Query 000411
Match_columns 1553
No_of_seqs 253 out of 277
Neff 4.3
Searched_HMMs 29240
Date Tue Mar 26 18:21:26 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/000411.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_187-191//hhsearch_pdb/000411hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3biy_A Histone acetyltransfera 1.0 1 1 747.3 23.1 295 1149-1470 1-317 (380)
2 1l3e_B P300 protein; protein-p 1.0 1 1 185.9 -1.0 88 694-782 6-100 (101)
3 3t92_A Histone acetyltransfera 1.0 1 1 128.1 5.1 87 697-785 5-95 (121)
4 3p57_P Histone acetyltransfera 1.0 1 1 84.3 6.9 87 697-785 4-94 (112)
5 1l3e_B P300 protein; protein-p 1.0 1 1 82.1 1.6 71 732-802 18-99 (101)
6 3t92_A Histone acetyltransfera 1.0 1 1 72.1 1.3 63 734-796 17-85 (121)
7 3p57_P Histone acetyltransfera 1.0 1 1 54.4 3.8 62 734-795 16-81 (112)
8 3pur_A Lysine-specific demethy 1.0 1 1 50.4 1.6 42 1093-1135 54-95 (528)
9 2fc7_A ZZZ3 protein; structure 1.0 1 1 50.3 2.7 59 1461-1530 14-75 (82)
10 1tot_A CREB-binding protein; z 1.0 1 1 47.2 2.9 36 1466-1507 4-39 (52)
No 1
>3biy_A Histone acetyltransferase P300; P300 HAT, bisubstrate inhibitor, protein-inhibitor complex; HET: 01K; 1.70A {Homo sapiens}
Probab=1.00 E-value=1 Score=747.35 Aligned_cols=295 Identities=44% Similarity=0.797 Sum_probs=254.2
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHC-CCCCCC
Q ss_conf 3466779987014899999999999999999988278778889975479999951311456658899964205-999843
Q 000411 1149 VLGAKDLPRTILSDHIEHRLFRRLKQERQERARIQGKSYDEVPGAEALVIRVVSSVDKKLEVKQRFLEIFQEE-NYPTEF 1227 (1553)
Q Consensus 1149 ~~~AkdLP~T~LS~fiE~rLn~~L~~e~~~~a~~~G~~~devp~a~~l~VRvVss~dK~~~Vk~~f~~~F~e~-~yp~ef 1227 (1553)
.|+|+|||+|+||+|||+|||++|+++ +.++++.|+||||++++|+++|+++|.++|.+. +||++|
T Consensus 1 ~f~a~~Lp~t~LS~~lE~rln~~L~~~-------------~~~~~~~v~IRvvss~~k~~ev~~~~~~~f~~~~~~~~~f 67 (380)
T 3biy_A 1 KFSAKRLPSTRLGTFLENRVNDFLRRQ-------------NHPESGEVTVRVVHASDKTVEVKPGMKARFVDSGEMAESF 67 (380)
T ss_dssp CCCSTTSCCCHHHHHHHHHHHHHHHHH-------------TCTTCCCEEEEEEEEEEEEEECCTTHHHHTTTTTSSCSEE
T ss_pred CCCHHHCCCCHHHHHHHHHHHHHHHHH-------------CCCCCCCEEEEEEEEECCEEECCHHHHHHHCCCCCCCCCC
T ss_conf 988033888737899999999999862-------------5565575579999742230121611787613213577345
Q ss_pred CCCEEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 64047999999868878999999976327889999974299982355444444311123310246889999999999998
Q 000411 1228 PYKSKVVLLFQKIEGVEVCLFGMYVQEFGSECQFPNQRRVYLSYLDSVKYFRPEIKAVTGEALRTFVYHEILIGYLEYCK 1307 (1553)
Q Consensus 1228 pYrsKaI~vFQkIDGVDVlfF~MyVQEYgs~c~~PN~r~VyIsYLDSV~YfrP~~~~~~Ge~lRT~VYhEILisYl~Yak 1307 (1553)
|||+|||+|||+|||||||||+|||||||++||.||+|||||+|||||+||+|+ .+||+||||||||||+|||
T Consensus 68 ~YrsK~I~vFQ~idgvDV~fF~m~vqEy~~~c~~pn~r~vyI~YLDSV~yf~p~-------~~Rt~vY~eill~Yl~y~k 140 (380)
T 3biy_A 68 PYRTKALFAFEEIDGVDLCFFGMHVQEYGSDCPPPNQRRVYISYLDSVHFFRPK-------CLRTAVYHEILIGYLEYVK 140 (380)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEECTTSCTTSTTEEEEEEEEECSCCSSG-------GGHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEEEEECCEEEEEEEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCC-------HHHHHHHHHHHHHHHHHHH
T ss_conf 513679999997589379999999471155678988726999871442235730-------2678999999999999998
Q ss_pred HCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEECCHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 60974789982799999970331699999999915799999999999985290964000143320154543334686524
Q 000411 1308 LRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWYLAMLRKAAKENIVVDLTNLYDHFFVSTGECRAKVTAARL 1387 (1553)
Q Consensus 1308 ~~GF~~aHIWAcPP~kGDDYIF~cHP~~Qk~pk~~rL~~WY~~mL~kak~eGIV~~~~nlyd~~f~~~~e~~~~~~a~~L 1387 (1553)
++||++||||||||.+||||||||||++|+||++++|++||++||++|+++|||.+|+|||++.+.. ...+|++|
T Consensus 141 ~~Gf~~~hiWAcPP~~GDDYIF~~HP~~Qk~p~~~rL~~WY~~mL~kg~~~giv~~~~~~~~~~~~~-----~~~~~~~l 215 (380)
T 3biy_A 141 KLGYTTGHIWACPPSEGDDYIFHCHPPDQKIPKPKRLQEWYKKMLDKAVSERIVHDYKDIFKQATED-----RLTSAKEL 215 (380)
T ss_dssp HHTCCEEEEECCCCCTTCCSSSSSCCTTCCCCCHHHHHHHHHHHHHHHHHTTSCCEEEEHHHHHHHH-----TCCCGGGS
T ss_pred HCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHCCC-----CCCCHHHC
T ss_conf 3797368887069989984588407410678880799999999999898759354056686531455-----55887558
Q ss_pred CCCCCCCCCHHHHHHHHHHHHCCCCCCCCC-----------CCC---CHHHHHHHHHHCC-------CCCCCCCCCHHHH
Q ss_conf 743599974689999999971000011255-----------663---0234379765249-------9889989523199
Q 000411 1388 PYFDGDYWPGAAEDLIYQIRQDEDGKKQNK-----------GIT---KKTITKRALKASG-------QTDLSGNASKDLL 1446 (1553)
Q Consensus 1388 PYFeGd~Wp~~~E~ii~~l~~e~~~~k~~k-----------~~~---kk~~~kr~~k~~g-------~~~~~~~~skd~~ 1446 (1553)
|||||||||++||++|++|++|++++|..+ +.. ||...|++.+..+ .....++.++|
T Consensus 216 PyF~gd~W~~~~e~~i~el~~e~~~rk~~~~~~~~~~~~~~~~~k~~kkk~~kk~~~~k~~~~~~~~k~~~~~~~~~~-- 293 (380)
T 3biy_A 216 PYFEGDFWPNVLEESIKELEQEEEERKREENTSNESTDVTKGDSKNAKKKNNKKTSKNKSSLSRGNKKKPGMPNVSND-- 293 (380)
T ss_dssp CCCTTCHHHHHHHHHHCC--------------------------------------------------------------
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCCCCHH--
T ss_conf 841787567999999999988777643100122222445454046655301444433432022320014688764248--
Q ss_pred HHHHHHHHCCCCCCCEEEEHHHHC
Q ss_conf 999973000478432222210000
Q 000411 1447 LMHKLGETICPMKEDFIMVHLQHA 1470 (1553)
Q Consensus 1447 lm~klg~~i~~~kedf~v~~l~~~ 1470 (1553)
||+||+++|++||||||||+|+..
T Consensus 294 l~~kl~~~~~~~ke~ff~i~L~~~ 317 (380)
T 3biy_A 294 LSQKLYATMEKHKEVFFVIRLIAG 317 (380)
T ss_dssp -CHHHHHHHHHTGGGEEEEESSCG
T ss_pred HHHHHHHHHHHHCCCEEEEEECCC
T ss_conf 999999998730453399995477
No 2
>1l3e_B P300 protein; protein-protein complex, transcription; NMR {Homo sapiens} SCOP: g.53.1.1 PDB: 1p4q_B 1r8u_B 2ka4_A 1l8c_A 1u2n_A 1liq_A
Probab=1.00 E-value=1 Score=185.94 Aligned_cols=88 Identities=33% Similarity=0.721 Sum_probs=81.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHCCCCCCCC------CCCCCCCCHHHHHHHHHCCCCCC-CCCCCCCCCCHHHHHHHHHCC
Q ss_conf 45772567755100234532115248998------88778880669999861012599-999998851138899984046
Q 000411 694 TNGNRDRQFRNQQRWLLFLRHARRCAAPE------GKCQDVNCITVQKLWRHMDNCTS-SQCPYPRCHHSKILIHHHKHC 766 (1553)
Q Consensus 694 ~~~~~e~~~~~qqrwLllL~HA~kC~~p~------g~C~~~~C~~mK~lL~Hm~~C~~-~~C~~p~C~sSR~Ll~H~k~C 766 (1553)
...|++++.++|++ |+||+||++|..++ +.|.+++|.+||+||.||.+|++ ++|+|+||.+||+||+||++|
T Consensus 6 ~~~dp~~~k~iqqq-L~lL~HA~kC~~~e~~~g~~~~C~lp~C~~mK~ll~Hm~~C~~g~~C~~~~C~sSr~ii~H~k~C 84 (101)
T 1l3e_B 6 HTADPEKRKLIQQQ-LVLLLHAHKCQRREQANGEVRQCNLPHCRTMKNVLNHMTHCQSGKSCQVAHCASSRQIISHWKNC 84 (101)
T ss_dssp CCCCGGGHHHHHHH-HHHHHHHHHHHHHHTTTSSCCCCSCHHHHHHHHHHHHHTTCCSCSSSSCHHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHH-HHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHC
T ss_conf 88997999999999-99999998848820268868888997638999999999876388999999888799999999868
Q ss_pred CCCCCCCCHHHHHHHH
Q ss_conf 9999998268889899
Q 000411 767 RDPSCPVCVPVKNYLQ 782 (1553)
Q Consensus 767 ~~~~CpvC~pvR~~i~ 782 (1553)
++.+||||.|||++.+
T Consensus 85 ~~~~CpVC~pvk~~~~ 100 (101)
T 1l3e_B 85 TRHDCPVCLPLKNAGD 100 (101)
T ss_dssp CSSCCTTHHHHHCCSC
T ss_pred CCCCCCCCHHHHHHHH
T ss_conf 9999986788996430
No 3
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A
Probab=1.00 E-value=1 Score=128.14 Aligned_cols=87 Identities=30% Similarity=0.605 Sum_probs=79.2
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC-CCCCCCCCCCHHHHH-HHHHCCCCCCCCC-
Q ss_conf 7256775510023453211524899888778880669999861012599-999998851138899-9840469999998-
Q 000411 697 NRDRQFRNQQRWLLFLRHARRCAAPEGKCQDVNCITVQKLWRHMDNCTS-SQCPYPRCHHSKILI-HHHKHCRDPSCPV- 773 (1553)
Q Consensus 697 ~~e~~~~~qqrwLllL~HA~kC~~p~g~C~~~~C~~mK~lL~Hm~~C~~-~~C~~p~C~sSR~Ll-~H~k~C~~~~Cpv- 773 (1553)
..|.+....++||.+|+||.+|..+ .|..|+|..||.||.|+..|+. +.|.+++|..+++|| .||+.|.+.+|||
T Consensus 5 ~~e~R~~~iq~~l~~L~HA~~C~~~--~C~~p~C~~mK~ll~H~~~C~~r~~~~c~~C~~~~~Ll~~Hak~C~~~~C~VP 82 (121)
T 3t92_A 5 PGDSRRLSIQRAIQSLVHAAQCRNA--NCSLPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALAAYHAKHCQENKCPVP 82 (121)
T ss_dssp --CHHHHHHHHHHHHHHHHHHCCCT--TCCCHHHHHHHHHHHHHHHCSSTTTTTCHHHHHHHHHHHHHHTTCCCTTCCST
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCC--CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 6999999999999999977409378--99970438999999999980689999997449999999999976799999998
Q ss_pred -CHHHHHHHHHHH
Q ss_conf -268889899997
Q 000411 774 -CVPVKNYLQQQK 785 (1553)
Q Consensus 774 -C~pvR~~i~k~~ 785 (1553)
|.++|+.+++..
T Consensus 83 ~C~~iK~~~~~qq 95 (121)
T 3t92_A 83 FCLNIKQKLRQQQ 95 (121)
T ss_dssp THHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
T ss_conf 6588999999999
No 4
>3p57_P Histone acetyltransferase P300; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 3io2_A
Probab=1.00 E-value=1 Score=84.32 Aligned_cols=87 Identities=30% Similarity=0.608 Sum_probs=76.5
Q ss_pred CHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCC-CCCCCCCCCCHHHH-HHHHHCCCCCCCCC-
Q ss_conf 7256775510023453211524899888778880669999861012599-99999885113889-99840469999998-
Q 000411 697 NRDRQFRNQQRWLLFLRHARRCAAPEGKCQDVNCITVQKLWRHMDNCTS-SQCPYPRCHHSKIL-IHHHKHCRDPSCPV- 773 (1553)
Q Consensus 697 ~~e~~~~~qqrwLllL~HA~kC~~p~g~C~~~~C~~mK~lL~Hm~~C~~-~~C~~p~C~sSR~L-l~H~k~C~~~~Cpv- 773 (1553)
-.|.+....+++|.+|.||..|.. ..|..+.|..||.|+.|+..|.. .....++|...-.| ..|++.|.+.+|+|
T Consensus 4 ~~~~r~~~iq~~l~~L~HA~~C~~--~~C~~~~C~~mK~ll~H~~~C~~r~~~gC~~Ck~~~~Ll~~HAk~C~~~~C~VP 81 (112)
T 3p57_P 4 PGDSRRLSIQRCIQSLVHACQCRN--ANCSLPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALCCYHAKHCQENKCPVP 81 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCC--TTCCCTTHHHHHHHHTCTTCC-------CCCHHHHHHHHHHHHTTCCSTTCCST
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCC--CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 677899999999999998841989--999970559999999999885687999982009999999999987398999998
Q ss_pred -CHHHHHHHHHHH
Q ss_conf -268889899997
Q 000411 774 -CVPVKNYLQQQK 785 (1553)
Q Consensus 774 -C~pvR~~i~k~~ 785 (1553)
|..+|+.+++.+
T Consensus 82 ~C~~iK~~~~q~q 94 (112)
T 3p57_P 82 FCLNIKQKLRQQQ 94 (112)
T ss_dssp THHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
T ss_conf 6789999999998
No 5
>1l3e_B P300 protein; protein-protein complex, transcription; NMR {Homo sapiens} SCOP: g.53.1.1 PDB: 1p4q_B 1r8u_B 2ka4_A 1l8c_A 1u2n_A 1liq_A
Probab=1.00 E-value=1 Score=82.08 Aligned_cols=71 Identities=28% Similarity=0.617 Sum_probs=63.9
Q ss_pred HHHHHHHHCCCCCC--------CCCCCCCCCCHHHHHHHHHCCCC-CCCCC--CHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 69999861012599--------99999885113889998404699-99998--268889899997820899999886654
Q 000411 732 TVQKLWRHMDNCTS--------SQCPYPRCHHSKILIHHHKHCRD-PSCPV--CVPVKNYLQQQKERARPKTDSCLPSSV 800 (1553)
Q Consensus 732 ~mK~lL~Hm~~C~~--------~~C~~p~C~sSR~Ll~H~k~C~~-~~Cpv--C~pvR~~i~k~~q~~~~~~~~c~p~~v 800 (1553)
.--.||.|+.+|+. +.|..|+|...+.||.|+..|++ .+|+| |...|.++.|++.|.+..||||.|...
T Consensus 18 qqL~lL~HA~kC~~~e~~~g~~~~C~lp~C~~mK~ll~Hm~~C~~g~~C~~~~C~sSr~ii~H~k~C~~~~CpVC~pvk~ 97 (101)
T 1l3e_B 18 QQLVLLLHAHKCQRREQANGEVRQCNLPHCRTMKNVLNHMTHCQSGKSCQVAHCASSRQIISHWKNCTRHDCPVCLPLKN 97 (101)
T ss_dssp HHHHHHHHHHHHHHHHTTTSSCCCCSCHHHHHHHHHHHHHTTCCSCSSSSCHHHHHHHHHHHHHHHCCSSCCTTHHHHHC
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHH
T ss_conf 99999999988488202688688889976389999999998763889999998887999999998689999986788996
Q ss_pred CC
Q ss_conf 45
Q 000411 801 SE 802 (1553)
Q Consensus 801 ~~ 802 (1553)
..
T Consensus 98 ~~ 99 (101)
T 1l3e_B 98 AG 99 (101)
T ss_dssp CS
T ss_pred HH
T ss_conf 43
No 6
>3t92_A Histone acetyltransferase P300 TAZ2-ccaat/enhance protein epsilon; TAZ2 domain, zinc finger, transcription, 300/CBP, C/EBP PROT transferase; HET: TCE TAM; 1.50A {Homo sapiens} PDB: 2k8f_A 2ka6_A 2kje_A 1f81_A
Probab=1.00 E-value=1 Score=72.10 Aligned_cols=63 Identities=25% Similarity=0.637 Sum_probs=57.2
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC---CCCCCHHHHHHH-HHHHHHCCCCCCC--CC
Q ss_conf 999861012599999998851138899984046999---999826888989-9997820899999--88
Q 000411 734 QKLWRHMDNCTSSQCPYPRCHHSKILIHHHKHCRDP---SCPVCVPVKNYL-QQQKERARPKTDS--CL 796 (1553)
Q Consensus 734 K~lL~Hm~~C~~~~C~~p~C~sSR~Ll~H~k~C~~~---~CpvC~pvR~~i-~k~~q~~~~~~~~--c~ 796 (1553)
-++|.|+..|+.+.|.+|+|...+.||.|+..|+.. .|++|..++.++ .|++.|.+..|+| |.
T Consensus 17 l~~L~HA~~C~~~~C~~p~C~~mK~ll~H~~~C~~r~~~~c~~C~~~~~Ll~~Hak~C~~~~C~VP~C~ 85 (121)
T 3t92_A 17 IQSLVHAAQCRNANCSLPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALAAYHAKHCQENKCPVPFCL 85 (121)
T ss_dssp HHHHHHHHHCCCTTCCCHHHHHHHHHHHHHHHCSSTTTTTCHHHHHHHHHHHHHHTTCCCTTCCSTTHH
T ss_pred HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCH
T ss_conf 999997740937899970438999999999980689999997449999999999976799999998658
No 7
>3p57_P Histone acetyltransferase P300; protein-DNA complex, transcription factor, transcriptional activation, zinc finger; HET: DNA; 2.19A {Homo sapiens} PDB: 3io2_A
Probab=1.00 E-value=1 Score=54.45 Aligned_cols=62 Identities=23% Similarity=0.525 Sum_probs=56.1
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCC---CCCCCCHHHHHHH-HHHHHHCCCCCCCC
Q ss_conf 99986101259999999885113889998404699---9999826888989-99978208999998
Q 000411 734 QKLWRHMDNCTSSQCPYPRCHHSKILIHHHKHCRD---PSCPVCVPVKNYL-QQQKERARPKTDSC 795 (1553)
Q Consensus 734 K~lL~Hm~~C~~~~C~~p~C~sSR~Ll~H~k~C~~---~~CpvC~pvR~~i-~k~~q~~~~~~~~c 795 (1553)
-++|.|+..|....|.++.|...+.++.|+..|.. ..|++|..++.++ -|++.|.+..|+|.
T Consensus 16 l~~L~HA~~C~~~~C~~~~C~~mK~ll~H~~~C~~r~~~gC~~Ck~~~~Ll~~HAk~C~~~~C~VP 81 (112)
T 3p57_P 16 IQSLVHACQCRNANCSLPSCQKMKRVVQHTKGCKRKTNGGCPICKQLIALCCYHAKHCQENKCPVP 81 (112)
T ss_dssp HHHHHHHHHCCCTTCCCTTHHHHHHHHTCTTCC-------CCCHHHHHHHHHHHHTTCCSTTCCST
T ss_pred HHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 999998841989999970559999999999885687999982009999999999987398999998
No 8
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=1.00 E-value=1 Score=50.42 Aligned_cols=42 Identities=24% Similarity=0.715 Sum_probs=32.8
Q ss_pred CCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 8545312233334111101122364589999830089996110
Q 000411 1093 TEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYITE 1135 (1553)
Q Consensus 1093 ~~E~wVqC~~C~rw~HqiCaLfn~~~~~~~~a~FiCp~C~~~~ 1135 (1553)
..+.||+||.|..|+|-.|+=......+ ....|+||.|....
T Consensus 54 ~~~~mI~CD~C~~WfH~~CVgi~~~~a~-~~~~y~Cp~C~~~~ 95 (528)
T 3pur_A 54 NDFQWIGCDSCQTWYHFLCSGLEQFEYY-LYEKFFCPKCVPHT 95 (528)
T ss_dssp STTSEEECTTTCCEEEGGGTTCCGGGTT-TEEECCCTTTHHHH
T ss_pred CCCCEEECCCCCCCCCCCCCCCCHHHHC-CCCEEECCCCCCCC
T ss_conf 6998777899986789728999946841-89719995784777
No 9
>2fc7_A ZZZ3 protein; structure genomics, ZZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.6
Probab=1.00 E-value=1 Score=50.29 Aligned_cols=59 Identities=27% Similarity=0.631 Sum_probs=43.1
Q ss_pred CEEEEHHHHCCCCCCCCEECCCEEEECCCCCCCCC---CCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 22222100002545461102861895134545658---42321315898400011376778753045311333
Q 000411 1461 DFIMVHLQHACNHCCILMVSGSRHVCEQCTKLNKN---FQLCDKCFEAEKKREDRERHPVNSREVHILEELPM 1530 (1553)
Q Consensus 1461 df~v~~l~~~C~~C~~~ivsg~rW~c~~c~~~~~~---f~lC~~C~~~e~~~~~~~~~~~~~~~~h~~~~~~v 1530 (1553)
+-.++|..+.|..|....+.|.||.|.+| .+ |+||+.||..... ...| +-.|.+.++..
T Consensus 14 ~~~~~H~~~~Cd~C~~~pI~G~RykC~~C----~d~~~yDLC~~C~~~g~~---~~~H----~~~H~~~~i~~ 75 (82)
T 2fc7_A 14 SGFVQHVGFKCDNCGIEPIQGVRWHCQDC----PPEMSLDFCDSCSDCLHE---TDIH----KEDHQLEPIYR 75 (82)
T ss_dssp TTSCEESSCCCSSSCCSSEESCEEEESSS----CSSSCCEEEGGGTTCCCC---CSSC----CSSSCEEEECS
T ss_pred CCCCEECCCCCCCCCCCCCEECEEECCCC----CCCCCEECHHHHHHCCCC---CCCC----CCCCCEEEEEC
T ss_conf 56876586898798787566033789808----798660517888748566---6888----99999888608
No 10
>1tot_A CREB-binding protein; zinc binding, CBP, TAZ2, transferase; NMR {Mus musculus} SCOP: g.44.1.6
Probab=1.00 E-value=1 Score=47.15 Aligned_cols=36 Identities=25% Similarity=0.803 Sum_probs=31.9
Q ss_pred HHHHCCCCCCCCEECCCEEEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf 100002545461102861895134545658423213158984
Q 000411 1466 HLQHACNHCCILMVSGSRHVCEQCTKLNKNFQLCDKCFEAEK 1507 (1553)
Q Consensus 1466 ~l~~~C~~C~~~ivsg~rW~c~~c~~~~~~f~lC~~C~~~e~ 1507 (1553)
++.+.|..|...| |.||.|.+| .+|+||..||....
T Consensus 4 ~~~~~Cd~C~~~i--g~R~~C~~C----~dyDLC~~C~~~~~ 39 (52)
T 1tot_A 4 RFVYTCNECKHHV--ETRWHCTVC----EDYDLCINCYNTKS 39 (52)
T ss_dssp SSCEEETTTTEEE--SSEEEESSS----SSCEECHHHHHHHC
T ss_pred CCEEECCCCCCCC--CCEEECCCC----CCCHHHHHHHHCCC
T ss_conf 3788998988988--454784899----98534999983799
Done!