BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 000423
(1527 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|M Chain M, 3-D Structure Of Myosin-V Inhibited State
Length = 1080
Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/1094 (39%), Positives = 608/1094 (55%), Gaps = 77/1094 (7%)
Query: 1 MAAPVNIIVGSHVWVEHPELAWVDGEV---FKISAEEVHVHTTNGQTVITNISKVFPKDT 57
MAA + VW+ PE W E+ +K + + + G+ + + PK
Sbjct: 1 MAASELYTKYARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLD---PKTK 57
Query: 58 EAPP-------GGVDDMTKLSYLHEPGVLHNLAARY-ELNEIYTYTGNILIAINPFQRLP 109
E PP G +D+T LSYLHEP VLHNL R+ + IYTY G +L+AINP+++LP
Sbjct: 58 ELPPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP 117
Query: 110 HLYDTHMMEQYKGAQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKML 169
+Y ++ Y G G++ PH+FA+A+ AY+ M + ++ SI+VSGESGAGKT + K
Sbjct: 118 -IYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYA 176
Query: 170 MRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRI 229
MRY A + G S E VE++VL SNP++E+ GNAKT RN+NSSRFGK++E+ FDK RI
Sbjct: 177 MRYFATVSG-SASEA-NVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRI 234
Query: 230 SGAAVRTYLLERSRVCQISDPERNYHCFYLLCA--APPEVREKFKLGDPKSFHYLNQSNC 287
GA +RTYLLE+SRV ++ ERNYH FY LCA A PE + +LG+ FHY Q
Sbjct: 235 IGANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEFK-TLRLGNANYFHYTKQGGS 293
Query: 288 YALDGVDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKD 347
+DG+DD +E + TR+A ++GIS+ Q IFR++A ILHLGN+EFA ++DS I
Sbjct: 294 PVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFA-SRDSDSCAIPP 352
Query: 348 EKSRFHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSR 407
+ L +L+ D + + L +R + T E + + + A+ +RDALAK +Y+
Sbjct: 353 KHD--PLTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYAN 410
Query: 408 LFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVF 467
LF+W+VD +N ++ + IGVLDIYGFE+F++NSFEQFCIN+ NEKLQQ FN HVF
Sbjct: 411 LFNWIVDHVNKALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVF 470
Query: 468 KMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQ 527
K+EQEEY KE+I W+ I+F DNQ ++LIE K G++ LLDE C PK + +T+AQKLY
Sbjct: 471 KLEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYN 529
Query: 528 T-FKSNKRFIKPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASK----- 581
T F KP+LS +F I H+A +V Y + FL+KNKD V E +L +SK
Sbjct: 530 THLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLL 589
Query: 582 --------------CPFVSGXX---------XXXXXXXXXXXXXXXIGSRFKLQLQSLME 618
SG +G +F+ L LME
Sbjct: 590 PELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLME 649
Query: 619 TLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLH 678
TLN+T PHY+RC+KPN+ P F+ +QQLR GVLE IRIS AG+P+R T+ EF
Sbjct: 650 TLNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFS 709
Query: 679 RFGVLA--PDVLDGNYDDKVACEKILDKMGL--KGYQIGKTKVFLRAGQMAELDARRAEV 734
R+ VL DVL D K C+ +L+K+ L YQ GKTK+F RAGQ+A L+ RA+
Sbjct: 710 RYRVLMKQKDVLS---DRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADK 766
Query: 735 LGNAARIIQRQIRTYIARKEFIALRKAAIVLQSYWRGILACKLYEQLRREAAALKIQKNF 794
L A IQ+ IR ++ RK+++ +R+AAI +Q Y RG A LRR AA+ IQK
Sbjct: 767 LRAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQ 826
Query: 795 HSYTARTSYLTARSSAIQLQTGLRAMVARNEFRFRKQTKAAIIIEAYLRRHTACSYYKSL 854
Y R Y R + I LQ LR + RN+++ + +III+ ++R A +Y
Sbjct: 827 RMYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRT 886
Query: 855 KKAAVITQCGWXXXXXXXXXXNLKMAARETGALKEAKDKLEKRVEELTWRL-----QFEK 909
KA V QC + LK+ AR K+ LE ++ +L ++ +++
Sbjct: 887 LKAIVYLQCCYRRMMAKRELKKLKIEARSVERYKKLHIGLENKIMQLQRKIDEQNKEYKS 946
Query: 910 QLR--TNLEEEKAQEIAKLQDALQAMQLQVEE---ANFRILKEQEAARKAIEEAPPIVKE 964
L NLE + E KL+ ++ +++ EE A R+L QE K +E E
Sbjct: 947 LLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTE 1006
Query: 965 TPVIVHDTEK----IESLTAEVDSLKALLLSERQSAEEARKACMDAEVRNTELVKKLEDT 1020
I +K E L +E+ LL +E+ EE + D TE ++K
Sbjct: 1007 KKTIEEWADKYKHETEQLVSELKEQNTLLKTEK---EELNRRIHDQAKEITETMEKKLVE 1063
Query: 1021 EEKVGQLQESMQRL 1034
E K +L + +RL
Sbjct: 1064 ETKQLELDLNDERL 1077
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Alf4
Length = 770
Score = 635 bits (1637), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/678 (47%), Positives = 465/678 (68%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 381
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
Q+ + IGVLDIYGFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 442 CQERKA-YFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 500
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y
Bound With Mgadp-Befx
Length = 770
Score = 633 bits (1633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/678 (47%), Positives = 465/678 (68%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 381
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
Q+ + IGVLDIYGFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 442 CQERKA-YFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 500
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + ++ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed
With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A Gtpase
Domain, Determined As Myosin Fusion
Length = 776
Score = 632 bits (1631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/680 (47%), Positives = 465/680 (68%), Gaps = 15/680 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 156
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 157 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 216
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 217 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 276
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+
Sbjct: 277 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 336
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 337 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 392
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 393 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 452
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
Q+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 453 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 511
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 512 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 571
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 572 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 631
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 632 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 691
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G
Sbjct: 692 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 751
Query: 714 KTKVFLRAGQMAELDARRAE 733
TK+F RAGQ+A ++ R +
Sbjct: 752 ITKIFFRAGQLARIEEAREQ 771
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain
From Dictyostelium Discoideum Fused To The Gtpase Domain
Of Dynamin 1 From Rattus Norvegicus
Length = 776
Score = 632 bits (1630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/680 (47%), Positives = 465/680 (68%), Gaps = 15/680 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 156
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 157 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 216
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 217 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 276
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+
Sbjct: 277 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 336
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 337 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 392
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 393 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 452
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
Q+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 453 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 511
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 512 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 571
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 572 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 631
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 632 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 691
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G
Sbjct: 692 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 751
Query: 714 KTKVFLRAGQMAELDARRAE 733
TK+F RAGQ+A ++ R +
Sbjct: 752 ITKIFFRAGQLARIEEAREQ 771
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With M-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D0Y|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O-Nitrophenyl Aminoethyldiphosphate
Beryllium Fluoride.
pdb|1D0Z|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With P-Nitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1A|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminoethyldiphosphate
Beryllium Trifluoride.
pdb|1D1B|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With O,P-Dinitrophenyl Aminopropyldiphosphate
Beryllium Trifluoride.
pdb|1D1C|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment)
Complexed With N-Methyl-O-Nitrophenyl
Aminoethyldiphosphate Beryllium Trifluoride
Length = 761
Score = 632 bits (1630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/678 (47%), Positives = 464/678 (68%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 381
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
Q+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 442 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 500
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And
Specificity For Myosin Ii
pdb|3BZ7|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ8|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
pdb|3BZ9|A Chain A, Crystal Structures Of (S)-(-)-Blebbistatin Analogs Bound
To Dictyostelium Discoideum Myosin Ii
Length = 762
Score = 632 bits (1630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/678 (47%), Positives = 464/678 (68%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 381
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
Q+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 442 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 500
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 632 bits (1630), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/684 (46%), Positives = 465/684 (67%), Gaps = 15/684 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSS FGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSEFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D +E+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFK 325
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 381
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 442 CSERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKIN 500
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 740
Query: 714 KTKVFLRAGQMAELDARRAEVLGN 737
TK+F RAGQ+A ++ R + LG+
Sbjct: 741 ITKIFFRAGQLARIEEAREQRLGS 764
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Resveratrol
Length = 788
Score = 632 bits (1629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/682 (47%), Positives = 466/682 (68%), Gaps = 15/682 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 156
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 157 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 216
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 217 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 276
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+
Sbjct: 277 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 336
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 337 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 392
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 393 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 452
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
Q+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 453 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 511
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 512 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 571
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 572 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 631
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 632 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 691
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G
Sbjct: 692 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 751
Query: 714 KTKVFLRAGQMAELDARRAEVL 735
TK+F RAGQ+A ++ R + L
Sbjct: 752 ITKIFFRAGQLARIEEAREQRL 773
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of
Dictyostellium Myosin Ii
pdb|1FMW|A Chain A, Crystal Structure Of The Mgatp Complex For The Motor
Domain Of Dictyostelium Myosin Ii
Length = 761
Score = 632 bits (1629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/678 (47%), Positives = 464/678 (68%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 381
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
Q+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 442 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKIN 500
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentabromopseudilin
pdb|2JJ9|A Chain A, Crystal Structure Of Myosin-2 In Complex With Adp-
Metavanadate
pdb|3MJX|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp- Metavanadate And Blebbistatin
Length = 788
Score = 632 bits (1629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/682 (47%), Positives = 466/682 (68%), Gaps = 15/682 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 98 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 156
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 157 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 216
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 217 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 276
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+
Sbjct: 277 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 336
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 337 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 392
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 393 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 452
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
Q+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 453 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 511
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 512 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 571
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 572 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 631
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 632 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 691
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G
Sbjct: 692 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 751
Query: 714 KTKVFLRAGQMAELDARRAEVL 735
TK+F RAGQ+A ++ R + L
Sbjct: 752 ITKIFFRAGQLARIEEAREQRL 773
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated
Inhibition Of Myosin Motor Activity
pdb|4AE3|A Chain A, Crystal Structure Of Ammosamide 272:myosin-2 Motor Domain
Complex
Length = 776
Score = 632 bits (1629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/682 (47%), Positives = 466/682 (68%), Gaps = 15/682 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 144
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+
Sbjct: 265 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 324
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 325 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 380
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 381 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 440
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
Q+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 441 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 499
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 500 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 559
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 560 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 619
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 620 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 679
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G
Sbjct: 680 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 739
Query: 714 KTKVFLRAGQMAELDARRAEVL 735
TK+F RAGQ+A ++ R + L
Sbjct: 740 ITKIFFRAGQLARIEEAREQRL 761
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e
Bound With Mgadp-Alf4
Length = 770
Score = 631 bits (1628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/678 (47%), Positives = 464/678 (68%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 381
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
Q+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 442 CQERKA-YFIGVLDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 500
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYK|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
pdb|3MYL|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The
Gamma- Phosphate Binding Pocket Of Myosin: Structural
And Functional Studies Of Ser236
Length = 762
Score = 631 bits (1627), Expect = e-180, Method: Compositional matrix adjust.
Identities = 319/678 (47%), Positives = 464/678 (68%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNN+SRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNASRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 381
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
Q+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 442 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 500
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 630 bits (1626), Expect = e-180, Method: Compositional matrix adjust.
Identities = 319/678 (47%), Positives = 464/678 (68%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 381
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
Q+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 442 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 500
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + ++ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
pdb|2Y8I|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 630 bits (1624), Expect = e-180, Method: Compositional matrix adjust.
Identities = 319/678 (47%), Positives = 463/678 (68%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 144
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+
Sbjct: 265 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 324
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 325 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 380
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 381 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 440
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
Q+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 441 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 499
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 500 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 559
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 560 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 619
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC
Sbjct: 620 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNA 679
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G
Sbjct: 680 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 739
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 740 ITKIFFRAGQLARIEEAR 757
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin
Function By Mutants G680a And G680v Of Dictyostelium
Myosin-2
Length = 758
Score = 629 bits (1621), Expect = e-180, Method: Compositional matrix adjust.
Identities = 319/678 (47%), Positives = 463/678 (68%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 144
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+
Sbjct: 265 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 324
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 325 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 380
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 381 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 440
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
Q+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 441 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 499
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 500 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 559
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 560 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 619
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC
Sbjct: 620 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNV 679
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G
Sbjct: 680 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 739
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 740 ITKIFFRAGQLARIEEAR 757
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With
Bound Mgadp-Befx
Length = 770
Score = 628 bits (1620), Expect = e-180, Method: Compositional matrix adjust.
Identities = 318/678 (46%), Positives = 464/678 (68%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 325
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 381
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
++ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 442 CEERKA-YFIGVLDIEGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 500
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + ++ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With
Tribromodichloropseudilin
Length = 776
Score = 628 bits (1619), Expect = e-180, Method: Compositional matrix adjust.
Identities = 320/682 (46%), Positives = 465/682 (68%), Gaps = 15/682 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ +P +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKIIP-IYTQEMVDIFKG 144
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+
Sbjct: 265 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 324
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 325 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 380
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 381 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVL 440
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
Q+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 441 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 499
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 500 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 559
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 560 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 619
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 620 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 679
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G
Sbjct: 680 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 739
Query: 714 KTKVFLRAGQMAELDARRAEVL 735
TK+F RAGQ+A ++ R + L
Sbjct: 740 ITKIFFRAGQLARIEEAREQRL 761
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Bef3
pdb|1MND|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mgadp-Alf4
pdb|1MNE|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum
Complexed With Mg-Pyrophosphate
pdb|1VOM|A Chain A, Complex Between Dictyostelium Myosin And Mgadp And
Vanadate At 1.9a Resolution
Length = 762
Score = 627 bits (1617), Expect = e-179, Method: Compositional matrix adjust.
Identities = 318/678 (46%), Positives = 462/678 (68%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D +E+
Sbjct: 266 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFK 325
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 381
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 442 CSE-RAAYFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKIN 500
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ +LAP+V D + A + +L + + + Y+ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYLLAPNVPRDAEDSQKATDAVLKHLNIDPEQYRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 624 bits (1610), Expect = e-178, Method: Compositional matrix adjust.
Identities = 318/678 (46%), Positives = 460/678 (67%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D EE+
Sbjct: 266 SRVVFQSTTERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEEEFK 325
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 381
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 442 CSERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKIN 500
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 621 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ LAP+V D + A + +L + + + ++ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp
Complexes Of The Dictyostelium Discoideum Myosin Motor
Domain
Length = 762
Score = 624 bits (1609), Expect = e-178, Method: Compositional matrix adjust.
Identities = 317/678 (46%), Positives = 461/678 (67%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D +E+
Sbjct: 266 SRVVFQSTTERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFK 325
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 381
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 442 CSERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEEYLKEKIN 500
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSG--XXXXXXXX 595
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 596 XXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
+ +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 621 AKKGANFLTVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLEAIRI+ G+P R + +F+ R+ LAP+V D + A + +L + + + ++ G
Sbjct: 681 VLEAIRITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|A Chain A, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 795
Score = 623 bits (1606), Expect = e-178, Method: Compositional matrix adjust.
Identities = 343/797 (43%), Positives = 478/797 (59%), Gaps = 60/797 (7%)
Query: 11 SHVWVEHPELAWVDGEV---FKISAEEVHVHTTNGQTVITNISKVFPKDTEAPP------ 61
+ VW+ PE W E+ +K + + + G+ + + PK E PP
Sbjct: 11 ARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLD---PKTKELPPLRNPDI 67
Query: 62 -GGVDDMTKLSYLHEPGVLHNLAARY-ELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQ 119
G +D+T LSYLHEP VLHNL R+ + IYTY G +L+AINP+++LP +Y ++
Sbjct: 68 LVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IYGEDIINA 126
Query: 120 YKGAQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGR 179
Y G G++ PH+FA+A+ AY+ M + ++ SI+VSGESGAGKT + K MRY A + G
Sbjct: 127 YSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSG- 185
Query: 180 SGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLL 239
S E VE++VL SNP++E+ GNAKT RN+NSSRFGK++E+ FDK RI GA +RTYLL
Sbjct: 186 SASEA-NVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLL 244
Query: 240 ERSRVCQISDPERNYHCFYLLCA--APPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTE 297
E+SRV ++ ERNYH FY LCA A PE + +LG+ FHY Q +DG+DD +
Sbjct: 245 EKSRVVFQAEEERNYHIFYQLCASAALPEFK-TLRLGNANYFHYTKQGGSPVIDGIDDAK 303
Query: 298 EYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTT 357
E + TR+A ++GIS+ Q IFR++A ILHLGN+EFA ++DS I + L
Sbjct: 304 EMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFA-SRDSDSCAIPPKHDP--LTIF 360
Query: 358 AELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKIN 417
+L+ D + + L +R + T E + + + A+ +RDALAK +Y+ LF+W+VD +N
Sbjct: 361 CDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVN 420
Query: 418 SSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKE 477
++ + IGVLDIYGFE+F++NSFEQFCIN+ NEKLQQ FN HVFK+EQEEY KE
Sbjct: 421 KALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE 480
Query: 478 EINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT-FKSNKRFI 536
+I W+ I+F DNQ ++LIE K G++ LLDE C PK + +T+AQKLY T F
Sbjct: 481 QIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFE 539
Query: 537 KPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASK--------------- 581
KP+LS +F I H+A +V Y + FL+KNKD V E +L +SK
Sbjct: 540 KPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKA 599
Query: 582 -----------CPF--VSGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYI 628
P +G +F+ L LMETLN+T PHY+
Sbjct: 600 ISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYV 659
Query: 629 RCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLA--PD 686
RC+KPN+ P F+ +QQLR GVLE IRIS AG+P+R T+ EF R+ VL D
Sbjct: 660 RCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKD 719
Query: 687 VLDGNYDDKVACEKILDKMGL--KGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQR 744
VL D K C+ +L+K+ L YQ GKTK+F RAGQ+A L+ RA+ L A IQ+
Sbjct: 720 VLS---DRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAACIRIQK 776
Query: 745 QIRTYIARKEFIALRKA 761
IR ++ RK+++ +R+
Sbjct: 777 TIRGWLMRKKYMRMRRG 793
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N-
Methylanthraniloyl) Nucleotide Bound To Dictyostelium
Discoideum Myosin Motor Domain
Length = 762
Score = 620 bits (1600), Expect = e-177, Method: Compositional matrix adjust.
Identities = 315/678 (46%), Positives = 460/678 (67%), Gaps = 15/678 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 87 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 145
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 146 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 205
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 206 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNNAGFISGASIQSYLLEK 265
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D +E+
Sbjct: 266 SRVVFQSTSERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDEDEFK 325
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 326 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 381
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 382 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 441
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQE+Y KE+IN
Sbjct: 442 CSERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKVEQEKYLKEKIN 500
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 501 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 560
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSG--XXXXXXXX 595
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 561 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 620
Query: 596 XXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
+ +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 621 AKKGANFLTVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 680
Query: 656 VLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKMGL--KGYQIG 713
VLE IRI+ G+P R + +F+ R+ LAP+V D + A + +L + + + ++ G
Sbjct: 681 VLEGIRITRKGFPNRIIYADFVKRYYDLAPNVPRDAEDSQKATDAVLKHLNIDPEQFRFG 740
Query: 714 KTKVFLRAGQMAELDARR 731
TK+F RAGQ+A ++ R
Sbjct: 741 ITKIFFRAGQLARIEEAR 758
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|B Chain B, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|C Chain C, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
pdb|1W8J|D Chain D, Crystal Structure Of Myosin V Motor Domain -
Nucleotide-Free
Length = 766
Score = 606 bits (1562), Expect = e-173, Method: Compositional matrix adjust.
Identities = 334/769 (43%), Positives = 461/769 (59%), Gaps = 60/769 (7%)
Query: 11 SHVWVEHPELAWVDGEV---FKISAEEVHVHTTNGQTVITNISKVFPKDTEAPP------ 61
+ VW+ PE W E+ +K + + + G+ + + PK E PP
Sbjct: 11 ARVWIPDPEEVWKSAELLKDYKPGDKVLQLRLEEGKDLEYCLD---PKTKELPPLRNPDI 67
Query: 62 -GGVDDMTKLSYLHEPGVLHNLAARY-ELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQ 119
G +D+T LSYLHEP VLHNL R+ + IYTY G +L+AINP+++LP +Y ++
Sbjct: 68 LVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQLP-IYGEDIINA 126
Query: 120 YKGAQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGR 179
Y G G++ PH+FA+A+ AY+ M + ++ SI+VSGESGAGKT + K MRY A + G
Sbjct: 127 YSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRYFATVSG- 185
Query: 180 SGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLL 239
S E VE++VL SNP++E+ GNAKT RN+NSSRFGK++E+ FDK RI GA +RTYLL
Sbjct: 186 SASEA-NVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRIIGANMRTYLL 244
Query: 240 ERSRVCQISDPERNYHCFYLLCA--APPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTE 297
E+SRV ++ ERNYH FY LCA A PE + +LG+ FHY Q +DG+DD +
Sbjct: 245 EKSRVVFQAEEERNYHIFYQLCASAALPEFK-TLRLGNANYFHYTKQGGSPVIDGIDDAK 303
Query: 298 EYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTT 357
E + TR+A ++GIS+ Q IFR++A ILHLGN+EFA ++DS I + L
Sbjct: 304 EMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFA-SRDSDSCAIPPKHDP--LTIF 360
Query: 358 AELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKIN 417
+L+ D + + L +R + T E + + + A+ +RDALAK +Y+ LF+W+VD +N
Sbjct: 361 CDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFNWIVDHVN 420
Query: 418 SSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKE 477
++ + IGVLDIYGFE+F++NSFEQFCIN+ NEKLQQ FN HVFK+EQEEY KE
Sbjct: 421 KALHSTVKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFKLEQEEYMKE 480
Query: 478 EINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT-FKSNKRFI 536
+I W+ I+F DNQ ++LIE K G++ LLDE C PK + +T+AQKLY T F
Sbjct: 481 QIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNTHLNKCALFE 539
Query: 537 KPKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASK--------------- 581
KP+LS +F I H+A +V Y + FL+KNKD V E +L +SK
Sbjct: 540 KPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLPELFQDEEKA 599
Query: 582 -----------CPF--VSGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYI 628
P +G +F+ L LMETLN+T PHY+
Sbjct: 600 ISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMETLNATTPHYV 659
Query: 629 RCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLA--PD 686
RC+KPN+ P F+ +QQLR GVLE IRIS AG+P+R T+ EF R+ VL D
Sbjct: 660 RCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKD 719
Query: 687 VLDGNYDDKVACEKILDKMGL--KGYQIGKTKVFLRAGQMAELDARRAE 733
VL D K C+ +L+K+ L YQ GKTK+F RAGQ+A L+ RA+
Sbjct: 720 VLS---DRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRAD 765
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum
Motor Domain S456y Mutant In Complex With
Adp-Orthovanadate
Length = 692
Score = 598 bits (1543), Expect = e-171, Method: Compositional matrix adjust.
Identities = 300/613 (48%), Positives = 427/613 (69%), Gaps = 13/613 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+R+P +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKRIP-IYTQEMVDIFKG 144
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+
Sbjct: 265 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 324
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 325 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 380
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 381 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVKKINNVL 440
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
Q+ + IGVLDIYGFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 441 CQERKA-YFIGVLDIYGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 499
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 500 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 559
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 560 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 619
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 620 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 679
Query: 656 VLEAIRISCAGYP 668
VLE IRI+ G+P
Sbjct: 680 VLEGIRITRKGFP 692
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With
Adp-Metavanadate And Pentachlorocarbazole
Length = 695
Score = 592 bits (1527), Expect = e-169, Method: Compositional matrix adjust.
Identities = 299/615 (48%), Positives = 426/615 (69%), Gaps = 13/615 (2%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV+DM++LSYL+EP V HNL RY + IYTY+G L+A+NPF+ +P +Y M++ +KG
Sbjct: 86 GVEDMSELSYLNEPAVFHNLRVRYNQDLIYTYSGLFLVAVNPFKIIP-IYTQEMVDIFKG 144
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
+ E++PH+FAI+DVAYR+M+++ ++ S+L++GESGAGKTE TK +++YLA + GR+
Sbjct: 145 RRRNEVAPHIFAISDVAYRSMLDDRQNQSLLITGESGAGKTENTKKVIQYLASVAGRNQA 204
Query: 183 EGRTV-EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLER 241
G V EQQ+L++NP+LEAFGNAKT RNNNSSRFGKF+E+QF+ G ISGA++++YLLE+
Sbjct: 205 NGSGVLEQQILQANPILEAFGNAKTTRNNNSSRFGKFIEIQFNSAGFISGASIQSYLLEK 264
Query: 242 SRVCQISDPERNYHCFY-LLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYL 300
SRV S+ ERNYH FY LL A E ++ L P+SF+YLNQS C + GV D+EE+
Sbjct: 265 SRVVFQSETERNYHIFYQLLAGATAEEKKALHLAGPESFNYLNQSGCVDIKGVSDSEEFK 324
Query: 301 ATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAEL 360
TR+AMDIVG S+EEQ +IF+++A ILHLGNI+F KG + +V+KD+ + LN + +
Sbjct: 325 ITRQAMDIVGFSQEEQMSIFKIIAGILHLGNIKFEKG-AGEGAVLKDKTA---LNAASTV 380
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ LE AL+ ++ +++ + L+ + SRDAL K +Y RLF WLV KIN+ +
Sbjct: 381 FGVNPSVLEKALMEPRILAGRDLVAQHLNVEKSSSSRDALVKALYGRLFLWLVIKINNVL 440
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
Q+ + IGVLDI GFE FK+NSFEQ CIN+TNEKLQQ FN H+FK+EQEEY KE+IN
Sbjct: 441 CQERKA-YFIGVLDISGFEIFKVNSFEQLCINYTNEKLQQFFNHHMFKLEQEEYLKEKIN 499
Query: 481 WSYIEF-VDNQDVLDLIE-KKPGGIIALLDEACMFPKSTHETFAQKLYQTF-KSNKRFIK 537
W++I+F +D+Q +DLI+ ++P GI+ALLDE +FP +T T KL+ F K N ++ +
Sbjct: 500 WTFIDFGLDSQATIDLIDGRQPPGILALLDEQSVFPNATDNTLITKLHSHFSKKNAKYEE 559
Query: 538 PKLSRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFVSGXXXXXXXXXX 597
P+ S+T F ++HYAG+V Y +L+KNKD + + ++ S V+
Sbjct: 560 PRFSKTEFGVTHYAGQVMYEIQDWLEKNKDPLQQDLELCFKDSSDNVVTKLFNDPNIASR 619
Query: 598 XXXXXXXI--GSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGG 655
I +++K QL SLM TL +T PH++RC+ PNN PA E+ ++ QLRC G
Sbjct: 620 AKKGANFITVAAQYKEQLASLMATLETTNPHFVRCIIPNNKQLPAKLEDKVVLDQLRCNG 679
Query: 656 VLEAIRISCAGYPTR 670
VLE IRI+ G+P R
Sbjct: 680 VLEGIRITRKGFPNR 694
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|A Chain A, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|A Chain A, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|A Chain A, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 839
Score = 537 bits (1383), Expect = e-152, Method: Compositional matrix adjust.
Identities = 318/801 (39%), Positives = 451/801 (56%), Gaps = 56/801 (6%)
Query: 12 HVWVEHPELAWVDGEVFKISAEEVHVHTTNGQTVITNISKVFPKDT---EAPPG--GVDD 66
+ WV P+ +V E+ +EV V T Q ++V KD PP D
Sbjct: 33 NCWVPDPDFGFVGAEIQSTKGDEVTVKTDKTQE-----TRVVKKDDIGQRNPPKFEMNMD 87
Query: 67 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 126
M L++L+E +LHNL +RYE IYTY+G IAINP++RLP +Y ++++Y+G +
Sbjct: 88 MANLTFLNEASILHNLRSRYESGFIYTYSGLFCIAINPYRRLP-IYTQGLVDKYRGKRRA 146
Query: 127 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGR------- 179
E+ PH+F+IAD AY+ M+ + ++ S+L++GESGAGKTE TK +++Y A +
Sbjct: 147 EMPPHLFSIADNAYQYMLQDRENQSMLITGESGAGKTENTKKVIQYFALVAASLAGKKDK 206
Query: 180 ------SGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAA 233
+ T+E Q+++ NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA
Sbjct: 207 KEEEKKKDEKKGTLEDQIVQCNPVLEAYGNAKTTRNNNSSRFGKFIRIHFGTQGKIAGAD 266
Query: 234 VRTYLLERSRVCQISDPERNYHCFY-LLCAAPPEVREK-FKLGDPKSFHYLNQSNCYALD 291
+ TYLLE+SRV ERNYH FY LL A PE EK + DP + ++NQ +D
Sbjct: 267 IETYLLEKSRVTYQQSAERNYHIFYQLLSPAFPENIEKILAVPDPGLYGFINQGTL-TVD 325
Query: 292 GVDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFA-KGEEADS-SVIKDEK 349
G+DD EE T A D++G ++EE+ ++++ ILHLG +++ +GE+A++ + EK
Sbjct: 326 GIDDEEEMGLTDTAFDVLGFTDEEKLSMYKCTGCILHLGEMKWKQRGEQAEADGTAEAEK 385
Query: 350 SRFHLNTTA-ELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRL 408
F L A +LLKC L+ + E +T+ + S ALAK++Y R+
Sbjct: 386 VAFLLGVNAGDLLKC--------LLKPKIKVGTEYVTQGRNKDQVTNSIAALAKSLYDRM 437
Query: 409 FDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFK 468
F+WLV ++N ++ + IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F
Sbjct: 438 FNWLVRRVNQTLDTKAKRQFFIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFV 497
Query: 469 MEQEEYTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQ 527
+EQEEY KE I W +I+F +D Q ++LIE KP GI+++L+E CMFPK++ +F KLY
Sbjct: 498 LEQEEYKKEGIVWEFIDFGLDLQACIELIE-KPMGILSILEEECMFPKASDTSFKNKLYD 556
Query: 528 T-FKSNKRFIKPKLSRTS-----FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASK 581
N F KPK + F + HYAG V+Y +LDKNKD + LL SK
Sbjct: 557 NHLGKNPMFGKPKPPKAGCAEAHFCLHHYAGSVSYSIAGWLDKNKDPINENVVELLQNSK 616
Query: 582 CPFVSGXXX-------XXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPN 634
P V I S K L LM+ L ST PH++RC+ PN
Sbjct: 617 EPIVKMLFTPPRILTPGGKKKKGKSAAFQTISSVHKESLNKLMKNLYSTHPHFVRCIIPN 676
Query: 635 NALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPD-VLDGNYD 693
P + + A ++ QLRC GVLE IRI G+P R + EF R+ +LAP+ V G D
Sbjct: 677 ELKTPGLIDAALVLHQLRCNGVLEGIRICRKGFPNRIIYSEFKQRYSILAPNAVPSGFAD 736
Query: 694 DKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIA 751
KV +K L + L Y++G TKVF +AG + L+ R E L + Q IR Y+
Sbjct: 737 GKVVTDKALSALQLDPNEYRLGNTKVFFKAGVLGMLEDMRDERLSKIISMFQAHIRGYLM 796
Query: 752 RKEFIALRKAAIVLQSYWRGI 772
RK + L+ I L R +
Sbjct: 797 RKAYKKLQDQRIGLTLIQRNV 817
>pdb|2X51|A Chain A, M6 Delta Insert1
Length = 789
Score = 531 bits (1369), Expect = e-151, Method: Compositional matrix adjust.
Identities = 299/761 (39%), Positives = 428/761 (56%), Gaps = 33/761 (4%)
Query: 10 GSHVWVEHPELAWVDGEVFKISAEEVHVHTTN--GQTVITNISKVFPKDTEAPPGGVDDM 67
G VW HP + G + I + + + N G+T + I++VFP + ++ V+D
Sbjct: 4 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKD-VEDN 62
Query: 68 TKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGE 127
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G
Sbjct: 63 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 122
Query: 128 LSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV 187
+ PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ +
Sbjct: 123 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDI 178
Query: 188 EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQI 247
+ +++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 179 DDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 238
Query: 248 SDPERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRRAM 306
ERNYH FY LCA E +RE+ L P +F YLN+ +DD +++ AM
Sbjct: 239 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAM 298
Query: 307 DIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCDAK 366
+G+ +EE+ +FRVVA +LHLGNI+F + KS L AELL D
Sbjct: 299 KKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQD 358
Query: 367 SLEDALINRVMVTPE-----EVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIG 421
L +L RVM+T VI L A +RDALAKTVYS LFD +V+++N
Sbjct: 359 DLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFP 418
Query: 422 QDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINW 481
+ +S IGVLDI GFE F+ NSFEQFCIN+ NEKLQQ FN+ + K EQE Y KE +
Sbjct: 419 FETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGV 477
Query: 482 SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFIKPKLS 541
+ + +VDNQD +DLIE + GI+ +LDE P+ + + F ++Q K + R P+ S
Sbjct: 478 NEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKS 537
Query: 542 RTS----------FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFV------ 585
+ + F I H+AG V Y F++KN D + + L+ S+ F+
Sbjct: 538 KLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFES 597
Query: 586 SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENA 645
S +G++FK QL L++ L ST +IRC+KPN + FE A
Sbjct: 598 STNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGA 657
Query: 646 NIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKM 705
I+ QL+C G++ + + G+P+R +F+E + + PD L D ++ C+ + +
Sbjct: 658 QILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALFKAL 716
Query: 706 GLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQR 744
GL Y+ G TKVF R G+ AE D + A +++R
Sbjct: 717 GLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKR 757
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|2VB6|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 788
Score = 531 bits (1369), Expect = e-151, Method: Compositional matrix adjust.
Identities = 299/761 (39%), Positives = 428/761 (56%), Gaps = 33/761 (4%)
Query: 10 GSHVWVEHPELAWVDGEVFKISAEEVHVHTTN--GQTVITNISKVFPKDTEAPPGGVDDM 67
G VW HP + G + I + + + N G+T + I++VFP + ++ V+D
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKD-VEDN 61
Query: 68 TKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGE 127
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G
Sbjct: 62 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 121
Query: 128 LSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV 187
+ PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ +
Sbjct: 122 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDI 177
Query: 188 EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQI 247
+ +++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 178 DDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 237
Query: 248 SDPERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRRAM 306
ERNYH FY LCA E +RE+ L P +F YLN+ +DD +++ AM
Sbjct: 238 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAM 297
Query: 307 DIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCDAK 366
+G+ +EE+ +FRVVA +LHLGNI+F + KS L AELL D
Sbjct: 298 KKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQD 357
Query: 367 SLEDALINRVMVTPE-----EVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIG 421
L +L RVM+T VI L A +RDALAKTVYS LFD +V+++N
Sbjct: 358 DLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFP 417
Query: 422 QDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINW 481
+ +S IGVLDI GFE F+ NSFEQFCIN+ NEKLQQ FN+ + K EQE Y KE +
Sbjct: 418 FETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGV 476
Query: 482 SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFIKPKLS 541
+ + +VDNQD +DLIE + GI+ +LDE P+ + + F ++Q K + R P+ S
Sbjct: 477 NEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKS 536
Query: 542 RTS----------FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFV------ 585
+ + F I H+AG V Y F++KN D + + L+ S+ F+
Sbjct: 537 KLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFES 596
Query: 586 SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENA 645
S +G++FK QL L++ L ST +IRC+KPN + FE A
Sbjct: 597 STNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGA 656
Query: 646 NIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKM 705
I+ QL+C G++ + + G+P+R +F+E + + PD L D ++ C+ + +
Sbjct: 657 QILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALFKAL 715
Query: 706 GLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQR 744
GL Y+ G TKVF R G+ AE D + A +++R
Sbjct: 716 GLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKR 756
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|B Chain B, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|2W4T|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 831
Score = 531 bits (1368), Expect = e-150, Method: Compositional matrix adjust.
Identities = 312/800 (39%), Positives = 458/800 (57%), Gaps = 56/800 (7%)
Query: 12 HVWVEHPELAWVDGEVFKISAEEVHVHTTNGQTVITNISKVFPKD---TEAPPG--GVDD 66
+ WV + + E+ +E+ V + V + ++ KD + PP ++D
Sbjct: 29 NCWVPDEKEGFASAEIQSSKGDEITV-----KIVADSSTRTVKKDDIQSMNPPKFEKLED 83
Query: 67 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 126
M ++YL+E VL+NL +RY IYTY+G IA+NP++RLP +Y ++ +Y+G +
Sbjct: 84 MANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKT 142
Query: 127 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG--------- 177
E+ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 143 EIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEE 202
Query: 178 GRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTY 237
EG ++E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA + TY
Sbjct: 203 ASDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETY 261
Query: 238 LLERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLGDPKS--FHYLNQSNCYALDGVD 294
LLE+SRV ERNYH FY +C+ A PE+ + L P S + ++NQ C +D +D
Sbjct: 262 LLEKSRVTYQQSAERNYHIFYQICSNAIPELND-VMLVTPDSGLYSFINQG-CLTVDNID 319
Query: 295 DTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEF---AKGEEADS-SVIKDEKS 350
D EE+ A DI+G ++EE+ ++F+ A+ILH+G ++F + E+A+S + EK
Sbjct: 320 DVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKV 379
Query: 351 RFHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFD 410
F L +A L AL+ + E++T+ + V S ALAK++Y R+F+
Sbjct: 380 AF-------LCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFN 432
Query: 411 WLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKME 470
WLV ++N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +E
Sbjct: 433 WLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILE 492
Query: 471 QEEYTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT- 528
QEEY KE I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KLYQ
Sbjct: 493 QEEYKKEGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNH 551
Query: 529 FKSNKRFIKP-KLSRTS-----FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKC 582
N+ F KP K +R + F + HYAG V Y +L+KNKD + LL ASK
Sbjct: 552 MGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKE 611
Query: 583 PFVSGXXXXXXXXXXXXXXXXXIGSRFKL-------QLQSLMETLNSTEPHYIRCVKPNN 635
P V+ S F+ L LM+ L ST PH++RC+ PN
Sbjct: 612 PLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNE 671
Query: 636 ALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVL-DGNYDD 694
+P + + ++ QL+C GVLE IRI G+P+R + EF R+ +LAP+ + G D
Sbjct: 672 LKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDG 731
Query: 695 KVACEKILD--KMGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIAR 752
K EKIL +M Y++G TKVF +AG + L+ R E L + Q IR Y+ R
Sbjct: 732 KTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIR 791
Query: 753 KEFIALRKAAIVLQSYWRGI 772
K + L+ I L R I
Sbjct: 792 KAYKKLQDQRIGLSVIQRNI 811
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State
Length = 830
Score = 531 bits (1368), Expect = e-150, Method: Compositional matrix adjust.
Identities = 312/800 (39%), Positives = 458/800 (57%), Gaps = 56/800 (7%)
Query: 12 HVWVEHPELAWVDGEVFKISAEEVHVHTTNGQTVITNISKVFPKD---TEAPPG--GVDD 66
+ WV + + E+ +E+ V + V + ++ KD + PP ++D
Sbjct: 28 NCWVPDEKEGFASAEIQSSKGDEITV-----KIVADSSTRTVKKDDIQSMNPPKFEKLED 82
Query: 67 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 126
M ++YL+E VL+NL +RY IYTY+G IA+NP++RLP +Y ++ +Y+G +
Sbjct: 83 MANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKT 141
Query: 127 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG--------- 177
E+ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 142 EIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEE 201
Query: 178 GRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTY 237
EG ++E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA + TY
Sbjct: 202 ASDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETY 260
Query: 238 LLERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLGDPKS--FHYLNQSNCYALDGVD 294
LLE+SRV ERNYH FY +C+ A PE+ + L P S + ++NQ C +D +D
Sbjct: 261 LLEKSRVTYQQSAERNYHIFYQICSNAIPELND-VMLVTPDSGLYSFINQG-CLTVDNID 318
Query: 295 DTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEF---AKGEEADS-SVIKDEKS 350
D EE+ A DI+G ++EE+ ++F+ A+ILH+G ++F + E+A+S + EK
Sbjct: 319 DVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKV 378
Query: 351 RFHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFD 410
F L +A L AL+ + E++T+ + V S ALAK++Y R+F+
Sbjct: 379 AF-------LCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFN 431
Query: 411 WLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKME 470
WLV ++N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +E
Sbjct: 432 WLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILE 491
Query: 471 QEEYTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT- 528
QEEY KE I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KLYQ
Sbjct: 492 QEEYKKEGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNH 550
Query: 529 FKSNKRFIKP-KLSRTS-----FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKC 582
N+ F KP K +R + F + HYAG V Y +L+KNKD + LL ASK
Sbjct: 551 MGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKE 610
Query: 583 PFVSGXXXXXXXXXXXXXXXXXIGSRFKL-------QLQSLMETLNSTEPHYIRCVKPNN 635
P V+ S F+ L LM+ L ST PH++RC+ PN
Sbjct: 611 PLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNE 670
Query: 636 ALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVL-DGNYDD 694
+P + + ++ QL+C GVLE IRI G+P+R + EF R+ +LAP+ + G D
Sbjct: 671 LKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDG 730
Query: 695 KVACEKILD--KMGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIAR 752
K EKIL +M Y++G TKVF +AG + L+ R E L + Q IR Y+ R
Sbjct: 731 KTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIR 790
Query: 753 KEFIALRKAAIVLQSYWRGI 772
K + L+ I L R I
Sbjct: 791 KAYKKLQDQRIGLSVIQRNI 810
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|A Chain A, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|A Chain A, Structure Of Nucleotide-free Scallop Myosin S1
Length = 840
Score = 531 bits (1367), Expect = e-150, Method: Compositional matrix adjust.
Identities = 312/800 (39%), Positives = 458/800 (57%), Gaps = 56/800 (7%)
Query: 12 HVWVEHPELAWVDGEVFKISAEEVHVHTTNGQTVITNISKVFPKD---TEAPPG--GVDD 66
+ WV + + E+ +E+ V + V + ++ KD + PP ++D
Sbjct: 33 NCWVPDEKEGFASAEIQSSKGDEITV-----KIVADSSTRTVKKDDIQSMNPPKFEKLED 87
Query: 67 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 126
M ++YL+E VL+NL +RY IYTY+G IA+NP++RLP +Y ++ +Y+G +
Sbjct: 88 MANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKT 146
Query: 127 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG--------- 177
E+ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 147 EIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEE 206
Query: 178 GRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTY 237
EG ++E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA + TY
Sbjct: 207 ASDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETY 265
Query: 238 LLERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLGDPKS--FHYLNQSNCYALDGVD 294
LLE+SRV ERNYH FY +C+ A PE+ + L P S + ++NQ C +D +D
Sbjct: 266 LLEKSRVTYQQSAERNYHIFYQICSNAIPELND-VMLVTPDSGLYSFINQG-CLTVDNID 323
Query: 295 DTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEF---AKGEEADS-SVIKDEKS 350
D EE+ A DI+G ++EE+ ++F+ A+ILH+G ++F + E+A+S + EK
Sbjct: 324 DVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKV 383
Query: 351 RFHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFD 410
F L +A L AL+ + E++T+ + V S ALAK++Y R+F+
Sbjct: 384 AF-------LCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFN 436
Query: 411 WLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKME 470
WLV ++N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +E
Sbjct: 437 WLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILE 496
Query: 471 QEEYTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT- 528
QEEY KE I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KLYQ
Sbjct: 497 QEEYKKEGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNH 555
Query: 529 FKSNKRFIKP-KLSRTS-----FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKC 582
N+ F KP K +R + F + HYAG V Y +L+KNKD + LL ASK
Sbjct: 556 MGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKE 615
Query: 583 PFVSGXXXXXXXXXXXXXXXXXIGSRFKL-------QLQSLMETLNSTEPHYIRCVKPNN 635
P V+ S F+ L LM+ L ST PH++RC+ PN
Sbjct: 616 PLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNE 675
Query: 636 ALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVL-DGNYDD 694
+P + + ++ QL+C GVLE IRI G+P+R + EF R+ +LAP+ + G D
Sbjct: 676 LKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDG 735
Query: 695 KVACEKILD--KMGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIAR 752
K EKIL +M Y++G TKVF +AG + L+ R E L + Q IR Y+ R
Sbjct: 736 KTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIR 795
Query: 753 KEFIALRKAAIVLQSYWRGI 772
K + L+ I L R I
Sbjct: 796 KAYKKLQDQRIGLSVIQRNI 815
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation
pdb|1KK8|A Chain A, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 837
Score = 531 bits (1367), Expect = e-150, Method: Compositional matrix adjust.
Identities = 312/800 (39%), Positives = 458/800 (57%), Gaps = 56/800 (7%)
Query: 12 HVWVEHPELAWVDGEVFKISAEEVHVHTTNGQTVITNISKVFPKD---TEAPPG--GVDD 66
+ WV + + E+ +E+ V + V + ++ KD + PP ++D
Sbjct: 33 NCWVPDEKEGFASAEIQSSKGDEITV-----KIVADSSTRTVKKDDIQSMNPPKFEKLED 87
Query: 67 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 126
M ++YL+E VL+NL +RY IYTY+G IA+NP++RLP +Y ++ +Y+G +
Sbjct: 88 MANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKT 146
Query: 127 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG--------- 177
E+ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 147 EIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEE 206
Query: 178 GRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTY 237
EG ++E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA + TY
Sbjct: 207 ASDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETY 265
Query: 238 LLERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLGDPKS--FHYLNQSNCYALDGVD 294
LLE+SRV ERNYH FY +C+ A PE+ + L P S + ++NQ C +D +D
Sbjct: 266 LLEKSRVTYQQSAERNYHIFYQICSNAIPELND-VMLVTPDSGLYSFINQG-CLTVDNID 323
Query: 295 DTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEF---AKGEEADS-SVIKDEKS 350
D EE+ A DI+G ++EE+ ++F+ A+ILH+G ++F + E+A+S + EK
Sbjct: 324 DVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKV 383
Query: 351 RFHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFD 410
F L +A L AL+ + E++T+ + V S ALAK++Y R+F+
Sbjct: 384 AF-------LCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFN 436
Query: 411 WLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKME 470
WLV ++N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +E
Sbjct: 437 WLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILE 496
Query: 471 QEEYTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT- 528
QEEY KE I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KLYQ
Sbjct: 497 QEEYKKEGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNH 555
Query: 529 FKSNKRFIKP-KLSRTS-----FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKC 582
N+ F KP K +R + F + HYAG V Y +L+KNKD + LL ASK
Sbjct: 556 MGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKE 615
Query: 583 PFVSGXXXXXXXXXXXXXXXXXIGSRFKL-------QLQSLMETLNSTEPHYIRCVKPNN 635
P V+ S F+ L LM+ L ST PH++RC+ PN
Sbjct: 616 PLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNE 675
Query: 636 ALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVL-DGNYDD 694
+P + + ++ QL+C GVLE IRI G+P+R + EF R+ +LAP+ + G D
Sbjct: 676 LKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDG 735
Query: 695 KVACEKILD--KMGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIAR 752
K EKIL +M Y++G TKVF +AG + L+ R E L + Q IR Y+ R
Sbjct: 736 KTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIR 795
Query: 753 KEFIALRKAAIVLQSYWRGI 772
K + L+ I L R I
Sbjct: 796 KAYKKLQDQRIGLSVIQRNI 815
>pdb|1B7T|A Chain A, Myosin Digested By Papain
pdb|1L2O|A Chain A, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|A Chain A, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|A Chain A, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
Length = 835
Score = 530 bits (1366), Expect = e-150, Method: Compositional matrix adjust.
Identities = 312/800 (39%), Positives = 458/800 (57%), Gaps = 56/800 (7%)
Query: 12 HVWVEHPELAWVDGEVFKISAEEVHVHTTNGQTVITNISKVFPKD---TEAPPG--GVDD 66
+ WV + + E+ +E+ V + V + ++ KD + PP ++D
Sbjct: 33 NCWVPDEKEGFASAEIQSSKGDEITV-----KIVADSSTRTVKKDDIQSMNPPKFEKLED 87
Query: 67 MTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFG 126
M ++YL+E VL+NL +RY IYTY+G IA+NP++RLP +Y ++ +Y+G +
Sbjct: 88 MANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKT 146
Query: 127 ELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG--------- 177
E+ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA +
Sbjct: 147 EIPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEE 206
Query: 178 GRSGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTY 237
EG ++E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA + TY
Sbjct: 207 ASDKKEG-SLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETY 265
Query: 238 LLERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLGDPKS--FHYLNQSNCYALDGVD 294
LLE+SRV ERNYH FY +C+ A PE+ + L P S + ++NQ C +D +D
Sbjct: 266 LLEKSRVTYQQSAERNYHIFYQICSNAIPELND-VMLVTPDSGLYSFINQG-CLTVDNID 323
Query: 295 DTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEF---AKGEEADS-SVIKDEKS 350
D EE+ A DI+G ++EE+ ++F+ A+ILH+G ++F + E+A+S + EK
Sbjct: 324 DVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKV 383
Query: 351 RFHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFD 410
F L +A L AL+ + E++T+ + V S ALAK++Y R+F+
Sbjct: 384 AF-------LCGINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFN 436
Query: 411 WLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKME 470
WLV ++N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +E
Sbjct: 437 WLVRRVNKTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFILE 496
Query: 471 QEEYTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT- 528
QEEY KE I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F KLYQ
Sbjct: 497 QEEYKKEGIAWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDKLYQNH 555
Query: 529 FKSNKRFIKP-KLSRTS-----FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKC 582
N+ F KP K +R + F + HYAG V Y +L+KNKD + LL ASK
Sbjct: 556 MGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKE 615
Query: 583 PFVSGXXXXXXXXXXXXXXXXXIGSRFKL-------QLQSLMETLNSTEPHYIRCVKPNN 635
P V+ S F+ L LM+ L ST PH++RC+ PN
Sbjct: 616 PLVAELFKAPEEPAGGGKKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNE 675
Query: 636 ALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVL-DGNYDD 694
+P + + ++ QL+C GVLE IRI G+P+R + EF R+ +LAP+ + G D
Sbjct: 676 LKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDG 735
Query: 695 KVACEKILD--KMGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIAR 752
K EKIL +M Y++G TKVF +AG + L+ R E L + Q IR Y+ R
Sbjct: 736 KTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIR 795
Query: 753 KEFIALRKAAIVLQSYWRGI 772
K + L+ I L R I
Sbjct: 796 KAYKKLQDQRIGLSVIQRNI 815
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 788
Score = 530 bits (1364), Expect = e-150, Method: Compositional matrix adjust.
Identities = 299/761 (39%), Positives = 427/761 (56%), Gaps = 33/761 (4%)
Query: 10 GSHVWVEHPELAWVDGEVFKISAEEVHVHTTN--GQTVITNISKVFPKDTEAPPGGVDDM 67
G VW HP + G + I + + + N G+T + I++VFP + ++ V+D
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKD-VEDN 61
Query: 68 TKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGE 127
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G
Sbjct: 62 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 121
Query: 128 LSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV 187
+ PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ +
Sbjct: 122 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDI 177
Query: 188 EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQI 247
+++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 178 YDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 237
Query: 248 SDPERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLNQSNCYALDGVDDTEEYLATRRAM 306
ERNYH FY LCA E +RE+ L P +F YLN+ +DD +++ AM
Sbjct: 238 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGGSLKDPLLDDHGDFIRMCTAM 297
Query: 307 DIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNTTAELLKCDAK 366
+G+ +EE+ +FRVVA +LHLGNI+F + KS L AELL D
Sbjct: 298 KKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGGCNLKNKSTQALEYCAELLGLDQD 357
Query: 367 SLEDALINRVMVTPE-----EVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIG 421
L +L RVM+T VI L A +RDALAKTVYS LFD +V+++N
Sbjct: 358 DLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARDALAKTVYSHLFDHVVNRVNQCFP 417
Query: 422 QDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEINW 481
+ +S IGVLDI GFE F+ NSFEQFCIN+ NEKLQQ FN+ + K EQE Y KE +
Sbjct: 418 FETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKLQQFFNERILKEEQELYQKEGLGV 476
Query: 482 SYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKSNKRFIKPKLS 541
+ + +VDNQD +DLIE + GI+ +LDE P+ + + F ++Q K + R P+ S
Sbjct: 477 NEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSDQHFTSAVHQKHKDHFRLSIPRKS 536
Query: 542 RTS----------FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFV------ 585
+ + F I H+AG V Y F++KN D + + L+ S+ F+
Sbjct: 537 KLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDALHMSLESLICESRDKFIRELFES 596
Query: 586 SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENA 645
S +G++FK QL L++ L ST +IRC+KPN + FE A
Sbjct: 597 STNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRSTGASFIRCIKPNLKMTSHHFEGA 656
Query: 646 NIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDGNYDDKVACEKILDKM 705
I+ QL+C G++ + + G+P+R +F+E + + PD L D ++ C+ + +
Sbjct: 657 QILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKKYMPDKL-ARLDPRLFCKALFKAL 715
Query: 706 GLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQR 744
GL Y+ G TKVF R G+ AE D + A +++R
Sbjct: 716 GLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAELVKR 756
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii
Length = 838
Score = 528 bits (1361), Expect = e-150, Method: Compositional matrix adjust.
Identities = 307/802 (38%), Positives = 454/802 (56%), Gaps = 57/802 (7%)
Query: 12 HVWVEHPELAWVDGEVFKISAEEVHVHTTNGQTVIT----NISKVFPKDTEAPPGGVDDM 67
+ WV P+ + E+ EE+ V + + T +I ++ P E ++DM
Sbjct: 33 NCWVPDPKEGFASAEIQSSKGEEITVKIVSDNSTRTVKKDDIQQMNPPKFEK----LEDM 88
Query: 68 TKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGE 127
++YL+E VL+NL RY IYTY+G IA+NP++RLP +Y ++ +Y+G + E
Sbjct: 89 ANMTYLNEASVLNNLRGRYTAGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTE 147
Query: 128 LSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT- 186
+ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE TK ++ YLA + V+ +T
Sbjct: 148 IPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVA--CAVKKKTS 205
Query: 187 -----------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVR 235
+E Q++++NPVLEA+GNAKT RNNNSSRFGKF+ + F G+I+GA +
Sbjct: 206 EEEEADQKKGSLEDQIIQANPVLEAYGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIE 265
Query: 236 TYLLERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLG-DPKSFHYLNQSNCYALDGV 293
TYLLE+SRV ERNYH FY +C+ A PE+ E + D + ++NQ C +D +
Sbjct: 266 TYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNEVMLITPDSGLYSFINQG-CLTVDNI 324
Query: 294 DDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEF---AKGEEADS-SVIKDEK 349
DD EE+ A DI+G ++EE+ ++F+ A+ILH+G ++F + E+A+S + EK
Sbjct: 325 DDVEEFKLCDEAFDILGFTKEEKTSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEK 384
Query: 350 SRFHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLF 409
F L +A L AL+ + E++T+ + + S AL+K++Y R+F
Sbjct: 385 VAF-------LCGINAGDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMF 437
Query: 410 DWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKM 469
+WLV ++N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +
Sbjct: 438 NWLVKRVNRTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVL 497
Query: 470 EQEEYTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT 528
EQEEY KE I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F YQ
Sbjct: 498 EQEEYKKEGIQWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDYSYQN 556
Query: 529 -FKSNKRFIKP-KLSRTS-----FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASK 581
N+ F KP K +R + F + HYAG V Y +LDKNKD + LL SK
Sbjct: 557 HIGKNRMFTKPGKPTRPNQGHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSK 616
Query: 582 CPFVS--------GXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKP 633
P V+ I + + L LM+ L ST PH++RC+ P
Sbjct: 617 EPLVAELFRAPDEPAGGAGGKKKKKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIP 676
Query: 634 NNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVL-DGNY 692
N +P + + ++ QL+C GVLE IRI G+P+R + EF R+ +LAP+ + G
Sbjct: 677 NELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFV 736
Query: 693 DDKVACEKILD--KMGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYI 750
D K EKIL +M Y++G TKVF +AG + L+ R E L + Q IR Y+
Sbjct: 737 DGKTVSEKILTGLQMDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYL 796
Query: 751 ARKEFIALRKAAIVLQSYWRGI 772
RK + L+ I L R I
Sbjct: 797 IRKAYKKLQDQRIGLSVIQRNI 818
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 840
Score = 528 bits (1360), Expect = e-150, Method: Compositional matrix adjust.
Identities = 306/799 (38%), Positives = 449/799 (56%), Gaps = 52/799 (6%)
Query: 12 HVWVEHPELAWVDGEVFKISAEEVHVHTTNGQTVIT----NISKVFPKDTEAPPGGVDDM 67
+ WV P+ + E+ EE+ V + + T +I ++ P E ++DM
Sbjct: 33 NCWVPDPKEGFASAEIQSSKGEEITVKIVSDNSTRTVKKDDIQQMNPPKFEK----LEDM 88
Query: 68 TKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGE 127
++YL+E VL+NL RY IYTY+G IA+NP++RLP +Y ++ +Y+G + E
Sbjct: 89 ANMTYLNEASVLNNLRGRYTAGLIYTYSGLFCIAVNPYRRLP-IYTDSVIAKYRGKRKTE 147
Query: 128 LSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGR-------- 179
+ PH+F++AD AY+ M+ + ++ S L++GESGAGKTE+TK ++ Y A +
Sbjct: 148 IPPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTESTKKVIMYFARVAANLYKQKEEP 207
Query: 180 -SGVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYL 238
+ +E Q++E+NPVLEAFGNAKTVRNNNSSRFGKF+ + F G+I+GA + TYL
Sbjct: 208 VPNLRASNLEDQIIEANPVLEAFGNAKTVRNNNSSRFGKFIRIHFGPTGKIAGADIETYL 267
Query: 239 LERSRVCQISDPERNYHCFYLLCA-APPEVREKFKLG-DPKSFHYLNQSNCYALDGVDDT 296
LE+SRV ERNYH FY +C+ A PE+ E + D + ++NQ C +D +DD
Sbjct: 268 LEKSRVTYQQSAERNYHIFYQICSNAIPELNEVMLITPDSGLYSFINQG-CLTVDNIDDV 326
Query: 297 EEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEF---AKGEEADS-SVIKDEKSRF 352
EE+ A DI+G ++EE+ ++F+ A+ILH+G ++F + E+A+S + EK F
Sbjct: 327 EEFKLCDEAFDILGFTKEEKTSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAF 386
Query: 353 HLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWL 412
L +A L AL+ + E++T+ + + S AL+K++Y R+F+WL
Sbjct: 387 -------LCGINAGDLLKALLKPKVKVGTEMVTKGQNLQQVINSVGALSKSLYDRMFNWL 439
Query: 413 VDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQE 472
V ++N ++ IGVLDI GFE F NSFEQ CIN+TNE+LQQ FN H+F +EQE
Sbjct: 440 VKRVNRTLDTKAKRNYYIGVLDIAGFEIFDFNSFEQLCINYTNERLQQFFNHHMFVLEQE 499
Query: 473 EYTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT-FK 530
EY KE I W +I+F +D Q +DLIE KP GI+++L+E CMFPK+ ++F YQ
Sbjct: 500 EYKKEGIQWEFIDFGMDLQMCIDLIE-KPMGILSILEEECMFPKADDKSFQDYSYQNHIG 558
Query: 531 SNKRFIKP-KLSRTS-----FTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPF 584
N+ F KP K +R + F + HYAG V Y +LDKNKD + LL SK P
Sbjct: 559 KNRMFTKPGKPTRPNQGHAHFELHHYAGNVPYSIAGWLDKNKDPINENVVSLLAVSKEPL 618
Query: 585 VS--------GXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNA 636
V+ I + + L LM L T PH++RC+ PN
Sbjct: 619 VAELFRAPDEPAGGAGGKKKKKSSAFQTISAVHRESLNKLMCNLRRTNPHFVRCIIPNLE 678
Query: 637 LRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVL-DGNYDDK 695
P + + ++ QL+C GVLE IRI G+P+R + EF R+ +LAP+ + G D K
Sbjct: 679 KDPGLVDAELVLHQLQCNGVLEGIRICRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGK 738
Query: 696 VACEKILD--KMGLKGYQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIARK 753
EKIL +M Y++G TKVF +AG + L+ R E L + Q IR Y+ RK
Sbjct: 739 TVSEKILTGLQMDPSEYRLGTTKVFFKAGVLGNLEEMRDERLSKIISMFQAHIRGYLIRK 798
Query: 754 EFIALRKAAIVLQSYWRGI 772
+ L+ I L R I
Sbjct: 799 AYKKLQDQRIGLSVIQRNI 817
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
Length = 814
Score = 523 bits (1346), Expect = e-148, Method: Compositional matrix adjust.
Identities = 300/787 (38%), Positives = 430/787 (54%), Gaps = 59/787 (7%)
Query: 10 GSHVWVEHPELAWVDGEVFKISAEEVHVHTTN--GQTVITNISKVFPKDTEAPPGGVDDM 67
G VW HP + G + I + + + N G+T + I++VFP + ++ V+D
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKD-VEDN 61
Query: 68 TKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGE 127
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G
Sbjct: 62 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 121
Query: 128 LSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV 187
+ PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ +
Sbjct: 122 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDI 177
Query: 188 EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQI 247
+ +++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 178 DDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 237
Query: 248 SDPERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLN----------------------- 283
ERNYH FY LCA E +RE+ L P +F YLN
Sbjct: 238 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSP 297
Query: 284 ---QSNCYALDGVDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEA 340
++ G+DD +++ AM +G+ +EE+ +FRVVA +LHLGNI+F +
Sbjct: 298 EYLKAGSLKDPGLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGST 357
Query: 341 DSSVIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPE-----EVITRTLDPVAAVG 395
KS L AELL D L +L RVM+T VI L A
Sbjct: 358 SGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANN 417
Query: 396 SRDALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTN 455
+RDALAKTVYS LFD +V+++N + +S IGVLDI GFE F+ NSFEQFCIN+ N
Sbjct: 418 ARDALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCN 476
Query: 456 EKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPK 515
EKLQQ FN+ + K EQE Y KE + + + +VDNQD +DLIE + GI+ +LDE P+
Sbjct: 477 EKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQ 536
Query: 516 STHETFAQKLYQTFKSNKRFIKPKLSRTS----------FTISHYAGEVTYLADLFLDKN 565
+ + F ++Q K + R P+ S+ + F I H+AG V Y F++KN
Sbjct: 537 PSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKN 596
Query: 566 KDYVVAEHQVLLTASKCPFV------SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMET 619
D + + L+ S+ F+ S +G++FK QL L++
Sbjct: 597 NDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDK 656
Query: 620 LNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHR 679
L ST +IRC+KPN + FE A I+ QL+C G++ + + G+P+R +F+E +
Sbjct: 657 LRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNM 716
Query: 680 FGVLAPDVLDGNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGN 737
+ PD L D ++ C+ + +GL Y+ G TKVF R G+ AE D +
Sbjct: 717 YKKYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDH 775
Query: 738 AARIIQR 744
A +++R
Sbjct: 776 LAELVKR 782
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
Length = 858
Score = 521 bits (1342), Expect = e-147, Method: Compositional matrix adjust.
Identities = 314/849 (36%), Positives = 450/849 (53%), Gaps = 80/849 (9%)
Query: 10 GSHVWVEHPELAWVDGEVFKISAEEVHVHTTN--GQTVITNISKVFPKDTEAPPGGVDDM 67
G VW HP + G + I + + + N G+T + I++VFP + E V+D
Sbjct: 4 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDN 62
Query: 68 TKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGE 127
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G
Sbjct: 63 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 122
Query: 128 LSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV 187
+ PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ +
Sbjct: 123 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDI 178
Query: 188 EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQI 247
+ +++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 179 DDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 238
Query: 248 SDPERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLN--------------------QSN 286
ERNYH FY LCA E +RE+ L P +F YLN +S
Sbjct: 239 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSP 298
Query: 287 CYALDG------VDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEA 340
Y G +DD +++ AM +G+ +EE+ +FRVVA +LHLGNI+F +
Sbjct: 299 EYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGST 358
Query: 341 DSSVIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPE-----EVITRTLDPVAAVG 395
KS L AELL D L +L RVM+T VI L A
Sbjct: 359 SGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANN 418
Query: 396 SRDALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTN 455
+RDALAKTVYS LFD +V+++N + +S IGVLDI GFE F+ NSFEQFCIN+ N
Sbjct: 419 ARDALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCN 477
Query: 456 EKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPK 515
EKLQQ FN+ + K EQE Y KE + + + +VDNQD +DLIE + GI+ +LDE P+
Sbjct: 478 EKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQ 537
Query: 516 STHETFAQKLYQTFKSNKRFIKPKLSRTS----------FTISHYAGEVTYLADLFLDKN 565
+ + F ++Q K + R P+ S+ + F I H+AG V Y F++KN
Sbjct: 538 PSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKN 597
Query: 566 KDYVVAEHQVLLTASKCPFV------SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMET 619
D + + L+ S+ F+ S +G++FK QL L++
Sbjct: 598 NDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDK 657
Query: 620 LNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHR 679
L ST +IRC+KPN + FE A I+ QL+C G++ + + G+P+R +F+E +
Sbjct: 658 LRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNM 717
Query: 680 FGVLAPDVLDGNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGN 737
+ PD L D ++ C+ + +GL Y+ G TKVF R G+ AE D +
Sbjct: 718 YKKYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDH 776
Query: 738 AARIIQRQIRTYIARKEFIALRKAAIVLQSYWRGILAC-----KLYEQLR-REAAALKIQ 791
A +++R I S W+ + C KL +++ R A +K+Q
Sbjct: 777 LAELVKRVNHWLIC---------------SRWKKVQWCSLSVIKLKNKIKYRAEACIKMQ 821
Query: 792 KNFHSYTAR 800
K + +
Sbjct: 822 KTIRMWLCK 830
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
Length = 814
Score = 521 bits (1341), Expect = e-147, Method: Compositional matrix adjust.
Identities = 302/787 (38%), Positives = 431/787 (54%), Gaps = 59/787 (7%)
Query: 10 GSHVWVEHPELAWVDGEVFKISAEEVHVHTTN--GQTVITNISKVFPKDTEAPPGGVDDM 67
G VW HP + G + I + + + N G+T + I++VFP + ++ V+D
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKD-VEDN 61
Query: 68 TKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGE 127
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G
Sbjct: 62 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 121
Query: 128 LSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV 187
+ PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ +
Sbjct: 122 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDI 177
Query: 188 EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQI 247
+ +++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 178 DDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 237
Query: 248 SDPERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLN--------------------QSN 286
ERNYH FY LCA E +RE+ L P +F YLN +S
Sbjct: 238 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSP 297
Query: 287 CYALDG------VDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEA 340
Y G +DD +++ AM +G+ +EE+ +FRVVA +LHLGNI+F +
Sbjct: 298 EYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGST 357
Query: 341 DSSVIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPE-----EVITRTLDPVAAVG 395
KS L AELL D L +L RVM+T VI L A
Sbjct: 358 SGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANN 417
Query: 396 SRDALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTN 455
+RDALAKTVYS LFD +V+++N + +S IGVLDI GFE F+ NSFEQFCIN+ N
Sbjct: 418 ARDALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCN 476
Query: 456 EKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPK 515
EKLQQ FN+ + K EQE Y KE + + + +VDNQD +DLIE + GI+ +LDE P+
Sbjct: 477 EKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQ 536
Query: 516 STHETFAQKLYQTFKSNKRFIKPKLSRTS----------FTISHYAGEVTYLADLFLDKN 565
+ + F ++Q K + R P+ S+ + F I H+AG V Y F++KN
Sbjct: 537 PSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKN 596
Query: 566 KDYVVAEHQVLLTASKCPFV------SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMET 619
D + + L+ S+ F+ S +G++FK QL L++
Sbjct: 597 NDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDK 656
Query: 620 LNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHR 679
L ST +IRC+KPN + FE A I+ QL+C G++ + + G+P+R +F+E +
Sbjct: 657 LRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNM 716
Query: 680 FGVLAPDVLDGNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGN 737
+ PD L D ++ C+ + +GL Y+ G TKVF R G+ AE D +
Sbjct: 717 YKKYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDH 775
Query: 738 AARIIQR 744
A +++R
Sbjct: 776 LAELVKR 782
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
Length = 814
Score = 519 bits (1337), Expect = e-147, Method: Compositional matrix adjust.
Identities = 303/787 (38%), Positives = 429/787 (54%), Gaps = 59/787 (7%)
Query: 10 GSHVWVEHPELAWVDGEVFKISAEEVHVHTTN--GQTVITNISKVFPKDTEAPPGGVDDM 67
G VW HP + G + I + + + N G+T + I++VFP + E V+D
Sbjct: 3 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAE-EDSKKDVEDN 61
Query: 68 TKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGE 127
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G
Sbjct: 62 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 121
Query: 128 LSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV 187
+ PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ +
Sbjct: 122 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDI 177
Query: 188 EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQI 247
+++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 178 YDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 237
Query: 248 SDPERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLN--------------------QSN 286
ERNYH FY LCA E +RE+ L P +F YLN +S
Sbjct: 238 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSP 297
Query: 287 CYALDG------VDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEA 340
Y G +DD +++ AM +G+ +EE+ +FRVVA +LHLGNI+F +
Sbjct: 298 EYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGST 357
Query: 341 DSSVIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPE-----EVITRTLDPVAAVG 395
KS L AELL D L +L RVM+T VI L A
Sbjct: 358 SGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANN 417
Query: 396 SRDALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTN 455
+RDALAKTVYS LFD +V+++N + +S IGVLDI GFE F+ NSFEQFCIN+ N
Sbjct: 418 ARDALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCN 476
Query: 456 EKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPK 515
EKLQQ FN+ + K EQE Y KE + + + +VDNQD +DLIE + GI+ +LDE P+
Sbjct: 477 EKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQ 536
Query: 516 STHETFAQKLYQTFKSNKRFIKPKLSRTS----------FTISHYAGEVTYLADLFLDKN 565
+ + F ++Q K + R P+ S+ + F I H+AG V Y F++KN
Sbjct: 537 PSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKN 596
Query: 566 KDYVVAEHQVLLTASKCPFV------SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMET 619
D + + L+ S+ F+ S +G++FK QL L++
Sbjct: 597 NDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDK 656
Query: 620 LNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHR 679
L ST +IRC+KPN + FE A I+ QL+C G++ + + G+P+R +F+E +
Sbjct: 657 LRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNM 716
Query: 680 FGVLAPDVLDGNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGN 737
+ PD L D ++ C+ + +GL Y+ G TKVF R G+ AE D +
Sbjct: 717 YKKYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDH 775
Query: 738 AARIIQR 744
A +++R
Sbjct: 776 LAELVKR 782
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
pdb|4E7Z|B Chain B, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form
Length = 798
Score = 519 bits (1336), Expect = e-147, Method: Compositional matrix adjust.
Identities = 301/784 (38%), Positives = 430/784 (54%), Gaps = 59/784 (7%)
Query: 13 VWVEHPELAWVDGEVFKISAEEVHVHTTN--GQTVITNISKVFPKDTEAPPGGVDDMTKL 70
VW HP + G + I + + + N G+T + I++VFP + ++ V+D L
Sbjct: 16 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKD-VEDNCSL 74
Query: 71 SYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELSP 130
YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G + P
Sbjct: 75 MYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPP 134
Query: 131 HVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQ 190
HVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ ++ +
Sbjct: 135 HVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDDR 190
Query: 191 VLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISDP 250
++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 191 IVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKE 250
Query: 251 ERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLN--------------------QSNCYA 289
ERNYH FY LCA E +RE+ L P +F YLN +S Y
Sbjct: 251 ERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYL 310
Query: 290 LDG------VDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSS 343
G +DD +++ AM +G+ +EE+ +FRVVA +LHLGNI+F +
Sbjct: 311 KAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGG 370
Query: 344 VIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPE-----EVITRTLDPVAAVGSRD 398
KS L AELL D L +L RVM+T VI L A +RD
Sbjct: 371 CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARD 430
Query: 399 ALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKL 458
ALAKTVYS LFD +V+++N + +S IGVLDI GFE F+ NSFEQFCIN+ NEKL
Sbjct: 431 ALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKL 489
Query: 459 QQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTH 518
QQ FN+ + K EQE Y KE + + + +VDNQD +DLIE + GI+ +LDE P+ +
Sbjct: 490 QQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSD 549
Query: 519 ETFAQKLYQTFKSNKRFIKPKLSRTS----------FTISHYAGEVTYLADLFLDKNKDY 568
+ F ++Q K + R P+ S+ + F I H+AG V Y F++KN D
Sbjct: 550 QHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDA 609
Query: 569 VVAEHQVLLTASKCPFV------SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNS 622
+ + L+ S+ F+ S +G++FK QL L++ L S
Sbjct: 610 LHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRS 669
Query: 623 TEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGV 682
T +IRC+KPN + FE A I+ QL+C G++ + + G+P+R +F+E + +
Sbjct: 670 TGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKK 729
Query: 683 LAPDVLDGNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAAR 740
PD L D ++ C+ + +GL Y+ G TKVF R G+ AE D + A
Sbjct: 730 YMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAE 788
Query: 741 IIQR 744
+++R
Sbjct: 789 LVKR 792
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
Length = 1052
Score = 518 bits (1335), Expect = e-147, Method: Compositional matrix adjust.
Identities = 302/787 (38%), Positives = 431/787 (54%), Gaps = 59/787 (7%)
Query: 10 GSHVWVEHPELAWVDGEVFKISAEEVHVHTTN--GQTVITNISKVFPKDTEAPPGGVDDM 67
G VW HP + G + I + + + N G+T + I++VFP + ++ V+D
Sbjct: 4 GKPVWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKD-VEDN 62
Query: 68 TKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGE 127
L YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G
Sbjct: 63 CSLMYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGT 122
Query: 128 LSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTV 187
+ PHVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL S G+ +
Sbjct: 123 MPPHVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLT----ESYGTGQDI 178
Query: 188 EQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQI 247
+ +++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 179 DDRIVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQ 238
Query: 248 SDPERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLN--------------------QSN 286
ERNYH FY LCA E +RE+ L P +F YLN +S
Sbjct: 239 GKEERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSP 298
Query: 287 CYALDG------VDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEA 340
Y G +DD +++ AM +G+ +EE+ +FRVVA +LHLGNI+F +
Sbjct: 299 EYLKAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGST 358
Query: 341 DSSVIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPE-----EVITRTLDPVAAVG 395
KS L AELL D L +L RVM+T VI L A
Sbjct: 359 SGGCNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANN 418
Query: 396 SRDALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTN 455
+RDALAKTVYS LFD +V+++N + +S IGVLDI GFE F+ NSFEQFCIN+ N
Sbjct: 419 ARDALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCN 477
Query: 456 EKLQQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPK 515
EKLQQ FN+ + K EQE Y KE + + + +VDNQD +DLIE + GI+ +LDE P+
Sbjct: 478 EKLQQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQ 537
Query: 516 STHETFAQKLYQTFKSNKRFIKPKLSRTS----------FTISHYAGEVTYLADLFLDKN 565
+ + F ++Q K + R P+ S+ + F I H+AG V Y F++KN
Sbjct: 538 PSDQHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKN 597
Query: 566 KDYVVAEHQVLLTASKCPFV------SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMET 619
D + + L+ S+ F+ S +G++FK QL L++
Sbjct: 598 NDALHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDK 657
Query: 620 LNSTEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHR 679
L ST +IRC+KPN + FE A I+ QL+C G++ + + G+P+R +F+E +
Sbjct: 658 LRSTGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNM 717
Query: 680 FGVLAPDVLDGNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGN 737
+ PD L D ++ C+ + +GL Y+ G TKVF R G+ AE D +
Sbjct: 718 YKKYMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDH 776
Query: 738 AARIIQR 744
A +++R
Sbjct: 777 LAELVKR 783
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4)
Length = 784
Score = 518 bits (1335), Expect = e-147, Method: Compositional matrix adjust.
Identities = 301/784 (38%), Positives = 430/784 (54%), Gaps = 59/784 (7%)
Query: 13 VWVEHPELAWVDGEVFKISAEEVHVHTTN--GQTVITNISKVFPKDTEAPPGGVDDMTKL 70
VW HP + G + I + + + N G+T + I++VFP + ++ V+D L
Sbjct: 3 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKD-VEDNCSL 61
Query: 71 SYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELSP 130
YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G + P
Sbjct: 62 MYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPP 121
Query: 131 HVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQ 190
HVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ ++ +
Sbjct: 122 HVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDDR 177
Query: 191 VLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISDP 250
++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 178 IVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKE 237
Query: 251 ERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLN--------------------QSNCYA 289
ERNYH FY LCA E +RE+ L P +F YLN +S Y
Sbjct: 238 ERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYL 297
Query: 290 LDG------VDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSS 343
G +DD +++ AM +G+ +EE+ +FRVVA +LHLGNI+F +
Sbjct: 298 KAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGG 357
Query: 344 VIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPE-----EVITRTLDPVAAVGSRD 398
KS L AELL D L +L RVM+T VI L A +RD
Sbjct: 358 CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARD 417
Query: 399 ALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKL 458
ALAKTVYS LFD +V+++N + +S IGVLDI GFE F+ NSFEQFCIN+ NEKL
Sbjct: 418 ALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKL 476
Query: 459 QQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTH 518
QQ FN+ + K EQE Y KE + + + +VDNQD +DLIE + GI+ +LDE P+ +
Sbjct: 477 QQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSD 536
Query: 519 ETFAQKLYQTFKSNKRFIKPKLSRTS----------FTISHYAGEVTYLADLFLDKNKDY 568
+ F ++Q K + R P+ S+ + F I H+AG V Y F++KN D
Sbjct: 537 QHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDA 596
Query: 569 VVAEHQVLLTASKCPFV------SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNS 622
+ + L+ S+ F+ S +G++FK QL L++ L S
Sbjct: 597 LHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRS 656
Query: 623 TEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGV 682
T +IRC+KPN + FE A I+ QL+C G++ + + G+P+R +F+E + +
Sbjct: 657 TGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKK 716
Query: 683 LAPDVLDGNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAAR 740
PD L D ++ C+ + +GL Y+ G TKVF R G+ AE D + A
Sbjct: 717 YMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAE 775
Query: 741 IIQR 744
+++R
Sbjct: 776 LVKR 779
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State
Length = 786
Score = 517 bits (1332), Expect = e-146, Method: Compositional matrix adjust.
Identities = 301/784 (38%), Positives = 429/784 (54%), Gaps = 59/784 (7%)
Query: 13 VWVEHPELAWVDGEVFKISAEEVHVHTTN--GQTVITNISKVFPKDTEAPPGGVDDMTKL 70
VW HP + G + I + + + N G+T + I++VFP + ++ V+D L
Sbjct: 4 VWAPHPTDGFQVGNIVDIGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKD-VEDNCSL 62
Query: 71 SYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELSP 130
YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G + P
Sbjct: 63 MYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPP 122
Query: 131 HVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQ 190
HVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ + +
Sbjct: 123 HVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIYDR 178
Query: 191 VLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISDP 250
++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 179 IVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKE 238
Query: 251 ERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLN--------------------QSNCYA 289
ERNYH FY LCA E +RE+ L P +F YLN +S Y
Sbjct: 239 ERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYL 298
Query: 290 LDG------VDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSS 343
G +DD +++ AM +G+ +EE+ +FRVVA +LHLGNI+F +
Sbjct: 299 KAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGG 358
Query: 344 VIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPE-----EVITRTLDPVAAVGSRD 398
KS L AELL D L +L RVM+T VI L A +RD
Sbjct: 359 CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARD 418
Query: 399 ALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKL 458
ALAKTVYS LFD +V+++N + +S IGVLDI GFE F+ NSFEQFCIN+ NEKL
Sbjct: 419 ALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKL 477
Query: 459 QQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTH 518
QQ FN+ + K EQE Y KE + + + +VDNQD +DLIE + GI+ +LDE P+ +
Sbjct: 478 QQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSD 537
Query: 519 ETFAQKLYQTFKSNKRFIKPKLSRTS----------FTISHYAGEVTYLADLFLDKNKDY 568
+ F ++Q K + R P+ S+ + F I H+AG V Y F++KN D
Sbjct: 538 QHFTSAVHQKHKDHFRLSIPRKSKLAIHRNIRDDEGFIIRHFAGAVCYETTQFVEKNNDA 597
Query: 569 VVAEHQVLLTASKCPFV------SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNS 622
+ + L+ S+ F+ S +G++FK QL L++ L S
Sbjct: 598 LHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRS 657
Query: 623 TEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGV 682
T +IRC+KPN + FE A I+ QL+C G++ + + G+P+R +F+E + +
Sbjct: 658 TGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKK 717
Query: 683 LAPDVLDGNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAAR 740
PD L D ++ C+ + +GL Y+ G TKVF R G+ AE D + A
Sbjct: 718 YMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAE 776
Query: 741 IIQR 744
+++R
Sbjct: 777 LVKR 780
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
pdb|4E7S|B Chain B, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State
Length = 798
Score = 517 bits (1331), Expect = e-146, Method: Compositional matrix adjust.
Identities = 300/784 (38%), Positives = 430/784 (54%), Gaps = 59/784 (7%)
Query: 13 VWVEHPELAWVDGEVFKISAEEVHVHTTN--GQTVITNISKVFPKDTEAPPGGVDDMTKL 70
VW HP + G + + + + + N G+T + I++VFP + ++ V+D L
Sbjct: 16 VWAPHPTDGFQVGNIVRRGPDSLTIEPLNQKGKTFLALINQVFPAEEDSKKD-VEDNCSL 74
Query: 71 SYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELSP 130
YL+E +LHN+ RY + IYTY NILIA+NP+ +P +Y + ++ Y+G G + P
Sbjct: 75 MYLNEATLLHNIKVRYSKDRIYTYVANILIAVNPYFDIPKIYSSETIKSYQGKSLGTMPP 134
Query: 131 HVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQ 190
HVFAIAD A+R M S SI+VSGESGAGKTE TK ++RYL G G+ ++ +
Sbjct: 135 HVFAIADKAFRDMKVLKLSQSIIVSGESGAGKTENTKFVLRYLTESYG----TGQDIDDR 190
Query: 191 VLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSRVCQISDP 250
++E+NP+LEAFGNAKTVRNNNSSRFGKFVE+ F++ + G V YLLE+SR+C
Sbjct: 191 IVEANPLLEAFGNAKTVRNNNSSRFGKFVEIHFNEKSSVVGGFVSHYLLEKSRICVQGKE 250
Query: 251 ERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLN--------------------QSNCYA 289
ERNYH FY LCA E +RE+ L P +F YLN +S Y
Sbjct: 251 ERNYHIFYRLCAGASEDIRERLHLSSPDNFRYLNRGCTRYFANKETDKQILQNRKSPEYL 310
Query: 290 LDG------VDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSS 343
G +DD +++ AM +G+ +EE+ +FRVVA +LHLGNI+F +
Sbjct: 311 KAGSLKDPLLDDHGDFIRMCTAMKKIGLDDEEKLDLFRVVAGVLHLGNIDFEEAGSTSGG 370
Query: 344 VIKDEKSRFHLNTTAELLKCDAKSLEDALINRVMVTPE-----EVITRTLDPVAAVGSRD 398
KS L AELL D L +L RVM+T VI L A +RD
Sbjct: 371 CNLKNKSTQALEYCAELLGLDQDDLRVSLTTRVMLTTAGGAKGTVIKVPLKVEQANNARD 430
Query: 399 ALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKL 458
ALAKTVYS LFD +V+++N + +S IGVLDI GFE F+ NSFEQFCIN+ NEKL
Sbjct: 431 ALAKTVYSHLFDHVVNRVNQCFPFETSS-YFIGVLDIAGFEYFEHNSFEQFCINYCNEKL 489
Query: 459 QQHFNQHVFKMEQEEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTH 518
QQ FN+ + K EQE Y KE + + + +VDNQD +DLIE + GI+ +LDE P+ +
Sbjct: 490 QQFFNERILKEEQELYQKEGLGVNEVHYVDNQDCIDLIEARLVGILDILDEENRLPQPSD 549
Query: 519 ETFAQKLYQTFKSNKRFIKPKLSRTS----------FTISHYAGEVTYLADLFLDKNKDY 568
+ F ++Q K + R P+ S+ + F I H+AG V Y F++KN D
Sbjct: 550 QHFTSAVHQKHKDHFRLSIPRKSKLAIHENIRDDEGFIIRHFAGAVCYETTQFVEKNNDA 609
Query: 569 VVAEHQVLLTASKCPFV------SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNS 622
+ + L+ S+ F+ S +G++FK QL L++ L S
Sbjct: 610 LHMSLESLICESRDKFIRELFESSTNNNKDTKQKAGKLSFISVGNKFKTQLNLLLDKLRS 669
Query: 623 TEPHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGV 682
T +IRC+KPN + FE A I+ QL+C G++ + + G+P+R +F+E + +
Sbjct: 670 TGASFIRCIKPNLKMTSHHFEGAQILSQLQCSGMVSVLDLMQGGFPSRASFHELYNMYKK 729
Query: 683 LAPDVLDGNYDDKVACEKILDKMGLK--GYQIGKTKVFLRAGQMAELDARRAEVLGNAAR 740
PD L D ++ C+ + +GL Y+ G TKVF R G+ AE D + A
Sbjct: 730 YMPDKL-ARLDPRLFCKALFKALGLNEIDYKFGLTKVFFRPGKFAEFDQIMKSDPDHLAE 788
Query: 741 IIQR 744
+++R
Sbjct: 789 LVKR 792
>pdb|2W4A|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 840
Score = 504 bits (1297), Expect = e-142, Method: Compositional matrix adjust.
Identities = 297/812 (36%), Positives = 456/812 (56%), Gaps = 54/812 (6%)
Query: 11 SHVWVEHPELAWVDGEVFKISAEEVHVHTTNGQTVITNISKVFPKDTEAPP--GGVDDMT 68
S V+V HP+ ++V G + +V V T G+T+ +VF + PP ++DM
Sbjct: 33 SSVFVVHPKESFVKGTIQSKEGGKVTVKTEGGETLTVKEDQVFSMN---PPKYDKIEDMA 89
Query: 69 KLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGEL 128
+++LHEP VL+NL RY IYTY+G + +NP++ LP +Y+ ++ Y+G + E
Sbjct: 90 MMTHLHEPAVLYNLKERYAAWMIYTYSGLFCVTVNPYKWLP-VYNPKVVLAYRGKKRQEA 148
Query: 129 SPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGG--------RS 180
PH+F+I+D AY+ M+ + ++ SIL++GESGAGKT TK +++Y A + +S
Sbjct: 149 PPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTKRVIQYFATIAASGEKKKEEQS 208
Query: 181 GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLE 240
G T+E Q++ +NP+LEAFGNAKTVRN+NSSRFGKF+ + F G+++ A + TYLLE
Sbjct: 209 GKMQGTLEDQIISANPLLEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLE 268
Query: 241 RSRVCQISDPERNYHCFY-LLCAAPPEVREKFKLG-DPKSFHYLNQSNCYALDGVDDTEE 298
+SRV ER+YH FY ++ PE+ + + +P +HY++Q + +DD EE
Sbjct: 269 KSRVTFQLPAERSYHIFYQIMSNKKPELIDMLLITTNPYDYHYVSQGEI-TVPSIDDQEE 327
Query: 299 YLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGE-----EADSSVIKDEKSRFH 353
+AT A+DI+G S +E+ AI+++ A++H GN++F + + E D + + D+ +
Sbjct: 328 LMATDSAIDILGFSADEKTAIYKLTGAVMHYGNLKFKQKQREEQAEPDGTEVADKAAYLM 387
Query: 354 LNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLV 413
+AELLK A + VT + +++ + V A LAK VY ++F W+V
Sbjct: 388 GLNSAELLK--ALCYPRVKVGNEFVTKGQTVSQVHNSVGA------LAKAVYEKMFLWMV 439
Query: 414 DKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEE 473
+IN + + IGVLDI GFE F NSFEQ CINFTNEKLQQ FN H+F +EQEE
Sbjct: 440 IRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEE 499
Query: 474 YTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLY-QTFKS 531
Y KE I W +I+F +D ++LIE KP GI ++L+E CMFPK+T +F KLY Q
Sbjct: 500 YKKEGIEWEFIDFGMDLAACIELIE-KPMGIFSILEEECMFPKATDTSFKNKLYDQHLGK 558
Query: 532 NKRFIKPKLSR----TSFTISHYAGEVTYLADLFLDKNKD----YVVAEHQ------VLL 577
+ F KPK ++ F++ HYAG V Y +L+KNKD V+ +Q + L
Sbjct: 559 SNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEKNKDPLNETVIGLYQKSSVKTLAL 618
Query: 578 TASKCPFVSGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNAL 637
+ + + + F+ L LM L ST PH++RC+ PN
Sbjct: 619 LFATYGGEAEGGGGKKGGKKKGSSFQTVSALFRENLNKLMANLRSTHPHFVRCIIPNETK 678
Query: 638 RPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVL-APDVLDGNY-DDK 695
P E+ ++ QLRC GVLE IRI G+P+R + +F R+ VL A + +G + D K
Sbjct: 679 TPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSK 738
Query: 696 VACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIARK 753
A EK+L + + Y+ G TKVF +AG + L+ R + L Q + R ++ R
Sbjct: 739 KASEKLLGSIDVDHTQYRFGHTKVFFKAGLLGLLEEMRDDKLAEIITRTQARCRGFLMRV 798
Query: 754 EF---IALRKAAIVLQSYWRGILACKLYEQLR 782
E+ + R++ +Q R + K + ++
Sbjct: 799 EYRRMVERRESIFCIQYNVRSFMNVKHWPWMK 830
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 500 bits (1288), Expect = e-141, Method: Compositional matrix adjust.
Identities = 297/793 (37%), Positives = 441/793 (55%), Gaps = 65/793 (8%)
Query: 13 VWVEHPELAWVDGEVFKISAEEVHVH-TTNGQTVITNISKVFPKDTEAPP--GGVDDMTK 69
VWV + + + + +EV V NG+ V + + + PP V+DM +
Sbjct: 34 VWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMN---PPKFSKVEDMAE 90
Query: 70 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 129
L+ L+E VLHNL RY IYTY+G + INP+++LP +Y +++ YKG + E+
Sbjct: 91 LTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEMP 149
Query: 130 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT--- 186
PH++AIAD AYR+M+ + + SIL +GESGAGKTE TK +++YLA + + T
Sbjct: 150 PHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSIT 209
Query: 187 ---------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTY 237
+E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ + FD G I GA + TY
Sbjct: 210 QGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETY 269
Query: 238 LLERSRVCQISDPERNYHCF-YLLCAAPPEVREKFKLGDPKSFHYLNQSNCYALDGVDDT 296
LLE+SR + + ER +H F YL+ A ++R L ++ +L+ + + D
Sbjct: 270 LLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDD 328
Query: 297 EEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNT 356
E + T AM I+G +EEEQ +I RVV+++L LGNI F K D + + D NT
Sbjct: 329 EMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPD-------NT 381
Query: 357 TAELLKCDAKSLEDALINRVMVTP-----EEVITRTLDPVAAVGSRDALAKTVYSRLFDW 411
A+ + C + R ++TP +V+ + A + +ALAK + RLF W
Sbjct: 382 AAQKV-CHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRW 440
Query: 412 LVDKINSSIGQDPNSR---TIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFK 468
++ ++N ++ D R + +G+LDI GFE F++NSFEQ CIN+TNEKLQQ FN +F
Sbjct: 441 ILTRVNKAL--DKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFI 498
Query: 469 MEQEEYTKEEINWSYIEF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFAQKL 525
+EQEEY +E I W++I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +KL
Sbjct: 499 LEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKL 558
Query: 526 YQTFKSNKRFIKPKL--SRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCP 583
Q ++ +F K K +T F I HYAG+VTY A +L KN D + LL S
Sbjct: 559 IQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDK 618
Query: 584 FVSG------------------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEP 625
FV+ +G +K QL LM TL +T P
Sbjct: 619 FVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNP 678
Query: 626 HYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAP 685
+++RC+ PN+ R + +++QLRC GVLE IRI G+P R F EF R+ +LA
Sbjct: 679 NFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAA 738
Query: 686 DVL-DGNYDDKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARII 742
+ + G D K AC ++ + L Y+IG++K+F R G +A L+ R + +
Sbjct: 739 NAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAF 798
Query: 743 QRQIRTYIARKEF 755
Q Q R Y+ARK F
Sbjct: 799 QAQCRGYLARKAF 811
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 79/155 (50%), Gaps = 20/155 (12%)
Query: 894 LEKRVEELTWRLQFEKQLRTNL--EEEKAQEIAKLQDALQAMQLQVEEANFRILKEQEAA 951
LE+RV +LT TNL EEEKA+ + KL++ ++M + E R LK++E +
Sbjct: 1009 LEERVSDLT----------TNLAEEEEKAKNLTKLKNKHESM---ISELEVR-LKKEEKS 1054
Query: 952 RKAIEEAPPIVKETPVIVHDTEKIESLTAEVDSLKALLLSERQSAEEARKACMDAEVRNT 1011
R+ +E+ ++ +H E+I L A++ LKA L + + + A D +
Sbjct: 1055 RQELEKIKRKLEGESSDLH--EQIAELQAQIAELKAQLAKKEEELQAALARLEDETSQKN 1112
Query: 1012 ELVKKLEDTEEKVGQLQESMQRLEEKLCNSESENQ 1046
+KK+ + E + LQE ++ EK +++E Q
Sbjct: 1113 NALKKIRELESHISDLQEDLE--SEKAARNKAEKQ 1145
Score = 34.3 bits (77), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 73/157 (46%), Gaps = 6/157 (3%)
Query: 876 NLKMAARETGALKEAKDKLEKRVEELTWRLQFEKQLRTNLEEEKAQ---EIAKLQDALQA 932
NL + L + K+K E + EL RL+ E++ R LE+ K + E + L + +
Sbjct: 1019 NLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAE 1078
Query: 933 MQLQVEEANFRILKEQEAARKAIEEAPPIVKETPVIVHDTEKIESLTAEVDSLKALLLSE 992
+Q Q+ E ++ K++E + A+ + ET + +KI L + + L+ L SE
Sbjct: 1079 LQAQIAELKAQLAKKEEELQAAL---ARLEDETSQKNNALKKIRELESHISDLQEDLESE 1135
Query: 993 RQSAEEARKACMDAEVRNTELVKKLEDTEEKVGQLQE 1029
+ + +A K D L +LEDT + QE
Sbjct: 1136 KAARNKAEKQKRDLSEELEALKTELEDTLDTTATQQE 1172
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 973
Score = 499 bits (1284), Expect = e-141, Method: Compositional matrix adjust.
Identities = 303/820 (36%), Positives = 450/820 (54%), Gaps = 68/820 (8%)
Query: 13 VWVEHPELAWVDGEVFKISAEEVHVH-TTNGQTVITNISKVFPKDTEAPP--GGVDDMTK 69
VWV + + + + +EV V NG+ V + + + PP V+DM +
Sbjct: 34 VWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMN---PPKFSKVEDMAE 90
Query: 70 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 129
L+ L+E VLHNL RY IYTY+G + INP+++LP +Y +++ YKG + E+
Sbjct: 91 LTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEMP 149
Query: 130 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT--- 186
PH++AIAD AYR+M+ + + SIL +GESGAGKTE TK +++YLA + + T
Sbjct: 150 PHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSIT 209
Query: 187 ---------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTY 237
+E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ + FD G I GA + TY
Sbjct: 210 QGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETY 269
Query: 238 LLERSRVCQISDPERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLNQSNCYALDGVDDT 296
LLE+SR + + ER +H FY L A E +R L ++ +L+ + + D
Sbjct: 270 LLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDD 328
Query: 297 EEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNT 356
E + T AM I+G +EEEQ +I RVV+++L LGNI F K D + + D NT
Sbjct: 329 EMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPD-------NT 381
Query: 357 TAELLKCDAKSLEDALINRVMVTP-----EEVITRTLDPVAAVGSRDALAKTVYSRLFDW 411
A+ + C + R ++TP +V+ + A + +ALAK + RLF W
Sbjct: 382 AAQKV-CHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRW 440
Query: 412 LVDKINSSIGQDPNSR---TIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFK 468
++ ++N ++ D R + +G+LDI GFE F++NSFEQ CIN+TNEKLQQ FN +F
Sbjct: 441 ILTRVNKAL--DKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFI 498
Query: 469 MEQEEYTKEEINWSYIEF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFAQKL 525
+EQEEY +E I W++I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +KL
Sbjct: 499 LEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKL 558
Query: 526 YQTFKSNKRFIKPKL--SRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCP 583
Q ++ +F K K +T F I HYAG+VTY A +L KN D + LL S
Sbjct: 559 IQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDK 618
Query: 584 FVSG------------------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEP 625
FV+ +G +K QL LM TL +T P
Sbjct: 619 FVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNP 678
Query: 626 HYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAP 685
+++RC+ PN+ R + +++QLRC GVLE IRI G+P R F EF R+ +LA
Sbjct: 679 NFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAA 738
Query: 686 DVL-DGNYDDKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARII 742
+ + G D K AC ++ + L Y+IG++K+F R G +A L+ R + +
Sbjct: 739 NAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAF 798
Query: 743 QRQIRTYIARKEFIALRKAAIVLQSYWRGILACKLYEQLR 782
Q Q R Y+ARK F ++ ++ R C Y +LR
Sbjct: 799 QAQCRGYLARKAFAKRQQQLTAMKVIQRN---CAAYLKLR 835
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 971
Score = 499 bits (1284), Expect = e-141, Method: Compositional matrix adjust.
Identities = 303/820 (36%), Positives = 450/820 (54%), Gaps = 68/820 (8%)
Query: 13 VWVEHPELAWVDGEVFKISAEEVHVH-TTNGQTVITNISKVFPKDTEAPP--GGVDDMTK 69
VWV + + + + +EV V NG+ V + + + PP V+DM +
Sbjct: 34 VWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMN---PPKFSKVEDMAE 90
Query: 70 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 129
L+ L+E VLHNL RY IYTY+G + INP+++LP +Y +++ YKG + E+
Sbjct: 91 LTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEMP 149
Query: 130 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT--- 186
PH++AIAD AYR+M+ + + SIL +GESGAGKTE TK +++YLA + + T
Sbjct: 150 PHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSIT 209
Query: 187 ---------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTY 237
+E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ + FD G I GA + TY
Sbjct: 210 QGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETY 269
Query: 238 LLERSRVCQISDPERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLNQSNCYALDGVDDT 296
LLE+SR + + ER +H FY L A E +R L ++ +L+ + + D
Sbjct: 270 LLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDD 328
Query: 297 EEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNT 356
E + T AM I+G +EEEQ +I RVV+++L LGNI F K D + + D NT
Sbjct: 329 EMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPD-------NT 381
Query: 357 TAELLKCDAKSLEDALINRVMVTP-----EEVITRTLDPVAAVGSRDALAKTVYSRLFDW 411
A+ + C + R ++TP +V+ + A + +ALAK + RLF W
Sbjct: 382 AAQKV-CHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRW 440
Query: 412 LVDKINSSIGQDPNSR---TIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFK 468
++ ++N ++ D R + +G+LDI GFE F++NSFEQ CIN+TNEKLQQ FN +F
Sbjct: 441 ILTRVNKAL--DKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFI 498
Query: 469 MEQEEYTKEEINWSYIEF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFAQKL 525
+EQEEY +E I W++I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +KL
Sbjct: 499 LEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKL 558
Query: 526 YQTFKSNKRFIKPKL--SRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCP 583
Q ++ +F K K +T F I HYAG+VTY A +L KN D + LL S
Sbjct: 559 IQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDK 618
Query: 584 FVSG------------------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEP 625
FV+ +G +K QL LM TL +T P
Sbjct: 619 FVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNP 678
Query: 626 HYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAP 685
+++RC+ PN+ R + +++QLRC GVLE IRI G+P R F EF R+ +LA
Sbjct: 679 NFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAA 738
Query: 686 DVL-DGNYDDKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARII 742
+ + G D K AC ++ + L Y+IG++K+F R G +A L+ R + +
Sbjct: 739 NAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAF 798
Query: 743 QRQIRTYIARKEFIALRKAAIVLQSYWRGILACKLYEQLR 782
Q Q R Y+ARK F ++ ++ R C Y +LR
Sbjct: 799 QAQCRGYLARKAFAKRQQQLTAMKVIQRN---CAAYLKLR 835
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|D Chain D, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 909
Score = 498 bits (1283), Expect = e-141, Method: Compositional matrix adjust.
Identities = 303/820 (36%), Positives = 450/820 (54%), Gaps = 68/820 (8%)
Query: 13 VWVEHPELAWVDGEVFKISAEEVHVHTT-NGQTVITNISKVFPKDTEAPP--GGVDDMTK 69
VWV + + + + +EV V NG+ V + + + PP V+DM +
Sbjct: 34 VWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMN---PPKFSKVEDMAE 90
Query: 70 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 129
L+ L+E VLHNL RY IYTY+G + INP+++LP +Y +++ YKG + E+
Sbjct: 91 LTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEMP 149
Query: 130 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT--- 186
PH++AIAD AYR+M+ + + SIL +GESGAGKTE TK +++YLA + + T
Sbjct: 150 PHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSIT 209
Query: 187 ---------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTY 237
+E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ + FD G I GA + TY
Sbjct: 210 QGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETY 269
Query: 238 LLERSRVCQISDPERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLNQSNCYALDGVDDT 296
LLE+SR + + ER +H FY L A E +R L ++ +L+ + + D
Sbjct: 270 LLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDD 328
Query: 297 EEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNT 356
E + T AM I+G +EEEQ +I RVV+++L LGNI F K D + + D NT
Sbjct: 329 EMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPD-------NT 381
Query: 357 TAELLKCDAKSLEDALINRVMVTP-----EEVITRTLDPVAAVGSRDALAKTVYSRLFDW 411
A+ + C + R ++TP +V+ + A + +ALAK + RLF W
Sbjct: 382 AAQKV-CHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRW 440
Query: 412 LVDKINSSIGQDPNSR---TIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFK 468
++ ++N ++ D R + +G+LDI GFE F++NSFEQ CIN+TNEKLQQ FN +F
Sbjct: 441 ILTRVNKAL--DKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFI 498
Query: 469 MEQEEYTKEEINWSYIEF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFAQKL 525
+EQEEY +E I W++I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +KL
Sbjct: 499 LEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKL 558
Query: 526 YQTFKSNKRFIKPKL--SRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCP 583
Q ++ +F K K +T F I HYAG+VTY A +L KN D + LL S
Sbjct: 559 IQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDK 618
Query: 584 FVSG------------------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEP 625
FV+ +G +K QL LM TL +T P
Sbjct: 619 FVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNP 678
Query: 626 HYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAP 685
+++RC+ PN+ R + +++QLRC GVLE IRI G+P R F EF R+ +LA
Sbjct: 679 NFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAA 738
Query: 686 DVL-DGNYDDKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARII 742
+ + G D K AC ++ + L Y+IG++K+F R G +A L+ R + +
Sbjct: 739 NAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAF 798
Query: 743 QRQIRTYIARKEFIALRKAAIVLQSYWRGILACKLYEQLR 782
Q Q R Y+ARK F ++ ++ R C Y +LR
Sbjct: 799 QAQCRGYLARKAFAKRQQQLTAMKVIQRN---CAAYLKLR 835
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|C Chain C, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|E Chain E, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|G Chain G, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
Length = 820
Score = 493 bits (1270), Expect = e-139, Method: Compositional matrix adjust.
Identities = 298/793 (37%), Positives = 440/793 (55%), Gaps = 65/793 (8%)
Query: 13 VWVEHPELAWVDGEVFKISAEEVHVHTT-NGQTVITNISKVFPKDTEAPP--GGVDDMTK 69
VWV + + + + +EV V NG+ V + + + PP V+DM +
Sbjct: 34 VWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMN---PPKFSKVEDMAE 90
Query: 70 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 129
L+ L+E VLHNL RY IYTY+G + INP+++LP +Y +++ YKG + E+
Sbjct: 91 LTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEMP 149
Query: 130 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT--- 186
PH++AIAD AYR+M+ + + SIL +GESGAGKTE TK +++YLA + + T
Sbjct: 150 PHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSIT 209
Query: 187 ---------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTY 237
+E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ + FD G I GA + TY
Sbjct: 210 QGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETY 269
Query: 238 LLERSRVCQISDPERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLNQSNCYALDGVDDT 296
LLE+SR + + ER +H FY L A E +R L ++ +L+ + + D
Sbjct: 270 LLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDD 328
Query: 297 EEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNT 356
E + T AM I+G +EEEQ +I RVV+++L LGNI F K D + + D NT
Sbjct: 329 EMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPD-------NT 381
Query: 357 TAELLKCDAKSLEDALINRVMVTP-----EEVITRTLDPVAAVGSRDALAKTVYSRLFDW 411
A+ + C + R ++TP +V+ + A + +ALAK + RLF W
Sbjct: 382 AAQKV-CHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRW 440
Query: 412 LVDKINSSIGQDPNSR---TIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFK 468
++ ++N ++ D R + +G+LDI GFE F++NSFEQ CIN+TNEKLQQ FN +F
Sbjct: 441 ILTRVNKAL--DKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFI 498
Query: 469 MEQEEYTKEEINWSYIEF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFAQKL 525
+EQEEY +E I W++I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +KL
Sbjct: 499 LEQEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKL 558
Query: 526 YQTFKSNKRFIKPKL--SRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCP 583
Q ++ +F K K +T F I HYAG+VTY A +L KN D + LL S
Sbjct: 559 IQEQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDK 618
Query: 584 FVSG------------------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEP 625
FV+ +G +K QL LM TL +T P
Sbjct: 619 FVADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNP 678
Query: 626 HYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAP 685
+++RC+ PN+ R + +++QLRC GVLE IRI G+P R F EF R+ +LA
Sbjct: 679 NFVRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAA 738
Query: 686 DVL-DGNYDDKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARII 742
+ + G D K AC ++ + L Y+IG++K+F R G +A L+ R + +
Sbjct: 739 NAIPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEERDLKITDVIIAF 798
Query: 743 QRQIRTYIARKEF 755
Q Q R Y+ARK F
Sbjct: 799 QAQCRGYLARKAF 811
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|B Chain B, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|C Chain C, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|D Chain D, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|E Chain E, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
pdb|1BR2|F Chain F, Smooth Muscle Myosin Motor Domain Complexed With
Mgadp.Alf4
Length = 791
Score = 481 bits (1239), Expect = e-136, Method: Compositional matrix adjust.
Identities = 288/767 (37%), Positives = 428/767 (55%), Gaps = 61/767 (7%)
Query: 13 VWVEHPELAWVDGEVFKISAEEVHVHTT-NGQTVITNISKVFPKDTEAPP--GGVDDMTK 69
VWV + + + + +EV V NG+ V + + + PP V+DM +
Sbjct: 34 VWVPSEKHGFEAASIKEEKGDEVTVELQENGKKVTLSKDDIQKMN---PPKFSKVEDMAE 90
Query: 70 LSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELS 129
L+ L+E VLHNL RY IYTY+G + INP+++LP +Y +++ YKG + E+
Sbjct: 91 LTCLNEASVLHNLRERYFSGLIYTYSGLFCVVINPYKQLP-IYSEKIIDMYKGKKRHEMP 149
Query: 130 PHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRT--- 186
PH++AIAD AYR+M+ + + SIL +GESGAGKTE TK +++YLA + + T
Sbjct: 150 PHIYAIADTAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAVVASSHKGKKDTSIT 209
Query: 187 ---------VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTY 237
+E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ + FD G I GA + TY
Sbjct: 210 QGPSFSYGELEKQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVTGYIVGANIETY 269
Query: 238 LLERSRVCQISDPERNYHCFYLLCAAPPE-VREKFKLGDPKSFHYLNQSNCYALDGVDDT 296
LLE+SR + + ER +H FY L A E +R L ++ +L+ + + D
Sbjct: 270 LLEKSRAIRQAKDERTFHIFYYLIAGASEQMRNDLLLEGFNNYTFLSNGHV-PIPAQQDD 328
Query: 297 EEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSRFHLNT 356
E + T AM I+G +EEEQ +I RVV+++L LGNI F K D + + D NT
Sbjct: 329 EMFQETLEAMTIMGFTEEEQTSILRVVSSVLQLGNIVFKKERNTDQASMPD-------NT 381
Query: 357 TAELLKCDAKSLEDALINRVMVTP-----EEVITRTLDPVAAVGSRDALAKTVYSRLFDW 411
A+ + C + R ++TP +V+ + A + +ALAK + RLF W
Sbjct: 382 AAQKV-CHLMGINVTDFTRSILTPRIKVGRDVVQKAQTKEQADFAIEALAKAKFERLFRW 440
Query: 412 LVDKINSSIGQDP-NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKME 470
++ ++N ++ + + +G+LDI GFE F++NSFEQ CIN+TNEKLQQ FN +F +E
Sbjct: 441 ILTRVNKALDKTKRQGASFLGILDIAGFEIFEINSFEQLCINYTNEKLQQLFNHTMFILE 500
Query: 471 QEEYTKEEINWSYIEF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFAQKLYQ 527
QEEY +E I W++I+F +D Q ++LIE+ P G++ALLDE C FPK+T +F +KL Q
Sbjct: 501 QEEYQREGIEWNFIDFGLDLQPCIELIERPTNPPGVLALLDEECWFPKATDTSFVEKLIQ 560
Query: 528 TFKSNKRFIKPKL--SRTSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFV 585
++ +F K K +T F I HYAG+VTY A +L KN D + LL S FV
Sbjct: 561 EQGNHAKFQKSKQLKDKTEFCILHYAGKVTYNASAWLTKNMDPLNDNVTSLLNQSSDKFV 620
Query: 586 SG------------------XXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHY 627
+ +G +K QL LM TL +T P++
Sbjct: 621 ADLWKDVDRIVGLDQMAKMTESSLPSASKTKKGMFRTVGQLYKEQLTKLMTTLRNTNPNF 680
Query: 628 IRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDV 687
+RC+ PN+ R + +++QLRC GVLE IRI G+P R F EF R+ +LA +
Sbjct: 681 VRCIIPNHEKRAGKLDAHLVLEQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILAANA 740
Query: 688 L-DGNYDDKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARR 731
+ G D K AC ++ + L Y+IG++K+F R G +A L+ R
Sbjct: 741 IPKGFMDGKQACILMIKALELDPNLYRIGQSKIFFRTGVLAHLEEER 787
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
pdb|4DB1|B Chain B, Cardiac Human Myosin S1dc, Beta Isoform Complexed With
Mn-Amppnp
Length = 783
Score = 479 bits (1232), Expect = e-135, Method: Compositional matrix adjust.
Identities = 281/755 (37%), Positives = 432/755 (57%), Gaps = 42/755 (5%)
Query: 13 VWVEHPELAWVDGEVFKISAEEVHVHTTNGQTVITNISKVFPKDTEAPP--GGVDDMTKL 70
V+V + +V ++ +V T G+TV +V ++ PP ++DM L
Sbjct: 37 VFVPDDKQEFVKAKIVSREGGKVTAETEYGKTVTVKEDQVMQQN---PPKFDKIEDMAML 93
Query: 71 SYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGELSP 130
++LHEP VL+NL RY IYTY+G + +NP++ LP +Y ++ Y+G + E P
Sbjct: 94 TFLHEPAVLYNLKDRYGSWMIYTYSGLFCVTVNPYKWLP-VYTPEVVAAYRGKKRSEAPP 152
Query: 131 HVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRY---LAYLGGRSGVE---G 184
H+F+I+D AY+ M+ + ++ SIL++GESGAGKT TK +++Y +A +G RS + G
Sbjct: 153 HIFSISDNAYQYMLTDRENQSILITGESGAGKTVNTKRVIQYFAVIAAIGDRSKKDQSPG 212
Query: 185 R-TVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERSR 243
+ T+E Q++++NP LEAFGNAKTVRN+NSSRFGKF+ + F G+++ A + TYLLE+SR
Sbjct: 213 KGTLEDQIIQANPALEAFGNAKTVRNDNSSRFGKFIRIHFGATGKLASADIETYLLEKSR 272
Query: 244 VCQISDPERNYHCFY-LLCAAPPEVREKFKL-GDPKSFHYLNQSNCYALDGVDDTEEYLA 301
V ER+YH FY +L PE+ + + +P + +++Q + +DD EE +A
Sbjct: 273 VIFQLKAERDYHIFYQILSNKKPELLDMLLITNNPYDYAFISQGET-TVASIDDAEELMA 331
Query: 302 TRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFA-KGEEADSSVIKDEKSRFHLNTTAEL 360
T A D++G + EE+++++++ AI+H GN++F K E + E++ + +A L
Sbjct: 332 TDNAFDVLGFTSEEKNSMYKLTGAIMHFGNMKFKLKQREEQAEPDGTEEA----DKSAYL 387
Query: 361 LKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSI 420
+ ++ L L + + E +T+ + + + ALAK VY R+F+W+V +IN+++
Sbjct: 388 MGLNSADLLKGLCHPRVKVGNEYVTKGQNVQQVIYATGALAKAVYERMFNWMVTRINATL 447
Query: 421 GQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIN 480
+ IGVLDI GFE F NSFEQ CINFTNEKLQQ FN H+F +EQEEY KE I
Sbjct: 448 ETKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEKLQQFFNHHMFVLEQEEYKKEGIE 507
Query: 481 WSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQT-FKSNKRFIKP 538
W++I+F +D Q +DLIE KP GI+++L+E CMFPK+T TF KL+ + F KP
Sbjct: 508 WTFIDFGMDLQACIDLIE-KPMGIMSILEEECMFPKATDMTFKAKLFDNHLGKSANFQKP 566
Query: 539 K----LSRTSFTISHYAGEVTYLADLFLDKNKD----YVVAEHQ----VLLTASKCPFVS 586
+ F++ HYAG V Y +L KNKD VV +Q LL+ +
Sbjct: 567 RNIKGKPEAHFSLIHYAGIVDYNIIGWLQKNKDPLNETVVGLYQKSSLKLLSTLFANYAG 626
Query: 587 GXX--XXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFEN 644
+ + + L LM L ST PH++RC+ PN P + +N
Sbjct: 627 ADAPIEKGKGKAKKGSSFQTVSALHRENLNKLMTNLRSTHPHFVRCIIPNETKSPGVMDN 686
Query: 645 ANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVL-DGNY-DDKVACEKIL 702
++ QLRC GVLE IRI G+P R + +F R+ +L P + +G + D + EK+L
Sbjct: 687 PLVMHQLRCNGVLEGIRICRKGFPNRILYGDFRQRYRILNPAAIPEGQFIDSRKGAEKLL 746
Query: 703 DKMGL--KGYQIGKTKVFLRAGQMAELDARRAEVL 735
+ + Y+ G TKVF +AG + L+ R E L
Sbjct: 747 SSLDIDHNQYKFGHTKVFFKAGLLGLLEEMRDERL 781
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In
Pre-power Stroke State
Length = 995
Score = 476 bits (1225), Expect = e-134, Method: Compositional matrix adjust.
Identities = 278/711 (39%), Positives = 410/711 (57%), Gaps = 49/711 (6%)
Query: 60 PP--GGVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMM 117
PP +DM +L+ L+E VLHNL RY IYTY+G + INP+++LP +Y ++
Sbjct: 56 PPKFSKAEDMAELTCLNEASVLHNLRERYYSGLIYTYSGLFCVVINPYKQLP-IYTEAIV 114
Query: 118 EQYKGAQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLG 177
E Y+G + E+ PHV+A+ + AYR+M+ + + SIL +GESGAGKTE TK +++YLA++
Sbjct: 115 EMYRGKKRHEVPPHVYAVTEGAYRSMLQDREDQSILCTGESGAGKTENTKKVIQYLAHVA 174
Query: 178 ----GRS--GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISG 231
GR GV G +E+Q+L++NP+LEAFGNAKTV+N+NSSRFGKF+ + FD G I G
Sbjct: 175 SSPKGRKEPGVPGE-LERQLLQANPILEAFGNAKTVKNDNSSRFGKFIRINFDVAGYIVG 233
Query: 232 AAVRTYLLERSRVCQISDPERNYHCFYLLCAAPPEVREKFKLGDPKSFHYLNQSNCYALD 291
A + TYLLE+SR + + E ++H FY L E + L +P S HY +N +
Sbjct: 234 ANIETYLLEKSRAIRQAKDECSFHIFYQLLGGAGEQLKADLLLEPCS-HYRFLTNGPSSS 292
Query: 292 GVDDTEEYLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSVIKDEKSR 351
+ E + T ++ ++G S EE ++ R+V+A+L GNI + D + + D
Sbjct: 293 PGQERELFQETLESLRVLGFSHEEIISMLRMVSAVLQFGNIALKRERNTDQATMPD---- 348
Query: 352 FHLNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSR-----DALAKTVYS 406
NT A+ L C L +R ++TP + R A + +ALAK Y
Sbjct: 349 ---NTAAQKL-CRLLGLGVTDFSRALLTPRIKVGRDYVQKAQTKEQADFALEALAKATYE 404
Query: 407 RLFDWLVDKINSSIGQDP-NSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQH 465
RLF WLV ++N ++ + P + +G+LDI GFE F+LNSFEQ CIN+TNEKLQQ FN
Sbjct: 405 RLFRWLVLRLNRALDRSPRQGASFLGILDIAGFEIFQLNSFEQLCINYTNEKLQQLFNHT 464
Query: 466 VFKMEQEEYTKEEINWSYIEF-VDNQDVLDLIEK--KPGGIIALLDEACMFPKSTHETFA 522
+F +EQEEY +E I W++++F +D Q +DLIE+ P G++ALLDE C FPK+T ++F
Sbjct: 465 MFVLEQEEYQREGIPWTFLDFGLDLQPCIDLIERPANPPGLLALLDEECWFPKATDKSFV 524
Query: 523 QKLYQTFKSNKRFIKPKLSR--TSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTAS 580
+K+ Q + +F +P+ R F++ HYAG+V Y A+ +L KN D + LL S
Sbjct: 525 EKVAQEQGGHPKFQRPRHLRDQADFSVLHYAGKVDYKANEWLMKNMDPLNDNVAALLHQS 584
Query: 581 KCPF----------------VSGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTE 624
VS +G +K L LM TL++T
Sbjct: 585 TDRLTAEIWKDVEGIVGLEQVSSLGDGPPGGRPRRGMFRTVGQLYKESLSRLMATLSNTN 644
Query: 625 PHYIRCVKPNNALRPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLA 684
P ++RC+ PN+ R E ++ QLRC GVLE IRI G+P R F EF R+ +L
Sbjct: 645 PSFVRCIVPNHEKRAGKLEPRLVLDQLRCNGVLEGIRICRQGFPNRILFQEFRQRYEILT 704
Query: 685 PDVL-DGNYDDKVACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRA 732
P+ + G D K ACEK++ + L Y++G++K+F RAG +A+L+ RA
Sbjct: 705 PNAIPKGFMDGKQACEKMIQALELDPNLYRVGQSKIFFRAGVLAQLEEERA 755
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|J Chain J, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
Length = 697
Score = 471 bits (1213), Expect = e-133, Method: Compositional matrix adjust.
Identities = 265/678 (39%), Positives = 398/678 (58%), Gaps = 26/678 (3%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV D L+ + E + NL R++ + IYTY G+++I+ NPF+ L ++Y ++ Y G
Sbjct: 9 GVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNL-NIYKESDIKAYNG 67
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E+ PH++A+A+ AYR+M ++ +++SGESGAGKTE +K +M++L ++
Sbjct: 68 RYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQSP 127
Query: 183 EGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERS 242
G + + +L+SNP+LEAFGNAKT+RN+NSSRFGK++E+QF+ G G + YLLE+S
Sbjct: 128 NGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKS 187
Query: 243 RVCQISDPERNYHCFYLLCAAPPEVREKFKLG---DPKSFHYLNQSNCYALDGVDDTEEY 299
RV + ER++H FY + + + +LG + ++ YL +S C+ + +DD+ E+
Sbjct: 188 RVVGRTQGERSFHIFYQMLKGLSQSKLD-ELGLTPNAPAYEYLKKSGCFDVSTIDDSGEF 246
Query: 300 LATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSV----IKDEKSRFHLN 355
+AM+ +G+ E +Q++I+R++AAILH+GNI FA+ E + + D KS L
Sbjct: 247 KIIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKS---LA 303
Query: 356 TTAELLKCDAKSLEDALINRVMVTPE----EVITRTLDPVAAVGSRDALAKTVYSRLFDW 411
A LK D +SL AL R + T EVI+ +D A SRDALAK +Y RLF+W
Sbjct: 304 AAASCLKTDQQSLSIALCYRSISTGVGKRCEVISVPMDCNQAAYSRDALAKALYERLFNW 363
Query: 412 LVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQ 471
LV KIN+ I +IG+LDIYGFE F+ NSFEQ INF NEKLQQ F + K EQ
Sbjct: 364 LVSKINTIINCTTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQ 423
Query: 472 EEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKS 531
EEY +E I W IE+ +N+ + +LIEKKP G+I+LLDEAC+ KST +TF + + F+
Sbjct: 424 EEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFEK 483
Query: 532 NKRFIKPKLSR------TSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFV 585
N +S+ T F + HYAG+VTY FLDKNKD + + + +S P V
Sbjct: 484 NPHLQSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPLV 543
Query: 586 SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENA 645
G GS+F+ + +L+ TL + PHY+RC+K N+ + + +
Sbjct: 544 QGLFPPTRPEDSKKRPETA-GSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDED 602
Query: 646 NIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDG-NYDDKVACEKILDK 704
+ Q+R G+LE +R+ AG+ R + F +R+ +L N K A E IL +
Sbjct: 603 RVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGTAKQATELILQQ 662
Query: 705 MGLKGYQI--GKTKVFLR 720
+ +I GKTKVF+R
Sbjct: 663 HNIDKEEIRMGKTKVFIR 680
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 843
Score = 470 bits (1210), Expect = e-132, Method: Compositional matrix adjust.
Identities = 285/797 (35%), Positives = 429/797 (53%), Gaps = 53/797 (6%)
Query: 11 SHVWVEHPELAWVDGEVFKISAEEVHVHTTNGQTVITNISKVFPKDTEAPP--GGVDDMT 68
S V+V HP+ ++V G + V V T G+T+ +VF + PP ++DM
Sbjct: 36 SSVFVVHPKQSFVXGTIQSXEGGXVTVXTEGGETLTVKEDQVFSMN---PPXYDXIEDMA 92
Query: 69 KLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGEL 128
+++LHEP VL+NL RY IYTY+G + +NP+ LP +Y+ ++ Y+G + E
Sbjct: 93 MMTHLHEPAVLYNLXERYAAWMIYTYSGLFCVTVNPYXWLP-VYNPXVVLAYRGKKRQEA 151
Query: 129 SPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGG--------RS 180
PH+F+I+D AY+ M+ + ++ SIL++GESGAGKT T +++Y A + +S
Sbjct: 152 PPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTXRVIQYFATIAASGEKKKEEQS 211
Query: 181 GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLE 240
G T+E Q++ +NP+LEAFGNA TVRN+NSSRFG F+ + F G+++ A + TYLLE
Sbjct: 212 GKMQGTLEDQIISANPLLEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETYLLE 271
Query: 241 RSRVCQISDPERNYHCFY-LLCAAPPEVREKFKLG-DPKSFHYLNQSNCYALDGVDDTEE 298
SRV ER+YH FY ++ PE+ + + +P +HY+++ + +DD EE
Sbjct: 272 XSRVTFQLPAERSYHIFYQIMSNXXPELIDMLLITTNPYDYHYVSEGEI-TVPSIDDQEE 330
Query: 299 YLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGE-----EADSSVIKDEKSRFH 353
+AT A+DI+G S +E AI+ + A++H GN++F + + E D + + D +
Sbjct: 331 LMATDSAIDILGFSADEXTAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVADXAAYLM 390
Query: 354 LNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLV 413
+AELLK A + VT E ++ + V A LA VY +F W+V
Sbjct: 391 GLNSAELLK--ALCYPRVGVGNEAVTXGETVSEVHNSVGA------LAXAVYEXMFLWMV 442
Query: 414 DKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEE 473
+IN + + IGVLDI GFE F NSFEQ CINFTNE LQQ FN H+F +EQEE
Sbjct: 443 IRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEE 502
Query: 474 YTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLY-QTFKS 531
Y E I W +I+F +D ++LIE P GI ++L+E CMFPK+T +F LY +
Sbjct: 503 YXXEGIEWEFIDFGMDLAACIELIE-XPMGIFSILEEECMFPKATDTSFXNXLYDEHLGK 561
Query: 532 NKRFIKPKLSR----TSFTISHYAGEVTYLADLFLDKNKD----YVVAEHQ------VLL 577
+ F KPK ++ F++ HYAG V Y +L+ N D V+ +Q + L
Sbjct: 562 SNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEXNXDPLNETVIGLYQXSSVXTLAL 621
Query: 578 TASKCPFVSGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNAL 637
+ + + + F+ L LM L ST PH++RC+ PN
Sbjct: 622 LFATYGGEAEGGGGKKGGKKKGSSFQTVSALFRENLNXLMANLRSTHPHFVRCIIPNETX 681
Query: 638 RPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVL-APDVLDGNY-DDK 695
P E+ ++ QLRC GVLE IRI G+P+R + +F R+ VL A + +G + D K
Sbjct: 682 TPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSK 741
Query: 696 VACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIARK 753
A EK+L + Y G T VF AG + L+ R + L Q + R ++ R
Sbjct: 742 KASEKLLGGGDVDHTQYAFGHTXVFFXAGLLGLLEEMRDDXLAEIITATQARCRGFLMRV 801
Query: 754 EFIAL--RKAAIVLQSY 768
E+ A+ R+ +I Y
Sbjct: 802 EYRAMVERRESIFCIQY 818
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|B Chain B, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|C Chain C, Motor Domain Of Myoe, A Class-I Myosin
pdb|1LKX|D Chain D, Motor Domain Of Myoe, A Class-I Myosin
Length = 697
Score = 470 bits (1209), Expect = e-132, Method: Compositional matrix adjust.
Identities = 264/678 (38%), Positives = 397/678 (58%), Gaps = 26/678 (3%)
Query: 63 GVDDMTKLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKG 122
GV D L+ + E + NL R++ + IYTY G+++I+ NPF+ L ++Y ++ Y G
Sbjct: 9 GVPDFVLLNQITENAFIENLTMRHKSDNIYTYIGDVVISTNPFKNL-NIYKESDIKAYNG 67
Query: 123 AQFGELSPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRSGV 182
E+ PH++A+A+ AYR+M ++ +++SGESGAGKTE +K +M++L ++
Sbjct: 68 RYKYEMPPHMYALANDAYRSMRQSQENQCVIISGESGAGKTEASKKIMQFLTFVSSNQSP 127
Query: 183 EGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLERS 242
G + + +L+SNP+LEAFGNAKT+RN+NSSRFGK++E+QF+ G G + YLLE+S
Sbjct: 128 NGERISKMLLDSNPLLEAFGNAKTLRNDNSSRFGKYMEMQFNAVGSPIGGKITNYLLEKS 187
Query: 243 RVCQISDPERNYHCFYLLCAAPPEVREKFKLG---DPKSFHYLNQSNCYALDGVDDTEEY 299
RV + ER++H FY + + + +LG + ++ YL +S C+ + +DD+ E+
Sbjct: 188 RVVGRTQGERSFHIFYQMLKGLSQSKLD-ELGLTPNAPAYEYLKKSGCFDVSTIDDSGEF 246
Query: 300 LATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGEEADSSV----IKDEKSRFHLN 355
+AM+ +G+ E +Q++I+R++AAILH+GNI FA+ E + + D KS L
Sbjct: 247 KIIVKAMETLGLKESDQNSIWRILAAILHIGNITFAEAAEQRTGTTTVKVSDTKS---LA 303
Query: 356 TTAELLKCDAKSLEDALINRVMVTPE----EVITRTLDPVAAVGSRDALAKTVYSRLFDW 411
A LK D +SL AL R + T VI+ +D A SRDALAK +Y RLF+W
Sbjct: 304 AAASCLKTDQQSLSIALCYRSISTGVGKRCSVISVPMDCNQAAYSRDALAKALYERLFNW 363
Query: 412 LVDKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQ 471
LV KIN+ I +IG+LDIYGFE F+ NSFEQ INF NEKLQQ F + K EQ
Sbjct: 364 LVSKINTIINCTTEKGPVIGILDIYGFEVFQNNSFEQLNINFCNEKLQQLFIELTLKSEQ 423
Query: 472 EEYTKEEINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLYQTFKS 531
EEY +E I W IE+ +N+ + +LIEKKP G+I+LLDEAC+ KST +TF + + F+
Sbjct: 424 EEYVREGIEWKNIEYFNNKPICELIEKKPIGLISLLDEACLIAKSTDQTFLDSICKQFEK 483
Query: 532 NKRFIKPKLSR------TSFTISHYAGEVTYLADLFLDKNKDYVVAEHQVLLTASKCPFV 585
N +S+ T F + HYAG+VTY FLDKNKD + + + +S P V
Sbjct: 484 NPHLQSYVVSKDRSIGDTCFRLKHYAGDVTYDVRGFLDKNKDTLFGDLISSMQSSSDPLV 543
Query: 586 SGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNALRPAIFENA 645
G GS+F+ + +L+ TL + PHY+RC+K N+ + + +
Sbjct: 544 QGLFPPTRPEDSKKRPETA-GSQFRNAMNALITTLLACSPHYVRCIKSNDNKQAGVIDED 602
Query: 646 NIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVLAPDVLDG-NYDDKVACEKILDK 704
+ Q+R G+LE +R+ AG+ R + F +R+ +L N K A E IL +
Sbjct: 603 RVRHQVRYLGLLENVRVRRAGFAGRIEYTRFYNRYKMLCKKTWPSFNGTAKQATELILQQ 662
Query: 705 MGLKGYQI--GKTKVFLR 720
+ +I GKTKVF+R
Sbjct: 663 HNIDKEEIRMGKTKVFIR 680
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|S Chain S, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|D Chain D, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|G Chain G, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|J Chain J, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|M Chain M, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|P Chain P, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 840
Score = 469 bits (1208), Expect = e-132, Method: Compositional matrix adjust.
Identities = 285/797 (35%), Positives = 429/797 (53%), Gaps = 53/797 (6%)
Query: 11 SHVWVEHPELAWVDGEVFKISAEEVHVHTTNGQTVITNISKVFPKDTEAPP--GGVDDMT 68
S V+V HP+ ++V G + V V T G+T+ +VF + PP ++DM
Sbjct: 33 SSVFVVHPKQSFVXGTIQSXEGGXVTVXTEGGETLTVKEDQVFSMN---PPXYDXIEDMA 89
Query: 69 KLSYLHEPGVLHNLAARYELNEIYTYTGNILIAINPFQRLPHLYDTHMMEQYKGAQFGEL 128
+++LHEP VL+NL RY IYTY+G + +NP+ LP +Y+ ++ Y+G + E
Sbjct: 90 MMTHLHEPAVLYNLXERYAAWMIYTYSGLFCVTVNPYXWLP-VYNPXVVLAYRGKKRQEA 148
Query: 129 SPHVFAIADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGG--------RS 180
PH+F+I+D AY+ M+ + ++ SIL++GESGAGKT T +++Y A + +S
Sbjct: 149 PPHIFSISDNAYQFMLTDRENQSILITGESGAGKTVNTXRVIQYFATIAASGEKKKEEQS 208
Query: 181 GVEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVELQFDKNGRISGAAVRTYLLE 240
G T+E Q++ +NP+LEAFGNA TVRN+NSSRFG F+ + F G+++ A + TYLLE
Sbjct: 209 GKMQGTLEDQIISANPLLEAFGNAXTVRNDNSSRFGXFIRIHFGATGKLASADIETYLLE 268
Query: 241 RSRVCQISDPERNYHCFY-LLCAAPPEVREKFKLG-DPKSFHYLNQSNCYALDGVDDTEE 298
SRV ER+YH FY ++ PE+ + + +P +HY+++ + +DD EE
Sbjct: 269 XSRVTFQLPAERSYHIFYQIMSNXXPELIDMLLITTNPYDYHYVSEGEI-TVPSIDDQEE 327
Query: 299 YLATRRAMDIVGISEEEQDAIFRVVAAILHLGNIEFAKGE-----EADSSVIKDEKSRFH 353
+AT A+DI+G S +E AI+ + A++H GN++F + + E D + + D +
Sbjct: 328 LMATDSAIDILGFSADEXTAIYXLTGAVMHYGNLKFXQXQREEQAEPDGTEVADXAAYLM 387
Query: 354 LNTTAELLKCDAKSLEDALINRVMVTPEEVITRTLDPVAAVGSRDALAKTVYSRLFDWLV 413
+AELLK A + VT E ++ + V A LA VY +F W+V
Sbjct: 388 GLNSAELLK--ALCYPRVGVGNEAVTXGETVSEVHNSVGA------LAXAVYEXMFLWMV 439
Query: 414 DKINSSIGQDPNSRTIIGVLDIYGFESFKLNSFEQFCINFTNEKLQQHFNQHVFKMEQEE 473
+IN + + IGVLDI GFE F NSFEQ CINFTNE LQQ FN H+F +EQEE
Sbjct: 440 IRINQQLDTKQPRQYFIGVLDIAGFEIFDFNSFEQLCINFTNEXLQQFFNHHMFVLEQEE 499
Query: 474 YTKEEINWSYIEF-VDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFAQKLY-QTFKS 531
Y E I W +I+F +D ++LIE P GI ++L+E CMFPK+T +F LY +
Sbjct: 500 YXXEGIEWEFIDFGMDLAACIELIE-XPMGIFSILEEECMFPKATDTSFXNXLYDEHLGK 558
Query: 532 NKRFIKPKLSR----TSFTISHYAGEVTYLADLFLDKNKD----YVVAEHQ------VLL 577
+ F KPK ++ F++ HYAG V Y +L+ N D V+ +Q + L
Sbjct: 559 SNNFQKPKPAKGKAEAHFSLVHYAGTVDYNISGWLEXNXDPLNETVIGLYQXSSVXTLAL 618
Query: 578 TASKCPFVSGXXXXXXXXXXXXXXXXXIGSRFKLQLQSLMETLNSTEPHYIRCVKPNNAL 637
+ + + + F+ L LM L ST PH++RC+ PN
Sbjct: 619 LFATYGGEAEGGGGKKGGKKKGSSFQTVSALFRENLNXLMANLRSTHPHFVRCIIPNETX 678
Query: 638 RPAIFENANIIQQLRCGGVLEAIRISCAGYPTRRTFYEFLHRFGVL-APDVLDGNY-DDK 695
P E+ ++ QLRC GVLE IRI G+P+R + +F R+ VL A + +G + D K
Sbjct: 679 TPGAMEHELVLHQLRCNGVLEGIRICRKGFPSRVLYADFKQRYRVLNASAIPEGQFMDSK 738
Query: 696 VACEKILDKMGLKG--YQIGKTKVFLRAGQMAELDARRAEVLGNAARIIQRQIRTYIARK 753
A EK+L + Y G T VF AG + L+ R + L Q + R ++ R
Sbjct: 739 KASEKLLGGGDVDHTQYAFGHTXVFFXAGLLGLLEEMRDDXLAEIITATQARCRGFLMRV 798
Query: 754 EFIAL--RKAAIVLQSY 768
E+ A+ R+ +I Y
Sbjct: 799 EYRAMVERRESIFCIQY 815
>pdb|2F6H|X Chain X, Myosin V Cargo Binding Domain
Length = 419
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 14/130 (10%)
Query: 1322 IVKSLNSYLKTMKVNYVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGL 1381
I+ NS MK ++ + V T + ++++ FN L+++R S+ G + +
Sbjct: 207 ILTFFNSIYWCMKSFHIENEVFHAVVTTLLNYVDAICFNELIMKRNFLSWKRGLQLNYNV 266
Query: 1382 AELEQWC-----YDATEEYAGSAWDELKHIRQAVGFLVINQKPKKTLNEITKELCPVLSI 1436
LE+WC D TE L+H+ Q L + + + + +I + +C L+
Sbjct: 267 TRLEEWCKTHGLTDGTE--------CLQHLIQTAKLLQVRKYTIEDI-DILRGICYSLTP 317
Query: 1437 QQLYRISTMY 1446
QL ++ + Y
Sbjct: 318 AQLQKLISQY 327
>pdb|2IX7|C Chain C, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 58
Score = 37.4 bits (85), Expect = 0.064, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 732 AEVLGNAARIIQRQIRTYIARKEFIALRKAAIVLQSYWRGILACKLYEQLRREAAA 787
A+ L A IQ+ IR ++ RK ++ +++AAI +Q Y RG A + LRR AA
Sbjct: 1 ADKLRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLRRTKAA 56
>pdb|3I99|A Chain A, The Crystal Structure Of The
Udp-N-Acetylenolpyruvoylglucosamine Reductase From The
Vibrio Cholerae O1 Biovar Tor
Length = 357
Score = 34.7 bits (78), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 695 KVACEKILDKMGLKGYQIGKTKVFLRAGQMA--ELDARRAEVLGNAARIIQRQIRTY 749
KVA ++D+ GLKG+QIG KV + + DA +VL AA I QR Y
Sbjct: 274 KVAAGWLIDQAGLKGHQIGGAKVHPKQALVIVNTGDASAQDVLXLAADIQQRVFNCY 330
>pdb|1P8J|A Chain A, Crystal Structure Of The Proprotein Convertase Furin
pdb|1P8J|B Chain B, Crystal Structure Of The Proprotein Convertase Furin
pdb|1P8J|C Chain C, Crystal Structure Of The Proprotein Convertase Furin
pdb|1P8J|D Chain D, Crystal Structure Of The Proprotein Convertase Furin
pdb|1P8J|E Chain E, Crystal Structure Of The Proprotein Convertase Furin
pdb|1P8J|F Chain F, Crystal Structure Of The Proprotein Convertase Furin
pdb|1P8J|G Chain G, Crystal Structure Of The Proprotein Convertase Furin
pdb|1P8J|H Chain H, Crystal Structure Of The Proprotein Convertase Furin
Length = 471
Score = 32.3 bits (72), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 1109 NEKQQENQDLLIKCVSQNLGFSRSKPVAASVIYKCL-----LHWRSFE 1151
NEKQ DL KC + G S S P+AA +I L L WR +
Sbjct: 240 NEKQIVTTDLRQKCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQ 287
>pdb|2B39|A Chain A, Structure Of Mammalian C3 With An Intact Thioester At 3a
Resolution
pdb|2B39|B Chain B, Structure Of Mammalian C3 With An Intact Thioester At 3a
Resolution
Length = 1661
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Query: 1034 LEEKLCNSESENQVIRQQALAMSPTGKSLSARPKTLVIQRTPENGNVQNGEMKDVTLAVT 1093
L +++ ++ESE +++ Q T ++ +IQ TP QN M +T V
Sbjct: 966 LSDQVPDTESETKILLQGTPVAQMTEDAIDGERLKHLIQ-TPSGCGEQN--MIGMTPTVI 1022
Query: 1094 SAREPESEEKPQKSLNEKQQENQDLLIKCVSQNLGFSRSKPVAASVIYKCLLHW 1147
+ +S ++ +K EK+QE+ +L+ K +Q L F + A+ Y+ W
Sbjct: 1023 AVHYLDSTDQWEKFGLEKRQESLELIRKGYTQQLAFRQKSSAYAAFQYRPPSTW 1076
>pdb|3DZD|A Chain A, Crystal Structure Of Sigma54 Activator Ntrc4 In The
Inactive State
pdb|3DZD|B Chain B, Crystal Structure Of Sigma54 Activator Ntrc4 In The
Inactive State
Length = 368
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 152 ILVSGESGAGKTETTKMLMRYLAYLGGRSGVEGRTVEQQVLESNPVLEAFGNAK 205
+L++GESG GK +++ RY G + ++ Q++ ES E FG+ K
Sbjct: 155 VLITGESGTGKEIVARLIHRYSGRKGAFVDLNCASIPQELAES----ELFGHEK 204
>pdb|2WZM|A Chain A, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase
In Its Apo And Liganded Form
pdb|2WZM|B Chain B, Crystal Structure Of A Mycobacterium Aldo-Keto Reductase
In Its Apo And Liganded Form
pdb|2WZT|A Chain A, Crystal Structure Of A Mycobacterium Aldo-keto Reductase
In Its Apo And Liganded Form
pdb|2WZT|B Chain B, Crystal Structure Of A Mycobacterium Aldo-keto Reductase
In Its Apo And Liganded Form
Length = 283
Score = 30.8 bits (68), Expect = 6.0, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 24/56 (42%)
Query: 384 ITRTLDPVAAVGSRDALAKTVYSRLFDWLVDKINSSIGQDPNSRTIIGVLDIYGFE 439
+ R LD A +A +T L W + N I + N I LD++GFE
Sbjct: 200 VGRLLDHPAVTAIAEAHGRTAAQVLLRWSIQLGNVVISRSANPERIASNLDVFGFE 255
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.132 0.376
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,722,471
Number of Sequences: 62578
Number of extensions: 1549218
Number of successful extensions: 5091
Number of sequences better than 100.0: 109
Number of HSP's better than 100.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 39
Number of HSP's that attempted gapping in prelim test: 4391
Number of HSP's gapped (non-prelim): 184
length of query: 1527
length of database: 14,973,337
effective HSP length: 111
effective length of query: 1416
effective length of database: 8,027,179
effective search space: 11366485464
effective search space used: 11366485464
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)