Query 000410
Match_columns 1553
No_of_seqs 607 out of 4340
Neff 8.0
Searched_HMMs 29240
Date Tue Mar 26 17:44:51 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000410.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_187-191//hhsearch_pdb/000410hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aw0_A HPDK1, 3-phosphoinositi 1.0 1 1 399.6 19.3 250 26-292 33-285 (311)
2 3hyh_A Carbon catabolite-derep 1.0 1 1 393.1 22.2 250 26-294 14-265 (275)
3 4b9d_A Serine/threonine-protei 1.0 1 1 391.9 22.6 252 16-293 18-278 (350)
4 3ubd_A Ribosomal protein S6 ki 1.0 1 1 387.0 16.7 247 26-292 25-282 (304)
5 4fie_A Serine/threonine-protei 1.0 1 1 386.2 24.3 243 26-292 152-401 (423)
6 4fih_A Serine/threonine-protei 1.0 1 1 384.8 23.5 243 26-292 75-324 (346)
7 3v5w_A G-protein coupled recep 1.0 1 1 380.9 23.7 250 26-293 190-451 (689)
8 4b99_A Mitogen-activated prote 1.0 1 1 378.7 27.4 252 26-292 55-345 (398)
9 4g3f_A NF-kappa-beta-inducing 1.0 1 1 376.6 24.0 246 26-294 59-312 (336)
10 3fpq_A Serine/threonine-protei 1.0 1 1 371.8 25.7 243 27-292 28-283 (290)
No 1
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=1.00 E-value=1 Score=399.62 Aligned_cols=250 Identities=19% Similarity=0.226 Sum_probs=207.9
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+.. .......+.+.+|+++++.++||||+++++++++++..|+|
T Consensus 33 dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~--~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH--IIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHH--HHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHH--CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEE
T ss_conf 3689889831648499999999999899999988888--77978999999999999867998989199999738989999
Q ss_pred ECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 03535-99888860999999999999999999999999988985257889968991399299941376321268899999
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~ 182 (1553)
||||. |+|++++...+.+++.+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 111 mEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~----- 185 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE----- 185 (311)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTT-----
T ss_pred EECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCC-----
T ss_conf 964899899999987499999999999999999999999887826878789969858988899876875025778-----
Q ss_pred CCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCC
Q ss_conf 96122204898732368410012688632235799998424799999999998099999833799998268899987899
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEK 262 (1553)
Q Consensus 183 ~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~~~~~~~~~~~~~~~ 262 (1553)
.......+.+||+.|+|||++. +..|+.++||||+||++|||++|.+||...+..............++.
T Consensus 186 ~~~~~~~~~~GTp~YmAPEvl~----------~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~ 255 (311)
T 4aw0_A 186 SKQARANSFVGTAQYVSPELLT----------EKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPE 255 (311)
T ss_dssp TTCCCBCCCCSCGGGCCHHHHH----------HSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT
T ss_pred CCCCCCCCCCCCCCCCCHHHHC----------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCC
T ss_conf 7765436755680307998976----------899996898998999999997498998997999999999719999996
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 999879999998100184889999999985
Q 000410 263 IPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 263 i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
..++.+++||.+||++||++|+|++|++.+
T Consensus 256 ~~s~~~~dli~~lL~~dp~~R~t~~e~~~~ 285 (311)
T 4aw0_A 256 KFFPKARDLVEKLLVLDATKRLGCEEMEGY 285 (311)
T ss_dssp TCCHHHHHHHHHHSCSSGGGSTTSGGGTCH
T ss_pred CCCHHHHHHHHHHCCCCHHHCCCHHHHCCC
T ss_conf 569999999999762897578096797587
No 2
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=1.00 E-value=1 Score=393.06 Aligned_cols=250 Identities=22% Similarity=0.258 Sum_probs=210.4
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+.. .........+.+|.++++.++||||++++++++++...|+|
T Consensus 14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~--~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKV--LAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC--------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred CEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHH--CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEEEEE
T ss_conf 8689999821768199999999999899999983788--67878999999999999877998999299999989989999
Q ss_pred ECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 03535998888609999999999999999999999999889852578899689913992999413763212688999999
Q 000410 104 RQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPSD 183 (1553)
Q Consensus 104 ~e~~~gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~~ 183 (1553)
|||++|+|.+++..++.+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus 92 mEy~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~------- 164 (275)
T 3hyh_A 92 IEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD------- 164 (275)
T ss_dssp EECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC------------
T ss_pred EECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEEECCCCEECCC-------
T ss_conf 9278997899998749999999999999999999999988930666875876887999899945477726678-------
Q ss_pred CCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCCCCC
Q ss_conf 61222048987323684100126886322357999984247999999999980999998337999982688999878999
Q 000410 184 FSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQHLEKI 263 (1553)
Q Consensus 184 ~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~~~~~~~~~~~~~~~i 263 (1553)
.....+..||+.|+|||++.+. ..++.++||||+||++|||++|++||.........+........++..
T Consensus 165 -~~~~~~~~GT~~Y~APE~~~~~---------~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p~~ 234 (275)
T 3hyh_A 165 -GNFLKTSCGSPNYAAPEVISGK---------LYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLPKF 234 (275)
T ss_dssp -----------CTTSCHHHHSSS---------SCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTT
T ss_pred -CCCCCCEEECCCCCCHHHHCCC---------CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCC
T ss_conf -8746770289352774550689---------888983656878999999998879989989999999997499999877
Q ss_pred CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 9987999999810018488999999998520
Q 000410 264 PDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 264 ~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 294 (1553)
.++.+++||.+||+.||++|||++|+++|.|
T Consensus 235 ~s~~~~~li~~~L~~dP~~R~s~~eil~hpw 265 (275)
T 3hyh_A 235 LSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 265 (275)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHHHCHH
T ss_pred CCHHHHHHHHHHCCCCHHHCCCHHHHHCCCC
T ss_conf 9999999999986589668919999971920
No 3
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=391.87 Aligned_cols=252 Identities=21% Similarity=0.273 Sum_probs=209.9
Q ss_pred CCCCCCCCCCCEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf 223469986456999885025709999999889--559999995169974789999999999999961899975488799
Q 000410 16 YYLHDLPSSYNLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFW 93 (1553)
Q Consensus 16 ~y~~~~~~~~~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~ 93 (1553)
.|+..+. +|++.+.||+|+||+||+|++.. ..||+|++.+... . ....+.+.+|+++++.++||||++++++
T Consensus 18 ~~f~sme---~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~--~-~~~~~~~~~E~~il~~l~HpnIV~~~~~ 91 (350)
T 4b9d_A 18 LYFQSME---KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRM--S-SKEREESRREVAVLANMKHPNIVQYRES 91 (350)
T ss_dssp CBCSCCC---CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTS--C-HHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred CCCCCCC---CEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHC--C-HHHHHHHHHHHHHHHHCCCCCCCCEEEE
T ss_conf 6778512---55884797027793999999889998999999865878--9-7999999999999987799898919999
Q ss_pred EEECCEEEEEECCCC-CCHHHHHCCC--CCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCC
Q ss_conf 980887999903535-9988886099--9999999999999999999999988985257889968991399299941376
Q 000410 94 QETDKAAYLLRQYFF-NSLRDRLSTP--PFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFAS 170 (1553)
Q Consensus 94 ~~~~~~~~LV~e~~~-gsL~d~l~~~--~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~ 170 (1553)
++++...|+|||||+ |+|.++|..+ ..+++.+++.|+.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus 92 ~~~~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGl 171 (350)
T 4b9d_A 92 FEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGI 171 (350)
T ss_dssp EEETTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTE
T ss_pred EEECCEEEEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHEEECCCCCEEECCCCC
T ss_conf 99899999999488998399999973899997899999999999999999989915135978997987899989764652
Q ss_pred CCCCCCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH--
Q ss_conf 321268899999961222048987323684100126886322357999984247999999999980999998337999--
Q 000410 171 FKPTYIPYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA-- 248 (1553)
Q Consensus 171 ~k~~~~~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~-- 248 (1553)
++.... ......+..||+.|+|||++. +..|+.++||||+||++|||++|.+||.......
T Consensus 172 a~~~~~-------~~~~~~~~~GT~~YmAPE~l~----------~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~ 234 (350)
T 4b9d_A 172 ARVLNS-------TVELARACIGTPYYLSPEICE----------NKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV 234 (350)
T ss_dssp ESCCCH-------HHHHHHHHHSCCTTCCHHHHT----------TCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred CEEECC-------CCCCCCCCCCCCCCCCHHHHC----------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
T ss_conf 144068-------854101457883603999987----------999895999999999999999787998996999999
Q ss_pred --HHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf --982688999878999998799999981001848899999999852
Q 000410 249 --YRRGQYDPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNY 293 (1553)
Q Consensus 249 --~~~~~~~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~ 293 (1553)
+..+.+. ..+...++.+++||.+||+.||++|||++|+|+|.
T Consensus 235 ~~i~~~~~~---~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp 278 (350)
T 4b9d_A 235 LKIISGSFP---PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKG 278 (350)
T ss_dssp HHHHHTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred HHHHCCCCC---CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCCH
T ss_conf 999808999---99755799999999998558966790899996399
No 4
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=1.00 E-value=1 Score=386.97 Aligned_cols=247 Identities=21% Similarity=0.228 Sum_probs=204.3
Q ss_pred CEEEEEEEECCCCEEEEEEEEC-----CCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEE
Q ss_conf 5699988502570999999988-----95599999951699747899999999999999618999754887999808879
Q 000410 26 NLVLKEVLGGSRFFKSILCKHD-----EGLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAA 100 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~-----~~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~ 100 (1553)
+|++.+.||+|+||+||+|++. +..||+|++.+...... ....+.+|+++++.++||||+++++++++++..
T Consensus 25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~---~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~ 101 (304)
T 3ubd_A 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR---DRVRTKMERDILVEVNHPFIVKLHYAFQTEGKL 101 (304)
T ss_dssp GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEE---ECC------CCCCCCCCTTEECEEEEEEETTEE
T ss_pred CCEEEEEEECCCCEEEEEEEECCCCCCCEEEEEEEEEHHHCCHH---HHHHHHHHHHHHHHCCCCCCCEEEEEEEECCEE
T ss_conf 65898897218883999999855887897999999815776847---899999999999877997999099999989999
Q ss_pred EEEECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCC
Q ss_conf 99903535-99888860999999999999999999999999988985257889968991399299941376321268899
Q 000410 101 YLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYD 179 (1553)
Q Consensus 101 ~LV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~ 179 (1553)
|+|||||+ |+|.+++...+.+++.+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 102 ~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~- 180 (304)
T 3ubd_A 102 YLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE- 180 (304)
T ss_dssp EEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC------
T ss_pred EEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEECCCCCCEECCCCC-
T ss_conf 9999757998889999755999999999999999999999997799588887899578689988762366343326887-
Q ss_pred CCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCC
Q ss_conf 99996122204898732368410012688632235799998424799999999998099999833799998268899987
Q 000410 180 DPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLAYRRGQYDPSQH 259 (1553)
Q Consensus 180 ~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~~~~~~~~~~~~ 259 (1553)
....+..||+.|+|||++. ...|+.++||||+||++|||++|.+||...+..............
T Consensus 181 ------~~~~~~~GT~~YmAPE~~~----------~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~ 244 (304)
T 3ubd_A 181 ------KKAYSFCGTVEYMAPEVVN----------RRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLG 244 (304)
T ss_dssp ------CCCCSCCCCGGGCCHHHHH----------TSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred ------CCCCCCCCCCCCCCHHHHC----------CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC
T ss_conf ------6304544181507999965----------688787776361199999998598998984999999999718999
Q ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCC-----HHHHHHH
Q ss_conf 89999987999999810018488999-----9999985
Q 000410 260 LEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQN 292 (1553)
Q Consensus 260 ~~~i~~~~l~~lI~~mL~~dP~~R~s-----a~e~L~~ 292 (1553)
++...++.+++||.+||+.||++|+| ++|+++|
T Consensus 245 ~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~H 282 (304)
T 3ubd_A 245 MPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRH 282 (304)
T ss_dssp CCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTS
T ss_pred CCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCC
T ss_conf 98768999999999986469878799986789999769
No 5
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=386.24 Aligned_cols=243 Identities=19% Similarity=0.191 Sum_probs=202.7
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
.|++.+.||+|+||+||+|++.. ..||+|++.+..... .+.+.+|+.+|+.++||||+++++++++++.+|||
T Consensus 152 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~-----~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iV 226 (423)
T 4fie_A 152 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-----RELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 226 (423)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSS-----GGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HCEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHHH-----HHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEE
T ss_conf 4386169624818489999999999899999986255468-----99999999999857998987168999989999999
Q ss_pred ECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 03535-99888860999999999999999999999999988985257889968991399299941376321268899999
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~ 182 (1553)
||||. |+|.+++... .+++.+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 227 mEy~~gG~L~~~i~~~-~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~---- 301 (423)
T 4fie_A 227 MEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---- 301 (423)
T ss_dssp EECCTTEEHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC----
T ss_pred EECCCCCCHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEECCCCCEEEECCCCCEECCCCC----
T ss_conf 9698998289887616-98999999999999999999998890446578777898589998980372654777887----
Q ss_pred CCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH----HHHCCCCCCC
Q ss_conf 961222048987323684100126886322357999984247999999999980999998337999----9826889998
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~----~~~~~~~~~~ 258 (1553)
....+.+||+.|+|||++. ...|+.++||||+||++|||++|.+||....... +..+. .+..
T Consensus 302 ---~~~~~~~GTp~YmAPEvl~----------~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~-~~~~ 367 (423)
T 4fie_A 302 ---PRRKSLVGTPYWMAPELIS----------RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-PPRL 367 (423)
T ss_dssp ---CCBCCCEECTTTCCHHHHT----------TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-CCCC
T ss_pred ---CCCCCCCCCCCCCCHHHHC----------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC-CCCC
T ss_conf ---6434666474727999977----------9999968999999999999997879989869999999997279-9887
Q ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 7899999879999998100184889999999985
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
......++.+++||.+||+.||++|+|+.|+|+|
T Consensus 368 ~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~H 401 (423)
T 4fie_A 368 KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 401 (423)
T ss_dssp SCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 6501299999999999867895689099999609
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=384.77 Aligned_cols=243 Identities=19% Similarity=0.192 Sum_probs=202.7
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
.|++.+.||+|+||+||+|++.. ..||+|++.+.... ..+.+.+|+++++.++||||+++++++++++..|||
T Consensus 75 ~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~-----~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iv 149 (346)
T 4fih_A 75 YLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ-----RRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVV 149 (346)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS-----SGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred HCEEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHH-----HHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEE
T ss_conf 538707960272829999999899989999998527656-----899999999999867998999199999989999999
Q ss_pred ECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 03535-99888860999999999999999999999999988985257889968991399299941376321268899999
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDPS 182 (1553)
Q Consensus 104 ~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~~ 182 (1553)
||||+ |+|.+++... .+++.+++.|+.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 150 mEy~~gg~L~~~l~~~-~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---- 224 (346)
T 4fih_A 150 MEFLEGGALTDIVTHT-RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---- 224 (346)
T ss_dssp ECCCTTEEHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS----
T ss_pred EECCCCCCHHHHHHCC-CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEECCCCCEEEECCCCCEECCCCC----
T ss_conf 9698998089998718-98999999999999999999998883556278899788799988990275753667887----
Q ss_pred CCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHH----HHHCCCCCCC
Q ss_conf 961222048987323684100126886322357999984247999999999980999998337999----9826889998
Q 000410 183 DFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHLLA----YRRGQYDPSQ 258 (1553)
Q Consensus 183 ~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~~~----~~~~~~~~~~ 258 (1553)
....+.+||+.|+|||++. ...|+.++||||+||++|||++|.+||....... +.... .+..
T Consensus 225 ---~~~~~~~GTp~YmAPEvl~----------~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~-~~~~ 290 (346)
T 4fih_A 225 ---PRRKSLVGTPYWMAPELIS----------RLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL-PPRL 290 (346)
T ss_dssp ---CCBCCCCSCGGGCCHHHHT----------TCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSS-CCCC
T ss_pred ---CCCCCCCCCCCCCCHHHHC----------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCC-CCCC
T ss_conf ---7534656275827999977----------9999968999999999999997879989859999999997179-9988
Q ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 7899999879999998100184889999999985
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 259 ~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
......++.+++||.+||+.||++|||++|+|+|
T Consensus 291 ~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~H 324 (346)
T 4fih_A 291 KNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKH 324 (346)
T ss_dssp SCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred CCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 7502299999999999867995689099999609
No 7
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=1.00 E-value=1 Score=380.85 Aligned_cols=250 Identities=15% Similarity=0.191 Sum_probs=203.4
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCC-CCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEE
Q ss_conf 56999885025709999999889--55999999516997-4789999999999999961899975488799980887999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDY-IDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYL 102 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~-~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~L 102 (1553)
+|++.+.||+|+||+||+|++.. ..||+|++.+.... ..........+.+..+++.++||||++++++++++..+|+
T Consensus 190 df~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lyl 269 (689)
T 3v5w_A 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSF 269 (689)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEE
T ss_pred HEEEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEECCEEEE
T ss_conf 92888898316483999999999998999999757882525568999999999999964899987179999998998899
Q ss_pred EECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCCCCCC
Q ss_conf 903535-9988886099999999999999999999999998898525788996899139929994137632126889999
Q 000410 103 LRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 103 V~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~~~~~ 181 (1553)
|||||. |+|+++|...+.+++.+++.|+.||+.||+|||++||+||||||+|||++.+|++||+|||+++.....
T Consensus 270 VmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~---- 345 (689)
T 3v5w_A 270 ILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK---- 345 (689)
T ss_dssp EECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC----
T ss_pred EEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEEECCCCEEEECCCC----
T ss_conf 9946899829999986699999999999999999999999788541688668759808998896456556663789----
Q ss_pred CCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCH---HHHHHHHCCCCCCC
Q ss_conf 996122204898732368410012688632235799998424799999999998099999833---79999826889998
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELS---HLLAYRRGQYDPSQ 258 (1553)
Q Consensus 182 ~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~---~~~~~~~~~~~~~~ 258 (1553)
...+.+||+.|+|||++. .+..|+.++||||+||++|||++|.+||... ....+.+.......
T Consensus 346 -----~~~t~~GTp~YmAPEvl~---------~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~ 411 (689)
T 3v5w_A 346 -----KPHASVGTHGYMAPEVLQ---------KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV 411 (689)
T ss_dssp -----CCCSCCSCGGGCCHHHHS---------TTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCC
T ss_pred -----CCCCCCCCCCCCCHHHHH---------CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf -----877765786731889984---------799999599999999999999868799999986779999985057988
Q ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCC-----HHHHHHHH
Q ss_conf 789999987999999810018488999-----99999852
Q 000410 259 HLEKIPDSGIRKMILHMIQLEPELRFS-----AESYLQNY 293 (1553)
Q Consensus 259 ~~~~i~~~~l~~lI~~mL~~dP~~R~s-----a~e~L~~~ 293 (1553)
.++...++.+++||.+||++||.+|++ ++|+++|.
T Consensus 412 ~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~Hp 451 (689)
T 3v5w_A 412 ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESP 451 (689)
T ss_dssp CCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSG
T ss_pred CCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCCHHHHHCCC
T ss_conf 8876699999999999760898687999888999996691
No 8
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=378.74 Aligned_cols=252 Identities=19% Similarity=0.259 Sum_probs=204.4
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE------C
Q ss_conf 56999885025709999999889--559999995169974789999999999999961899975488799980------8
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET------D 97 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~------~ 97 (1553)
+|++.+.||+|+||+||+|++.. ..||||++.+.. ......+.+.+|+++|+.++||||+++++++.+ .
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~---~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~ 131 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAF---DVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEF 131 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTT---SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTC
T ss_pred CEEEEEEEECCCCEEEEEEEECCCCCEEEEEEECCCC---CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCC
T ss_conf 7489889842608499999998999899999987400---3468899999999999866799954176555203554668
Q ss_pred CEEEEEECCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCCCEEEEECCCCCCCCCC
Q ss_conf 87999903535998888609999999999999999999999999889852578899689913992999413763212688
Q 000410 98 KAAYLLRQYFFNSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWNWLYLSDFASFKPTYIP 177 (1553)
Q Consensus 98 ~~~~LV~e~~~gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~~vkL~DFg~~k~~~~~ 177 (1553)
+.+|+|||||+|+|++++..++.+++.+++.|++||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus 132 ~~~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~ 211 (398)
T 4b99_A 132 KSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS 211 (398)
T ss_dssp CCEEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC---
T ss_pred CEEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCEEEECCCC
T ss_conf 87999983799988999986599999999999999999999999886767873713354278887787221434213467
Q ss_pred CCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH----HHHHHCC
Q ss_conf 999999612220489873236841001268863223579999842479999999999809999983379----9998268
Q 000410 178 YDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSHL----LAYRRGQ 253 (1553)
Q Consensus 178 ~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~~----~~~~~~~ 253 (1553)
.. .......+..||++|+|||++.+ ...++.++||||+||++|||++|.+||...+. ..+....
T Consensus 212 ~~---~~~~~~~~~~GT~~Y~APEv~~~---------~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~ 279 (398)
T 4b99_A 212 PA---EHQYFMTEYVATRWYRAPELMLS---------LHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVL 279 (398)
T ss_dssp -------CCCCCSSCCCCTTCCHHHHTT---------CSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHH
T ss_pred CC---CCCCCCCCCEECHHHCCHHHHCC---------CCCCCCHHHEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
T ss_conf 54---56666566255867648787627---------8889972221116899999997889989889899999999703
Q ss_pred CCCCC---------------------------CCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf 89998---------------------------7899999879999998100184889999999985
Q 000410 254 YDPSQ---------------------------HLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 254 ~~~~~---------------------------~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
..+.. ......++.+++||.+||+.||++|+||.|+|+|
T Consensus 280 g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 345 (398)
T 4b99_A 280 GTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALRH 345 (398)
T ss_dssp CCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 899867763310023455553078768878898587999999999999774995579189999659
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=376.63 Aligned_cols=246 Identities=16% Similarity=0.062 Sum_probs=202.6
Q ss_pred CEEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCEEEEE
Q ss_conf 56999885025709999999889--5599999951699747899999999999999618999754887999808879999
Q 000410 26 NLVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQETDKAAYLL 103 (1553)
Q Consensus 26 ~y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~~~~~~LV 103 (1553)
.|++.++||+|+||+||+|++.. ..||+|++.+... ..+|..+++.++||||++++++++++...|+|
T Consensus 59 ~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~----------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~iv 128 (336)
T 4g3f_A 59 WMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF----------RVEELVACAGLSSPRIVPLYGAVREGPWVNIF 128 (336)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC----------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred HEEECCEECCCCCEEEEEEEECCCCCEEEEEEECHHHH----------HHHHHHHHHHCCCCCCCCEEEEEEECCEEEEE
T ss_conf 51768685138780999999889998999999788886----------99999999857998999399999989999999
Q ss_pred ECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCEEEECCC-CEEEEECCCCCCCCCCCCCC
Q ss_conf 03535-99888860999999999999999999999999988985257889968991399-29994137632126889999
Q 000410 104 RQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKGICHGDIKCENVLVTSWN-WLYLSDFASFKPTYIPYDDP 181 (1553)
Q Consensus 104 ~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~gIiH~DIKpeNILi~~~~-~vkL~DFg~~k~~~~~~~~~ 181 (1553)
||||+ |+|.+++..++.+++.+++.|+.|++.||+|||++||+||||||+|||++.++ .+||+|||+++........
T Consensus 129 mEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~- 207 (336)
T 4g3f_A 129 MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG- 207 (336)
T ss_dssp ECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred EECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHEEEECCCCEEEEEECCCCEECCCCCCC-
T ss_conf 9665998699999876999999999999999999999998890426167788799589997999627877685678765-
Q ss_pred CCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHH----HHHHHHCCCCCC
Q ss_conf 9961222048987323684100126886322357999984247999999999980999998337----999982688999
Q 000410 182 SDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFELSH----LLAYRRGQYDPS 257 (1553)
Q Consensus 182 ~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~~~----~~~~~~~~~~~~ 257 (1553)
......++..||+.|+|||++. +..|+.++||||+||++|||++|.+||.... ...+...... .
T Consensus 208 -~~~~~~~~~~GT~~YmAPE~~~----------~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~-~ 275 (336)
T 4g3f_A 208 -KSLLTGDYIPGTETHMAPEVVM----------GKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPP-I 275 (336)
T ss_dssp -------CCCCCCGGGCCHHHHT----------TCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCG-G
T ss_pred -CCEECCCCCCCCCCCCCHHHHC----------CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCC-C
T ss_conf -4022178545580200899988----------999890899999999999999786998998999999999808998-0
Q ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 8789999987999999810018488999999998520
Q 000410 258 QHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQNYA 294 (1553)
Q Consensus 258 ~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~~~ 294 (1553)
..++...++.+++||.+||++||++|||+.|+++++.
T Consensus 276 ~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~ 312 (336)
T 4g3f_A 276 REIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVG 312 (336)
T ss_dssp GGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHH
T ss_conf 0258667999999999976289768959999999999
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=1.00 E-value=1 Score=371.81 Aligned_cols=243 Identities=18% Similarity=0.222 Sum_probs=200.2
Q ss_pred EEEEEEEECCCCEEEEEEEECC--CEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEE----CCEE
Q ss_conf 6999885025709999999889--559999995169974789999999999999961899975488799980----8879
Q 000410 27 LVLKEVLGGSRFFKSILCKHDE--GLVLVKVYFKRGDYIDLREYERRLFHIRETFRSIDHPHVWAFQFWQET----DKAA 100 (1553)
Q Consensus 27 y~~~~~LG~G~f~~V~~a~~~~--~~vavKv~~k~~~~~~~~~~~~~l~~e~~~l~~l~hpnIl~~~~~~~~----~~~~ 100 (1553)
|++.+.||+|+||+||+|.+.. ..||+|++.+... . ....+.+.+|.++++.++||||+++++++++ +...
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~--~-~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~ 104 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL--T-KSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCI 104 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGS--C-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEE
T ss_pred EEEEEEEECCCCCEEEEEEECCCCEEEEEEEECHHHC--C-HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEE
T ss_conf 8950697007385999999889990999999832547--9-899999999999998679989991988996436788689
Q ss_pred EEEECCCC-CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCC--CEECCCCCCCEEEEC-CCCEEEEECCCCCCCCC
Q ss_conf 99903535-998888609999999999999999999999999889--852578899689913-99299941376321268
Q 000410 101 YLLRQYFF-NSLRDRLSTPPFLSLVEKKWLAFQLLLAVKQCHEKG--ICHGDIKCENVLVTS-WNWLYLSDFASFKPTYI 176 (1553)
Q Consensus 101 ~LV~e~~~-gsL~d~l~~~~~l~~~~~~~i~~Qil~aL~~lH~~g--IiH~DIKpeNILi~~-~~~vkL~DFg~~k~~~~ 176 (1553)
|||||||+ |+|.+++...+.+++.+++.|+.||+.||+|||++| |+||||||+|||+++ ++.+||+|||+++...
T Consensus 105 ~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~- 183 (290)
T 3fpq_A 105 VLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKR- 183 (290)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCC-
T ss_pred EEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHEEEECCCCCEEEEECCCCEECC-
T ss_conf 9999487978999999866999999999999999999999997799887164574266588899988997276887679-
Q ss_pred CCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC-HHHHHHHHC-CC
Q ss_conf 8999999612220489873236841001268863223579999842479999999999809999983-379999826-88
Q 000410 177 PYDDPSDFSFFFDTGGKRLCYLAPERFYEHGGEMQVAQDAPLKPSMDIFAVGCVIAELFLEVPFFEL-SHLLAYRRG-QY 254 (1553)
Q Consensus 177 ~~~~~~~~~~~~~t~~~t~~y~APE~~~~~~~~~~~~~~~~~t~~~DIwSlG~vl~eLltg~~~f~~-~~~~~~~~~-~~ 254 (1553)
. ....+..||+.|+|||++. +.|+.++||||+||++|||++|.+||.. .......+. ..
T Consensus 184 -----~---~~~~~~~GTp~YmAPE~~~-----------~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~i~~ 244 (290)
T 3fpq_A 184 -----A---SFAKAVIGTPEFMAPEMYE-----------EKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTS 244 (290)
T ss_dssp -----T---TSBEESCSSCCCCCGGGGG-----------TCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTT
T ss_pred -----C---CCCCCCCCCCCCCCHHHCC-----------CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHC
T ss_conf -----8---7667762480201897807-----------99992788887999999999788999999819999999973
Q ss_pred -CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
Q ss_conf -99987899999879999998100184889999999985
Q 000410 255 -DPSQHLEKIPDSGIRKMILHMIQLEPELRFSAESYLQN 292 (1553)
Q Consensus 255 -~~~~~~~~i~~~~l~~lI~~mL~~dP~~R~sa~e~L~~ 292 (1553)
.....++...++.+++||.+||+.||++|||+.|+|+|
T Consensus 245 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~H 283 (290)
T 3fpq_A 245 GVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNH 283 (290)
T ss_dssp TCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCHHHCCCHHHHHCC
T ss_conf 899877776578999999999763896579199999569
Done!