCVIAELFLEVPFF-ELSH----L------------LA--YRRGQ---------------------------Y 254 (1553)
Q Consensus 221 ~~DIwSlG~il~eLltg~~pf-~~~~----~------------~~--~~~~~---------------------------~ 254 (1553)
++||||.|+|+..++++..|| ...+ + .+ ...+. +
T Consensus 258 aiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~ 337 (418)
T KOG1167|consen 258 AIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIY 337 (418)
T ss_pred ccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcc
Confidence 999999999999999996665 2100 0 00 00000 0
Q ss_pred C------CCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHh
Q 000410 255 D------PSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 ~------~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~ 292 (1553)
. .........+..+.+|+.+||+.||.+|.||+++|+|
T Consensus 338 ~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 338 KSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 0 0001122334578999999999999999999999999
No 456
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=3.3e-22 Score=238.96 Aligned_cols=256 Identities=17% Similarity=0.216 Sum_probs=204.4
Q ss_pred ccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEE
Q 000410 1135 LQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMF 1214 (1553)
Q Consensus 1135 l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vw 1214 (1553)
|..-+..|.+++|+|.-.+++|+-..|.|++||-+-+. ..-.+..|.++|..++|+|....||+||+|-.|+||
T Consensus 5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~t------li~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVW 78 (1202)
T KOG0292|consen 5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGT------LIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVW 78 (1202)
T ss_pred hhcccccccceecCCCCCEEEEeecCceeeeehhhhhh------HHhhhhccCCccceeeecCCCCeEEecCCccEEEEE
Confidence 44456789999999999999999999999999998654 344678899999999999999999999999999999
Q ss_pred EeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceE
Q 000410 1215 SVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVS 1294 (1553)
Q Consensus 1215 di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~It 1294 (1553)
+... ..+.....+|-.-|..+.||+. ...++++|.|-+|++|+-.+++++..+.+ |...|.
T Consensus 79 nYk~--------------rrclftL~GHlDYVRt~~FHhe---yPWIlSASDDQTIrIWNwqsr~~iavltG--HnHYVM 139 (1202)
T KOG0292|consen 79 NYKT--------------RRCLFTLLGHLDYVRTVFFHHE---YPWILSASDDQTIRIWNWQSRKCIAVLTG--HNHYVM 139 (1202)
T ss_pred eccc--------------ceehhhhccccceeEEeeccCC---CceEEEccCCCeEEEEeccCCceEEEEec--CceEEE
Confidence 9863 1222234467788899999998 77999999999999999999999999988 777899
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCcc----------------------------cceeeccccCCcceEEeecCCC
Q 000410 1295 SLVTGPCGNWFVSGSSRGVLTLWDLRFLVP----------------------------VNSWQYSQVCPIEKMCLFVPPP 1346 (1553)
Q Consensus 1295 sl~~sp~g~~LvsGs~dG~l~lWDlr~~~~----------------------------l~s~~~~~~~~I~~l~~~~p~~ 1346 (1553)
|..|+|....++++|-|.+|++||+.-... ++-.-.+|...|+.+.| ||
T Consensus 140 cAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAf-hp-- 216 (1202)
T KOG0292|consen 140 CAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAF-HP-- 216 (1202)
T ss_pred eeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEe-cC--
Confidence 999999999999999999999999742110 11111234445555555 44
Q ss_pred CCccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccC
Q 000410 1347 NAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELN 1426 (1553)
Q Consensus 1347 ~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~ 1426 (1553)
.-+.+++|+.|..|++|.+...+ .|+..
T Consensus 217 -------TlpliVSG~DDRqVKlWrmnetK---------------------------------------------aWEvD 244 (1202)
T KOG0292|consen 217 -------TLPLIVSGADDRQVKLWRMNETK---------------------------------------------AWEVD 244 (1202)
T ss_pred -------CcceEEecCCcceeeEEEecccc---------------------------------------------ceeeh
Confidence 34689999999999999986322 23333
Q ss_pred CCCCCccCcEEeccCCCC-eEEEccCCCeEEEEeCCCCCCceEEe
Q 000410 1427 EPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCIC 1470 (1553)
Q Consensus 1427 ~~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWDl~~~~~s~~~~ 1470 (1553)
...+|...|.++.|+|.. .|++.|.|+.||+||+...+...++.
T Consensus 245 tcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfr 289 (1202)
T KOG0292|consen 245 TCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFR 289 (1202)
T ss_pred hhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeee
Confidence 445777789999999965 67799999999999998766555443
No 457
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.90 E-value=5.3e-23 Score=229.30 Aligned_cols=289 Identities=14% Similarity=0.202 Sum_probs=232.8
Q ss_pred eeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEE
Q 000410 1133 AHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIH 1212 (1553)
Q Consensus 1133 ~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~ 1212 (1553)
..+..|.+.|+.+.|-++...|+||+.|..|++|++.... .....++.+..+.|+++.|.++++++++++.|+.++
T Consensus 169 ~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k----~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r 244 (459)
T KOG0288|consen 169 FVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEK----SELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLR 244 (459)
T ss_pred hhhhccccccceeEEccCcchhhhcchhhhhhhhhcccch----hhhhhhhhccCCCcceeeecCCCceEEeecCCCcee
Confidence 4567899999999999998999999999999999987543 112335566677899999999999999999999999
Q ss_pred EEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcc
Q 000410 1213 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGY 1292 (1553)
Q Consensus 1213 vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~ 1292 (1553)
+|+++.. ..+....+|...|+++.|.-. ...+++|+.|.+|+.||+....|..++-. ...
T Consensus 245 ~Wnvd~~--------------r~~~TLsGHtdkVt~ak~~~~---~~~vVsgs~DRtiK~WDl~k~~C~kt~l~---~S~ 304 (459)
T KOG0288|consen 245 LWNVDSL--------------RLRHTLSGHTDKVTAAKFKLS---HSRVVSGSADRTIKLWDLQKAYCSKTVLP---GSQ 304 (459)
T ss_pred eeeccch--------------hhhhhhcccccceeeehhhcc---ccceeeccccchhhhhhhhhhheeccccc---ccc
Confidence 9999731 223334457888899888876 33599999999999999999888877643 345
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEc
Q 000410 1293 VSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNA 1372 (1553)
Q Consensus 1293 Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl 1372 (1553)
+..++.+ +..+++|-.|+.|++||.|...++.+.... +.|+++.. .+ +|..+.+++-|..+.+.|+
T Consensus 305 cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~g--g~vtSl~l-s~---------~g~~lLsssRDdtl~viDl 370 (459)
T KOG0288|consen 305 CNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPLG--GRVTSLDL-SM---------DGLELLSSSRDDTLKVIDL 370 (459)
T ss_pred ccceEec--ceeeeecccccceEEEeccCCceeeEeecC--cceeeEee-cc---------CCeEEeeecCCCceeeeec
Confidence 6677776 457889999999999999999988877653 37887776 33 4557888899999999999
Q ss_pred CCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccC
Q 000410 1373 ENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGT 1451 (1553)
Q Consensus 1373 ~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~ 1451 (1553)
++.+.++++...... +++ ..+.+.|+|++ ++++||.
T Consensus 371 Rt~eI~~~~sA~g~k-----------------------------------------~as--DwtrvvfSpd~~YvaAGS~ 407 (459)
T KOG0288|consen 371 RTKEIRQTFSAEGFK-----------------------------------------CAS--DWTRVVFSPDGSYVAAGSA 407 (459)
T ss_pred ccccEEEEeeccccc-----------------------------------------ccc--ccceeEECCCCceeeeccC
Confidence 999988888743321 111 26778899999 6669999
Q ss_pred CCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCcc-ceeEE
Q 000410 1452 DLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRD-SILSL 1530 (1553)
Q Consensus 1452 Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d-~I~~v 1530 (1553)
||.|++|++.+++.-++++++ |.+ .|+++
T Consensus 408 dgsv~iW~v~tgKlE~~l~~s--------------------------------------------------~s~~aI~s~ 437 (459)
T KOG0288|consen 408 DGSVYIWSVFTGKLEKVLSLS--------------------------------------------------TSNAAITSL 437 (459)
T ss_pred CCcEEEEEccCceEEEEeccC--------------------------------------------------CCCcceEEE
Confidence 999999999998887777753 233 79999
Q ss_pred eeeecCCcEEEEEcCCceEEEcC
Q 000410 1531 GSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1531 a~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
.|++.|..|+++|+++.+.+|.
T Consensus 438 -~W~~sG~~Llsadk~~~v~lW~ 459 (459)
T KOG0288|consen 438 -SWNPSGSGLLSADKQKAVTLWT 459 (459)
T ss_pred -EEcCCCchhhcccCCcceEecC
Confidence 7999999999999999999995
No 458
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90 E-value=3.7e-22 Score=209.88 Aligned_cols=283 Identities=20% Similarity=0.264 Sum_probs=209.2
Q ss_pred eEEEEcC--CCCE-EEEEe-----CCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecC-CcEEEEEeCCCcEEE
Q 000410 1143 NEIAISH--DHSF-FVSAS-----DDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH-SAQVVVGACDGIIHM 1213 (1553)
Q Consensus 1143 ~~l~~sp--d~~~-laSgS-----~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~-~~~las~s~DG~I~v 1213 (1553)
+++.||| ++++ +||+. ..|++.|-++.+..... ..+.|.-..+ +.+++|+++ .+.+++|+.||++++
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~---e~~s~d~~D~-LfdV~Wse~~e~~~~~a~GDGSLrl 87 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQ---ECQSYDTEDG-LFDVAWSENHENQVIAASGDGSLRL 87 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeE---EEEeeecccc-eeEeeecCCCcceEEEEecCceEEE
Confidence 5778888 4443 33333 46889999987443222 2334544444 999999985 678889999999999
Q ss_pred EEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcce
Q 000410 1214 FSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYV 1293 (1553)
Q Consensus 1214 wdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~I 1293 (1553)
||..... ..+.. ..+|...|.++.|++.. ...+++++.|++|++||...+.-+.++.+ |...|
T Consensus 88 ~d~~~~s------------~Pi~~-~kEH~~EV~Svdwn~~~--r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~g--h~~~I 150 (311)
T KOG0277|consen 88 FDLTMPS------------KPIHK-FKEHKREVYSVDWNTVR--RRIFLTSSWDGTIKLWDPNRPNSVQTFNG--HNSCI 150 (311)
T ss_pred eccCCCC------------cchhH-HHhhhhheEEecccccc--ceeEEeeccCCceEeecCCCCcceEeecC--CccEE
Confidence 9964211 12222 33566778888999874 56888889999999999999999999877 89999
Q ss_pred EEEEEcC-CCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEc
Q 000410 1294 SSLVTGP-CGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNA 1372 (1553)
Q Consensus 1294 tsl~~sp-~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl 1372 (1553)
...+|+| .++.++++|.||++++||+|..-....+.. |...|.++.| +. .+.+.+++|+.|+.|+.||+
T Consensus 151 y~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~a-h~~Eil~cdw-~k--------y~~~vl~Tg~vd~~vr~wDi 220 (311)
T KOG0277|consen 151 YQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEA-HNSEILCCDW-SK--------YNHNVLATGGVDNLVRGWDI 220 (311)
T ss_pred EEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEe-ccceeEeecc-cc--------cCCcEEEecCCCceEEEEeh
Confidence 9999999 568999999999999999997644444444 5567777777 22 23468999999999999999
Q ss_pred CCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC--eEEEcc
Q 000410 1373 ENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG--DLLTGG 1450 (1553)
Q Consensus 1373 ~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g--~llTgg 1450 (1553)
++.+.. ++ +..+|...||.+.|+|.. .|+|++
T Consensus 221 r~~r~p-l~---------------------------------------------eL~gh~~AVRkvk~Sph~~~lLaSas 254 (311)
T KOG0277|consen 221 RNLRTP-LF---------------------------------------------ELNGHGLAVRKVKFSPHHASLLASAS 254 (311)
T ss_pred hhcccc-ce---------------------------------------------eecCCceEEEEEecCcchhhHhhhcc
Confidence 865410 00 012455579999999976 677999
Q ss_pred CCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEE
Q 000410 1451 TDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSL 1530 (1553)
Q Consensus 1451 ~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~v 1530 (1553)
.|.++|+||...+.... +....|++-|.++
T Consensus 255 YDmT~riw~~~~~ds~~--------------------------------------------------e~~~~HtEFv~g~ 284 (311)
T KOG0277|consen 255 YDMTVRIWDPERQDSAI--------------------------------------------------ETVDHHTEFVCGL 284 (311)
T ss_pred ccceEEecccccchhhh--------------------------------------------------hhhhccceEEecc
Confidence 99999999987543211 0111388999998
Q ss_pred eeeecC-CcEEEEEcCCceEEEcC
Q 000410 1531 GSVKLN-QRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1531 a~~~~~-~~~LvSas~DG~IkVWk 1553 (1553)
.|+.- ...+|+++.|+.++||.
T Consensus 285 -Dws~~~~~~vAs~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 285 -DWSLFDPGQVASTGWDELLYVWN 307 (311)
T ss_pred -ccccccCceeeecccccceeeec
Confidence 67664 77899999999999995
No 459
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.90 E-value=4.2e-23 Score=215.86 Aligned_cols=254 Identities=17% Similarity=0.251 Sum_probs=198.7
Q ss_pred cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEe
Q 000410 1127 PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA 1206 (1553)
Q Consensus 1127 p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s 1206 (1553)
..|--|.+|.||+++|.+.....+...-|||++|=|.||||.-++.... .-.|...|.+++|+.+.+.|++|+
T Consensus 47 ~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelh-------sf~hkhivk~~af~~ds~~lltgg 119 (334)
T KOG0278|consen 47 DTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELH-------SFEHKHIVKAVAFSQDSNYLLTGG 119 (334)
T ss_pred CCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhh-------hhhhhheeeeEEecccchhhhccc
Confidence 4477799999999999999999888899999999999999998876322 224566699999999999999999
Q ss_pred CCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceecc
Q 000410 1207 CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA 1286 (1553)
Q Consensus 1207 ~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~ 1286 (1553)
.+..++|||++.... ....+. .|...|..+-|... .+.+++++.|++|++||.|+|..+.+++.
T Consensus 120 ~ekllrvfdln~p~A------------pp~E~~-ghtg~Ir~v~wc~e---D~~iLSSadd~tVRLWD~rTgt~v~sL~~ 183 (334)
T KOG0278|consen 120 QEKLLRVFDLNRPKA------------PPKEIS-GHTGGIRTVLWCHE---DKCILSSADDKTVRLWDHRTGTEVQSLEF 183 (334)
T ss_pred hHHHhhhhhccCCCC------------Cchhhc-CCCCcceeEEEecc---CceEEeeccCCceEEEEeccCcEEEEEec
Confidence 999999999974221 111122 23334444445554 34788889999999999999999999986
Q ss_pred CCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCe
Q 000410 1287 IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNE 1366 (1553)
Q Consensus 1287 ~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~ 1366 (1553)
...|+|+-++++|++|.++ ..+.|.+||......+++...+- .|++..+ +|.. ..+++|+.|..
T Consensus 184 ---~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~k~P~--nV~SASL-~P~k---------~~fVaGged~~ 247 (334)
T KOG0278|consen 184 ---NSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSYKMPC--NVESASL-HPKK---------EFFVAGGEDFK 247 (334)
T ss_pred ---CCCCcceeeccCCCEEEEe-cCceeEEeccccccceeeccCcc--ccccccc-cCCC---------ceEEecCcceE
Confidence 5579999999999887665 45679999999999999887653 4555555 5543 46778888999
Q ss_pred EEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCCeE
Q 000410 1367 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDL 1446 (1553)
Q Consensus 1367 V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~l 1446 (1553)
+..||+.+|+.+..+. .+|..+|.|+.|+|+|.+
T Consensus 248 ~~kfDy~TgeEi~~~n----------------------------------------------kgh~gpVhcVrFSPdGE~ 281 (334)
T KOG0278|consen 248 VYKFDYNTGEEIGSYN----------------------------------------------KGHFGPVHCVRFSPDGEL 281 (334)
T ss_pred EEEEeccCCceeeecc----------------------------------------------cCCCCceEEEEECCCCce
Confidence 9999999998655531 245558999999999965
Q ss_pred E-EccCCCeEEEEeCCCCCC
Q 000410 1447 L-TGGTDLKIRRWDHCSPGR 1465 (1553)
Q Consensus 1447 l-Tgg~Dg~IrlWDl~~~~~ 1465 (1553)
. +|+.||+||+|.+.-+..
T Consensus 282 yAsGSEDGTirlWQt~~~~~ 301 (334)
T KOG0278|consen 282 YASGSEDGTIRLWQTTPGKT 301 (334)
T ss_pred eeccCCCceEEEEEecCCCc
Confidence 5 999999999999865443
No 460
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.89 E-value=3.1e-22 Score=207.98 Aligned_cols=224 Identities=17% Similarity=0.213 Sum_probs=181.0
Q ss_pred CCcccC-ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcE
Q 000410 1123 SGWRPR-GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQ 1201 (1553)
Q Consensus 1123 ~~W~p~-G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~ 1201 (1553)
.+|+|. |.|+.+..+|...|..++.+.|+..|++|+.|..|.+||+.++. ....+.+|.+.|+.+.|.+....
T Consensus 42 rLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~TGk------v~Rr~rgH~aqVNtV~fNeesSV 115 (307)
T KOG0316|consen 42 RLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVNTGK------VDRRFRGHLAQVNTVRFNEESSV 115 (307)
T ss_pred EeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcccCe------eeeecccccceeeEEEecCcceE
Confidence 589965 99999999999999999999999999999999999999999986 44567899999999999999999
Q ss_pred EEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCccc
Q 000410 1202 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1281 (1553)
Q Consensus 1202 las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~ 1281 (1553)
+++||.|.++++||.+... ...+...+. ....|.++..+.. .|++|+.||+++.||+|.|+..
T Consensus 116 v~SgsfD~s~r~wDCRS~s-----------~ePiQilde-a~D~V~Si~v~~h-----eIvaGS~DGtvRtydiR~G~l~ 178 (307)
T KOG0316|consen 116 VASGSFDSSVRLWDCRSRS-----------FEPIQILDE-AKDGVSSIDVAEH-----EIVAGSVDGTVRTYDIRKGTLS 178 (307)
T ss_pred EEeccccceeEEEEcccCC-----------CCccchhhh-hcCceeEEEeccc-----EEEeeccCCcEEEEEeecceee
Confidence 9999999999999998411 122222222 2334555555543 8999999999999999999876
Q ss_pred ceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEE
Q 000410 1282 WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVA 1361 (1553)
Q Consensus 1282 ~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~ 1361 (1553)
...- ..+|+|++|+++++..+.|+.+++|++-|-.+++.++++.. |...-.++..+- ......+++|
T Consensus 179 sDy~----g~pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkG-hkn~eykldc~l--------~qsdthV~sg 245 (307)
T KOG0316|consen 179 SDYF----GHPITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKG-HKNMEYKLDCCL--------NQSDTHVFSG 245 (307)
T ss_pred hhhc----CCcceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcc-cccceeeeeeee--------cccceeEEec
Confidence 6553 35799999999999999999999999999999999999886 333333333311 1123479999
Q ss_pred EcCCeEEEEEcCCCcEEEEEe
Q 000410 1362 AGCNEVSLWNAENGSCHQVLR 1382 (1553)
Q Consensus 1362 s~dg~V~vWDl~tg~~~~~l~ 1382 (1553)
+.||.|.+||+........+.
T Consensus 246 SEDG~Vy~wdLvd~~~~sk~~ 266 (307)
T KOG0316|consen 246 SEDGKVYFWDLVDETQISKLS 266 (307)
T ss_pred cCCceEEEEEeccceeeeeec
Confidence 999999999999877655554
No 461
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=99.89 E-value=1.7e-21 Score=225.16 Aligned_cols=253 Identities=25% Similarity=0.388 Sum_probs=204.5
Q ss_pred CcccC-ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEE
Q 000410 1124 GWRPR-GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV 1202 (1553)
Q Consensus 1124 ~W~p~-G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~l 1202 (1553)
.|+.. +.....+.+|...|..+.|+|+++++++|+.||.|++||+.+.+ ....+..|...|.++.|.++++.+
T Consensus 35 i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~ 108 (289)
T cd00200 35 VWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGE------CVRTLTGHTSYVSSVAFSPDGRIL 108 (289)
T ss_pred EEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCccc------ceEEEeccCCcEEEEEEcCCCCEE
Confidence 57643 55778889999999999999999999999999999999998753 334556777789999999998888
Q ss_pred EEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccc
Q 000410 1203 VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTW 1282 (1553)
Q Consensus 1203 as~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~ 1282 (1553)
++++.||.|++|++.... ..... ..+...+.++.|+|+ +.++++++.+|.|++||+++++...
T Consensus 109 ~~~~~~~~i~~~~~~~~~-------------~~~~~-~~~~~~i~~~~~~~~---~~~l~~~~~~~~i~i~d~~~~~~~~ 171 (289)
T cd00200 109 SSSSRDKTIKVWDVETGK-------------CLTTL-RGHTDWVNSVAFSPD---GTFVASSSQDGTIKLWDLRTGKCVA 171 (289)
T ss_pred EEecCCCeEEEEECCCcE-------------EEEEe-ccCCCcEEEEEEcCc---CCEEEEEcCCCcEEEEEccccccce
Confidence 888889999999996211 11111 145567888999997 5688888889999999999988888
Q ss_pred eeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEE
Q 000410 1283 TLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA 1362 (1553)
Q Consensus 1283 ~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s 1362 (1553)
.+.. |.+.+++++|+|+++.+++|+.+|.+++||++.+..+..+.. +..++..+.+ +|. +.++++++
T Consensus 172 ~~~~--~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~-~~~---------~~~~~~~~ 238 (289)
T cd00200 172 TLTG--HTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRG-HENGVNSVAF-SPD---------GYLLASGS 238 (289)
T ss_pred eEec--CccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhh-cCCceEEEEE-cCC---------CcEEEEEc
Confidence 7764 777999999999999999999999999999998888777643 4557888877 543 34677777
Q ss_pred cCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCC
Q 000410 1363 GCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP 1442 (1553)
Q Consensus 1363 ~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp 1442 (1553)
.++.|.+||+.+++....+.. +...|.++.|++
T Consensus 239 ~~~~i~i~~~~~~~~~~~~~~-----------------------------------------------~~~~i~~~~~~~ 271 (289)
T cd00200 239 EDGTIRVWDLRTGECVQTLSG-----------------------------------------------HTNSVTSLAWSP 271 (289)
T ss_pred CCCcEEEEEcCCceeEEEccc-----------------------------------------------cCCcEEEEEECC
Confidence 799999999998776655541 122689999999
Q ss_pred CC-eEEEccCCCeEEEEe
Q 000410 1443 GG-DLLTGGTDLKIRRWD 1459 (1553)
Q Consensus 1443 ~g-~llTgg~Dg~IrlWD 1459 (1553)
++ .+++++.|+.|++||
T Consensus 272 ~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 272 DGKRLASGSADGTIRIWD 289 (289)
T ss_pred CCCEEEEecCCCeEEecC
Confidence 86 777999999999996
No 462
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=99.89 E-value=5.3e-22 Score=219.40 Aligned_cols=275 Identities=18% Similarity=0.221 Sum_probs=210.9
Q ss_pred CCCcccCccEeeeccccccCeeEEEEcC-C--CCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecC
Q 000410 1122 DSGWRPRGILVAHLQEHCSAVNEIAISH-D--HSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH 1198 (1553)
Q Consensus 1122 ~~~W~p~G~lv~~l~~H~~~V~~l~~sp-d--~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~ 1198 (1553)
-..|+..|+.+.++.||.++|.+++|.- + ...|+|||.|.++++|.++.++.... ......+|...|-++...++
T Consensus 127 ~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~~~~--~~~~~~GHk~~V~sVsv~~s 204 (423)
T KOG0313|consen 127 SRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGENKVK--ALKVCRGHKRSVDSVSVDSS 204 (423)
T ss_pred eEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchhhhh--HHhHhcccccceeEEEecCC
Confidence 3579999999999999999999988843 2 23799999999999999987663322 22233489999999999999
Q ss_pred CcEEEEEeCCCcEEEEEeeecccCC---------C--ccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCC
Q 000410 1199 SAQVVVGACDGIIHMFSVDHISRGL---------G--NVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQN 1267 (1553)
Q Consensus 1199 ~~~las~s~DG~I~vwdi~~~~~~~---------~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~d 1267 (1553)
|..|++||.|.+|.||+.....-.. + ...+..+.........+|..+|..+.|++. ..++++++|
T Consensus 205 gtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w~d~----~v~yS~SwD 280 (423)
T KOG0313|consen 205 GTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVWSDA----TVIYSVSWD 280 (423)
T ss_pred CCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEEcCC----CceEeeccc
Confidence 9999999999999999943210000 0 001111222222334567889999999885 289999999
Q ss_pred ceEEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcc--cceeeccccCCcceEEeecCC
Q 000410 1268 CGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVP--VNSWQYSQVCPIEKMCLFVPP 1345 (1553)
Q Consensus 1268 g~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~--l~s~~~~~~~~I~~l~~~~p~ 1345 (1553)
.+|+.||+.++.+..++.. ....+|+.++|..+.|++|++|..+++||-|.+.. +..--..|...|..+.| +|.
T Consensus 281 HTIk~WDletg~~~~~~~~---~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH~nwVssvkw-sp~ 356 (423)
T KOG0313|consen 281 HTIKVWDLETGGLKSTLTT---NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGHKNWVSSVKW-SPT 356 (423)
T ss_pred ceEEEEEeecccceeeeec---CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecchhhhhheec-CCC
Confidence 9999999999999988875 56799999999999999999999999999998632 22212346678888888 665
Q ss_pred CCCccccCCCCEEEEEEcCCeEEEEEcCCCc-EEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccc
Q 000410 1346 PNAAVSTTARPLIYVAAGCNEVSLWNAENGS-CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDE 1424 (1553)
Q Consensus 1346 ~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 1424 (1553)
.. ..+++|+.|+.+++||+++.. .+..+.
T Consensus 357 ~~--------~~~~S~S~D~t~klWDvRS~k~plydI~------------------------------------------ 386 (423)
T KOG0313|consen 357 NE--------FQLVSGSYDNTVKLWDVRSTKAPLYDIA------------------------------------------ 386 (423)
T ss_pred Cc--------eEEEEEecCCeEEEEEeccCCCcceeec------------------------------------------
Confidence 43 578999999999999998654 333333
Q ss_pred cCCCCCCccCcEEeccCCCCeEEEccCCCeEEEEeCC
Q 000410 1425 LNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1425 l~~~~~~~~~V~sl~~sp~g~llTgg~Dg~IrlWDl~ 1461 (1553)
+|...|.++.|...+.|+|||.|.+||++.-.
T Consensus 387 -----~h~DKvl~vdW~~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 387 -----GHNDKVLSVDWNEGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred -----cCCceEEEEeccCCceEEeccCcceEEEeccc
Confidence 23336899999888899999999999998743
No 463
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=99.89 E-value=7.2e-22 Score=217.58 Aligned_cols=255 Identities=15% Similarity=0.211 Sum_probs=201.5
Q ss_pred Ccc-cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEE
Q 000410 1124 GWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQV 1202 (1553)
Q Consensus 1124 ~W~-p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~l 1202 (1553)
.|+ .+|.....+.||++.|+++.||.||.++|||.-+|.|+||+..++. ....+......|.-+.|+|-++.|
T Consensus 90 lW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~------~~~~~~~e~~dieWl~WHp~a~il 163 (399)
T KOG0296|consen 90 LWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGG------EQWKLDQEVEDIEWLKWHPRAHIL 163 (399)
T ss_pred EEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCc------eEEEeecccCceEEEEecccccEE
Confidence 688 5588999999999999999999999999999999999999999875 233333344558889999999999
Q ss_pred EEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccc
Q 000410 1203 VVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTW 1282 (1553)
Q Consensus 1203 as~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~ 1282 (1553)
++|+.||++.+|.+... ...+...+|...+++=.|.|+ |+.++++..||+|++||+.+++...
T Consensus 164 lAG~~DGsvWmw~ip~~--------------~~~kv~~Gh~~~ct~G~f~pd---GKr~~tgy~dgti~~Wn~ktg~p~~ 226 (399)
T KOG0296|consen 164 LAGSTDGSVWMWQIPSQ--------------ALCKVMSGHNSPCTCGEFIPD---GKRILTGYDDGTIIVWNPKTGQPLH 226 (399)
T ss_pred EeecCCCcEEEEECCCc--------------ceeeEecCCCCCcccccccCC---CceEEEEecCceEEEEecCCCceeE
Confidence 99999999999999731 122334457778888899999 8899999999999999999987665
Q ss_pred eeccC-------------------------------------------------CCCcceEEEEEcCCC---CEEEEEeC
Q 000410 1283 TLKAI-------------------------------------------------PEEGYVSSLVTGPCG---NWFVSGSS 1310 (1553)
Q Consensus 1283 ~l~~~-------------------------------------------------~h~g~Itsl~~sp~g---~~LvsGs~ 1310 (1553)
.+... .+...+.|+.+.|.. ...++|+-
T Consensus 227 ~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~v 306 (399)
T KOG0296|consen 227 KITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSV 306 (399)
T ss_pred EecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccc
Confidence 55410 001112233333322 45688999
Q ss_pred CCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCC
Q 000410 1311 RGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDT 1390 (1553)
Q Consensus 1311 dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~ 1390 (1553)
||+|.|||+.....-.... |..+|.++.| .+ ..++++++.+|.|+.||.++|+++.++.++
T Consensus 307 dG~i~iyD~a~~~~R~~c~--he~~V~~l~w-~~----------t~~l~t~c~~g~v~~wDaRtG~l~~~y~GH------ 367 (399)
T KOG0296|consen 307 DGTIAIYDLAASTLRHICE--HEDGVTKLKW-LN----------TDYLLTACANGKVRQWDARTGQLKFTYTGH------ 367 (399)
T ss_pred cceEEEEecccchhheecc--CCCceEEEEE-cC----------cchheeeccCceEEeeeccccceEEEEecC------
Confidence 9999999998777666555 4456999988 43 247999999999999999999999998744
Q ss_pred ccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccCCCeEEEEeCC
Q 000410 1391 EMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1391 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWDl~ 1461 (1553)
..+|.+++.+|++ +++|+|.|++.+++++.
T Consensus 368 -----------------------------------------~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 368 -----------------------------------------QMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred -----------------------------------------chheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 3479999999998 56699999999999864
No 464
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.89 E-value=1e-21 Score=262.15 Aligned_cols=278 Identities=14% Similarity=0.153 Sum_probs=203.1
Q ss_pred CCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceecc
Q 000410 1160 DSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKD 1239 (1553)
Q Consensus 1160 DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~ 1239 (1553)
+|.+++|+..+.......+ ......|.+.|++++|+++++.+|+|+.||+|+||+...... .+....+ .. ..
T Consensus 457 ~gl~~~~~~~~~~~~~~~~-~~~~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~-~~~~~~~----~~--~~ 528 (793)
T PLN00181 457 EGLCKYLSFSKLRVKADLK-QGDLLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIK-DGRDIHY----PV--VE 528 (793)
T ss_pred hhhhhhhcccceEEEEeec-cccccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccc-ccccccc----ce--EE
Confidence 6778888887654211111 112345788899999999999999999999999999853110 0000000 01 11
Q ss_pred cCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEEEcC-CCCEEEEEeCCCcEEEEe
Q 000410 1240 TKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGP-CGNWFVSGSSRGVLTLWD 1318 (1553)
Q Consensus 1240 ~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp-~g~~LvsGs~dG~l~lWD 1318 (1553)
..+...+..++|++.. +.+|++++.||.|++||+.+++.+..+.. |.+.|++++|+| ++.+|++|+.||+|++||
T Consensus 529 ~~~~~~v~~l~~~~~~--~~~las~~~Dg~v~lWd~~~~~~~~~~~~--H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd 604 (793)
T PLN00181 529 LASRSKLSGICWNSYI--KSQVASSNFEGVVQVWDVARSQLVTEMKE--HEKRVWSIDYSSADPTLLASGSDDGSVKLWS 604 (793)
T ss_pred ecccCceeeEEeccCC--CCEEEEEeCCCeEEEEECCCCeEEEEecC--CCCCEEEEEEcCCCCCEEEEEcCCCEEEEEE
Confidence 1223467778898753 45899999999999999999988888765 889999999997 789999999999999999
Q ss_pred CCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcE-EEEEecccCCCCCccCCCcc
Q 000410 1319 LRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSC-HQVLRTANYDGDTEMSDLPW 1397 (1553)
Q Consensus 1319 lr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~-~~~l~~~~~~~~~~~~~~~~ 1397 (1553)
++.+..+..+.. ...+.++.| .+ .++.++++|+.||.|++||++++.. ...+.
T Consensus 605 ~~~~~~~~~~~~--~~~v~~v~~-~~--------~~g~~latgs~dg~I~iwD~~~~~~~~~~~~--------------- 658 (793)
T PLN00181 605 INQGVSIGTIKT--KANICCVQF-PS--------ESGRSLAFGSADHKVYYYDLRNPKLPLCTMI--------------- 658 (793)
T ss_pred CCCCcEEEEEec--CCCeEEEEE-eC--------CCCCEEEEEeCCCeEEEEECCCCCccceEec---------------
Confidence 999888877764 246777766 22 2356899999999999999986542 22221
Q ss_pred cccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCCeEEEccCCCeEEEEeCCCCCCceEEeCCCCCCC
Q 000410 1398 AFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGV 1477 (1553)
Q Consensus 1398 ~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~ 1477 (1553)
+|...|.++.|.++..++||+.|+.|++||+..+.. +.. .
T Consensus 659 --------------------------------~h~~~V~~v~f~~~~~lvs~s~D~~ikiWd~~~~~~-----~~~--~- 698 (793)
T PLN00181 659 --------------------------------GHSKTVSYVRFVDSSTLVSSSTDNTLKLWDLSMSIS-----GIN--E- 698 (793)
T ss_pred --------------------------------CCCCCEEEEEEeCCCEEEEEECCCEEEEEeCCCCcc-----ccC--C-
Confidence 233478999998666899999999999999874321 000 0
Q ss_pred CCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1478 GNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1478 ~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
. ......+|...|+.+ .|++++.+|++|+.||.|+||+
T Consensus 699 --~-----------------------------------~l~~~~gh~~~i~~v-~~s~~~~~lasgs~D~~v~iw~ 736 (793)
T PLN00181 699 --T-----------------------------------PLHSFMGHTNVKNFV-GLSVSDGYIATGSETNEVFVYH 736 (793)
T ss_pred --c-----------------------------------ceEEEcCCCCCeeEE-EEcCCCCEEEEEeCCCEEEEEE
Confidence 0 000123488899999 6999999999999999999995
No 465
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.89 E-value=3.2e-22 Score=225.46 Aligned_cols=198 Identities=26% Similarity=0.298 Sum_probs=166.7
Q ss_pred eEEEEEeeccCcEEEEEEEECC--ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEeCCEEEEEe
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLLR 104 (1553)
Q Consensus 27 y~~~~~LG~G~fg~V~~a~~~~--~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~~~~~~~~lV~ 104 (1553)
|.+.+.||.|+++.||++.+.+ ..+++|.+...... ...+.+.+|.+.++.++|+|++++++++......++++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 76 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE----KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVM 76 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch----HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEE
Confidence 4678999999999999999975 67999999765221 24567788889999999999999999999989999999
Q ss_pred ccccC-CHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCC
Q 000410 105 QYFFN-SLRDRLSTPPF-LSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 105 E~~~g-sL~d~l~~~~~-l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~ 182 (1553)
||+++ +|.+++..... +++..+..++.|++.+|.+||++|++|+||+|.||+++.++.++|+|||.+.....+.. .
T Consensus 77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~--~ 154 (225)
T smart00221 77 EYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLA--A 154 (225)
T ss_pred eccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCccc--c
Confidence 99996 99999987666 89999999999999999999999999999999999999999999999998876533220 0
Q ss_pred CcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCc
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFEL 243 (1553)
Q Consensus 183 ~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~ 243 (1553)
......++..|++||.+. ....++.++|+|++|+++++|++|++||+.
T Consensus 155 ----~~~~~~~~~~~~~pe~~~---------~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 ----LLKTVKGTPFYLAPEVLL---------GGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ----cccceeccCCcCCHhHhc---------CCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 112234567799999763 234667799999999999999999999976
No 466
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=99.89 E-value=5.2e-22 Score=210.06 Aligned_cols=288 Identities=16% Similarity=0.211 Sum_probs=208.3
Q ss_pred CCCCCCcccccCCCCCCccc-CccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecC
Q 000410 1108 LTGLPSFVRTSSIPDSGWRP-RGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLE 1186 (1553)
Q Consensus 1108 ~~g~~~~~~~~~~~~~~W~p-~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h 1186 (1553)
.+|.-.|..+....+..|.. .|..+.++.||+++|+||..+.+.+.++|||+|.++|+||+.++. ...++..
T Consensus 20 ~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk------~la~~k~- 92 (327)
T KOG0643|consen 20 REGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGK------QLATWKT- 92 (327)
T ss_pred CCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCc------EEEEeec-
Confidence 34444444443445678984 899999999999999999999999999999999999999999986 3333333
Q ss_pred CCceEEEEEecCCcEEEEEeCC-----CcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEE
Q 000410 1187 GSRALCTMMLRHSAQVVVGACD-----GIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMF 1261 (1553)
Q Consensus 1187 ~~~I~~l~f~~~~~~las~s~D-----G~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l 1261 (1553)
...|..+.|+.+|+.++.++++ +.|.++|++.... .......+.+....+ ..+..+-|.|- ++.|
T Consensus 93 ~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~------~~~s~ep~~kI~t~~-skit~a~Wg~l---~~~i 162 (327)
T KOG0643|consen 93 NSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSS------DIDSEEPYLKIPTPD-SKITSALWGPL---GETI 162 (327)
T ss_pred CCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChh------hhcccCceEEecCCc-cceeeeeeccc---CCEE
Confidence 3459999999999998887765 6799999973221 011111233333333 45566679998 7799
Q ss_pred EEEeCCceEEEEeCCCCccc-ceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEE
Q 000410 1262 MYSTQNCGIHLWDTRSNSNT-WTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMC 1340 (1553)
Q Consensus 1262 ~~~s~dg~I~iwDlrt~~~~-~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~ 1340 (1553)
++|..+|.|..||+++|... ..-+. |...|+++++++|..++++|+.|.+-++||.++...++++.. ..|+++..
T Consensus 163 i~Ghe~G~is~~da~~g~~~v~s~~~--h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~Kty~t--e~PvN~aa 238 (327)
T KOG0643|consen 163 IAGHEDGSISIYDARTGKELVDSDEE--HSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLKTYTT--ERPVNTAA 238 (327)
T ss_pred EEecCCCcEEEEEcccCceeeechhh--hccccccccccCCcceEEecccCccceeeeccceeeEEEeee--ccccccee
Confidence 99999999999999998543 44443 777999999999999999999999999999999999998875 45777777
Q ss_pred eecCCCCCccccCCCCEEEEEEcCCe--EEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccc
Q 000410 1341 LFVPPPNAAVSTTARPLIYVAAGCNE--VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQ 1418 (1553)
Q Consensus 1341 ~~~p~~~~~~~s~~~~~l~s~s~dg~--V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 1418 (1553)
+ .|.. ..++.|++... |+-=+.+.|+ |. .+.-.
T Consensus 239 i-sP~~---------d~VilgGGqeA~dVTTT~~r~GK----FE-------------------------------ArFyh 273 (327)
T KOG0643|consen 239 I-SPLL---------DHVILGGGQEAMDVTTTSTRAGK----FE-------------------------------ARFYH 273 (327)
T ss_pred c-cccc---------ceEEecCCceeeeeeeecccccc----hh-------------------------------hhHHH
Confidence 7 5544 35666655321 2211111111 00 00001
Q ss_pred cccccccCCCCCCccCcEEeccCCCCeEE-EccCCCeEEEEeCC
Q 000410 1419 KYRVDELNEPPPRLLGIRSLLPLPGGDLL-TGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1419 ~~~~~~l~~~~~~~~~V~sl~~sp~g~ll-Tgg~Dg~IrlWDl~ 1461 (1553)
..-.+++....+|-++|++++|+|+|... +||.||.||+.-+.
T Consensus 274 ~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~Fd 317 (327)
T KOG0643|consen 274 LIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHFD 317 (327)
T ss_pred HHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEec
Confidence 11124555667888899999999999655 99999999998654
No 467
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.89 E-value=1.6e-20 Score=204.94 Aligned_cols=260 Identities=17% Similarity=0.236 Sum_probs=201.7
Q ss_pred eeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeC--CC
Q 000410 1132 VAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC--DG 1209 (1553)
Q Consensus 1132 v~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~--DG 1209 (1553)
.+.|.+-.+.|+++.|+++|.++++++.|.+++|+|+.++. ...+...+...+..++|....+.++.++. |.
T Consensus 7 ak~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~------~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~ 80 (311)
T KOG1446|consen 7 AKVFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGK------QVKTINSKKYGVDLACFTHHSNTVIHSSTKEDD 80 (311)
T ss_pred ccccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCc------eeeEeecccccccEEEEecCCceEEEccCCCCC
Confidence 44566677899999999999999999999999999999876 23344445445888999888888888876 88
Q ss_pred cEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCC
Q 000410 1210 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE 1289 (1553)
Q Consensus 1210 ~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h 1289 (1553)
+||..++.+ ....++..+|...|..++.+|. +..+++++.|++|++||+|..+|...+..
T Consensus 81 tIryLsl~d--------------NkylRYF~GH~~~V~sL~~sP~---~d~FlS~S~D~tvrLWDlR~~~cqg~l~~--- 140 (311)
T KOG1446|consen 81 TIRYLSLHD--------------NKYLRYFPGHKKRVNSLSVSPK---DDTFLSSSLDKTVRLWDLRVKKCQGLLNL--- 140 (311)
T ss_pred ceEEEEeec--------------CceEEEcCCCCceEEEEEecCC---CCeEEecccCCeEEeeEecCCCCceEEec---
Confidence 999999874 1345677889999999999998 56999999999999999999888777654
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC--cccceeecc--ccCCcceEEeecCCCCCccccCCCCEEEEEEcCC
Q 000410 1290 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL--VPVNSWQYS--QVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN 1365 (1553)
Q Consensus 1290 ~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~--~~l~s~~~~--~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg 1365 (1553)
..-...+|||.|-.+++|...+.|+++|+|.. .+..++... .....+ .+.|+++|+.++.+...+
T Consensus 141 -~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~----------~l~FS~dGK~iLlsT~~s 209 (311)
T KOG1446|consen 141 -SGRPIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWT----------DLEFSPDGKSILLSTNAS 209 (311)
T ss_pred -CCCcceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCcccee----------eeEEcCCCCEEEEEeCCC
Confidence 23446799999999999998889999999953 333333332 112233 344577788999999999
Q ss_pred eEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-
Q 000410 1366 EVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG- 1444 (1553)
Q Consensus 1366 ~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g- 1444 (1553)
.+.+.|.-+|..+..+........ .--+..|.|++
T Consensus 210 ~~~~lDAf~G~~~~tfs~~~~~~~--------------------------------------------~~~~a~ftPds~ 245 (311)
T KOG1446|consen 210 FIYLLDAFDGTVKSTFSGYPNAGN--------------------------------------------LPLSATFTPDSK 245 (311)
T ss_pred cEEEEEccCCcEeeeEeeccCCCC--------------------------------------------cceeEEECCCCc
Confidence 999999999998777764322110 01355678999
Q ss_pred eEEEccCCCeEEEEeCCCCCCceEEeCC
Q 000410 1445 DLLTGGTDLKIRRWDHCSPGRSYCICGP 1472 (1553)
Q Consensus 1445 ~llTgg~Dg~IrlWDl~~~~~s~~~~g~ 1472 (1553)
++++|++||+|.+|+++++.......|+
T Consensus 246 Fvl~gs~dg~i~vw~~~tg~~v~~~~~~ 273 (311)
T KOG1446|consen 246 FVLSGSDDGTIHVWNLETGKKVAVLRGP 273 (311)
T ss_pred EEEEecCCCcEEEEEcCCCcEeeEecCC
Confidence 6779999999999999888776655553
No 468
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.88 E-value=1.7e-21 Score=241.64 Aligned_cols=299 Identities=15% Similarity=0.199 Sum_probs=220.6
Q ss_pred ccCeeEEEEcCCCCEEEEEe--CCCcEEEEeCCCCc-----cccc-cccceeeecCCCceEEEEEecCCcEEEEEeCCCc
Q 000410 1139 CSAVNEIAISHDHSFFVSAS--DDSTVKVWDSRKLE-----KDIS-FRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGI 1210 (1553)
Q Consensus 1139 ~~~V~~l~~spd~~~laSgS--~DGtVkIWD~~~~~-----~~~~-~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~ 1210 (1553)
...|.+|.++|||..||||+ .||.++||+.+... ++.. .+..++...|.+.|+|+.|+++|.+||+||+|+.
T Consensus 13 ~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~ 92 (942)
T KOG0973|consen 13 EKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRL 92 (942)
T ss_pred CeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECCCCCeEeeccCcce
Confidence 46799999999999999999 99999999976422 2222 3456677889999999999999999999999999
Q ss_pred EEEEEeeecccCCCccccc-ccc-----ccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCccccee
Q 000410 1211 IHMFSVDHISRGLGNVEKY-SGI-----SDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTL 1284 (1553)
Q Consensus 1211 I~vwdi~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l 1284 (1553)
|.||+.... +.+...+- .+. ........+|..-|..++|+|+ +.++++++.|++|.+||.++.+.+.++
T Consensus 93 v~iW~~~~~--~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~---~~~lvS~s~DnsViiwn~~tF~~~~vl 167 (942)
T KOG0973|consen 93 VMIWERAEI--GSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPD---DSLLVSVSLDNSVIIWNAKTFELLKVL 167 (942)
T ss_pred EEEeeeccc--CCcccccccccccccceeeEEEEEecCCCccceeccCCC---ccEEEEecccceEEEEccccceeeeee
Confidence 999998731 11111111 011 1122233457777888899998 679999999999999999999999999
Q ss_pred ccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccC-----CcceEEeecCCCCCccccCCCCEEE
Q 000410 1285 KAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVC-----PIEKMCLFVPPPNAAVSTTARPLIY 1359 (1553)
Q Consensus 1285 ~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~-----~I~~l~~~~p~~~~~~~s~~~~~l~ 1359 (1553)
.. |++.|-.+.|||-|++|++-+.|++|++|++......+++..+... ...++.| +|+|.+++
T Consensus 168 ~~--H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f~RlSW----------SPDG~~la 235 (942)
T KOG0973|consen 168 RG--HQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFFLRLSW----------SPDGHHLA 235 (942)
T ss_pred ec--ccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCcceeeeccc----------CCCcCeec
Confidence 87 9999999999999999999999999999997776666666554332 2344444 45667887
Q ss_pred EEEc----CCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCc
Q 000410 1360 VAAG----CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGI 1435 (1553)
Q Consensus 1360 s~s~----dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V 1435 (1553)
++.+ -..+.|.+-.+.++-.-|.+|.. ++
T Consensus 236 s~nA~n~~~~~~~IieR~tWk~~~~LvGH~~-----------------------------------------------p~ 268 (942)
T KOG0973|consen 236 SPNAVNGGKSTIAIIERGTWKVDKDLVGHSA-----------------------------------------------PV 268 (942)
T ss_pred chhhccCCcceeEEEecCCceeeeeeecCCC-----------------------------------------------ce
Confidence 7743 23466666655555555544333 34
Q ss_pred EEeccCC---------------C---CeEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEee
Q 000410 1436 RSLLPLP---------------G---GDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQER 1497 (1553)
Q Consensus 1436 ~sl~~sp---------------~---g~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 1497 (1553)
.+++|+| + ..+++||.|+.|-+|....++..+++...
T Consensus 269 evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~l------------------------- 323 (942)
T KOG0973|consen 269 EVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNL------------------------- 323 (942)
T ss_pred EEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhh-------------------------
Confidence 4444433 0 13558999999999998765444332210
Q ss_pred ecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000410 1498 KRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVW 1552 (1553)
Q Consensus 1498 ~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVW 1552 (1553)
-..+|.|+ .|+++|--|..||.||+|.+.
T Consensus 324 -------------------------f~~SI~Dm-sWspdG~~LfacS~DGtV~~i 352 (942)
T KOG0973|consen 324 -------------------------FNKSIVDM-SWSPDGFSLFACSLDGTVALI 352 (942)
T ss_pred -------------------------hcCceeee-eEcCCCCeEEEEecCCeEEEE
Confidence 23579999 899999999999999999875
No 469
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=99.88 E-value=1.7e-22 Score=229.72 Aligned_cols=256 Identities=16% Similarity=0.273 Sum_probs=197.8
Q ss_pred CCcc--cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCC-
Q 000410 1123 SGWR--PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS- 1199 (1553)
Q Consensus 1123 ~~W~--p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~- 1199 (1553)
..|+ ..|.|+.++.||..+|.+++|+++|..|.|||.|+++|+||+++|.. ...+.. +..++|+.|.|++
T Consensus 240 klW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~------~~~f~~-~~~~~cvkf~pd~~ 312 (503)
T KOG0282|consen 240 KLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDTETGQV------LSRFHL-DKVPTCVKFHPDNQ 312 (503)
T ss_pred EEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeeccccceE------EEEEec-CCCceeeecCCCCC
Confidence 3687 45899999999999999999999999999999999999999999873 223322 2358999999987
Q ss_pred cEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCc
Q 000410 1200 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1279 (1553)
Q Consensus 1200 ~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~ 1279 (1553)
+.|++|+.|+.|+.||+++ + .+......|-..+..+.|-++ +..+++++.|+++++|+.+.+-
T Consensus 313 n~fl~G~sd~ki~~wDiRs-----~---------kvvqeYd~hLg~i~~i~F~~~---g~rFissSDdks~riWe~~~~v 375 (503)
T KOG0282|consen 313 NIFLVGGSDKKIRQWDIRS-----G---------KVVQEYDRHLGAILDITFVDE---GRRFISSSDDKSVRIWENRIPV 375 (503)
T ss_pred cEEEEecCCCcEEEEeccc-----h---------HHHHHHHhhhhheeeeEEccC---CceEeeeccCccEEEEEcCCCc
Confidence 8899999999999999984 1 111122234456778889998 7899999999999999999887
Q ss_pred ccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCccc---ceeeccccCCcceEEeecCCCCCccccCCCC
Q 000410 1280 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPV---NSWQYSQVCPIEKMCLFVPPPNAAVSTTARP 1356 (1553)
Q Consensus 1280 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l---~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~ 1356 (1553)
.+.-.. ..+.....|+..+|++.|++.-+.|..+-++.+...-.. +.+. .|..+ .....+.|+++|.
T Consensus 376 ~ik~i~-~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~fe-Gh~va--------Gys~~v~fSpDG~ 445 (503)
T KOG0282|consen 376 PIKNIA-DPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFE-GHSVA--------GYSCQVDFSPDGR 445 (503)
T ss_pred cchhhc-chhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhc-ceecc--------CceeeEEEcCCCC
Confidence 665333 234556889999999999999999999999986533222 1111 12211 1222345677889
Q ss_pred EEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcE
Q 000410 1357 LIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIR 1436 (1553)
Q Consensus 1357 ~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~ 1436 (1553)
+|++|.++|.+.+||..+.+....+.. |...+.
T Consensus 446 ~l~SGdsdG~v~~wdwkt~kl~~~lka-----------------------------------------------h~~~ci 478 (503)
T KOG0282|consen 446 TLCSGDSDGKVNFWDWKTTKLVSKLKA-----------------------------------------------HDQPCI 478 (503)
T ss_pred eEEeecCCccEEEeechhhhhhhcccc-----------------------------------------------CCcceE
Confidence 999999999999999987665444432 233688
Q ss_pred EeccCCCC--eEEEccCCCeEEEEe
Q 000410 1437 SLLPLPGG--DLLTGGTDLKIRRWD 1459 (1553)
Q Consensus 1437 sl~~sp~g--~llTgg~Dg~IrlWD 1459 (1553)
.+.|+|.. .++|||.||.|++||
T Consensus 479 ~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 479 GVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred EEEecCCCcceeEecccCceeEecC
Confidence 89999976 899999999999997
No 470
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.88 E-value=5.6e-22 Score=208.54 Aligned_cols=243 Identities=15% Similarity=0.241 Sum_probs=192.0
Q ss_pred cccCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEec-CCcEEEEEeCCCcEEEEE
Q 000410 1138 HCSAVNEIAISHDHS-FFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLR-HSAQVVVGACDGIIHMFS 1215 (1553)
Q Consensus 1138 H~~~V~~l~~spd~~-~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~-~~~~las~s~DG~I~vwd 1215 (1553)
-.+++..++|++... .+++|+.||+++|||..... .+...++.|...|.++.|.+ .++.++++|.||+|++|+
T Consensus 59 ~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~~~s-----~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~ 133 (311)
T KOG0277|consen 59 TEDGLFDVAWSENHENQVIAASGDGSLRLFDLTMPS-----KPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWD 133 (311)
T ss_pred cccceeEeeecCCCcceEEEEecCceEEEeccCCCC-----cchhHHHhhhhheEEeccccccceeEEeeccCCceEeec
Confidence 457899999998764 89999999999999965443 36667889999999999998 567788999999999999
Q ss_pred eeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEE
Q 000410 1216 VDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSS 1295 (1553)
Q Consensus 1216 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Its 1295 (1553)
.+... .+. ...+|..+|....|+|.. ++++++++.||.+++||+|....-..++. |...|.|
T Consensus 134 ~~r~~-------------Sv~-Tf~gh~~~Iy~a~~sp~~--~nlfas~Sgd~~l~lwdvr~~gk~~~i~a--h~~Eil~ 195 (311)
T KOG0277|consen 134 PNRPN-------------SVQ-TFNGHNSCIYQAAFSPHI--PNLFASASGDGTLRLWDVRSPGKFMSIEA--HNSEILC 195 (311)
T ss_pred CCCCc-------------ceE-eecCCccEEEEEecCCCC--CCeEEEccCCceEEEEEecCCCceeEEEe--ccceeEe
Confidence 86311 112 244578899999999986 55999999999999999998654444554 7788999
Q ss_pred EEEcC-CCCEEEEEeCCCcEEEEeCCCC-cccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcC
Q 000410 1296 LVTGP-CGNWFVSGSSRGVLTLWDLRFL-VPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAE 1373 (1553)
Q Consensus 1296 l~~sp-~g~~LvsGs~dG~l~lWDlr~~-~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~ 1373 (1553)
+.|+. +.+.|++|+.|+.|++||+|.. .++..+ ..|.-.|.++.+ +|... ..+++++.|-+++|||.+
T Consensus 196 cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL-~gh~~AVRkvk~-Sph~~--------~lLaSasYDmT~riw~~~ 265 (311)
T KOG0277|consen 196 CDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFEL-NGHGLAVRKVKF-SPHHA--------SLLASASYDMTVRIWDPE 265 (311)
T ss_pred ecccccCCcEEEecCCCceEEEEehhhccccceee-cCCceEEEEEec-Ccchh--------hHhhhccccceEEecccc
Confidence 99997 5688999999999999999975 455555 457778999998 77653 478999999999999998
Q ss_pred CCc-EEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCC--CCeEEEcc
Q 000410 1374 NGS-CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP--GGDLLTGG 1450 (1553)
Q Consensus 1374 tg~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp--~g~llTgg 1450 (1553)
.++ +++++. -|...|..+.|++ .+.++++|
T Consensus 266 ~~ds~~e~~~-----------------------------------------------~HtEFv~g~Dws~~~~~~vAs~g 298 (311)
T KOG0277|consen 266 RQDSAIETVD-----------------------------------------------HHTEFVCGLDWSLFDPGQVASTG 298 (311)
T ss_pred cchhhhhhhh-----------------------------------------------ccceEEeccccccccCceeeecc
Confidence 553 222221 1223577777776 35899999
Q ss_pred CCCeEEEEeC
Q 000410 1451 TDLKIRRWDH 1460 (1553)
Q Consensus 1451 ~Dg~IrlWDl 1460 (1553)
+|..+.+|+-
T Consensus 299 WDe~l~Vw~p 308 (311)
T KOG0277|consen 299 WDELLYVWNP 308 (311)
T ss_pred cccceeeecc
Confidence 9999999983
No 471
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.88 E-value=9.1e-22 Score=211.22 Aligned_cols=307 Identities=15% Similarity=0.184 Sum_probs=227.5
Q ss_pred ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCC
Q 000410 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACD 1208 (1553)
Q Consensus 1129 G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~D 1208 (1553)
.+++..|.||++.|..++.......+.|+|.|.|.+||.++++. +..+|.+|.+.|+|++|++.+..+++++.|
T Consensus 138 ~~lvre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~------CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD 211 (481)
T KOG0300|consen 138 FRLVRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGA------CLATYTGHTGSVNSIKFHNSGLLLLTASGD 211 (481)
T ss_pred EeehhhhcccccceeeehhhcCCcceeecccccceeEEeecccc------ceeeecccccceeeEEeccccceEEEccCC
Confidence 45889999999999999998777799999999999999999886 788999999999999999999999999999
Q ss_pred CcEEEEEee------ecccCCCc-----c------ccc------cccccce---ecccCCCcEEEEEEecCCCCcceEEE
Q 000410 1209 GIIHMFSVD------HISRGLGN-----V------EKY------SGISDIK---KKDTKEGAIVTLVNYNTDNCASHMFM 1262 (1553)
Q Consensus 1209 G~I~vwdi~------~~~~~~~~-----~------~~~------~~~~~~~---~~~~~~~~~v~~~~~~~~~~s~~~l~ 1262 (1553)
++.+||... ......+. . .+. ..-..++ ....+|..+|.+..|-.. ++.++
T Consensus 212 ~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~g---g~Q~v 288 (481)
T KOG0300|consen 212 ETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAG---GQQMV 288 (481)
T ss_pred cchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcC---cceee
Confidence 999999832 10000000 0 000 0001122 122356777877788777 77999
Q ss_pred EEeCCceEEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEee
Q 000410 1263 YSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLF 1342 (1553)
Q Consensus 1263 ~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~ 1342 (1553)
++++|.+-.+||+.+++.+..+.+ |....+-++-+|..+.+++.+.|-+.++||+|....--..-.+|...|++..|
T Consensus 289 TaSWDRTAnlwDVEtge~v~~LtG--Hd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF- 365 (481)
T KOG0300|consen 289 TASWDRTANLWDVETGEVVNILTG--HDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVF- 365 (481)
T ss_pred eeeccccceeeeeccCceeccccC--cchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEE-
Confidence 999999999999999999999987 88889999999999999999999999999999654433333346667887777
Q ss_pred cCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCc-EEEEEecccCCCCCccCCCcccccCCCCCCCCCcccccccccccc
Q 000410 1343 VPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGS-CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYR 1421 (1553)
Q Consensus 1343 ~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~-~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 1421 (1553)
.- +..+++|+.|.+|+|||+++.. .+.+++..
T Consensus 366 ~~----------dd~vVSgSDDrTvKvWdLrNMRsplATIRtd------------------------------------- 398 (481)
T KOG0300|consen 366 NT----------DDRVVSGSDDRTVKVWDLRNMRSPLATIRTD------------------------------------- 398 (481)
T ss_pred ec----------CCceeecCCCceEEEeeeccccCcceeeecC-------------------------------------
Confidence 22 3358999999999999998653 22222211
Q ss_pred ccccCCCCCCccCcEEeccCCCC-eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecC
Q 000410 1422 VDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQ 1500 (1553)
Q Consensus 1422 ~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 1500 (1553)
..++-++.+.++ .|+.--+.+.||+||+......+.
T Consensus 399 -----------S~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRl-------------------------------- 435 (481)
T KOG0300|consen 399 -----------SPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARL-------------------------------- 435 (481)
T ss_pred -----------CccceeEeecCCceEEeccCCceEEEEecCCCccccC--------------------------------
Confidence 135556666666 444677789999999863322110
Q ss_pred CcchhhhHHHHHhhhhcCccCCCccceeEEeeeec--CCcEEEEEcCCceEEEcC
Q 000410 1501 PLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKL--NQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1501 ~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~--~~~~LvSas~DG~IkVWk 1553 (1553)
| ...-.||...|+|+| |.. +-.-|.||+-|..+.=|+
T Consensus 436 P---------------rtsRqgHrRMV~c~A-W~eehp~cnLftcGFDR~v~gW~ 474 (481)
T KOG0300|consen 436 P---------------RTSRQGHRRMVTCCA-WLEEHPACNLFTCGFDRMVAGWK 474 (481)
T ss_pred C---------------cccccccceeeeeee-ccccCcccccccccccceeeeeE
Confidence 0 001236999999995 543 356699999999998885
No 472
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.88 E-value=9.6e-23 Score=226.48 Aligned_cols=247 Identities=18% Similarity=0.186 Sum_probs=192.1
Q ss_pred ceEEEEEeeccCcEEEEEEEECC-------ceEEEEEEeccCCCcCHHHHHHHHHHHHHHHhcCCCCCeeEEEEEE-EeC
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE-------GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQ-ETD 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~fg~V~~a~~~~-------~~vavKv~~~~~~~~~~~~~~~~l~~e~~~l~~l~hpnIv~~~~~~-~~~ 97 (1553)
+++....+-+|.||.||+|.+.+ +.|.+|.++... .+-....+..|.-.+..+.|||++++.++. ++.
T Consensus 285 Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~A----S~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~ 360 (563)
T KOG1024|consen 285 RVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHA----SQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDY 360 (563)
T ss_pred heechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcc----cHHHHHHHHHHHHHHhcCcCCCccceeEEEeecc
Confidence 45666678899999999996643 346677664331 122334556666678888999999998876 445
Q ss_pred CEEEEEecccc-CCHHHHhc-----CC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeec
Q 000410 98 KAAYLLRQYFF-NSLRDRLS-----TP---PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDF 168 (1553)
Q Consensus 98 ~~~~lV~E~~~-gsL~d~l~-----~~---~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DF 168 (1553)
...+++..+.. |+|..++. +. ..++..+...++.|++.|++|||++||+|.||...|.+|++.-+|||+|=
T Consensus 361 ~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDs 440 (563)
T KOG1024|consen 361 ATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDS 440 (563)
T ss_pred CcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccc
Confidence 56788889998 89999986 21 23788899999999999999999999999999999999999999999999
Q ss_pred CccccccCCCCCCCCcceeeecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHc-CCCCCCchH--
Q 000410 169 ASFKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFL-EVPFFELSH-- 245 (1553)
Q Consensus 169 G~a~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLlt-g~~pf~~~~-- 245 (1553)
.+++.. -|.++...-+...+...||+||-+. ...|+.++|+||||+++|||+| |+.||..-+
T Consensus 441 aLSRDL-----FP~DYhcLGDnEnRPvkWMslEal~----------n~~yssasDvWsfGVllWELmtlg~~PyaeIDPf 505 (563)
T KOG1024|consen 441 ALSRDL-----FPGDYHCLGDNENRPVKWMSLEALQ----------NSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPF 505 (563)
T ss_pred hhcccc-----CcccccccCCCCCCcccccCHHHHh----------hhhhcchhhhHHHHHHHHHHHhcCCCCccccCHH
Confidence 998866 3445555545556677899999664 5578999999999999999998 588885443
Q ss_pred -HHHHHhcCCCCCCCCCCCCCHHHHHHHHHhcccCcCCCCCHHHHHHhh
Q 000410 246 -LLAYRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 246 -~~~~~~~~~~~~~~~~~~~~~~l~~LI~~mL~~dP~~Rpsa~elL~~~ 293 (1553)
+..|.+..++.. .+...++++..++.-||..+|++||+.+|+..-+
T Consensus 506 Em~~ylkdGyRla--QP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cL 552 (563)
T KOG1024|consen 506 EMEHYLKDGYRLA--QPFNCPDELFTVMACCWALLPEERPSFSQLVICL 552 (563)
T ss_pred HHHHHHhccceec--CCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHH
Confidence 344555555433 2334557899999999999999999999998754
No 473
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.88 E-value=5.2e-22 Score=230.16 Aligned_cols=244 Identities=15% Similarity=0.283 Sum_probs=200.4
Q ss_pred eeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEE
Q 000410 1182 TYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMF 1261 (1553)
Q Consensus 1182 ~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l 1261 (1553)
++..++.+|.|+.|+|..-.++++-.+|.|+||+.++.. .++.... ...+|....|-+. .+.+
T Consensus 8 k~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqt-------------mVksfeV-~~~PvRa~kfiaR---knWi 70 (794)
T KOG0276|consen 8 KFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQT-------------MVKSFEV-SEVPVRAAKFIAR---KNWI 70 (794)
T ss_pred HhhccCCceeeeecCCCCceEEEeeecCeeEEEecccce-------------eeeeeee-cccchhhheeeec---cceE
Confidence 344578899999999999999999999999999998511 1111111 2335555667666 6699
Q ss_pred EEEeCCceEEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-cccceeeccccCCcceEE
Q 000410 1262 MYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL-VPVNSWQYSQVCPIEKMC 1340 (1553)
Q Consensus 1262 ~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~-~~l~s~~~~~~~~I~~l~ 1340 (1553)
++|+.|..|++|+..|++.+.+++. |.+.|+|++++|...+++++|.|-+|++||.... .+..+++. |..-|.+++
T Consensus 71 v~GsDD~~IrVfnynt~ekV~~FeA--H~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeG-H~HyVMqv~ 147 (794)
T KOG0276|consen 71 VTGSDDMQIRVFNYNTGEKVKTFEA--HSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEG-HEHYVMQVA 147 (794)
T ss_pred EEecCCceEEEEecccceeeEEeec--cccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcC-cceEEEEEE
Confidence 9999999999999999999999987 9999999999999999999999999999998754 34445543 566788888
Q ss_pred eecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccc
Q 000410 1341 LFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKY 1420 (1553)
Q Consensus 1341 ~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 1420 (1553)
+ .|.. .+.+++++-|++|+||.+....|-.++.
T Consensus 148 f-nPkD--------~ntFaS~sLDrTVKVWslgs~~~nfTl~-------------------------------------- 180 (794)
T KOG0276|consen 148 F-NPKD--------PNTFASASLDRTVKVWSLGSPHPNFTLE-------------------------------------- 180 (794)
T ss_pred e-cCCC--------ccceeeeeccccEEEEEcCCCCCceeee--------------------------------------
Confidence 8 6643 3579999999999999998877766665
Q ss_pred cccccCCCCCCccCcEEeccCCCC---eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEee
Q 000410 1421 RVDELNEPPPRLLGIRSLLPLPGG---DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQER 1497 (1553)
Q Consensus 1421 ~~~~l~~~~~~~~~V~sl~~sp~g---~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~ 1497 (1553)
+|..+|+|+.+-+.| .|+||++|..|++||.++..+..++.
T Consensus 181 ---------gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLe--------------------------- 224 (794)
T KOG0276|consen 181 ---------GHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLE--------------------------- 224 (794)
T ss_pred ---------ccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhh---------------------------
Confidence 344489999998887 89999999999999998776655443
Q ss_pred ecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEcC
Q 000410 1498 KRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1498 ~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVWk 1553 (1553)
||..-|+.+ +|+|.-++++|||.||+||||.
T Consensus 225 ------------------------GHt~Nvs~v-~fhp~lpiiisgsEDGTvriWh 255 (794)
T KOG0276|consen 225 ------------------------GHTNNVSFV-FFHPELPIIISGSEDGTVRIWN 255 (794)
T ss_pred ------------------------cccccceEE-EecCCCcEEEEecCCccEEEec
Confidence 488999999 8999999999999999999994
No 474
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.88 E-value=3.9e-21 Score=215.31 Aligned_cols=284 Identities=17% Similarity=0.202 Sum_probs=228.2
Q ss_pred cCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeec
Q 000410 1140 SAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHI 1219 (1553)
Q Consensus 1140 ~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~ 1219 (1553)
..|+++...|...++.||+.|.++-++|..+.. ...++.+|...|+++.|+++...+++++.|..|+||.+...
T Consensus 220 pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q------~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~ 293 (506)
T KOG0289|consen 220 PGITALDIIPSSSKILTGGEDKTAVLFDKPSNQ------ILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLS 293 (506)
T ss_pred CCeeEEeecCCCCcceecCCCCceEEEecchhh------hhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccc
Confidence 468888888887899999999999999988654 56689999999999999999999999999999999998631
Q ss_pred ccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEEEc
Q 000410 1220 SRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTG 1299 (1553)
Q Consensus 1220 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~s 1299 (1553)
+ .......|..+|..+..+|. |.+|+++++||+..+.|++++.+..........-.++|.+|+
T Consensus 294 s--------------~~~~~~~h~~~V~~ls~h~t---geYllsAs~d~~w~Fsd~~~g~~lt~vs~~~s~v~~ts~~fH 356 (506)
T KOG0289|consen 294 S--------------EPTSSRPHEEPVTGLSLHPT---GEYLLSASNDGTWAFSDISSGSQLTVVSDETSDVEYTSAAFH 356 (506)
T ss_pred c--------------CccccccccccceeeeeccC---CcEEEEecCCceEEEEEccCCcEEEEEeeccccceeEEeeEc
Confidence 1 11223356788899999998 789999999999999999999987665542233459999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEE
Q 000410 1300 PCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQ 1379 (1553)
Q Consensus 1300 p~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~ 1379 (1553)
|||..|.+|+.||.|++||+..+..+..+.. |.++|..+.| +.+|.|+++++.|++|++||+++.+..+
T Consensus 357 pDgLifgtgt~d~~vkiwdlks~~~~a~Fpg-ht~~vk~i~F----------sENGY~Lat~add~~V~lwDLRKl~n~k 425 (506)
T KOG0289|consen 357 PDGLIFGTGTPDGVVKIWDLKSQTNVAKFPG-HTGPVKAISF----------SENGYWLATAADDGSVKLWDLRKLKNFK 425 (506)
T ss_pred CCceEEeccCCCceEEEEEcCCccccccCCC-CCCceeEEEe----------ccCceEEEEEecCCeEEEEEehhhcccc
Confidence 9999999999999999999999998888776 7889998887 4568999999999999999999877555
Q ss_pred EEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccCCCeEEEE
Q 000410 1380 VLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRW 1458 (1553)
Q Consensus 1380 ~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlW 1458 (1553)
++..... .+|.++.|.+.| +|+.+|.|=+|+++
T Consensus 426 t~~l~~~----------------------------------------------~~v~s~~fD~SGt~L~~~g~~l~Vy~~ 459 (506)
T KOG0289|consen 426 TIQLDEK----------------------------------------------KEVNSLSFDQSGTYLGIAGSDLQVYIC 459 (506)
T ss_pred eeecccc----------------------------------------------ccceeEEEcCCCCeEEeecceeEEEEE
Confidence 5442111 158899999988 56688999888888
Q ss_pred eCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeeecCCc
Q 000410 1459 DHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQR 1538 (1553)
Q Consensus 1459 Dl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~ 1538 (1553)
+-.+.+-..+.. ..-|.+..+.+ .|....+
T Consensus 460 ~k~~k~W~~~~~-------------------------------------------------~~~~sg~st~v-~Fg~~aq 489 (506)
T KOG0289|consen 460 KKKTKSWTEIKE-------------------------------------------------LADHSGLSTGV-RFGEHAQ 489 (506)
T ss_pred ecccccceeeeh-------------------------------------------------hhhccccccee-eecccce
Confidence 754332221111 11166677777 7888899
Q ss_pred EEEEEcCCceEEEcC
Q 000410 1539 LLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1539 ~LvSas~DG~IkVWk 1553 (1553)
+++++|.|...+|+.
T Consensus 490 ~l~s~smd~~l~~~a 504 (506)
T KOG0289|consen 490 YLASTSMDAILRLYA 504 (506)
T ss_pred EEeeccchhheEEee
Confidence 999999999998863
No 475
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.88 E-value=3.5e-21 Score=219.71 Aligned_cols=275 Identities=19% Similarity=0.310 Sum_probs=208.0
Q ss_pred cCeeEEEEcCCCC--EEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEee
Q 000410 1140 SAVNEIAISHDHS--FFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVD 1217 (1553)
Q Consensus 1140 ~~V~~l~~spd~~--~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~ 1217 (1553)
++|++++|+|.+. +.+|+| -.|.|++..+.. ...++..-...+.+++|..+|..+++|...|.|+|||+.
T Consensus 27 ~~vssl~fsp~~P~d~aVt~S--~rvqly~~~~~~------~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k 98 (487)
T KOG0310|consen 27 NSVSSLCFSPKHPYDFAVTSS--VRVQLYSSVTRS------VRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMK 98 (487)
T ss_pred CcceeEecCCCCCCceEEecc--cEEEEEecchhh------hhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccc
Confidence 6899999999664 555555 479999987654 222222333459999999999999999999999999964
Q ss_pred ecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEE
Q 000410 1218 HISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLV 1297 (1553)
Q Consensus 1218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~ 1297 (1553)
+ ..+......|..++....|+|.+ +.++++|+.|+.++.||+.+......+. +|.+.|.|.+
T Consensus 99 ~--------------r~iLR~~~ah~apv~~~~f~~~d--~t~l~s~sDd~v~k~~d~s~a~v~~~l~--~htDYVR~g~ 160 (487)
T KOG0310|consen 99 S--------------RVILRQLYAHQAPVHVTKFSPQD--NTMLVSGSDDKVVKYWDLSTAYVQAELS--GHTDYVRCGD 160 (487)
T ss_pred c--------------HHHHHHHhhccCceeEEEecccC--CeEEEecCCCceEEEEEcCCcEEEEEec--CCcceeEeec
Confidence 2 12333445688899999999985 6699999999999999999988644554 4999999999
Q ss_pred EcCC-CCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCc
Q 000410 1298 TGPC-GNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGS 1376 (1553)
Q Consensus 1298 ~sp~-g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~ 1376 (1553)
|+|- +..+++|+.||.|++||+|... -......|..||..+++ -|.+. .+++++ .+.|+|||+-+|.
T Consensus 161 ~~~~~~hivvtGsYDg~vrl~DtR~~~-~~v~elnhg~pVe~vl~-lpsgs---------~iasAg-Gn~vkVWDl~~G~ 228 (487)
T KOG0310|consen 161 ISPANDHIVVTGSYDGKVRLWDTRSLT-SRVVELNHGCPVESVLA-LPSGS---------LIASAG-GNSVKVWDLTTGG 228 (487)
T ss_pred cccCCCeEEEecCCCceEEEEEeccCC-ceeEEecCCCceeeEEE-cCCCC---------EEEEcC-CCeEEEEEecCCc
Confidence 9995 4689999999999999999885 34444556789999988 66543 555554 5579999998664
Q ss_pred EEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccCCCeE
Q 000410 1377 CHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKI 1455 (1553)
Q Consensus 1377 ~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~I 1455 (1553)
..-+. ...|.-.|+|+++..++ +|+|||-||.+
T Consensus 229 qll~~----------------------------------------------~~~H~KtVTcL~l~s~~~rLlS~sLD~~V 262 (487)
T KOG0310|consen 229 QLLTS----------------------------------------------MFNHNKTVTCLRLASDSTRLLSGSLDRHV 262 (487)
T ss_pred eehhh----------------------------------------------hhcccceEEEEEeecCCceEeecccccce
Confidence 21111 01244579999998877 89999999999
Q ss_pred EEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeeec
Q 000410 1456 RRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKL 1535 (1553)
Q Consensus 1456 rlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~ 1535 (1553)
++||+.+-+ ++.+-. -.++|.++ .+++
T Consensus 263 KVfd~t~~K---vv~s~~-------------------------------------------------~~~pvLsi-avs~ 289 (487)
T KOG0310|consen 263 KVFDTTNYK---VVHSWK-------------------------------------------------YPGPVLSI-AVSP 289 (487)
T ss_pred EEEEccceE---EEEeee-------------------------------------------------cccceeeE-EecC
Confidence 999976432 222110 34689999 5788
Q ss_pred CCcEEEEEcCCceEEE
Q 000410 1536 NQRLLISSSRDGAIKV 1551 (1553)
Q Consensus 1536 ~~~~LvSas~DG~IkV 1551 (1553)
+++.++.|..||.+-+
T Consensus 290 dd~t~viGmsnGlv~~ 305 (487)
T KOG0310|consen 290 DDQTVVIGMSNGLVSI 305 (487)
T ss_pred CCceEEEecccceeee
Confidence 8888999999998754
No 476
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.88 E-value=6.5e-21 Score=226.82 Aligned_cols=272 Identities=17% Similarity=0.269 Sum_probs=215.5
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCC
Q 000410 1144 EIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGL 1223 (1553)
Q Consensus 1144 ~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~ 1223 (1553)
=+.|+. ...+|.|. ...|.+|+..++. .......+...|+++.|+++|..|++|..+|.|.|||+...
T Consensus 182 lldWss-~n~laVal-g~~vylW~~~s~~------v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~---- 249 (484)
T KOG0305|consen 182 LLDWSS-ANVLAVAL-GQSVYLWSASSGS------VTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQ---- 249 (484)
T ss_pred Hhhccc-CCeEEEEe-cceEEEEecCCCc------eEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhc----
Confidence 355663 33455554 3579999988765 12222333677999999999999999999999999999731
Q ss_pred CccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccce-eccCCCCcceEEEEEcCCC
Q 000410 1224 GNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWT-LKAIPEEGYVSSLVTGPCG 1302 (1553)
Q Consensus 1224 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~-l~~~~h~g~Itsl~~sp~g 1302 (1553)
..++.....|...|.+++|+.. .+.+|+.++.|..+|+|..+.... +. +|...|..+.|++|+
T Consensus 250 ---------k~~~~~~~~h~~rvg~laW~~~-----~lssGsr~~~I~~~dvR~~~~~~~~~~--~H~qeVCgLkws~d~ 313 (484)
T KOG0305|consen 250 ---------KKTRTLRGSHASRVGSLAWNSS-----VLSSGSRDGKILNHDVRISQHVVSTLQ--GHRQEVCGLKWSPDG 313 (484)
T ss_pred ---------cccccccCCcCceeEEEeccCc-----eEEEecCCCcEEEEEEecchhhhhhhh--cccceeeeeEECCCC
Confidence 1233344447889999999965 999999999999999999877655 44 488899999999999
Q ss_pred CEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEc--CCeEEEEEcCCCcEEEE
Q 000410 1303 NWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG--CNEVSLWNAENGSCHQV 1380 (1553)
Q Consensus 1303 ~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~--dg~V~vWDl~tg~~~~~ 1380 (1553)
++|++|+.|+.+.|||.+...+...+.. |.+.|..+.| +|... ..||+|+| |+.|++||..+|.+...
T Consensus 314 ~~lASGgnDN~~~Iwd~~~~~p~~~~~~-H~aAVKA~aw-cP~q~--------~lLAsGGGs~D~~i~fwn~~~g~~i~~ 383 (484)
T KOG0305|consen 314 NQLASGGNDNVVFIWDGLSPEPKFTFTE-HTAAVKALAW-CPWQS--------GLLATGGGSADRCIKFWNTNTGARIDS 383 (484)
T ss_pred CeeccCCCccceEeccCCCccccEEEec-cceeeeEeee-CCCcc--------CceEEcCCCcccEEEEEEcCCCcEecc
Confidence 9999999999999999987777777665 7788999999 78764 57888876 88999999999987655
Q ss_pred EecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEE--EccCCCeEEE
Q 000410 1381 LRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLL--TGGTDLKIRR 1457 (1553)
Q Consensus 1381 l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~ll--Tgg~Dg~Irl 1457 (1553)
+... ..|.++.|++.. .|+ -|-.+..|++
T Consensus 384 vdtg------------------------------------------------sQVcsL~Wsk~~kEi~sthG~s~n~i~l 415 (484)
T KOG0305|consen 384 VDTG------------------------------------------------SQVCSLIWSKKYKELLSTHGYSENQITL 415 (484)
T ss_pred cccC------------------------------------------------CceeeEEEcCCCCEEEEecCCCCCcEEE
Confidence 4311 158999999977 455 3555889999
Q ss_pred EeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeeecCC
Q 000410 1458 WDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVKLNQ 1537 (1553)
Q Consensus 1458 WDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~ 1537 (1553)
|+..+.+....+. +|...|..+ +++|+|
T Consensus 416 w~~ps~~~~~~l~---------------------------------------------------gH~~RVl~l-a~SPdg 443 (484)
T KOG0305|consen 416 WKYPSMKLVAELL---------------------------------------------------GHTSRVLYL-ALSPDG 443 (484)
T ss_pred Eeccccceeeeec---------------------------------------------------CCcceeEEE-EECCCC
Confidence 9987654433332 499999999 799999
Q ss_pred cEEEEEcCCceEEEcC
Q 000410 1538 RLLISSSRDGAIKVWK 1553 (1553)
Q Consensus 1538 ~~LvSas~DG~IkVWk 1553 (1553)
..|+||+.|.++++|+
T Consensus 444 ~~i~t~a~DETlrfw~ 459 (484)
T KOG0305|consen 444 ETIVTGAADETLRFWN 459 (484)
T ss_pred CEEEEecccCcEEecc
Confidence 9999999999999996
No 477
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.88 E-value=1.2e-21 Score=210.40 Aligned_cols=260 Identities=18% Similarity=0.309 Sum_probs=201.1
Q ss_pred cEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCC
Q 000410 1130 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDG 1209 (1553)
Q Consensus 1130 ~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG 1209 (1553)
.++.+|-.|.+.|+++.|+|....|+|||.|+|||++|..+......++ .+ .....|.++.|+|.|..+++|++..
T Consensus 163 PvIRTlYDH~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K---~~-qd~~~vrsiSfHPsGefllvgTdHp 238 (430)
T KOG0640|consen 163 PVIRTLYDHVDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFK---VF-QDTEPVRSISFHPSGEFLLVGTDHP 238 (430)
T ss_pred ceEeehhhccCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHH---Hh-hccceeeeEeecCCCceEEEecCCC
Confidence 3789999999999999999999999999999999999998643211111 22 2344699999999999999999999
Q ss_pred cEEEEEeeecccCCCcccccccccccee--cccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccC
Q 000410 1210 IIHMFSVDHISRGLGNVEKYSGISDIKK--KDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1287 (1553)
Q Consensus 1210 ~I~vwdi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~ 1287 (1553)
++++||+++.+ ++.. -+.+|...|+++.|++. +++.++|+.||.|++||=-+++|+.++...
T Consensus 239 ~~rlYdv~T~Q-------------cfvsanPd~qht~ai~~V~Ys~t---~~lYvTaSkDG~IklwDGVS~rCv~t~~~A 302 (430)
T KOG0640|consen 239 TLRLYDVNTYQ-------------CFVSANPDDQHTGAITQVRYSST---GSLYVTASKDGAIKLWDGVSNRCVRTIGNA 302 (430)
T ss_pred ceeEEecccee-------------EeeecCcccccccceeEEEecCC---ccEEEEeccCCcEEeeccccHHHHHHHHhh
Confidence 99999998522 1111 23357788999999998 789999999999999999999999999874
Q ss_pred CCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEc-CCe
Q 000410 1288 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG-CNE 1366 (1553)
Q Consensus 1288 ~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~-dg~ 1366 (1553)
.....|.|..|..+|+++++.+.|.++++|.+.++.++..+.......-.. + ...+.|.....+++.-.. .++
T Consensus 303 H~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~--~----rtqAvFNhtEdyVl~pDEas~s 376 (430)
T KOG0640|consen 303 HGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQK--H----RTQAVFNHTEDYVLFPDEASNS 376 (430)
T ss_pred cCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecCCcccchh--h----hhhhhhcCccceEEccccccCc
Confidence 445569999999999999999999999999999999999887643221100 0 011223333345544433 567
Q ss_pred EEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-e
Q 000410 1367 VSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-D 1445 (1553)
Q Consensus 1367 V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~ 1445 (1553)
+--||.+++..+..+. .+|++.++++..+|.+ .
T Consensus 377 lcsWdaRtadr~~l~s----------------------------------------------lgHn~a~R~i~HSP~~p~ 410 (430)
T KOG0640|consen 377 LCSWDARTADRVALLS----------------------------------------------LGHNGAVRWIVHSPVEPA 410 (430)
T ss_pred eeeccccchhhhhhcc----------------------------------------------cCCCCCceEEEeCCCCCc
Confidence 8889988775433322 3566689999999987 7
Q ss_pred EEEccCCCeEEEEeCC
Q 000410 1446 LLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1446 llTgg~Dg~IrlWDl~ 1461 (1553)
++|||.|.++|||--+
T Consensus 411 FmTcsdD~raRFWyrr 426 (430)
T KOG0640|consen 411 FMTCSDDFRARFWYRR 426 (430)
T ss_pred eeeecccceeeeeeec
Confidence 8899999999999743
No 478
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.87 E-value=1.4e-20 Score=203.18 Aligned_cols=307 Identities=15% Similarity=0.231 Sum_probs=203.3
Q ss_pred EeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEE-EeCCC
Q 000410 1131 LVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVV-GACDG 1209 (1553)
Q Consensus 1131 lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las-~s~DG 1209 (1553)
.++.|++|++.|++++|+.||++|||++.|++|+|||+++.+...-..-+..... +..+.+.|.|+...+++ +....
T Consensus 78 ~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~--dhpT~V~FapDc~s~vv~~~~g~ 155 (420)
T KOG2096|consen 78 NVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEY--DHPTRVVFAPDCKSVVVSVKRGN 155 (420)
T ss_pred hhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccC--CCceEEEECCCcceEEEEEccCC
Confidence 4788999999999999999999999999999999999997652211111222222 23678999999877665 44556
Q ss_pred cEEEEEeeecccCCCccccccccccceecc---cCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceecc
Q 000410 1210 IIHMFSVDHISRGLGNVEKYSGISDIKKKD---TKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKA 1286 (1553)
Q Consensus 1210 ~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~ 1286 (1553)
++++|....... |. ++ .....++ ......+..+.+...+ .+.+|++++.|..|.+||++ |+.+.++..
T Consensus 156 ~l~vyk~~K~~d--G~---~~--~~~v~~D~~~f~~kh~v~~i~iGiA~-~~k~imsas~dt~i~lw~lk-Gq~L~~idt 226 (420)
T KOG2096|consen 156 KLCVYKLVKKTD--GS---GS--HHFVHIDNLEFERKHQVDIINIGIAG-NAKYIMSASLDTKICLWDLK-GQLLQSIDT 226 (420)
T ss_pred EEEEEEeeeccc--CC---CC--cccccccccccchhcccceEEEeecC-CceEEEEecCCCcEEEEecC-Cceeeeecc
Confidence 799999874222 11 11 1111111 1122222222232221 16799999999999999999 888777754
Q ss_pred CCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc------ccceeec-cccCCcceEEeecCCCCCccccCCCCEEE
Q 000410 1287 IPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLV------PVNSWQY-SQVCPIEKMCLFVPPPNAAVSTTARPLIY 1359 (1553)
Q Consensus 1287 ~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~------~l~s~~~-~~~~~I~~l~~~~p~~~~~~~s~~~~~l~ 1359 (1553)
.+..-+..+++|+|+++++++-.--|++|..-|++ ..+.++. +|.+.|+.++| ++ +...++
T Consensus 227 --nq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aF-sn---------~S~r~v 294 (420)
T KOG2096|consen 227 --NQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAF-SN---------SSTRAV 294 (420)
T ss_pred --ccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeee-CC---------CcceeE
Confidence 34456678899999999999998899999875432 2233322 35667777777 44 345799
Q ss_pred EEEcCCeEEEEEcCC----CcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCc
Q 000410 1360 VAAGCNEVSLWNAEN----GSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGI 1435 (1553)
Q Consensus 1360 s~s~dg~V~vWDl~t----g~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V 1435 (1553)
++|.||..+|||+.- ++-.++++... .|+.... + ..+
T Consensus 295 tvSkDG~wriwdtdVrY~~~qDpk~Lk~g~---------------~pl~aag----------------------~--~p~ 335 (420)
T KOG2096|consen 295 TVSKDGKWRIWDTDVRYEAGQDPKILKEGS---------------APLHAAG----------------------S--EPV 335 (420)
T ss_pred EEecCCcEEEeeccceEecCCCchHhhcCC---------------cchhhcC----------------------C--Cce
Confidence 999999999999752 11111111100 0111100 0 023
Q ss_pred EEeccCCCCeEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhh
Q 000410 1436 RSLLPLPGGDLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAA 1515 (1553)
Q Consensus 1436 ~sl~~sp~g~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~ 1515 (1553)
-+..+|+|.+++.+....+.++..++++.--.
T Consensus 336 -RL~lsP~g~~lA~s~gs~l~~~~se~g~~~~~----------------------------------------------- 367 (420)
T KOG2096|consen 336 -RLELSPSGDSLAVSFGSDLKVFASEDGKDYPE----------------------------------------------- 367 (420)
T ss_pred -EEEeCCCCcEEEeecCCceEEEEcccCccchh-----------------------------------------------
Confidence 56778999888888888899998776433110
Q ss_pred hcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000410 1516 ATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVW 1552 (1553)
Q Consensus 1516 ~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVW 1552 (1553)
.-+-|...|+++ .|+++|++++||+ |..++|+
T Consensus 368 ---~e~~h~~~Is~i-s~~~~g~~~atcG-dr~vrv~ 399 (420)
T KOG2096|consen 368 ---LEDIHSTTISSI-SYSSDGKYIATCG-DRYVRVI 399 (420)
T ss_pred ---HHHhhcCceeeE-EecCCCcEEeeec-ceeeeee
Confidence 001299999999 7999999999998 5566654
No 479
>PTZ00421 coronin; Provisional
Probab=99.87 E-value=1.7e-20 Score=232.07 Aligned_cols=266 Identities=13% Similarity=0.123 Sum_probs=188.4
Q ss_pred cccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccc-------cccceeeecCCCceEEEEEec-CCcEEEEEeCCC
Q 000410 1138 HCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDIS-------FRSRLTYHLEGSRALCTMMLR-HSAQVVVGACDG 1209 (1553)
Q Consensus 1138 H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~-------~~~~~~~~~h~~~I~~l~f~~-~~~~las~s~DG 1209 (1553)
|-..|+....++|+..+++|+.+..+..|+...+..... ......+.+|.+.|++++|+| +++.|++|+.||
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~Dg 98 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDG 98 (493)
T ss_pred ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCC
Confidence 344566666777877788888888888888654321100 011224678999999999999 789999999999
Q ss_pred cEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCC
Q 000410 1210 IIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPE 1289 (1553)
Q Consensus 1210 ~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h 1289 (1553)
+|++||+..... . ............|...|.+++|+|++ +++|++++.|+.|++||+++++....+.. |
T Consensus 99 tIkIWdi~~~~~-----~--~~~~~~l~~L~gH~~~V~~l~f~P~~--~~iLaSgs~DgtVrIWDl~tg~~~~~l~~--h 167 (493)
T PTZ00421 99 TIMGWGIPEEGL-----T--QNISDPIVHLQGHTKKVGIVSFHPSA--MNVLASAGADMVVNVWDVERGKAVEVIKC--H 167 (493)
T ss_pred EEEEEecCCCcc-----c--cccCcceEEecCCCCcEEEEEeCcCC--CCEEEEEeCCCEEEEEECCCCeEEEEEcC--C
Confidence 999999963110 0 00001112233567789999999974 35999999999999999999988877765 8
Q ss_pred CcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEE----cCC
Q 000410 1290 EGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA----GCN 1365 (1553)
Q Consensus 1290 ~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s----~dg 1365 (1553)
.+.|++++|+|+|..|++|+.||.|++||+|.+..+..+..+....+.++.| .+. +..+++++ .|+
T Consensus 168 ~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w-~~~---------~~~ivt~G~s~s~Dr 237 (493)
T PTZ00421 168 SDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLW-AKR---------KDLIITLGCSKSQQR 237 (493)
T ss_pred CCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEE-cCC---------CCeEEEEecCCCCCC
Confidence 8899999999999999999999999999999998887776533333344555 443 23455543 378
Q ss_pred eEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-
Q 000410 1366 EVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG- 1444 (1553)
Q Consensus 1366 ~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g- 1444 (1553)
.|++||+++......... . .....+....|++++
T Consensus 238 ~VklWDlr~~~~p~~~~~--~-------------------------------------------d~~~~~~~~~~d~d~~ 272 (493)
T PTZ00421 238 QIMLWDTRKMASPYSTVD--L-------------------------------------------DQSSALFIPFFDEDTN 272 (493)
T ss_pred eEEEEeCCCCCCceeEec--c-------------------------------------------CCCCceEEEEEcCCCC
Confidence 999999986542111110 0 001135556778887
Q ss_pred eEEEcc-CCCeEEEEeCCCCCCceEE
Q 000410 1445 DLLTGG-TDLKIRRWDHCSPGRSYCI 1469 (1553)
Q Consensus 1445 ~llTgg-~Dg~IrlWDl~~~~~s~~~ 1469 (1553)
.+++|| .|+.||+||+.+++..+..
T Consensus 273 ~L~lggkgDg~Iriwdl~~~~~~~~~ 298 (493)
T PTZ00421 273 LLYIGSKGEGNIRCFELMNERLTFCS 298 (493)
T ss_pred EEEEEEeCCCeEEEEEeeCCceEEEe
Confidence 455666 6999999999987655443
No 480
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.87 E-value=1.8e-21 Score=227.44 Aligned_cols=264 Identities=15% Similarity=0.270 Sum_probs=208.4
Q ss_pred ccccCee---EEEEc-CCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEE
Q 000410 1137 EHCSAVN---EIAIS-HDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIH 1212 (1553)
Q Consensus 1137 ~H~~~V~---~l~~s-pd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~ 1212 (1553)
.|...|+ .+..+ |.+++|.|||.||++++|+.........-......+.|...|.++..+.+++.|++||.|-+|+
T Consensus 19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK 98 (735)
T KOG0308|consen 19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVK 98 (735)
T ss_pred hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEE
Confidence 4666677 55555 4667899999999999999875432111223456778999999999999999999999999999
Q ss_pred EEEeeecccCCCccccccccccceecccCCCcEEEEEEe-cCCCCcceEEEEEeCCceEEEEeCCCCc--ccceecc---
Q 000410 1213 MFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNY-NTDNCASHMFMYSTQNCGIHLWDTRSNS--NTWTLKA--- 1286 (1553)
Q Consensus 1213 vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~s~~~l~~~s~dg~I~iwDlrt~~--~~~~l~~--- 1286 (1553)
+|+..... .-+......|...|.|+++ -.+ ...+++|+-|+.|.+||+.++. .+.++.+
T Consensus 99 ~W~~~~~~------------~~c~stir~H~DYVkcla~~ak~---~~lvaSgGLD~~IflWDin~~~~~l~~s~n~~t~ 163 (735)
T KOG0308|consen 99 VWNAHKDN------------TFCMSTIRTHKDYVKCLAYIAKN---NELVASGGLDRKIFLWDINTGTATLVASFNNVTV 163 (735)
T ss_pred EeecccCc------------chhHhhhhcccchheeeeecccC---ceeEEecCCCccEEEEEccCcchhhhhhcccccc
Confidence 99987311 0111222357788899988 444 6699999999999999999883 3332221
Q ss_pred ---C-CCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEE
Q 000410 1287 ---I-PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA 1362 (1553)
Q Consensus 1287 ---~-~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s 1362 (1553)
. ++...|.|++.++.|..+++|+..+.|++||-|+...+..++ +|..-|..+.. +.+|..++++|
T Consensus 164 ~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLr-GHTdNVr~ll~----------~dDGt~~ls~s 232 (735)
T KOG0308|consen 164 NSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLR-GHTDNVRVLLV----------NDDGTRLLSAS 232 (735)
T ss_pred ccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeee-ccccceEEEEE----------cCCCCeEeecC
Confidence 1 467789999999999999999999999999999999998888 46667777766 34567899999
Q ss_pred cCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCC
Q 000410 1363 GCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLP 1442 (1553)
Q Consensus 1363 ~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp 1442 (1553)
.||+|++||+...+|+.++..+.. +|+++..+|
T Consensus 233 SDgtIrlWdLgqQrCl~T~~vH~e-----------------------------------------------~VWaL~~~~ 265 (735)
T KOG0308|consen 233 SDGTIRLWDLGQQRCLATYIVHKE-----------------------------------------------GVWALQSSP 265 (735)
T ss_pred CCceEEeeeccccceeeeEEeccC-----------------------------------------------ceEEEeeCC
Confidence 999999999999999999875543 688888887
Q ss_pred CC-eEEEccCCCeEEEEeCCCCCCceEEeCCC
Q 000410 1443 GG-DLLTGGTDLKIRRWDHCSPGRSYCICGPN 1473 (1553)
Q Consensus 1443 ~g-~llTgg~Dg~IrlWDl~~~~~s~~~~g~~ 1473 (1553)
+- .+++||.||.|..=|+.++..+..++...
T Consensus 266 sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~d 297 (735)
T KOG0308|consen 266 SFTHVYSGGRDGNIYRTDLRNPAKSTLICKED 297 (735)
T ss_pred CcceEEecCCCCcEEecccCCchhheEeecCC
Confidence 76 68899999999999999987777666543
No 481
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.87 E-value=9.9e-21 Score=203.93 Aligned_cols=251 Identities=14% Similarity=0.184 Sum_probs=181.6
Q ss_pred ccCeeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEee
Q 000410 1139 CSAVNEIAISH-DHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVD 1217 (1553)
Q Consensus 1139 ~~~V~~l~~sp-d~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~ 1217 (1553)
.+.|.+|+||| ...+++.||.||+||+|+++..... .+ .....|.++|.|++|+.+|..+++|+.|+.+++||+.
T Consensus 27 ~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~---~~-ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~ 102 (347)
T KOG0647|consen 27 EDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQL---VP-KAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLA 102 (347)
T ss_pred ccchheeEeccccCceEEecccCCceEEEEEecCCcc---cc-hhhhccCCCeEEEEEccCCceEEeeccCCceEEEEcc
Confidence 46799999999 4557779999999999999863211 12 2345688899999999999999999999999999997
Q ss_pred ecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEE
Q 000410 1218 HISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLV 1297 (1553)
Q Consensus 1218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~ 1297 (1553)
+.+ ... ...|..+|..++|-+... ...|++|++|.+|+.||.|....+.+++.+ +.+.++
T Consensus 103 S~Q--------------~~~-v~~Hd~pvkt~~wv~~~~-~~cl~TGSWDKTlKfWD~R~~~pv~t~~LP---eRvYa~- 162 (347)
T KOG0647|consen 103 SGQ--------------VSQ-VAAHDAPVKTCHWVPGMN-YQCLVTGSWDKTLKFWDTRSSNPVATLQLP---ERVYAA- 162 (347)
T ss_pred CCC--------------eee-eeecccceeEEEEecCCC-cceeEecccccceeecccCCCCeeeeeecc---ceeeeh-
Confidence 421 111 224677788888877632 358999999999999999999999888763 334444
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCc-ccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCC-
Q 000410 1298 TGPCGNWFVSGSSRGVLTLWDLRFLV-PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENG- 1375 (1553)
Q Consensus 1298 ~sp~g~~LvsGs~dG~l~lWDlr~~~-~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg- 1375 (1553)
+-....+++++.+..|.+++|+... ..+..+.+-...+.++.+| .+.. ..+.|+-.|.+.|..+..+
T Consensus 163 -Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f-~d~~---------~~alGsiEGrv~iq~id~~~ 231 (347)
T KOG0647|consen 163 -DVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACF-QDKD---------GFALGSIEGRVAIQYIDDPN 231 (347)
T ss_pred -hccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEE-ecCC---------ceEeeeecceEEEEecCCCC
Confidence 3345689999999999999997543 3333333444456677663 3322 3488999999999988765
Q ss_pred -cEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCC-CeEEEccCCC
Q 000410 1376 -SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG-GDLLTGGTDL 1453 (1553)
Q Consensus 1376 -~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~-g~llTgg~Dg 1453 (1553)
.--.+|+.+..... ..+....|++++|+|. |.|+|+|+||
T Consensus 232 ~~~nFtFkCHR~~~~--------------------------------------~~~~VYaVNsi~FhP~hgtlvTaGsDG 273 (347)
T KOG0647|consen 232 PKDNFTFKCHRSTNS--------------------------------------VNDDVYAVNSIAFHPVHGTLVTAGSDG 273 (347)
T ss_pred ccCceeEEEeccCCC--------------------------------------CCCceEEecceEeecccceEEEecCCc
Confidence 32334443332100 0112347899999995 6999999999
Q ss_pred eEEEEeCCC
Q 000410 1454 KIRRWDHCS 1462 (1553)
Q Consensus 1454 ~IrlWDl~~ 1462 (1553)
++.|||-..
T Consensus 274 tf~FWDkda 282 (347)
T KOG0647|consen 274 TFSFWDKDA 282 (347)
T ss_pred eEEEecchh
Confidence 999999653
No 482
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.87 E-value=6e-21 Score=217.31 Aligned_cols=230 Identities=20% Similarity=0.237 Sum_probs=169.4
Q ss_pred ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCcc-ccccccceeeecCCCceEEEEEecCCcEEEEEeC
Q 000410 1129 GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEK-DISFRSRLTYHLEGSRALCTMMLRHSAQVVVGAC 1207 (1553)
Q Consensus 1129 G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~-~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~ 1207 (1553)
+..-..|.+|+..|.++++.|.|..|+|||.|-+|+.||...+.. ...++...- +.+..|.++.|++.|+.|++.+.
T Consensus 157 ~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P--~E~h~i~sl~ys~Tg~~iLvvsg 234 (641)
T KOG0772|consen 157 GSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQP--CETHQINSLQYSVTGDQILVVSG 234 (641)
T ss_pred ccceEeccCCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCc--ccccccceeeecCCCCeEEEEec
Confidence 345667899999999999999999999999999999999997762 223333222 23446999999999999999998
Q ss_pred CCcEEEEEeeecccCCCccccccccccceec--ccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCc-cccee
Q 000410 1208 DGIIHMFSVDHISRGLGNVEKYSGISDIKKK--DTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS-NTWTL 1284 (1553)
Q Consensus 1208 DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~-~~~~l 1284 (1553)
...++|+|-+-.. ...-..+-..++.. ..+|-+.+++.+|+|.. .+.+++++.||++++||+...+ ....+
T Consensus 235 ~aqakl~DRdG~~----~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~--k~~FlT~s~DgtlRiWdv~~~k~q~qVi 308 (641)
T KOG0772|consen 235 SAQAKLLDRDGFE----IVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDN--KEEFLTCSYDGTLRIWDVNNTKSQLQVI 308 (641)
T ss_pred CcceeEEccCCce----eeeeeccchhhhhhhccCCceeeeeccccccCc--ccceEEecCCCcEEEEecCCchhheeEE
Confidence 8899999876210 00111111222322 23567788999999995 5699999999999999997643 22222
Q ss_pred c---cCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--ccceeeccccC--CcceEEeecCCCCCccccCCCCE
Q 000410 1285 K---AIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLV--PVNSWQYSQVC--PIEKMCLFVPPPNAAVSTTARPL 1357 (1553)
Q Consensus 1285 ~---~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~--~l~s~~~~~~~--~I~~l~~~~p~~~~~~~s~~~~~ 1357 (1553)
+ ..+..-.+++++|+|+|.|+++|..||.|.+||.+... +.......|.. .|+++.| +.+|++
T Consensus 309 k~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~F----------S~dg~~ 378 (641)
T KOG0772|consen 309 KTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISF----------SYDGNY 378 (641)
T ss_pred eeccCCCcccCceeeecCCCcchhhhcccCCceeeeecCCcccccceEeeeccCCCCceeEEEe----------ccccch
Confidence 2 22344579999999999999999999999999986442 33333333433 5666666 556779
Q ss_pred EEEEEcCCeEEEEEcCCCc
Q 000410 1358 IYVAAGCNEVSLWNAENGS 1376 (1553)
Q Consensus 1358 l~s~s~dg~V~vWDl~tg~ 1376 (1553)
|++-+.|+.+++||++..+
T Consensus 379 LlSRg~D~tLKvWDLrq~k 397 (641)
T KOG0772|consen 379 LLSRGFDDTLKVWDLRQFK 397 (641)
T ss_pred hhhccCCCceeeeeccccc
Confidence 9999999999999998653
No 483
>PTZ00420 coronin; Provisional
Probab=99.87 E-value=1.7e-20 Score=232.80 Aligned_cols=226 Identities=12% Similarity=0.164 Sum_probs=166.3
Q ss_pred Cccc-CccEeeeccccccCeeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCcccc-c-cccceeeecCCCceEEEEEecCC
Q 000410 1124 GWRP-RGILVAHLQEHCSAVNEIAISHD-HSFFVSASDDSTVKVWDSRKLEKDI-S-FRSRLTYHLEGSRALCTMMLRHS 1199 (1553)
Q Consensus 1124 ~W~p-~G~lv~~l~~H~~~V~~l~~spd-~~~laSgS~DGtVkIWD~~~~~~~~-~-~~~~~~~~~h~~~I~~l~f~~~~ 1199 (1553)
.|+. +...+..+.+|.++|++++|+|+ +.+|||||.||+|+|||+.+..... . ......+.+|...|.+++|+|++
T Consensus 58 L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g 137 (568)
T PTZ00420 58 LENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMN 137 (568)
T ss_pred eeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCC
Confidence 4652 34578899999999999999997 7899999999999999997542111 0 11334677899999999999988
Q ss_pred cE-EEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCC
Q 000410 1200 AQ-VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN 1278 (1553)
Q Consensus 1200 ~~-las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~ 1278 (1553)
.. +++|+.||+|+|||+.... ..... .+...+.+++|+++ |.+|++++.|+.|++||+|++
T Consensus 138 ~~iLaSgS~DgtIrIWDl~tg~-------------~~~~i--~~~~~V~Slswspd---G~lLat~s~D~~IrIwD~Rsg 199 (568)
T PTZ00420 138 YYIMCSSGFDSFVNIWDIENEK-------------RAFQI--NMPKKLSSLKWNIK---GNLLSGTCVGKHMHIIDPRKQ 199 (568)
T ss_pred CeEEEEEeCCCeEEEEECCCCc-------------EEEEE--ecCCcEEEEEECCC---CCEEEEEecCCEEEEEECCCC
Confidence 65 5789999999999997311 11111 23456889999998 779999999999999999999
Q ss_pred cccceeccCCCCcceEEE-----EEcCCCCEEEEEeCCC----cEEEEeCCC-CcccceeeccccCCcceEEeecCCCCC
Q 000410 1279 SNTWTLKAIPEEGYVSSL-----VTGPCGNWFVSGSSRG----VLTLWDLRF-LVPVNSWQYSQVCPIEKMCLFVPPPNA 1348 (1553)
Q Consensus 1279 ~~~~~l~~~~h~g~Itsl-----~~sp~g~~LvsGs~dG----~l~lWDlr~-~~~l~s~~~~~~~~I~~l~~~~p~~~~ 1348 (1553)
+.+.++.. |.+.+.+. .|++++.++++++.++ .|+|||+|. ..++..+.......+-...+ .+
T Consensus 200 ~~i~tl~g--H~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~-D~---- 272 (568)
T PTZ00420 200 EIASSFHI--HDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHY-DE---- 272 (568)
T ss_pred cEEEEEec--ccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEee-eC----
Confidence 98888765 76654433 3458888988877664 799999995 55665554422211111112 11
Q ss_pred ccccCCCCEEEEEEcCCeEEEEEcCCCcEE
Q 000410 1349 AVSTTARPLIYVAAGCNEVSLWNAENGSCH 1378 (1553)
Q Consensus 1349 ~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~ 1378 (1553)
..+.++++|++|+.|++|++..+.+.
T Consensus 273 ----~tg~l~lsGkGD~tIr~~e~~~~~~~ 298 (568)
T PTZ00420 273 ----STGLIYLIGKGDGNCRYYQHSLGSIR 298 (568)
T ss_pred ----CCCCEEEEEECCCeEEEEEccCCcEE
Confidence 23568889999999999999877543
No 484
>PTZ00421 coronin; Provisional
Probab=99.87 E-value=1.8e-20 Score=231.85 Aligned_cols=220 Identities=12% Similarity=0.175 Sum_probs=164.7
Q ss_pred eccccccCeeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCccc-cccccceeeecCCCceEEEEEecCC-cEEEEEeCCCc
Q 000410 1134 HLQEHCSAVNEIAISH-DHSFFVSASDDSTVKVWDSRKLEKD-ISFRSRLTYHLEGSRALCTMMLRHS-AQVVVGACDGI 1210 (1553)
Q Consensus 1134 ~l~~H~~~V~~l~~sp-d~~~laSgS~DGtVkIWD~~~~~~~-~~~~~~~~~~~h~~~I~~l~f~~~~-~~las~s~DG~ 1210 (1553)
.+.+|.+.|++++|+| ++.+|+|||.||+|+|||+.+.... ........+.+|...|.+++|+|.+ +.|++|+.||+
T Consensus 70 ~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~Dgt 149 (493)
T PTZ00421 70 ILLGQEGPIIDVAFNPFDPQKLFTASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMV 149 (493)
T ss_pred eEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCE
Confidence 4679999999999999 8889999999999999999764311 1112445678899999999999975 78999999999
Q ss_pred EEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCC
Q 000410 1211 IHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEE 1290 (1553)
Q Consensus 1211 I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~ 1290 (1553)
|+|||+.+.. .......|...|.+++|+|+ +.+|++++.|+.|++||+|+++.+.++.. |.
T Consensus 150 VrIWDl~tg~--------------~~~~l~~h~~~V~sla~spd---G~lLatgs~Dg~IrIwD~rsg~~v~tl~~--H~ 210 (493)
T PTZ00421 150 VNVWDVERGK--------------AVEVIKCHSDQITSLEWNLD---GSLLCTTSKDKKLNIIDPRDGTIVSSVEA--HA 210 (493)
T ss_pred EEEEECCCCe--------------EEEEEcCCCCceEEEEEECC---CCEEEEecCCCEEEEEECCCCcEEEEEec--CC
Confidence 9999997311 11122345667899999998 77999999999999999999998887765 55
Q ss_pred cc-eEEEEEcCCCCEEEEEe----CCCcEEEEeCCCCc-ccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEE-c
Q 000410 1291 GY-VSSLVTGPCGNWFVSGS----SRGVLTLWDLRFLV-PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAA-G 1363 (1553)
Q Consensus 1291 g~-Itsl~~sp~g~~LvsGs----~dG~l~lWDlr~~~-~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s-~ 1363 (1553)
+. +..+.|.+++..+++++ .||.|++||+|... ++....... .....+.++++ ++.++++++ +
T Consensus 211 ~~~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~-~~~~~~~~~d~---------d~~~L~lggkg 280 (493)
T PTZ00421 211 SAKSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQ-SSALFIPFFDE---------DTNLLYIGSKG 280 (493)
T ss_pred CCcceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCC-CCceEEEEEcC---------CCCEEEEEEeC
Confidence 44 45677888877776543 47999999999754 333332222 22222223233 455777776 6
Q ss_pred CCeEEEEEcCCCcEEEEEe
Q 000410 1364 CNEVSLWNAENGSCHQVLR 1382 (1553)
Q Consensus 1364 dg~V~vWDl~tg~~~~~l~ 1382 (1553)
|+.|++||+.+++......
T Consensus 281 Dg~Iriwdl~~~~~~~~~~ 299 (493)
T PTZ00421 281 EGNIRCFELMNERLTFCSS 299 (493)
T ss_pred CCeEEEEEeeCCceEEEee
Confidence 9999999999988766544
No 485
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.87 E-value=3.2e-21 Score=233.99 Aligned_cols=257 Identities=15% Similarity=0.221 Sum_probs=198.1
Q ss_pred eeecc-ccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCC----------------------------Ccc----cc---
Q 000410 1132 VAHLQ-EHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRK----------------------------LEK----DI--- 1175 (1553)
Q Consensus 1132 v~~l~-~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~----------------------------~~~----~~--- 1175 (1553)
...+. +|+++|.++.||+||+|||||+.||.|+||.+.. .+. ..
T Consensus 259 ~Qe~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~ 338 (712)
T KOG0283|consen 259 VQEISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSS 338 (712)
T ss_pred eeccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccc
Confidence 45566 8999999999999999999999999999998765 000 00
Q ss_pred -------------------ccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCCCccccccccccce
Q 000410 1176 -------------------SFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIK 1236 (1553)
Q Consensus 1176 -------------------~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~ 1236 (1553)
.-++.+.|.+|.+.|.++.|+.+ +.|+++|.|.||++|++... .++.
T Consensus 339 ~~~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~-------------~CL~ 404 (712)
T KOG0283|consen 339 SRKGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRK-------------ECLK 404 (712)
T ss_pred cccccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCc-------------ceee
Confidence 01345567899999999999865 57889999999999999631 1222
Q ss_pred ecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEE
Q 000410 1237 KKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTL 1316 (1553)
Q Consensus 1237 ~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~l 1316 (1553)
. ..|...|+|++|+|.+ .+++++|+-||.|++|++...+.+.-... +..||++||.|+|+..++||.+|.+++
T Consensus 405 ~--F~HndfVTcVaFnPvD--DryFiSGSLD~KvRiWsI~d~~Vv~W~Dl---~~lITAvcy~PdGk~avIGt~~G~C~f 477 (712)
T KOG0283|consen 405 V--FSHNDFVTCVAFNPVD--DRYFISGSLDGKVRLWSISDKKVVDWNDL---RDLITAVCYSPDGKGAVIGTFNGYCRF 477 (712)
T ss_pred E--EecCCeeEEEEecccC--CCcEeecccccceEEeecCcCeeEeehhh---hhhheeEEeccCCceEEEEEeccEEEE
Confidence 2 2577899999999985 56999999999999999998777644443 478999999999999999999999999
Q ss_pred EeCCCCcccceeeccc-------cCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCC
Q 000410 1317 WDLRFLVPVNSWQYSQ-------VCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGD 1389 (1553)
Q Consensus 1317 WDlr~~~~l~s~~~~~-------~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~ 1389 (1553)
|+.+..+....++... ...|+.+.+ .|... ..|++.+.|..|+|+|.++-+.+..|.+.....
T Consensus 478 Y~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~-~p~~~--------~~vLVTSnDSrIRI~d~~~~~lv~KfKG~~n~~- 547 (712)
T KOG0283|consen 478 YDTEGLKLVSDFHIRLHNKKKKQGKRITGLQF-FPGDP--------DEVLVTSNDSRIRIYDGRDKDLVHKFKGFRNTS- 547 (712)
T ss_pred EEccCCeEEEeeeEeeccCccccCceeeeeEe-cCCCC--------CeEEEecCCCceEEEeccchhhhhhhcccccCC-
Confidence 9999887777766432 226888888 44332 268899999999999997766666665322100
Q ss_pred CccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccCCCeEEEEeCCCC
Q 000410 1390 TEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSP 1463 (1553)
Q Consensus 1390 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWDl~~~ 1463 (1553)
.=....|+.+| .|++|+.|..|++|+....
T Consensus 548 --------------------------------------------SQ~~Asfs~Dgk~IVs~seDs~VYiW~~~~~ 578 (712)
T KOG0283|consen 548 --------------------------------------------SQISASFSSDGKHIVSASEDSWVYIWKNDSF 578 (712)
T ss_pred --------------------------------------------cceeeeEccCCCEEEEeecCceEEEEeCCCC
Confidence 11233455677 7889999999999998543
No 486
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=3.2e-20 Score=201.24 Aligned_cols=253 Identities=17% Similarity=0.238 Sum_probs=186.2
Q ss_pred ccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeee
Q 000410 1139 CSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDH 1218 (1553)
Q Consensus 1139 ~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~ 1218 (1553)
.+.|.++.|+|.+..|+.+|.||+++++|+...+ .++.+ .|++++++++|.+ ...+++|+-||.|+.+|+.+
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~------l~~~~-~~~~plL~c~F~d-~~~~~~G~~dg~vr~~Dln~ 84 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANS------LKLKF-KHGAPLLDCAFAD-ESTIVTGGLDGQVRRYDLNT 84 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchh------hhhhe-ecCCceeeeeccC-CceEEEeccCceEEEEEecC
Confidence 4789999999999999999999999999998753 22233 3677899999986 56788999999999999984
Q ss_pred cccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEEE
Q 000410 1219 ISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVT 1298 (1553)
Q Consensus 1219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~ 1298 (1553)
.. ......|...+.|+++.+. ...+++|++|++|++||.|......++.. ...|.|+..
T Consensus 85 ~~---------------~~~igth~~~i~ci~~~~~---~~~vIsgsWD~~ik~wD~R~~~~~~~~d~---~kkVy~~~v 143 (323)
T KOG1036|consen 85 GN---------------EDQIGTHDEGIRCIEYSYE---VGCVISGSWDKTIKFWDPRNKVVVGTFDQ---GKKVYCMDV 143 (323)
T ss_pred Cc---------------ceeeccCCCceEEEEeecc---CCeEEEcccCccEEEEecccccccccccc---CceEEEEec
Confidence 11 0112346778999999977 45899999999999999998766666654 336776665
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCccccee-eccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCC--
Q 000410 1299 GPCGNWFVSGSSRGVLTLWDLRFLVPVNSW-QYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENG-- 1375 (1553)
Q Consensus 1299 sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~-~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg-- 1375 (1553)
.|+.|++|+.+..+.+||+|........ ...-.-.+.++++ .|.. .-.++++-+|.|.+=.+...
T Consensus 144 --~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~-~pn~---------eGy~~sSieGRVavE~~d~s~~ 211 (323)
T KOG1036|consen 144 --SGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVAL-VPNG---------EGYVVSSIEGRVAVEYFDDSEE 211 (323)
T ss_pred --cCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEE-ecCC---------CceEEEeecceEEEEccCCchH
Confidence 5789999999999999999975443211 1112235677777 4533 23678888999888666655
Q ss_pred --cEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCC-CeEEEccCC
Q 000410 1376 --SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG-GDLLTGGTD 1452 (1553)
Q Consensus 1376 --~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~-g~llTgg~D 1452 (1553)
....+|+.|..... ......+|++|+|+|- ++++|||+|
T Consensus 212 ~~skkyaFkCHr~~~~--------------------------------------~~~~~yPVNai~Fhp~~~tfaTgGsD 253 (323)
T KOG1036|consen 212 AQSKKYAFKCHRLSEK--------------------------------------DTEIIYPVNAIAFHPIHGTFATGGSD 253 (323)
T ss_pred HhhhceeEEeeecccC--------------------------------------CceEEEEeceeEeccccceEEecCCC
Confidence 44556665443111 0112247999999994 689999999
Q ss_pred CeEEEEeCCCCCCceEEe
Q 000410 1453 LKIRRWDHCSPGRSYCIC 1470 (1553)
Q Consensus 1453 g~IrlWDl~~~~~s~~~~ 1470 (1553)
|.|-+||+.+.++...+.
T Consensus 254 G~V~~Wd~~~rKrl~q~~ 271 (323)
T KOG1036|consen 254 GIVNIWDLFNRKRLKQLA 271 (323)
T ss_pred ceEEEccCcchhhhhhcc
Confidence 999999998877665443
No 487
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.87 E-value=2e-21 Score=216.73 Aligned_cols=255 Identities=20% Similarity=0.283 Sum_probs=203.7
Q ss_pred CCcccCc---cEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCC
Q 000410 1123 SGWRPRG---ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHS 1199 (1553)
Q Consensus 1123 ~~W~p~G---~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~ 1199 (1553)
..|+..| .++.+|.|-.++|+++.|.++++.++++|.|+.+++|++.... .+.++.+|...|+++.|.-..
T Consensus 200 k~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnvd~~r------~~~TLsGHtdkVt~ak~~~~~ 273 (459)
T KOG0288|consen 200 KLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNVDSLR------LRHTLSGHTDKVTAAKFKLSH 273 (459)
T ss_pred hhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeeccchh------hhhhhcccccceeeehhhccc
Confidence 4688443 3789999999999999999999999999999999999998764 666888999999999998877
Q ss_pred cEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCc
Q 000410 1200 AQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNS 1279 (1553)
Q Consensus 1200 ~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~ 1279 (1553)
..+++|+.|.+|+.||+.. .. +.+.... +..+..+..++ ..+++|-.|+.|++||+|++.
T Consensus 274 ~~vVsgs~DRtiK~WDl~k-~~------------C~kt~l~--~S~cnDI~~~~-----~~~~SgH~DkkvRfwD~Rs~~ 333 (459)
T KOG0288|consen 274 SRVVSGSADRTIKLWDLQK-AY------------CSKTVLP--GSQCNDIVCSI-----SDVISGHFDKKVRFWDIRSAD 333 (459)
T ss_pred cceeeccccchhhhhhhhh-hh------------eeccccc--cccccceEecc-----eeeeecccccceEEEeccCCc
Confidence 7799999999999999973 11 1111111 12223333332 278888999999999999999
Q ss_pred ccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEE
Q 000410 1280 NTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1359 (1553)
Q Consensus 1280 ~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~ 1359 (1553)
+....+. .|.|+|+..+++|..|++++.|.++.+.|+|+......+....- +. ..+...+.|++++.+++
T Consensus 334 ~~~sv~~---gg~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~----k~---asDwtrvvfSpd~~Yva 403 (459)
T KOG0288|consen 334 KTRSVPL---GGRVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGF----KC---ASDWTRVVFSPDGSYVA 403 (459)
T ss_pred eeeEeec---CcceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeecccc----cc---ccccceeEECCCCceee
Confidence 9988876 57999999999999999999999999999998776655544211 10 22344556677788999
Q ss_pred EEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEec
Q 000410 1360 VAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1439 (1553)
Q Consensus 1360 s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1439 (1553)
+||.||.|+||++.+|+|..++..... .++|+++.
T Consensus 404 AGS~dgsv~iW~v~tgKlE~~l~~s~s---------------------------------------------~~aI~s~~ 438 (459)
T KOG0288|consen 404 AGSADGSVYIWSVFTGKLEKVLSLSTS---------------------------------------------NAAITSLS 438 (459)
T ss_pred eccCCCcEEEEEccCceEEEEeccCCC---------------------------------------------CcceEEEE
Confidence 999999999999999999888763322 12699999
Q ss_pred cCCCC-eEEEccCCCeEEEE
Q 000410 1440 PLPGG-DLLTGGTDLKIRRW 1458 (1553)
Q Consensus 1440 ~sp~g-~llTgg~Dg~IrlW 1458 (1553)
|+|.| .+++++.++.+++|
T Consensus 439 W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 439 WNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred EcCCCchhhcccCCcceEec
Confidence 99988 68899999999999
No 488
>PTZ00420 coronin; Provisional
Probab=99.86 E-value=6.8e-20 Score=227.41 Aligned_cols=241 Identities=15% Similarity=0.140 Sum_probs=170.6
Q ss_pred EEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecC-CcEEEEEeCCCcEEEEEeeecccCCCcccccccccc
Q 000410 1156 SASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH-SAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISD 1234 (1553)
Q Consensus 1156 SgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~-~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~ 1234 (1553)
+|+.+|.|++|+..+.. ....+.+|.+.|.+++|+|+ ++.||+|+.||+|+|||+...... .... ..
T Consensus 49 gGG~~gvI~L~~~~r~~------~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~---~~~i---~~ 116 (568)
T PTZ00420 49 GGGLIGAIRLENQMRKP------PVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDES---VKEI---KD 116 (568)
T ss_pred CCCceeEEEeeecCCCc------eEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCcc---cccc---cc
Confidence 37789999999987542 44567889999999999996 789999999999999999631100 0000 01
Q ss_pred ceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcE
Q 000410 1235 IKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVL 1314 (1553)
Q Consensus 1235 ~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l 1314 (1553)
.......|...|.+++|+|++ ..++++++.|++|++||+++++....+. +.+.|++++|+|+|.+|++|+.||.|
T Consensus 117 p~~~L~gH~~~V~sVaf~P~g--~~iLaSgS~DgtIrIWDl~tg~~~~~i~---~~~~V~SlswspdG~lLat~s~D~~I 191 (568)
T PTZ00420 117 PQCILKGHKKKISIIDWNPMN--YYIMCSSGFDSFVNIWDIENEKRAFQIN---MPKKLSSLKWNIKGNLLSGTCVGKHM 191 (568)
T ss_pred ceEEeecCCCcEEEEEECCCC--CeEEEEEeCCCeEEEEECCCCcEEEEEe---cCCcEEEEEECCCCCEEEEEecCCEE
Confidence 111223567789999999984 3367899999999999999998777664 45689999999999999999999999
Q ss_pred EEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCC----eEEEEEcCC-CcEEEEEecccCCCC
Q 000410 1315 TLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN----EVSLWNAEN-GSCHQVLRTANYDGD 1389 (1553)
Q Consensus 1315 ~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg----~V~vWDl~t-g~~~~~l~~~~~~~~ 1389 (1553)
++||+|.+..+..+.. |.+.+....++. ..+++++.++++++.++ +|+|||+++ ++++..+.....
T Consensus 192 rIwD~Rsg~~i~tl~g-H~g~~~s~~v~~-----~~fs~d~~~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~--- 262 (568)
T PTZ00420 192 HIIDPRKQEIASSFHI-HDGGKNTKNIWI-----DGLGGDDNYILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNA--- 262 (568)
T ss_pred EEEECCCCcEEEEEec-ccCCceeEEEEe-----eeEcCCCCEEEEEEcCCCCccEEEEEECCCCCCceEEEEecCC---
Confidence 9999999988887765 444433322211 11234556788877663 799999985 444443321110
Q ss_pred CccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccCCCeEEEEeCCCCC
Q 000410 1390 TEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPG 1464 (1553)
Q Consensus 1390 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWDl~~~~ 1464 (1553)
...+......++| .+++|+.|+.||+|++..+.
T Consensus 263 ------------------------------------------~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~ 296 (568)
T PTZ00420 263 ------------------------------------------SAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGS 296 (568)
T ss_pred ------------------------------------------ccceEEeeeCCCCCEEEEEECCCeEEEEEccCCc
Confidence 0012222223456 46699999999999997653
No 489
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.86 E-value=6.7e-21 Score=204.62 Aligned_cols=268 Identities=20% Similarity=0.322 Sum_probs=203.7
Q ss_pred CCCcc-cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeC------CC--------Cc--------------
Q 000410 1122 DSGWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDS------RK--------LE-------------- 1172 (1553)
Q Consensus 1122 ~~~W~-p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~------~~--------~~-------------- 1172 (1553)
...|. ..|.|+.++.||.+.|++|+|++.+.+++|||.|++..||.. .+ .+
T Consensus 172 A~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d 251 (481)
T KOG0300|consen 172 ARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTD 251 (481)
T ss_pred eeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccc
Confidence 34798 559999999999999999999999999999999999999972 11 00
Q ss_pred ---cc--cccc-cceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEE
Q 000410 1173 ---KD--ISFR-SRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIV 1246 (1553)
Q Consensus 1173 ---~~--~~~~-~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 1246 (1553)
+. .+.+ +...+.+|.+.|.+..|..+|+.++++++|.+..+||+++. .+.....+|....
T Consensus 252 ~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEtg--------------e~v~~LtGHd~EL 317 (481)
T KOG0300|consen 252 SSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVETG--------------EVVNILTGHDSEL 317 (481)
T ss_pred cccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeeccC--------------ceeccccCcchhc
Confidence 00 0112 34567789999999999999999999999999999999851 2223334566666
Q ss_pred EEEEecCCCCcceEEEEEeCCceEEEEeCCCC-cccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCC-cc
Q 000410 1247 TLVNYNTDNCASHMFMYSTQNCGIHLWDTRSN-SNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFL-VP 1324 (1553)
Q Consensus 1247 ~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~-~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~-~~ 1324 (1553)
+.++.+|. +.++++++.|.+.++||.|.. ..+..|++ |...|++..|..+ ..+++|+.|.+|++||+|.. .+
T Consensus 318 tHcstHpt---QrLVvTsSrDtTFRLWDFReaI~sV~VFQG--HtdtVTS~vF~~d-d~vVSgSDDrTvKvWdLrNMRsp 391 (481)
T KOG0300|consen 318 THCSTHPT---QRLVVTSSRDTTFRLWDFREAIQSVAVFQG--HTDTVTSVVFNTD-DRVVSGSDDRTVKVWDLRNMRSP 391 (481)
T ss_pred cccccCCc---ceEEEEeccCceeEeccchhhcceeeeecc--cccceeEEEEecC-CceeecCCCceEEEeeeccccCc
Confidence 66678888 789999999999999999943 23445655 9999999999875 47899999999999999864 35
Q ss_pred cceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCC
Q 000410 1325 VNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSS 1404 (1553)
Q Consensus 1325 l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~ 1404 (1553)
+.++.. .++++++.. +..++.++.--.+..|++||+. |..+..+...
T Consensus 392 lATIRt--dS~~NRvav----------s~g~~iIAiPhDNRqvRlfDln-G~RlaRlPrt-------------------- 438 (481)
T KOG0300|consen 392 LATIRT--DSPANRVAV----------SKGHPIIAIPHDNRQVRLFDLN-GNRLARLPRT-------------------- 438 (481)
T ss_pred ceeeec--CCccceeEe----------ecCCceEEeccCCceEEEEecC-CCccccCCcc--------------------
Confidence 555543 456777766 2234567777778899999997 4433222210
Q ss_pred CCCCCccccccccccccccccCCCCCCccCcEEeccCCCC---eEEEccCCCeEEEEeCCCCC
Q 000410 1405 RSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG---DLLTGGTDLKIRRWDHCSPG 1464 (1553)
Q Consensus 1405 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g---~llTgg~Dg~IrlWDl~~~~ 1464 (1553)
...+|..-|.|++|..+. .|+|+|-|+.+.=|.+..+.
T Consensus 439 ----------------------sRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~gW~in~p~ 479 (481)
T KOG0300|consen 439 ----------------------SRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVAGWKINTPT 479 (481)
T ss_pred ----------------------cccccceeeeeeeccccCcccccccccccceeeeeEecccC
Confidence 113566679999997543 79999999999999987664
No 490
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.86 E-value=1.5e-20 Score=200.97 Aligned_cols=309 Identities=17% Similarity=0.233 Sum_probs=209.5
Q ss_pred ccccCeeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCc--c--cccccc-----ceeeecCCCceEEEEEec-CCcEEEEE
Q 000410 1137 EHCSAVNEIAISH-DHSFFVSASDDSTVKVWDSRKLE--K--DISFRS-----RLTYHLEGSRALCTMMLR-HSAQVVVG 1205 (1553)
Q Consensus 1137 ~H~~~V~~l~~sp-d~~~laSgS~DGtVkIWD~~~~~--~--~~~~~~-----~~~~~~h~~~I~~l~f~~-~~~~las~ 1205 (1553)
-|.+.|+++.+.+ .|++++||+.||.+.|||++... . ....+. +..-.+|.-.|.++.|.| +...|.++
T Consensus 41 ~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtss 120 (397)
T KOG4283|consen 41 PHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSS 120 (397)
T ss_pred cCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeecc
Confidence 4889999999987 68999999999999999998644 1 111111 112235666899999999 56688899
Q ss_pred eCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceec
Q 000410 1206 ACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLK 1285 (1553)
Q Consensus 1206 s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~ 1285 (1553)
|.|.+++|||.++.+ ......-...|...+++|-..+.-++++|+.+..|++.|+.+|.+..+|.
T Consensus 121 SFDhtlKVWDtnTlQ---------------~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~Ls 185 (397)
T KOG4283|consen 121 SFDHTLKVWDTNTLQ---------------EAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLS 185 (397)
T ss_pred cccceEEEeecccce---------------eeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeec
Confidence 999999999997521 11122234456666777765444588999999999999999999999998
Q ss_pred cCCCCcceEEEEEcCCCCE-EEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcC
Q 000410 1286 AIPEEGYVSSLVTGPCGNW-FVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGC 1364 (1553)
Q Consensus 1286 ~~~h~g~Itsl~~sp~g~~-LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~d 1364 (1553)
+ |.+.|.++.|+|...| |++|+.||.+++||+|.- .
T Consensus 186 G--Hr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRra-----------------------------------------s 222 (397)
T KOG4283|consen 186 G--HRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRA-----------------------------------------S 222 (397)
T ss_pred c--ccCceEEEEeccCceeEEEecCCCceEEEEEeecc-----------------------------------------c
Confidence 7 9999999999999888 578999999999998721 1
Q ss_pred CeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC
Q 000410 1365 NEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG 1444 (1553)
Q Consensus 1365 g~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g 1444 (1553)
|.+++.|..+++....+ +..+.|.+.|..++|..+|
T Consensus 223 gcf~~lD~hn~k~~p~~--------------------------------------------~~n~ah~gkvngla~tSd~ 258 (397)
T KOG4283|consen 223 GCFRVLDQHNTKRPPIL--------------------------------------------KTNTAHYGKVNGLAWTSDA 258 (397)
T ss_pred ceeEEeecccCccCccc--------------------------------------------cccccccceeeeeeecccc
Confidence 22334444433211111 1124566689999999988
Q ss_pred -eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCC
Q 000410 1445 -DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCH 1523 (1553)
Q Consensus 1445 -~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H 1523 (1553)
.++++|.|.++|+|+..+++.+..-.|+-.....-.+-+..+....-.++--...... .--+..+......+..|
T Consensus 259 ~~l~~~gtd~r~r~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~~~~s~vfv~~p~~~~l----all~~~sgs~ir~l~~h 334 (397)
T KOG4283|consen 259 RYLASCGTDDRIRVWNMESGRNTLREFGPIIHNQTTSFAVHIQSMDSDVFVLFPNDGSL----ALLNLLEGSFVRRLSTH 334 (397)
T ss_pred hhhhhccCccceEEeecccCcccccccccccccccccceEEEeecccceEEEEecCCeE----EEEEccCceEEEeeecc
Confidence 6889999999999999999887766665432111111111122111111111000000 00000111122355678
Q ss_pred ccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000410 1524 RDSILSLGSVKLNQRLLISSSRDGAIKVW 1552 (1553)
Q Consensus 1524 ~d~I~~va~~~~~~~~LvSas~DG~IkVW 1552 (1553)
...|++. ++.++.+-..++++||.|.-|
T Consensus 335 ~k~i~c~-~~~~~fq~~~tg~~d~ni~~w 362 (397)
T KOG4283|consen 335 LKRINCA-AYRPDFEQCFTGDMNGNIYMW 362 (397)
T ss_pred cceeeEE-eecCchhhhhccccCCccccc
Confidence 7788877 788888889999999999888
No 491
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.86 E-value=4.5e-20 Score=219.67 Aligned_cols=257 Identities=18% Similarity=0.249 Sum_probs=205.0
Q ss_pred Ccc-cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeec-CCCceEEEEEecCCcE
Q 000410 1124 GWR-PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHL-EGSRALCTMMLRHSAQ 1201 (1553)
Q Consensus 1124 ~W~-p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~-h~~~I~~l~f~~~~~~ 1201 (1553)
+|+ ..|....-..-|...|+++.|+++|.+||.|-.+|+|.|||.....+ ..++.+ |..+|-|++|. +..
T Consensus 201 lW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~------~~~~~~~h~~rvg~laW~--~~~ 272 (484)
T KOG0305|consen 201 LWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKK------TRTLRGSHASRVGSLAWN--SSV 272 (484)
T ss_pred EEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccc------cccccCCcCceeEEEecc--Cce
Confidence 587 44664443344489999999999999999999999999999987653 234445 88999999997 778
Q ss_pred EEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCccc
Q 000410 1202 VVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNT 1281 (1553)
Q Consensus 1202 las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~ 1281 (1553)
+.+|+.||.|..+|++.... ... ....|...|..+.|+++ +.++++|++|+.+.+||.......
T Consensus 273 lssGsr~~~I~~~dvR~~~~------------~~~-~~~~H~qeVCgLkws~d---~~~lASGgnDN~~~Iwd~~~~~p~ 336 (484)
T KOG0305|consen 273 LSSGSRDGKILNHDVRISQH------------VVS-TLQGHRQEVCGLKWSPD---GNQLASGGNDNVVFIWDGLSPEPK 336 (484)
T ss_pred EEEecCCCcEEEEEEecchh------------hhh-hhhcccceeeeeEECCC---CCeeccCCCccceEeccCCCcccc
Confidence 99999999999999984221 111 24467888999999999 789999999999999999888888
Q ss_pred ceeccCCCCcceEEEEEcCC-CCEEEEEe--CCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEE
Q 000410 1282 WTLKAIPEEGYVSSLVTGPC-GNWFVSGS--SRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLI 1358 (1553)
Q Consensus 1282 ~~l~~~~h~g~Itsl~~sp~-g~~LvsGs--~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l 1358 (1553)
.++.. |.+.|..++|+|. ...|++|+ .|+.|++||..++..+..... ...|..+.| .+... -+
T Consensus 337 ~~~~~--H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vdt--gsQVcsL~W-sk~~k---------Ei 402 (484)
T KOG0305|consen 337 FTFTE--HTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVDT--GSQVCSLIW-SKKYK---------EL 402 (484)
T ss_pred EEEec--cceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEeccccc--CCceeeEEE-cCCCC---------EE
Confidence 77766 9999999999995 47888754 699999999999998887654 457888888 55442 45
Q ss_pred EEEEc--CCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcE
Q 000410 1359 YVAAG--CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIR 1436 (1553)
Q Consensus 1359 ~s~s~--dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~ 1436 (1553)
+++.| ++.|.||+..+.+....+. +|...|.
T Consensus 403 ~sthG~s~n~i~lw~~ps~~~~~~l~-----------------------------------------------gH~~RVl 435 (484)
T KOG0305|consen 403 LSTHGYSENQITLWKYPSMKLVAELL-----------------------------------------------GHTSRVL 435 (484)
T ss_pred EEecCCCCCcEEEEeccccceeeeec-----------------------------------------------CCcceeE
Confidence 65554 6789999999865544443 3444699
Q ss_pred EeccCCCC-eEEEccCCCeEEEEeCCCCCC
Q 000410 1437 SLLPLPGG-DLLTGGTDLKIRRWDHCSPGR 1465 (1553)
Q Consensus 1437 sl~~sp~g-~llTgg~Dg~IrlWDl~~~~~ 1465 (1553)
.++++|+| .++||+.|.++|||++-....
T Consensus 436 ~la~SPdg~~i~t~a~DETlrfw~~f~~~~ 465 (484)
T KOG0305|consen 436 YLALSPDGETIVTGAADETLRFWNLFDERP 465 (484)
T ss_pred EEEECCCCCEEEEecccCcEEeccccCCCC
Confidence 99999998 788999999999999976533
No 492
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.85 E-value=4.6e-20 Score=206.82 Aligned_cols=211 Identities=17% Similarity=0.293 Sum_probs=176.8
Q ss_pred cCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEe
Q 000410 1127 PRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGA 1206 (1553)
Q Consensus 1127 p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s 1206 (1553)
|.++++++|.||...|+.+.++|+...++++|.|..++||...... .......|.++|+.+..+|+|.+|++++
T Consensus 249 ~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s------~~~~~~~h~~~V~~ls~h~tgeYllsAs 322 (506)
T KOG0289|consen 249 PSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSS------EPTSSRPHEEPVTGLSLHPTGEYLLSAS 322 (506)
T ss_pred chhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeecccccc------CccccccccccceeeeeccCCcEEEEec
Confidence 7788999999999999999999999999999999999999987543 3445667999999999999999999999
Q ss_pred CCCcEEEEEeeecccCCCccccccccccceeccc-CCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceec
Q 000410 1207 CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDT-KEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLK 1285 (1553)
Q Consensus 1207 ~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~ 1285 (1553)
.||+.-..|+.... .+..... ..+-.+.+.+|||| |.++.+|+.||.|++||+..+..+..|.
T Consensus 323 ~d~~w~Fsd~~~g~-------------~lt~vs~~~s~v~~ts~~fHpD---gLifgtgt~d~~vkiwdlks~~~~a~Fp 386 (506)
T KOG0289|consen 323 NDGTWAFSDISSGS-------------QLTVVSDETSDVEYTSAAFHPD---GLIFGTGTPDGVVKIWDLKSQTNVAKFP 386 (506)
T ss_pred CCceEEEEEccCCc-------------EEEEEeeccccceeEEeeEcCC---ceEEeccCCCceEEEEEcCCccccccCC
Confidence 99999988887311 1111211 23345778899999 8899999999999999999999888775
Q ss_pred cCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCC
Q 000410 1286 AIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCN 1365 (1553)
Q Consensus 1286 ~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg 1365 (1553)
+ |.++|++++|+.+|.||++++.||.|++||+|..+..+++......++..+++ .+. |.+++.++.+=
T Consensus 387 g--ht~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~f-D~S---------Gt~L~~~g~~l 454 (506)
T KOG0289|consen 387 G--HTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSF-DQS---------GTYLGIAGSDL 454 (506)
T ss_pred C--CCCceeEEEeccCceEEEEEecCCeEEEEEehhhcccceeeccccccceeEEE-cCC---------CCeEEeeccee
Confidence 5 99999999999999999999999999999999999999998877778888888 443 55787775555
Q ss_pred eEEEEE
Q 000410 1366 EVSLWN 1371 (1553)
Q Consensus 1366 ~V~vWD 1371 (1553)
.|.+++
T Consensus 455 ~Vy~~~ 460 (506)
T KOG0289|consen 455 QVYICK 460 (506)
T ss_pred EEEEEe
Confidence 555555
No 493
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.85 E-value=9.6e-19 Score=180.26 Aligned_cols=310 Identities=18% Similarity=0.230 Sum_probs=223.1
Q ss_pred cccCccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc------ccccccc---ceeeecCCCceEEEEE
Q 000410 1125 WRPRGILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLE------KDISFRS---RLTYHLEGSRALCTMM 1195 (1553)
Q Consensus 1125 W~p~G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~------~~~~~~~---~~~~~~h~~~I~~l~f 1195 (1553)
-+++-..|..|. ...+|.+++|+|.|.+.+.||+..|.+|-...... ......+ ...-+.|.+.|.|.+|
T Consensus 19 ~k~~f~~i~~l~-dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~w 97 (350)
T KOG0641|consen 19 EKKHFEAINILE-DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAW 97 (350)
T ss_pred cccceEEEEEec-chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEe
Confidence 345555666664 67889999999999999999999999998543211 1111111 1123457789999999
Q ss_pred ecCCcEEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCc-ceEEEEEe-CCceEEEE
Q 000410 1196 LRHSAQVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCA-SHMFMYST-QNCGIHLW 1273 (1553)
Q Consensus 1196 ~~~~~~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s-~~~l~~~s-~dg~I~iw 1273 (1553)
+|.|..+++|+.|.+|++...+.... ...+ .-..++ -|...|..++|-.+..+ +.+|++++ .|..|++-
T Consensus 98 s~~geliatgsndk~ik~l~fn~dt~------~~~g--~dle~n-mhdgtirdl~fld~~~s~~~il~s~gagdc~iy~t 168 (350)
T KOG0641|consen 98 SPCGELIATGSNDKTIKVLPFNADTC------NATG--HDLEFN-MHDGTIRDLAFLDDPESGGAILASAGAGDCKIYIT 168 (350)
T ss_pred cCccCeEEecCCCceEEEEecccccc------cccC--cceeee-ecCCceeeeEEecCCCcCceEEEecCCCcceEEEe
Confidence 99999999999999999988763110 1111 111112 24556677777654333 34555544 47789999
Q ss_pred eCCCCcccceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccc-c-----CCcceEEeecCCCC
Q 000410 1274 DTRSNSNTWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQ-V-----CPIEKMCLFVPPPN 1347 (1553)
Q Consensus 1274 Dlrt~~~~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~-~-----~~I~~l~~~~p~~~ 1347 (1553)
|..+|+....+.+ |.|-|.++ ++-+|-.+++|+.|.+|++||+|-..+++.+.... . +.|..++.
T Consensus 169 dc~~g~~~~a~sg--htghilal-yswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~v------ 239 (350)
T KOG0641|consen 169 DCGRGQGFHALSG--HTGHILAL-YSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAV------ 239 (350)
T ss_pred ecCCCCcceeecC--CcccEEEE-EEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEE------
Confidence 9999998888876 88888876 34567789999999999999999998888775431 1 23444544
Q ss_pred CccccCCCCEEEEEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCC
Q 000410 1348 AAVSTTARPLIYVAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNE 1427 (1553)
Q Consensus 1348 ~~~~s~~~~~l~s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~ 1427 (1553)
.+.|+++++|-.|....+||++.|..++.|..+.
T Consensus 240 ----dpsgrll~sg~~dssc~lydirg~r~iq~f~phs------------------------------------------ 273 (350)
T KOG0641|consen 240 ----DPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHS------------------------------------------ 273 (350)
T ss_pred ----CCCcceeeeccCCCceEEEEeeCCceeeeeCCCc------------------------------------------
Confidence 3457799999999999999999988877775322
Q ss_pred CCCCccCcEEeccCCCC-eEEEccCCCeEEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhh
Q 000410 1428 PPPRLLGIRSLLPLPGG-DLLTGGTDLKIRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKL 1506 (1553)
Q Consensus 1428 ~~~~~~~V~sl~~sp~g-~llTgg~Dg~IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~ 1506 (1553)
..|+|+.|+|.. +++||+.|.+|++=|++.. ... .-...++.|
T Consensus 274 -----adir~vrfsp~a~yllt~syd~~ikltdlqgd-la~--------------------el~~~vv~e---------- 317 (350)
T KOG0641|consen 274 -----ADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGD-LAH--------------------ELPIMVVAE---------- 317 (350)
T ss_pred -----cceeEEEeCCCceEEEEecccceEEEeecccc-hhh--------------------cCceEEEEe----------
Confidence 269999999988 7889999999999998631 000 012334444
Q ss_pred hHHHHHhhhhcCccCCCccceeEEeeeecCCcEEEEEcCCceEEEc
Q 000410 1507 TAKAVLAAAATDSAGCHRDSILSLGSVKLNQRLLISSSRDGAIKVW 1552 (1553)
Q Consensus 1507 ~~~~~~~~~~~~~~~~H~d~I~~va~~~~~~~~LvSas~DG~IkVW 1552 (1553)
|.|.+..+ .|++..--++|.|.|.++-+|
T Consensus 318 ----------------hkdk~i~~-rwh~~d~sfisssadkt~tlw 346 (350)
T KOG0641|consen 318 ----------------HKDKAIQC-RWHPQDFSFISSSADKTATLW 346 (350)
T ss_pred ----------------ccCceEEE-EecCccceeeeccCcceEEEe
Confidence 88877777 688887778999999999999
No 494
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.85 E-value=1.7e-20 Score=212.35 Aligned_cols=285 Identities=16% Similarity=0.223 Sum_probs=216.4
Q ss_pred cccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCcEEEEEeCCCcEEEEE
Q 000410 1136 QEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSAQVVVGACDGIIHMFS 1215 (1553)
Q Consensus 1136 ~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~~las~s~DG~I~vwd 1215 (1553)
-.|..-|.+++.|...+.+.||+. |.|||||+...+ +....+.+-.......|.++...|+|+.|++|+.-.++.|||
T Consensus 416 L~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg-~k~PvsqLdcl~rdnyiRSckL~pdgrtLivGGeastlsiWD 493 (705)
T KOG0639|consen 416 LAHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPG-NKSPVSQLDCLNRDNYIRSCKLLPDGRTLIVGGEASTLSIWD 493 (705)
T ss_pred hccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCC-CCCccccccccCcccceeeeEecCCCceEEeccccceeeeee
Confidence 358899999999999999999986 899999998653 111112222222456789999999999999999999999999
Q ss_pred eeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccCCCCcceEE
Q 000410 1216 VDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAIPEEGYVSS 1295 (1553)
Q Consensus 1216 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~~h~g~Its 1295 (1553)
+..... .+.............++.+|+ .++.+++..||.|.+||++....+..|++ |.+.+.|
T Consensus 494 LAapTp------------rikaeltssapaCyALa~spD---akvcFsccsdGnI~vwDLhnq~~VrqfqG--htDGasc 556 (705)
T KOG0639|consen 494 LAAPTP------------RIKAELTSSAPACYALAISPD---AKVCFSCCSDGNIAVWDLHNQTLVRQFQG--HTDGASC 556 (705)
T ss_pred ccCCCc------------chhhhcCCcchhhhhhhcCCc---cceeeeeccCCcEEEEEcccceeeecccC--CCCCcee
Confidence 974221 122222223345566788998 67999999999999999999999999987 9999999
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeEEEEEcCCC
Q 000410 1296 LVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEVSLWNAENG 1375 (1553)
Q Consensus 1296 l~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V~vWDl~tg 1375 (1553)
+.++++|..|.+|+-|.+|++||+|.+..+....+ .+.|.++.+ +| .+.|+++|-.++.|.|......
T Consensus 557 Idis~dGtklWTGGlDntvRcWDlregrqlqqhdF--~SQIfSLg~-cP---------~~dWlavGMens~vevlh~skp 624 (705)
T KOG0639|consen 557 IDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDF--SSQIFSLGY-CP---------TGDWLAVGMENSNVEVLHTSKP 624 (705)
T ss_pred EEecCCCceeecCCCccceeehhhhhhhhhhhhhh--hhhheeccc-CC---------CccceeeecccCcEEEEecCCc
Confidence 99999999999999999999999999887765443 335655555 44 4569999999999888776544
Q ss_pred cEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCCC-eEEEccCCCe
Q 000410 1376 SCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPGG-DLLTGGTDLK 1454 (1553)
Q Consensus 1376 ~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~g-~llTgg~Dg~ 1454 (1553)
+..+ + .-|...|.++.|.+.| ++++.|.|.-
T Consensus 625 ~kyq-l-----------------------------------------------hlheScVLSlKFa~cGkwfvStGkDnl 656 (705)
T KOG0639|consen 625 EKYQ-L-----------------------------------------------HLHESCVLSLKFAYCGKWFVSTGKDNL 656 (705)
T ss_pred ccee-e-----------------------------------------------cccccEEEEEEecccCceeeecCchhh
Confidence 3211 1 1233478999999988 7889999999
Q ss_pred EEEEeCCCCCCceEEeCCCCCCCCCCccEEEeecCCeEEEEeeecCCcchhhhHHHHHhhhhcCccCCCccceeEEeeee
Q 000410 1455 IRRWDHCSPGRSYCICGPNLKGVGNDEFYETRSSSGVQVVQERKRQPLTSKLTAKAVLAAAATDSAGCHRDSILSLGSVK 1534 (1553)
Q Consensus 1455 IrlWDl~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~H~d~I~~va~~~ 1534 (1553)
+-.|.+--+...+... -...|+++ .++
T Consensus 657 LnawrtPyGasiFqsk----------------------------------------------------E~SsVlsC-DIS 683 (705)
T KOG0639|consen 657 LNAWRTPYGASIFQSK----------------------------------------------------ESSSVLSC-DIS 683 (705)
T ss_pred hhhccCccccceeecc----------------------------------------------------ccCcceee-eec
Confidence 9999865443322111 24578888 689
Q ss_pred cCCcEEEEEcCCceEEEc
Q 000410 1535 LNQRLLISSSRDGAIKVW 1552 (1553)
Q Consensus 1535 ~~~~~LvSas~DG~IkVW 1552 (1553)
.+.++|||||-|...-||
T Consensus 684 ~ddkyIVTGSGdkkATVY 701 (705)
T KOG0639|consen 684 FDDKYIVTGSGDKKATVY 701 (705)
T ss_pred cCceEEEecCCCcceEEE
Confidence 999999999999776665
No 495
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.85 E-value=4.7e-20 Score=199.74 Aligned_cols=245 Identities=15% Similarity=0.197 Sum_probs=189.4
Q ss_pred cEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCc--EEEEEeC
Q 000410 1130 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA--QVVVGAC 1207 (1553)
Q Consensus 1130 ~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~--~las~s~ 1207 (1553)
..+.+++.|.++|+++|++ +.|+||||.|-+|+|||..+.. .......|.+.|+++.|.++.. .|++|++
T Consensus 34 ~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~------qlg~ll~HagsitaL~F~~~~S~shLlS~sd 105 (362)
T KOG0294|consen 34 KPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRK------QLGILLSHAGSITALKFYPPLSKSHLLSGSD 105 (362)
T ss_pred eccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchh------hhcceeccccceEEEEecCCcchhheeeecC
Confidence 3466788999999999995 8999999999999999998754 3345567889999999998764 8999999
Q ss_pred CCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccC
Q 000410 1208 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1287 (1553)
Q Consensus 1208 DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~ 1287 (1553)
||.|.+||+.. ..+......|...|+.++.+|. +++.++.+.|+.++.||+-.|+....+..
T Consensus 106 DG~i~iw~~~~--------------W~~~~slK~H~~~Vt~lsiHPS---~KLALsVg~D~~lr~WNLV~Gr~a~v~~L- 167 (362)
T KOG0294|consen 106 DGHIIIWRVGS--------------WELLKSLKAHKGQVTDLSIHPS---GKLALSVGGDQVLRTWNLVRGRVAFVLNL- 167 (362)
T ss_pred CCcEEEEEcCC--------------eEEeeeecccccccceeEecCC---CceEEEEcCCceeeeehhhcCccceeecc-
Confidence 99999999962 2333444556666999999998 78999999999999999999998877654
Q ss_pred CCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeE
Q 000410 1288 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEV 1367 (1553)
Q Consensus 1288 ~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V 1367 (1553)
....+.+.|+|.|.+++.+..++ |-+|-+...........+ ..+.++.| .++..+++|+.|+.|
T Consensus 168 --~~~at~v~w~~~Gd~F~v~~~~~-i~i~q~d~A~v~~~i~~~--~r~l~~~~-----------l~~~~L~vG~d~~~i 231 (362)
T KOG0294|consen 168 --KNKATLVSWSPQGDHFVVSGRNK-IDIYQLDNASVFREIENP--KRILCATF-----------LDGSELLVGGDNEWI 231 (362)
T ss_pred --CCcceeeEEcCCCCEEEEEeccE-EEEEecccHhHhhhhhcc--ccceeeee-----------cCCceEEEecCCceE
Confidence 23355699999999998888774 889998766555554442 23444443 135679999999999
Q ss_pred EEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccC--CCC-
Q 000410 1368 SLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPL--PGG- 1444 (1553)
Q Consensus 1368 ~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~s--p~g- 1444 (1553)
++||..++.|...+.. |...|.++.+- |.+
T Consensus 232 ~~~D~ds~~~~~~~~A-----------------------------------------------H~~RVK~i~~~~~~~~~ 264 (362)
T KOG0294|consen 232 SLKDTDSDTPLTEFLA-----------------------------------------------HENRVKDIASYTNPEHE 264 (362)
T ss_pred EEeccCCCccceeeec-----------------------------------------------chhheeeeEEEecCCce
Confidence 9999988766555543 22345566532 344
Q ss_pred eEEEccCCCeEEEEeCCCC
Q 000410 1445 DLLTGGTDLKIRRWDHCSP 1463 (1553)
Q Consensus 1445 ~llTgg~Dg~IrlWDl~~~ 1463 (1553)
.|+|+|+||.|++||++..
T Consensus 265 ~lvTaSSDG~I~vWd~~~~ 283 (362)
T KOG0294|consen 265 YLVTASSDGFIKVWDIDME 283 (362)
T ss_pred EEEEeccCceEEEEEcccc
Confidence 6779999999999999754
No 496
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.85 E-value=4.7e-20 Score=218.38 Aligned_cols=268 Identities=15% Similarity=0.179 Sum_probs=220.1
Q ss_pred CCCcccC-ccEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecCCc
Q 000410 1122 DSGWRPR-GILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRHSA 1200 (1553)
Q Consensus 1122 ~~~W~p~-G~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~~~ 1200 (1553)
-..|+-. ++++.++... .+.+..|-|.++++++|...|.+.|+|+....- .-+...|.+.|++++..|++.
T Consensus 396 ikiWn~~t~kciRTi~~~--y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~l------~Eti~AHdgaIWsi~~~pD~~ 467 (888)
T KOG0306|consen 396 IKIWNRDTLKCIRTITCG--YILASKFVPGDRYIVLGTKNGELQVFDLASASL------VETIRAHDGAIWSISLSPDNK 467 (888)
T ss_pred EEEEEccCcceeEEeccc--cEEEEEecCCCceEEEeccCCceEEEEeehhhh------hhhhhccccceeeeeecCCCC
Confidence 3469844 8999999755 888999999999999999999999999987652 224457999999999999999
Q ss_pred EEEEEeCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcc
Q 000410 1201 QVVVGACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSN 1280 (1553)
Q Consensus 1201 ~las~s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~ 1280 (1553)
.+++||.|.+|++||........+.-.+.-.....+.. .-...|.|+.++|+ +.+|+++--|++|++|=+.+.+-
T Consensus 468 g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtL--el~ddvL~v~~Spd---gk~LaVsLLdnTVkVyflDtlKF 542 (888)
T KOG0306|consen 468 GFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTL--ELEDDVLCVSVSPD---GKLLAVSLLDNTVKVYFLDTLKF 542 (888)
T ss_pred ceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEE--eccccEEEEEEcCC---CcEEEEEeccCeEEEEEecceee
Confidence 99999999999999987533211211121111111222 23457889999999 88999999999999999998876
Q ss_pred cceeccCCCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEE
Q 000410 1281 TWTLKAIPEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYV 1360 (1553)
Q Consensus 1281 ~~~l~~~~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s 1360 (1553)
--++- +|.=+|.|+.++||++.+++||.|..|++|-+.|+.|-+++-. |+..|.++.| .|.. ..+++
T Consensus 543 flsLY--GHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCHKS~fA-HdDSvm~V~F-~P~~---------~~FFt 609 (888)
T KOG0306|consen 543 FLSLY--GHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCHKSFFA-HDDSVMSVQF-LPKT---------HLFFT 609 (888)
T ss_pred eeeec--ccccceeEEeccCCcCeEEeccCCCceEEeccccchhhhhhhc-ccCceeEEEE-cccc---------eeEEE
Confidence 65664 4999999999999999999999999999999999999999875 7778999988 6643 47899
Q ss_pred EEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEecc
Q 000410 1361 AAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLP 1440 (1553)
Q Consensus 1361 ~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~ 1440 (1553)
+|-|+.|+-||-++.++.+.+.++ ...|+|++.
T Consensus 610 ~gKD~kvKqWDg~kFe~iq~L~~H-----------------------------------------------~~ev~cLav 642 (888)
T KOG0306|consen 610 CGKDGKVKQWDGEKFEEIQKLDGH-----------------------------------------------HSEVWCLAV 642 (888)
T ss_pred ecCcceEEeechhhhhhheeeccc-----------------------------------------------hheeeeeEE
Confidence 999999999999999988887633 336999999
Q ss_pred CCCC-eEEEccCCCeEEEEeCCC
Q 000410 1441 LPGG-DLLTGGTDLKIRRWDHCS 1462 (1553)
Q Consensus 1441 sp~g-~llTgg~Dg~IrlWDl~~ 1462 (1553)
.|+| +++|+|.|..||+|...+
T Consensus 643 ~~~G~~vvs~shD~sIRlwE~td 665 (888)
T KOG0306|consen 643 SPNGSFVVSSSHDKSIRLWERTD 665 (888)
T ss_pred cCCCCeEEeccCCceeEeeeccC
Confidence 9998 788999999999999754
No 497
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.85 E-value=8.6e-20 Score=215.24 Aligned_cols=242 Identities=17% Similarity=0.300 Sum_probs=187.3
Q ss_pred cEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEE-EEEec-CCcEEEEEeC
Q 000410 1130 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALC-TMMLR-HSAQVVVGAC 1207 (1553)
Q Consensus 1130 ~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~-l~f~~-~~~~las~s~ 1207 (1553)
++-+.+.||+..|..+++. ++..+++||.||++|+|+-...+ +.....+.+|.+.|.+ ++|.+ ++-.+++|+.
T Consensus 5 ~ls~~l~gH~~DVr~v~~~-~~~~i~s~sRd~t~~vw~~~~~~----~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~ 79 (745)
T KOG0301|consen 5 KLSHELEGHKSDVRAVAVT-DGVCIISGSRDGTVKVWAKKGKQ----YLETHAFEGPKGFIANSICYAESDKGRLVVGGM 79 (745)
T ss_pred eeEEEeccCccchheeEec-CCeEEeecCCCCceeeeeccCcc----cccceecccCcceeeccceeccccCcceEeecc
Confidence 5678899999999888876 45589999999999999976543 2233456667776766 88886 4446999999
Q ss_pred CCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceeccC
Q 000410 1208 DGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLKAI 1287 (1553)
Q Consensus 1208 DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~~~ 1287 (1553)
|++|.+|...... .+ -...+|..-|.+++...+ + .+++|++|.++++|-. +++...+++
T Consensus 80 D~~i~v~~~~~~~-------------P~-~~LkgH~snVC~ls~~~~---~-~~iSgSWD~TakvW~~--~~l~~~l~g- 138 (745)
T KOG0301|consen 80 DTTIIVFKLSQAE-------------PL-YTLKGHKSNVCSLSIGED---G-TLISGSWDSTAKVWRI--GELVYSLQG- 138 (745)
T ss_pred cceEEEEecCCCC-------------ch-hhhhccccceeeeecCCc---C-ceEecccccceEEecc--hhhhcccCC-
Confidence 9999999886211 11 123356677777765554 2 5999999999999965 456666655
Q ss_pred CCCcceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEcCCeE
Q 000410 1288 PEEGYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAGCNEV 1367 (1553)
Q Consensus 1288 ~h~g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~dg~V 1367 (1553)
|...|++++.-|++ .+++|+.|.+|++|.- ++.++++.. |..-|..+++ -+.. .+++++.||.|
T Consensus 139 -H~asVWAv~~l~e~-~~vTgsaDKtIklWk~--~~~l~tf~g-HtD~VRgL~v-l~~~----------~flScsNDg~I 202 (745)
T KOG0301|consen 139 -HTASVWAVASLPEN-TYVTGSADKTIKLWKG--GTLLKTFSG-HTDCVRGLAV-LDDS----------HFLSCSNDGSI 202 (745)
T ss_pred -cchheeeeeecCCC-cEEeccCcceeeeccC--Cchhhhhcc-chhheeeeEE-ecCC----------CeEeecCCceE
Confidence 99999999999987 8999999999999985 677788876 6667888877 4432 48999999999
Q ss_pred EEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEec-cCCCCeE
Q 000410 1368 SLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL-PLPGGDL 1446 (1553)
Q Consensus 1368 ~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~-~sp~g~l 1446 (1553)
++|++ +|+|+..+.+ |...|+++. ..+++.+
T Consensus 203 r~w~~-~ge~l~~~~g-----------------------------------------------htn~vYsis~~~~~~~I 234 (745)
T KOG0301|consen 203 RLWDL-DGEVLLEMHG-----------------------------------------------HTNFVYSISMALSDGLI 234 (745)
T ss_pred EEEec-cCceeeeeec-----------------------------------------------cceEEEEEEecCCCCeE
Confidence 99999 6888777653 333678888 5567789
Q ss_pred EEccCCCeEEEEeCC
Q 000410 1447 LTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1447 lTgg~Dg~IrlWDl~ 1461 (1553)
+|+|.||++|+|+..
T Consensus 235 vs~gEDrtlriW~~~ 249 (745)
T KOG0301|consen 235 VSTGEDRTLRIWKKD 249 (745)
T ss_pred EEecCCceEEEeecC
Confidence 999999999999976
No 498
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.85 E-value=4.4e-21 Score=208.20 Aligned_cols=156 Identities=21% Similarity=0.186 Sum_probs=120.1
Q ss_pred CCHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEecCCcEEEeecCccccccCCCCCCCCccee
Q 000410 109 NSLRDRLSTP-PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSDFSFF 187 (1553)
Q Consensus 109 gsL~d~l~~~-~~l~~~~~~~i~~Qll~aL~~LH~~gIvHrDIKp~NILv~~~~~vkL~DFG~a~~~~~~~~~~~~~~~~ 187 (1553)
|+|.+++..+ ..+++.+++.|+.||+.||+|||+++ ||+|||++.++.+++ ||+++.....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~---------- 62 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE---------- 62 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc----------
Confidence 6899999864 45999999999999999999999999 999999999999999 9988754211
Q ss_pred eecCCCCccccCcchhcccCCccccccCCCCCCcccHHHHHHHHHHHHcCCCCCCchH-----HHHHHhcCCCCC----C
Q 000410 188 FDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH-----LLAYRRGQYDPS----Q 258 (1553)
Q Consensus 188 ~~~~~gt~~Y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~il~eLltg~~pf~~~~-----~~~~~~~~~~~~----~ 258 (1553)
...|++.|+|||++. +..++.++||||+||++|||++|.+||.... ...+........ .
T Consensus 63 --~~~g~~~y~aPE~~~----------~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (176)
T smart00750 63 --QSRVDPYFMAPEVIQ----------GQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRS 130 (176)
T ss_pred --cCCCcccccChHHhc----------CCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccc
Confidence 124678999999774 3467889999999999999999999986432 112221111110 0
Q ss_pred CCCCCCC-HHHHHHHHHhcccCcCCCCCHHHHHHhhh
Q 000410 259 HLEKIPD-SGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 259 ~~~~~~~-~~l~~LI~~mL~~dP~~Rpsa~elL~~~~ 294 (1553)
....... ..++++|.+||..||++||++.|+++|..
T Consensus 131 ~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~ 167 (176)
T smart00750 131 NLESVSAARSFADFMRVCASRLPQRREAANHYLAHCR 167 (176)
T ss_pred cHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHH
Confidence 1111111 26999999999999999999999999964
No 499
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.85 E-value=3.2e-19 Score=183.70 Aligned_cols=259 Identities=18% Similarity=0.225 Sum_probs=190.9
Q ss_pred cEeeeccccccCeeEEEEcCCCCEEEEEeCCCcEEEEeCCCCccccccccceeeecCCCceEEEEEecC----CcEEEEE
Q 000410 1130 ILVAHLQEHCSAVNEIAISHDHSFFVSASDDSTVKVWDSRKLEKDISFRSRLTYHLEGSRALCTMMLRH----SAQVVVG 1205 (1553)
Q Consensus 1130 ~lv~~l~~H~~~V~~l~~spd~~~laSgS~DGtVkIWD~~~~~~~~~~~~~~~~~~h~~~I~~l~f~~~----~~~las~ 1205 (1553)
.+...-+.|++.|+|.+|||+|++++|||+|.+||+--.+....+.+ -..+.+..|.+.|.+++|..+ +..++++
T Consensus 80 v~~kr~khhkgsiyc~~ws~~geliatgsndk~ik~l~fn~dt~~~~-g~dle~nmhdgtirdl~fld~~~s~~~il~s~ 158 (350)
T KOG0641|consen 80 VLCKRNKHHKGSIYCTAWSPCGELIATGSNDKTIKVLPFNADTCNAT-GHDLEFNMHDGTIRDLAFLDDPESGGAILASA 158 (350)
T ss_pred EEeeeccccCccEEEEEecCccCeEEecCCCceEEEEeccccccccc-CcceeeeecCCceeeeEEecCCCcCceEEEec
Confidence 34555677999999999999999999999999999986654332222 245678889999999999753 4566665
Q ss_pred e-CCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCccccee
Q 000410 1206 A-CDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTL 1284 (1553)
Q Consensus 1206 s-~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l 1284 (1553)
+ .|..|++-|... + . .+..+..+.+.+...-.|+ +.++++|+.|.+|++||+|-..++.++
T Consensus 159 gagdc~iy~tdc~~-----g-----~---~~~a~sghtghilalyswn-----~~m~~sgsqdktirfwdlrv~~~v~~l 220 (350)
T KOG0641|consen 159 GAGDCKIYITDCGR-----G-----Q---GFHALSGHTGHILALYSWN-----GAMFASGSQDKTIRFWDLRVNSCVNTL 220 (350)
T ss_pred CCCcceEEEeecCC-----C-----C---cceeecCCcccEEEEEEec-----CcEEEccCCCceEEEEeeeccceeeec
Confidence 4 445555544432 1 1 1122233445566665665 449999999999999999999999888
Q ss_pred ccCCCC-----cceEEEEEcCCCCEEEEEeCCCcEEEEeCCCCcccceeeccccCCcceEEeecCCCCCccccCCCCEEE
Q 000410 1285 KAIPEE-----GYVSSLVTGPCGNWFVSGSSRGVLTLWDLRFLVPVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIY 1359 (1553)
Q Consensus 1285 ~~~~h~-----g~Itsl~~sp~g~~LvsGs~dG~l~lWDlr~~~~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~ 1359 (1553)
.+..|. ..|.+++++|.|+.|++|-.|....+||+|-+.++..+. +|...|.++.| +|. ..+++
T Consensus 221 ~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~-phsadir~vrf-sp~---------a~yll 289 (350)
T KOG0641|consen 221 DNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFH-PHSADIRCVRF-SPG---------AHYLL 289 (350)
T ss_pred cCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeC-CCccceeEEEe-CCC---------ceEEE
Confidence 765443 469999999999999999999999999999999998875 47778888877 554 35899
Q ss_pred EEEcCCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEec
Q 000410 1360 VAAGCNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLL 1439 (1553)
Q Consensus 1360 s~s~dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~ 1439 (1553)
+++.|..|++-|+. |.....+... .. ..|...+-.+.
T Consensus 290 t~syd~~ikltdlq-gdla~el~~~---------------------------------------vv---~ehkdk~i~~r 326 (350)
T KOG0641|consen 290 TCSYDMKIKLTDLQ-GDLAHELPIM---------------------------------------VV---AEHKDKAIQCR 326 (350)
T ss_pred EecccceEEEeecc-cchhhcCceE---------------------------------------EE---EeccCceEEEE
Confidence 99999999999986 3322111100 00 11222466788
Q ss_pred cCCCC-eEEEccCCCeEEEEeCC
Q 000410 1440 PLPGG-DLLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1440 ~sp~g-~llTgg~Dg~IrlWDl~ 1461 (1553)
|+|.. .+++.+.|+++.+|-+.
T Consensus 327 wh~~d~sfisssadkt~tlwa~~ 349 (350)
T KOG0641|consen 327 WHPQDFSFISSSADKTATLWALN 349 (350)
T ss_pred ecCccceeeeccCcceEEEeccC
Confidence 99987 57799999999999763
No 500
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.84 E-value=9.7e-20 Score=207.05 Aligned_cols=278 Identities=15% Similarity=0.215 Sum_probs=207.8
Q ss_pred eeeccccccCeeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCcccc----ccccceeeecCCCceEEEEEecC-CcEEEEE
Q 000410 1132 VAHLQEHCSAVNEIAISHDHS-FFVSASDDSTVKVWDSRKLEKDI----SFRSRLTYHLEGSRALCTMMLRH-SAQVVVG 1205 (1553)
Q Consensus 1132 v~~l~~H~~~V~~l~~spd~~-~laSgS~DGtVkIWD~~~~~~~~----~~~~~~~~~~h~~~I~~l~f~~~-~~~las~ 1205 (1553)
+.+.-.|.+.|+++.+-|... .+||++..+.|.|||..+-.... .+++.+++.+|...-++++|++. .-.+++|
T Consensus 117 i~~~i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~ 196 (422)
T KOG0264|consen 117 ISQKINHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSG 196 (422)
T ss_pred EEEeccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeec
Confidence 344556999999999999765 78888999999999987643211 45667788888887888999885 4578999
Q ss_pred eCCCcEEEEEeeecccCCCccccccccccceecccCCCcEEEEEEecCCCCcceEEEEEeCCceEEEEeCCCCcccceec
Q 000410 1206 ACDGIIHMFSVDHISRGLGNVEKYSGISDIKKKDTKEGAIVTLVNYNTDNCASHMFMYSTQNCGIHLWDTRSNSNTWTLK 1285 (1553)
Q Consensus 1206 s~DG~I~vwdi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~s~~~l~~~s~dg~I~iwDlrt~~~~~~l~ 1285 (1553)
+.|++|.+||+..... -.+....+.....|...|..++|++.. ..++++++.|+.+.+||+|+++..-...
T Consensus 197 ~~d~~i~lwdi~~~~~-------~~~~~~p~~~~~~h~~~VeDV~~h~~h--~~lF~sv~dd~~L~iwD~R~~~~~~~~~ 267 (422)
T KOG0264|consen 197 SDDHTICLWDINAESK-------EDKVVDPKTIFSGHEDVVEDVAWHPLH--EDLFGSVGDDGKLMIWDTRSNTSKPSHS 267 (422)
T ss_pred cCCCcEEEEecccccc-------CCccccceEEeecCCcceehhhccccc--hhhheeecCCCeEEEEEcCCCCCCCccc
Confidence 9999999999974221 122234455667889999999999985 4599999999999999999642222223
Q ss_pred cCCCCcceEEEEEcCCC-CEEEEEeCCCcEEEEeCCCCc-ccceeeccccCCcceEEeecCCCCCccccCCCCEEEEEEc
Q 000410 1286 AIPEEGYVSSLVTGPCG-NWFVSGSSRGVLTLWDLRFLV-PVNSWQYSQVCPIEKMCLFVPPPNAAVSTTARPLIYVAAG 1363 (1553)
Q Consensus 1286 ~~~h~g~Itsl~~sp~g-~~LvsGs~dG~l~lWDlr~~~-~l~s~~~~~~~~I~~l~~~~p~~~~~~~s~~~~~l~s~s~ 1363 (1553)
...|.+.|+|++|+|.+ ..|++|++|++|.+||+|... ++.++.. |...|.++.| +|... ..+++++.
T Consensus 268 ~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~-H~dev~~V~W-SPh~e--------tvLASSg~ 337 (422)
T KOG0264|consen 268 VKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEG-HEDEVFQVEW-SPHNE--------TVLASSGT 337 (422)
T ss_pred ccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccC-CCcceEEEEe-CCCCC--------ceeEeccc
Confidence 34599999999999955 667899999999999999764 4455544 7778999999 77654 57888889
Q ss_pred CCeEEEEEcCCCcEEEEEecccCCCCCccCCCcccccCCCCCCCCCccccccccccccccccCCCCCCccCcEEeccCCC
Q 000410 1364 CNEVSLWNAENGSCHQVLRTANYDGDTEMSDLPWAFARPSSRSNPKTDLRRNVNQKYRVDELNEPPPRLLGIRSLLPLPG 1443 (1553)
Q Consensus 1364 dg~V~vWDl~tg~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~V~sl~~sp~ 1443 (1553)
|+.+.|||+..-...+. .... .+...+.+-.+.+|...|..+.|+|+
T Consensus 338 D~rl~vWDls~ig~eq~--~eda-------------------------------~dgppEllF~HgGH~~kV~DfsWnp~ 384 (422)
T KOG0264|consen 338 DRRLNVWDLSRIGEEQS--PEDA-------------------------------EDGPPELLFIHGGHTAKVSDFSWNPN 384 (422)
T ss_pred CCcEEEEeccccccccC--hhhh-------------------------------ccCCcceeEEecCcccccccccCCCC
Confidence 99999999974321111 0000 00001122234678889999999998
Q ss_pred C--eEEEccCCCeEEEEeCC
Q 000410 1444 G--DLLTGGTDLKIRRWDHC 1461 (1553)
Q Consensus 1444 g--~llTgg~Dg~IrlWDl~ 1461 (1553)
. .|+|++.|+.+.+|...
T Consensus 385 ePW~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 385 EPWTIASVAEDNILQIWQMA 404 (422)
T ss_pred CCeEEEEecCCceEEEeecc
Confidence 7 56699999999999986
Done!