Query 000432
Match_columns 1513
No_of_seqs 881 out of 5780
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 08:28:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/000432.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/000432hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0054 Multidrug resistance-a 100.0 2E-273 5E-278 2606.6 145.1 1255 236-1503 122-1380(1381)
2 PLN03130 ABC transporter C fam 100.0 2E-216 4E-221 2198.2 175.3 1348 119-1501 115-1477(1622)
3 PLN03232 ABC transporter C fam 100.0 7E-212 2E-216 2156.6 173.4 1349 119-1501 115-1474(1495)
4 TIGR00957 MRP_assoc_pro multi 100.0 1E-208 3E-213 2127.6 174.6 1358 117-1498 99-1520(1522)
5 TIGR01271 CFTR_protein cystic 100.0 2E-198 5E-203 2019.1 155.4 1254 236-1500 3-1454(1490)
6 PTZ00243 ABC transporter; Prov 100.0 2E-189 4E-194 1929.9 152.9 1258 234-1501 57-1549(1560)
7 KOG0055 Multidrug/pheromone ex 100.0 1E-156 2E-161 1480.8 114.0 1103 374-1499 93-1226(1228)
8 PTZ00265 multidrug resistance 100.0 8E-144 2E-148 1467.2 140.0 1180 309-1498 55-1465(1466)
9 KOG0058 Peptide exporter, ABC 100.0 3.1E-97 7E-102 894.5 58.4 572 926-1503 134-709 (716)
10 COG2274 SunT ABC-type bacterio 100.0 7.4E-89 1.6E-93 859.3 66.5 566 926-1498 141-708 (709)
11 COG1132 MdlB ABC-type multidru 100.0 3.3E-84 7.2E-89 825.3 67.2 545 946-1499 19-565 (567)
12 PRK11174 cysteine/glutathione 100.0 1.5E-82 3.2E-87 814.6 68.4 565 927-1499 10-585 (588)
13 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.8E-81 6.1E-86 814.9 70.7 561 927-1498 123-685 (686)
14 TIGR00958 3a01208 Conjugate Tr 100.0 1E-81 2.3E-86 818.1 66.1 560 927-1495 149-711 (711)
15 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 5E-81 1.1E-85 816.2 67.2 564 926-1495 141-709 (710)
16 TIGR01193 bacteriocin_ABC ABC- 100.0 8E-81 1.7E-85 813.3 67.6 562 926-1496 143-707 (708)
17 PRK10790 putative multidrug tr 100.0 1.4E-79 3E-84 787.3 70.2 548 946-1501 28-578 (592)
18 PRK11160 cysteine/glutathione 100.0 3.6E-79 7.7E-84 777.8 68.0 561 929-1497 6-573 (574)
19 TIGR03375 type_I_sec_LssB type 100.0 3.3E-79 7.1E-84 796.5 68.7 554 926-1486 134-689 (694)
20 PRK11176 lipid transporter ATP 100.0 5.7E-79 1.2E-83 781.0 68.8 561 930-1498 16-579 (582)
21 KOG0058 Peptide exporter, ABC 100.0 3.3E-78 7.1E-83 729.5 63.1 547 307-857 140-705 (716)
22 KOG0056 Heavy metal exporter H 100.0 1.4E-80 3E-85 703.8 36.8 538 951-1499 225-775 (790)
23 KOG0055 Multidrug/pheromone ex 100.0 1E-79 2.2E-84 780.3 48.9 518 979-1499 69-589 (1228)
24 TIGR01846 type_I_sec_HlyB type 100.0 1.6E-77 3.4E-82 780.1 69.7 565 926-1498 126-692 (694)
25 TIGR02203 MsbA_lipidA lipid A 100.0 4.2E-77 9.1E-82 762.9 68.8 547 946-1498 19-568 (571)
26 COG4988 CydD ABC-type transpor 100.0 2.6E-77 5.7E-82 711.0 61.4 514 979-1500 38-557 (559)
27 TIGR02868 CydC thiol reductant 100.0 2.6E-76 5.5E-81 747.8 62.8 521 930-1457 4-529 (529)
28 PRK13657 cyclic beta-1,2-gluca 100.0 4.1E-75 8.9E-80 744.9 70.6 547 945-1499 23-571 (588)
29 TIGR02204 MsbA_rel ABC transpo 100.0 3.5E-75 7.5E-80 745.6 68.9 566 928-1498 7-575 (576)
30 COG2274 SunT ABC-type bacterio 100.0 1.3E-74 2.7E-79 730.1 72.1 548 302-855 142-707 (709)
31 COG4987 CydC ABC-type transpor 100.0 2.3E-75 5.1E-80 681.0 59.8 500 990-1496 67-571 (573)
32 PRK11174 cysteine/glutathione 100.0 2E-74 4.4E-79 739.5 73.3 544 304-856 12-584 (588)
33 TIGR01192 chvA glucan exporter 100.0 3E-74 6.6E-79 733.5 69.8 563 929-1502 9-574 (585)
34 PRK10789 putative multidrug tr 100.0 1.4E-74 3.1E-79 735.5 65.5 513 982-1500 37-552 (569)
35 KOG0057 Mitochondrial Fe/S clu 100.0 6.9E-75 1.5E-79 677.0 55.7 507 981-1499 74-587 (591)
36 TIGR02857 CydD thiol reductant 100.0 1E-73 2.3E-78 723.9 65.1 519 946-1469 8-529 (529)
37 COG5265 ATM1 ABC-type transpor 100.0 1.2E-75 2.7E-80 661.9 38.4 491 1001-1496 2-496 (497)
38 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 4E-71 8.6E-76 719.8 73.8 543 303-855 125-684 (686)
39 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 3.7E-71 8.1E-76 723.2 72.9 543 304-853 144-709 (710)
40 TIGR00958 3a01208 Conjugate Tr 100.0 7E-71 1.5E-75 716.8 72.0 538 309-852 156-710 (711)
41 PTZ00265 multidrug resistance 100.0 8.7E-72 1.9E-76 761.1 65.5 569 923-1499 43-729 (1466)
42 TIGR01842 type_I_sec_PrtD type 100.0 4E-71 8.6E-76 701.4 66.3 529 946-1486 11-543 (544)
43 TIGR03375 type_I_sec_LssB type 100.0 2.3E-70 5E-75 713.5 73.0 536 303-845 136-689 (694)
44 TIGR01193 bacteriocin_ABC ABC- 100.0 5.9E-70 1.3E-74 711.2 73.2 542 305-854 147-707 (708)
45 PRK11176 lipid transporter ATP 100.0 1.1E-68 2.4E-73 686.1 73.6 545 305-855 16-578 (582)
46 PRK10790 putative multidrug tr 100.0 4.6E-68 1E-72 680.9 75.4 541 307-856 16-575 (592)
47 TIGR02203 MsbA_lipidA lipid A 100.0 4.8E-68 1E-72 679.3 72.8 544 306-855 6-567 (571)
48 TIGR01194 cyc_pep_trnsptr cycl 100.0 1.1E-68 2.4E-73 678.9 64.3 533 928-1477 6-551 (555)
49 COG1132 MdlB ABC-type multidru 100.0 1.6E-67 3.4E-72 672.1 72.4 534 312-856 13-564 (567)
50 PRK11160 cysteine/glutathione 100.0 2.3E-67 4.9E-72 669.6 72.1 541 308-854 10-572 (574)
51 TIGR02204 MsbA_rel ABC transpo 100.0 3.3E-67 7.1E-72 672.0 72.6 547 304-854 8-573 (576)
52 TIGR01846 type_I_sec_HlyB type 100.0 1.2E-66 2.5E-71 678.2 74.7 546 304-855 129-691 (694)
53 TIGR02868 CydC thiol reductant 100.0 5.5E-67 1.2E-71 662.6 68.3 505 307-816 6-529 (529)
54 PRK13657 cyclic beta-1,2-gluca 100.0 2.1E-66 4.6E-71 664.5 73.9 541 308-856 13-570 (588)
55 COG4988 CydD ABC-type transpor 100.0 1.5E-66 3.2E-71 619.2 66.7 529 318-857 4-556 (559)
56 PRK10789 putative multidrug tr 100.0 1.4E-66 3E-71 662.3 70.2 529 323-856 4-550 (569)
57 COG1123 ATPase components of v 100.0 3.4E-68 7.4E-73 637.0 45.8 468 631-1497 5-531 (539)
58 TIGR01192 chvA glucan exporter 100.0 6.2E-65 1.3E-69 648.0 74.4 540 308-856 13-570 (585)
59 TIGR01842 type_I_sec_PrtD type 100.0 3.1E-65 6.8E-70 647.5 69.1 521 311-844 3-542 (544)
60 PLN03232 ABC transporter C fam 100.0 5.1E-66 1.1E-70 711.8 66.8 531 949-1499 309-841 (1495)
61 PLN03130 ABC transporter C fam 100.0 1.1E-65 2.3E-70 707.7 67.7 474 1005-1499 365-841 (1622)
62 PRK10261 glutathione transport 100.0 5.3E-67 1.2E-71 669.6 49.0 484 631-1498 12-567 (623)
63 TIGR02857 CydD thiol reductant 100.0 1.5E-64 3.3E-69 640.4 67.1 507 313-828 2-529 (529)
64 KOG0056 Heavy metal exporter H 100.0 7.7E-67 1.7E-71 592.1 40.9 533 319-857 220-775 (790)
65 TIGR00956 3a01205 Pleiotropic 100.0 1.5E-65 3.3E-70 699.8 59.4 249 1220-1482 717-990 (1394)
66 PRK15134 microcin C ABC transp 100.0 2E-66 4.3E-71 655.8 45.3 448 631-1487 5-517 (529)
67 PRK10522 multidrug transporter 100.0 2.7E-64 5.9E-69 638.9 64.6 526 930-1484 4-538 (547)
68 TIGR00957 MRP_assoc_pro multi 100.0 5.7E-64 1.2E-68 692.5 73.1 549 302-855 952-1519(1522)
69 KOG0057 Mitochondrial Fe/S clu 100.0 2.2E-64 4.8E-69 589.0 58.1 527 323-855 39-585 (591)
70 PRK13549 xylose transporter AT 100.0 1.1E-65 2.4E-70 645.7 43.1 443 631-1484 5-493 (506)
71 PRK09700 D-allose transporter 100.0 1E-65 2.3E-70 646.9 41.8 440 631-1482 5-495 (510)
72 TIGR03269 met_CoM_red_A2 methy 100.0 3.3E-65 7.2E-70 643.8 44.6 219 1261-1485 279-517 (520)
73 PRK15064 ABC transporter ATP-b 100.0 4.8E-64 1E-68 634.3 50.4 201 1260-1486 318-526 (530)
74 PRK15439 autoinducer 2 ABC tra 100.0 1.1E-64 2.4E-69 636.2 44.4 446 631-1486 11-493 (510)
75 PRK10762 D-ribose transporter 100.0 6E-65 1.3E-69 638.3 41.2 436 631-1484 4-483 (501)
76 COG4987 CydC ABC-type transpor 100.0 5.9E-62 1.3E-66 568.7 61.2 545 304-854 7-571 (573)
77 PRK11288 araG L-arabinose tran 100.0 2.2E-64 4.8E-69 633.1 41.8 438 631-1484 4-484 (501)
78 TIGR01257 rim_protein retinal- 100.0 1.4E-61 3E-66 655.5 71.1 216 1259-1486 1935-2160(2272)
79 TIGR02633 xylG D-xylose ABC tr 100.0 3.7E-64 8E-69 631.8 43.0 441 632-1483 2-490 (500)
80 PTZ00243 ABC transporter; Prov 100.0 2.2E-61 4.9E-66 664.4 71.9 472 383-856 1025-1546(1560)
81 PRK10982 galactose/methyl gala 100.0 2E-63 4.2E-68 623.5 43.8 434 635-1483 2-478 (491)
82 PRK10938 putative molybdenum t 100.0 1.6E-63 3.4E-68 624.6 42.1 439 631-1479 3-486 (490)
83 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 5.5E-62 1.2E-66 617.5 52.3 480 631-1486 4-532 (552)
84 PRK11819 putative ABC transpor 100.0 5.4E-62 1.2E-66 617.5 51.7 481 631-1487 6-535 (556)
85 COG4618 ArpD ABC-type protease 100.0 5E-62 1.1E-66 563.2 46.6 526 948-1486 30-561 (580)
86 COG4172 ABC-type uncharacteriz 100.0 7.1E-62 1.5E-66 545.3 39.6 457 631-1493 6-524 (534)
87 PRK10636 putative ABC transpor 100.0 2.2E-60 4.7E-65 608.8 52.5 199 1261-1485 312-517 (638)
88 TIGR01271 CFTR_protein cystic 100.0 8.5E-59 1.8E-63 639.0 71.5 473 380-857 949-1453(1490)
89 KOG0054 Multidrug resistance-a 100.0 3E-59 6.4E-64 608.7 62.0 500 981-1498 242-743 (1381)
90 TIGR01194 cyc_pep_trnsptr cycl 100.0 1.2E-58 2.7E-63 587.3 64.5 510 308-836 11-551 (555)
91 COG4618 ArpD ABC-type protease 100.0 3.5E-59 7.5E-64 539.7 53.8 529 302-845 11-561 (580)
92 TIGR00954 3a01203 Peroxysomal 100.0 7.2E-59 1.6E-63 596.9 56.1 527 927-1471 79-653 (659)
93 PLN03140 ABC transporter G fam 100.0 6.3E-59 1.4E-63 631.5 56.5 212 1261-1482 867-1107(1470)
94 PRK11147 ABC transporter ATPas 100.0 4.1E-59 8.9E-64 598.8 51.7 200 1261-1485 319-528 (635)
95 PLN03073 ABC transporter F fam 100.0 2E-58 4.3E-63 591.2 48.1 199 1260-1483 507-712 (718)
96 COG5265 ATM1 ABC-type transpor 100.0 3.7E-58 8.1E-63 520.1 39.3 470 382-854 8-496 (497)
97 PRK10522 multidrug transporter 100.0 7.3E-56 1.6E-60 561.9 64.4 508 304-836 3-530 (547)
98 COG0488 Uup ATPase components 100.0 2.9E-56 6.3E-61 547.0 46.3 485 631-1486 3-526 (530)
99 PRK13409 putative ATPase RIL; 100.0 5.4E-57 1.2E-61 569.0 38.6 192 1261-1480 340-537 (590)
100 TIGR00954 3a01203 Peroxysomal 100.0 4.6E-53 9.9E-58 543.2 59.6 504 315-830 97-653 (659)
101 COG1129 MglA ABC-type sugar tr 100.0 1.1E-53 2.4E-58 509.3 38.9 443 630-1482 7-487 (500)
102 cd03289 ABCC_CFTR2 The CFTR su 100.0 8.4E-55 1.8E-59 501.1 27.8 239 1260-1500 1-239 (275)
103 COG3845 ABC-type uncharacteriz 100.0 3.7E-51 8E-56 475.9 34.0 443 630-1482 3-489 (501)
104 PRK14257 phosphate ABC transpo 100.0 1.3E-50 2.7E-55 478.2 26.3 257 1225-1488 35-316 (329)
105 COG1126 GlnQ ABC-type polar am 100.0 6.1E-46 1.3E-50 390.8 21.8 216 1261-1489 2-229 (240)
106 cd03288 ABCC_SUR2 The SUR doma 100.0 3.7E-45 8.1E-50 420.2 29.0 240 1258-1497 16-255 (257)
107 PRK14257 phosphate ABC transpo 100.0 2.4E-45 5.2E-50 433.3 23.3 263 565-845 23-314 (329)
108 COG1135 AbcC ABC-type metal io 100.0 3.6E-45 7.8E-50 403.5 21.5 227 1262-1499 2-246 (339)
109 cd03252 ABCC_Hemolysin The ABC 100.0 3.6E-44 7.7E-49 407.7 27.4 234 1262-1496 1-235 (237)
110 KOG0927 Predicted transporter 100.0 4.6E-44 9.9E-49 416.6 25.7 193 1261-1477 389-587 (614)
111 cd03244 ABCC_MRP_domain2 Domai 100.0 9.5E-44 2.1E-48 399.9 26.3 221 1260-1480 1-221 (221)
112 COG1117 PstB ABC-type phosphat 100.0 3.3E-44 7.1E-49 375.3 18.3 220 1260-1488 6-240 (253)
113 COG1125 OpuBA ABC-type proline 100.0 1.3E-43 2.9E-48 379.2 19.9 217 1262-1491 2-231 (309)
114 cd03251 ABCC_MsbA MsbA is an e 100.0 1.1E-42 2.3E-47 395.0 26.5 231 1262-1493 1-232 (234)
115 cd03253 ABCC_ATM1_transporter 100.0 2.4E-42 5.3E-47 392.5 27.6 233 1262-1496 1-234 (236)
116 cd03369 ABCC_NFT1 Domain 2 of 100.0 2.6E-42 5.6E-47 384.2 25.8 207 1256-1480 1-207 (207)
117 cd03254 ABCC_Glucan_exporter_l 100.0 2.8E-42 6.1E-47 390.1 26.1 226 1260-1486 1-227 (229)
118 cd03289 ABCC_CFTR2 The CFTR su 100.0 2.3E-42 4.9E-47 398.0 24.9 223 631-856 2-237 (275)
119 TIGR02314 ABC_MetN D-methionin 100.0 3E-42 6.5E-47 407.4 24.7 224 1262-1496 2-242 (343)
120 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 6.4E-42 1.4E-46 389.5 26.5 233 1262-1495 1-235 (238)
121 KOG0062 ATPase component of AB 100.0 1.5E-41 3.3E-46 393.7 26.6 193 1258-1476 359-559 (582)
122 cd03245 ABCC_bacteriocin_expor 100.0 1.5E-41 3.3E-46 381.8 25.7 219 1260-1478 1-220 (220)
123 COG1126 GlnQ ABC-type polar am 100.0 3.6E-42 7.8E-47 362.4 18.6 201 631-846 2-227 (240)
124 PRK13631 cbiO cobalt transport 100.0 1.3E-41 2.9E-46 400.4 25.3 217 1260-1486 20-266 (320)
125 COG1124 DppF ABC-type dipeptid 100.0 1E-41 2.2E-46 366.9 21.6 224 1261-1495 3-241 (252)
126 COG1127 Ttg2A ABC-type transpo 100.0 2E-41 4.4E-46 362.2 23.3 225 1260-1497 7-247 (263)
127 cd03260 ABC_PstB_phosphate_tra 100.0 1.5E-41 3.2E-46 383.7 22.6 211 1262-1483 1-227 (227)
128 cd03261 ABC_Org_Solvent_Resist 100.0 2.3E-41 5E-46 384.1 23.3 212 1262-1486 1-227 (235)
129 COG3839 MalK ABC-type sugar tr 100.0 2.2E-41 4.7E-46 390.1 23.1 216 1261-1491 3-229 (338)
130 COG1120 FepC ABC-type cobalami 100.0 2.5E-41 5.5E-46 375.8 22.0 213 1261-1486 2-229 (258)
131 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.4E-41 5.2E-46 373.8 21.6 209 1261-1486 4-228 (254)
132 COG1122 CbiO ABC-type cobalt t 100.0 2.5E-41 5.5E-46 376.7 21.9 215 1261-1487 3-230 (235)
133 PRK14269 phosphate ABC transpo 100.0 7.8E-41 1.7E-45 382.2 26.1 218 1261-1487 2-232 (246)
134 PRK14250 phosphate ABC transpo 100.0 1.1E-40 2.5E-45 379.6 26.5 222 1261-1495 3-231 (241)
135 PRK13650 cbiO cobalt transport 100.0 9E-41 2E-45 388.0 24.6 215 1261-1486 4-230 (279)
136 cd03248 ABCC_TAP TAP, the Tran 100.0 1.2E-40 2.6E-45 376.1 23.8 217 1258-1474 8-226 (226)
137 PRK11153 metN DL-methionine tr 100.0 1.5E-40 3.2E-45 396.0 25.3 224 1262-1496 2-242 (343)
138 PRK11650 ugpC glycerol-3-phosp 100.0 2E-40 4.4E-45 395.1 25.9 217 1261-1491 3-230 (356)
139 PRK10744 pstB phosphate transp 100.0 3.6E-40 7.7E-45 379.8 26.8 220 1259-1487 11-246 (260)
140 cd03263 ABC_subfamily_A The AB 100.0 1.4E-40 3E-45 374.0 22.7 210 1262-1483 1-219 (220)
141 TIGR00972 3a0107s01c2 phosphat 100.0 2.6E-40 5.7E-45 378.2 25.2 220 1262-1490 2-237 (247)
142 PRK13647 cbiO cobalt transport 100.0 1.7E-40 3.6E-45 384.8 23.7 212 1261-1484 4-226 (274)
143 PRK13637 cbiO cobalt transport 100.0 2E-40 4.4E-45 386.4 24.4 217 1261-1486 2-235 (287)
144 COG2884 FtsE Predicted ATPase 100.0 6.9E-41 1.5E-45 344.5 17.7 207 1262-1480 2-221 (223)
145 PRK14273 phosphate ABC transpo 100.0 3.8E-40 8.3E-45 378.5 26.0 222 1261-1491 7-244 (254)
146 PRK14242 phosphate transporter 100.0 3.3E-40 7.1E-45 378.9 25.4 219 1261-1488 6-240 (253)
147 PRK13635 cbiO cobalt transport 100.0 2.4E-40 5.2E-45 384.2 24.5 215 1261-1486 5-230 (279)
148 PRK11432 fbpC ferric transport 100.0 2.5E-40 5.5E-45 393.1 25.3 217 1260-1491 5-232 (351)
149 cd03250 ABCC_MRP_domain1 Domai 100.0 2.5E-40 5.5E-45 367.4 23.4 199 1262-1473 1-204 (204)
150 COG3638 ABC-type phosphate/pho 100.0 1.4E-40 3E-45 354.8 20.1 221 1261-1496 3-245 (258)
151 COG1136 SalX ABC-type antimicr 100.0 4.5E-40 9.7E-45 359.0 24.1 204 1262-1476 2-222 (226)
152 cd03291 ABCC_CFTR1 The CFTR su 100.0 1.4E-39 3E-44 376.3 29.4 219 1259-1495 37-256 (282)
153 cd03296 ABC_CysA_sulfate_impor 100.0 4.8E-40 1E-44 374.2 24.9 212 1261-1487 2-228 (239)
154 COG4615 PvdE ABC-type sideroph 100.0 9.3E-38 2E-42 349.9 42.3 469 986-1477 53-529 (546)
155 cd03256 ABC_PhnC_transporter A 100.0 3.1E-40 6.6E-45 376.5 22.9 211 1262-1484 1-233 (241)
156 TIGR00960 3a0501s02 Type II (G 100.0 2.2E-40 4.8E-45 371.2 21.3 202 1262-1474 2-216 (216)
157 TIGR01186 proV glycine betaine 100.0 2.4E-40 5.2E-45 393.1 22.7 205 1276-1491 6-225 (363)
158 cd03258 ABC_MetN_methionine_tr 100.0 3.6E-40 7.8E-45 373.9 22.8 214 1262-1486 2-231 (233)
159 cd03295 ABC_OpuCA_Osmoprotecti 100.0 4E-40 8.7E-45 375.6 23.2 216 1262-1487 1-227 (242)
160 PRK14235 phosphate transporter 100.0 8.8E-40 1.9E-44 377.7 26.2 222 1258-1488 16-254 (267)
161 PRK13646 cbiO cobalt transport 100.0 4.3E-40 9.3E-45 383.7 23.7 216 1261-1486 2-236 (286)
162 TIGR03265 PhnT2 putative 2-ami 100.0 4.2E-40 9.1E-45 392.0 24.1 216 1261-1491 4-230 (353)
163 PRK14267 phosphate ABC transpo 100.0 6.2E-40 1.4E-44 376.6 24.4 218 1261-1487 4-239 (253)
164 PRK14259 phosphate ABC transpo 100.0 1.2E-39 2.5E-44 376.9 26.8 222 1257-1487 9-255 (269)
165 PRK13643 cbiO cobalt transport 100.0 5.6E-40 1.2E-44 382.9 23.9 214 1262-1486 2-234 (288)
166 COG4178 ABC-type uncharacteriz 100.0 2.9E-37 6.2E-42 375.3 48.0 467 981-1470 86-587 (604)
167 PRK14247 phosphate ABC transpo 100.0 1.1E-39 2.3E-44 374.0 25.5 222 1261-1491 3-240 (250)
168 PRK13636 cbiO cobalt transport 100.0 7.2E-40 1.6E-44 381.2 24.4 214 1261-1486 5-232 (283)
169 TIGR02315 ABC_phnC phosphonate 100.0 5.5E-40 1.2E-44 374.8 22.9 211 1262-1484 2-234 (243)
170 cd03259 ABC_Carb_Solutes_like 100.0 4.5E-40 9.8E-45 367.9 21.4 202 1262-1478 1-213 (213)
171 KOG0065 Pleiotropic drug resis 100.0 1.1E-38 2.5E-43 405.1 36.7 199 1274-1482 802-1018(1391)
172 PRK13632 cbiO cobalt transport 100.0 1.1E-39 2.4E-44 377.6 24.9 215 1261-1486 7-232 (271)
173 cd03219 ABC_Mj1267_LivG_branch 100.0 7.1E-40 1.5E-44 372.3 22.8 212 1262-1486 1-233 (236)
174 PRK10851 sulfate/thiosulfate t 100.0 1.1E-39 2.5E-44 388.3 25.5 216 1261-1491 2-232 (353)
175 cd03294 ABC_Pro_Gly_Bertaine T 100.0 5.6E-40 1.2E-44 379.5 22.1 217 1263-1492 26-257 (269)
176 PRK14251 phosphate ABC transpo 100.0 1.1E-39 2.3E-44 374.2 24.1 219 1261-1488 4-238 (251)
177 PRK14244 phosphate ABC transpo 100.0 7E-40 1.5E-44 375.6 22.5 221 1262-1491 6-243 (251)
178 PRK14237 phosphate transporter 100.0 2.1E-39 4.5E-44 374.6 26.4 219 1260-1487 19-253 (267)
179 PRK11629 lolD lipoprotein tran 100.0 1E-39 2.2E-44 370.0 23.5 208 1261-1479 5-228 (233)
180 PRK14245 phosphate ABC transpo 100.0 1.3E-39 2.8E-44 373.2 24.3 219 1261-1488 3-237 (250)
181 cd03247 ABCC_cytochrome_bd The 100.0 9.3E-40 2E-44 354.8 21.8 178 1262-1478 1-178 (178)
182 cd03224 ABC_TM1139_LivF_branch 100.0 5.9E-40 1.3E-44 369.4 20.9 212 1262-1485 1-221 (222)
183 PRK15079 oligopeptide ABC tran 100.0 1.6E-39 3.4E-44 384.3 25.3 226 1261-1496 8-263 (331)
184 cd03291 ABCC_CFTR1 The CFTR su 100.0 4.7E-39 1E-43 371.9 28.5 239 604-850 15-253 (282)
185 PRK14262 phosphate ABC transpo 100.0 1.6E-39 3.5E-44 372.5 24.4 223 1261-1492 3-241 (250)
186 PRK09452 potA putrescine/sperm 100.0 1.8E-39 3.9E-44 388.3 25.8 217 1260-1491 13-240 (375)
187 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.7E-39 3.6E-44 369.0 24.3 211 1262-1486 2-222 (236)
188 PRK14239 phosphate transporter 100.0 1.7E-39 3.8E-44 372.8 24.7 219 1261-1488 5-239 (252)
189 TIGR03258 PhnT 2-aminoethylpho 100.0 1.3E-39 2.7E-44 388.3 24.1 218 1259-1491 3-234 (362)
190 PRK14268 phosphate ABC transpo 100.0 1.6E-39 3.4E-44 374.0 24.1 222 1260-1490 11-247 (258)
191 PRK13640 cbiO cobalt transport 100.0 2.3E-39 5E-44 376.8 25.7 216 1260-1486 4-233 (282)
192 PRK14274 phosphate ABC transpo 100.0 2.7E-39 5.9E-44 372.4 26.0 220 1261-1489 12-247 (259)
193 PRK11308 dppF dipeptide transp 100.0 2E-39 4.4E-44 383.0 25.5 227 1261-1497 5-257 (327)
194 PRK13642 cbiO cobalt transport 100.0 2.3E-39 5E-44 376.0 25.5 215 1261-1486 4-230 (277)
195 PRK13652 cbiO cobalt transport 100.0 1.9E-39 4.2E-44 376.7 24.8 214 1261-1486 3-228 (277)
196 PRK10619 histidine/lysine/argi 100.0 2.2E-39 4.8E-44 372.7 25.1 217 1259-1487 3-243 (257)
197 PRK13651 cobalt transporter AT 100.0 1.8E-39 3.9E-44 380.2 24.7 215 1261-1486 2-255 (305)
198 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 8.5E-40 1.8E-44 367.1 21.0 202 1262-1474 1-218 (218)
199 TIGR03005 ectoine_ehuA ectoine 100.0 1.9E-39 4.2E-44 372.2 24.4 214 1262-1488 1-239 (252)
200 PRK14240 phosphate transporter 100.0 3.3E-39 7.2E-44 369.9 26.2 221 1260-1489 2-238 (250)
201 PRK09536 btuD corrinoid ABC tr 100.0 2.2E-39 4.8E-44 389.3 25.8 220 1261-1495 3-236 (402)
202 PRK13634 cbiO cobalt transport 100.0 1.9E-39 4.1E-44 378.8 24.5 216 1261-1486 2-236 (290)
203 PRK11000 maltose/maltodextrin 100.0 1.6E-39 3.4E-44 390.1 24.4 216 1261-1491 3-229 (369)
204 PRK14266 phosphate ABC transpo 100.0 2.8E-39 6E-44 370.5 25.2 222 1261-1491 3-240 (250)
205 cd03226 ABC_cobalt_CbiO_domain 100.0 1.4E-39 3.1E-44 361.7 21.8 198 1263-1475 1-205 (205)
206 PRK11831 putative ABC transpor 100.0 2.6E-39 5.6E-44 374.2 24.7 223 1261-1496 7-244 (269)
207 TIGR02769 nickel_nikE nickel i 100.0 3.6E-39 7.7E-44 372.4 25.8 225 1261-1495 2-250 (265)
208 cd03264 ABC_drug_resistance_li 100.0 1.4E-39 3.1E-44 363.4 21.6 202 1262-1478 1-211 (211)
209 PRK14256 phosphate ABC transpo 100.0 4.2E-39 9.2E-44 369.4 26.0 222 1259-1489 2-240 (252)
210 PRK14236 phosphate transporter 100.0 4.5E-39 9.8E-44 372.8 26.4 220 1259-1487 23-258 (272)
211 PRK13633 cobalt transporter AT 100.0 3E-39 6.4E-44 375.7 24.9 215 1261-1486 4-234 (280)
212 PRK14248 phosphate ABC transpo 100.0 4E-39 8.7E-44 372.7 25.8 218 1261-1487 21-254 (268)
213 PRK13644 cbiO cobalt transport 100.0 3E-39 6.6E-44 374.2 24.6 213 1262-1486 2-225 (274)
214 cd03265 ABC_DrrA DrrA is the A 100.0 2.5E-39 5.4E-44 363.7 23.2 208 1262-1483 1-219 (220)
215 PRK13648 cbiO cobalt transport 100.0 2.5E-39 5.4E-44 374.5 23.7 215 1261-1486 7-232 (269)
216 PRK14238 phosphate transporter 100.0 6.6E-39 1.4E-43 371.0 27.2 221 1259-1488 22-258 (271)
217 PRK14249 phosphate ABC transpo 100.0 4.5E-39 9.8E-44 368.9 25.5 218 1261-1487 4-237 (251)
218 PRK14260 phosphate ABC transpo 100.0 3.8E-39 8.3E-44 371.0 24.9 220 1260-1488 6-246 (259)
219 TIGR03411 urea_trans_UrtD urea 100.0 3.1E-39 6.8E-44 368.4 23.8 213 1261-1486 2-232 (242)
220 TIGR02211 LolD_lipo_ex lipopro 100.0 3.2E-39 7E-44 363.1 23.6 203 1262-1475 2-220 (221)
221 PRK11022 dppD dipeptide transp 100.0 4.4E-39 9.6E-44 380.4 25.6 228 1261-1496 3-255 (326)
222 PRK10575 iron-hydroxamate tran 100.0 2.5E-39 5.4E-44 373.7 22.9 213 1261-1486 11-238 (265)
223 PRK11124 artP arginine transpo 100.0 3.8E-39 8.2E-44 367.6 24.1 214 1261-1487 2-232 (242)
224 COG3840 ThiQ ABC-type thiamine 100.0 2.2E-39 4.7E-44 330.2 19.5 210 1262-1488 2-222 (231)
225 PRK09493 glnQ glutamine ABC tr 100.0 4.4E-39 9.5E-44 366.6 24.5 213 1262-1487 2-227 (240)
226 cd03266 ABC_NatA_sodium_export 100.0 2.7E-39 5.8E-44 363.0 22.3 205 1262-1478 2-218 (218)
227 COG1135 AbcC ABC-type metal io 100.0 8.5E-40 1.8E-44 361.1 17.7 206 632-846 2-233 (339)
228 PRK14254 phosphate ABC transpo 100.0 8.9E-39 1.9E-43 372.0 27.3 219 1260-1487 38-271 (285)
229 cd03290 ABCC_SUR1_N The SUR do 100.0 4.1E-39 8.9E-44 361.5 23.4 211 1262-1473 1-218 (218)
230 COG1116 TauB ABC-type nitrate/ 100.0 1.2E-39 2.6E-44 354.9 18.3 189 631-833 3-211 (248)
231 PRK14252 phosphate ABC transpo 100.0 6.9E-39 1.5E-43 370.2 25.8 222 1257-1487 12-251 (265)
232 PRK14270 phosphate ABC transpo 100.0 8.2E-39 1.8E-43 366.8 26.2 218 1261-1487 4-237 (251)
233 cd03218 ABC_YhbG The ABC trans 100.0 3E-39 6.6E-44 366.1 22.3 212 1262-1486 1-223 (232)
234 COG3842 PotA ABC-type spermidi 100.0 2E-39 4.4E-44 375.7 21.2 217 1260-1491 4-232 (352)
235 PRK14261 phosphate ABC transpo 100.0 6.7E-39 1.5E-43 367.9 25.2 224 1261-1493 6-245 (253)
236 PRK14243 phosphate transporter 100.0 8E-39 1.7E-43 369.1 25.8 219 1261-1488 10-251 (264)
237 cd03225 ABC_cobalt_CbiO_domain 100.0 2E-39 4.4E-44 362.2 20.2 200 1263-1473 1-211 (211)
238 cd03292 ABC_FtsE_transporter F 100.0 2.7E-39 5.8E-44 362.0 21.2 201 1262-1474 1-214 (214)
239 cd03252 ABCC_Hemolysin The ABC 100.0 7.2E-39 1.6E-43 364.2 25.0 220 632-853 1-234 (237)
240 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.6E-39 5.6E-44 363.6 21.1 203 1262-1480 1-218 (220)
241 cd03301 ABC_MalK_N The N-termi 100.0 2.7E-39 5.9E-44 361.7 21.1 202 1262-1478 1-213 (213)
242 cd03250 ABCC_MRP_domain1 Domai 100.0 4.4E-39 9.6E-44 357.4 22.5 201 632-832 1-204 (204)
243 cd03268 ABC_BcrA_bacitracin_re 100.0 4.6E-39 1E-43 358.4 22.7 202 1262-1478 1-208 (208)
244 PRK10070 glycine betaine trans 100.0 4.4E-39 9.6E-44 386.5 24.0 209 1277-1496 42-266 (400)
245 PRK11231 fecE iron-dicitrate t 100.0 4.3E-39 9.3E-44 369.9 22.9 212 1262-1486 3-228 (255)
246 COG1116 TauB ABC-type nitrate/ 100.0 5.4E-39 1.2E-43 349.8 22.3 221 1261-1500 3-239 (248)
247 PRK13537 nodulation ABC transp 100.0 4.9E-39 1.1E-43 377.3 23.7 213 1260-1486 6-228 (306)
248 cd03300 ABC_PotA_N PotA is an 100.0 3.9E-39 8.5E-44 365.0 22.1 211 1262-1487 1-222 (232)
249 TIGR02673 FtsE cell division A 100.0 2.7E-39 5.8E-44 362.0 20.3 200 1262-1473 2-214 (214)
250 PRK14263 phosphate ABC transpo 100.0 1.1E-38 2.3E-43 367.1 25.7 219 1261-1488 8-248 (261)
251 PRK14271 phosphate ABC transpo 100.0 1.3E-38 2.9E-43 369.1 26.6 218 1261-1487 21-253 (276)
252 PRK11264 putative amino-acid A 100.0 1.4E-38 3E-43 364.9 26.4 222 1261-1495 3-244 (250)
253 PRK13649 cbiO cobalt transport 100.0 5.7E-39 1.2E-43 373.9 23.5 215 1262-1486 3-235 (280)
254 TIGR03410 urea_trans_UrtE urea 100.0 4E-39 8.6E-44 364.7 21.4 211 1262-1484 1-220 (230)
255 PRK09473 oppD oligopeptide tra 100.0 7.6E-39 1.6E-43 378.6 24.7 228 1261-1496 12-263 (330)
256 PRK13645 cbiO cobalt transport 100.0 6.6E-39 1.4E-43 374.7 23.6 218 1259-1486 4-241 (289)
257 cd03246 ABCC_Protease_Secretio 100.0 6.7E-39 1.5E-43 346.3 21.6 172 1262-1474 1-173 (173)
258 PRK14258 phosphate ABC transpo 100.0 1.2E-38 2.7E-43 367.1 25.1 221 1260-1489 6-249 (261)
259 cd03298 ABC_ThiQ_thiamine_tran 100.0 8.8E-39 1.9E-43 357.0 22.8 200 1262-1478 1-211 (211)
260 PRK13641 cbiO cobalt transport 100.0 1.1E-38 2.4E-43 372.1 24.5 215 1261-1486 2-235 (287)
261 TIGR00968 3a0106s01 sulfate AB 100.0 1.3E-38 2.8E-43 361.8 24.4 210 1262-1486 1-221 (237)
262 PRK14241 phosphate transporter 100.0 1.2E-38 2.7E-43 366.7 24.6 218 1261-1487 4-244 (258)
263 PRK14253 phosphate ABC transpo 100.0 1.6E-38 3.6E-43 364.0 25.4 218 1261-1487 3-235 (249)
264 PRK10253 iron-enterobactin tra 100.0 9.5E-39 2.1E-43 368.9 23.4 214 1260-1486 6-234 (265)
265 PRK11614 livF leucine/isoleuci 100.0 1.2E-38 2.6E-43 362.3 23.9 214 1261-1486 5-227 (237)
266 PRK10584 putative ABC transpor 100.0 1.2E-38 2.6E-43 360.2 23.5 206 1261-1477 6-227 (228)
267 PRK14264 phosphate ABC transpo 100.0 2.3E-38 5.1E-43 372.0 26.7 221 1258-1487 42-291 (305)
268 PRK11607 potG putrescine trans 100.0 1.4E-38 3.1E-43 381.3 25.1 217 1260-1491 18-245 (377)
269 PRK14265 phosphate ABC transpo 100.0 2.7E-38 5.8E-43 366.4 26.6 220 1260-1488 19-261 (274)
270 COG1125 OpuBA ABC-type proline 100.0 2.5E-39 5.4E-44 346.4 16.5 201 632-846 2-227 (309)
271 PRK13548 hmuV hemin importer A 100.0 2E-38 4.4E-43 364.5 25.3 213 1261-1486 2-231 (258)
272 PRK15112 antimicrobial peptide 100.0 1.3E-38 2.9E-43 367.8 24.0 227 1261-1498 4-253 (267)
273 cd03299 ABC_ModC_like Archeal 100.0 1.2E-38 2.6E-43 361.5 23.1 210 1262-1487 1-221 (235)
274 PRK14275 phosphate ABC transpo 100.0 1.9E-38 4E-43 369.7 25.3 222 1259-1489 37-274 (286)
275 PRK13639 cbiO cobalt transport 100.0 1.1E-38 2.3E-43 370.0 23.1 213 1262-1486 2-227 (275)
276 PRK11247 ssuB aliphatic sulfon 100.0 1.8E-38 3.9E-43 363.4 24.3 203 1261-1481 12-219 (257)
277 PRK14272 phosphate ABC transpo 100.0 1.8E-38 3.8E-43 364.4 24.3 222 1261-1491 4-242 (252)
278 PRK13638 cbiO cobalt transport 100.0 1.2E-38 2.6E-43 369.3 22.9 212 1262-1486 2-226 (271)
279 cd03235 ABC_Metallic_Cations A 100.0 6.7E-39 1.5E-43 358.5 20.0 197 1263-1478 1-213 (213)
280 PRK10771 thiQ thiamine transpo 100.0 3.4E-38 7.3E-43 357.4 25.4 208 1262-1486 2-220 (232)
281 PRK14255 phosphate ABC transpo 100.0 2.4E-38 5.3E-43 363.2 24.5 221 1261-1490 5-241 (252)
282 TIGR03415 ABC_choXWV_ATP choli 100.0 1.7E-38 3.6E-43 378.8 23.9 205 1277-1492 38-261 (382)
283 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.4E-38 3.1E-43 351.8 21.7 199 631-845 4-228 (254)
284 PRK11300 livG leucine/isoleuci 100.0 2.2E-38 4.7E-43 364.3 24.0 213 1261-1486 5-244 (255)
285 PRK10247 putative ABC transpor 100.0 1.6E-38 3.5E-43 358.1 22.3 209 1261-1481 7-223 (225)
286 PRK10908 cell division protein 100.0 3.1E-38 6.6E-43 355.4 24.5 203 1262-1476 2-217 (222)
287 PRK15093 antimicrobial peptide 100.0 3E-38 6.5E-43 374.6 25.7 228 1261-1496 3-260 (330)
288 cd03288 ABCC_SUR2 The SUR doma 100.0 4.5E-38 9.7E-43 361.6 26.3 223 629-853 17-253 (257)
289 TIGR01288 nodI ATP-binding ABC 100.0 1.8E-38 3.9E-43 373.1 23.2 212 1261-1486 4-225 (303)
290 TIGR03873 F420-0_ABC_ATP propo 100.0 2.1E-38 4.5E-43 364.4 23.0 211 1262-1485 2-226 (256)
291 cd03257 ABC_NikE_OppD_transpor 100.0 3E-38 6.5E-43 357.1 23.9 207 1262-1478 2-228 (228)
292 PRK14246 phosphate ABC transpo 100.0 3.9E-38 8.5E-43 361.6 25.0 225 1260-1493 9-249 (257)
293 PRK10895 lipopolysaccharide AB 100.0 3.7E-38 8E-43 359.3 24.5 213 1261-1486 3-227 (241)
294 COG1117 PstB ABC-type phosphat 100.0 5.8E-39 1.3E-43 336.0 16.3 205 630-845 6-238 (253)
295 TIGR01277 thiQ thiamine ABC tr 100.0 2.5E-38 5.5E-43 353.7 22.4 201 1262-1479 1-212 (213)
296 PRK11701 phnK phosphonate C-P 100.0 5.3E-38 1.2E-42 361.5 25.2 221 1261-1493 6-249 (258)
297 cd03262 ABC_HisP_GlnQ_permease 100.0 1.6E-38 3.5E-43 355.4 20.3 200 1262-1474 1-213 (213)
298 PRK10418 nikD nickel transport 100.0 7.3E-38 1.6E-42 359.4 25.7 223 1261-1496 4-242 (254)
299 PRK13536 nodulation factor exp 100.0 3E-38 6.5E-43 374.3 23.0 212 1261-1486 41-262 (340)
300 COG1127 Ttg2A ABC-type transpo 100.0 3.4E-38 7.5E-43 337.4 21.0 204 629-847 6-238 (263)
301 COG1120 FepC ABC-type cobalami 100.0 2E-38 4.3E-43 352.7 20.0 200 631-845 2-229 (258)
302 TIGR03522 GldA_ABC_ATP gliding 100.0 4.2E-38 9.2E-43 369.4 23.9 211 1262-1486 3-222 (301)
303 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 6.7E-38 1.5E-42 356.5 24.7 219 632-851 1-233 (238)
304 cd03269 ABC_putative_ATPase Th 100.0 2.6E-38 5.6E-43 352.9 20.6 200 1262-1478 1-210 (210)
305 cd03251 ABCC_MsbA MsbA is an e 100.0 8.1E-38 1.8E-42 355.0 25.0 217 632-850 1-231 (234)
306 cd03254 ABCC_Glucan_exporter_l 100.0 7.5E-38 1.6E-42 354.0 24.6 212 631-845 2-227 (229)
307 cd03253 ABCC_ATM1_transporter 100.0 8.6E-38 1.9E-42 355.2 25.2 218 632-852 1-232 (236)
308 TIGR01978 sufC FeS assembly AT 100.0 4E-38 8.6E-43 359.6 22.0 212 1262-1484 1-233 (243)
309 PRK11144 modC molybdate transp 100.0 6.6E-38 1.4E-42 374.5 24.6 211 1262-1488 2-221 (352)
310 TIGR01188 drrA daunorubicin re 100.0 3.8E-38 8.2E-43 370.2 21.8 203 1270-1486 2-214 (302)
311 PRK13547 hmuV hemin importer A 100.0 8.1E-38 1.8E-42 361.0 24.1 212 1262-1486 2-245 (272)
312 COG1118 CysA ABC-type sulfate/ 100.0 3E-38 6.6E-43 347.6 18.2 216 1261-1491 2-233 (345)
313 COG3839 MalK ABC-type sugar tr 100.0 3.9E-38 8.5E-43 363.2 20.1 201 631-846 3-225 (338)
314 cd03244 ABCC_MRP_domain2 Domai 100.0 1.5E-37 3.2E-42 349.7 24.1 206 631-838 2-220 (221)
315 PRK09984 phosphonate/organopho 100.0 1.4E-37 3.1E-42 358.8 24.5 221 1261-1497 4-251 (262)
316 COG1131 CcmA ABC-type multidru 100.0 8.1E-38 1.8E-42 363.5 21.9 213 1261-1486 4-227 (293)
317 TIGR02982 heterocyst_DevA ABC 100.0 8.7E-38 1.9E-42 351.1 20.6 202 1262-1474 2-219 (220)
318 PRK11248 tauB taurine transpor 100.0 1.7E-37 3.6E-42 355.9 22.9 201 1262-1480 2-215 (255)
319 COG1118 CysA ABC-type sulfate/ 100.0 4.4E-38 9.6E-43 346.3 16.6 201 631-846 2-229 (345)
320 TIGR02142 modC_ABC molybdenum 100.0 1.9E-37 4.1E-42 371.2 23.1 211 1266-1491 4-227 (354)
321 PRK10419 nikE nickel transport 100.0 3.7E-37 8E-42 355.9 24.7 221 1261-1492 3-247 (268)
322 TIGR03740 galliderm_ABC gallid 100.0 2.9E-37 6.3E-42 347.7 23.3 204 1262-1482 1-210 (223)
323 cd03228 ABCC_MRP_Like The MRP 100.0 2.4E-37 5.1E-42 333.6 21.2 171 1262-1473 1-171 (171)
324 COG3842 PotA ABC-type spermidi 100.0 7.8E-38 1.7E-42 362.6 18.5 203 630-846 4-228 (352)
325 PRK00349 uvrA excinuclease ABC 100.0 1.4E-36 3.1E-41 394.0 31.8 231 1261-1498 614-940 (943)
326 COG0410 LivF ABC-type branched 100.0 3E-37 6.6E-42 330.3 20.8 220 1261-1487 3-228 (237)
327 COG3840 ThiQ ABC-type thiamine 100.0 1.3E-37 2.8E-42 317.2 17.1 198 632-846 2-221 (231)
328 COG0444 DppD ABC-type dipeptid 100.0 4.3E-37 9.3E-42 345.9 22.6 232 1262-1501 2-260 (316)
329 cd03245 ABCC_bacteriocin_expor 100.0 6E-37 1.3E-41 344.5 24.0 205 631-837 2-220 (220)
330 COG4178 ABC-type uncharacteriz 100.0 6.2E-34 1.3E-38 346.3 51.7 443 376-829 106-587 (604)
331 cd03230 ABC_DR_subfamily_A Thi 100.0 3.3E-37 7.1E-42 333.2 20.7 170 1262-1474 1-173 (173)
332 PRK09544 znuC high-affinity zi 100.0 7.5E-37 1.6E-41 349.3 24.7 208 1261-1495 4-217 (251)
333 cd03229 ABC_Class3 This class 100.0 3.8E-37 8.1E-42 334.3 21.2 172 1262-1473 1-178 (178)
334 COG1136 SalX ABC-type antimicr 100.0 3.6E-37 7.8E-42 336.3 20.9 192 632-834 2-221 (226)
335 TIGR02323 CP_lyasePhnK phospho 100.0 8.6E-37 1.9E-41 350.6 25.0 221 1261-1493 3-246 (253)
336 COG1122 CbiO ABC-type cobalt t 100.0 2.2E-37 4.7E-42 345.2 19.3 201 631-845 3-229 (235)
337 COG4615 PvdE ABC-type sideroph 100.0 4E-34 8.7E-39 320.8 44.6 505 305-836 4-529 (546)
338 cd03217 ABC_FeS_Assembly ABC-t 100.0 7E-37 1.5E-41 338.4 22.2 185 1262-1484 1-192 (200)
339 cd03234 ABCG_White The White s 100.0 3E-37 6.4E-42 348.3 18.9 203 1262-1478 4-226 (226)
340 PRK15056 manganese/iron transp 100.0 9.5E-37 2.1E-41 353.4 23.5 208 1261-1485 6-230 (272)
341 cd03233 ABC_PDR_domain1 The pl 100.0 6.6E-37 1.4E-41 339.0 20.9 190 1261-1478 3-202 (202)
342 PRK13631 cbiO cobalt transport 100.0 1.2E-36 2.5E-41 358.5 24.2 209 629-845 19-266 (320)
343 cd03297 ABC_ModC_molybdenum_tr 100.0 6.7E-37 1.5E-41 342.5 20.9 200 1262-1478 2-214 (214)
344 cd03213 ABCG_EPDR ABCG transpo 100.0 6.1E-37 1.3E-41 337.1 20.1 182 1261-1478 3-194 (194)
345 COG4555 NatA ABC-type Na+ tran 100.0 4.4E-37 9.5E-42 318.8 17.1 212 1262-1486 2-223 (245)
346 PRK11650 ugpC glycerol-3-phosp 100.0 9.2E-37 2E-41 363.8 22.3 202 631-846 3-226 (356)
347 cd03215 ABC_Carb_Monos_II This 100.0 6.7E-37 1.4E-41 333.5 19.2 172 1261-1474 4-182 (182)
348 TIGR02314 ABC_MetN D-methionin 100.0 6.3E-37 1.4E-41 362.2 20.5 202 632-845 2-231 (343)
349 CHL00131 ycf16 sulfate ABC tra 100.0 1.8E-36 3.9E-41 347.8 22.9 212 1261-1483 7-239 (252)
350 cd03223 ABCD_peroxisomal_ALDP 100.0 1.5E-36 3.3E-41 325.4 20.6 164 1262-1473 1-164 (166)
351 cd03290 ABCC_SUR1_N The SUR do 100.0 2E-36 4.3E-41 339.8 22.3 198 633-832 2-218 (218)
352 cd03232 ABC_PDR_domain2 The pl 100.0 9.2E-37 2E-41 335.3 19.1 181 1261-1478 3-192 (192)
353 TIGR01186 proV glycine betaine 100.0 5.8E-37 1.3E-41 364.2 18.8 192 647-846 6-221 (363)
354 TIGR03608 L_ocin_972_ABC putat 100.0 8.2E-37 1.8E-41 339.9 18.7 193 1264-1469 1-206 (206)
355 TIGR02770 nickel_nikD nickel i 100.0 1.7E-36 3.7E-41 343.0 21.4 206 1278-1493 1-223 (230)
356 cd03214 ABC_Iron-Siderophores_ 100.0 1.4E-36 3.1E-41 330.3 19.9 177 1263-1478 1-180 (180)
357 cd03261 ABC_Org_Solvent_Resist 100.0 1.3E-36 2.9E-41 345.1 20.1 199 632-845 1-227 (235)
358 COG1137 YhbG ABC-type (unclass 100.0 2.2E-37 4.8E-42 320.6 10.4 215 1260-1487 3-230 (243)
359 PRK13643 cbiO cobalt transport 100.0 3.6E-36 7.7E-41 350.9 21.7 203 632-845 2-234 (288)
360 COG3638 ABC-type phosphate/pho 100.0 1.1E-36 2.3E-41 325.1 15.7 203 631-844 3-237 (258)
361 PRK13637 cbiO cobalt transport 100.0 3.7E-36 8.1E-41 350.6 21.3 205 631-845 2-235 (287)
362 PRK11432 fbpC ferric transport 100.0 3.9E-36 8.4E-41 357.4 21.7 201 631-846 6-228 (351)
363 PRK13650 cbiO cobalt transport 100.0 5.2E-36 1.1E-40 348.2 22.2 203 631-845 4-230 (279)
364 COG1123 ATPase components of v 100.0 5.8E-36 1.2E-40 359.8 23.1 227 1261-1496 5-255 (539)
365 PRK13634 cbiO cobalt transport 100.0 4.2E-36 9.1E-41 350.7 21.4 203 632-845 3-236 (290)
366 PRK03695 vitamin B12-transport 100.0 6.6E-36 1.4E-40 341.7 22.3 207 1262-1486 1-223 (248)
367 cd03248 ABCC_TAP TAP, the Tran 100.0 7.4E-36 1.6E-40 337.1 22.3 205 628-833 8-226 (226)
368 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.2E-35 2.6E-40 330.7 23.2 189 630-838 5-206 (207)
369 PRK09580 sufC cysteine desulfu 100.0 5.9E-36 1.3E-40 342.7 21.2 211 1262-1483 2-233 (248)
370 cd03260 ABC_PstB_phosphate_tra 100.0 3.6E-36 7.9E-41 339.8 18.8 195 632-841 1-226 (227)
371 COG1124 DppF ABC-type dipeptid 100.0 3.9E-36 8.5E-41 323.8 18.0 204 631-845 3-232 (252)
372 cd03231 ABC_CcmA_heme_exporter 100.0 1.1E-35 2.4E-40 329.2 21.8 194 1262-1469 1-198 (201)
373 cd03296 ABC_CysA_sulfate_impor 100.0 9E-36 2E-40 339.1 21.6 199 632-845 3-227 (239)
374 PRK14269 phosphate ABC transpo 100.0 7.8E-36 1.7E-40 341.0 20.7 204 631-845 2-231 (246)
375 PRK09452 potA putrescine/sperm 100.0 1E-35 2.2E-40 356.0 22.3 202 630-846 13-236 (375)
376 cd03216 ABC_Carb_Monos_I This 100.0 1.8E-35 4E-40 316.1 21.7 159 1262-1476 1-162 (163)
377 PRK14242 phosphate transporter 100.0 1E-35 2.2E-40 341.8 21.0 205 630-845 5-238 (253)
378 PRK13651 cobalt transporter AT 100.0 1.4E-35 3E-40 347.5 22.1 204 631-845 2-255 (305)
379 PRK13647 cbiO cobalt transport 100.0 1E-35 2.2E-40 344.8 20.7 198 631-842 4-225 (274)
380 PRK13646 cbiO cobalt transport 100.0 1.9E-35 4E-40 344.7 23.0 207 631-845 2-236 (286)
381 TIGR03265 PhnT2 putative 2-ami 100.0 8.7E-36 1.9E-40 355.1 20.5 201 631-846 4-226 (353)
382 cd03219 ABC_Mj1267_LivG_branch 100.0 1E-35 2.2E-40 338.2 20.2 206 632-844 1-232 (236)
383 PRK09700 D-allose transporter 100.0 1.1E-35 2.4E-40 374.7 22.3 212 1261-1485 5-234 (510)
384 PRK11000 maltose/maltodextrin 100.0 1.1E-35 2.4E-40 357.0 21.2 200 631-845 3-224 (369)
385 PRK14273 phosphate ABC transpo 100.0 2E-35 4.4E-40 339.4 22.5 205 630-845 6-239 (254)
386 TIGR01184 ntrCD nitrate transp 100.0 1.1E-35 2.4E-40 336.1 20.0 190 1279-1484 1-203 (230)
387 TIGR03258 PhnT 2-aminoethylpho 100.0 9.7E-36 2.1E-40 355.0 20.4 202 630-846 4-230 (362)
388 cd03259 ABC_Carb_Solutes_like 100.0 9.1E-36 2E-40 333.2 18.9 191 632-837 1-213 (213)
389 PRK10851 sulfate/thiosulfate t 100.0 1.5E-35 3.2E-40 353.1 21.6 201 631-846 2-228 (353)
390 TIGR00960 3a0501s02 Type II (G 100.0 7.8E-36 1.7E-40 334.5 18.1 189 632-833 2-216 (216)
391 TIGR00972 3a0107s01c2 phosphat 100.0 1.7E-35 3.7E-40 338.6 21.2 203 632-845 2-233 (247)
392 cd03226 ABC_cobalt_CbiO_domain 100.0 8.8E-36 1.9E-40 331.3 18.3 188 633-834 1-205 (205)
393 cd03293 ABC_NrtD_SsuB_transpor 100.0 1.1E-35 2.3E-40 334.3 19.2 196 632-839 1-218 (220)
394 PRK10762 D-ribose transporter 100.0 1.8E-35 4E-40 371.7 23.3 212 1261-1485 4-230 (501)
395 PRK10261 glutathione transport 100.0 1.3E-35 2.8E-40 380.5 22.3 223 1261-1491 12-264 (623)
396 TIGR02315 ABC_phnC phosphonate 100.0 2E-35 4.3E-40 337.3 21.4 197 632-842 2-233 (243)
397 PRK13549 xylose transporter AT 100.0 2E-35 4.3E-40 371.8 23.4 212 1261-1485 5-232 (506)
398 PRK15439 autoinducer 2 ABC tra 100.0 3.7E-35 8E-40 369.2 25.8 213 1261-1486 11-230 (510)
399 PRK14250 phosphate ABC transpo 100.0 2.9E-35 6.3E-40 335.2 22.5 201 631-845 3-222 (241)
400 PRK13538 cytochrome c biogenes 100.0 2E-35 4.3E-40 328.0 20.6 194 1262-1469 2-202 (204)
401 cd03263 ABC_subfamily_A The AB 100.0 1.7E-35 3.7E-40 332.7 20.2 198 632-842 1-219 (220)
402 cd03265 ABC_DrrA DrrA is the A 100.0 1.5E-35 3.2E-40 333.2 19.0 196 632-842 1-219 (220)
403 cd03267 ABC_NatA_like Similar 100.0 2.1E-35 4.6E-40 335.1 20.4 191 1276-1478 34-236 (236)
404 PRK13635 cbiO cobalt transport 100.0 3.3E-35 7.2E-40 341.2 22.4 202 631-845 5-230 (279)
405 COG0411 LivG ABC-type branched 100.0 5.4E-36 1.2E-40 323.1 14.6 213 1262-1487 5-241 (250)
406 COG4175 ProV ABC-type proline/ 100.0 2.1E-35 4.5E-40 324.8 19.4 225 1261-1496 4-266 (386)
407 PRK10744 pstB phosphate transp 100.0 3.4E-35 7.4E-40 338.4 22.2 206 629-845 11-245 (260)
408 PRK11153 metN DL-methionine tr 100.0 2.6E-35 5.6E-40 351.1 21.9 206 632-845 2-231 (343)
409 cd03256 ABC_PhnC_transporter A 100.0 2.2E-35 4.9E-40 336.5 20.5 201 632-843 1-233 (241)
410 COG4619 ABC-type uncharacteriz 100.0 1.3E-35 2.9E-40 298.4 16.2 197 1270-1476 10-214 (223)
411 cd03247 ABCC_cytochrome_bd The 100.0 3.2E-35 6.9E-40 319.3 20.4 166 632-837 1-178 (178)
412 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.6E-35 3.6E-40 332.4 18.6 190 632-833 1-218 (218)
413 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 4.8E-35 1E-39 332.6 22.5 203 632-845 2-222 (236)
414 COG4608 AppF ABC-type oligopep 100.0 2.8E-35 6.1E-40 324.9 19.8 196 1261-1496 4-210 (268)
415 PRK10938 putative molybdenum t 100.0 3.7E-35 7.9E-40 368.4 23.4 212 1261-1486 3-225 (490)
416 cd03224 ABC_TM1139_LivF_branch 100.0 2.8E-35 6.1E-40 331.4 20.0 202 632-843 1-220 (222)
417 TIGR01257 rim_protein retinal- 100.0 6.8E-33 1.5E-37 377.4 46.7 216 1260-1487 927-1151(2272)
418 cd03294 ABC_Pro_Gly_Bertaine T 100.0 1.7E-35 3.8E-40 342.1 18.4 197 634-845 27-251 (269)
419 PRK15134 microcin C ABC transp 100.0 7.1E-35 1.5E-39 368.7 25.6 219 1261-1487 5-248 (529)
420 cd03268 ABC_BcrA_bacitracin_re 100.0 4E-35 8.7E-40 326.8 20.5 191 632-837 1-208 (208)
421 cd03218 ABC_YhbG The ABC trans 100.0 4.1E-35 9E-40 332.3 20.7 202 632-844 1-222 (232)
422 PRK14274 phosphate ABC transpo 100.0 4.7E-35 1E-39 337.2 21.3 204 631-845 12-244 (259)
423 PRK13540 cytochrome c biogenes 100.0 4.7E-35 1E-39 324.0 20.5 193 1262-1468 2-198 (200)
424 PRK13543 cytochrome c biogenes 100.0 6E-35 1.3E-39 326.6 21.4 195 1261-1471 11-212 (214)
425 PRK13644 cbiO cobalt transport 100.0 5.8E-35 1.3E-39 338.5 22.0 200 632-845 2-225 (274)
426 PRK11607 potG putrescine trans 100.0 4E-35 8.7E-40 351.6 21.1 202 630-846 18-241 (377)
427 PRK14235 phosphate transporter 100.0 5.2E-35 1.1E-39 338.0 21.3 205 629-844 17-251 (267)
428 cd03266 ABC_NatA_sodium_export 100.0 4E-35 8.8E-40 329.2 19.8 194 632-837 2-218 (218)
429 PRK11288 araG L-arabinose tran 100.0 5.6E-35 1.2E-39 367.3 23.3 207 1261-1480 4-224 (501)
430 PRK13641 cbiO cobalt transport 100.0 6.1E-35 1.3E-39 340.6 21.8 203 631-844 2-234 (287)
431 TIGR00630 uvra excinuclease AB 100.0 2.8E-34 6.1E-39 372.0 30.2 216 1261-1483 612-923 (924)
432 PRK13537 nodulation ABC transp 100.0 5E-35 1.1E-39 343.5 21.2 201 630-845 6-228 (306)
433 PRK13645 cbiO cobalt transport 100.0 5.2E-35 1.1E-39 341.9 21.2 208 630-845 5-241 (289)
434 PRK14237 phosphate transporter 100.0 7E-35 1.5E-39 336.9 22.0 206 629-845 18-252 (267)
435 COG2884 FtsE Predicted ATPase 100.0 2.4E-35 5.2E-40 303.7 16.0 192 632-837 2-219 (223)
436 PRK13636 cbiO cobalt transport 100.0 5.8E-35 1.2E-39 340.1 21.4 201 631-845 5-232 (283)
437 cd03258 ABC_MetN_methionine_tr 100.0 6E-35 1.3E-39 331.2 21.0 201 632-844 2-230 (233)
438 cd03235 ABC_Metallic_Cations A 100.0 3.8E-35 8.3E-40 328.2 19.0 188 634-837 2-213 (213)
439 cd03295 ABC_OpuCA_Osmoprotecti 100.0 4.6E-35 1E-39 333.9 20.0 204 632-845 1-226 (242)
440 PRK00635 excinuclease ABC subu 100.0 8.1E-34 1.8E-38 380.6 35.0 211 1261-1486 600-907 (1809)
441 cd03301 ABC_MalK_N The N-termi 100.0 3.8E-35 8.2E-40 328.2 18.7 191 632-837 1-213 (213)
442 PRK13640 cbiO cobalt transport 100.0 8.7E-35 1.9E-39 338.4 22.4 203 630-845 4-233 (282)
443 PRK14239 phosphate transporter 100.0 5.6E-35 1.2E-39 335.5 20.4 204 631-845 5-237 (252)
444 PRK11629 lolD lipoprotein tran 100.0 1E-34 2.2E-39 329.2 22.3 196 631-838 5-228 (233)
445 PRK13649 cbiO cobalt transport 100.0 6E-35 1.3E-39 340.1 20.9 204 631-845 2-235 (280)
446 PRK11247 ssuB aliphatic sulfon 100.0 8.6E-35 1.9E-39 333.1 21.8 196 630-840 11-219 (257)
447 PRK14245 phosphate ABC transpo 100.0 5E-35 1.1E-39 335.3 19.9 204 631-845 3-235 (250)
448 PRK14251 phosphate ABC transpo 100.0 4.6E-35 1E-39 335.9 19.5 204 631-845 4-236 (251)
449 PRK14259 phosphate ABC transpo 100.0 1E-34 2.2E-39 335.8 22.4 206 629-845 11-254 (269)
450 TIGR02324 CP_lyasePhnL phospho 100.0 8.2E-35 1.8E-39 328.1 21.0 198 1262-1469 2-222 (224)
451 PRK13632 cbiO cobalt transport 100.0 1E-34 2.2E-39 336.3 22.2 203 630-845 6-232 (271)
452 cd03264 ABC_drug_resistance_li 100.0 5E-35 1.1E-39 326.7 18.9 190 632-837 1-211 (211)
453 PRK13642 cbiO cobalt transport 100.0 1E-34 2.3E-39 337.1 22.2 203 631-845 4-230 (277)
454 PLN03211 ABC transporter G-25; 100.0 1.4E-34 3E-39 370.1 25.4 199 1276-1485 81-296 (659)
455 PRK14268 phosphate ABC transpo 100.0 7.8E-35 1.7E-39 335.1 20.9 205 630-845 11-243 (258)
456 PRK09493 glnQ glutamine ABC tr 100.0 8.9E-35 1.9E-39 331.2 21.0 203 632-845 2-226 (240)
457 PRK13539 cytochrome c biogenes 100.0 1.2E-34 2.6E-39 322.5 21.5 194 1261-1471 2-200 (207)
458 PRK14240 phosphate transporter 100.0 1.1E-34 2.3E-39 332.7 21.7 203 631-844 3-234 (250)
459 PRK10982 galactose/methyl gala 100.0 8E-35 1.7E-39 365.3 22.5 208 1264-1484 1-222 (491)
460 TIGR02211 LolD_lipo_ex lipopro 100.0 9.6E-35 2.1E-39 326.8 20.7 191 632-834 2-220 (221)
461 PRK14249 phosphate ABC transpo 100.0 1.3E-34 2.8E-39 332.1 22.1 204 631-845 4-236 (251)
462 PRK14248 phosphate ABC transpo 100.0 1.2E-34 2.5E-39 335.5 21.8 205 630-845 20-253 (268)
463 TIGR01288 nodI ATP-binding ABC 100.0 1E-34 2.2E-39 341.4 21.6 201 630-845 3-225 (303)
464 PRK13633 cobalt transporter AT 100.0 1.5E-34 3.2E-39 336.3 22.6 203 631-845 4-234 (280)
465 PRK14243 phosphate transporter 100.0 1.3E-34 2.8E-39 334.2 21.8 204 631-845 10-249 (264)
466 cd03223 ABCD_peroxisomal_ALDP 100.0 1.2E-34 2.6E-39 310.8 20.0 162 632-832 1-164 (166)
467 TIGR03411 urea_trans_UrtD urea 100.0 1.4E-34 3E-39 330.2 21.5 207 632-844 3-231 (242)
468 TIGR01189 ccmA heme ABC export 100.0 8.7E-35 1.9E-39 321.4 19.2 192 1262-1468 1-197 (198)
469 PRK10619 histidine/lysine/argi 100.0 1E-34 2.2E-39 334.1 20.3 204 630-845 4-242 (257)
470 PRK14236 phosphate transporter 100.0 1.5E-34 3.3E-39 335.0 21.9 206 629-845 23-257 (272)
471 TIGR02633 xylG D-xylose ABC tr 100.0 1.4E-34 3.1E-39 363.9 23.4 211 1262-1484 2-229 (500)
472 PRK11264 putative amino-acid A 100.0 2.1E-34 4.5E-39 330.3 22.7 203 632-845 4-234 (250)
473 TIGR03410 urea_trans_UrtE urea 100.0 7.7E-35 1.7E-39 329.7 18.7 197 632-842 1-219 (230)
474 COG1245 Predicted ATPase, RNas 100.0 6.4E-34 1.4E-38 324.8 26.0 176 1285-1485 363-547 (591)
475 PRK14238 phosphate transporter 100.0 1.4E-34 3E-39 335.0 21.1 205 630-845 23-256 (271)
476 PRK10575 iron-hydroxamate tran 100.0 1.6E-34 3.4E-39 333.7 21.4 201 629-844 9-237 (265)
477 COG4598 HisP ABC-type histidin 100.0 4.6E-35 9.9E-40 296.9 14.7 217 1261-1490 6-246 (256)
478 PRK09536 btuD corrinoid ABC tr 100.0 1.2E-34 2.6E-39 348.5 21.1 200 631-845 3-229 (402)
479 PRK11831 putative ABC transpor 100.0 1.3E-34 2.8E-39 335.1 20.6 201 630-845 6-234 (269)
480 PRK11614 livF leucine/isoleuci 100.0 2.6E-34 5.6E-39 326.8 22.6 203 631-844 5-226 (237)
481 cd03269 ABC_putative_ATPase Th 100.0 9.7E-35 2.1E-39 324.2 18.8 191 632-837 1-210 (210)
482 cd03292 ABC_FtsE_transporter F 100.0 8.1E-35 1.8E-39 325.8 18.1 188 632-833 1-214 (214)
483 PRK10584 putative ABC transpor 100.0 1.6E-34 3.5E-39 326.5 20.6 194 631-836 6-227 (228)
484 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.6E-34 3.5E-39 322.6 20.3 189 632-837 1-211 (211)
485 PRK13652 cbiO cobalt transport 100.0 2.4E-34 5.2E-39 334.0 22.4 201 631-845 3-228 (277)
486 PRK10535 macrolide transporter 100.0 1.8E-34 4E-39 371.1 23.5 213 1261-1484 4-231 (648)
487 PRK11231 fecE iron-dicitrate t 100.0 1.9E-34 4.2E-39 331.4 21.2 198 632-844 3-227 (255)
488 cd03257 ABC_NikE_OppD_transpor 100.0 1.5E-34 3.2E-39 327.0 20.0 202 632-837 2-228 (228)
489 PRK14244 phosphate ABC transpo 100.0 1.1E-34 2.3E-39 332.8 19.0 204 631-845 5-238 (251)
490 PRK14271 phosphate ABC transpo 100.0 1.8E-34 4E-39 334.5 21.2 205 630-845 20-252 (276)
491 PRK13648 cbiO cobalt transport 100.0 2.4E-34 5.2E-39 333.0 22.1 206 631-845 7-232 (269)
492 PRK11124 artP arginine transpo 100.0 2E-34 4.3E-39 328.8 21.1 203 631-844 2-230 (242)
493 PRK10247 putative ABC transpor 100.0 1.4E-34 3E-39 326.2 19.5 197 630-840 6-223 (225)
494 PRK14247 phosphate ABC transpo 100.0 1.9E-34 4.2E-39 330.6 21.1 204 631-845 3-235 (250)
495 PRK14267 phosphate ABC transpo 100.0 2E-34 4.4E-39 331.0 21.1 204 631-845 4-238 (253)
496 PRK14253 phosphate ABC transpo 100.0 1.7E-34 3.8E-39 330.7 20.5 203 631-844 3-233 (249)
497 PRK13536 nodulation factor exp 100.0 1.9E-34 4.1E-39 341.9 21.4 206 629-845 39-262 (340)
498 PRK10895 lipopolysaccharide AB 100.0 1.9E-34 4.2E-39 328.7 20.6 203 631-844 3-226 (241)
499 PRK14270 phosphate ABC transpo 100.0 2.4E-34 5.3E-39 329.8 21.4 204 631-845 4-236 (251)
500 PRK10070 glycine betaine trans 100.0 1.3E-34 2.7E-39 348.0 19.8 186 648-845 42-255 (400)
No 1
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.3e-273 Score=2606.63 Aligned_cols=1255 Identities=47% Similarity=0.775 Sum_probs=1164.2
Q ss_pred CCCCCCCCh--hHHHHHHhHHHHHHhhccCCCCCCCCCCCCccCcHHHHHHHHHHhHHHHHhhcCCCCchhHHHHHHHHH
Q 000432 236 DSPYGKSTL--LQLVTFSWLNPLFAVGIKKPLELDDIPDVDIKDSAEFLSNRFEQDLDLVKEKEGSTNPSIYKAIFFFIR 313 (1513)
Q Consensus 236 ~~p~~~a~~--~s~~~f~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~~~~~~~~~~l~~~l~~~~~ 313 (1513)
++|.+.++. +|++||||++|++++|||++|+.+|+|+++++|+++.++++|++.|+++.++.+ ++|+++++++++||
T Consensus 122 ~~~~~~~~~~~~S~~~f~W~~~l~~~g~k~~L~~~Dl~~l~~~d~s~~l~~~~~~~w~~~~~~~~-~~psl~~al~~~f~ 200 (1381)
T KOG0054|consen 122 PNPLPEASAGFLSRLTFSWMTPLLRKGYKKPLELKDLWSLSPEDSSETLVKRLESLWEKELGRSG-KKPSLLRALLRTFG 200 (1381)
T ss_pred CCcccccchhHHHHHHHHHHHHHHHhhccCCCChhhcccCChhhhhhHHHHHHHHHHHHHhcccc-CCcHHHHHHHHHHH
Confidence 445555555 999999999999999999999999999999999999999999999999875543 67899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 314 KKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQLGLRLRAALIS 393 (1513)
Q Consensus 314 ~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~ 393 (1513)
+++++.+++.++.+.+.+++|.+++.+++++++++... +.||+++++++++.++++++.++|++..+++|+|+|+++.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~P~lL~~li~~~~~~~~~~-~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~ 279 (1381)
T KOG0054|consen 201 RTFLLSGIFLFLRDLAGFVGPLLLKKLILFFSEKRLPL-NNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALIS 279 (1381)
T ss_pred HHHHHHHHHHHHHHHHccccHHHHHHHHHHhcCCCccc-chhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHH
Confidence 99999999999999999999999999999998874443 78999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 394 HLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFYSNYMFMLPVQISLAIYILRTNLGLGSLAALAATLTVMTCNI 473 (1513)
Q Consensus 394 ~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~~~l~~L~~~lg~~~l~~l~~~~~~~~~~~ 473 (1513)
+||+|+|++++.+++++++|+|+|+|++|++|+.+++.++|.+|..|+|+++++++||..+|+++++|++++++++|+|.
T Consensus 280 ~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~~h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~ 359 (1381)
T KOG0054|consen 280 AIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACFLHLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNS 359 (1381)
T ss_pred HHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 474 PITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSAFIFWGSPTFIS 553 (1513)
Q Consensus 474 ~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~~~~~~~p~~v~ 553 (1513)
+++++++++|++.|+.+|+|++.|+|+|+|||+||+||||+.|.++|++.|++|+++++|..+..+++.+.++++|.+++
T Consensus 360 ~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~ 439 (1381)
T KOG0054|consen 360 FLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVS 439 (1381)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHH-HhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCCCCcceE
Q 000432 554 VVTFGACM-LLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAVEYVPKGRSEFEV 632 (1513)
Q Consensus 554 ~~~f~~~~-~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~I 632 (1513)
+++|++|. ..++.+|+.++|+++++|++|+.|+.++|+.++.+.|++||++|+++||..+|.+++..+..+..+.+.+|
T Consensus 440 ~~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~~~~~~~~~~i 519 (1381)
T KOG0054|consen 440 VVTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPDSVERSPDEAGENAI 519 (1381)
T ss_pred HHHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccccccCCCCCCCceE
Confidence 99999999 77899999999999999999999999999999999999999999999999999887766543444566789
Q ss_pred EEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCeEEEEcCCCcccCccHH
Q 000432 633 EVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGTKAYVPQSPWILTGNIR 712 (1513)
Q Consensus 633 ~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~~ayv~Q~~~l~~~ti~ 712 (1513)
+++|++|+|+++++.|+|+||||+|++|+++||||++||||||||++|+||+++.+|+|.++|.+|||||+|||||||||
T Consensus 520 ~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~gsiaYv~Q~pWI~ngTvr 599 (1381)
T KOG0054|consen 520 EIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNGSVAYVPQQPWIQNGTVR 599 (1381)
T ss_pred EEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcCeEEEeccccHhhCCcHH
Confidence 99999999998666779999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHH
Q 000432 713 ENILFGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTG 792 (1513)
Q Consensus 713 eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~illLDep~salD~~~~ 792 (1513)
|||+||+|||++||++|+++|+|.+|++.||+||+|+|||||+||||||||||+||||+|+|+||||||||+||||+||+
T Consensus 600 eNILFG~~~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg 679 (1381)
T KOG0054|consen 600 ENILFGSPYDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVG 679 (1381)
T ss_pred HhhhcCccccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHHHHHHhhhhhhhhhcccccCCCC
Q 000432 793 TQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQNIGFEVLVGAHSQALESVLTVETSSRT 872 (1513)
Q Consensus 793 ~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 872 (1513)
+|||++|+++.+++||||+|||++++|++||+|++|+||+|.++|+|+|+++.+..|.++..+.. .+..+..+. ..
T Consensus 680 ~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~~~~~~~l~~~~~--~~~~~~~~~--~~ 755 (1381)
T KOG0054|consen 680 KHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKSGGDFAELAHEEE--SEQEEEASE--KD 755 (1381)
T ss_pred HHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhcchhHHHHhhccc--hhhcccccc--cc
Confidence 99999999999999999999999999999999999999999999999999999999998843221 111110000 00
Q ss_pred CCCCCCCCccCcCccccccccccCCCccchhhhhhhhcCCCchhhhHhhhcccchHHHHHHHHhhhhhhHHHHHHHHHHH
Q 000432 873 SQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITEKGGKLVQEEEREKGSIGKEVYWSYLTAVKGGALVPIILLAQSS 952 (1513)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~~~~y~~~~~~~~~~~~~~l~~~~ 952 (1513)
.+... .... .+. +... ..+..+.+. .+.+....++.++|+++.|.++|++|+.|+++.+|+..+++++++.++
T Consensus 756 ~~~~~--~~~~-~~~-~~~~-~~~~~~~~~--~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a~~g~~~~~~~~~~~v~ 828 (1381)
T KOG0054|consen 756 LESGE--SSRE-SES-RSLE-SLSSEEEKS--KDEKEEEDKLVQEEERETGKVSWSVYKKYIKAAGGFLLVLLILLLFVL 828 (1381)
T ss_pred ccccc--cccc-hhh-hhhh-hhccccccc--ccccchhhHHHHHHHHhcCEeeHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 00000 0000 000 0000 000000000 011122456778899999999999999999987777777777889999
Q ss_pred HHHHHHhhhhhhcccCCCCCCCCCC-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCccc
Q 000432 953 FQVLQVASNYWMAWASPPTSDGEPA-LGMNIVLLVYTLLTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAF 1031 (1513)
Q Consensus 953 ~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~f 1031 (1513)
.++++++++||++||.+........ .+...|+++|+++++++.++.+++++.+..+++++|++||++|+++++|+||+|
T Consensus 829 ~~~~~~~~~~WLs~W~~~~~~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~F 908 (1381)
T KOG0054|consen 829 TQVLQIASNYWLSYWTDDGEDNGTTTVSTSFYLGVYALLGVASSLLTLLRSFLFAKGGLKASRKLHDKLLNSILRAPMSF 908 (1381)
T ss_pred HHHHHHHHHHHHHHhcCCcccccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchh
Confidence 9999999999999666553221111 456789999999999999999999999999999999999999999999999999
Q ss_pred ccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1032 FDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVIFIPVTGICIWYQQYYIPTARELARL 1111 (1513)
Q Consensus 1032 Fd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~~~r~l~rl 1111 (1513)
||+||+|||+||||+|++.+|..+|..+..++.++++++++++++++++|+++++++|+.++++++++||.+++||++|+
T Consensus 909 FdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRL 988 (1381)
T KOG0054|consen 909 FDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRL 988 (1381)
T ss_pred cCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000432 1112 AEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLVVLVTLPE 1191 (1513)
Q Consensus 1112 ~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~ 1191 (1513)
++.+|||+++||+||+.|+.|||||++|++|.+++.+++|.+++++|....++||+++|+|+++++++.+++++++..+.
T Consensus 989 esitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~ 1068 (1381)
T KOG0054|consen 989 ESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLIAALFAVLLPS 1068 (1381)
T ss_pred hhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998887766
Q ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCceEEEEEEEEEE
Q 000432 1192 GIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLVTEECRPPSNWPDVGTISFHNLQIRY 1271 (1513)
Q Consensus 1192 g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y 1271 (1513)
+..+||.+|++++|++++++.++|++++.+++|++|+|||||.||.++|+|+|+..+..+||++||++|+|+|+|+++||
T Consensus 1069 ~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RY 1148 (1381)
T KOG0054|consen 1069 GLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRY 1148 (1381)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEe
Confidence 65889999999999999999999999999999999999999999999999988777666699999999999999999999
Q ss_pred cCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCccccC
Q 000432 1272 AEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFDG 1351 (1513)
Q Consensus 1272 ~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~g 1351 (1513)
+|+.|+|||||||+|+||||||||||||||||||+++|||+.||.+|+|.|||+||+++++||||++++||||||+||+|
T Consensus 1149 rp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsG 1228 (1381)
T KOG0054|consen 1149 RPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSG 1228 (1381)
T ss_pred CCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCH
Q 000432 1352 TVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDS 1431 (1513)
Q Consensus 1352 TIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~ 1431 (1513)
|||+||||+++|+|+|||+|||+|+|+++|+++|+|||++|.|+|+|||.||||++||||||||++|||||||||||+|+
T Consensus 1229 TvR~NLDPf~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~ 1308 (1381)
T KOG0054|consen 1229 TVRFNLDPFDEYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDP 1308 (1381)
T ss_pred ccccccCcccccCHHHHHHHHHHhChHHHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHHHHHHHhhccc
Q 000432 1432 ATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIKEYSMRSQ 1503 (1513)
Q Consensus 1432 ~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~~~~~~~~ 1503 (1513)
+||+.||++||++|+|||||+||||++||+|||||+|||+|+|+|+|+|++|+++++|.|++++++++.++.
T Consensus 1309 ~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~EfdsP~~Ll~~~~S~f~~~l~~~~~~~~ 1380 (1381)
T KOG0054|consen 1309 ETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVVEFDSPAELLSDKDSLFSSLLKEAALSSR 1380 (1381)
T ss_pred HHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEeecCChHHHHhCCcchHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999999999999999999998876653
No 2
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2e-216 Score=2198.16 Aligned_cols=1348 Identities=34% Similarity=0.555 Sum_probs=1155.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCccccchhHHHHHHHH---HHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHH
Q 000432 119 FSSRIMQVVSWASTLFLLCKIIPNSAHVKFPWILRAWWFCS---FLFSILCTALHTYLRIRYRGQFRIQDYVDIIALLAS 195 (1513)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (1513)
++.+++..++++++.++...+++++ .++++.+++||++. +++.++......+ . ...... .+..+.+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~----~~~~~~~~ 184 (1622)
T PLN03130 115 LIVEALTWCSMLVMIGVETKIYIRE--FRWYVRFAVIYVLVGDAVMLNLVLSVKEYY---S-SFVLYL----YISEVAAQ 184 (1622)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc--CCCcceeehhHHHhhHHHHHHHHHHHHHHH---h-ccccce----ehhHHHHH
Confidence 5556777777777777666667664 67899999999998 6666552211111 1 100011 22222222
Q ss_pred HHHHHHH-hccccccccccCCCCCCCCcc-----ccccccccCCCCCCCCCCCChhHHHHHHhHHHHHHhhccCCCCCCC
Q 000432 196 TFLFGIS-IQGKTGLLLHTASSDTTEPFL-----NVKADKQFKSKRDSPYGKSTLLQLVTFSWLNPLFAVGIKKPLELDD 269 (1513)
Q Consensus 196 ~~~~~~~-~~~~~~~~~~~~~~~~~~p~~-----~~~~~~~~~~~~~~p~~~a~~~s~~~f~W~~pl~~~g~~~~L~~~D 269 (1513)
+.+.++. +..++.++. ..+.|.. +.+-++.+.+.+++||++||+|||+||+|++|++++|||++|+.+|
T Consensus 185 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~D 259 (1622)
T PLN03130 185 VLFGILLLVYFPNLDPY-----PGYTPIGSESVDDYEYEELPGGEQICPERHANIFSRIFFGWMTPLMQLGYKRPLTEKD 259 (1622)
T ss_pred HHHHHHHHHHHhcCCCC-----cccccccccccccccccCCcccCCCCcccccCHHHHHHHHHHHHHHHHHhcCCCChhh
Confidence 2221111 222222210 0111100 0000112334677999999999999999999999999999999999
Q ss_pred CCCCCccCcHHHHHHHHHHhHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Q 000432 270 IPDVDIKDSAEFLSNRFEQDLDLVKEKEGSTNPSIYKAIFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKS 349 (1513)
Q Consensus 270 l~~l~~~~~~~~~~~~f~~~w~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~ 349 (1513)
||+|+++|+++.++++|++.|+++.++ ++++++++++++||+.++.++++.++.+++.+++|++++.+++++.+++.
T Consensus 260 l~~l~~~~~~~~~~~~~~~~w~~~~~~---~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~~P~ll~~li~~v~~~~~ 336 (1622)
T PLN03130 260 VWKLDTWDQTETLYRSFQKCWDEELKK---PKPWLLRALNNSLGGRFWLGGFFKIGNDLSQFVGPLLLNLLLESMQNGEP 336 (1622)
T ss_pred ccCCChhhhHHHHHHHHHHHHHHHhcc---CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 999999999999999999999877532 45899999999999999999999999999999999999999999975432
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHH
Q 000432 350 RSLESGYLLALAFLGAKMVETIAQRQWIFGARQLGLRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDF 429 (1513)
Q Consensus 350 ~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~ 429 (1513)
. +.++.++++++++.++.+++.+++.+...+++.++|..++..+|+|.++++...+++.++|+++|+|++|++++.++
T Consensus 337 -~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~ 414 (1622)
T PLN03130 337 -A-WIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQI 414 (1622)
T ss_pred -c-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 2 45777776666666666777777888788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Q 000432 430 IFYSNYMFMLPVQISLAIYILRTNLGLGSLAALAATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKL 509 (1513)
Q Consensus 430 ~~~~~~~~~~pl~i~~~l~~L~~~lg~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~ 509 (1513)
+..+|.+|..|++++++++++|..+|++++++++++++++|++..+.+++++.+++.++.+|+|.+.++|+++|||+||+
T Consensus 415 ~~~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~ 494 (1622)
T PLN03130 415 CQQLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKC 494 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999888889999999999999999999999999999999999999999999
Q ss_pred hchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH
Q 000432 510 QAWDTRFLQKLESLRQVECIWLWKSLRLSATSAFIFWGSPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNL 589 (1513)
Q Consensus 510 ~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~l 589 (1513)
|+||+.|.+++++.|++|++..++..+..+...+++...|.++++++|++|.+.++.+|++.+|+++++++.+..|+..+
T Consensus 495 ~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l 574 (1622)
T PLN03130 495 YAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSIPVLVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFML 574 (1622)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998888888777778888888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccccccccCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecC
Q 000432 590 PDLLSNIAQGKVSADRIAAYLQEDEIQRDAVEYVPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTV 669 (1513)
Q Consensus 590 p~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~ 669 (1513)
|..+..+.++++|++||++|++.+|....... +.......|+++|++|+|++++++++|+|+||+|++|++++||||+
T Consensus 575 ~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~~--~~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~s 652 (1622)
T PLN03130 575 PNLITQAVNANVSLKRLEELLLAEERVLLPNP--PLEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGST 652 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcccccccCC--cccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCC
Confidence 99999999999999999999987664322111 1111234699999999998644568999999999999999999999
Q ss_pred CCcHHHHHHHHhcCccCCC-cEEEECCeEEEEcCCCcccCccHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCc
Q 000432 670 GSGKSSLLSCILGEIQKMA-GTVKISGTKAYVPQSPWILTGNIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDLT 748 (1513)
Q Consensus 670 GsGKStLl~~llg~~~~~~-G~i~~~g~~ayv~Q~~~l~~~ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T 748 (1513)
|||||||+++|+|+++|.+ |+|.+.|.+|||||+||||++||||||+||+|+|+++|++++++|+|.+|++.||+||+|
T Consensus 653 GSGKSTLl~lLlG~~~~~~GG~I~l~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T 732 (1622)
T PLN03130 653 GEGKTSLISAMLGELPPRSDASVVIRGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLT 732 (1622)
T ss_pred CCCHHHHHHHHHHhhccCCCceEEEcCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccc
Confidence 9999999999999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEE
Q 000432 749 EIGERGINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVM 828 (1513)
Q Consensus 749 ~Ige~g~~LSGGQkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl 828 (1513)
+|||+|.+|||||||||+||||+|++||||||||||||||+|++++|+++|+++.+++||+|+|||++++++.||+|++|
T Consensus 733 ~IGe~G~~LSGGQKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L 812 (1622)
T PLN03130 733 EIGERGVNISGGQKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILV 812 (1622)
T ss_pred cccCCCCCCCHHHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred eCCeEEEecChHHHHhcCccHHHHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhh
Q 000432 829 ENGRIAQAGRFEELLKQNIGFEVLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEIT 908 (1513)
Q Consensus 829 ~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 908 (1513)
++|+|+++|+|+|++++++.|.+++..+....+.....+ ....++.. .... ... ............. +.+
T Consensus 813 ~~G~i~e~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~--~~~~--~~~-~~~~~~~~~~~~~---~~~ 882 (1622)
T PLN03130 813 HEGMIKEEGTYEELSNNGPLFQKLMENAGKMEEYVEENG--EEEDDQTS--SKPV--ANG-NANNLKKDSSSKK---KSK 882 (1622)
T ss_pred eCCEEEEeCCHHHHHhcchhHHHHHHhcccccccccccc--cccccccc--cccc--ccc-ccccccccccccc---ccc
Confidence 999999999999999988889888765332111000000 00000000 0000 000 0000000000000 000
Q ss_pred hcCCCchhhhHhhhcccchHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHH
Q 000432 909 EKGGKLVQEEEREKGSIGKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYT 988 (1513)
Q Consensus 909 ~~~~~~~~~e~~~~g~v~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~ 988 (1513)
.....+.++|+++.|.+++++|+.|+++.++.+.+.+++++.++.+++.+++++|++++.+.... .......|+++|+
T Consensus 883 ~~~~~~~~~e~~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~--~~~~~~~~~~i~~ 960 (1622)
T PLN03130 883 EGKSVLIKQEERETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTP--KTHGPLFYNLIYA 960 (1622)
T ss_pred ccchhhhhHHHHhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--CCCchhHHHHHHH
Confidence 11223566788899999999999999976665555566667777888899999999966553211 1222456788899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHH
Q 000432 989 LLTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQ 1068 (1513)
Q Consensus 989 ~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~ 1068 (1513)
+++++..++.+++.++....+.++++++|++++++++++|++|||++|+|+|+|||++|++.+|..++..+..++..++.
T Consensus 961 ~l~~~~~i~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~ 1040 (1622)
T PLN03130 961 LLSFGQVLVTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHTNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQ 1040 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHH
Q 000432 1069 ILGTIGVMSQVAWQVFVIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLS 1148 (1513)
Q Consensus 1069 ~~~~l~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~ 1148 (1513)
+++.++++++++|+.+++++|+.+++++++++|.++.|+++|++.++++|+++|+.|+++|+.|||+|+++++|.+.+.+
T Consensus 1041 ~i~~~i~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~ 1120 (1622)
T PLN03130 1041 LLSTFVLIGIVSTISLWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGR 1120 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHH
Confidence 99999999999998888888888888888899999999999999999999999999999999999999999999999999
Q ss_pred HHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----cCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1149 LIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLVVLVTLPEGI-----INPSIAGLAVTYGINLNVLQASIIWNICNA 1223 (1513)
Q Consensus 1149 ~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~-----i~~g~~g~~l~y~~~l~~~l~~~~~~~~~l 1223 (1513)
..|.+.+..+.....++|+..++++++++++.++..+.+.. .+. ..++.+|++++|++.+...+.++++.+..+
T Consensus 1121 ~~~~~~~~~~~~~~~~~wl~~~l~~~~~~~i~~~~~~~v~~-~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~ 1199 (1622)
T PLN03130 1121 SMDNNIRFTLVNMSSNRWLAIRLETLGGLMIWLTASFAVMQ-NGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLA 1199 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998887666555443332 221 126889999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHH
Q 000432 1224 ENKMISVERILQYSNLPSEAPLVTEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKS 1303 (1513)
Q Consensus 1224 e~~~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKS 1303 (1513)
|+.++|+||+.+|++.|+|++...++..+++.||.+|.|+|+||+|+|+++.++||+|+||+|+||||||||||||||||
T Consensus 1200 e~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~is~~I~~GekVaIVGrSGSGKS 1279 (1622)
T PLN03130 1200 ENSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFEISPSEKVGIVGRTGAGKS 1279 (1622)
T ss_pred HHHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecceeEEEcCCCEEEEECCCCCCHH
Confidence 99999999999999999887654344456678999999999999999998877899999999999999999999999999
Q ss_pred HHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHh
Q 000432 1304 TLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRA 1383 (1513)
Q Consensus 1304 TLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~ 1383 (1513)
||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+||||+||||+++++|+|+|+||++|+++|+|++
T Consensus 1280 TLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~~~tdeei~~Al~~a~l~~~I~~ 1359 (1622)
T PLN03130 1280 SMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFNEHNDADLWESLERAHLKDVIRR 1359 (1622)
T ss_pred HHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCCCCCHHHHHHHHHHcCcHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhc
Q 000432 1384 KEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDS 1463 (1513)
Q Consensus 1384 lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~ 1463 (1513)
+|+||||+|+|+|.||||||||||||||||||+|+|||||||||+||.+||+.||++|++.+++||+|+||||++|+++|
T Consensus 1360 lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~ 1439 (1622)
T PLN03130 1360 NSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDC 1439 (1622)
T ss_pred CccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEeCCEEeEecChhHHHhcCChHHHHHHHHHhhc
Q 000432 1464 DLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIKEYSMR 1501 (1513)
Q Consensus 1464 DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~~~~~~ 1501 (1513)
|||+|||+|+|+|+|+|+||+++++|.|++|+++++..
T Consensus 1440 DrIlVLd~G~IvE~Gt~~eLl~~~~g~f~~L~~~~~~~ 1477 (1622)
T PLN03130 1440 DRILVLDAGRVVEFDTPENLLSNEGSAFSKMVQSTGAA 1477 (1622)
T ss_pred CEEEEEECCEEEEeCCHHHHHhCCCCHHHHHHHHcChh
Confidence 99999999999999999999998789999999988764
No 3
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=7.5e-212 Score=2156.60 Aligned_cols=1349 Identities=33% Similarity=0.538 Sum_probs=1152.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCCCccccchhHHHHHHHH---HHHHHHHHHHHHHHHHHhcccccchhHHHHHHHHHH
Q 000432 119 FSSRIMQVVSWASTLFLLCKIIPNSAHVKFPWILRAWWFCS---FLFSILCTALHTYLRIRYRGQFRIQDYVDIIALLAS 195 (1513)
Q Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (1513)
++.+++..++|+++..+...+++++ .++++.+++||++. +++.++......+ . ..... ..+..+.+.
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~----~~~~~~~~~ 184 (1495)
T PLN03232 115 LMVEAFAWFSMLVLIGLETKQYVKE--FRWYVRFGVVYVLVADAVLLDLVLPLKNSI---N-RTALY----LCISSRCCQ 184 (1495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhc--CCCCceeeehhHhhhhHHHHHHHHHHHHHH---h-ccccc----eehhHHHHH
Confidence 5667777788887777666777675 67899999999998 6666552111111 1 10001 123333333
Q ss_pred HHHHHHH-hccccccccccCCC-CCCCCccccccccccCCCCCCCCCCCChhHHHHHHhHHHHHHhhccCCCCCCCCCCC
Q 000432 196 TFLFGIS-IQGKTGLLLHTASS-DTTEPFLNVKADKQFKSKRDSPYGKSTLLQLVTFSWLNPLFAVGIKKPLELDDIPDV 273 (1513)
Q Consensus 196 ~~~~~~~-~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~p~~~a~~~s~~~f~W~~pl~~~g~~~~L~~~Dl~~l 273 (1513)
+.+.+.. +.+++.++. +..+ ...+...+.+-+..+.+.+.+||++||+|||+||+|++|++++||+++|+.+|||+|
T Consensus 185 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~s~~~f~w~~pl~~~g~~~~L~~~dl~~l 263 (1495)
T PLN03232 185 ALFGILLLVYIPELDPY-PGYHILNNESLDNVEYDALRGGENICPERYASIFSRIYFSWMTPLMQLGYRKPITEKDVWQL 263 (1495)
T ss_pred HHHHHHHHHhcccCCCC-CcccccccccccccccccccccCCCCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCC
Confidence 2222222 334433321 0000 000000000001223356789999999999999999999999999999999999999
Q ss_pred CccCcHHHHHHHHHHhHHHHHhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchh
Q 000432 274 DIKDSAEFLSNRFEQDLDLVKEKEGSTNPSIYKAIFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLE 353 (1513)
Q Consensus 274 ~~~~~~~~~~~~f~~~w~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~ 353 (1513)
+++|+++.++++|++.|+++.++ ++++++++++++|++.++.++++.++.+++.+++|++++.+++++.+++. . +
T Consensus 264 ~~~~~~~~~~~~~~~~w~~~~~~---~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~~P~ll~~li~~~~~~~~-~-~ 338 (1495)
T PLN03232 264 DQWDQTETLIKRFQRCWTEESRR---PKPWLLRALNNSLGGRFWLGGIFKIGHDLSQFVGPVILSHLLQSMQEGDP-A-W 338 (1495)
T ss_pred ChhhhHHHHHHHHHHHHHHhhcc---CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-c-c
Confidence 99999999999999999876532 45899999999999999999999999999999999999999999975432 2 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHHH
Q 000432 354 SGYLLALAFLGAKMVETIAQRQWIFGARQLGLRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFYS 433 (1513)
Q Consensus 354 ~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~ 433 (1513)
.++.++++++++.++.+++.+++.+...+++.++|..++..+|+|.++++...+++.++|+++|+|++|++++.+++..+
T Consensus 339 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i~~k~l~l~~~~~~~~~~G~i~n~ls~Dv~~i~~~~~~l 418 (1495)
T PLN03232 339 VGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAIFHKSLRLTHEARKNFASGKVTNMITTDANALQQIAEQL 418 (1495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 57778888888888888888888888899999999999999999999999999999999999999999999999999899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchh
Q 000432 434 NYMFMLPVQISLAIYILRTNLGLGSLAALAATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWD 513 (1513)
Q Consensus 434 ~~~~~~pl~i~~~l~~L~~~lg~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E 513 (1513)
+.+|..|++++++++++|..+|++++++++++++++|++..+++++++.+++.++.+|+|.+.++|+++|||+||+|+||
T Consensus 419 ~~l~~~p~~ii~~~~~l~~~lg~~~l~~~~v~~l~~pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e 498 (1495)
T PLN03232 419 HGLWSAPFRIIVSMVLLYQQLGVASLFGSLILFLLIPLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWE 498 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence 99999999999999999999999999998888888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 514 TRFLQKLESLRQVECIWLWKSLRLSATSAFIFWGSPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLL 593 (1513)
Q Consensus 514 ~~f~~~i~~~R~~E~~~~~~~~~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i 593 (1513)
+.+.+++++.|++|.+..++.....+...+++...|.++++++|++|.+.++.+|++.+|+++++++.+..|+..+|..+
T Consensus 499 ~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~ 578 (1495)
T PLN03232 499 KSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLL 578 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888887777777777888888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcccccccccccccCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcH
Q 000432 594 SNIAQGKVSADRIAAYLQEDEIQRDAVEYVPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGK 673 (1513)
Q Consensus 594 ~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGK 673 (1513)
..+.++++|++||++|++.++...+... +.......|+++|++|+|+++.++++|+|+||+|++||+++|||++||||
T Consensus 579 ~~~~~a~~s~~Ri~~~L~~~~~~~~~~~--~~~~~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGK 656 (1495)
T PLN03232 579 SQVVNANVSLQRIEELLLSEERILAQNP--PLQPGAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGK 656 (1495)
T ss_pred HHHHHHHHHHHHHHHHHcCccccccccC--CcCCCCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcH
Confidence 9999999999999999987653221111 11112347999999999986445689999999999999999999999999
Q ss_pred HHHHHHHhcCccCCCcE-EEECCeEEEEcCCCcccCccHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccC
Q 000432 674 SSLLSCILGEIQKMAGT-VKISGTKAYVPQSPWILTGNIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGE 752 (1513)
Q Consensus 674 StLl~~llg~~~~~~G~-i~~~g~~ayv~Q~~~l~~~ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige 752 (1513)
|||+++|+|+++|.+|. +.+.+.+|||||+||||++||||||+||+++++++|++++++|+|.+|++.+|+||+|+|||
T Consensus 657 STLl~lLlG~~~~~~G~i~~~~~~Iayv~Q~p~Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe 736 (1495)
T PLN03232 657 TSLISAMLGELSHAETSSVVIRGSVAYVPQVSWIFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGE 736 (1495)
T ss_pred HHHHHHHhCCCcccCCCEEEecCcEEEEcCccccccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecC
Confidence 99999999999999974 57899999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCe
Q 000432 753 RGINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGR 832 (1513)
Q Consensus 753 ~g~~LSGGQkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~ 832 (1513)
+|.+|||||||||+||||+|++||||||||||||||+|++++++++++.+.+++||+|+||||+++++.||+|++|+||+
T Consensus 737 ~G~~LSGGQkQRIaLARAly~~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~ 816 (1495)
T PLN03232 737 RGVNISGGQKQRVSMARAVYSNSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGM 816 (1495)
T ss_pred CCcccCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCE
Confidence 99999999999999999999999999999999999999999999999988889999999999999999999999999999
Q ss_pred EEEecChHHHHhcCccHHHHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhhhcCC
Q 000432 833 IAQAGRFEELLKQNIGFEVLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITEKGG 912 (1513)
Q Consensus 833 i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1513)
|+++|+|+|++++++.|.++++.+....+.... ........... ... +.. ..... ... ..+.+....
T Consensus 817 i~~~Gt~~eL~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~-~~~---~~~-----~~~~~-~~~-~~~~~~~~~ 883 (1495)
T PLN03232 817 IKEEGTFAELSKSGSLFKKLMENAGKMDATQEV--NTNDENILKLG-PTV---TID-----VSERN-LGS-TKQGKRGRS 883 (1495)
T ss_pred EEEecCHHHHHhcchhHHHHHHhcccccccccc--ccccccccccc-ccc---ccc-----ccccc-ccc-ccccccchh
Confidence 999999999999988998887654321110000 00000000000 000 000 00000 000 000001112
Q ss_pred CchhhhHhhhcccchHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHH
Q 000432 913 KLVQEEEREKGSIGKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTV 992 (1513)
Q Consensus 913 ~~~~~e~~~~g~v~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~ 992 (1513)
.+.++|+++.|.+++++|+.|+++.++.+.+.+++++.++.+++.++.++|+++|.+.... .......|+++|+++++
T Consensus 884 ~~~~~e~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~--~~~~~~~~l~~y~~l~~ 961 (1495)
T PLN03232 884 VLVKQEERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQSTP--KSYSPGFYIVVYALLGF 961 (1495)
T ss_pred hhhhHHHHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC--CCCCcchHHHHHHHHHH
Confidence 3567888999999999999999976665665566666777888889999999955443211 12234678999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHH
Q 000432 993 GSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGT 1072 (1513)
Q Consensus 993 ~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~ 1072 (1513)
+..++.+++.++....+.++++++|++++++++++|++|||++|+|+|+||+++|++.+|..++..+..++..++.++++
T Consensus 962 ~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~ 1041 (1495)
T PLN03232 962 GQVAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHTNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLST 1041 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCcCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHh
Q 000432 1073 IGVMSQVAWQVFVIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDN 1152 (1513)
Q Consensus 1073 l~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~ 1152 (1513)
+++++.+++...++++|+.+++++++.+|.++.|+++|.+..+++|+++|++|+++|+.|||+|+++++|.+++.+..|.
T Consensus 1042 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~ 1121 (1495)
T PLN03232 1042 FALIGTVSTISLWAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDN 1121 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHH
Confidence 98888888877777888888888888899999999999999999999999999999999999999999999999999999
Q ss_pred hchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1153 HSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLVVLVTLPEGII-----NPSIAGLAVTYGINLNVLQASIIWNICNAENKM 1227 (1513)
Q Consensus 1153 ~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~i-----~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~ 1227 (1513)
+.+..+.....++|+..++++++.+++.++..+.+.. .+.+ .++.+|++++|+..+..++.++++.++++|+.+
T Consensus 1122 ~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~ 1200 (1495)
T PLN03232 1122 NIRFTLANTSSNRWLTIRLETLGGVMIWLTATFAVLR-NGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSL 1200 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888999999999888766555544433321 2322 256788899999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHH
Q 000432 1228 ISVERILQYSNLPSEAPLVTEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQ 1307 (1513)
Q Consensus 1228 ~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~ 1307 (1513)
+|+||+.+|.+.|+|++...++..+++.||.+|.|+|+||+|+|+++.++||+|+||+|+||||||||||||||||||++
T Consensus 1201 ~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~ 1280 (1495)
T PLN03232 1201 NSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLN 1280 (1495)
T ss_pred HHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEcCCCEEEEECCCCCCHHHHHH
Confidence 99999999999988865432333456679999999999999999887778999999999999999999999999999999
Q ss_pred HHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhcc
Q 000432 1308 AIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEK 1387 (1513)
Q Consensus 1308 lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~g 1387 (1513)
+|+|+|+|++|+|.|||+||+++++++||++|++|||||+||+||||+||||+++++|+|+|+||++|+++|+|+++|+|
T Consensus 1281 lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~~~sdeei~~al~~a~l~~~I~~lp~G 1360 (1495)
T PLN03232 1281 ALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFSEHNDADLWEALERAHIKDVIDRNPFG 1360 (1495)
T ss_pred HHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCCCCCHHHHHHHHHHcCCHHHHHhCcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEE
Q 000432 1388 LDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVL 1467 (1513)
Q Consensus 1388 Ldt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIl 1467 (1513)
|||.|+|+|.||||||||||||||||||+|+|||||||||+||++||+.||++|++.+++||+|+||||++|+++||||+
T Consensus 1361 Ldt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIl 1440 (1495)
T PLN03232 1361 LDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKIL 1440 (1495)
T ss_pred CCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCEEeEecChhHHHhcCChHHHHHHHHHhhc
Q 000432 1468 VLSDGRIAEYDSPTKLLEREDSFFSQLIKEYSMR 1501 (1513)
Q Consensus 1468 VLd~G~IvE~Gtp~eLl~~~~~~f~~l~~~~~~~ 1501 (1513)
|||+|+|+|+|+|+||+++++|.|++|+++++..
T Consensus 1441 VL~~G~ivE~Gt~~eLl~~~~~~f~~l~~~~~~~ 1474 (1495)
T PLN03232 1441 VLSSGQVLEYDSPQELLSRDTSAFFRMVHSTGPA 1474 (1495)
T ss_pred EEECCEEEEECCHHHHHhCCCCHHHHHHHHhChh
Confidence 9999999999999999998778999999987754
No 4
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=1.2e-208 Score=2127.64 Aligned_cols=1358 Identities=33% Similarity=0.582 Sum_probs=1156.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhccc-c-cchhHHHHHHHHH
Q 000432 117 LAFSSRIMQVVSWASTLFLLCKIIPNSAHVKFPWILRAWWFCSFLFSILCTALHTYLRIRYRGQ-F-RIQDYVDIIALLA 194 (1513)
Q Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~w~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~ 194 (1513)
..+..+++..++|++++++...++.++ .+.+..+.+||++.+++.++.+++....... +.. . ........+.+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~l~~~e~~~~--~~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 175 (1522)
T TIGR00957 99 VFLVSPTLLGITMLLATFLIQLERRKG--VQSSGIMLTFWLVALVCALAILRSKILLALK-EDAIVDPFRDTTFYIYFAL 175 (1522)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHhcc--cCCCcchhHHHHHHHHHHHHHHHHHHHHhhc-ccccccceehhhHHHHHHH
Confidence 345556778888888887777777664 5678899999999998888777655322110 000 0 0000111111111
Q ss_pred HHHHHHHHhccccccccccCCCCCCCCccccccccccCCCCCCCCCCCChhHHHHHHhHHHHHHhhccCCCCCCCCCCCC
Q 000432 195 STFLFGISIQGKTGLLLHTASSDTTEPFLNVKADKQFKSKRDSPYGKSTLLQLVTFSWLNPLFAVGIKKPLELDDIPDVD 274 (1513)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~p~~~a~~~s~~~f~W~~pl~~~g~~~~L~~~Dl~~l~ 274 (1513)
..++++. .... ...|++. ........+||++||++||++|||+||++++|||++|+.+|||+++
T Consensus 176 ~~~~~~~----~~~~--------~~~~~~~----~~~~~~~~~~e~~a~~~s~~~f~W~~pl~~~g~~~~L~~~dl~~l~ 239 (1522)
T TIGR00957 176 VLSQLVL----SCFS--------DKSPLFS----ETNHDPNPCPESSASFLSRITFWWITGMAVYGYRQPLEESDLWSLN 239 (1522)
T ss_pred HHHHHHH----Hhhc--------CCCCccc----cccccCCCCCcccCCHHHHHHHHHhHHHHHHHhcCCCChhhccCCC
Confidence 1111111 1100 1123321 1012234689999999999999999999999999999999999999
Q ss_pred ccCcHHHHHHHHHHhHHHHHhhc--------------------------------------CCCCchhHHHHHHHHHHHH
Q 000432 275 IKDSAEFLSNRFEQDLDLVKEKE--------------------------------------GSTNPSIYKAIFFFIRKKA 316 (1513)
Q Consensus 275 ~~~~~~~~~~~f~~~w~~~~~~~--------------------------------------~~~~~~l~~~l~~~~~~~~ 316 (1513)
++++++.++++|++.|+++.++. ..++++++++++++||+.+
T Consensus 240 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~l~~~~~~~~ 319 (1522)
T TIGR00957 240 KEDTSEMVVPVLVENWKKECKKTRKQPVSAVYGKKDPSKPKGSSQLDANEEVEALIVKSPHKPRKPSLFKVLYKTFGPYF 319 (1522)
T ss_pred HhHhHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccCCccHHHHHHHHHhHHH
Confidence 99999999999999998763210 1234789999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 317 AINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQLGLRLRAALISHLY 396 (1513)
Q Consensus 317 ~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy 396 (1513)
+..+++.++.+++.+++|++++.+++++.++.... +.||.++++++++.++.+++.+++.+...+++.++|.+|+..+|
T Consensus 320 l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy 398 (1522)
T TIGR00957 320 LMSFCFKAIHDLMMFIGPQILSLLIRFVNDPMAPD-WQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVY 398 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999987654333 56888888888888899999999999999999999999999999
Q ss_pred HHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 397 RKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFYSNYMFMLPVQISLAIYILRTNLGLGSLAALAATLTVMTCNIPIT 476 (1513)
Q Consensus 397 ~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~~~l~~L~~~lg~~~l~~l~~~~~~~~~~~~~~ 476 (1513)
+|+|+++..+++++++|+++|+|++|++++.++..++|.+|..|++++++++++|..+|++++++++++++++|++..++
T Consensus 399 ~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~~~~~ 478 (1522)
T TIGR00957 399 RKALVITNSARKSSTVGEIVNLMSVDAQRFMDLATYINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLNAVMA 478 (1522)
T ss_pred HHHHhCChhhcCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 477 RIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSAFIFWGSPTFISVVT 556 (1513)
Q Consensus 477 ~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~~~~~~~p~~v~~~~ 556 (1513)
+..++.++++++.+|+|++.++|+++|||+||+|+||+.|.+++++.|++|++..++..+......+.+...|.++.+++
T Consensus 479 ~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (1522)
T TIGR00957 479 MKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCTPFLVALIT 558 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999988888877777778898888899
Q ss_pred HHHHHHh--cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCC-CCCcceEE
Q 000432 557 FGACMLL--GIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAVEYVPK-GRSEFEVE 633 (1513)
Q Consensus 557 f~~~~~~--~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~-~~~~~~I~ 633 (1513)
|++|.+. ++.++++.+|+++++++++..|+..+|..+..+.++++|++||++|++.++.++...+.... ......|+
T Consensus 559 f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~ 638 (1522)
T TIGR00957 559 FAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIERRTIKPGEGNSIT 638 (1522)
T ss_pred HHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccccccccCCCCCCcEE
Confidence 9998877 46799999999999999999999999999999999999999999999877654321111111 11123799
Q ss_pred EEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCeEEEEcCCCcccCccHHH
Q 000432 634 VVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGTKAYVPQSPWILTGNIRE 713 (1513)
Q Consensus 634 ~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~~ayv~Q~~~l~~~ti~e 713 (1513)
++|++|+|+++ ++++|+|+||+|++|++++|+||||||||||+++|+|+++|.+|+|.++|.+|||||+||++++||+|
T Consensus 639 ~~~~~~~~~~~-~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g~i~yv~Q~~~l~~~Ti~e 717 (1522)
T TIGR00957 639 VHNATFTWARD-LPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKGSVAYVPQQAWIQNDSLRE 717 (1522)
T ss_pred EEEeEEEcCCC-CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECCEEEEEcCCccccCCcHHH
Confidence 99999999743 35899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHH
Q 000432 714 NILFGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGT 793 (1513)
Q Consensus 714 NI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~illLDep~salD~~~~~ 793 (1513)
||+||.++++++|++++++|++.+|++.+|+||+|++||+|.+|||||||||+||||+|++|+||||||||||||+++++
T Consensus 718 NI~~g~~~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~~illLDEp~saLD~~~~~ 797 (1522)
T TIGR00957 718 NILFGKALNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNADIYLFDDPLSAVDAHVGK 797 (1522)
T ss_pred HhhcCCccCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH--hhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHHHHHHhhhhhhhhhccccc-C-
Q 000432 794 QLFKDCL--MGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQNIGFEVLVGAHSQALESVLTVET-S- 869 (1513)
Q Consensus 794 ~i~~~~~--~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~-~- 869 (1513)
++++.++ .+.++++|+|+|||++++++.||+|++|++|++++.|+++++.++++.|.++...+....+.....+. .
T Consensus 798 ~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 877 (1522)
T TIGR00957 798 HIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQRDGAFAEFLRTYAPDEQQGHLEDSWTA 877 (1522)
T ss_pred HHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhcchhHHHHHHhhccccccccccccccc
Confidence 9999887 35678999999999999999999999999999999999999999888888887644321110000000 0
Q ss_pred ---CCCCCCCCCCC--------ccCcCc----cccccccccCC--CccchhhhhhhhcCCCchhhhHhhhcccchHHHHH
Q 000432 870 ---SRTSQDPTPES--------ELNSDS----TSNVKLVHSQH--DSEHELSLEITEKGGKLVQEEEREKGSIGKEVYWS 932 (1513)
Q Consensus 870 ---~~~~~~~~~~~--------~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~~~~ 932 (1513)
....+....+. +..... ........... +.......+.++...+..++|+++.|.+++++|+.
T Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~y~~ 957 (1522)
T TIGR00957 878 LVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEETWKLMEADKAQTGQVELSVYWD 957 (1522)
T ss_pred cccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccchhhhHHHHHHhcCcccHHHHHH
Confidence 00000000000 000000 00000000000 00000000000112345677888899999999999
Q ss_pred HHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 933 YLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLVAITGLRT 1012 (1513)
Q Consensus 933 y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~ 1012 (1513)
|+++. |+..+++++++.++.+++.++.++|++|+.+......+......|+++|++++++..++.+++.++....+.++
T Consensus 958 Y~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~iy~~l~i~~~~~~~~~~~~~~~~~~~~ 1036 (1522)
T TIGR00957 958 YMKAI-GLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQNNTSLRLSVYGALGILQGFAVFGYSMAVSIGGIQA 1036 (1522)
T ss_pred HHHHc-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99965 44444455556667788889999999966553211111222346777999999999999999999999999999
Q ss_pred HHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Q 000432 1013 AQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVIFIPVTG 1092 (1513)
Q Consensus 1013 s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~ip~~~ 1092 (1513)
++++|++++++++++|++|||++|+|+|+|||++|++.+|..++..+..++..++.+++.++++++.+|+++++++|+++
T Consensus 1037 ~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~~~~~~~~ 1116 (1522)
T TIGR00957 1037 SRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAVIIPPLGL 1116 (1522)
T ss_pred HHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHH
Q 000432 1093 ICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEWLCFRLN 1172 (1513)
Q Consensus 1093 l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~ 1172 (1513)
++++++++|.+++|+++|++.++++|+++|+.|+++|+.|||+|++|++|.+++.+..|...++.+.....++|+..+++
T Consensus 1117 ~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1196 (1522)
T TIGR00957 1117 LYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANRWLAVRLE 1196 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCC
Q 000432 1173 LLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLVTEECRP 1252 (1513)
Q Consensus 1173 ~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~~~~~~ 1252 (1513)
+++.+++.++..+.+ ...|.+++|.+|++++|+.++..++.++++.++++|+.++|+||+.+|.+.|+|++...++..+
T Consensus 1197 ~~~~~~~~~~~~~~v-~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~ 1275 (1522)
T TIGR00957 1197 CVGNCIVLFAALFAV-ISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPWQIQETAP 1275 (1522)
T ss_pred HHHHHHHHHHHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCC
Confidence 988765544444333 2357899999999999999999999999999999999999999999999988876533334456
Q ss_pred CCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCh
Q 000432 1253 PSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGL 1332 (1513)
Q Consensus 1253 ~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l 1332 (1513)
++.||.+|.|+|+||+|+|+++.++||+||||+|+||||||||||||||||||+++|+|+|+|++|+|.|||+||+++++
T Consensus 1276 ~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~ 1355 (1522)
T TIGR00957 1276 PSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDGLNIAKIGL 1355 (1522)
T ss_pred CCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECCEEccccCH
Confidence 67899999999999999999877789999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhceEEEcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHH
Q 000432 1333 HDLRSRLGIIPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRT 1412 (1513)
Q Consensus 1333 ~~LR~~isiVpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARA 1412 (1513)
++||++|++|||||+||+||||+||||+++++|||+|+||++|+++++|.++|+||||+|+|+|.|||||||||+|||||
T Consensus 1356 ~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARA 1435 (1522)
T TIGR00957 1356 HDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQRQLVCLARA 1435 (1522)
T ss_pred HHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhcCChHHH
Q 000432 1413 LLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFS 1492 (1513)
Q Consensus 1413 LLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~ 1492 (1513)
|||+|+|||||||||+||.+||+.||++|++.+++||||+||||++|+++||||+|||+|+|+|+|+|+||+++ +|.|+
T Consensus 1436 LLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eLl~~-~~~f~ 1514 (1522)
T TIGR00957 1436 LLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNLLQQ-RGIFY 1514 (1522)
T ss_pred HHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998 69999
Q ss_pred HHHHHH
Q 000432 1493 QLIKEY 1498 (1513)
Q Consensus 1493 ~l~~~~ 1498 (1513)
+|+++.
T Consensus 1515 ~l~~~~ 1520 (1522)
T TIGR00957 1515 SMAKDA 1520 (1522)
T ss_pred HHHHHc
Confidence 999875
No 5
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=2.3e-198 Score=2019.06 Aligned_cols=1254 Identities=28% Similarity=0.463 Sum_probs=1092.2
Q ss_pred CCCCCCCChhHHHHHHhHHHHHHhhccCCCCCCCCCCCCccCcHHHHHHHHHHhHHHHHhhcCCCCchhHHHHHHHHHHH
Q 000432 236 DSPYGKSTLLQLVTFSWLNPLFAVGIKKPLELDDIPDVDIKDSAEFLSNRFEQDLDLVKEKEGSTNPSIYKAIFFFIRKK 315 (1513)
Q Consensus 236 ~~p~~~a~~~s~~~f~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~~~~~~~~~~l~~~l~~~~~~~ 315 (1513)
.+||++||+|||+||||++|++++||+++|+.+|||+|+++++++.++++|++.|+++..++ .++++++++++++|++.
T Consensus 3 ~~pe~~a~~~s~~~F~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~~~~~w~~~~~~~-~~~~~L~~~l~~~~~~~ 81 (1490)
T TIGR01271 3 RSPVEKANFLSKLFFWWTRPILRKGYRQKLELSDIYQIPSFDSADNLSERLEREWDRELASA-KKNPKLLNALRRCFFWR 81 (1490)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHhcCCCChhhccCCChHHhHHHHHHHHHHHHHHHHhcc-CCCChHHHHHHHHHHHH
Confidence 46999999999999999999999999999999999999999999999999999998765322 35689999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 316 AAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQLGLRLRAALISHL 395 (1513)
Q Consensus 316 ~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i 395 (1513)
+++.+++.++.+++.+++|++++.+|++++.......+.+|.++++++++.++.+++.+++.|...++++++|.+|+..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~i 161 (1490)
T TIGR01271 82 FVFYGILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLI 161 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998543222224688888889999999999999999999999999999999999
Q ss_pred HHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 396 YRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFYSNYMFMLPVQISLAIYILRTNLGLGSLAALAATLTVMTCNIPI 475 (1513)
Q Consensus 396 y~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~~~l~~L~~~lg~~~l~~l~~~~~~~~~~~~~ 475 (1513)
|+|+|+++..++++.++|+++|+|++|++++.+++.++|.+|..|+++++++++||..+|+++++++++++++++++.++
T Consensus 162 y~K~L~l~~~~~~~~~~g~i~nl~s~Dv~~i~~~~~~~~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~ 241 (1490)
T TIGR01271 162 YKKTLKLSSRVLDKISTGQLVSLLSNNLNKFDEGLALAHFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACL 241 (1490)
T ss_pred HHHHHhCCHHHhcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 476 TRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSAFIFWGSPTFISVV 555 (1513)
Q Consensus 476 ~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~~~~~~~p~~v~~~ 555 (1513)
++++.++++++|+.+|+|++.++|+++|||+||+|+||+.|.+++++.|+.|++..++..+......++++..|.+++++
T Consensus 242 ~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (1490)
T TIGR01271 242 GQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFFSGFFVVFL 321 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988888888888889999999
Q ss_pred HHHHHHHhcccccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCCCCcceEEE
Q 000432 556 TFGACMLLGIQLTAGRVLSALATFRMLQDPIF-NLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAVEYVPKGRSEFEVEV 634 (1513)
Q Consensus 556 ~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~-~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~I~~ 634 (1513)
+|++|.+.++ ++++.+|+++++|++++.|+. .+|..+..+.++++|++||++||+.+|.+..... .....|++
T Consensus 322 ~f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~~~-----~~~~~i~~ 395 (1490)
T TIGR01271 322 SVVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLEYN-----LTTTEVEM 395 (1490)
T ss_pred HHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccc-----CCCCceEE
Confidence 9999988754 789999999999999999985 7999999999999999999999988765432110 12236999
Q ss_pred EeEEEEeCCC-------------------------------CCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcC
Q 000432 635 VNGKFSWNPE-------------------------------SSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGE 683 (1513)
Q Consensus 635 ~~~sf~~~~~-------------------------------~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~ 683 (1513)
+|++|+|+.. ..+++|+|+||+|++|++++|+|||||||||||++|+|+
T Consensus 396 ~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~G~ 475 (1490)
T TIGR01271 396 VNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIMGE 475 (1490)
T ss_pred ecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 9999999631 014689999999999999999999999999999999999
Q ss_pred ccCCCcEEEECCeEEEEcCCCcccCccHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHH
Q 000432 684 IQKMAGTVKISGTKAYVPQSPWILTGNIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQ 763 (1513)
Q Consensus 684 ~~~~~G~i~~~g~~ayv~Q~~~l~~~ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkq 763 (1513)
++|.+|+|.++|.+|||+|+||+|++||+|||+||.++++++|++++++|+|.+|++.+|+||+|+|||+|.+|||||||
T Consensus 476 ~~~~~G~i~~~g~iayv~Q~~~l~~~Ti~eNI~~g~~~~~~~~~~~~~~~~L~~~l~~l~~g~~t~vg~~g~~LSgGqkq 555 (1490)
T TIGR01271 476 LEPSEGKIKHSGRISFSPQTSWIMPGTIKDNIIFGLSYDEYRYTSVIKACQLEEDIALFPEKDKTVLGEGGITLSGGQRA 555 (1490)
T ss_pred CCCCCceEEECCEEEEEeCCCccCCccHHHHHHhccccchHHHHHHHHHHhHHHHHHhccccccccccCcCCCcCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHH
Q 000432 764 RIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELL 843 (1513)
Q Consensus 764 Ri~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~ 843 (1513)
||+||||+|++|+||||||||||||++++++++++|+.+.++++|+|+|||+++.++.||+|++|++|++++.|+++++.
T Consensus 556 Ri~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~l~~g~i~~~g~~~~l~ 635 (1490)
T TIGR01271 556 RISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILLLHEGVCYFYGTFSELQ 635 (1490)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999998888888899999999999999999999999999999999999999
Q ss_pred hcCccHHHHHHhhhhhhh---h--------------hc--c-----cccC------CCCC--CC---------C------
Q 000432 844 KQNIGFEVLVGAHSQALE---S--------------VL--T-----VETS------SRTS--QD---------P------ 876 (1513)
Q Consensus 844 ~~~~~~~~l~~~~~~~~~---~--------------~~--~-----~~~~------~~~~--~~---------~------ 876 (1513)
+.+..|.+.+.......+ . .+ . .+.. +... +. .
T Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 715 (1490)
T TIGR01271 636 AKRPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPEFAEKRKQSIILNPIASARKF 715 (1490)
T ss_pred hcChHHHHHHhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 877777666531110000 0 00 0 0000 0000 00 0
Q ss_pred --------CC---CCccCcCccc----------------cccc-------------c--------cc----CCCcc----
Q 000432 877 --------TP---ESELNSDSTS----------------NVKL-------------V--------HS----QHDSE---- 900 (1513)
Q Consensus 877 --------~~---~~~~~~~~~~----------------~~~~-------------~--------~~----~~~~~---- 900 (1513)
.. ..+...++.. .... . .. .+.+.
T Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (1490)
T TIGR01271 716 SFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSVLQLMTHSNRGENRREQLQTS 795 (1490)
T ss_pred ccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccchhhcccccccccccccccccc
Confidence 00 0000000000 0000 0 00 00000
Q ss_pred --------------ch--h-----hhh----------hhhcCCCchhhhHhhhcccchHHHHHHHHhhhhhhHHHHHHHH
Q 000432 901 --------------HE--L-----SLE----------ITEKGGKLVQEEEREKGSIGKEVYWSYLTAVKGGALVPIILLA 949 (1513)
Q Consensus 901 --------------~~--~-----~~~----------~~~~~~~~~~~e~~~~g~v~~~~~~~y~~~~~~~~~~~~~~l~ 949 (1513)
.. . ..+ +.....++.++|+++.|.++|++|+.|++..+++..+.+++++
T Consensus 796 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~vY~~Y~~~~g~~~~~~~~~~~ 875 (1490)
T TIGR01271 796 FRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNTYLRYITTNRNLVFVLIFCLV 875 (1490)
T ss_pred cccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHHHHHHHHhcCcHHHHHHHHHH
Confidence 00 0 000 0000123466788889999999999999976554555555666
Q ss_pred HHHHHHHHHhhhhhhc-ccCCC-----CCCCCC------------CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 950 QSSFQVLQVASNYWMA-WASPP-----TSDGEP------------ALGMNIVLLVYTLLTVGSSLCVLLRAMLVAITGLR 1011 (1513)
Q Consensus 950 ~~~~~~~~~~~~~~l~-~~~~~-----~~~~~~------------~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~ 1011 (1513)
.++.+++..+.++|+. |+.+. ...... .....+++++|+++.++..++.+++.+++...+.+
T Consensus 876 ~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1490)
T TIGR01271 876 IFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTADSVLALGFFRGLPLVHTLLT 955 (1490)
T ss_pred HHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6778899999999998 54321 000000 01112225566666666777888899999999999
Q ss_pred HHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000432 1012 TAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVIFIPVT 1091 (1513)
Q Consensus 1012 ~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~ip~~ 1091 (1513)
+++++|.+++++++++|++|||++|+|+|+|||++|++.+|..++..+..++..++.+++.++++++.+|+++++++|++
T Consensus 956 ~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~l~~~~l~ 1035 (1490)
T TIGR01271 956 VSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIFIAAIPVA 1035 (1490)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHH
Q 000432 1092 GICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEWLCFRL 1171 (1513)
Q Consensus 1092 ~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l 1171 (1513)
+++++++++|.+++|+++|++..+++|+++|+.|+++|+.|||+|+++++|.+++.+..|.+.+.++.....++|+..++
T Consensus 1036 ~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~ 1115 (1490)
T TIGR01271 1036 VIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTLRWFQMRI 1115 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccc---
Q 000432 1172 NLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLVTE--- 1248 (1513)
Q Consensus 1172 ~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~~--- 1248 (1513)
++++.+.+..++++.+. ...+++|.+|++++|++.+...+.++++.++++++.+.|+||+.+|.+.|+|++...+
T Consensus 1116 ~~i~~~~~~~~~~l~~~--~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~~~~~~~~ 1193 (1490)
T TIGR01271 1116 DIIFVFFFIAVTFIAIG--TNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEPRPSGGGG 1193 (1490)
T ss_pred HHHHHHHHHHHHHHHHH--HhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccccc
Confidence 99876554443333222 2346788899999999999999999999999999999999999999998887542211
Q ss_pred -----------CCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCC
Q 000432 1249 -----------ECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTM 1317 (1513)
Q Consensus 1249 -----------~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~ 1317 (1513)
...+++.||..|.|+|+||+|+|+++.++||+||||+|+||||||||||||||||||+++|+|+++ ++
T Consensus 1194 ~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~-~~ 1272 (1490)
T TIGR01271 1194 KYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS-TE 1272 (1490)
T ss_pred ccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CC
Confidence 123456799999999999999999877889999999999999999999999999999999999998 79
Q ss_pred cEEEEcCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCC
Q 000432 1318 GSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGE 1397 (1513)
Q Consensus 1318 G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~ 1397 (1513)
|+|+|||+||++++++++|++|++|||||+||+||||+||||+++++|+|+|+||++|+++++|+++|+||||+|+|+|.
T Consensus 1273 G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e~G~ 1352 (1490)
T TIGR01271 1273 GEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVDGGY 1352 (1490)
T ss_pred cEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCccccccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEe
Q 000432 1398 NWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEY 1477 (1513)
Q Consensus 1398 nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~ 1477 (1513)
||||||||||||||||||+|+|||||||||+||.+||+.||++|++.+++||||+||||++|+++||||+|||+|+|+|+
T Consensus 1353 nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlvL~~G~ivE~ 1432 (1490)
T TIGR01271 1353 VLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHRVEALLECQQFLVIEGSSVKQY 1432 (1490)
T ss_pred cCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChhHHHhcCChHHHHHHHHHhh
Q 000432 1478 DSPTKLLEREDSFFSQLIKEYSM 1500 (1513)
Q Consensus 1478 Gtp~eLl~~~~~~f~~l~~~~~~ 1500 (1513)
|+|++|+++ +|.|++|++++..
T Consensus 1433 g~p~~Ll~~-~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1433 DSIQKLLNE-TSLFKQAMSAADR 1454 (1490)
T ss_pred CCHHHHHcC-CcHHHHHHHHhCh
Confidence 999999985 8999999998775
No 6
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2e-189 Score=1929.86 Aligned_cols=1258 Identities=30% Similarity=0.490 Sum_probs=1084.0
Q ss_pred CCCCCCCCCChhHHHHHHhHHHHHHhhccCCCCCCCCCCCCccCcHHHHHHHHHHhHHHHHhhc----------------
Q 000432 234 KRDSPYGKSTLLQLVTFSWLNPLFAVGIKKPLELDDIPDVDIKDSAEFLSNRFEQDLDLVKEKE---------------- 297 (1513)
Q Consensus 234 ~~~~p~~~a~~~s~~~f~W~~pl~~~g~~~~L~~~Dl~~l~~~~~~~~~~~~f~~~w~~~~~~~---------------- 297 (1513)
..+.||++||||.++++.|++|.+.+..|..|+.+|+|+...+.|+-++..++.+..++...+.
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (1560)
T PTZ00243 57 YTPVPEETASWFQRYYYGWVYEYVLLASKEQLTEEDLPPPTRDVRAHECGLRLSRAVQAAMYERNAWNCMVGAEVVSTLD 136 (1560)
T ss_pred CCCCccchhhHHHHHHHHHHHHHHHHHHHhhcccccCCCCcchhhHHHHhHHHHHHHHHHHHhhcccccccccEEEeecc
Confidence 3457999999999999999999999999999999999999999998777666655433222110
Q ss_pred --------------------------------------------------------------------------------
Q 000432 298 -------------------------------------------------------------------------------- 297 (1513)
Q Consensus 298 -------------------------------------------------------------------------------- 297 (1513)
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (1560)
T PTZ00243 137 ASSRGVLRWVGVPQQGGYTRMMAGVEWSVPPALRTAARSDDSGASPFFNGVAHGEHLFTPEQSNMSTLEEPTDVRLYLSS 216 (1560)
T ss_pred ccccceEEeecccccCCCcceeeeeeeccCchhhhcccCCCCCCccccccccccccccCcccCCceeeeeeheeeEeecc
Confidence
Q ss_pred -----------CCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHH
Q 000432 298 -----------GSTNPSIYKAIFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAK 366 (1513)
Q Consensus 298 -----------~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~ 366 (1513)
.++..++++++++++|+.++..++++++.+++.+++|++++.++++++++.. ....++.++++++++.
T Consensus 217 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~-~~~~g~~l~~~l~~~~ 295 (1560)
T PTZ00243 217 TGSVVRPGPPPTPKRLSLLRTLFAALPYYVWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNA-TWGRGLGLVLTLFLTQ 295 (1560)
T ss_pred cccccCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-chhHHHHHHHHHHHHH
Confidence 0112379999999999999999999999999999999999999999965433 2245788888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 367 MVETIAQRQWIFGARQLGLRLRAALISHLYRKGLHLSSQSRQ--SHTSGEIINYMSVDVQRISDFIFYSNYMFMLPVQIS 444 (1513)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~l~~~~~~--~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~ 444 (1513)
++.+++.+++.+...+.+.++|.+|...+|+|+++++..... +.++|+++|+|++|++++.+++.++|.+|..|++++
T Consensus 296 ~~~~~~~~~~~~~~~r~~~~~r~~L~~~if~K~l~ls~~~~~~~~~~~G~i~nl~s~Dv~~i~~~~~~~~~l~~~Pl~li 375 (1560)
T PTZ00243 296 LIQSVCLHRFYYISIRCGLQYRSALNALIFEKCFTISSKSLAQPDMNTGRIINMMSTDVERINSFMQYCMYLWSSPMVLL 375 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhCCCCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999987665 568999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHH
Q 000432 445 LAIYILRTNLGLGSLAALAATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLR 524 (1513)
Q Consensus 445 ~~l~~L~~~lg~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R 524 (1513)
+++++||..+|+++++|++++++++|++.++++++.++++++|+.+|+|++.++|+++|||+||+++||+.|.+++++.|
T Consensus 376 ~~~~lL~~~lG~~al~gv~vl~v~~pl~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R 455 (1560)
T PTZ00243 376 LSILLLSRLVGWCALMAVAVLLVTLPLNGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKR 455 (1560)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 525 QVECIWLWKSLRLSATSAFIFWGSPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSAD 604 (1513)
Q Consensus 525 ~~E~~~~~~~~~~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~ 604 (1513)
++|++.+++..+..++..++++..|.++.+++|++|.+.++.||++.+|+++++|++++.|+.++|..++.+.++++|++
T Consensus 456 ~~El~~l~~~~~~~~~~~~~~~~~p~l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~ 535 (1560)
T PTZ00243 456 ARELRYLRDVQLARVATSFVNNATPTLMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIK 535 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988888889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccccccccc----c-----------------------------ccC-------------------------CC
Q 000432 605 RIAAYLQEDEIQRDAV----E-----------------------------YVP-------------------------KG 626 (1513)
Q Consensus 605 RI~~fL~~~e~~~~~~----~-----------------------------~~~-------------------------~~ 626 (1513)
||++||+.+|...+.. + ..+ ..
T Consensus 536 RI~~fL~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (1560)
T PTZ00243 536 RISTFLECDNATCSTVQDMEEYWREQREHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKR 615 (1560)
T ss_pred HHHHHHcCccccccccccchhhcccccccccccccccccccccccccccccccccccccccccccchhhccccccccccc
Confidence 9999998765211000 0 000 00
Q ss_pred CCcceEEEEeEEEEeCCC-------------------------------------CCCCcccceeEEEeCCcEEEEEecC
Q 000432 627 RSEFEVEVVNGKFSWNPE-------------------------------------SSSPTLDGIQLKVKRGMKVAICGTV 669 (1513)
Q Consensus 627 ~~~~~I~~~~~sf~~~~~-------------------------------------~~~~~L~~i~l~i~~G~~~~ivG~~ 669 (1513)
.....+.++|++|+|+.. .++++|+|+||+|++|++++|+|+|
T Consensus 616 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i~~G~~~~IiG~n 695 (1560)
T PTZ00243 616 HPSPSVVVEDTDYGSPSSASRHIVEGGTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSVPRGKLTVVLGAT 695 (1560)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccCCceeEeeeEEEECCCCEEEEECCC
Confidence 011246677777775410 1246899999999999999999999
Q ss_pred CCcHHHHHHHHhcCccCCCcEEEECCeEEEEcCCCcccCccHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCcc
Q 000432 670 GSGKSSLLSCILGEIQKMAGTVKISGTKAYVPQSPWILTGNIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDLTE 749 (1513)
Q Consensus 670 GsGKStLl~~llg~~~~~~G~i~~~g~~ayv~Q~~~l~~~ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~ 749 (1513)
|||||||+++|+|+++|++|+|.+++.+|||||+||++++||+|||+|+.++++++|++++++|++.+|++.+|+|++|.
T Consensus 696 GsGKSTLL~~i~G~~~~~~G~i~~~~~i~yv~Q~~~l~~~Tv~enI~~~~~~~~~~~~~~~~~~~l~~~l~~l~~g~~t~ 775 (1560)
T PTZ00243 696 GSGKSTLLQSLLSQFEISEGRVWAERSIAYVPQQAWIMNATVRGNILFFDEEDAARLADAVRVSQLEADLAQLGGGLETE 775 (1560)
T ss_pred CCcHHHHHHHHhcCCCCCCcEEEECCeEEEEeCCCccCCCcHHHHHHcCChhhHHHHHHHHHHhhhHHHHHHhhccchHH
Confidence 99999999999999999999999999999999999999999999999999888889999999999999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEe
Q 000432 750 IGERGINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVME 829 (1513)
Q Consensus 750 Ige~g~~LSGGQkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~ 829 (1513)
+|++|.+|||||||||+||||+|++|+|||||||||+||++++++++++++.+.++++|+|+|||+++.++.||+|++|+
T Consensus 776 i~~~g~~LSGGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~ 855 (1560)
T PTZ00243 776 IGEKGVNLSGGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALG 855 (1560)
T ss_pred hcCCCCCCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEE
Confidence 99999999999999999999999999999999999999999999999998877778999999999999999999999999
Q ss_pred CCeEEEecChHHHHhcCccHHHHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhhh
Q 000432 830 NGRIAQAGRFEELLKQNIGFEVLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITE 909 (1513)
Q Consensus 830 ~G~i~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 909 (1513)
+|++++.|+++++++.. .|.++........+..+.....+.. ..... ....... ......+....+... ......
T Consensus 856 ~G~i~~~G~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~ 930 (1560)
T PTZ00243 856 DGRVEFSGSSADFMRTS-LYATLAAELKENKDSKEGDADAEVA-EVDAA-PGGAVDH-EPPVAKQEGNAEGGD-GAALDA 930 (1560)
T ss_pred CCEEEEecCHHHHHhCh-HHHHHHHhhcccccccccccccccc-ccccc-ccccccc-ccccccccccccccc-cccccc
Confidence 99999999999998753 5666654321111000000000000 00000 0000000 000000000000000 000011
Q ss_pred cCCCchhhhHhhhcccchHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHH
Q 000432 910 KGGKLVQEEEREKGSIGKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTL 989 (1513)
Q Consensus 910 ~~~~~~~~e~~~~g~v~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~ 989 (1513)
...++.++|+++.|.++|++|+.|++..++...+.+++++.++.+++..+.++|+++|.+... ......|+++|++
T Consensus 931 ~~~~l~~~e~~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~~----~~~~~~~l~~y~~ 1006 (1560)
T PTZ00243 931 AAGRLMTREEKASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRSF----KLSAATYLYVYLG 1006 (1560)
T ss_pred ccchhhhHHHHhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----CCCcccHHHHHHH
Confidence 223566778888999999999999997665555555555566778888899999995443321 1223457788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHH
Q 000432 990 LTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQI 1069 (1513)
Q Consensus 990 l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~ 1069 (1513)
+.++..++.+++.+.....+.++++++|++++++++++|++|||++|+|+|+|||++|++.+|..++..+..++..++.+
T Consensus 1007 ~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~ 1086 (1560)
T PTZ00243 1007 IVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSI 1086 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888888888888899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHH
Q 000432 1070 LGTIGVMSQVAWQVFVIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSL 1149 (1513)
Q Consensus 1070 ~~~l~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~ 1149 (1513)
++.++++++.+|.++++++|+.++++++.++|.+..|+++|....+++|++++++|+++|+.|||+|++|++|.+++.+.
T Consensus 1087 i~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~ 1166 (1560)
T PTZ00243 1087 CSSILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRR 1166 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHH
Confidence 99999999999988888888888888889999999999999999999999999999999999999999999999999999
Q ss_pred HHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1150 IDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLVVLV---TLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENK 1226 (1513)
Q Consensus 1150 ~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~---~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~ 1226 (1513)
.|.+.+..+.....++|+..++++++++++.+.+++.+ ....+.+++|.++++++|+.++..++.++++.+.++|+.
T Consensus 1167 ~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~ 1246 (1560)
T PTZ00243 1167 LDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEAD 1246 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998876554444332 223455789999999999999999999999999999999
Q ss_pred HHHHHHHHHhcC-CCCCCCCc-----------------------ccCCCCC---CCCCCCceEEEEEEEEEEcCCCCcce
Q 000432 1227 MISVERILQYSN-LPSEAPLV-----------------------TEECRPP---SNWPDVGTISFHNLQIRYAEHLPSVL 1279 (1513)
Q Consensus 1227 ~~sveRi~e~~~-~~~e~~~~-----------------------~~~~~~~---~~wp~~g~I~f~nvsf~Y~~~~~~vL 1279 (1513)
++|+||+.+|++ .|+|+... .+...++ +.||..|.|+|+||+|+|+++.++||
T Consensus 1247 ~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL 1326 (1560)
T PTZ00243 1247 MNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVL 1326 (1560)
T ss_pred HHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCcee
Confidence 999999999996 34332110 0011122 23557799999999999998878899
Q ss_pred eeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCC
Q 000432 1280 KNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDP 1359 (1513)
Q Consensus 1280 k~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp 1359 (1513)
+||||+|+||||||||||||||||||+++|+|+|+|++|+|+|||+||+++++++||++|++|||||+||+||||+||||
T Consensus 1327 ~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp 1406 (1560)
T PTZ00243 1327 RGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDP 1406 (1560)
T ss_pred ecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccC-CCEEEEecCCCCCCHHHHHHHH
Q 000432 1360 LVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKK-SSILVLDEATASVDSATDGVIQ 1438 (1513)
Q Consensus 1360 ~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~-~~ILiLDEaTSslD~~Te~~Iq 1438 (1513)
+++++|+|||+||++|+++++|.++|+||||.|+|+|.|||||||||||||||||++ |+|||||||||+||++||+.||
T Consensus 1407 ~~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq 1486 (1560)
T PTZ00243 1407 FLEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQ 1486 (1560)
T ss_pred ccCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999996 8999999999999999999999
Q ss_pred HHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHHHHHHHhhc
Q 000432 1439 KIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIKEYSMR 1501 (1513)
Q Consensus 1439 ~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~~~~~~ 1501 (1513)
++|++.+++||||+||||++|+++||+|+|||+|+|+|+|+|+||+++++|.|++|+++.+..
T Consensus 1487 ~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~~~~ 1549 (1560)
T PTZ00243 1487 ATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEALGRS 1549 (1560)
T ss_pred HHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHhChh
Confidence 999999999999999999999999999999999999999999999997789999999987653
No 7
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-156 Score=1480.85 Aligned_cols=1103 Identities=22% Similarity=0.285 Sum_probs=834.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 000432 374 RQWIFGARQLGLRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFYS-NYMFMLPVQISLAIYILRT 452 (1513)
Q Consensus 374 ~~~~~~~~~~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~-~~~~~~pl~i~~~l~~L~~ 452 (1513)
..|.+...|...++| ....+..||....+++.+.+|++.+.|+.|+++|++.+..- ..+......++.++.+-+.
T Consensus 93 ~c~~~~geRq~~riR----~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~ 168 (1228)
T KOG0055|consen 93 SCWMRTGERQTARIR----SKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFY 168 (1228)
T ss_pred HHHHHHHHHHHHHHH----HHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344544445555555 55566667778888998999999999999999999987532 1111111122222222221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHH
Q 000432 453 NLGLGSLAALAATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLW 532 (1513)
Q Consensus 453 ~lg~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~ 532 (1513)
.-...+++.+.+.+++......+++.+.+...+.+++..+--+...|.+.+||++-.|+-|+...++..+.-+.-.+...
T Consensus 169 ~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi 248 (1228)
T KOG0055|consen 169 YGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGI 248 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHH
Confidence 11123455566666666667777888888888888888888899999999999999999999988888765554444433
Q ss_pred HHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000432 533 KSLRLSATSA-FI-FWGSPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYL 610 (1513)
Q Consensus 533 ~~~~~~~~~~-~~-~~~~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL 610 (1513)
+......+.. +. ++........++||..++..+..++|.+++.+...-+-...+.+....+..+..|++|..+|.+.+
T Consensus 249 ~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i 328 (1228)
T KOG0055|consen 249 KKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETI 328 (1228)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHh
Confidence 3333333322 22 222234456678888888888999999998886666666677777778899999999999999998
Q ss_pred cccc-cccccccccCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCc
Q 000432 611 QEDE-IQRDAVEYVPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAG 689 (1513)
Q Consensus 611 ~~~e-~~~~~~~~~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G 689 (1513)
+..+ .+.............+.|+|+||+|+||..++.++|+|+||+|++|+.+|+||+|||||||++++|.|+|+|++|
T Consensus 329 ~~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G 408 (1228)
T KOG0055|consen 329 DRKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSG 408 (1228)
T ss_pred cCCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCc
Confidence 7543 333221222333456789999999999988778999999999999999999999999999999999999999999
Q ss_pred EEEECCe-------------EEEEcCCCcccCccHHHHHccCCCC-CchHHHHHHHHHhcHHHHhhccCCCCccccCCCC
Q 000432 690 TVKISGT-------------KAYVPQSPWILTGNIRENILFGNQY-DSCKYDRTVEACALVKDFELFASGDLTEIGERGI 755 (1513)
Q Consensus 690 ~i~~~g~-------------~ayv~Q~~~l~~~ti~eNI~fg~~~-~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~ 755 (1513)
+|.+||. +|.|.|+|-+|++||+|||+||+|. +.++..++++++...+.+..||+|++|.+||+|.
T Consensus 409 ~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~ 488 (1228)
T KOG0055|consen 409 EVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGV 488 (1228)
T ss_pred eEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCC
Confidence 9999983 5999999999999999999999975 4566777777777788899999999999999999
Q ss_pred CCChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEE
Q 000432 756 NMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQ 835 (1513)
Q Consensus 756 ~LSGGQkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~ 835 (1513)
.|||||||||||||||.+||+||||||||||||++. +++.+++++...+|||.|+||||++++++||+|++|++|+|+|
T Consensus 489 qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~s-e~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE 567 (1228)
T KOG0055|consen 489 QLSGGQKQRIAIARALVRNPKILLLDEATSALDAES-ERVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVE 567 (1228)
T ss_pred CCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHH-HHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEE
Confidence 999999999999999999999999999999999998 5566899999999999999999999999999999999999999
Q ss_pred ecChHHHHhcCccHHHHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhhhcCCCch
Q 000432 836 AGRFEELLKQNIGFEVLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITEKGGKLV 915 (1513)
Q Consensus 836 ~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (1513)
.|+|+||++.+|.|.++++.+.......+..+..+.. +.... +.....+..... +............+.++.....
T Consensus 568 ~G~h~ELi~~~G~Y~~lv~~Q~~~~~~~~~~~~~~~~-~~~~~-s~~~s~~~~~~~-~~~~~~~~~~~~~~~e~~~~~~- 643 (1228)
T KOG0055|consen 568 QGTHDELIALGGIYSSLVRLQELEKAAEDEEEEESLK-EERSR-SLKSSSSSPSLS-RGSNRSNLLSVKPEGEDPEEPV- 643 (1228)
T ss_pred ecCHHHHHhccchHHHHHHHHhhhhhhhccccccchh-hhhhh-cccccccccccc-CCcccccccccccccccccccc-
Confidence 9999999999999999998875433211100000000 00000 000000000000 0000000000000000000011
Q ss_pred hhhHhhhcccchHHHHHHHHhhhhhhHHHHHHHHHHHH----HHHHHhhhhhhc-ccCCCCCCCCCCchhhHHHHHHHHH
Q 000432 916 QEEEREKGSIGKEVYWSYLTAVKGGALVPIILLAQSSF----QVLQVASNYWMA-WASPPTSDGEPALGMNIVLLVYTLL 990 (1513)
Q Consensus 916 ~~e~~~~g~v~~~~~~~y~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~vy~~l 990 (1513)
.+++ -.+++....+|.++. |.++.+.+++.++. .++.+.....+. +..++.. .-......|.++|+++
T Consensus 644 ~~~~---~~~s~~~i~k~~~pe--~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~--~~~~~~~~~al~f~~l 716 (1228)
T KOG0055|consen 644 SEED---EKVSFWRIFKLNKPE--WPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDD--ELKREVRAWALIFLGL 716 (1228)
T ss_pred cccc---ccccHHHHHHhccch--hHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChH--HHHHHHHHHHHHHHHH
Confidence 1111 234444444554442 22222222222222 222222233333 2211100 0111234588999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccc--cChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHH
Q 000432 991 TVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDS--TPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQ 1068 (1513)
Q Consensus 991 ~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~--~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~ 1068 (1513)
++++.++.+++.+++.+.|.+..+++|.++|+++++.++.|||. +. |+|.+|+.+|...+...+...+..++.++..
T Consensus 717 ~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~ 795 (1228)
T KOG0055|consen 717 GIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDRLSLVVQNIAA 795 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999995 56 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHH
Q 000432 1069 ILGTIGVMSQVAWQVFVIFI---PVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNA 1145 (1513)
Q Consensus 1069 ~~~~l~v~~~~~~~l~lv~i---p~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~ 1145 (1513)
++..+++.++++|.++++++ |++++..+.+.++.... .+..............|++++++||++|+.|++|.+.
T Consensus 796 ~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~---~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~ 872 (1228)
T KOG0055|consen 796 VIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGF---SKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMEL 872 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHH
Confidence 99999999999999988654 55555555555444332 2222222334456789999999999999999999999
Q ss_pred HHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1146 NLSLIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLVVL-VTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAE 1224 (1513)
Q Consensus 1146 ~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~-~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le 1224 (1513)
+.+.++...+..+..........-.-+.+..++.+++..+. .++.+|.+++..+...+.-...-...+........+.-
T Consensus 873 y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ 952 (1228)
T KOG0055|consen 873 YKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDIS 952 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHH
Confidence 99988887776655443322222222222222223333332 33567888887765555444433444555666777888
Q ss_pred HHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCceEEEEEEEEEEcCCC-CcceeeeeEEeeCCcEEEEEcCCCCCHH
Q 000432 1225 NKMISVERILQYSNLPSEAPLVTEECRPPSNWPDVGTISFHNLQIRYAEHL-PSVLKNISCTFPGRKKVGVVGRTGSGKS 1303 (1513)
Q Consensus 1225 ~~~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~-~~vLk~is~~I~~GekvgIVGrTGSGKS 1303 (1513)
.+..|+.+++++++.+++-+...+.. ....+.+|+|+|+||+|+||... .+||+|+|++|++||++|+|||||||||
T Consensus 953 ka~~Aa~~iF~i~dr~~~i~~~~~~~--~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKS 1030 (1228)
T KOG0055|consen 953 KAKIAAGSIFEILDRKPTIDPDSTSG--GKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKS 1030 (1228)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCCCC--CccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHH
Confidence 99999999999998776432211111 11124689999999999996431 2699999999999999999999999999
Q ss_pred HHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCC-CCCCHHHHHHHHHHcCCcHHHH
Q 000432 1304 TLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPL-VQYSDKQVWEALDKCQLGDLVR 1382 (1513)
Q Consensus 1304 TLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~-~~~sdeei~~aL~~~~l~~~I~ 1382 (1513)
|++.+|.|+|+|.+|.|.|||+||+++++++||++|++|.|||.||++||||||.++ .+++++||.+|++.+++|+||.
T Consensus 1031 TvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~ 1110 (1228)
T KOG0055|consen 1031 TVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFIS 1110 (1228)
T ss_pred HHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHh
Confidence 999999999999999999999999999999999999999999999999999999987 4589999999999999999999
Q ss_pred hhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh
Q 000432 1383 AKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID 1462 (1513)
Q Consensus 1383 ~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~ 1462 (1513)
+||+||||.|||+|.+||||||||||||||++||||||+|||||||||.++|+.+|++|++...+||+|+|||||+||++
T Consensus 1111 sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqn 1190 (1228)
T KOG0055|consen 1111 SLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQN 1190 (1228)
T ss_pred cCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEEEeCCEEeEecChhHHHhcCChHHHHHHHHHh
Q 000432 1463 SDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIKEYS 1499 (1513)
Q Consensus 1463 ~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~~~~ 1499 (1513)
||.|.|+++|+|+|.|||++|+++ +|.|++|++.+.
T Consensus 1191 aD~I~Vi~~G~VvE~GtH~~L~~~-~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1191 ADVIAVLKNGKVVEQGTHDELLAK-RGIYFRLVQLQS 1226 (1228)
T ss_pred CCEEEEEECCEEEecccHHHHHhC-CCchHHHhhhcc
Confidence 999999999999999999999995 899999998653
No 8
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=8.1e-144 Score=1467.17 Aligned_cols=1180 Identities=17% Similarity=0.199 Sum_probs=867.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 309 FFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQLGLRLR 388 (1513)
Q Consensus 309 ~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir 388 (1513)
.+.+++.++++.++.++..++..+.|++++.++|.+.... . . ..+++.++++.++..++...+.+...+++.++.
T Consensus 55 ~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~--~-~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 129 (1466)
T PTZ00265 55 PASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGE--N-V--NDIIFSLVLIGIFQFILSFISSFCMDVVTTKIL 129 (1466)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc--h-H--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3446777888888899999999999999999999764221 1 1 112223333444455555566667778999999
Q ss_pred HHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 000432 389 AALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFY-SNYMFMLPVQISLAIYILR-TNLGLGSLAALAATL 466 (1513)
Q Consensus 389 ~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~l~~L~-~~lg~~~l~~l~~~~ 466 (1513)
..++..+|+|.++++..++++.++|++.+.++.|++.+.+.+.. +..+...++.++.++++++ ..+.++ ++.+++++
T Consensus 130 ~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~La-lv~l~~~p 208 (1466)
T PTZ00265 130 KTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLT-LCITCVFP 208 (1466)
T ss_pred HHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH-HHHHHHHH
Confidence 99999999999999999999999999999999999999987643 3344444444444443332 222232 33334444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 467 TVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSAFIFW 546 (1513)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~~~~~ 546 (1513)
+++.+...+.++.++..++..+..++..+.+.|.++||++||.|+.|+.+.+++++..+...+...+.....++...+..
T Consensus 209 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~~~~~~~ 288 (1466)
T PTZ00265 209 LIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESLHIGMIN 288 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555566777777788888888889999999999999999999999999999886655444444444333333222211
Q ss_pred --HHHHHHHHHHHHHHHHhcc--------cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 000432 547 --GSPTFISVVTFGACMLLGI--------QLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQ 616 (1513)
Q Consensus 547 --~~p~~v~~~~f~~~~~~~~--------~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~ 616 (1513)
.....+.++++|++++..+ .+++|.+++++........++..+...+..++.+++|.+||.++++.++..
T Consensus 289 ~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii~~~~~~ 368 (1466)
T PTZ00265 289 GFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEIINRKPLV 368 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 1223445667888887754 588888887765555545555666667889999999999999999865432
Q ss_pred cccccccCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEEC-C
Q 000432 617 RDAVEYVPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKIS-G 695 (1513)
Q Consensus 617 ~~~~~~~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~-g 695 (1513)
++.......+ ....|+++|++|+|+...+.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++ |
T Consensus 369 ~~~~~~~~~~-~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i~~g 447 (1466)
T PTZ00265 369 ENNDDGKKLK-DIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEGDIIINDS 447 (1466)
T ss_pred CCCCCCccCC-CCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCCeEEEeCC
Confidence 2111111111 1237999999999985434579999999999999999999999999999999999999999999994 4
Q ss_pred -------------eEEEEcCCCcccCccHHHHHccCCC------------------------------------------
Q 000432 696 -------------TKAYVPQSPWILTGNIRENILFGNQ------------------------------------------ 720 (1513)
Q Consensus 696 -------------~~ayv~Q~~~l~~~ti~eNI~fg~~------------------------------------------ 720 (1513)
.++||+|+|.+|++||+|||.+|..
T Consensus 448 ~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (1466)
T PTZ00265 448 HNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAGDLNDMSN 527 (1466)
T ss_pred cchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccchhhhccc
Confidence 2599999999999999999999742
Q ss_pred ----------------CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCEEEeeCcC
Q 000432 721 ----------------YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLLDDPF 784 (1513)
Q Consensus 721 ----------------~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~illLDep~ 784 (1513)
.++++..++++.+++.+.++.+|+|++|.+|++|.+|||||||||+||||++++|+||||||||
T Consensus 528 ~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~ILlLDEpT 607 (1466)
T PTZ00265 528 TTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKILILDEAT 607 (1466)
T ss_pred ccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcc
Confidence 1224556677777888889999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccccCCEEEEEeCC-------------------------------
Q 000432 785 SAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPAADIILVMENG------------------------------- 831 (1513)
Q Consensus 785 salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~~d~i~vl~~G------------------------------- 831 (1513)
|+||+++++.+. +.+..+. +++|+|+||||++++..||+|++|++|
T Consensus 608 SaLD~~se~~i~-~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (1466)
T PTZ00265 608 SSLDNKSEYLVQ-KTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNKNNKDDN 686 (1466)
T ss_pred cccCHHHHHHHH-HHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccccccccccccccccccc
Confidence 999999987775 5676664 489999999999999999999999986
Q ss_pred ----------------eEEEecChHHHHh-cCccHHHHHHhhhhhhhhhc-c-cccCCCCCCCCCCCCccCc--Ccccc-
Q 000432 832 ----------------RIAQAGRFEELLK-QNIGFEVLVGAHSQALESVL-T-VETSSRTSQDPTPESELNS--DSTSN- 889 (1513)
Q Consensus 832 ----------------~i~~~g~~~~l~~-~~~~~~~l~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~--~~~~~- 889 (1513)
+|+|+|+|+||++ .++.|..+++.+........ . .+.....+.+......... +....
T Consensus 687 ~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 766 (1466)
T PTZ00265 687 NNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSAYKDSERGYDPDEMNGN 766 (1466)
T ss_pred cccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhcccccccccccccccccccccccccccccccccccccc
Confidence 5999999999998 68999999976532211100 0 0000000000000000000 00000
Q ss_pred --ccccccCCCccchhh-h--hhhhcCCCchhhhHh----hhcccchHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhh
Q 000432 890 --VKLVHSQHDSEHELS-L--EITEKGGKLVQEEER----EKGSIGKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVAS 960 (1513)
Q Consensus 890 --~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~e~~----~~g~v~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~ 960 (1513)
............... . ++.....+....+++ ......+..++++++......+ +.+++.++..++....
T Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 844 (1466)
T PTZ00265 767 SKHENESASNKKSCKMSDENASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKDVT--IIALSILVAGGLYPVF 844 (1466)
T ss_pred ccccccccccccccccccccccchhccccchhhhhccccccccchhHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH
Confidence 000000000000000 0 000000000000000 0011123334444443332222 1222223333333334
Q ss_pred hhhhcccCCCCCCCC-CCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccc--cCh
Q 000432 961 NYWMAWASPPTSDGE-PALGMNIVLLVYTLLTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDS--TPT 1037 (1513)
Q Consensus 961 ~~~l~~~~~~~~~~~-~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~--~~~ 1037 (1513)
++.++...+...... .......+.+++++++++..++.+++.++..+.+.+...++|.++|+++++.|++|||+ +++
T Consensus 845 ~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~~~~~~fd~~~~~~ 924 (1466)
T PTZ00265 845 ALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILYQEISFFDQDKHAP 924 (1466)
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCCCCH
Confidence 444443222110000 01123456677788888889999999999999999999999999999999999999986 899
Q ss_pred hHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHH----
Q 000432 1038 GRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVIFIPVTGICIWYQQYYIP--TARELARL---- 1111 (1513)
Q Consensus 1038 G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~--~~r~l~rl---- 1111 (1513)
|++++|+++|++.+...+...+..++..++.+++.++++++.+|.++++++|++++.........+ ..++.++.
T Consensus 925 G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1004 (1466)
T PTZ00265 925 GLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIRARLTANKDVEKKEINQ 1004 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 999999999999999999999999999999999999999999999888776655443322111111 11111111
Q ss_pred ---------HHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1112 ---------AEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFS 1182 (1513)
Q Consensus 1112 ---------~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~ 1182 (1513)
.....+...+.++|++.|++|||+|+.|++|.+++.+..+...+..........++....+++..+..+++
T Consensus 1005 ~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1084 (1466)
T PTZ00265 1005 PGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSFA 1084 (1466)
T ss_pred cccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22334567889999999999999999999999999988887776665555444444444444444433333
Q ss_pred HHHH-HHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCC-CCCCCCCc
Q 000432 1183 LVVL-VTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLVTEECRP-PSNWPDVG 1260 (1513)
Q Consensus 1183 ~~~~-~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~~~~~~-~~~wp~~g 1260 (1513)
.++. ..+..|.++.|.+..++.+.+....++..+...+.+++....+.+|+.++++.+++.+.......+ +...+..|
T Consensus 1085 ~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~g 1164 (1466)
T PTZ00265 1085 YWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKNDIKG 1164 (1466)
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCCcccccccCCCCCc
Confidence 3332 335588999998877776655444556677888899999999999999999876543211111111 00123458
Q ss_pred eEEEEEEEEEEcCC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC------------------------
Q 000432 1261 TISFHNLQIRYAEH-LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP------------------------ 1315 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep------------------------ 1315 (1513)
.|+|+||+|+|+++ ..+||+|+||+|+|||+|||||+||||||||+++|+|+|+|
T Consensus 1165 ~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~ 1244 (1466)
T PTZ00265 1165 KIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQG 1244 (1466)
T ss_pred eEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccc
Confidence 89999999999743 23699999999999999999999999999999999999999
Q ss_pred ------------------------------CCcEEEEcCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCC-CCCC
Q 000432 1316 ------------------------------TMGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPL-VQYS 1364 (1513)
Q Consensus 1316 ------------------------------~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~-~~~s 1364 (1513)
++|+|+|||+||+++++++||++|+||||||+||+|||||||.++ ++++
T Consensus 1245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~at 1324 (1466)
T PTZ00265 1245 DEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDAT 1324 (1466)
T ss_pred ccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccccccHHHHHhcCCCCCC
Confidence 699999999999999999999999999999999999999999887 4699
Q ss_pred HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHh
Q 000432 1365 DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQE 1444 (1513)
Q Consensus 1365 deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~ 1444 (1513)
||||++|++.++++|||.+||+||||.|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.|+++|++.
T Consensus 1325 ~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~ 1404 (1466)
T PTZ00265 1325 REDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDI 1404 (1466)
T ss_pred HHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred c--CCcEEEEeccChhhHhhcCEEEEEeC----CEEe-EecChhHHHhcCChHHHHHHHHH
Q 000432 1445 F--KDRTVVTIAHRIHTVIDSDLVLVLSD----GRIA-EYDSPTKLLEREDSFFSQLIKEY 1498 (1513)
Q Consensus 1445 ~--~~~TvI~IAHRl~ti~~~DrIlVLd~----G~Iv-E~Gtp~eLl~~~~~~f~~l~~~~ 1498 (1513)
. +++|+|+||||++|+++||+|+||++ |+++ |.|+|+||+++++|.|++|++.+
T Consensus 1405 ~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~~~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1405 KDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSVQDGVYKKYVKLA 1465 (1466)
T ss_pred hccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhcCCChHHHHHhhc
Confidence 4 69999999999999999999999999 9954 99999999985579999999764
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.1e-97 Score=894.51 Aligned_cols=572 Identities=22% Similarity=0.342 Sum_probs=494.6
Q ss_pred chHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCC-CCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 926 GKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSD-GEPALGMNIVLLVYTLLTVGSSLCVLLRAML 1004 (1513)
Q Consensus 926 ~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~ 1004 (1513)
.++..+.|.++..++.... .++.++.....++.|+++.-.+|.... .+..........+..++.++++++.++|.++
T Consensus 134 ~~~rl~~l~~~~~~~l~~a--~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~ 211 (716)
T KOG0058|consen 134 LLKRLLGLLKPEWKWLVAA--FVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGL 211 (716)
T ss_pred HHHHHHHHhchhHHHHHHH--HHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556777777655443322 223344445566677666533332211 1111223445667778888999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000432 1005 VAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVF 1084 (1513)
Q Consensus 1005 ~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~ 1084 (1513)
+.+.+.++..++|..+|+++++..++|||.+.+|+|+||+++|...+...++..+...+.+.++.++.+++|++.+|.+.
T Consensus 212 ~~~a~~rv~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Lt 291 (716)
T KOG0058|consen 212 LQYAGERVVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLT 291 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHH
Q 000432 1085 VIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAM 1164 (1513)
Q Consensus 1085 lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~ 1164 (1513)
++.+..+++...+.++|.+..|++.+..+++-+...+...|.+++++|||+|+.|++..+++.+.++.-.+.......+.
T Consensus 292 lv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~ 371 (716)
T KOG0058|consen 292 LVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAY 371 (716)
T ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 98888888888888889999999999999999999999999999999999999999888888777777666555544444
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 000432 1165 EWLCFRLNLLSNFVFAFSLVV-LVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEA 1243 (1513)
Q Consensus 1165 ~wl~~~l~~~~~~~~~~~~~~-~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~ 1243 (1513)
..+....++..++....++++ ..++..|.+++|.+..++.|...+...+.++...+.++.+...|.+|++||++.+|.-
T Consensus 372 ~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i 451 (716)
T KOG0058|consen 372 GIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRI 451 (716)
T ss_pred hHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCC
Confidence 444444555555544444443 2456789999999999999999999999999999999999999999999999987664
Q ss_pred CCcccCCCCCCCCCCCceEEEEEEEEEEcCCC-CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEE
Q 000432 1244 PLVTEECRPPSNWPDVGTISFHNLQIRYAEHL-PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIII 1322 (1513)
Q Consensus 1244 ~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~-~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~I 1322 (1513)
+.. +...| . ..+|.|+|+||+|+|+... -+||||+||+|+|||+||+||||||||||++++|.|+|+|++|+|++
T Consensus 452 ~~~--G~~~p-~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~Ill 527 (716)
T KOG0058|consen 452 PLT--GTLAP-D-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILL 527 (716)
T ss_pred CCC--Ccccc-c-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEE
Confidence 432 11112 2 4689999999999997542 36999999999999999999999999999999999999999999999
Q ss_pred cCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCC-CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCCh
Q 000432 1323 DNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPL-VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSV 1401 (1513)
Q Consensus 1323 DGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~-~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSg 1401 (1513)
||+||++++.+.||++||+|.|||+||+|||||||.++ .+.+||||.+|+++|+.||||.++|+||||.|||+|..|||
T Consensus 528 DG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSG 607 (716)
T KOG0058|consen 528 DGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSG 607 (716)
T ss_pred CCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccc
Confidence 99999999999999999999999999999999999875 47999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChh
Q 000432 1402 GQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPT 1481 (1513)
Q Consensus 1402 GQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~ 1481 (1513)
||||||||||||+|||+||||||||||||.++|..+|++|.+..+++|||+|||||+||+.||+|+|+|+|+|+|.|+|+
T Consensus 608 GQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~ 687 (716)
T KOG0058|consen 608 GQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHD 687 (716)
T ss_pred hHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHhhccc
Q 000432 1482 KLLEREDSFFSQLIKEYSMRSQ 1503 (1513)
Q Consensus 1482 eLl~~~~~~f~~l~~~~~~~~~ 1503 (1513)
||+++++|.|++|++++.....
T Consensus 688 eLl~~~~gly~~Lv~~q~~~~~ 709 (716)
T KOG0058|consen 688 ELLSKPNGLYAKLVQRQLDSGE 709 (716)
T ss_pred HHhhCcccHHHHHHHHhcccCC
Confidence 9999988999999998765443
No 10
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=7.4e-89 Score=859.30 Aligned_cols=566 Identities=25% Similarity=0.353 Sum_probs=508.1
Q ss_pred chHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 926 GKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLV 1005 (1513)
Q Consensus 926 ~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~ 1005 (1513)
++..++.++...+. .+.-+++..++.+++.+++|++.++..|.................++++++...++.++|.++.
T Consensus 141 ~~~~f~~~~~~~~~--~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~ 218 (709)
T COG2274 141 GLSWFIPLLFKYRR--LLFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLI 218 (709)
T ss_pred chHhHHHHHHhhHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555553332 2334556677888999999999998888754322222334555666777888899999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000432 1006 AITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFV 1085 (1513)
Q Consensus 1006 ~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~l 1085 (1513)
.+.+.+....+-.++++|++++|++||+++++|++++|+. |++.|..++...+...+..++.++..+++|++++|++++
T Consensus 219 ~~~~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~l 297 (709)
T COG2274 219 AHLGKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTL 297 (709)
T ss_pred HHHHHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999995 899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHH
Q 000432 1086 IFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAME 1165 (1513)
Q Consensus 1086 v~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1165 (1513)
+.+..++++..+.-...+..|+..+...+..+...+++.|++.|++|||+.+.|++|..++++..+++.+..+.......
T Consensus 298 i~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~ 377 (709)
T COG2274 298 IVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLAL 377 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 88777777766666666777777777777788889999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH-HhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 000432 1166 WLCFRLNLLSNFVFAFSLVVLV-TLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAP 1244 (1513)
Q Consensus 1166 wl~~~l~~~~~~~~~~~~~~~~-~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~ 1244 (1513)
|......++..+....++++.+ .+..|.++.|.+.++.+....++.++..++..+.+++....+.||+.++++.|+|.+
T Consensus 378 ~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~ 457 (709)
T COG2274 378 ILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQE 457 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 9888888888877766666653 466889999999999999999999999999999999999999999999999998864
Q ss_pred CcccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcC
Q 000432 1245 LVTEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDN 1324 (1513)
Q Consensus 1245 ~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDG 1324 (1513)
.. ..+...|+..|+|+|+||+|+|+++.|++|+|+|++|+|||+|||||+||||||||+++|.|+|+|++|+|++||
T Consensus 458 ~~---~~~~~~~~~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg 534 (709)
T COG2274 458 GD---KTLIHLPKLQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDG 534 (709)
T ss_pred cc---cccccccccCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 32 223455677899999999999999988999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCChHHhhhceEEEcCCCccccCcHhhccCCCC-CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhH
Q 000432 1325 VDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLV-QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQ 1403 (1513)
Q Consensus 1325 vdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~-~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQ 1403 (1513)
+|++++++++||++|++||||++||+|||||||+..+ +.+|||+++|++.++++|||.++|+||||+|||+|.||||||
T Consensus 535 ~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQ 614 (709)
T COG2274 535 VDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQ 614 (709)
T ss_pred EeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHH
Confidence 9999999999999999999999999999999998764 688999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHH
Q 000432 1404 RQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKL 1483 (1513)
Q Consensus 1404 RQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eL 1483 (1513)
||||+|||||++||+||||||||||||++||+.|++.|.+...+||+|+||||++|+++||||+|||+|+|+|.|||+||
T Consensus 615 rQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~el 694 (709)
T COG2274 615 RQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEEL 694 (709)
T ss_pred HHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCChHHHHHHHHH
Q 000432 1484 LEREDSFFSQLIKEY 1498 (1513)
Q Consensus 1484 l~~~~~~f~~l~~~~ 1498 (1513)
++. +|.|+++++.+
T Consensus 695 l~~-~g~y~~l~~~q 708 (709)
T COG2274 695 LAQ-GGLYARLYQQQ 708 (709)
T ss_pred HHh-cChHHHHHhcc
Confidence 998 89999998764
No 11
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=3.3e-84 Score=825.34 Aligned_cols=545 Identities=26% Similarity=0.394 Sum_probs=462.8
Q ss_pred HHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 000432 946 ILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVH 1025 (1513)
Q Consensus 946 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll 1025 (1513)
.+++.++...+.+..++++.+..+... ........+...++++.++..++.++..++..+.+.+...++|.+++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~lr~~~~~~l~ 96 (567)
T COG1132 19 AILLLLLSALLSLLLPLLIGRIIDALL--ADLGELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADLRRDLFEKLL 96 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455556777777777776655432 011222344455556666777888888888888889999999999999999
Q ss_pred cCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1026 RAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVIFIPVTGICIWYQQYYIPTA 1105 (1513)
Q Consensus 1026 ~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~~~ 1105 (1513)
++|+++|+++++|++++|+++|++.++..+......+...++.+++.+++++..+|.++++++...+++.+....+.+..
T Consensus 97 ~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~ 176 (567)
T COG1132 97 RLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLALILLLILPLLALVLSLLARKS 176 (567)
T ss_pred hCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988866666678889999999999999998877766666666666666666
Q ss_pred HHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1106 RELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLVV 1185 (1513)
Q Consensus 1106 r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~ 1185 (1513)
++..+......+.+.+.+.|+++|+++||+|+.++...+++.+..+...+...........+.....++..+......++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (567)
T COG1132 177 RKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLSSLGTVLVLAL 256 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888999999999999999999999999776666666655555444434444444444444444433333333
Q ss_pred H-HHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCceEEE
Q 000432 1186 L-VTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLVTEECRPPSNWPDVGTISF 1264 (1513)
Q Consensus 1186 ~-~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~f 1264 (1513)
. ..+..+.++.|.+..++.|...+..++..+...+..++....|.||+.++++.+++... ...+ .++..|.|+|
T Consensus 257 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~---~~~~--~~~~~~~I~f 331 (567)
T COG1132 257 GGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVED---PPDP--LKDTIGSIEF 331 (567)
T ss_pred HHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC---CCCC--CCCCCCeEEE
Confidence 2 23456779999999999999999999999999999999999999999999987654221 1111 3345688999
Q ss_pred EEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcC
Q 000432 1265 HNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQ 1344 (1513)
Q Consensus 1265 ~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQ 1344 (1513)
+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|+|||+||+++++.+||++|++|||
T Consensus 332 ~~vsf~y~~~-~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr~~I~~V~Q 410 (567)
T COG1132 332 ENVSFSYPGK-KPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLRKRIGIVSQ 410 (567)
T ss_pred EEEEEEcCCC-CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHHHhccEEcc
Confidence 9999999864 469999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCcHhhccCCCCC-CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000432 1345 DPTLFDGTVRGNLDPLVQ-YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLD 1423 (1513)
Q Consensus 1345 dp~LF~gTIR~NLdp~~~-~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLD 1423 (1513)
||+||+||||+||+++.+ +||||+++|++.++++|+|+++|+||||.|||+|.+||||||||+|||||++|+|+|||||
T Consensus 411 d~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~~~~ILILD 490 (567)
T COG1132 411 DPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLRNPPILILD 490 (567)
T ss_pred cceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 999999999999998864 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHHHHHHHh
Q 000432 1424 EATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIKEYS 1499 (1513)
Q Consensus 1424 EaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~~~~ 1499 (1513)
||||++|++||+.||+++++..+++|+|+||||++|+++||+|+|||+|+|+|+|+|+||+++ +|.|++|++++.
T Consensus 491 EaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~-~g~y~~l~~~~~ 565 (567)
T COG1132 491 EATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAK-GGLYARLYQAQG 565 (567)
T ss_pred ccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHc-CCHHHHHHHHhh
Confidence 999999999999999999988899999999999999999999999999999999999999998 899999998765
No 12
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=1.5e-82 Score=814.62 Aligned_cols=565 Identities=18% Similarity=0.236 Sum_probs=460.9
Q ss_pred hHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCc-hhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 927 KEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPAL-GMNIVLLVYTLLTVGSSLCVLLRAMLV 1005 (1513)
Q Consensus 927 ~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~vy~~l~~~~~~~~~~~~~~~ 1005 (1513)
++.+++|+++.++... +.+++.++..++.+..++.+++..|.......+. ....++.+++++.++..++.+++.++.
T Consensus 10 ~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (588)
T PRK11174 10 TRWLKQQSKPAKRWLN--LSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVG 87 (588)
T ss_pred hHHHHHHhHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777776554433 3344555666677777777776655321001111 123344455566667788888999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000432 1006 AITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFV 1085 (1513)
Q Consensus 1006 ~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~l 1085 (1513)
...+.+...+++.+++++++++|++||++.++|++++|+++|++.++..+...+..++..++.+++.++++++++|++++
T Consensus 88 ~~~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 167 (588)
T PRK11174 88 FKAGQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAAGL 167 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHH
Q 000432 1086 IFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAME 1165 (1513)
Q Consensus 1086 v~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1165 (1513)
+++..+++..++...+.+..++..+......+.+.+++.|+++|+++||+|++|+++.+++.+..+...+..........
T Consensus 168 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (588)
T PRK11174 168 ILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAF 247 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76665555555556666666777777777788899999999999999999999999999888887777666555444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccCHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000432 1166 WLCFRLNLLSNFVFAFSLVVLVTLPEGIINPSI---------AGLAVTYGINLNVLQASIIWNICNAENKMISVERILQY 1236 (1513)
Q Consensus 1166 wl~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~---------~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~ 1236 (1513)
+......++..+...+..++......|.++.|. +.+++.+...+..++..+...+..+.....+.+|+.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~ 327 (588)
T PRK11174 248 LSSAVLEFFASISIALVAVYFGFSYLGELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVTF 327 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444433222221221111125555443 22333556677788888989999999999999999999
Q ss_pred cCCCCCCCCcccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCC
Q 000432 1237 SNLPSEAPLVTEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPT 1316 (1513)
Q Consensus 1237 ~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~ 1316 (1513)
++.|++.+.. +..+ ...+..+.|+|+||+|.|.++ ++||+|+||+|+|||++||||+||||||||+++|+|+| |+
T Consensus 328 l~~~~~~~~~--~~~~-~~~~~~~~i~~~~vsf~~~~~-~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~ 402 (588)
T PRK11174 328 LETPLAHPQQ--GEKE-LASNDPVTIEAEDLEILSPDG-KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY 402 (588)
T ss_pred HcCCCcccCC--Cccc-cCCCCCceEEEEeeEEeccCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC
Confidence 9877653211 1111 111234679999999988655 46999999999999999999999999999999999999 99
Q ss_pred CcEEEEcCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCC-CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccC
Q 000432 1317 MGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPL-VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAEN 1395 (1513)
Q Consensus 1317 ~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~-~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~ 1395 (1513)
+|+|.+||+|+++++.+++|++|+||||||+||+|||||||..+ ++++|||+++|++.|+++++|+++|+||||.|||+
T Consensus 403 ~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~ 482 (588)
T PRK11174 403 QGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQ 482 (588)
T ss_pred CcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccC
Confidence 99999999999999999999999999999999999999999987 46999999999999999999999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEe
Q 000432 1396 GENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIA 1475 (1513)
Q Consensus 1396 G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~Iv 1475 (1513)
|.||||||||||+||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++.+||+|+||++|+|+
T Consensus 483 G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~ 562 (588)
T PRK11174 483 AAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIV 562 (588)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEe
Confidence 99999999999999999999999999999999999999999999999988999999999999999999999999999999
Q ss_pred EecChhHHHhcCChHHHHHHHHHh
Q 000432 1476 EYDSPTKLLEREDSFFSQLIKEYS 1499 (1513)
Q Consensus 1476 E~Gtp~eLl~~~~~~f~~l~~~~~ 1499 (1513)
|.|+|+||+++ ++.|++|++.+.
T Consensus 563 e~G~~~eL~~~-~~~y~~l~~~q~ 585 (588)
T PRK11174 563 QQGDYAELSQA-GGLFATLLAHRQ 585 (588)
T ss_pred ecCCHHHHHhc-chHHHHHHHHhh
Confidence 99999999987 789999998654
No 13
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.8e-81 Score=814.88 Aligned_cols=561 Identities=20% Similarity=0.230 Sum_probs=474.6
Q ss_pred hHHHHHH-HHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 927 KEVYWSY-LTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLV 1005 (1513)
Q Consensus 927 ~~~~~~y-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~ 1005 (1513)
++.+.++ ++..++. +..++++.++..++.++.|+.++...|.............++++++++.++..++.+++.++.
T Consensus 123 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (686)
T TIGR03797 123 LRDLLRFALRGARRD--LLAILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAV 200 (686)
T ss_pred HHHHHHHHHhhHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444 4433332 234455666777788888888876666432111111223345556666777888999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000432 1006 AITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFV 1085 (1513)
Q Consensus 1006 ~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~l 1085 (1513)
...+.+...+++.+++++++++|++||++.++|++++|++ |++.++..+...+...+..++.+++.++++++++|++++
T Consensus 201 ~~~~~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 279 (686)
T TIGR03797 201 LRLETRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWKLAL 279 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999997 799999988888888888888888888999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHH
Q 000432 1086 IFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAME 1165 (1513)
Q Consensus 1086 v~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1165 (1513)
+++.++++++.+...+.+..+...+......+...+++.|+++|+.+||+|+.|+++.+++.+..+...+..+.......
T Consensus 280 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (686)
T TIGR03797 280 VAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIEN 359 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666555555555555555555555566677889999999999999999999999999999988888888777777777
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 000432 1166 WLCFRLNLLSNFVFAFSLVVL-VTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAP 1244 (1513)
Q Consensus 1166 wl~~~l~~~~~~~~~~~~~~~-~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~ 1244 (1513)
|......++..+...+..++. ..+..|.++.|.+..+.++...+..++..+...+.+++....+.+|+.++++.|+|.+
T Consensus 360 ~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~ 439 (686)
T TIGR03797 360 LLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVD 439 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 776666665554443333333 3345889999999999999999999999999999999999999999999998776643
Q ss_pred CcccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcC
Q 000432 1245 LVTEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDN 1324 (1513)
Q Consensus 1245 ~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDG 1324 (1513)
.. ..+ ..+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|++||
T Consensus 440 ~~---~~~--~~~~~~~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg 514 (686)
T TIGR03797 440 EA---KTD--PGKLSGAIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDG 514 (686)
T ss_pred cC---cCC--CCCCCceEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECC
Confidence 11 111 1134578999999999986667899999999999999999999999999999999999999999999999
Q ss_pred eeCCCCChHHhhhceEEEcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHH
Q 000432 1325 VDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQR 1404 (1513)
Q Consensus 1325 vdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQR 1404 (1513)
+|+++++.+++|++|++|||||++|+|||||||.++++++|+|+++|++.++++++++++|+||||.+||+|.|||||||
T Consensus 515 ~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQr 594 (686)
T TIGR03797 515 QDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQR 594 (686)
T ss_pred EEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHH
Confidence 99999999999999999999999999999999998766999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHH
Q 000432 1405 QLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1405 Qrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
|||+||||++++|+|||||||||+||++||+.|++.|++. ++|+|+||||++++.+||+|+|||+|+|+|.|+|+||+
T Consensus 595 QRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll 672 (686)
T TIGR03797 595 QRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELM 672 (686)
T ss_pred HHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHH
Confidence 9999999999999999999999999999999999999886 68999999999999999999999999999999999999
Q ss_pred hcCChHHHHHHHHH
Q 000432 1485 EREDSFFSQLIKEY 1498 (1513)
Q Consensus 1485 ~~~~~~f~~l~~~~ 1498 (1513)
++ +|.|++|++++
T Consensus 673 ~~-~~~y~~l~~~q 685 (686)
T TIGR03797 673 AR-EGLFAQLARRQ 685 (686)
T ss_pred hC-CcHHHHHHHhc
Confidence 87 79999998753
No 14
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1e-81 Score=818.12 Aligned_cols=560 Identities=20% Similarity=0.289 Sum_probs=466.5
Q ss_pred hHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 927 KEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLVA 1006 (1513)
Q Consensus 927 ~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~ 1006 (1513)
+..+++|+++.+.. +...+++.++..++.+..|++++...|..............+.+++++.++..++.+++.++..
T Consensus 149 ~~~l~~~~~~~~~~--l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 226 (711)
T TIGR00958 149 LFRLLGLSGRDWPW--LISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFN 226 (711)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456666644332 2334455566777788888888766554321111111223445566666778888889999999
Q ss_pred HHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000432 1007 ITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVI 1086 (1513)
Q Consensus 1007 ~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv 1086 (1513)
+.+.+...++|.++++++++.|++||+++++|+++||+++|++.++..+...+..++.+++.+++.+++++..+|+++++
T Consensus 227 ~~~~~~~~~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~ 306 (711)
T TIGR00958 227 YTMARINLRIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMV 306 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHH
Q 000432 1087 FIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEW 1166 (1513)
Q Consensus 1087 ~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~w 1166 (1513)
++..+++..++...+.+..++..+...+..+...+++.|+++|+++||+|+.|+++.+++.+..++..+...........
T Consensus 307 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (711)
T TIGR00958 307 TLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAG 386 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666666666777777777777777778888899999999999999999999998888888887766655444333222
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 000432 1167 LCFRLNLLSNFVFAFSLVV-LVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPL 1245 (1513)
Q Consensus 1167 l~~~l~~~~~~~~~~~~~~-~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~ 1245 (1513)
......++..+...+...+ ...+..|.+++|.+..++.|...+..++..+...+.++++...+.+|+.++++.+++.+.
T Consensus 387 ~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~ 466 (711)
T TIGR00958 387 YLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPL 466 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 2222222222222222222 223458899999999999999999999999999999999999999999999987665432
Q ss_pred cccCCCCCCCCCCCceEEEEEEEEEEcCC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcC
Q 000432 1246 VTEECRPPSNWPDVGTISFHNLQIRYAEH-LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDN 1324 (1513)
Q Consensus 1246 ~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDG 1324 (1513)
. . ....++..|.|+|+||+|+|+++ .+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||
T Consensus 467 ~--~--~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg 542 (711)
T TIGR00958 467 T--G--TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDG 542 (711)
T ss_pred C--C--CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECC
Confidence 1 1 11123456889999999999753 35799999999999999999999999999999999999999999999999
Q ss_pred eeCCCCChHHhhhceEEEcCCCccccCcHhhccCCC-CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhH
Q 000432 1325 VDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPL-VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQ 1403 (1513)
Q Consensus 1325 vdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~-~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQ 1403 (1513)
+|+++++.+++|++|++|||||++|+|||||||... ++++||++++|++.++++++++++|+||||.+||+|.+|||||
T Consensus 543 ~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQ 622 (711)
T TIGR00958 543 VPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQ 622 (711)
T ss_pred EEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHH
Confidence 999999999999999999999999999999999865 4689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHH
Q 000432 1404 RQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKL 1483 (1513)
Q Consensus 1404 RQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eL 1483 (1513)
|||||||||++++|+|||||||||+||++||+.|++ ....+++|+|+||||++++..||+|+|||+|+|+|.|+|+||
T Consensus 623 kQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL 700 (711)
T TIGR00958 623 KQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQL 700 (711)
T ss_pred HHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHH
Confidence 999999999999999999999999999999999999 344589999999999999999999999999999999999999
Q ss_pred HhcCChHHHHHH
Q 000432 1484 LEREDSFFSQLI 1495 (1513)
Q Consensus 1484 l~~~~~~f~~l~ 1495 (1513)
+++ ++.|++|+
T Consensus 701 ~~~-~~~y~~lv 711 (711)
T TIGR00958 701 MED-QGCYKHLV 711 (711)
T ss_pred HhC-CCchHhcC
Confidence 987 68998874
No 15
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=5e-81 Score=816.18 Aligned_cols=564 Identities=21% Similarity=0.247 Sum_probs=478.7
Q ss_pred chHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 926 GKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLV 1005 (1513)
Q Consensus 926 ~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~ 1005 (1513)
.++.++.+++..++.. ...+++.++..++.++.|++++...|.............++..++++.++..++.+++.++.
T Consensus 141 ~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (710)
T TIGR03796 141 LLRALWRRLRGSRGAL--LYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYL 218 (710)
T ss_pred cHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777776544332 23445556677777888888887666432111111123344555666677888999999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000432 1006 AITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFV 1085 (1513)
Q Consensus 1006 ~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~l 1085 (1513)
...+.+...+++.+++++++++|++||++.++|++++|+++| +.+...+...+..++..++.+++.++++++++|++++
T Consensus 219 ~~~~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 297 (710)
T TIGR03796 219 RRLQIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTL 297 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998 6788888888888899999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHH
Q 000432 1086 IFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAME 1165 (1513)
Q Consensus 1086 v~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1165 (1513)
+++..++++.++..++.+..++..+......+...+++.|+++|+.+||+++.|+.+.+++.+..++..+..........
T Consensus 298 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (710)
T TIGR03796 298 IGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQ 377 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 87777666666666666666777666777788899999999999999999999999999988888877777666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 000432 1166 WLCFRLNLLSNFVFAFSLVVL-VTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAP 1244 (1513)
Q Consensus 1166 wl~~~l~~~~~~~~~~~~~~~-~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~ 1244 (1513)
+......++..+...+..++. ..+..|.++.|.+..++++...+..++..+...+.+++....+++|+.++++.|+|.+
T Consensus 378 ~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~ 457 (710)
T TIGR03796 378 ILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPL 457 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 666655555554433333332 3345889999999999999999999999999999999999999999999998877653
Q ss_pred CcccC--C-CCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEE
Q 000432 1245 LVTEE--C-RPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSII 1321 (1513)
Q Consensus 1245 ~~~~~--~-~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~ 1321 (1513)
..... . ...+.++..|.|+|+||+|+|+++.+++|+|+||+|+|||+|||||+||||||||+++|+|+|+|++|+|.
T Consensus 458 ~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~ 537 (710)
T TIGR03796 458 LEEEEAPAAGSEPSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEIL 537 (710)
T ss_pred cccccccccccccCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEE
Confidence 21100 0 01111344689999999999987667799999999999999999999999999999999999999999999
Q ss_pred EcCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCCC-CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCC
Q 000432 1322 IDNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLV-QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWS 1400 (1513)
Q Consensus 1322 IDGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~-~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLS 1400 (1513)
+||+|+++++.+++|++|+||||||++|+|||||||..++ +++|+++++|++.++++++++++|+||||.++|+|.|||
T Consensus 538 idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LS 617 (710)
T TIGR03796 538 FDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLS 617 (710)
T ss_pred ECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCC
Confidence 9999999999999999999999999999999999998764 689999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecCh
Q 000432 1401 VGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSP 1480 (1513)
Q Consensus 1401 gGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp 1480 (1513)
|||||||+||||++++|+||+||||||+||++||+.|.+.|++ .++|+|+||||++++.+||||+|||+|+|+|.|+|
T Consensus 618 GGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~ 695 (710)
T TIGR03796 618 GGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTH 695 (710)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCH
Confidence 9999999999999999999999999999999999999999987 58999999999999999999999999999999999
Q ss_pred hHHHhcCChHHHHHH
Q 000432 1481 TKLLEREDSFFSQLI 1495 (1513)
Q Consensus 1481 ~eLl~~~~~~f~~l~ 1495 (1513)
+||+++ ++.|++|+
T Consensus 696 ~~Ll~~-~~~y~~l~ 709 (710)
T TIGR03796 696 EELWAV-GGAYARLI 709 (710)
T ss_pred HHHHHc-CCcHHHHh
Confidence 999987 78999987
No 16
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=8e-81 Score=813.31 Aligned_cols=562 Identities=20% Similarity=0.250 Sum_probs=470.6
Q ss_pred chHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 926 GKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLV 1005 (1513)
Q Consensus 926 ~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~ 1005 (1513)
+++.++.|++..++.. ..++++.++..++.++.|++++...|.............+...++++.++..++.+++.++.
T Consensus 143 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (708)
T TIGR01193 143 SLLKFIPLITRQKKLI--VNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLL 220 (708)
T ss_pred hHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556677776544432 23445566677778888888887666432111111222334445556667788889999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000432 1006 AITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFV 1085 (1513)
Q Consensus 1006 ~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~l 1085 (1513)
...+.+...+++.+++++++++|++||+++++|++++|++ |.+.+...+...+...+..++.+++.++++++++|++++
T Consensus 221 ~~~~~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 299 (708)
T TIGR01193 221 NVLGQRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLLFL 299 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 9999999999999999999999999999999999999998 888888888877777777888888888889999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHH
Q 000432 1086 IFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAME 1165 (1513)
Q Consensus 1086 v~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1165 (1513)
+++..++++..+...+.+..++..+......+...+++.|+++|+.+||+|+.|+++.+++.+..+...+..+.......
T Consensus 300 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (708)
T TIGR01193 300 LSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQ 379 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77666666666666666777777777777888999999999999999999999999988888887776666555544444
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 000432 1166 WLCFRLNLLSNFVFAFSLVV-LVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAP 1244 (1513)
Q Consensus 1166 wl~~~l~~~~~~~~~~~~~~-~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~ 1244 (1513)
+......++..+...+++++ ...+..|.+++|.+.++.++...+..++..+...+.+++....+++|+.++++.|+|.+
T Consensus 380 ~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~ 459 (708)
T TIGR01193 380 GQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFI 459 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc
Confidence 44333333333222222222 23345899999999999999999999999999999999999999999999998877653
Q ss_pred CcccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcC
Q 000432 1245 LVTEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDN 1324 (1513)
Q Consensus 1245 ~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDG 1324 (1513)
... .....++..|.|+|+||+|+|+++ +++|+|+||+|+|||+|||||+||||||||+++|+|+|+|++|+|++||
T Consensus 460 ~~~---~~~~~~~~~~~I~~~~vsf~y~~~-~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg 535 (708)
T TIGR01193 460 NKK---KRTELNNLNGDIVINDVSYSYGYG-SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNG 535 (708)
T ss_pred ccc---cccCCCCCCCcEEEEEEEEEcCCC-CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECC
Confidence 211 111234456899999999999754 5699999999999999999999999999999999999999999999999
Q ss_pred eeCCCCChHHhhhceEEEcCCCccccCcHhhccCCC--CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChh
Q 000432 1325 VDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPL--VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVG 1402 (1513)
Q Consensus 1325 vdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~--~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgG 1402 (1513)
+|+++++.+++|++|+||||||+||+|||||||..+ .+++|+++++|++.++++++++++|+||||.|+|+|.+||||
T Consensus 536 ~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgG 615 (708)
T TIGR01193 536 FSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGG 615 (708)
T ss_pred EEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHH
Confidence 999999999999999999999999999999999876 468999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhH
Q 000432 1403 QRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTK 1482 (1513)
Q Consensus 1403 QRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~e 1482 (1513)
|||||+||||++++|+|||||||||+||++||+.|++.|++. +++|+|+||||++++..||+|+||++|+++|.|+|+|
T Consensus 616 QrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~ 694 (708)
T TIGR01193 616 QKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDE 694 (708)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999999999874 7899999999999999999999999999999999999
Q ss_pred HHhcCChHHHHHHH
Q 000432 1483 LLEREDSFFSQLIK 1496 (1513)
Q Consensus 1483 Ll~~~~~~f~~l~~ 1496 (1513)
|+++ +|.|++|++
T Consensus 695 L~~~-~~~y~~l~~ 707 (708)
T TIGR01193 695 LLDR-NGFYASLIH 707 (708)
T ss_pred HHhc-CCcHHHHhh
Confidence 9987 789999975
No 17
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.4e-79 Score=787.34 Aligned_cols=548 Identities=24% Similarity=0.325 Sum_probs=454.8
Q ss_pred HHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 000432 946 ILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGM--NIVLLVYTLLTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHS 1023 (1513)
Q Consensus 946 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ 1023 (1513)
.+++.++..++.+..|+++.+..|........... ..++++++++.++..++.+++.++....+.+...+++.+++++
T Consensus 28 ~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ 107 (592)
T PRK10790 28 AVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVGVVQQLRTDVMDA 107 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666777777888887666543211111011 1123334555556777888889999999999999999999999
Q ss_pred hhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1024 VHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVIFIPVTGICIWYQQYYIP 1103 (1513)
Q Consensus 1024 ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~ 1103 (1513)
++++|+++|++.++|++++|+++|++.++..+...+..++..++.+++.++++++.+|+++++++..+++...+...+.+
T Consensus 108 l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~i~~~~~~~~~~ 187 (592)
T PRK10790 108 ALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRMALVAIMIFPAVLVVMVIYQR 187 (592)
T ss_pred HHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999877654433333333344444
Q ss_pred HHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 000432 1104 TARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEWL-CFRLNLLSNFVFAFS 1182 (1513)
Q Consensus 1104 ~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl-~~~l~~~~~~~~~~~ 1182 (1513)
..+...+......+...+++.|+++|+.+||+|+.|+++.+++.+..++..+..........+. .....++..+...+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (592)
T PRK10790 188 YSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRPLLSLFSALILCGL 267 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455555555667788999999999999999999999999888887776665544443333322 222333332222221
Q ss_pred HHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCceE
Q 000432 1183 LVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLVTEECRPPSNWPDVGTI 1262 (1513)
Q Consensus 1183 ~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g~I 1262 (1513)
.+.......|.++.|.+.+++.|...+..++..+...+.++++...+.+|+.++++.+++++. .. ..++..+.|
T Consensus 268 ~~~~~~~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~---~~---~~~~~~~~i 341 (592)
T PRK10790 268 LMLFGFSASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYG---ND---DRPLQSGRI 341 (592)
T ss_pred HHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCC---CC---ccCCCCCeE
Confidence 111112357889999999999999999999999999999999999999999999987654221 11 112345789
Q ss_pred EEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEE
Q 000432 1263 SFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGII 1342 (1513)
Q Consensus 1263 ~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiV 1342 (1513)
+|+||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+||
T Consensus 342 ~~~~v~f~y~~~-~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~l~~~i~~v 420 (592)
T PRK10790 342 DIDNVSFAYRDD-NLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSSLSHSVLRQGVAMV 420 (592)
T ss_pred EEEEEEEEeCCC-CceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhhCCHHHHHhheEEE
Confidence 999999999754 4699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000432 1343 PQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVL 1422 (1513)
Q Consensus 1343 pQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiL 1422 (1513)
||||+||+||||+||.++++++|+++++|++++|++++++++|+||||.++|+|.|||||||||||||||++++|+||+|
T Consensus 421 ~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRialARaLl~~~~illl 500 (592)
T PRK10790 421 QQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLALARVLVQTPQILIL 500 (592)
T ss_pred ccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHHHHHHHhCCCEEEE
Confidence 99999999999999999888999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHHHHHHHhhc
Q 000432 1423 DEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIKEYSMR 1501 (1513)
Q Consensus 1423 DEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~~~~~~ 1501 (1513)
|||||+||++|++.|++.|++..++||+|+||||++++..||+|++||+|+++|.|+|+||+++ ++.|++|++.+...
T Consensus 501 DEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~-~~~y~~l~~~~~~~ 578 (592)
T PRK10790 501 DEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAA-QGRYWQMYQLQLAG 578 (592)
T ss_pred eCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhC-CCHHHHHHHHHhhh
Confidence 9999999999999999999998889999999999999999999999999999999999999998 69999999876543
No 18
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=3.6e-79 Score=777.78 Aligned_cols=561 Identities=19% Similarity=0.214 Sum_probs=460.6
Q ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCC----chhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 929 VYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPA----LGMNIVLLVYTLLTVGSSLCVLLRAML 1004 (1513)
Q Consensus 929 ~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~vy~~l~~~~~~~~~~~~~~ 1004 (1513)
.+++|+++..+... +.+++.++..++.++.++.++|.+|........ ......+..+.++.++..++.++..++
T Consensus 6 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (574)
T PRK11160 6 PFLKLYKRHWFMLS--LGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLV 83 (574)
T ss_pred HHHHHHhhhhHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566665443322 334455566667777777777776632100010 011112233445566777888888899
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000432 1005 VAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVF 1084 (1513)
Q Consensus 1005 ~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~ 1084 (1513)
....+.+...++|.+++++++++|+++|++.++|++++|+++|++.++..+...+..++..++.+++.++++++++|.++
T Consensus 84 ~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 163 (574)
T PRK11160 84 SHDATFRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLA 163 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHH
Q 000432 1085 VIFIPVTGIC-IWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSA 1163 (1513)
Q Consensus 1085 lv~ip~~~l~-~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~ 1163 (1513)
++++..+++. ..+..++.+..++..+......+.+.+.+.|+++|+++||+|+.|+++.+++.+..++..+........
T Consensus 164 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 243 (574)
T PRK11160 164 LTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANL 243 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8654433332 233345555556666666777888999999999999999999999999999888888877776666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 000432 1164 MEWLCFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGIN-LNVLQASIIWNICNAENKMISVERILQYSNLPSE 1242 (1513)
Q Consensus 1164 ~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~-l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e 1242 (1513)
..+.....+++..+...++.++......|.+++|.+..++.|... ...++..+...+.+++....|.+|+.++++.|+|
T Consensus 244 ~~~~~~~~~~~~~~~~~~i~~~g~~~~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~ 323 (574)
T PRK11160 244 TGLSQALMILANGLTVVLMLWLAAGGVGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPE 323 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 666555555555544433333332223677888887777766533 3456677777888889999999999999987765
Q ss_pred CCCcccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEE
Q 000432 1243 APLVTEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIII 1322 (1513)
Q Consensus 1243 ~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~I 1322 (1513)
.+.. ...+ ..+..+.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+|+|++|+|.+
T Consensus 324 ~~~~--~~~~--~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i 399 (574)
T PRK11160 324 VTFP--TTST--AAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILL 399 (574)
T ss_pred CCCC--cccC--CCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEE
Confidence 3211 1111 11345789999999999765456999999999999999999999999999999999999999999999
Q ss_pred cCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCC-CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCCh
Q 000432 1323 DNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPL-VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSV 1401 (1513)
Q Consensus 1323 DGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~-~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSg 1401 (1513)
||+|+++++.+++|++|++|||||+||+|||||||... .+.+|+++++|++++++++++++ |+||||.|||+|.+|||
T Consensus 400 ~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSg 478 (574)
T PRK11160 400 NGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSG 478 (574)
T ss_pred CCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCH
Confidence 99999999999999999999999999999999999865 36899999999999999999999 99999999999999999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChh
Q 000432 1402 GQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPT 1481 (1513)
Q Consensus 1402 GQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~ 1481 (1513)
|||||+|||||++++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||+|++|++|+++|.|+|+
T Consensus 479 GqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~ 558 (574)
T PRK11160 479 GEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQ 558 (574)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHH
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHH
Q 000432 1482 KLLEREDSFFSQLIKE 1497 (1513)
Q Consensus 1482 eLl~~~~~~f~~l~~~ 1497 (1513)
||+++ +|.|++|++.
T Consensus 559 ~l~~~-~g~y~~l~~~ 573 (574)
T PRK11160 559 ELLAQ-QGRYYQLKQR 573 (574)
T ss_pred HHHhc-CcHHHHHHhh
Confidence 99987 7999999863
No 19
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=3.3e-79 Score=796.49 Aligned_cols=554 Identities=22% Similarity=0.278 Sum_probs=466.1
Q ss_pred chHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 926 GKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLV 1005 (1513)
Q Consensus 926 ~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~ 1005 (1513)
.++.++.+++..++.. ..++++.++..++.++.|+.++...|.............+...++++.++..++.+++.++.
T Consensus 134 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (694)
T TIGR03375 134 PKHWFWSTLKESWPLY--RDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFL 211 (694)
T ss_pred cchHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666776544332 23445556667778888888877666432111111122333445555666788899999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000432 1006 AITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFV 1085 (1513)
Q Consensus 1006 ~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~l 1085 (1513)
...+.+...+++.++++|++++|++| ++.++|++++|+ +|++.+...+...+...+..++.+++.++++++++|++++
T Consensus 212 ~~~~~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 289 (694)
T TIGR03375 212 DVAGKKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVW 289 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 99999999999999999999999998 789999999999 7999999999988888888888888888899999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHH
Q 000432 1086 IFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAME 1165 (1513)
Q Consensus 1086 v~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1165 (1513)
+.+..+++++.+..++.+..++..+......+...+++.|+++|+++||+|+.|+.+.+++.+..++..+..........
T Consensus 290 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (694)
T TIGR03375 290 VPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSN 369 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666666665666666666677777777888999999999999999999999999999988888887776666655555
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 000432 1166 WLCFRLNLLSNFVFAFSLVV-LVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAP 1244 (1513)
Q Consensus 1166 wl~~~l~~~~~~~~~~~~~~-~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~ 1244 (1513)
+.....+++..+...+..++ +..+..|.+++|.+..+++|...+..++..+...+.+++....+++|+.++++.|+|.+
T Consensus 370 ~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~ 449 (694)
T TIGR03375 370 LATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERP 449 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 55544554444333322222 23345789999999999999999999999999999999999999999999999877643
Q ss_pred CcccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcC
Q 000432 1245 LVTEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDN 1324 (1513)
Q Consensus 1245 ~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDG 1324 (1513)
.. .......+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||
T Consensus 450 ~~---~~~~~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg 526 (694)
T TIGR03375 450 EG---TRFLHRPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDG 526 (694)
T ss_pred CC---CCCCCCCCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 21 111111234578999999999986666799999999999999999999999999999999999999999999999
Q ss_pred eeCCCCChHHhhhceEEEcCCCccccCcHhhccCCCC-CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhH
Q 000432 1325 VDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLV-QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQ 1403 (1513)
Q Consensus 1325 vdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~-~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQ 1403 (1513)
+|+++++++++|+++++|||||++|+|||||||.+.+ +++|+|+++|++.++++++++++|+||||.+||+|.||||||
T Consensus 527 ~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQ 606 (694)
T TIGR03375 527 VDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQ 606 (694)
T ss_pred EEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHH
Confidence 9999999999999999999999999999999998775 589999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHH
Q 000432 1404 RQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKL 1483 (1513)
Q Consensus 1404 RQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eL 1483 (1513)
||||+||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++.+||+|+||++|+|+|.|+|+||
T Consensus 607 rQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eL 686 (694)
T TIGR03375 607 RQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQV 686 (694)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHH
Confidence 99999999999999999999999999999999999999999899999999999999999999999999999999999999
Q ss_pred Hhc
Q 000432 1484 LER 1486 (1513)
Q Consensus 1484 l~~ 1486 (1513)
+++
T Consensus 687 l~~ 689 (694)
T TIGR03375 687 LEA 689 (694)
T ss_pred HHH
Confidence 875
No 20
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=5.7e-79 Score=781.04 Aligned_cols=561 Identities=23% Similarity=0.297 Sum_probs=472.1
Q ss_pred HHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 930 YWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLVAITG 1009 (1513)
Q Consensus 930 ~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~ 1009 (1513)
++.|++...+... ..+++.++..+...+.+++++...|.............+...++++.++..++.+++.++....+
T Consensus 16 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 93 (582)
T PRK11176 16 LWPTIAPFKAGLI--VAGVALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISWVS 93 (582)
T ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455554433322 22334444455556666666654443211111111122233344566677788888888899999
Q ss_pred HHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 000432 1010 LRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVIFIP 1089 (1513)
Q Consensus 1010 ~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~ip 1089 (1513)
.+....++.++++++++.|.++|++...|++++|+++|++.+...+...+..++..++.+++.++++++.+|+++++++.
T Consensus 94 ~~~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~ 173 (582)
T PRK11176 94 GKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIV 173 (582)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998887666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHHHHH
Q 000432 1090 VTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEWLCF 1169 (1513)
Q Consensus 1090 ~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~ 1169 (1513)
.+++..++...+.+..++..+......+...+++.|.++|+.+||+|+.|+++.+++.+..+...+..........+...
T Consensus 174 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (582)
T PRK11176 174 IAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDP 253 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66665555556666666666666777888999999999999999999999999999998888888877777666666666
Q ss_pred HHHHHHHHHHHHHHHH-HHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccc
Q 000432 1170 RLNLLSNFVFAFSLVV-LVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLVTE 1248 (1513)
Q Consensus 1170 ~l~~~~~~~~~~~~~~-~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~~ 1248 (1513)
..+++..+...+++++ ...+..|.+++|.+.+++++...+..++..+...+..++....+.+|+.++++.+++.+..
T Consensus 254 ~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~-- 331 (582)
T PRK11176 254 IIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEG-- 331 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCC--
Confidence 6666655544333333 2334578999999999999999999999999999999999999999999999877653311
Q ss_pred CCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCC
Q 000432 1249 ECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDIT 1328 (1513)
Q Consensus 1249 ~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~ 1328 (1513)
.. ...|..+.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|++
T Consensus 332 ~~---~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~ 408 (582)
T PRK11176 332 KR---VIERAKGDIEFRNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLR 408 (582)
T ss_pred Cc---CCCCCCCeEEEEEEEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhh
Confidence 11 112345689999999999876667999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHhhhceEEEcCCCccccCcHhhccCCC--CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHH
Q 000432 1329 KIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPL--VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQL 1406 (1513)
Q Consensus 1329 ~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~--~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQr 1406 (1513)
+++.+++|++|+||||||++|+|||||||... ++++|+|++++++.++++++++++|+||||.+||+|.+||||||||
T Consensus 409 ~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQR 488 (582)
T PRK11176 409 DYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQR 488 (582)
T ss_pred hcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHH
Confidence 99999999999999999999999999999864 3489999999999999999999999999999999999999999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhc
Q 000432 1407 FCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1407 l~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
|+||||++++|+|||||||||+||++|++.|.+.|++..++||+|+||||++++.+||+|++||+|+|+|.|+|++|+++
T Consensus 489 i~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~ 568 (582)
T PRK11176 489 IAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQ 568 (582)
T ss_pred HHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 99999999999999999999999999999999999998889999999999999999999999999999999999999998
Q ss_pred CChHHHHHHHHH
Q 000432 1487 EDSFFSQLIKEY 1498 (1513)
Q Consensus 1487 ~~~~f~~l~~~~ 1498 (1513)
++.|++|++++
T Consensus 569 -~~~y~~l~~~~ 579 (582)
T PRK11176 569 -NGVYAQLHKMQ 579 (582)
T ss_pred -CChHHHHHHHH
Confidence 68999998865
No 21
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.3e-78 Score=729.52 Aligned_cols=547 Identities=21% Similarity=0.282 Sum_probs=451.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 307 AIFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQLGLR 386 (1513)
Q Consensus 307 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 386 (1513)
.+.+..|+.+..+.++.++........|.++++++|.+....... ....-....+.+..++.+++.....+..+..+.+
T Consensus 140 ~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~-~~~~~~~~~l~~l~~~~a~~~~~r~~~~~~a~~r 218 (716)
T KOG0058|consen 140 GLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSA-DALKRACTILLGLFLIGALANAIRGGLLQYAGER 218 (716)
T ss_pred HHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556888888999999999999999999999999887621111 1111223344445556666766666777788899
Q ss_pred HHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 000432 387 LRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIF-YSNYMFMLPVQISLAIYIL-RTNLGLGSLAALAA 464 (1513)
Q Consensus 387 ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~~~l~~L-~~~lg~~~l~~l~~ 464 (1513)
+-..++..+|++.++....+++++.+||++++++.|++.+.+.+. ++....-..++.+.++.++ +..+-++. +.++.
T Consensus 219 v~~rlR~~lF~sil~QdiaFFD~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~~Ltl-v~~i~ 297 (716)
T KOG0058|consen 219 VVARLRTDLFRSLLRQDIAFFDENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSWRLTL-VTLIV 297 (716)
T ss_pred HHHHHHHHHHHHHHhhhhhhhccCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhHHHHH-HHHHH
Confidence 999999999999999999999999999999999999999999875 4555555556666655443 33344433 33444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000432 465 TLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSAF- 543 (1513)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~~- 543 (1513)
+.+++.+..+++++.++..++.+++..+-.+...|.|++||+||.|+.|+...++.++.-+.-++..+|..........
T Consensus 298 ~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a~a~~~f~~~ 377 (716)
T KOG0058|consen 298 VPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEAVAYGIFFGS 377 (716)
T ss_pred hcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHhHhH
Confidence 4455556677788888888888888888899999999999999999999987777665433333332332222222111
Q ss_pred -HHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc
Q 000432 544 -IFWGSPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAVEY 622 (1513)
Q Consensus 544 -~~~~~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~ 622 (1513)
-+......++++.+|++++..+.+|+|.+.+++.|-..+..++..+...++.++++..|.+|+.++++.++.-+..-..
T Consensus 378 ~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~P~i~~~G~~ 457 (716)
T KOG0058|consen 378 TNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRKPRIPLTGTL 457 (716)
T ss_pred HHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccCCCCCCCCcc
Confidence 1222335678889999999999999999999999999999999999999999999999999999999865433322222
Q ss_pred cCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe------
Q 000432 623 VPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------ 696 (1513)
Q Consensus 623 ~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------ 696 (1513)
.|. ...+.|+|+||+|+||..++.|+|+|+||+|+|||.||+||||||||||+.++|+++|+|++|+|.+||.
T Consensus 458 ~p~-~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~IllDG~~i~~~~ 536 (716)
T KOG0058|consen 458 APD-HLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRILLDGVPISDIN 536 (716)
T ss_pred ccc-cccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEEECCeehhhcC
Confidence 332 4567899999999999988899999999999999999999999999999999999999999999999994
Q ss_pred -------EEEEcCCCcccCccHHHHHccCCCC-CchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHH
Q 000432 697 -------KAYVPQSPWILTGNIRENILFGNQY-DSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIA 768 (1513)
Q Consensus 697 -------~ayv~Q~~~l~~~ti~eNI~fg~~~-~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lA 768 (1513)
+|+|.|||-||++||+|||+||.+. ++|+.+++.+.+..++.+..+|+|++|.|||+|..||||||||||||
T Consensus 537 ~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLSGGQKQRIAIA 616 (716)
T KOG0058|consen 537 HKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLSGGQKQRIAIA 616 (716)
T ss_pred HHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCccccccchHHHHHHHH
Confidence 6999999999999999999999873 56778888899999999999999999999999999999999999999
Q ss_pred HHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcC-c
Q 000432 769 RAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQN-I 847 (1513)
Q Consensus 769 Ral~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~-~ 847 (1513)
|||++||.||||||+|||||++. +++.++++...++++|||+|+||++++++||+|+|+++|+++|.|+|+||++.. +
T Consensus 617 RALlr~P~VLILDEATSALDaeS-E~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h~eLl~~~~g 695 (716)
T KOG0058|consen 617 RALLRNPRVLILDEATSALDAES-EYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTHDELLSKPNG 695 (716)
T ss_pred HHHhcCCCEEEEechhhhcchhh-HHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccHHHHhhCccc
Confidence 99999999999999999999998 566689999999999999999999999999999999999999999999999987 7
Q ss_pred cHHHHHHhhh
Q 000432 848 GFEVLVGAHS 857 (1513)
Q Consensus 848 ~~~~l~~~~~ 857 (1513)
.|.++++.+.
T Consensus 696 ly~~Lv~~q~ 705 (716)
T KOG0058|consen 696 LYAKLVQRQL 705 (716)
T ss_pred HHHHHHHHhc
Confidence 8999987653
No 22
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-80 Score=703.78 Aligned_cols=538 Identities=23% Similarity=0.326 Sum_probs=435.3
Q ss_pred HHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 000432 951 SSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTV------GSSLCVLLRAMLVAITGLRTAQKLFTNMLHSV 1024 (1513)
Q Consensus 951 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~------~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~l 1024 (1513)
++..++....|...+|..+... .+..........|+.+.+ +++++.-+|+++......-+.+.+--++|+|+
T Consensus 225 ~i~rli~~~~pi~~k~iv~~lt--ap~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lfrHl 302 (790)
T KOG0056|consen 225 IIGRLINVSLPILSKWIVDELT--APDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELFRHL 302 (790)
T ss_pred HHHHHHhhhhHHhHHHHHHhhc--CcchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHHHHH
Confidence 3444555666666677666543 133333334444444433 34677888999988899999999999999999
Q ss_pred hcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHH-HHHHhHHHHHHHHHHHHHHHHHH----H
Q 000432 1025 HRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGV-MSQVAWQVFVIFIPVTGICIWYQ----Q 1099 (1513)
Q Consensus 1025 l~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v-~~~~~~~l~lv~ip~~~l~~~~~----~ 1099 (1513)
..+.++|+-...+|+++.-+.+..+.+. .+...+.++...++-+..+++. ....+||+.+++..++.+|.++. .
T Consensus 303 h~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTe 381 (790)
T KOG0056|consen 303 HNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITE 381 (790)
T ss_pred HhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHhheeeeeeh
Confidence 9999999999999998888877776665 4444444444444444443333 34578888887777666665432 2
Q ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1100 YYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEWLCFRLNLLSNFVF 1179 (1513)
Q Consensus 1100 ~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~ 1179 (1513)
+-.+..|+....+.+++ ..-.+++-+.+|+|-|++|+.-.+++.+.++++++.-+........+...-+.+..+..
T Consensus 382 WRTk~rR~Mn~~~nesr----Ar~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgl 457 (790)
T KOG0056|consen 382 WRTKARRKMNNSWNESR----ARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIGLGL 457 (790)
T ss_pred hhHHHHHHhhhhhhhhh----hhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHH
Confidence 22222233322333333 34568899999999999999999999999999999877766555544443333333322
Q ss_pred HHHHHH-HHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCCC
Q 000432 1180 AFSLVV-LVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLVTEECRPPSNWPD 1258 (1513)
Q Consensus 1180 ~~~~~~-~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~ 1258 (1513)
..+.++ ++.+..+..+.|...++.+|.+++.++++|+...+..+|++.+-+||++++++.++|- .+.+..++---.
T Consensus 458 l~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eV---vd~P~a~pl~~~ 534 (790)
T KOG0056|consen 458 LAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEV---VDLPGAPPLKVT 534 (790)
T ss_pred hhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchh---hcCCCCCCcccc
Confidence 222222 2234477889999999999999999999999999999999999999999999865543 222222222235
Q ss_pred CceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhc
Q 000432 1259 VGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSR 1338 (1513)
Q Consensus 1259 ~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~ 1338 (1513)
+|.|+|+||+|.|+|+.| ||+||||+++||+.||+|||||+||||++++|+|++|.++|+|.|||+||+.+..++||++
T Consensus 535 ~G~i~fsnvtF~Y~p~k~-vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~ 613 (790)
T KOG0056|consen 535 QGKIEFSNVTFAYDPGKP-VLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSS 613 (790)
T ss_pred CCeEEEEEeEEecCCCCc-eeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHh
Confidence 799999999999999865 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEcCCCccccCcHhhccCCCC-CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCC
Q 000432 1339 LGIIPQDPTLFDGTVRGNLDPLV-QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKS 1417 (1513)
Q Consensus 1339 isiVpQdp~LF~gTIR~NLdp~~-~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~ 1417 (1513)
||+||||.+||++||.+||.+.. .++|||+.+|++.+++||-|.++|+||+|.|||+|-.||||||||+++||++||+|
T Consensus 614 IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P 693 (790)
T KOG0056|consen 614 IGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAP 693 (790)
T ss_pred cCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCC
Confidence 99999999999999999998753 79999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHHHHHH
Q 000432 1418 SILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIKE 1497 (1513)
Q Consensus 1418 ~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~~ 1497 (1513)
.|++||||||+||..||+.||.++.+..+++|.|+|||||+||.+||.|+|+++|+|+|.|+|+||+++++|.|++|++.
T Consensus 694 ~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~ 773 (790)
T KOG0056|consen 694 SIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYADMWQA 773 (790)
T ss_pred cEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999965
Q ss_pred Hh
Q 000432 1498 YS 1499 (1513)
Q Consensus 1498 ~~ 1499 (1513)
+.
T Consensus 774 qq 775 (790)
T KOG0056|consen 774 QQ 775 (790)
T ss_pred HH
Confidence 44
No 23
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1e-79 Score=780.30 Aligned_cols=518 Identities=22% Similarity=0.300 Sum_probs=442.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHH
Q 000432 979 GMNIVLLVYTLLTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGR 1058 (1513)
Q Consensus 979 ~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~ 1058 (1513)
....+.+.|+.++++..+..++...++.+.+.|...++|.+.+++++|.+++|||++..|++.+|+++|++.+++.+...
T Consensus 69 ~~~~~~l~~~~lg~~~~~~~~~q~~c~~~~geRq~~riR~~yl~~iLrQdi~~fD~~~~g~~~~~l~~d~~~I~d~~geK 148 (1228)
T KOG0055|consen 69 EVSKVALYFVYLGVGVFISGFIQVSCWMRTGERQTARIRSKYLKAILRQDIGWFDTNSTGELVTRLSDDIELIQDAIGEK 148 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccceeecccccceEEEecCcHHHHHHHHHHH
Confidence 34567778888888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhch
Q 000432 1059 LGWCAFSIIQILGTIGVMSQVAWQVFVIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQ 1138 (1513)
Q Consensus 1059 l~~~~~~~~~~~~~l~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~ 1138 (1513)
+..++..+.++++.+++.++..|++++++++..++.......+.+..-.....+..+.+...+...|++.+++|+.||+.
T Consensus 149 vg~~i~~~~~fi~g~ii~F~~~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~g 228 (1228)
T KOG0055|consen 149 VGNFIQLLATFIAGFVIGFYYGWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNG 228 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcC
Confidence 99999999999999999999999999988887777766666666666666666777777888899999999999999999
Q ss_pred HHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCCccCHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1139 EDRFTNANLSLIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLVVL-VTLPEGIINPSIAGLAVTYGINLNVLQASII 1217 (1513)
Q Consensus 1139 e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~-~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~ 1217 (1513)
|++..+++.+.++...+.............-...++.....+...++. ..+..+..++|.+...+.+.+.-...+....
T Consensus 229 q~~e~~ry~~~L~~~~k~gi~~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~ 308 (1228)
T KOG0055|consen 229 EKKEIERYSKALENALKFGIKKGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQAS 308 (1228)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccc
Confidence 999999999888887776554433322222222222222233333333 2233556677766555544444444555556
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCceEEEEEEEEEEcCCC-CcceeeeeEEeeCCcEEEEEc
Q 000432 1218 WNICNAENKMISVERILQYSNLPSEAPLVTEECRPPSNWPDVGTISFHNLQIRYAEHL-PSVLKNISCTFPGRKKVGVVG 1296 (1513)
Q Consensus 1218 ~~~~~le~~~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~-~~vLk~is~~I~~GekvgIVG 1296 (1513)
-.+..+.+..+|..+|.+..+..+.......+... .-..+|.|||+||+|+|+.+. .++|+|+||+|++||.||+||
T Consensus 309 p~l~~f~~a~~aa~~I~~~i~~~~~i~~~~~~~~~--~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG 386 (1228)
T KOG0055|consen 309 PHLSAFAKARAAAYRIFETIDRKPSIDPYSKGGRV--LSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVG 386 (1228)
T ss_pred cchHHHhccccchHHHHHHhcCCCCCCcccccCCc--ccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEEC
Confidence 66777888899999999988755432211111111 123579999999999997543 369999999999999999999
Q ss_pred CCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCCC-CCCHHHHHHHHHHc
Q 000432 1297 RTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLV-QYSDKQVWEALDKC 1375 (1513)
Q Consensus 1297 rTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~-~~sdeei~~aL~~~ 1375 (1513)
+|||||||++++|.|+|+|++|+|+|||.||++++.++||++||+|.|||+||++||+|||.++. ++|++|+.+|++.+
T Consensus 387 ~SGsGKST~i~LL~RfydP~~G~V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~a 466 (1228)
T KOG0055|consen 387 PSGSGKSTLIQLLARFYDPTSGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAA 466 (1228)
T ss_pred CCCCCHHHHHHHHHHhcCCCCceEEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999875 79999999999999
Q ss_pred CCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEecc
Q 000432 1376 QLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAH 1455 (1513)
Q Consensus 1376 ~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAH 1455 (1513)
+.++||.++|+||||.|||+|..|||||||||||||||+|+|+||+||||||+||+++|+.+|++|++..+|+|.|+|||
T Consensus 467 na~~fi~~lp~g~~T~vge~g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaH 546 (1228)
T KOG0055|consen 467 NAHDFILKLPDGYDTLVGERGVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAH 546 (1228)
T ss_pred cHHHHHHhhHHhhcccccCCCCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhhHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHHHHHHHh
Q 000432 1456 RIHTVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIKEYS 1499 (1513)
Q Consensus 1456 Rl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~~~~ 1499 (1513)
||+||+++|+|+||++|+|||.|+|+||++++ |.|++|++.+.
T Consensus 547 RLStIrnaD~I~v~~~G~IvE~G~h~ELi~~~-G~Y~~lv~~Q~ 589 (1228)
T KOG0055|consen 547 RLSTIRNADKIAVMEEGKIVEQGTHDELIALG-GIYSSLVRLQE 589 (1228)
T ss_pred ehhhhhccCEEEEEECCEEEEecCHHHHHhcc-chHHHHHHHHh
Confidence 99999999999999999999999999999995 99999998664
No 24
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.6e-77 Score=780.08 Aligned_cols=565 Identities=22% Similarity=0.269 Sum_probs=476.9
Q ss_pred chHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 926 GKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLV 1005 (1513)
Q Consensus 926 ~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~ 1005 (1513)
+++.++.+++...+.+ ...+++.++..++.++.|+.++...|.............+...++++.++..++.+++.++.
T Consensus 126 ~~~~~~~~~~~~~~~~--~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~ 203 (694)
T TIGR01846 126 GFSWFIPAIIRYRKQF--REVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLF 203 (694)
T ss_pred cHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556666666444332 23444556667777888888887666532111111223344555666677888899999999
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000432 1006 AITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFV 1085 (1513)
Q Consensus 1006 ~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~l 1085 (1513)
...+.+...+++.+++++++++|++||++.++|++++|+ +|++.+...+...+..++..++.+++.++++++++|++++
T Consensus 204 ~~~~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 282 (694)
T TIGR01846 204 AHLTSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTG 282 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 6999999999888888887777777778899999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHH
Q 000432 1086 IFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAME 1165 (1513)
Q Consensus 1086 v~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1165 (1513)
+++..++++..+..+..+..++..+......+...+++.|+++|+.+||+|+.|+++.+++.+..+...+..........
T Consensus 283 i~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (694)
T TIGR01846 283 VVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGN 362 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76665555555555555555555555556677888999999999999999999999999999888888877777766666
Q ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 000432 1166 WLCFRLNLLSNFVFAFSLVVL-VTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAP 1244 (1513)
Q Consensus 1166 wl~~~l~~~~~~~~~~~~~~~-~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~ 1244 (1513)
+.....+++..+...+..++. ..+..|.+++|.+.++.++...+..++..+...+.+++....+.+|+.++++.|+|.+
T Consensus 363 ~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~ 442 (694)
T TIGR01846 363 IAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPR 442 (694)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcc
Confidence 666666666554444333332 3345789999999999999999999999999999999999999999999998876643
Q ss_pred CcccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcC
Q 000432 1245 LVTEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDN 1324 (1513)
Q Consensus 1245 ~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDG 1324 (1513)
.. ...+. .+..|.|+|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|.|+|+|++|+|++||
T Consensus 443 ~~--~~~~~--~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg 518 (694)
T TIGR01846 443 SA--GLAAL--PELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDG 518 (694)
T ss_pred CC--CCCCC--CCCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 21 11111 123578999999999987666799999999999999999999999999999999999999999999999
Q ss_pred eeCCCCChHHhhhceEEEcCCCccccCcHhhccCCC-CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhH
Q 000432 1325 VDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPL-VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQ 1403 (1513)
Q Consensus 1325 vdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~-~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQ 1403 (1513)
+|+++++.+++|+++++|||||++|+|||||||... .+++|+++++|++.++++++++++|+||||.++|+|.+|||||
T Consensus 519 ~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq 598 (694)
T TIGR01846 519 VDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQ 598 (694)
T ss_pred EehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHH
Confidence 999999999999999999999999999999999875 3689999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHH
Q 000432 1404 RQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKL 1483 (1513)
Q Consensus 1404 RQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eL 1483 (1513)
|||++||||++++|+|||||||||+||++|++.+.+.|++..+++|+|+||||++++..||+|+||++|+|+|.|+|++|
T Consensus 599 ~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l 678 (694)
T TIGR01846 599 RQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEEL 678 (694)
T ss_pred HHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred HhcCChHHHHHHHHH
Q 000432 1484 LEREDSFFSQLIKEY 1498 (1513)
Q Consensus 1484 l~~~~~~f~~l~~~~ 1498 (1513)
+++ +|.|++|++++
T Consensus 679 ~~~-~~~y~~l~~~~ 692 (694)
T TIGR01846 679 LAL-QGLYARLWQQQ 692 (694)
T ss_pred HHc-CChHHHHHHhh
Confidence 997 69999998754
No 25
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=4.2e-77 Score=762.85 Aligned_cols=547 Identities=24% Similarity=0.314 Sum_probs=477.3
Q ss_pred HHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 000432 946 ILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVH 1025 (1513)
Q Consensus 946 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll 1025 (1513)
.+++.++..++....+++++...+.............+.+.++++.++..++.+++.++....+.+....++..++++++
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~~~ 98 (571)
T TIGR02203 19 AGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSNKVVRDIRVRMFEKLL 98 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445556666666677776444332111111122334445667777888889999999999999999999999999999
Q ss_pred cCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1026 RAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVIFIPVTGICIWYQQYYIPTA 1105 (1513)
Q Consensus 1026 ~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~~~ 1105 (1513)
+.|.++|++.+.|++++|+++|++.++..+...+..++..++.+++.++++++++|+++++++...++..++...+.+..
T Consensus 99 ~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~~~l~~~~~~~~~~~~ 178 (571)
T TIGR02203 99 GLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVMLPVLSILMRRVSKRL 178 (571)
T ss_pred cCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988887777777777888888
Q ss_pred HHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1106 RELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLVV 1185 (1513)
Q Consensus 1106 r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~ 1185 (1513)
++..+......++..+.+.|+++|+.+||+++.++++.+++.+..+...+..........+.....+++..+...+.+++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (571)
T TIGR02203 179 RRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPITQLIASLALAVVLFI 258 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888999999999999999999999999999999999988888777777767676666666655444333333
Q ss_pred H-HHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCceEEE
Q 000432 1186 L-VTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLVTEECRPPSNWPDVGTISF 1264 (1513)
Q Consensus 1186 ~-~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~f 1264 (1513)
. ..+..|.+++|.+..+++|...+..++..+...+..++....+.+|+.++++.+++.+.. ..+.. +..+.|++
T Consensus 259 g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~---~~~~~--~~~~~i~~ 333 (571)
T TIGR02203 259 ALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTG---TRAIE--RARGDVEF 333 (571)
T ss_pred HHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC---CCCCC--CCCCeEEE
Confidence 2 334578999999999999999999999999999999999999999999999876654321 11111 23578999
Q ss_pred EEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcC
Q 000432 1265 HNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQ 1344 (1513)
Q Consensus 1265 ~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQ 1344 (1513)
+||+|+|+++.+++|+|+||+|++||+|+|||+||||||||+++|.|+++|++|+|.+||+|+++++.+++|++++||||
T Consensus 334 ~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~~~~~~~~i~~v~Q 413 (571)
T TIGR02203 334 RNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYTLASLRRQVALVSQ 413 (571)
T ss_pred EEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcCHHHHHhhceEEcc
Confidence 99999998755679999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCcHhhccCCCC--CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000432 1345 DPTLFDGTVRGNLDPLV--QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVL 1422 (1513)
Q Consensus 1345 dp~LF~gTIR~NLdp~~--~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiL 1422 (1513)
||++|+|||||||..++ +++|++++++++++++++++.++|+||||.++|+|.+||||||||||||||++++|+||+|
T Consensus 414 ~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaLARall~~~~illL 493 (571)
T TIGR02203 414 DVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAIARALLKDAPILIL 493 (571)
T ss_pred CcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999998763 6999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHHHHHHH
Q 000432 1423 DEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIKEY 1498 (1513)
Q Consensus 1423 DEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~~~ 1498 (1513)
|||||+||.+|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|+++ ++.|+++++++
T Consensus 494 DEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~-~~~~~~~~~~~ 568 (571)
T TIGR02203 494 DEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLAR-NGLYAQLHNMQ 568 (571)
T ss_pred eCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHc-CCHHHHHHHHh
Confidence 9999999999999999999999899999999999999999999999999999999999999987 68999988754
No 26
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.6e-77 Score=710.97 Aligned_cols=514 Identities=22% Similarity=0.301 Sum_probs=450.7
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHH
Q 000432 979 GMNIVLLVYTLLTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGR 1058 (1513)
Q Consensus 979 ~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~ 1058 (1513)
+...+++.+++..++..+..+.+......++.++...+|.++++++.+.+..+-+..|+|++.+.++.-++.++..+...
T Consensus 38 ~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ry 117 (559)
T COG4988 38 SLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARY 117 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 34566677777788889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHH
Q 000432 1059 LGWCAFSIIQILGTIGVMSQVAWQVFVI---FIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHA 1135 (1513)
Q Consensus 1059 l~~~~~~~~~~~~~l~v~~~~~~~l~lv---~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRa 1135 (1513)
++.++.+.+..+..++.+++.+|..+++ ..|++++++++ ....++...+..-.+...+.+||-+.++|+.|+|+
T Consensus 118 LPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMil---vg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~ 194 (559)
T COG4988 118 LPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMIL---VGLAAKDASEKQFSALARLSGHFLDRLRGLETLRA 194 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH---HHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHH
Confidence 9999999999999999999999987665 45655555443 33344444455556677889999999999999999
Q ss_pred hchHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcC-CccCHHHHHHHHHHHHHHHHHH
Q 000432 1136 FDQEDRFTNANLSLIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLVVLV-TLPE-GIINPSIAGLAVTYGINLNVLQ 1213 (1513)
Q Consensus 1136 f~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~-~~~~-g~i~~g~~g~~l~y~~~l~~~l 1213 (1513)
|+..+...++..+.-.++.+.........---+..+|++.++.++.+++... .+.. |.++....-+++..+--+..++
T Consensus 195 f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~Pl 274 (559)
T COG4988 195 FGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPL 274 (559)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHH
Confidence 9999988888887777777766666555555567788888877777766643 2334 6777777777778888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEE
Q 000432 1214 ASIIWNICNAENKMISVERILQYSNLPSEAPLVTEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVG 1293 (1513)
Q Consensus 1214 ~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~Gekvg 1293 (1513)
..+...+....+...+.|.+..+++.|.+.+... ......|....+|+.+|++|+|+++. ++++|+||+++||+++|
T Consensus 275 R~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~--~~~~~~~~~~~ei~~~~l~~~y~~g~-~~l~~l~~t~~~g~~ta 351 (559)
T COG4988 275 RDLGSFFHAAAAGEAAADKLFTLLESPVATPGSG--EKAEVANEPPIEISLENLSFRYPDGK-PALSDLNLTIKAGQLTA 351 (559)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCc--cccccccCCCceeeecceEEecCCCC-cccCCceeEecCCcEEE
Confidence 9999999999999999999999998776644321 11123333345677779999998775 79999999999999999
Q ss_pred EEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCCC-CCCHHHHHHHH
Q 000432 1294 VVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLV-QYSDKQVWEAL 1372 (1513)
Q Consensus 1294 IVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~-~~sdeei~~aL 1372 (1513)
|||+||||||||+++|+|+++|++|+|.+||+|..+++.+++|+++++|||+|++|+|||||||..++ +.|||||++|+
T Consensus 352 lvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al 431 (559)
T COG4988 352 LVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFAGTIRENILLARPDASDEEIIAAL 431 (559)
T ss_pred EECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998765 58999999999
Q ss_pred HHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEE
Q 000432 1373 DKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVT 1452 (1513)
Q Consensus 1373 ~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~ 1452 (1513)
+++++.|+++. |+||||.+||+|.+|||||+||++||||++++++++++|||||+||.|||+.|++.|.+.++++|||+
T Consensus 432 ~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~ 510 (559)
T COG4988 432 DQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLV 510 (559)
T ss_pred HHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEE
Confidence 99999999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccChhhHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHHHHHHHhh
Q 000432 1453 IAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIKEYSM 1500 (1513)
Q Consensus 1453 IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~~~~~ 1500 (1513)
||||++.+.++|+|+|||+|+++|.|+|++|.++ +|.|++|++++..
T Consensus 511 itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~-~~~y~~l~~~q~~ 557 (559)
T COG4988 511 ITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK-QGLYANLLKQQEG 557 (559)
T ss_pred EEcChHHHhcCCEEEEecCCceeccCCHHHHhhc-CcHHHHHHHHHhc
Confidence 9999999999999999999999999999999998 7999999998654
No 27
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=2.6e-76 Score=747.76 Aligned_cols=521 Identities=20% Similarity=0.255 Sum_probs=425.8
Q ss_pred HHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHH--HHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 930 YWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIV--LLVYTLLTVGSSLCVLLRAMLVAI 1007 (1513)
Q Consensus 930 ~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~vy~~l~~~~~~~~~~~~~~~~~ 1007 (1513)
+++|++...+. +.+.+++.++..++.++.++.+++.+|..... .. ....+ +..++++.++..++.+++.++...
T Consensus 4 l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (529)
T TIGR02868 4 ILPLLQPRTRR--LVVAILLGALALGSAVALLGVSAWLISRAAEM-PP-VLYLSVAAVAVRAFGIGRAVFRYLERLVGHD 79 (529)
T ss_pred HHHHHHhhHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555544332 22344455566677777787777776643211 11 11111 111223445567778888888889
Q ss_pred HHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 000432 1008 TGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVIF 1087 (1513)
Q Consensus 1008 ~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~ 1087 (1513)
.+.+...+++.+++++++++|.+||++.++|++++|+++|++.++..+...+..++..++.+++.++++++.+|.+++++
T Consensus 80 ~~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~ 159 (529)
T TIGR02868 80 AALRSLGRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVL 159 (529)
T ss_pred HHHHHHHHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998876
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHH
Q 000432 1088 IPVTGICIWY-QQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEW 1166 (1513)
Q Consensus 1088 ip~~~l~~~~-~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~w 1166 (1513)
+..++++.++ ..++.+..++..+......+.+.+++.|+++|+++||+|+.|+++.+++.+..+...+..........+
T Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (529)
T TIGR02868 160 AAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGL 239 (529)
T ss_pred HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6554444333 344444455555656677788999999999999999999999999999888888777766665555554
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 000432 1167 LCFRLNLLSNFVFAFSLVVL-VTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPL 1245 (1513)
Q Consensus 1167 l~~~l~~~~~~~~~~~~~~~-~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~ 1245 (1513)
......++..+...++.++. ..+..|.+++|.+..++.|...+..++..+...+.++++...+.+|+.++++.++|.+.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~ 319 (529)
T TIGR02868 240 GAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPE 319 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCC
Confidence 44444444443333333222 23457889999999999999999999999999999999999999999999987765332
Q ss_pred cccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCe
Q 000432 1246 VTEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNV 1325 (1513)
Q Consensus 1246 ~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGv 1325 (1513)
.. ...+...+|..+.|+|+||+|+|+++. ++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+
T Consensus 320 ~~-~~~~~~~~~~~~~I~~~~vsf~Y~~~~-~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~ 397 (529)
T TIGR02868 320 GV-VPAAGALGLGKPTLELRDLSFGYPGSP-PVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGV 397 (529)
T ss_pred CC-CCCCcccCCCCceEEEEEEEEecCCCC-ceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCE
Confidence 11 111111234567899999999997654 5999999999999999999999999999999999999999999999999
Q ss_pred eCCCCChHHhhhceEEEcCCCccccCcHhhccCCC-CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHH
Q 000432 1326 DITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPL-VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQR 1404 (1513)
Q Consensus 1326 dI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~-~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQR 1404 (1513)
|++++ .+++|++|+||||||+||+|||||||.++ ++++|||+++|++.|+++|+|+++|+||||.|||+|.|||||||
T Consensus 398 ~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQr 476 (529)
T TIGR02868 398 SVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGER 476 (529)
T ss_pred EhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHH
Confidence 99999 99999999999999999999999999986 46899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccCh
Q 000432 1405 QLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRI 1457 (1513)
Q Consensus 1405 Qrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl 1457 (1513)
||||||||++++|+|||||||||+||++||+.|++.+++..+++|+|+||||+
T Consensus 477 QRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 477 QRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 99999999999999999999999999999999999999988999999999995
No 28
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=4.1e-75 Score=744.93 Aligned_cols=547 Identities=19% Similarity=0.276 Sum_probs=456.1
Q ss_pred HHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 000432 945 IILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSV 1024 (1513)
Q Consensus 945 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~l 1024 (1513)
+++++.++..++.+..++++.+..|.... ......++..++++.++..+..++...+......+....++.++++++
T Consensus 23 ~~~~~~i~~~~~~~~~~~~~~~iid~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l 99 (588)
T PRK13657 23 LLAVANVLLAAATFAEPILFGRIIDAISG---KGDIFPLLAAWAGFGLFNIIAGVLVARHADRLAHRRRLAVLTEYFERI 99 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44556667777888888888877765321 112222333444444444444555555555666666667777999999
Q ss_pred hcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1025 HRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVIFIPVTGICIWYQQYYIPT 1104 (1513)
Q Consensus 1025 l~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~~ 1104 (1513)
+++|.++|++.+.|++++|+++|++.+...+...+..++..++..++.+++++..+|+++++++..++++..+..++.+.
T Consensus 100 ~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~l~~~i~~~~~~~ 179 (588)
T PRK13657 100 IQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGIVYTLITTLVMRK 179 (588)
T ss_pred HhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988888888888888888888888889999999887777777777777777777
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1105 ARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLV 1184 (1513)
Q Consensus 1105 ~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 1184 (1513)
.++..+......+...+++.|+++|+.+||+|+.++.+.+++.+..+...+..........+.....+++..+...++.+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (588)
T PRK13657 180 TKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNRAASTITMLAILV 259 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888888888899999999999999999999999998888888887776665555444444444444443333333222
Q ss_pred H-HHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCceEE
Q 000432 1185 V-LVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLVTEECRPPSNWPDVGTIS 1263 (1513)
Q Consensus 1185 ~-~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~ 1263 (1513)
+ ...+..|.+++|.+..++.|...+..++..+...+..+.....+.+|+.++.+.+++.+.. .+..+.. +..+.|+
T Consensus 260 ~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~-~~~~~~~--~~~~~I~ 336 (588)
T PRK13657 260 LGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDP-PGAIDLG--RVKGAVE 336 (588)
T ss_pred HHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCC-CCCCCcC--CCCCeEE
Confidence 2 2334588999999999999999999999999999999999999999999998765442211 1110111 2346899
Q ss_pred EEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEc
Q 000432 1264 FHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIP 1343 (1513)
Q Consensus 1264 f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVp 1343 (1513)
++||+|+|+++ +++|+|+||+++|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++|+|||
T Consensus 337 ~~~vsf~y~~~-~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~~~r~~i~~v~ 415 (588)
T PRK13657 337 FDDVSFSYDNS-RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRASLRRNIAVVF 415 (588)
T ss_pred EEEEEEEeCCC-CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHHHHHhheEEEe
Confidence 99999999754 46999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCcHhhccCCC-CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000432 1344 QDPTLFDGTVRGNLDPL-VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVL 1422 (1513)
Q Consensus 1344 Qdp~LF~gTIR~NLdp~-~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiL 1422 (1513)
|||.+|+|||||||..+ ++.+|++++++++.++++++++++|+|+||.++|+|.+||||||||||||||++++|+||||
T Consensus 416 Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARall~~~~iliL 495 (588)
T PRK13657 416 QDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARALLKDPPILIL 495 (588)
T ss_pred cCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999876 36899999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHHHHHHHh
Q 000432 1423 DEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIKEYS 1499 (1513)
Q Consensus 1423 DEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~~~~ 1499 (1513)
|||||+||++|++.|.+.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|+++ ++.|++|+++..
T Consensus 496 DEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~ 571 (588)
T PRK13657 496 DEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVAR-GGRFAALLRAQG 571 (588)
T ss_pred eCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHC-CChHHHHHHHhh
Confidence 9999999999999999999988889999999999999999999999999999999999999987 699999998654
No 29
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=3.5e-75 Score=745.57 Aligned_cols=566 Identities=21% Similarity=0.305 Sum_probs=470.0
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 928 EVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLVAI 1007 (1513)
Q Consensus 928 ~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~ 1007 (1513)
+.++.|++...+.. .+.+++.++..++.++.++.+....|.............++.+++++.++..++.+++.++...
T Consensus 7 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (576)
T TIGR02204 7 AALWPFVRPYRGRV--LAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTW 84 (576)
T ss_pred HHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556665433322 2334445566677777777777655542111111112233444555556667778888899999
Q ss_pred HHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 000432 1008 TGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVIF 1087 (1513)
Q Consensus 1008 ~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~ 1087 (1513)
.+.+....++..+++++++.|.++|++...|++++|+++|++.++..+...+..++..++.+++.+++++.++|++++++
T Consensus 85 ~~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 164 (576)
T TIGR02204 85 LGERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLV 164 (576)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988766
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Q 000432 1088 IPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEWL 1167 (1513)
Q Consensus 1088 ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl 1167 (1513)
+...++...+...+.+..+...+..........+++.|.++|+++||+|+.|+++.+++.+..+...+..........|.
T Consensus 165 l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (576)
T TIGR02204 165 LLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALL 244 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65555555555556666667777777778889999999999999999999999999988888887777666655555555
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc
Q 000432 1168 CFRLNLLSNFVFAFSLVV-LVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLV 1246 (1513)
Q Consensus 1168 ~~~l~~~~~~~~~~~~~~-~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~ 1246 (1513)
.....++..+...+..++ ...+..|.+++|.+..+..|...+..++..+...+.++.....+.+|+.++++.++|.+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 324 (576)
T TIGR02204 245 TAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAP 324 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 554444433322222222 2234578999999999999999999999999999999999999999999999876553211
Q ss_pred ccCCCCCCCCCCCceEEEEEEEEEEcCCC-CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCe
Q 000432 1247 TEECRPPSNWPDVGTISFHNLQIRYAEHL-PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNV 1325 (1513)
Q Consensus 1247 ~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~-~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGv 1325 (1513)
. ......+|..+.|+|+||+|+|+++. +++|+|+||+|+|||++||+|+||||||||+++|+|+++|++|+|.+||+
T Consensus 325 ~--~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~ 402 (576)
T TIGR02204 325 A--HPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGV 402 (576)
T ss_pred C--CCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCE
Confidence 1 11112234457899999999997543 57999999999999999999999999999999999999999999999999
Q ss_pred eCCCCChHHhhhceEEEcCCCccccCcHhhccCCCC-CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHH
Q 000432 1326 DITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLV-QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQR 1404 (1513)
Q Consensus 1326 dI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~-~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQR 1404 (1513)
|+++++.+++|++++|+||||++|+|||||||.+++ +.+|++++++++++++.++++++|+|+||.++|+|.+||||||
T Consensus 403 ~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~ 482 (576)
T TIGR02204 403 DLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQR 482 (576)
T ss_pred EHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHH
Confidence 999999999999999999999999999999998754 5789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHH
Q 000432 1405 QLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1405 Qrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
||++||||++++|+||+||||||++|.+|++.|.+.|++..+++|+|+||||++.+..||+|++|++|+++|.|+|++|+
T Consensus 483 Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~ 562 (576)
T TIGR02204 483 QRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELI 562 (576)
T ss_pred HHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHH
Confidence 99999999999999999999999999999999999999998999999999999999999999999999999999999999
Q ss_pred hcCChHHHHHHHHH
Q 000432 1485 EREDSFFSQLIKEY 1498 (1513)
Q Consensus 1485 ~~~~~~f~~l~~~~ 1498 (1513)
++ ++.|++|++.+
T Consensus 563 ~~-~~~~~~l~~~~ 575 (576)
T TIGR02204 563 AK-GGLYARLARLQ 575 (576)
T ss_pred Hc-CChHHHHHhhc
Confidence 86 78999998653
No 30
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=1.3e-74 Score=730.13 Aligned_cols=548 Identities=25% Similarity=0.363 Sum_probs=465.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 302 PSIYKAIFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGAR 381 (1513)
Q Consensus 302 ~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~ 381 (1513)
.+.++..++.+|+.+.-.++..++..++.++.|++.+.++|.+--..+. ...+++++++.+..+++.++.....+...
T Consensus 142 ~~~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~--~tL~vl~ig~~~~~l~~~~l~~lr~~~~~ 219 (709)
T COG2274 142 LSWFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDASR--STLTVLAIGLLLAALFEALLRLLRTYLIA 219 (709)
T ss_pred hHhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666667788888888888999999999999999999988654433 34566777788888888888877778888
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 382 QLGLRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFYSN--YMFMLPVQISLAIYILRTNLGLGSL 459 (1513)
Q Consensus 382 ~~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~--~~~~~pl~i~~~l~~L~~~lg~~~l 459 (1513)
+++.|+...+...+|+|.+++|..+++++++||+++++. |.++|.+++.... .+.-.++-++.. .+++.+-+.-++
T Consensus 220 ~~~~rld~~l~~~~~~hll~Lpl~~f~~r~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l-~vm~~ys~~L~l 297 (709)
T COG2274 220 HLGKRLDLELSGRFFRHLLRLPLSYFEKRSVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFL-AVMFLYSWKLTL 297 (709)
T ss_pred HHHHHHhHHHHHHHHHHHHcCcHHHccCCChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 999999999999999999999999999999999999987 9999999986432 222333333333 333434444455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 460 AALAATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSA 539 (1513)
Q Consensus 460 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~ 539 (1513)
++++.+++.+.+..++.+..++..++.++...++.+...|.++||++||..+-|+.+..++++.-.+..+...+......
T Consensus 298 i~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~ 377 (709)
T COG2274 298 IVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLAL 377 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 66666667777778888888888899999999999999999999999999999999999998877777666665555544
Q ss_pred HHHHHHH--HHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 000432 540 TSAFIFW--GSPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQR 617 (1513)
Q Consensus 540 ~~~~~~~--~~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~ 617 (1513)
....... ..-.-+.+++||++.++++.+|.|.++++.++...+..|+..+.+.+..+++++++.+|+.++++.|.+++
T Consensus 378 ~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~ 457 (709)
T COG2274 378 ILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQE 457 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 4433222 22234667899999999999999999999999999999999999999999999999999999999876544
Q ss_pred ccccccCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-
Q 000432 618 DAVEYVPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT- 696 (1513)
Q Consensus 618 ~~~~~~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~- 696 (1513)
........+...+.|+++|++|+|++++ +++|+|+||+|++||++||||+||||||||+|+|+|.|+|.+|+|.+||.
T Consensus 458 ~~~~~~~~~~~~g~I~~~nvsf~y~~~~-~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~d 536 (709)
T COG2274 458 GDKTLIHLPKLQGEIEFENVSFRYGPDD-PPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGVD 536 (709)
T ss_pred cccccccccccCceEEEEEEEEEeCCCC-cchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEe
Confidence 3221122234567899999999998754 48999999999999999999999999999999999999999999999994
Q ss_pred ------------EEEEcCCCcccCccHHHHHccCCCCCc-hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHH
Q 000432 697 ------------KAYVPQSPWILTGNIRENILFGNQYDS-CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQ 763 (1513)
Q Consensus 697 ------------~ayv~Q~~~l~~~ti~eNI~fg~~~~~-~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkq 763 (1513)
++||+|++.+|+|||+|||.+|.|... |+..++++.++.++++..+|.|++|.|||+|.||||||||
T Consensus 537 l~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQrQ 616 (709)
T COG2274 537 LNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQRQ 616 (709)
T ss_pred HHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHHH
Confidence 599999999999999999999998755 6777777778889999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHH
Q 000432 764 RIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELL 843 (1513)
Q Consensus 764 Ri~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~ 843 (1513)
|++||||++++|+|+||||||||||+++++.|.++ +.....++|+|+||||+++++.||+|+||++|+|+++|+|+|++
T Consensus 617 rlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~-L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell 695 (709)
T COG2274 617 RLALARALLSKPKILLLDEATSALDPETEAIILQN-LLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELL 695 (709)
T ss_pred HHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHH-HHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHH
Confidence 99999999999999999999999999998888765 66777899999999999999999999999999999999999999
Q ss_pred hcCccHHHHHHh
Q 000432 844 KQNIGFEVLVGA 855 (1513)
Q Consensus 844 ~~~~~~~~l~~~ 855 (1513)
+.+|.|++++..
T Consensus 696 ~~~g~y~~l~~~ 707 (709)
T COG2274 696 AQGGLYARLYQQ 707 (709)
T ss_pred HhcChHHHHHhc
Confidence 999999988753
No 31
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-75 Score=680.96 Aligned_cols=500 Identities=21% Similarity=0.311 Sum_probs=431.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHH
Q 000432 990 LTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQI 1069 (1513)
Q Consensus 990 l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~ 1069 (1513)
+++...+.-++..+.......++-.++|.++|+++...+..-..+...|+++||+..|++.+|..+-..+...+..+...
T Consensus 67 ~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~ 146 (573)
T COG4987 67 LAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLI 146 (573)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHH
Confidence 35556666667777778888999999999999999999999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHH
Q 000432 1070 LGTIGVMSQVAWQVFVIFIP-VTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLS 1148 (1513)
Q Consensus 1070 ~~~l~v~~~~~~~l~lv~ip-~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~ 1148 (1513)
+++.+.+.+.+|++++.+.. ++++...+...+.+..|...+.-...++.+.+++.|.+.|....+.||++++|.+.+..
T Consensus 147 ~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~ 226 (573)
T COG4987 147 AVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEA 226 (573)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHH
Confidence 88888888999988775433 33334444455556666666666778889999999999999999999999999999999
Q ss_pred HHHhhchhHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q 000432 1149 LIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFA-FSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASII-WNICNAENK 1226 (1513)
Q Consensus 1149 ~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~-~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~-~~~~~le~~ 1226 (1513)
..+...+..........|....+.++..+.+. ..++.......|..+.-.+.+++...+.....+..+. ..+.++...
T Consensus 227 ~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~ 306 (573)
T COG4987 227 TEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQV 306 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHH
Confidence 99999998888999999999988888887666 3334444355565553333333333333444444444 556788889
Q ss_pred HHHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCc-eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHH
Q 000432 1227 MISVERILQYSNLPSEAPLVTEECRPPSNWPDVG-TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTL 1305 (1513)
Q Consensus 1227 ~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g-~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTL 1305 (1513)
..|.+|+.+..+.++|.... ++ ..|..+ .++++||+|+|+++.++||+|+||++++||||||+||||||||||
T Consensus 307 ~~Sa~Rl~~i~~q~~e~~~~-~~-----~~~~~~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTl 380 (573)
T COG4987 307 IASARRLNDILDQKPEVTFP-DE-----QTATTGQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTL 380 (573)
T ss_pred HHHHHHHhhhccCCcccCCC-cc-----ccCCccceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHH
Confidence 99999999998877765432 11 112222 799999999999988899999999999999999999999999999
Q ss_pred HHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCC-CCCCHHHHHHHHHHcCCcHHHHhh
Q 000432 1306 IQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPL-VQYSDKQVWEALDKCQLGDLVRAK 1384 (1513)
Q Consensus 1306 l~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~-~~~sdeei~~aL~~~~l~~~I~~l 1384 (1513)
+++|.|-|+|++|+|..+|++++.++.+++|+.|++++|.++||+||+|+||... .++||||+|+||++++|++++++.
T Consensus 381 lqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~ 460 (573)
T COG4987 381 LQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESA 460 (573)
T ss_pred HHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999754 479999999999999999999999
Q ss_pred hccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcC
Q 000432 1385 EEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSD 1464 (1513)
Q Consensus 1385 p~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~D 1464 (1513)
|+||+|.+||+|.+||||||||++|||+||+++++++|||||.+||++||++|.+.|.+..+|+|+|+||||+.-+..||
T Consensus 461 p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~d 540 (573)
T COG4987 461 PDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMD 540 (573)
T ss_pred hhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEeCCEEeEecChhHHHhcCChHHHHHHH
Q 000432 1465 LVLVLSDGRIAEYDSPTKLLEREDSFFSQLIK 1496 (1513)
Q Consensus 1465 rIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~ 1496 (1513)
||+|||+|+++|+|+|.+|+++ +|.|++|++
T Consensus 541 rIivl~~Gkiie~G~~~~Ll~~-~g~~~~l~q 571 (573)
T COG4987 541 RIIVLDNGKIIEEGTHAELLAN-NGRYKRLYQ 571 (573)
T ss_pred EEEEEECCeeeecCCHHhhhcc-ccHHHHHhc
Confidence 9999999999999999999997 899999975
No 32
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2e-74 Score=739.46 Aligned_cols=544 Identities=20% Similarity=0.235 Sum_probs=425.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 304 IYKAIFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQL 383 (1513)
Q Consensus 304 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 383 (1513)
.++.+.+.+++.+++..++.++..++..+.|++++.++|.+..++... ...+.++++++++.++..++.....+...+.
T Consensus 12 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (588)
T PRK11174 12 WLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPR-EALLPPFILLILLFVLRALLAWLRERVGFKA 90 (588)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566778888889999999999999999999999999764221111 2223334445555566666666667777889
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q 000432 384 GLRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIF-YSNYMFMLPVQISLAIYILRT-NLGLGSLAA 461 (1513)
Q Consensus 384 ~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~~~~~~~pl~i~~~l~~L~~-~lg~~~l~~ 461 (1513)
+.++...++..+|+|.++++..+++++++|+++|++++|++++.+++. .+..++...+.+++++++++. .+.+ +++.
T Consensus 91 ~~~~~~~lr~~~~~~ll~~~~~~~~~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l-~l~~ 169 (588)
T PRK11174 91 GQHIRQQIRQQVLDKLQQLGPAWIQGKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWAA-GLIL 169 (588)
T ss_pred HHHHHHHHHHHHHHHHHhcCchhhccCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence 999999999999999999999999999999999999999999998875 344444444433333332222 2211 2222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHH----HHHHHHHHHHHHHH
Q 000432 462 LAATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESL----RQVECIWLWKSLRL 537 (1513)
Q Consensus 462 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~----R~~E~~~~~~~~~~ 537 (1513)
++++++.+.+...+.++.++..++.++..++..+.+.|.++|+++||.|++|+.+.+++++. ++.+.+..+.....
T Consensus 170 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (588)
T PRK11174 170 LGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLRMAFLS 249 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23333333344566777888888889999999999999999999999999999988887553 33333333322222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 538 SATSAFIFWGSPTFISVVTFGACMLLGIQLTAG---------RVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAA 608 (1513)
Q Consensus 538 ~~~~~~~~~~~p~~v~~~~f~~~~~~~~~Lt~~---------~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~ 608 (1513)
.....++... + .+.++.++++.+. +.+|.| .+++++.+...+..|+..++..+..+.++++|.+||.+
T Consensus 250 ~~~~~~~~~~-~-~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ 326 (588)
T PRK11174 250 SAVLEFFASI-S-IALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAESLVT 326 (588)
T ss_pred HHHHHHHHHH-H-HHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222221111 1 1222234444433 444444 44555567788899999999999999999999999999
Q ss_pred HhcccccccccccccCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCC
Q 000432 609 YLQEDEIQRDAVEYVPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMA 688 (1513)
Q Consensus 609 fL~~~e~~~~~~~~~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~ 688 (1513)
+++.++.++..............|+++|++|.|++ ++++|+|+||+|++|+++||||+||||||||+++|+|++ |++
T Consensus 327 ~l~~~~~~~~~~~~~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~~ 403 (588)
T PRK11174 327 FLETPLAHPQQGEKELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PYQ 403 (588)
T ss_pred HHcCCCcccCCCccccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CCC
Confidence 99876533211111111112346999999998764 357999999999999999999999999999999999999 899
Q ss_pred cEEEECC-------------eEEEEcCCCcccCccHHHHHccCCC-CCchHHHHHHHHHhcHHHHhhccCCCCccccCCC
Q 000432 689 GTVKISG-------------TKAYVPQSPWILTGNIRENILFGNQ-YDSCKYDRTVEACALVKDFELFASGDLTEIGERG 754 (1513)
Q Consensus 689 G~i~~~g-------------~~ayv~Q~~~l~~~ti~eNI~fg~~-~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g 754 (1513)
|+|.++| .++||||+||+|++||||||++|+| .++++++++++.|+++++++.+|+|++|.|||+|
T Consensus 404 G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G 483 (588)
T PRK11174 404 GSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQA 483 (588)
T ss_pred cEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccccCC
Confidence 9999999 4799999999999999999999975 7889999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEE
Q 000432 755 INMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIA 834 (1513)
Q Consensus 755 ~~LSGGQkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~ 834 (1513)
.+|||||||||+||||+++||+||||||||||||++++++|.+ .+....++||+|+||||++.++.||+|++|++|+|+
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~-~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~i~ 562 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQ-ALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQIV 562 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHH-HHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCeEe
Confidence 9999999999999999999999999999999999999998875 677777899999999999999999999999999999
Q ss_pred EecChHHHHhcCccHHHHHHhh
Q 000432 835 QAGRFEELLKQNIGFEVLVGAH 856 (1513)
Q Consensus 835 ~~g~~~~l~~~~~~~~~l~~~~ 856 (1513)
++|+|+|++++++.|.+++..+
T Consensus 563 e~G~~~eL~~~~~~y~~l~~~q 584 (588)
T PRK11174 563 QQGDYAELSQAGGLFATLLAHR 584 (588)
T ss_pred ecCCHHHHHhcchHHHHHHHHh
Confidence 9999999999999999988654
No 33
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=3e-74 Score=733.46 Aligned_cols=563 Identities=21% Similarity=0.291 Sum_probs=459.0
Q ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 929 VYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLVAIT 1008 (1513)
Q Consensus 929 ~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~ 1008 (1513)
.+++|++..++. +.+.+++.++..++.++.|+.+++..|..... . ....++..++++.++..+..++...+....
T Consensus 9 ~l~~~l~~~k~~--~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (585)
T TIGR01192 9 RALSYLNVHKNR--VLLIVIANITLAAITIAEPILFGRIIDAISSK-S--DVLPTLALWAGFGVFNTIAYVLVAREADRL 83 (585)
T ss_pred HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-c--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666644433 23344555667777888888887766643211 1 111222233333334444445555555566
Q ss_pred HHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000432 1009 GLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVIFI 1088 (1513)
Q Consensus 1009 ~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~i 1088 (1513)
+.+...+++.+++++++++|++||+++++|++++|+++|++.+...+...+..++..++.+++.+++++.++|.++++++
T Consensus 84 ~~~~~~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l 163 (585)
T TIGR01192 84 AHGRRATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIVLM 163 (585)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666777789999999999999999999999999999999999988888888888888888888889999999998877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHHHH
Q 000432 1089 PVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEWLC 1168 (1513)
Q Consensus 1089 p~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~ 1168 (1513)
.+++++.++.+.+.+..++..+......+...+++.|+++|+++||+|+.|+++.+++.+..+...+..+.......+..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (585)
T TIGR01192 164 VLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALAS 243 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777777887777778888999999999999999999999998888887777766555444433333333
Q ss_pred HHHHHHHHHHHHHHHHH-HHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcc
Q 000432 1169 FRLNLLSNFVFAFSLVV-LVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLVT 1247 (1513)
Q Consensus 1169 ~~l~~~~~~~~~~~~~~-~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~ 1247 (1513)
....++..+...++.++ ...+..|.+++|.+..++.|...+..++..+...+.++.....+.+|+.++.+.+++.+..
T Consensus 244 ~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~- 322 (585)
T TIGR01192 244 GLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEP- 322 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCC-
Confidence 33333333322222222 2234588999999999999999999999999999999999999999999998765442211
Q ss_pred cCCCCCCCC-CCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCee
Q 000432 1248 EECRPPSNW-PDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVD 1326 (1513)
Q Consensus 1248 ~~~~~~~~w-p~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvd 1326 (1513)
..+ ..+ +..+.|+++||+|+|+++. ++|+|+||+|++||++||||+||||||||+++|.|+++|++|+|.+||+|
T Consensus 323 --~~~-~~~~~~~~~i~~~~v~~~y~~~~-~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~ 398 (585)
T TIGR01192 323 --ADA-PELPNVKGAVEFRHITFEFANSS-QGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGID 398 (585)
T ss_pred --ccC-CCCCCCCCeEEEEEEEEECCCCC-ccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEE
Confidence 111 112 2346899999999997543 58999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHhhhceEEEcCCCccccCcHhhccCCC-CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1327 ITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPL-VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1327 I~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~-~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
+++++.+++|+++++|||||.+|++||||||... .+++|+|++++++.+++++++.++|+|+||.++|+|.+|||||||
T Consensus 399 ~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~q 478 (585)
T TIGR01192 399 INTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQ 478 (585)
T ss_pred hhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHH
Confidence 9999999999999999999999999999999875 467999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHh
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
|++|||||+++|+|||||||||+||.+|++.|++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|++|++
T Consensus 479 rl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 558 (585)
T TIGR01192 479 RLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQ 558 (585)
T ss_pred HHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHH
Confidence 99999999999999999999999999999999999998888999999999999999999999999999999999999998
Q ss_pred cCChHHHHHHHHHhhcc
Q 000432 1486 REDSFFSQLIKEYSMRS 1502 (1513)
Q Consensus 1486 ~~~~~f~~l~~~~~~~~ 1502 (1513)
+ ++.|+++++.+....
T Consensus 559 ~-~~~y~~l~~~~~~~~ 574 (585)
T TIGR01192 559 K-DGRFYKLLRRSGLLT 574 (585)
T ss_pred C-CChHHHHHHhCcccc
Confidence 7 789999998775433
No 34
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.4e-74 Score=735.45 Aligned_cols=513 Identities=21% Similarity=0.254 Sum_probs=436.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHH
Q 000432 982 IVLLVYTLLTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGW 1061 (1513)
Q Consensus 982 ~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~ 1061 (1513)
.++++++++.++..++.+++.++....+.+...+++.++++++++.|++||++.++|++++|+++|++.++..+...+..
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~ 116 (569)
T PRK10789 37 MWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLT 116 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34455555566677777888888888999999999999999999999999999999999999999999999877777777
Q ss_pred HHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHH
Q 000432 1062 CAFSIIQILGTIGVM-SQVAWQVFVIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQED 1140 (1513)
Q Consensus 1062 ~~~~~~~~~~~l~v~-~~~~~~l~lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~ 1140 (1513)
++..++..++.++++ +.++|+++++++..+++..++.+.+.+..++..+......+.+.+++.|+++|+++||+|+.|+
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~ 196 (569)
T PRK10789 117 LVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLED 196 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccH
Confidence 777766666665555 4788988877666555555666666666666666666777889999999999999999999999
Q ss_pred HHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1141 RFTNANLSLIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLVV-LVTLPEGIINPSIAGLAVTYGINLNVLQASIIWN 1219 (1513)
Q Consensus 1141 ~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~-~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~ 1219 (1513)
++.+++.+..+...+..........+..........+...+..++ ...+..|.+++|.+..++.|...+..++..+...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~ 276 (569)
T PRK10789 197 RQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGSWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWM 276 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888888777666655544444443333333332222222222 2234588999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCC
Q 000432 1220 ICNAENKMISVERILQYSNLPSEAPLVTEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTG 1299 (1513)
Q Consensus 1220 ~~~le~~~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTG 1299 (1513)
+.+++....+.+|+.++++.+++.+.. ....+ +..+.|+|+||+|+|+++..++|+|+||+|+|||++||||+||
T Consensus 277 ~~~~~~~~~a~~ri~~ll~~~~~~~~~--~~~~~---~~~~~I~~~~v~~~y~~~~~~~l~~i~~~i~~G~~~~ivG~sG 351 (569)
T PRK10789 277 FNIVERGSAAYSRIRAMLAEAPVVKDG--SEPVP---EGRGELDVNIRQFTYPQTDHPALENVNFTLKPGQMLGICGPTG 351 (569)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcccCC--CCCCC---CCCCcEEEEEEEEECCCCCCccccCeeEEECCCCEEEEECCCC
Confidence 999999999999999999876543211 11111 2356899999999998655579999999999999999999999
Q ss_pred CCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCC-CCCCHHHHHHHHHHcCCc
Q 000432 1300 SGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPL-VQYSDKQVWEALDKCQLG 1378 (1513)
Q Consensus 1300 SGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~-~~~sdeei~~aL~~~~l~ 1378 (1513)
||||||+++|.|+|+|++|+|.+||+|+++++.+++|+++++|||||++|+|||||||.++ .+++|++++++++.++++
T Consensus 352 sGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~ 431 (569)
T PRK10789 352 SGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFSDTVANNIALGRPDATQQEIEHVARLASVH 431 (569)
T ss_pred CCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCH
Confidence 9999999999999999999999999999999999999999999999999999999999876 468999999999999999
Q ss_pred HHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChh
Q 000432 1379 DLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIH 1458 (1513)
Q Consensus 1379 ~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ 1458 (1513)
+++.++|+|+||.++|+|.+||||||||++||||++++|+|||||||||+||+++++.|.+.|++..+++|+|+||||++
T Consensus 432 ~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~ 511 (569)
T PRK10789 432 DDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLS 511 (569)
T ss_pred HHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999888999999999999
Q ss_pred hHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHHHHHHHhh
Q 000432 1459 TVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIKEYSM 1500 (1513)
Q Consensus 1459 ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~~~~~ 1500 (1513)
++..||+|++|++|+++|.|+|++|+++ ++.|++|++.+..
T Consensus 512 ~~~~~d~i~~l~~G~i~~~g~~~~l~~~-~~~y~~l~~~~~~ 552 (569)
T PRK10789 512 ALTEASEILVMQHGHIAQRGNHDQLAQQ-SGWYRDMYRYQQL 552 (569)
T ss_pred HHHcCCEEEEEeCCEEEEecCHHHHHHc-CChHHHHHHHhhh
Confidence 9999999999999999999999999987 6899999986543
No 35
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=6.9e-75 Score=677.02 Aligned_cols=507 Identities=23% Similarity=0.339 Sum_probs=410.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHH
Q 000432 981 NIVLLVYTLLTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLG 1060 (1513)
Q Consensus 981 ~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~ 1060 (1513)
...+..|.+..+++.+|..++...+++..+++-++...+.|.+.+.+.+++|.+..+|.+-+++..-...+...+...+.
T Consensus 74 ~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~ 153 (591)
T KOG0057|consen 74 TALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVF 153 (591)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHH
Confidence 56678899999999999999999999999999999999999999999999999999999988888888888777777777
Q ss_pred HHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchH
Q 000432 1061 WCAFSIIQILGTIGVMS-QVAWQVFVIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQE 1139 (1513)
Q Consensus 1061 ~~~~~~~~~~~~l~v~~-~~~~~l~lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e 1139 (1513)
.++..++.+......+. -..+.++++++.....|..+..+........++....+.....+..-|++.+-.+||+|+.|
T Consensus 154 ~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE 233 (591)
T KOG0057|consen 154 NIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNE 233 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccH
Confidence 77766665554443332 23444444433333333221111111111122222233444556788999999999999999
Q ss_pred HHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HhcCCccCHHHHHHHHHHHHHHHHHHH
Q 000432 1140 DRFTNANLSLIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLVVLV-----TLPEGIINPSIAGLAVTYGINLNVLQA 1214 (1513)
Q Consensus 1140 ~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~-----~~~~g~i~~g~~g~~l~y~~~l~~~l~ 1214 (1513)
++..+++...+.++.+...........+ ++....++.+....+. ....|.++.|.+.+..+...++..+++
T Consensus 234 ~~Ea~~y~~~l~~~~~~~~~~~~sl~~l----nfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~ 309 (591)
T KOG0057|consen 234 EYEASRYDGSLKTYERAGLKYSSSLAFL----NFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLN 309 (591)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHhHHHHH----HHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHH
Confidence 9999998888887777655544433333 3344333333222221 134667888888899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEE
Q 000432 1215 SIIWNICNAENKMISVERILQYSNLPSEAPLVTEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGV 1294 (1513)
Q Consensus 1215 ~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgI 1294 (1513)
.+...++++-.++.-++-.+...+.... ..+. +.+--...|.|+|+||+|.|.|+. +||+|+||+|++||||||
T Consensus 310 ~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~----i~~~-~~~i~~~~~~I~F~dV~f~y~~k~-~iL~gvsf~I~kGekVaI 383 (591)
T KOG0057|consen 310 FLGSVYRELRQALTDMRTLFILLEVDED----IQEA-ALPIELFGGSIEFDDVHFSYGPKR-KVLKGVSFTIPKGEKVAI 383 (591)
T ss_pred HHHHHHHHHHHHHHhHHHHHhhhhhhhh----hhhc-cCCcccCCCcEEEEeeEEEeCCCC-ceecceeEEecCCCEEEE
Confidence 9999999988888777666554322111 1111 111123457899999999998764 599999999999999999
Q ss_pred EcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCCC-CCCHHHHHHHHH
Q 000432 1295 VGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLV-QYSDKQVWEALD 1373 (1513)
Q Consensus 1295 VGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~-~~sdeei~~aL~ 1373 (1513)
||++||||||++++|+||+| ++|+|+|||+||++++++.+|+.||+||||..||++||-+||..++ .++|||+.+++|
T Consensus 384 vG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k 462 (591)
T KOG0057|consen 384 VGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACK 462 (591)
T ss_pred ECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHH
Confidence 99999999999999999999 9999999999999999999999999999999999999999998764 789999999999
Q ss_pred HcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEe
Q 000432 1374 KCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTI 1453 (1513)
Q Consensus 1374 ~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~I 1453 (1513)
++++||.+.++|+||+|.|||+|..||||||||++||||+||+|+|+++|||||+||.+||+.|.+.|.....++|+|+|
T Consensus 463 ~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~I 542 (591)
T KOG0057|consen 463 RAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMI 542 (591)
T ss_pred HcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998899999999
Q ss_pred ccChhhHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHHHHHHHh
Q 000432 1454 AHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIKEYS 1499 (1513)
Q Consensus 1454 AHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~~~~ 1499 (1513)
+||++++++||+|+|||+|+|+|+|+|+||++ +++.|+++|..+.
T Consensus 543 vH~l~ll~~~DkI~~l~nG~v~e~gth~ell~-~s~~~~~~w~~~~ 587 (591)
T KOG0057|consen 543 VHRLDLLKDFDKIIVLDNGTVKEYGTHSELLA-PSELYADLWTTQT 587 (591)
T ss_pred EecchhHhcCCEEEEEECCeeEEeccHHHHhh-hhhHHHHHhcccc
Confidence 99999999999999999999999999999999 5899998886543
No 36
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1e-73 Score=723.94 Aligned_cols=519 Identities=21% Similarity=0.280 Sum_probs=435.0
Q ss_pred HHHHHHHHHHHHHhhhhhhcccCCCCCCCCCC-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q 000432 946 ILLAQSSFQVLQVASNYWMAWASPPTSDGEPA-LGMNIVLLVYTLLTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSV 1024 (1513)
Q Consensus 946 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~l 1024 (1513)
.+++.++..++.++.++.+++..|........ .....+++.++++.++..++.+++.++....+.+...+++.++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~l 87 (529)
T TIGR02857 8 LGLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLLAAV 87 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566677777788777776653111111 12234455666677778888999999999999999999999999999
Q ss_pred hcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1025 HRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVIFIPVTGICIWYQQYYIPT 1104 (1513)
Q Consensus 1025 l~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~~ 1104 (1513)
++.|.++|++.++|++++|+++|++.++..+...+..++..++.+++.+++++..+|.++++++...++..++...+.+.
T Consensus 88 ~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~~~~~~~~ 167 (529)
T TIGR02857 88 AALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIFMILIGWA 167 (529)
T ss_pred HhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999989999988888888899999999988776655444444444444455
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000432 1105 ARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSL- 1183 (1513)
Q Consensus 1105 ~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~- 1183 (1513)
.++..+......+...+++.|+++|+++||+|+.|+++.+++.+..+...+..........+.....+++..+...+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (529)
T TIGR02857 168 AQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATLSVALVAV 247 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555556677888999999999999999999999999988888777776665555555555555555544333322
Q ss_pred HHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCceEE
Q 000432 1184 VVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLVTEECRPPSNWPDVGTIS 1263 (1513)
Q Consensus 1184 ~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~ 1263 (1513)
+....+..|.+++|.+..++.|...+..++..+...+..++....+.+|+.++++.+++.+. . .+...+..+.|+
T Consensus 248 ~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~---~--~~~~~~~~~~i~ 322 (529)
T TIGR02857 248 YIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAG---K--APVTAAPAPSLE 322 (529)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC---C--cCCCCCCCCeEE
Confidence 22233347889999999999999999999999999999999999999999999985543221 1 111122346899
Q ss_pred EEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEc
Q 000432 1264 FHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIP 1343 (1513)
Q Consensus 1264 f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVp 1343 (1513)
|+||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+||+|+++++.+++|+++++||
T Consensus 323 ~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~i~~v~ 402 (529)
T TIGR02857 323 FSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQIAWVP 402 (529)
T ss_pred EEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhheEEEc
Confidence 99999999876557999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCcHhhccCCC-CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000432 1344 QDPTLFDGTVRGNLDPL-VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVL 1422 (1513)
Q Consensus 1344 Qdp~LF~gTIR~NLdp~-~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiL 1422 (1513)
|||++|+|||||||... .+++|+++++|++.++++++++++|+||||.++|+|.+||||||||++||||++++|+||+|
T Consensus 403 Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~~ilil 482 (529)
T TIGR02857 403 QHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDAPLLLL 482 (529)
T ss_pred CCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99999999999999875 46899999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEE
Q 000432 1423 DEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVL 1469 (1513)
Q Consensus 1423 DEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVL 1469 (1513)
|||||+||++|++.|++.|++..+++|+|+||||+++++.||+|+||
T Consensus 483 DE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 483 DEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred eCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 99999999999999999999988999999999999999999999986
No 37
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.2e-75 Score=661.91 Aligned_cols=491 Identities=23% Similarity=0.344 Sum_probs=419.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 000432 1001 RAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGV-MSQV 1079 (1513)
Q Consensus 1001 ~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v-~~~~ 1079 (1513)
|..++...+..+.+.+--+.|.|+.++.+.|+-+..+|-+..-......-++..+...+...+..++.+....++ ....
T Consensus 2 r~~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~ 81 (497)
T COG5265 2 RDRLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVY 81 (497)
T ss_pred chHhhhHHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhc
Confidence 344566777888888888999999999999999888876554444444555555666666666666665544444 3457
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHH
Q 000432 1080 AWQVFVIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFH 1159 (1513)
Q Consensus 1080 ~~~l~lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~ 1159 (1513)
+|+++.+.+..+++|.++......-.-..+|....+.+...+.-.+++-+.+|+|.|+.|+.+..++...++.+.++...
T Consensus 82 ~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k 161 (497)
T COG5265 82 GWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIK 161 (497)
T ss_pred ccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHH
Confidence 88888887777776666544333333344555556667777888899999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000432 1160 NVSAMEWLCFRLNLLSNFVFAFSLVV-LVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSN 1238 (1513)
Q Consensus 1160 ~~~~~~wl~~~l~~~~~~~~~~~~~~-~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~ 1238 (1513)
.+....|+++.-..+........... ...+..|.++.|.+...-+|..++..+++.+...+.++.+.....|+..+.++
T Consensus 162 ~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~ 241 (497)
T COG5265 162 VHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLD 241 (497)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhc
Confidence 88888888776655544333322222 12356889999999999999999999999999999999999999999999998
Q ss_pred CCCCCCCcccCCCCCCCCC-CCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCC
Q 000432 1239 LPSEAPLVTEECRPPSNWP-DVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTM 1317 (1513)
Q Consensus 1239 ~~~e~~~~~~~~~~~~~wp-~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~ 1317 (1513)
.+.|.. +....++-|| ..|.|.|+||+|.|.+..| +|+|+||++++|+++||||++|+||||+.++|+|||++++
T Consensus 242 ~~~~v~---d~pda~~L~~~~~g~v~F~~V~F~y~~~r~-iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~s 317 (497)
T COG5265 242 VEAEVS---DAPDAPPLWPVRLGAVAFINVSFAYDPRRP-ILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNS 317 (497)
T ss_pred cchhhc---cCCCCccccccccceEEEEEEEeeccccch-hhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcC
Confidence 776643 3333455674 4689999999999998864 9999999999999999999999999999999999999999
Q ss_pred cEEEEcCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCCC-CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCC
Q 000432 1318 GSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLV-QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENG 1396 (1513)
Q Consensus 1318 G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~-~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G 1396 (1513)
|.|.|||+||+++..+.||+.||+||||.+||+.|+..|+...+ +.|++|++.|++.+++++||+++|+||||.|||+|
T Consensus 318 G~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgerg 397 (497)
T COG5265 318 GSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERG 397 (497)
T ss_pred ceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhe
Confidence 99999999999999999999999999999999999999998764 79999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeE
Q 000432 1397 ENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAE 1476 (1513)
Q Consensus 1397 ~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE 1476 (1513)
-.||||||||++|||++||+|+||+||||||+||..||+.||.+|++..+++|.++|||||+||.|+|.|+||++|+|+|
T Consensus 398 lklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~e 477 (497)
T COG5265 398 LKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVE 477 (497)
T ss_pred eeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecChhHHHhcCChHHHHHHH
Q 000432 1477 YDSPTKLLEREDSFFSQLIK 1496 (1513)
Q Consensus 1477 ~Gtp~eLl~~~~~~f~~l~~ 1496 (1513)
.|+|+||+++ +|.|++||.
T Consensus 478 rg~h~~ll~~-~g~ya~mw~ 496 (497)
T COG5265 478 RGTHEELLAA-GGLYAEMWR 496 (497)
T ss_pred cCcHHHHHHc-CChHHHHhc
Confidence 9999999998 899999985
No 38
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=4e-71 Score=719.76 Aligned_cols=543 Identities=21% Similarity=0.258 Sum_probs=444.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 303 SIYKAIFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQ 382 (1513)
Q Consensus 303 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~ 382 (1513)
.+++..++.+++.++...++.++..++.++.|++++.++|.+...... ...+.++++++++.++..++.....+...+
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (686)
T TIGR03797 125 DLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDADR--SLLVQIALALLAAAVGAAAFQLAQSLAVLR 202 (686)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355555667788888888899999999999999999999987643222 223344555555566666666666777788
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 383 LGLRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFYS--NYMFMLPVQISLAIYILRTNLGLGSLA 460 (1513)
Q Consensus 383 ~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~--~~~~~~pl~i~~~l~~L~~~lg~~~l~ 460 (1513)
++.++...++..+|+|.++++..+++++++|+++++++ |++.+.+++... ..+...++.+ +++++++..-++.+++
T Consensus 203 ~~~~~~~~l~~~~~~~ll~~~~~~~~~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~~l~li 280 (686)
T TIGR03797 203 LETRMDASLQAAVWDRLLRLPVSFFRQYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFAL-LNLGLMFYYSWKLALV 280 (686)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHCCCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999997 899999876532 2223333332 3333333333333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 461 ALAATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSAT 540 (1513)
Q Consensus 461 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~ 540 (1513)
.++++++.+++...+.+..++..++.++..+++.+.+.|.++|+++||.++.|+.+.+++++..++..+...+.......
T Consensus 281 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (686)
T TIGR03797 281 AVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQRIENL 360 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444455556667778888888899999999999999999999999999999999888877666555544444444333
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 000432 541 SAFIFWGS--PTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRD 618 (1513)
Q Consensus 541 ~~~~~~~~--p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~ 618 (1513)
...+.... ...+.++.+|++.+.++.+|.|.++++.+++..+..|+..++..+..+++++++++|+.++++.+++.+.
T Consensus 361 ~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~ 440 (686)
T TIGR03797 361 LTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALPEVDE 440 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 32222111 2234456778888889999999999999999999999999999999999999999999999987653322
Q ss_pred cccccCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--
Q 000432 619 AVEYVPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-- 696 (1513)
Q Consensus 619 ~~~~~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-- 696 (1513)
.. ..+ ......|+++|++|+|+++ ++++|+|+||+|++||++||||+||||||||+++|+|+++|++|+|.+||.
T Consensus 441 ~~-~~~-~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~i 517 (686)
T TIGR03797 441 AK-TDP-GKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYDGQDL 517 (686)
T ss_pred Cc-CCC-CCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEc
Confidence 11 111 1223579999999999753 468999999999999999999999999999999999999999999999983
Q ss_pred -----------EEEEcCCCcccCccHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHH
Q 000432 697 -----------KAYVPQSPWILTGNIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRI 765 (1513)
Q Consensus 697 -----------~ayv~Q~~~l~~~ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi 765 (1513)
++||||+|++|+|||+|||.+|+|.++++..++++.|++.++++.+|+|++|.|||+|.+|||||||||
T Consensus 518 ~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGGQrQRi 597 (686)
T TIGR03797 518 AGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAPLTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGGQRQRL 597 (686)
T ss_pred CcCCHHHHHhccEEEccCCccCcccHHHHHhcCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence 599999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000432 766 QIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 766 ~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
+||||++++|+|+|||||||+||+++++++.+. ++.. ++|+|+||||++.++.||+|++|++|+|++.|+|+|++++
T Consensus 598 alARAll~~p~iLiLDEpTS~LD~~te~~i~~~-L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~Ll~~ 674 (686)
T TIGR03797 598 LIARALVRKPRILLFDEATSALDNRTQAIVSES-LERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDELMAR 674 (686)
T ss_pred HHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH-HHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHHHHhC
Confidence 999999999999999999999999999988765 5543 6899999999999999999999999999999999999999
Q ss_pred CccHHHHHHh
Q 000432 846 NIGFEVLVGA 855 (1513)
Q Consensus 846 ~~~~~~l~~~ 855 (1513)
++.|.++++.
T Consensus 675 ~~~y~~l~~~ 684 (686)
T TIGR03797 675 EGLFAQLARR 684 (686)
T ss_pred CcHHHHHHHh
Confidence 9999988753
No 39
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=3.7e-71 Score=723.19 Aligned_cols=543 Identities=19% Similarity=0.232 Sum_probs=445.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 304 IYKAIFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQL 383 (1513)
Q Consensus 304 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 383 (1513)
.++..++.+++.+....++.++..++.++.|++++.++|.+...... ...+.++++++++.++..++.....+...++
T Consensus 144 ~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (710)
T TIGR03796 144 ALWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQ--DWLRPLLLGMGLTALLQGVLTWLQLYYLRRL 221 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445566777778888888999999999999999999977643322 2233444555555666667777777778899
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 384 GLRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFY-SNYMFMLPVQISLAIYILRTNLGLGSLAAL 462 (1513)
Q Consensus 384 ~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~l~~L~~~lg~~~l~~l 462 (1513)
+.++...++..+|+|.++++..+++++++|+++++++.| +.+.+++.. +.......+.+++.+++++..-++.+++.+
T Consensus 222 ~~~~~~~l~~~~~~~ll~l~~~~~~~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l 300 (710)
T TIGR03796 222 QIKLAVGMSARFLWHILRLPVRFFAQRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVLTLIGI 300 (710)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHcCCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999988 678887643 333333333444444444433333344444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 463 AATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSA 542 (1513)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~ 542 (1513)
+.+++.+.+...+.+..++..++.++..+++.+.+.|.++|+++||.+++|+.+.+++++...++.+...+.........
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (710)
T TIGR03796 301 AFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVLTQILG 380 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555666777888888888899999999999999999999999999999999998887777766555554444333
Q ss_pred HHHH--HHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccc
Q 000432 543 FIFW--GSPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAV 620 (1513)
Q Consensus 543 ~~~~--~~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~ 620 (1513)
.+.. .....+.++.+|++.+.++.+|.|.++++..++..+..|+..++..+..+.+++++++|+.++++.++..+...
T Consensus 381 ~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~~~ 460 (710)
T TIGR03796 381 VLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVDPLLEE 460 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Confidence 2211 11233456778888889999999999999999999999999999999999999999999999998765432211
Q ss_pred ----c--ccCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEEC
Q 000432 621 ----E--YVPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKIS 694 (1513)
Q Consensus 621 ----~--~~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~ 694 (1513)
. ..+.......|+++|++|+|+++ ++++|+|+||+|++||++||||+||||||||+++|+|+++|++|+|.+|
T Consensus 461 ~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~id 539 (710)
T TIGR03796 461 EEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGEILFD 539 (710)
T ss_pred ccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEC
Confidence 0 11101224579999999999753 4689999999999999999999999999999999999999999999999
Q ss_pred Ce-------------EEEEcCCCcccCccHHHHHccCCC-CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChH
Q 000432 695 GT-------------KAYVPQSPWILTGNIRENILFGNQ-YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGG 760 (1513)
Q Consensus 695 g~-------------~ayv~Q~~~l~~~ti~eNI~fg~~-~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGG 760 (1513)
|. ++||||+|++|++||||||.++.+ .+++++.++++.+++.++++.+|+|++|.|||+|.+||||
T Consensus 540 g~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~LSGG 619 (710)
T TIGR03796 540 GIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGANLSGG 619 (710)
T ss_pred CEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCCCCHH
Confidence 83 699999999999999999998864 6788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChH
Q 000432 761 QKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFE 840 (1513)
Q Consensus 761 QkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~ 840 (1513)
|||||+||||++++|+|+||||||||||+++++++++.+ .. .++|+|+||||++.++.||+|++|++|+|++.|+|+
T Consensus 620 QrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l-~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G~~~ 696 (710)
T TIGR03796 620 QRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNL-RR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRGTHE 696 (710)
T ss_pred HHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHH-Hh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEecCHH
Confidence 999999999999999999999999999999999998754 33 589999999999999999999999999999999999
Q ss_pred HHHhcCccHHHHH
Q 000432 841 ELLKQNIGFEVLV 853 (1513)
Q Consensus 841 ~l~~~~~~~~~l~ 853 (1513)
|+++.++.|.+++
T Consensus 697 ~Ll~~~~~y~~l~ 709 (710)
T TIGR03796 697 ELWAVGGAYARLI 709 (710)
T ss_pred HHHHcCCcHHHHh
Confidence 9999999998875
No 40
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=7e-71 Score=716.78 Aligned_cols=538 Identities=20% Similarity=0.228 Sum_probs=423.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 309 FFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQLGLRLR 388 (1513)
Q Consensus 309 ~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir 388 (1513)
++.+|+.+....++.++..++..+.|++++.++|.+..+.+.. .....+..+++..++..++.....+.....+.++.
T Consensus 156 ~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 233 (711)
T TIGR00958 156 SGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPP--ALASAIFFMCLLSIASSVSAGLRGGSFNYTMARIN 233 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666778888899999999999999999999886433211 11111122222333333333333344456777888
Q ss_pred HHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 389 AALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFY-SNYMFMLPVQISLAIYILRTNLGLGSLAALAATLT 467 (1513)
Q Consensus 389 ~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~l~~L~~~lg~~~l~~l~~~~~ 467 (1513)
..++..+|++.++.+..++++.++|+++|++++|++.+.+.+.. +..++...+++++++++++..-+..+++.++.+++
T Consensus 234 ~~lr~~l~~~ll~~~~~~f~~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l~l~~l~~~~l 313 (711)
T TIGR00958 234 LRIREDLFRSLLRQDLGFFDENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRLTMVTLINLPL 313 (711)
T ss_pred HHHHHHHHHHHHcCCHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 88889999999999999999999999999999999999987753 44444444455444444333222222333333334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Q 000432 468 VMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSAFIF-- 545 (1513)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~~~~-- 545 (1513)
.+.+...+.+..++..++.++..++..+.+.|.++|+++||.|++|+.+.+++++..++..+...+.....+......
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (711)
T TIGR00958 314 VFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALAYAGYLWTTSV 393 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444556677777888888888888999999999999999999999999888777655544333333222222221111
Q ss_pred HHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCC
Q 000432 546 WGSPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAVEYVPK 625 (1513)
Q Consensus 546 ~~~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~ 625 (1513)
......+.++.+|.+.+..+.+|+|.+++++.+...+..|+..++..+..+.+++++.+|+.++++.++..+......+
T Consensus 394 ~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~~~- 472 (711)
T TIGR00958 394 LGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPNIPLTGTLAP- 472 (711)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCC-
Confidence 1112334456778888889999999999999999999999999999999999999999999999987654322111111
Q ss_pred CCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC----------
Q 000432 626 GRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG---------- 695 (1513)
Q Consensus 626 ~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g---------- 695 (1513)
.+....|+++|++|+|++++++++|+|+||+|++||++|||||||||||||+++|+|+++|++|+|.+||
T Consensus 473 ~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~~~~~~ 552 (711)
T TIGR00958 473 LNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLDGVPLVQYDHHY 552 (711)
T ss_pred CCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEHHhcCHHH
Confidence 1234579999999999864456899999999999999999999999999999999999999999999998
Q ss_pred ---eEEEEcCCCcccCccHHHHHccCCC-CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHH
Q 000432 696 ---TKAYVPQSPWILTGNIRENILFGNQ-YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAV 771 (1513)
Q Consensus 696 ---~~ayv~Q~~~l~~~ti~eNI~fg~~-~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal 771 (1513)
.++||||+|++|++||||||.+|.+ .++++..++++.+++.++++.+|+|++|.+||+|.+|||||||||+||||+
T Consensus 553 lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQkQRlalARAL 632 (711)
T TIGR00958 553 LHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGGQKQRIAIARAL 632 (711)
T ss_pred HHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHHHHHHHHHHHHH
Confidence 3699999999999999999999975 567889999999999999999999999999999999999999999999999
Q ss_pred hcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHHH
Q 000432 772 YQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQNIGFEV 851 (1513)
Q Consensus 772 ~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~ 851 (1513)
+++|+|+||||||||||+++++.+.+ ....++||+|+||||++.++.||+|++|++|+|++.|+|+||+++++.|++
T Consensus 633 l~~p~ILILDEpTSaLD~~te~~i~~---~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~eL~~~~~~y~~ 709 (711)
T TIGR00958 633 VRKPRVLILDEATSALDAECEQLLQE---SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQLMEDQGCYKH 709 (711)
T ss_pred hcCCCEEEEEccccccCHHHHHHHHH---hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHHHHhCCCchHh
Confidence 99999999999999999999888876 223478999999999999999999999999999999999999999888876
Q ss_pred H
Q 000432 852 L 852 (1513)
Q Consensus 852 l 852 (1513)
+
T Consensus 710 l 710 (711)
T TIGR00958 710 L 710 (711)
T ss_pred c
Confidence 5
No 41
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=8.7e-72 Score=761.11 Aligned_cols=569 Identities=18% Similarity=0.211 Sum_probs=456.3
Q ss_pred cccchHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 000432 923 GSIGKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRA 1002 (1513)
Q Consensus 923 g~v~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~ 1002 (1513)
..+++....+|....... .+.+.+++.++..+.....++.+...+|.... ......+++.+++++++..++.+++.
T Consensus 43 ~~~~~~~~~~~~~~~~~~-~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~ 118 (1466)
T PTZ00265 43 QKIPFFLPFKCLPASHRK-LLGVSFVCATISGGTLPFFVSVFGVIMKNMNL---GENVNDIIFSLVLIGIFQFILSFISS 118 (1466)
T ss_pred ccccHHHHHhcCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445555555554432222 22333344444445555555555554443210 11223445566777788889999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000432 1003 MLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQ 1082 (1513)
Q Consensus 1003 ~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~ 1082 (1513)
++..+.+.+..++++.+++++++++|++|||..+.|++.+|++.|++.+...+...+..++..++.+++.++++++.+|.
T Consensus 119 ~~~~~~~~~~~~~lR~~~~~~ll~~~~~~fd~~~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~ 198 (1466)
T PTZ00265 119 FCMDVVTTKILKTLKLEFLKSVFYQDGQFHDNNPGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNAR 198 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHH
Q 000432 1083 VFVIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVS 1162 (1513)
Q Consensus 1083 l~lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~ 1162 (1513)
++++++.++++++++...+.+..+...+......+...+.+.|+++|++|||+|+.|+++.+++.+..+...+.......
T Consensus 199 Lalv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~ 278 (1466)
T PTZ00265 199 LTLCITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANF 278 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99887777666666666666666767777777778899999999999999999999999999998877777766555544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HhcC--------CccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1163 AMEWLCFRLNLLSNFVFAFSLVVLV-TLPE--------GIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERI 1233 (1513)
Q Consensus 1163 ~~~wl~~~l~~~~~~~~~~~~~~~~-~~~~--------g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi 1233 (1513)
...+......++..+..+++.++.. .+.. +.+++|.+..++.+.+.....+..+...+..+.....|.+|+
T Consensus 279 ~~~~~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri 358 (1466)
T PTZ00265 279 MESLHIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSL 358 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444333344433333333333322 1223 246666655555444443444455666778899999999999
Q ss_pred HHhcCCCCCCCCcccCCCCCCCCCCCceEEEEEEEEEEcCCC-CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcc
Q 000432 1234 LQYSNLPSEAPLVTEECRPPSNWPDVGTISFHNLQIRYAEHL-PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRI 1312 (1513)
Q Consensus 1234 ~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~-~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl 1312 (1513)
.+.++.+++.+.. ++ ....|..+.|+|+||+|+|+... .+||+|+||+|++||++||||+||||||||+++|.|+
T Consensus 359 ~~ii~~~~~~~~~-~~---~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl 434 (1466)
T PTZ00265 359 YEIINRKPLVENN-DD---GKKLKDIKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERL 434 (1466)
T ss_pred HHHHcCCCCCCCC-CC---CccCCCCCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHh
Confidence 9999876653211 11 11123345899999999997532 3699999999999999999999999999999999999
Q ss_pred CCCCCcEEEE-cCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCCC------------------------------
Q 000432 1313 VEPTMGSIII-DNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLV------------------------------ 1361 (1513)
Q Consensus 1313 ~ep~~G~I~I-DGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~------------------------------ 1361 (1513)
|+|++|+|++ ||.|+++++.+++|++|++|||+|.||++||+|||.+..
T Consensus 435 ~~p~~G~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (1466)
T PTZ00265 435 YDPTEGDIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSC 514 (1466)
T ss_pred ccCCCCeEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccc
Confidence 9999999999 579999999999999999999999999999999997521
Q ss_pred ----------------------------CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1362 ----------------------------QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1362 ----------------------------~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+.+|+++++|++++++++++.++|+||||.|+++|.+||||||||++|||||
T Consensus 515 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAl 594 (1466)
T PTZ00265 515 RAKCAGDLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAI 594 (1466)
T ss_pred cccccchhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHH
Confidence 3578999999999999999999999999999999999999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCC-------------------
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVIDSDLVLVLSDG------------------- 1472 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~~DrIlVLd~G------------------- 1472 (1513)
+++|+|||||||||+||+++++.|++.|++.. +++|+|+||||++++..||+|+||++|
T Consensus 595 l~~P~ILlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~ 674 (1466)
T PTZ00265 595 IRNPKILILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDN 674 (1466)
T ss_pred hcCCCEEEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccccccc
Confidence 99999999999999999999999999999875 489999999999999999999999986
Q ss_pred ----------------------------EEeEecChhHHHhcCChHHHHHHHHHh
Q 000432 1473 ----------------------------RIAEYDSPTKLLEREDSFFSQLIKEYS 1499 (1513)
Q Consensus 1473 ----------------------------~IvE~Gtp~eLl~~~~~~f~~l~~~~~ 1499 (1513)
+|+|+|||+||+++++|.|+.|++.+.
T Consensus 675 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~~g~y~~l~~~q~ 729 (1466)
T PTZ00265 675 KENNNKNNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNKNGIYYTMINNQK 729 (1466)
T ss_pred cccccccccccccccccccccccccCCceeEeeCCHHHHHhccCCcHHHHHhhhc
Confidence 599999999999866899999997653
No 42
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=4e-71 Score=701.37 Aligned_cols=529 Identities=19% Similarity=0.163 Sum_probs=429.0
Q ss_pred HHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q 000432 946 ILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVH 1025 (1513)
Q Consensus 946 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll 1025 (1513)
.+++.++..++.++.|+.+++..|.............++.+++++.++..++.+++.++....+.+....++.+++++++
T Consensus 11 ~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll 90 (544)
T TIGR01842 11 VGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIFAASF 90 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34445566677777788777666643211111122334555666667778888999999999999999999999999999
Q ss_pred cCCcccccccChhHHHHHHhcchHHHhHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1026 RAPMAFFDSTPTGRILNRASNDQSVLDLELAG-RLGWCAFSIIQILGTIGVMSQVAWQVFVIFIPVTGICIWYQQYYIPT 1104 (1513)
Q Consensus 1026 ~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~-~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~~ 1104 (1513)
+.|+.. .|..++++++|++.++..+.. .+..++..++.++ .++++++.+|+++++++..+++.+.+..++.+.
T Consensus 91 ~~~~~~-----~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~i~~~~~~~ 164 (544)
T TIGR01842 91 SATLRR-----GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVGLALLNNRA 164 (544)
T ss_pred cCcccC-----ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhHH
Confidence 999842 366789999999999988776 4444454444443 456788889988776554444444444444444
Q ss_pred HHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1105 ARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLV 1184 (1513)
Q Consensus 1105 ~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~ 1184 (1513)
.++..+......+...+++.|+++|+++||+|+.|+.+.+++.+..++..+..........+......++..+...+..+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (544)
T TIGR01842 165 TKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRIVLQSLVLG 244 (544)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555556677788899999999999999999999999998888877766655544444433333333333322222222
Q ss_pred H-HHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCceEE
Q 000432 1185 V-LVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLVTEECRPPSNWPDVGTIS 1263 (1513)
Q Consensus 1185 ~-~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~ 1263 (1513)
+ ...+..|.+++|.+..++.|...+..++..+...+.+++....+.+|+.++++.++|.+. ....+ +..+.|+
T Consensus 245 ~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~---~~~~~---~~~~~i~ 318 (544)
T TIGR01842 245 LGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDP---AMPLP---EPEGHLS 318 (544)
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccC---CCCCC---CCCCeEE
Confidence 2 233458899999999999999999999999999999999999999999999987655321 11111 2346899
Q ss_pred EEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEc
Q 000432 1264 FHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIP 1343 (1513)
Q Consensus 1264 f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVp 1343 (1513)
++||+|+|+++.+++|+|+||+|+|||++||||+||||||||+++|+|+++|++|+|.+||+|+.+++.+.+|+++++||
T Consensus 319 ~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~ 398 (544)
T TIGR01842 319 VENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGKHIGYLP 398 (544)
T ss_pred EEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhhheEEec
Confidence 99999999765557999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCcHhhccCCCC-CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000432 1344 QDPTLFDGTVRGNLDPLV-QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVL 1422 (1513)
Q Consensus 1344 Qdp~LF~gTIR~NLdp~~-~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiL 1422 (1513)
|||++|++|+||||..++ +++|++++++++.++++++++++|+|+||.++|+|.+||||||||++||||++++|+||||
T Consensus 399 q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~~~ilil 478 (544)
T TIGR01842 399 QDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGDPKLVVL 478 (544)
T ss_pred CCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999999999998554 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhc
Q 000432 1423 DEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1423 DEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
|||||+||++|++.|.+.|++.. +++|+|+||||++++..||+|++|++|+++|.|+|+||+++
T Consensus 479 DEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 543 (544)
T TIGR01842 479 DEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLAK 543 (544)
T ss_pred eCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc
Confidence 99999999999999999999875 68999999999999999999999999999999999999863
No 43
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=2.3e-70 Score=713.49 Aligned_cols=536 Identities=24% Similarity=0.333 Sum_probs=440.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 303 SIYKAIFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQ 382 (1513)
Q Consensus 303 ~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~ 382 (1513)
+.++..++.+++.+....++.++..++.++.|++++.++|.+...... ...+.++++++++.++..++.....+...+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (694)
T TIGR03375 136 HWFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAF--ETLWVLAIGVALAIVFDFVLKTLRSYFLDV 213 (694)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcH--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556677888888888889999999999999999999987533222 223334444444555566666666677788
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 383 LGLRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFYS--NYMFMLPVQISLAIYILRTNLGLGSLA 460 (1513)
Q Consensus 383 ~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~--~~~~~~pl~i~~~l~~L~~~lg~~~l~ 460 (1513)
++.++...++..+|+|.++++..+ .++++|++++++ +|++.+.+++... ..+...+..++..+ +++..-++.+++
T Consensus 214 ~~~~~~~~l~~~~~~~ll~l~~~~-~~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~l~li 290 (694)
T TIGR03375 214 AGKKADLILSAKLFERVLGLRMEA-RPASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLL-VIAIIGGPLVWV 290 (694)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc-CCCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHH-HHHHHHhHHHHH
Confidence 999999999999999999999987 678999999999 7999999987532 22333333333333 333322333444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 461 ALAATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSAT 540 (1513)
Q Consensus 461 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~ 540 (1513)
.++++++.+++...+.+..++..++.++..+++.+.+.|.++|+++||.+++|+.+.+++++..++..+...+.......
T Consensus 291 ~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (694)
T TIGR03375 291 PLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSNL 370 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555555666677788888889999999999999999999999999999999999999988877776666655555444
Q ss_pred HHHHHHHH--HHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 000432 541 SAFIFWGS--PTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRD 618 (1513)
Q Consensus 541 ~~~~~~~~--p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~ 618 (1513)
...+.... ...+.++++|++.+..+.+|+|.+++++.++..+..|+..++..+..+.+++++.+|+.++++.++..+.
T Consensus 371 ~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~~ 450 (694)
T TIGR03375 371 ATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERPE 450 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 33222221 2234456788888899999999999999999999999999999999999999999999999987654322
Q ss_pred cccccCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC---
Q 000432 619 AVEYVPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG--- 695 (1513)
Q Consensus 619 ~~~~~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g--- 695 (1513)
.....+.......|+++|++|+|+++ ++++|+|+||+|++||++||||+||||||||+++|+|+++|++|+|.+||
T Consensus 451 ~~~~~~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg~~l 529 (694)
T TIGR03375 451 GTRFLHRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDGVDI 529 (694)
T ss_pred CCCCCCCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEh
Confidence 11111111234579999999999743 46899999999999999999999999999999999999999999999998
Q ss_pred ----------eEEEEcCCCcccCccHHHHHccCCC-CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHH
Q 000432 696 ----------TKAYVPQSPWILTGNIRENILFGNQ-YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQR 764 (1513)
Q Consensus 696 ----------~~ayv~Q~~~l~~~ti~eNI~fg~~-~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqR 764 (1513)
.++||||+|++|++||+|||.++++ .+++++.++++.|++.++++.+|+|++|.|||+|.+||||||||
T Consensus 530 ~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQrQR 609 (694)
T TIGR03375 530 RQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQRQA 609 (694)
T ss_pred hhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHHHHH
Confidence 4699999999999999999999987 78899999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHh
Q 000432 765 IQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLK 844 (1513)
Q Consensus 765 i~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~ 844 (1513)
++||||++++|+|+|||||||+||+++++++.+ .+....+++|+|+||||+++++.||+|++|++|++++.|+|+|+++
T Consensus 610 lalARall~~p~iliLDE~Ts~LD~~te~~i~~-~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eLl~ 688 (694)
T TIGR03375 610 VALARALLRDPPILLLDEPTSAMDNRSEERFKD-RLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQVLE 688 (694)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHHHH
Confidence 999999999999999999999999999888865 5777778999999999999999999999999999999999999986
Q ss_pred c
Q 000432 845 Q 845 (1513)
Q Consensus 845 ~ 845 (1513)
+
T Consensus 689 ~ 689 (694)
T TIGR03375 689 A 689 (694)
T ss_pred H
Confidence 4
No 44
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=5.9e-70 Score=711.16 Aligned_cols=542 Identities=23% Similarity=0.330 Sum_probs=435.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 305 YKAIFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQLG 384 (1513)
Q Consensus 305 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 384 (1513)
++..++.+++.++...++.++..++.++.|++++.++|.+...... ...+.++++++++.++..++.....+...+++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (708)
T TIGR01193 147 FIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMM--GTLGIISIGLIIAYIIQQILSYIQIFLLNVLG 224 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344556777777788888999999999999999999977543221 22233444444555566666666666778899
Q ss_pred HHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 385 LRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFYSN--YMFMLPVQISLAIYILRTNLGLGSLAAL 462 (1513)
Q Consensus 385 ~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~--~~~~~pl~i~~~l~~L~~~lg~~~l~~l 462 (1513)
.++...++..+|+|.++++..++++.++|+++++++ |++.+.+++.... .+...+..++..+++++....+ +++.+
T Consensus 225 ~~~~~~l~~~~~~~ll~l~~~~f~~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l-~li~l 302 (708)
T TIGR01193 225 QRLSIDIILSYIKHLFELPMSFFSTRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLL-FLLSL 302 (708)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH-HHHHH
Confidence 999999999999999999999999999999999998 9999998765332 2223333333333333333322 33333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 463 AATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSA 542 (1513)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~ 542 (1513)
+++++.+.+...+.+..++..++.++..+++.+.+.|.++|+++||.+++|+.+.+++++..++..+...+.........
T Consensus 303 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (708)
T TIGR01193 303 LSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKADQGQQ 382 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444445556677888888889999999999999999999999999999999988887765544444333333322222
Q ss_pred HHH--HHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccc
Q 000432 543 FIF--WGSPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAV 620 (1513)
Q Consensus 543 ~~~--~~~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~ 620 (1513)
.+. ......+.++++|++.+..+.+|+|.++++..+...+..|+..+...+..+.+++++.+|+.++++.+++.+...
T Consensus 383 ~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~~ 462 (708)
T TIGR01193 383 AIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSEFINKK 462 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccc
Confidence 111 111223456778999999999999999999999999999999999999999999999999999998765432221
Q ss_pred cccCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe----
Q 000432 621 EYVPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT---- 696 (1513)
Q Consensus 621 ~~~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~---- 696 (1513)
...+.....+.|+++|++|+|++ ++++|+|+||+|++|+++||+|+||||||||+++|+|+++|++|+|.+||.
T Consensus 463 ~~~~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~~i~~ 540 (708)
T TIGR01193 463 KRTELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGFSLKD 540 (708)
T ss_pred cccCCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCEEHHH
Confidence 11111223457999999999963 358999999999999999999999999999999999999999999999984
Q ss_pred ---------EEEEcCCCcccCccHHHHHccCC--CCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHH
Q 000432 697 ---------KAYVPQSPWILTGNIRENILFGN--QYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRI 765 (1513)
Q Consensus 697 ---------~ayv~Q~~~l~~~ti~eNI~fg~--~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi 765 (1513)
++||||+|++|++||+|||.+|. ..++++..++++.+++.++++.+|+|++|.|||+|.+|||||||||
T Consensus 541 ~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQrQRi 620 (708)
T TIGR01193 541 IDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQKQRI 620 (708)
T ss_pred cCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHHHHHH
Confidence 69999999999999999999983 3577888999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000432 766 QIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 766 ~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
+||||++++|+|+|||||||+||+++++++.+. +.. ++++|+|+||||++.+..||+|++|++|++++.|+|+|+++.
T Consensus 621 alARall~~p~iliLDE~Ts~LD~~te~~i~~~-L~~-~~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L~~~ 698 (708)
T TIGR01193 621 ALARALLTDSKVLILDESTSNLDTITEKKIVNN-LLN-LQDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDELLDR 698 (708)
T ss_pred HHHHHHhhCCCEEEEeCccccCCHHHHHHHHHH-HHH-hcCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHHHhc
Confidence 999999999999999999999999998888764 454 478999999999999999999999999999999999999999
Q ss_pred CccHHHHHH
Q 000432 846 NIGFEVLVG 854 (1513)
Q Consensus 846 ~~~~~~l~~ 854 (1513)
++.|.++++
T Consensus 699 ~~~y~~l~~ 707 (708)
T TIGR01193 699 NGFYASLIH 707 (708)
T ss_pred CCcHHHHhh
Confidence 999988763
No 45
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=1.1e-68 Score=686.06 Aligned_cols=545 Identities=19% Similarity=0.235 Sum_probs=433.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 305 YKAIFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQLG 384 (1513)
Q Consensus 305 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 384 (1513)
++.+++.+++.++...+..++..++..+.|++++.++|.+..+.... ....+++.++++.++..++.....+...+++
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 93 (582)
T PRK11176 16 LWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKADRS--VLKWMPLVVIGLMILRGITSFISSYCISWVS 93 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33455566777777777777888888889999999998776432211 1122222233344445555555555667888
Q ss_pred HHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 385 LRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFY-SNYMFMLPVQISLAIYILRTNLGLGSLAALA 463 (1513)
Q Consensus 385 ~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~l~~L~~~lg~~~l~~l~ 463 (1513)
.++...++..+|+|.++++...+.+.++|++++++++|++++.+++.. +..++..++.+++.+++++..-++.+++.++
T Consensus 94 ~~~~~~lr~~~~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~ 173 (582)
T PRK11176 94 GKVVMTMRRRLFGHMMGMPVSFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSLILIV 173 (582)
T ss_pred HHHHHHHHHHHHHHHHcCCHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999987643 3344444444544444443332232333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 464 ATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSAF 543 (1513)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~~ 543 (1513)
++++...+.....+..++..++.++..++..+...|.++|+++||.+++|+.+.+++++..++-.+...+..........
T Consensus 174 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (582)
T PRK11176 174 IAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSASSISDP 253 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444556777778888888889999999999999999999999999998888877655444444333333322222
Q ss_pred HHH--HHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccc
Q 000432 544 IFW--GSPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAVE 621 (1513)
Q Consensus 544 ~~~--~~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~ 621 (1513)
+.. .....+.++.++++.+..+.+++|.+.++.+++..+..|+..+...+..+.+++.+++|+.++++.++.++....
T Consensus 254 ~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~ 333 (582)
T PRK11176 254 IIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQEKDEGKR 333 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCCc
Confidence 111 112334456677788888999999999999999999999999999999999999999999999986654322111
Q ss_pred ccCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-----
Q 000432 622 YVPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT----- 696 (1513)
Q Consensus 622 ~~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~----- 696 (1513)
. .......|+++|++|+|+++ ++++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 334 ~--~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g~~i~~~ 410 (582)
T PRK11176 334 V--IERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDGHDLRDY 410 (582)
T ss_pred C--CCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECCEEhhhc
Confidence 1 11223469999999999753 468999999999999999999999999999999999999999999999984
Q ss_pred --------EEEEcCCCcccCccHHHHHccCCC--CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHH
Q 000432 697 --------KAYVPQSPWILTGNIRENILFGNQ--YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQ 766 (1513)
Q Consensus 697 --------~ayv~Q~~~l~~~ti~eNI~fg~~--~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~ 766 (1513)
++||||+|++|++||+|||++|++ +++++++++++.+++.++++.+|+|++|.+||+|.+|||||||||+
T Consensus 411 ~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGGqrQRi~ 490 (582)
T PRK11176 411 TLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGGQRQRIA 490 (582)
T ss_pred CHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHHHHHHHH
Confidence 499999999999999999999864 6788999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcC
Q 000432 767 IARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQN 846 (1513)
Q Consensus 767 lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~ 846 (1513)
||||+|++|+|+||||||||||+++++.+++ .+....+++|+|+||||++.++.||+|++|++|++++.|+|+++++.+
T Consensus 491 LARall~~~~ililDEptsaLD~~t~~~i~~-~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~l~~~~ 569 (582)
T PRK11176 491 IARALLRDSPILILDEATSALDTESERAIQA-ALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAELLAQN 569 (582)
T ss_pred HHHHHHhCCCEEEEECccccCCHHHHHHHHH-HHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHHHHhCC
Confidence 9999999999999999999999999988875 566666789999999999999999999999999999999999999999
Q ss_pred ccHHHHHHh
Q 000432 847 IGFEVLVGA 855 (1513)
Q Consensus 847 ~~~~~l~~~ 855 (1513)
+.|++++..
T Consensus 570 ~~y~~l~~~ 578 (582)
T PRK11176 570 GVYAQLHKM 578 (582)
T ss_pred ChHHHHHHH
Confidence 999998764
No 46
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.6e-68 Score=680.88 Aligned_cols=541 Identities=19% Similarity=0.259 Sum_probs=422.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 307 AIFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQLGLR 386 (1513)
Q Consensus 307 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 386 (1513)
.+++.+++.++...++.++..++..+.|+++..++|.+.............+++++++..++..++.....+...+.+.+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (592)
T PRK10790 16 AYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLFNRAAVG 95 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677777888888999999999999999999977543222211112223334444445555666666677788999
Q ss_pred HHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 000432 387 LRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFYSNY-MFMLPVQISLAIYIL-RTNLGLGSLAALAA 464 (1513)
Q Consensus 387 ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~-~~~~pl~i~~~l~~L-~~~lg~~~l~~l~~ 464 (1513)
+...++..+|+|.++.+..++.+.++|+++|++++|++.+.+++..... +....+.+++++.++ +..+.+ .++.+++
T Consensus 96 ~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~li~l~~ 174 (592)
T PRK10790 96 VVQQLRTDVMDAALRQPLSAFDTQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWRM-ALVAIMI 174 (592)
T ss_pred HHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 9999999999999999999999999999999999999999987754332 222222222222222 222222 2222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Q 000432 465 TLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATS--- 541 (1513)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~--- 541 (1513)
+++.+.+.....+..++..++..+..++..+...|.++|+++||.|+.|+.+.+++.+..++..+...+........
T Consensus 175 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (592)
T PRK10790 175 FPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLRLDGFLLRP 254 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223334445566666677777778888889999999999999999999999998876654444322222222111
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccc
Q 000432 542 -AFIFWGSPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAV 620 (1513)
Q Consensus 542 -~~~~~~~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~ 620 (1513)
..++.....++ ++.++++ ...+.++.|.+++++.++..+..|+..++..+..+.++++|.+||.++++.++.+....
T Consensus 255 ~~~~~~~~~~~~-~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~ 332 (592)
T PRK10790 255 LLSLFSALILCG-LLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGPRQQYGND 332 (592)
T ss_pred HHHHHHHHHHHH-HHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccCCCC
Confidence 11111111111 2222233 46788999999999999999999999999999999999999999999998654322211
Q ss_pred cccCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe----
Q 000432 621 EYVPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT---- 696 (1513)
Q Consensus 621 ~~~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~---- 696 (1513)
. . ......|+++|++|+|++ ++++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.
T Consensus 333 ~-~--~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~idg~~i~~ 407 (592)
T PRK10790 333 D-R--PLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRLDGRPLSS 407 (592)
T ss_pred c-c--CCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEhhh
Confidence 1 1 112356999999999974 357999999999999999999999999999999999999999999999984
Q ss_pred ---------EEEEcCCCcccCccHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHH
Q 000432 697 ---------KAYVPQSPWILTGNIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQI 767 (1513)
Q Consensus 697 ---------~ayv~Q~~~l~~~ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~l 767 (1513)
++||||+|++|++||+|||.+|++.++++.+++++++++.++++.+|+|++|.+||+|.+|||||||||+|
T Consensus 408 ~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSGGqrQRial 487 (592)
T PRK10790 408 LSHSVLRQGVAMVQQDPVVLADTFLANVTLGRDISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSVGQKQLLAL 487 (592)
T ss_pred CCHHHHHhheEEEccCCccccchHHHHHHhCCCCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHHHHHHHHH
Confidence 69999999999999999999999888899999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcCc
Q 000432 768 ARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQNI 847 (1513)
Q Consensus 768 ARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~~ 847 (1513)
|||+|++|+|+|||||||+||+++++++.+ .++...+++|+|+||||++.++.||+|++|++|++++.|+|+|+++.++
T Consensus 488 ARaLl~~~~illlDEpts~LD~~t~~~i~~-~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~~L~~~~~ 566 (592)
T PRK10790 488 ARVLVQTPQILILDEATANIDSGTEQAIQQ-ALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQQLLAAQG 566 (592)
T ss_pred HHHHHhCCCEEEEeCCcccCCHHHHHHHHH-HHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 999999999999999999999999888864 5666667899999999999999999999999999999999999999999
Q ss_pred cHHHHHHhh
Q 000432 848 GFEVLVGAH 856 (1513)
Q Consensus 848 ~~~~l~~~~ 856 (1513)
.|.+++..+
T Consensus 567 ~y~~l~~~~ 575 (592)
T PRK10790 567 RYWQMYQLQ 575 (592)
T ss_pred HHHHHHHHH
Confidence 999998654
No 47
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=4.8e-68 Score=679.28 Aligned_cols=544 Identities=20% Similarity=0.256 Sum_probs=443.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 306 KAIFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQLGL 385 (1513)
Q Consensus 306 ~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 385 (1513)
+.+++.+++.+++..++.++..++....|++++.+++........ ...+.++++++++.++..++.....+...+.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 83 (571)
T TIGR02203 6 WSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRDR--SVLWWVPLVVIGLAVLRGICSFVSTYLLSWVSN 83 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667788888899999999999999999999999866543221 122223333444555555665556666788999
Q ss_pred HHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 386 RLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFY-SNYMFMLPVQISLAIYILRTNLGLGSLAALAA 464 (1513)
Q Consensus 386 ~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~l~~L~~~lg~~~l~~l~~ 464 (1513)
++...++..+|+|.++.+....++.+.|+++++++.|++++.+++.. +..++...+.+++++++++..-++.+++.+++
T Consensus 84 ~~~~~lr~~l~~~~~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~i~l~~ 163 (571)
T TIGR02203 84 KVVRDIRVRMFEKLLGLPVSFFDRQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTLIVVVM 163 (571)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999987753 33444444444444443333222223333344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 465 TLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSAFI 544 (1513)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~~~ 544 (1513)
+++.+.+.....+..++..++..+..+++.+.++|.++|+++||.++.|+.+.+++++..++..+...+..........+
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (571)
T TIGR02203 164 LPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGSISSPI 243 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445556677788888889999999999999999999999999999999998888877666655544444443333322
Q ss_pred HHHH--HHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc
Q 000432 545 FWGS--PTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAVEY 622 (1513)
Q Consensus 545 ~~~~--p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~ 622 (1513)
.... ...+.++.+|++.+..+.+|+|.++++..++..+..|+..+...+..+.+++++.+|+.++++.++..+....
T Consensus 244 ~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~- 322 (571)
T TIGR02203 244 TQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKDTGTR- 322 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC-
Confidence 2211 1234456778888889999999999999999999999999999999999999999999999986654332111
Q ss_pred cCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe------
Q 000432 623 VPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------ 696 (1513)
Q Consensus 623 ~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------ 696 (1513)
+.......|+++|++|+|++. ++++|+|+||+|++||+++|+|+||||||||+++|+|+++|.+|+|.++|.
T Consensus 323 -~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g~~i~~~~ 400 (571)
T TIGR02203 323 -AIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDGHDLADYT 400 (571)
T ss_pred -CCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEeHHhcC
Confidence 111233579999999999754 468999999999999999999999999999999999999999999999983
Q ss_pred -------EEEEcCCCcccCccHHHHHccCC--CCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHH
Q 000432 697 -------KAYVPQSPWILTGNIRENILFGN--QYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQI 767 (1513)
Q Consensus 697 -------~ayv~Q~~~l~~~ti~eNI~fg~--~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~l 767 (1513)
++||||+|++|++||||||.+++ +.++++.+++++.|++.++++.+|+|++|.|||+|.+|||||||||+|
T Consensus 401 ~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgGqrQRiaL 480 (571)
T TIGR02203 401 LASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGGQRQRLAI 480 (571)
T ss_pred HHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHHHHHHHHH
Confidence 69999999999999999999996 478899999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcCc
Q 000432 768 ARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQNI 847 (1513)
Q Consensus 768 ARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~~ 847 (1513)
|||+|++|+|++||||||+||+++++++.+ .+....++||+|+|||+.+.++.||+|++|++|++++.|+|+++++.++
T Consensus 481 ARall~~~~illLDEpts~LD~~~~~~i~~-~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~l~~~~~ 559 (571)
T TIGR02203 481 ARALLKDAPILILDEATSALDNESERLVQA-ALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNELLARNG 559 (571)
T ss_pred HHHHhcCCCEEEEeCccccCCHHHHHHHHH-HHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHHHHHcCC
Confidence 999999999999999999999999998865 5666678899999999999999999999999999999999999998888
Q ss_pred cHHHHHHh
Q 000432 848 GFEVLVGA 855 (1513)
Q Consensus 848 ~~~~l~~~ 855 (1513)
.|.+++..
T Consensus 560 ~~~~~~~~ 567 (571)
T TIGR02203 560 LYAQLHNM 567 (571)
T ss_pred HHHHHHHH
Confidence 88887653
No 48
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1.1e-68 Score=678.94 Aligned_cols=533 Identities=16% Similarity=0.105 Sum_probs=412.2
Q ss_pred HHHHHHHH-hhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 928 EVYWSYLT-AVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLVA 1006 (1513)
Q Consensus 928 ~~~~~y~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~ 1006 (1513)
+..++|++ +.++.. .+.+++.++..+..++.+++++...+.... ... ..+..++++.++..++.++..++..
T Consensus 6 ~~l~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (555)
T TIGR01194 6 GEILALLRSPFPAIT--AFSIALGLAGGLAIIALLASINNAIHEENF--LGQ---GSLFSFGGLCLLALLFRIGADIFPA 78 (555)
T ss_pred HHHHHHHhhccHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--ccc---hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555665 443332 233344445555666667777755443110 000 1122344455666778888999999
Q ss_pred HHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000432 1007 ITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVI 1086 (1513)
Q Consensus 1007 ~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv 1086 (1513)
..+.+...++|.++++++++.|++||++.++|++++|+++|++.++..+.. +..++..++.+++.++++++.+|.++++
T Consensus 79 ~~~~~~~~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~li 157 (555)
T TIGR01194 79 YAGMHIIANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVPMFAI 157 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 999999999999999999999999999999999999999999999998864 7777888888888999999999999887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHH--HHHHHHHHHHHhhchhHHHHHHHH
Q 000432 1087 FIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQED--RFTNANLSLIDNHSRPWFHNVSAM 1164 (1513)
Q Consensus 1087 ~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~--~f~~~~~~~~d~~~~~~~~~~~~~ 1164 (1513)
++.++++.+++..+..+..++..+......+.+.+++.|.+.|+++||+|+.++ ...+++.+..+...+.........
T Consensus 158 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (555)
T TIGR01194 158 TISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIF 237 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 666555555544444444455555556667889999999999999999999954 344555555554444333222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 000432 1165 EWLCFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAP 1244 (1513)
Q Consensus 1165 ~wl~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~ 1244 (1513)
.......+++..+...+..++. ...|.++.|.+..++.|...+..++..+...+.+++....|.+|+.++++.+.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~ 315 (555)
T TIGR01194 238 IAAENFGQLLFFLLIGCALFAA--AMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPE 315 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 2222222222222111111111 12367899999999999999999999999999999999999999999976432211
Q ss_pred Ccc--cC-CCC--CCCCCCCceEEEEEEEEEEcCC---CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCC
Q 000432 1245 LVT--EE-CRP--PSNWPDVGTISFHNLQIRYAEH---LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPT 1316 (1513)
Q Consensus 1245 ~~~--~~-~~~--~~~wp~~g~I~f~nvsf~Y~~~---~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~ 1316 (1513)
... ++ ... .+.....+.|+|+||+|+|++. .+++|+|+||+|++||++||||+||||||||+++|.|+++|+
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~ 395 (555)
T TIGR01194 316 PELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQ 395 (555)
T ss_pred ccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC
Confidence 110 00 000 0111234689999999999753 236999999999999999999999999999999999999999
Q ss_pred CcEEEEcCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCC
Q 000432 1317 MGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENG 1396 (1513)
Q Consensus 1317 ~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G 1396 (1513)
+|+|.+||+|+++++.+++|+++++|||||++|++|+|+|+.+ +.++++++++++.++++++++++|+||||.
T Consensus 396 ~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~~~--~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~----- 468 (555)
T TIGR01194 396 EGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDEGE--HASLDNAQQYLQRLEIADKVKIEDGGFSTT----- 468 (555)
T ss_pred CcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccccc--chhHHHHHHHHHHcCCchhhcccccccCCc-----
Confidence 9999999999999999999999999999999999999999754 678999999999999999999999999995
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHH-h-cCCcEEEEeccChhhHhhcCEEEEEeCCEE
Q 000432 1397 ENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQ-E-FKDRTVVTIAHRIHTVIDSDLVLVLSDGRI 1474 (1513)
Q Consensus 1397 ~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~-~-~~~~TvI~IAHRl~ti~~~DrIlVLd~G~I 1474 (1513)
.+||||||||++||||++++|+|||||||||+||++|++.|++.+.+ . .+++|+|+||||++++..||+|+||++|++
T Consensus 469 ~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i 548 (555)
T TIGR01194 469 TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCI 548 (555)
T ss_pred ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEE
Confidence 78999999999999999999999999999999999999999887643 3 368999999999999999999999999999
Q ss_pred eEe
Q 000432 1475 AEY 1477 (1513)
Q Consensus 1475 vE~ 1477 (1513)
+|.
T Consensus 549 ~~~ 551 (555)
T TIGR01194 549 VKD 551 (555)
T ss_pred EEe
Confidence 975
No 49
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=1.6e-67 Score=672.13 Aligned_cols=534 Identities=25% Similarity=0.345 Sum_probs=422.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 312 IRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQLGLRLRAAL 391 (1513)
Q Consensus 312 ~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L 391 (1513)
++ .+....++.++..++....|.++..+++.+... . .....+...+++..++..++.....+...+.+.++...+
T Consensus 13 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~l 87 (567)
T COG1132 13 YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLAD-L---GELLELLLLLLLLALLGGVLRALQSYLGSRLGQKIVADL 87 (567)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66 777888888899999999999999999987611 1 111222222223333444444445555666778999999
Q ss_pred HHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Q 000432 392 ISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFYSNYMFM-LPVQISLAIYILRTNLGL-GSLAALAATLTVM 469 (1513)
Q Consensus 392 ~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~-~pl~i~~~l~~L~~~lg~-~~l~~l~~~~~~~ 469 (1513)
+..+|+|.++++...++++++|++++++++|++.+.+.+........ .++.++..+++++ .+.| .+++.++..+++.
T Consensus 88 r~~~~~~l~~~~~~~~~~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~l~~~~~~~~~~ 166 (567)
T COG1132 88 RRDLFEKLLRLPLSFFDKAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLF-SLSWRLALILLLILPLLA 166 (567)
T ss_pred HHHHHHHHHhCCHHHhCcCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998876532222 2333333332222 2222 1222222223333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHH
Q 000432 470 TCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSAF--IFWG 547 (1513)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~~--~~~~ 547 (1513)
.....+.++.++...+..+..++..+.+.|.++|+++||.|+.|+...++.++..+...+...+.......... .+..
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (567)
T COG1132 167 LVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLEALLAPLMLLLS 246 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344555557777888888899999999999999999999999988777666544443332222222222211 1222
Q ss_pred HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCCC
Q 000432 548 SPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAVEYVPKGR 627 (1513)
Q Consensus 548 ~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~ 627 (1513)
....+.++.++.+.+..+.+++|.+.+++.++..+..|+..+...+..+.++..|.+|+.++++.++...+.... ...
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~~~~~~~--~~~ 324 (567)
T COG1132 247 SLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEVEDPPDP--LKD 324 (567)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCCCC--CCC
Confidence 233455566777778888899999999999999999999999999999999999999999999985532221111 112
Q ss_pred CcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-----------
Q 000432 628 SEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT----------- 696 (1513)
Q Consensus 628 ~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~----------- 696 (1513)
....|+++|++|+|++ ++++|+|+||++++||++|||||+|||||||+++|+|+++|++|+|.+||.
T Consensus 325 ~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg~dI~~i~~~~lr 402 (567)
T COG1132 325 TIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDGIDIRDISLDSLR 402 (567)
T ss_pred CCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCEehhhcCHHHHH
Confidence 3456999999999975 368999999999999999999999999999999999999999999999984
Q ss_pred --EEEEcCCCcccCccHHHHHccCCC-CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhc
Q 000432 697 --KAYVPQSPWILTGNIRENILFGNQ-YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQ 773 (1513)
Q Consensus 697 --~ayv~Q~~~l~~~ti~eNI~fg~~-~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~ 773 (1513)
++||||+|++|++||+|||.+|+| .++++..++++.+++++.++.+|+|++|.|||+|.+|||||||||+||||+++
T Consensus 403 ~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQrQrlaiARall~ 482 (567)
T COG1132 403 KRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQRQRLAIARALLR 482 (567)
T ss_pred HhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHHHHHHHHHHHHhc
Confidence 599999999999999999999998 47788999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHHHHH
Q 000432 774 DADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQNIGFEVLV 853 (1513)
Q Consensus 774 ~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~l~ 853 (1513)
||+|++||||||+||+++++.|.+ .+..+.++||+|+|+||++++.+||+|+||++|+|++.|+|+||+++++.|.+++
T Consensus 483 ~~~ILILDEaTSalD~~tE~~I~~-~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eLl~~~g~y~~l~ 561 (567)
T COG1132 483 NPPILILDEATSALDTETEALIQD-ALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEELLAKGGLYARLY 561 (567)
T ss_pred CCCEEEEeccccccCHHhHHHHHH-HHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHHHHcCCHHHHHH
Confidence 999999999999999999888864 5666678899999999999999999999999999999999999999999999998
Q ss_pred Hhh
Q 000432 854 GAH 856 (1513)
Q Consensus 854 ~~~ 856 (1513)
..+
T Consensus 562 ~~~ 564 (567)
T COG1132 562 QAQ 564 (567)
T ss_pred HHh
Confidence 754
No 50
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.3e-67 Score=669.57 Aligned_cols=541 Identities=22% Similarity=0.259 Sum_probs=421.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccCC--cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 308 IFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLT-DKKS--RSLESGYLLALAFLGAKMVETIAQRQWIFGARQLG 384 (1513)
Q Consensus 308 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~--~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~ 384 (1513)
+.+.+++.++++.++.++..++....|++++.++|... .+.. .. ...+..++++++..++..++.....+...+.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (574)
T PRK11160 10 LYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYS-FNYMLPAAGVRGAAIGRTAGRYGERLVSHDAT 88 (574)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhh-HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45667777888888999999999999999999999653 2211 01 11111222333344555566666666777899
Q ss_pred HHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Q 000432 385 LRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFY-SNYMFMLPVQISLAIYIL-RTNLGLGSLAAL 462 (1513)
Q Consensus 385 ~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~l~~L-~~~lg~~~l~~l 462 (1513)
.++...++..+|+|.++++..+++++++|++++++++|++++.+++.. +..+....+.++++++++ +..+.++.++.+
T Consensus 89 ~~~~~~lR~~l~~~l~~~~~~~~~~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~~~ 168 (574)
T PRK11160 89 FRVLTHLRVFTFSKLLPLSPAGLARYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTLALTLGG 168 (574)
T ss_pred HHHHHHHHHHHHHHhhccChHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998754 333333333333333322 222222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 463 AATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSA 542 (1513)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~ 542 (1513)
++.++...+...+.+..++..++.++..++..+.+.|.++|+++||.|+.|+.+.+++++..++..+...+.....+...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (574)
T PRK11160 169 ILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQANLTGLSQ 248 (574)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222234455666777778888888899999999999999999999999998888766555444444443333322
Q ss_pred HHHH--HHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc
Q 000432 543 FIFW--GSPTFISVVTFGACMLLGIQLTAGRVLSALATFRM-LQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDA 619 (1513)
Q Consensus 543 ~~~~--~~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~-L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~ 619 (1513)
.+.. .....+.++.+|++. ..+.+++|.+++++.+... ...|+..++..+..+.++++|.+||.++++.++..++.
T Consensus 249 ~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~~~~~~~ 327 (574)
T PRK11160 249 ALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQKPEVTFP 327 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 2211 112233345566666 4778999998888776544 45688889999999999999999999999876432211
Q ss_pred ccccCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe---
Q 000432 620 VEYVPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT--- 696 (1513)
Q Consensus 620 ~~~~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~--- 696 (1513)
....+ ......|+++|++|+|+++ ++++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.++|.
T Consensus 328 ~~~~~-~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~I~i~g~~i~ 405 (574)
T PRK11160 328 TTSTA-AADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGEILLNGQPIA 405 (574)
T ss_pred cccCC-CCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEhh
Confidence 11111 1223579999999999753 357999999999999999999999999999999999999999999999984
Q ss_pred ----------EEEEcCCCcccCccHHHHHccCCC-CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHH
Q 000432 697 ----------KAYVPQSPWILTGNIRENILFGNQ-YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRI 765 (1513)
Q Consensus 697 ----------~ayv~Q~~~l~~~ti~eNI~fg~~-~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi 765 (1513)
++||||+|++|++||+|||.+|++ .++++..++++.+++.++++. |+|++|.|||+|.+|||||||||
T Consensus 406 ~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~LSgGqrqRi 484 (574)
T PRK11160 406 DYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQLSGGEQRRL 484 (574)
T ss_pred hCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCCCCHHHHHHH
Confidence 599999999999999999999976 577888999999999999999 99999999999999999999999
Q ss_pred HHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000432 766 QIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 766 ~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
+||||++++|+|+|||||||+||+++++++.+ .+....+++|+|+||||++.++.||+|++|++|++++.|+|+|++++
T Consensus 485 alARall~~~~ililDE~ts~lD~~t~~~i~~-~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 563 (574)
T PRK11160 485 GIARALLHDAPLLLLDEPTEGLDAETERQILE-LLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQGTHQELLAQ 563 (574)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeCCHHHHHhc
Confidence 99999999999999999999999999888864 56666789999999999999999999999999999999999999999
Q ss_pred CccHHHHHH
Q 000432 846 NIGFEVLVG 854 (1513)
Q Consensus 846 ~~~~~~l~~ 854 (1513)
++.|+++++
T Consensus 564 ~g~y~~l~~ 572 (574)
T PRK11160 564 QGRYYQLKQ 572 (574)
T ss_pred CcHHHHHHh
Confidence 999998874
No 51
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=3.3e-67 Score=672.01 Aligned_cols=547 Identities=22% Similarity=0.279 Sum_probs=431.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 304 IYKAIFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQL 383 (1513)
Q Consensus 304 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 383 (1513)
.++.+++.+++.+.+..++.++..++..+.|++++.++|.+....+.. ....+++.++++.++..+......+...++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (576)
T TIGR02204 8 ALWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSG--LLNRYFAFLLVVALVLALGTAARFYLVTWL 85 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444556667777888888899999999999999999999744222211 111222223333334444555556667789
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q 000432 384 GLRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFY-SNYMFMLPVQISLAIYIL-RTNLGLGSLAA 461 (1513)
Q Consensus 384 ~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~l~~L-~~~lg~~~l~~ 461 (1513)
+.++...++..+|+|.++++...+++.+.|++++++++|++.+.+++.. +..++...+.++++++++ +....++.++.
T Consensus 86 ~~~~~~~lr~~l~~~l~~~~~~~~~~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l 165 (576)
T TIGR02204 86 GERVVADIRRAVFAHLISLSPSFFDKNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLTSLVL 165 (576)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 9999999999999999999999888899999999999999999987643 333333333333333322 23333322222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 462 LAATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATS 541 (1513)
Q Consensus 462 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~ 541 (1513)
+.+++.+.+...+.+..++..++.++..++..+.+.|.++|+++||.+++|+.+.+++++..++..+...+........
T Consensus 166 -~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (576)
T TIGR02204 166 -LAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTRALL 244 (576)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222233334456777788888888899999999999999999999999999988888776665444433333322222
Q ss_pred HHHH--HHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc
Q 000432 542 AFIF--WGSPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDA 619 (1513)
Q Consensus 542 ~~~~--~~~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~ 619 (1513)
.... ......+.++.+|++.+..+.+|+|.++++..++..+..|+..++..+..+.+++++++|+.++++.++..+..
T Consensus 245 ~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~ 324 (576)
T TIGR02204 245 TAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDIKAP 324 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcCCCC
Confidence 2211 11123445566788888889999999999999999999999999999999999999999999999865432111
Q ss_pred ccc-cCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC---
Q 000432 620 VEY-VPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG--- 695 (1513)
Q Consensus 620 ~~~-~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g--- 695 (1513)
... ....+....|+++|++|+|++++++++|+|+||+++|||+++|+|+||||||||+++|+|+++|.+|+|.++|
T Consensus 325 ~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~g~~i 404 (576)
T TIGR02204 325 AHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLDGVDL 404 (576)
T ss_pred CCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEECCEEH
Confidence 111 1111123469999999999754336899999999999999999999999999999999999999999999998
Q ss_pred ----------eEEEEcCCCcccCccHHHHHccCCC-CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHH
Q 000432 696 ----------TKAYVPQSPWILTGNIRENILFGNQ-YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQR 764 (1513)
Q Consensus 696 ----------~~ayv~Q~~~l~~~ti~eNI~fg~~-~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqR 764 (1513)
.++||||+|++|++||+|||.+|.| .++++.+++++.+++.++++.+|+|++|.+||+|.+||||||||
T Consensus 405 ~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgGq~Qr 484 (576)
T TIGR02204 405 RQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGGQRQR 484 (576)
T ss_pred HhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHHHHHH
Confidence 3699999999999999999999876 46678889999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHh
Q 000432 765 IQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLK 844 (1513)
Q Consensus 765 i~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~ 844 (1513)
++||||+|++|+|+|||||||+||+++++.+++ .+....+++|+|+||||++.++.||+|++|++|++++.|+++++++
T Consensus 485 l~laRal~~~~~ililDEpts~lD~~~~~~i~~-~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~l~~ 563 (576)
T TIGR02204 485 IAIARAILKDAPILLLDEATSALDAESEQLVQQ-ALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAELIA 563 (576)
T ss_pred HHHHHHHHhCCCeEEEeCcccccCHHHHHHHHH-HHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHHHHH
Confidence 999999999999999999999999999877764 5666678999999999999999999999999999999999999999
Q ss_pred cCccHHHHHH
Q 000432 845 QNIGFEVLVG 854 (1513)
Q Consensus 845 ~~~~~~~l~~ 854 (1513)
+++.|+++++
T Consensus 564 ~~~~~~~l~~ 573 (576)
T TIGR02204 564 KGGLYARLAR 573 (576)
T ss_pred cCChHHHHHh
Confidence 9999988764
No 52
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.2e-66 Score=678.18 Aligned_cols=546 Identities=21% Similarity=0.276 Sum_probs=439.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 304 IYKAIFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQL 383 (1513)
Q Consensus 304 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 383 (1513)
.++..++.+++.+....++.++..++.++.|++++.++|.+...... ...+.++++++++.++..++.....+...++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~--~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~~ 206 (694)
T TIGR01846 129 WFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRGL--STLSVLALAMLAVAIFEPALGGLRTYLFAHL 206 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44455566777788888888999999999999999999987533221 2233344445555556666666667777889
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 384 GLRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFY-SNYMFMLPVQISLAIYILRTNLGLGSLAAL 462 (1513)
Q Consensus 384 ~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~l~~L~~~lg~~~l~~l 462 (1513)
+.++...++..+|+|.++++..++++.++|++++++ +|++.+.+++.. ........+.+++.+++++..-++.+++.+
T Consensus 207 ~~~~~~~l~~~~~~~l~~l~~~~f~~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li~l 285 (694)
T TIGR01846 207 TSRIDVELGARLYRHLLGLPLGYFESRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTLTGVVI 285 (694)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHcCCCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999 699999987643 222222222222223333322222233333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 463 AATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSA 542 (1513)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~ 542 (1513)
+++++...+...+.+..++..++.++..+++.+.+.|.++|+++||.++.|+.+.+++++..++..+...+.........
T Consensus 286 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (694)
T TIGR01846 286 GSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNLGNIAG 365 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444445555667777777888888889999999999999999999999999998888766655555444444433332
Q ss_pred HHHH--HHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccc
Q 000432 543 FIFW--GSPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAV 620 (1513)
Q Consensus 543 ~~~~--~~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~ 620 (1513)
.... .....+.++.+|++.+..+.+|.|.++++..+...+..|+..+...+..+.+++++++|+.++++.++..+..
T Consensus 366 ~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e~~~~- 444 (694)
T TIGR01846 366 QAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTEPRSA- 444 (694)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCccCC-
Confidence 2221 1122344567888888899999999999999999999999999999999999999999999999876543221
Q ss_pred cccCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe----
Q 000432 621 EYVPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT---- 696 (1513)
Q Consensus 621 ~~~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~---- 696 (1513)
...+.......|+++|++|+|+++ ++++|+|+||+|++|+++||+|+||||||||+++|+|+++|++|+|.+||.
T Consensus 445 ~~~~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg~~i~~ 523 (694)
T TIGR01846 445 GLAALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDGVDLAI 523 (694)
T ss_pred CCCCCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEehhh
Confidence 111111234579999999999753 457999999999999999999999999999999999999999999999984
Q ss_pred ---------EEEEcCCCcccCccHHHHHccCCC-CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHH
Q 000432 697 ---------KAYVPQSPWILTGNIRENILFGNQ-YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQ 766 (1513)
Q Consensus 697 ---------~ayv~Q~~~l~~~ti~eNI~fg~~-~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~ 766 (1513)
++||||+|++|++||+|||.++++ .++++..++++.+++.++++.+|+|++|.+||+|.+||||||||++
T Consensus 524 ~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq~qri~ 603 (694)
T TIGR01846 524 ADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQRQRIA 603 (694)
T ss_pred CCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHHHHHHH
Confidence 599999999999999999999875 5677888999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcC
Q 000432 767 IARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQN 846 (1513)
Q Consensus 767 lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~ 846 (1513)
||||++++|+|+|||||||+||+++++++.+ .+....+++|+|+||||++.++.||+|++|++|++++.|+|+|+++++
T Consensus 604 lARall~~~~ililDEpts~LD~~~~~~i~~-~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l~~~~ 682 (694)
T TIGR01846 604 IARALVGNPRILIFDEATSALDYESEALIMR-NMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEELLALQ 682 (694)
T ss_pred HHHHHHhCCCEEEEECCCcCCCHHHHHHHHH-HHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHHHHcC
Confidence 9999999999999999999999999888865 566666889999999999999999999999999999999999999999
Q ss_pred ccHHHHHHh
Q 000432 847 IGFEVLVGA 855 (1513)
Q Consensus 847 ~~~~~l~~~ 855 (1513)
+.|+++++.
T Consensus 683 ~~y~~l~~~ 691 (694)
T TIGR01846 683 GLYARLWQQ 691 (694)
T ss_pred ChHHHHHHh
Confidence 999998753
No 53
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=5.5e-67 Score=662.57 Aligned_cols=505 Identities=19% Similarity=0.221 Sum_probs=389.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 307 AIFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQLGLR 386 (1513)
Q Consensus 307 ~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 386 (1513)
.+++.+++.++...++.++..++..+.|++++.++|.+..... . ...+.+.+++++..++..++.....+...+.+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (529)
T TIGR02868 6 PLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP-V-LYLSVAAVAVRAFGIGRAVFRYLERLVGHDAALR 83 (529)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-h-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455667777788888899999999999999999997653321 1 1111111122223344445555555566788889
Q ss_pred HHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 387 LRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFYS-NYMFMLPVQISLAIYILRTNLGLGSLAALAAT 465 (1513)
Q Consensus 387 ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~-~~~~~~pl~i~~~l~~L~~~lg~~~l~~l~~~ 465 (1513)
+...++..+|+|.++++..+++++++|+++|++++|++++.+++... ..+....+.+++++++++..-+..+++.++.+
T Consensus 84 ~~~~lr~~~~~~ll~~~~~~~~~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~~l~~~ 163 (529)
T TIGR02868 84 SLGRLRVRVYDRLARLALAGRRRFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALVLAAGL 163 (529)
T ss_pred HHHHHHHHHHHHhhccCccccccCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999877543 23333333333333332221111222222222
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 466 LTVMTCN-IPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSAFI 544 (1513)
Q Consensus 466 ~~~~~~~-~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~~~ 544 (1513)
++++++. ....+..++..++..+..++..+.+.|.++|+++||.|++|+.+.+++++..++..+...+.....+....+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (529)
T TIGR02868 164 LLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATGLGAAA 243 (529)
T ss_pred HHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222222 233344455566677788899999999999999999999999999999887766555555544444433332
Q ss_pred HHHH--HHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc
Q 000432 545 FWGS--PTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAVEY 622 (1513)
Q Consensus 545 ~~~~--p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~ 622 (1513)
.... ...+.++.+|++.+.++.+|.|.+.+++.+...+..|+..++..+..+.++++|.+|+.++++.++..++....
T Consensus 244 ~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~~ 323 (529)
T TIGR02868 244 QLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRPEGVVP 323 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcCCCCCC
Confidence 2222 22344556778888889999999999999999999999999999999999999999999999876532211110
Q ss_pred --cCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC-----
Q 000432 623 --VPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG----- 695 (1513)
Q Consensus 623 --~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g----- 695 (1513)
.+.......|+++|++|+|+++ +++|+|+||+|++||++|||||||||||||+++|+|+++|++|+|.+||
T Consensus 324 ~~~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g~~i~~ 401 (529)
T TIGR02868 324 AAGALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDGVSVSS 401 (529)
T ss_pred CCcccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEhhh
Confidence 0011123469999999999753 4799999999999999999999999999999999999999999999999
Q ss_pred -------eEEEEcCCCcccCccHHHHHccCCC-CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHH
Q 000432 696 -------TKAYVPQSPWILTGNIRENILFGNQ-YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQI 767 (1513)
Q Consensus 696 -------~~ayv~Q~~~l~~~ti~eNI~fg~~-~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~l 767 (1513)
.++||||+|++|++||||||++|+| .++++++++++.|++.++++.+|+|++|.|||+|.+|||||||||+|
T Consensus 402 ~~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQrQRiai 481 (529)
T TIGR02868 402 LQDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGERQRLAL 481 (529)
T ss_pred HHHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHHHHHHHH
Confidence 6899999999999999999999976 57889999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCC
Q 000432 768 ARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQV 816 (1513)
Q Consensus 768 ARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~ 816 (1513)
|||++++|+|+||||||||||+++++.|.+. +....+++|+|+||||+
T Consensus 482 ARall~~~~iliLDE~TSaLD~~te~~I~~~-l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 482 ARALLADAPILLLDEPTEHLDAGTESELLED-LLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHhcCCCEEEEEecCC
Confidence 9999999999999999999999999888754 56667899999999995
No 54
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=2.1e-66 Score=664.55 Aligned_cols=541 Identities=21% Similarity=0.260 Sum_probs=420.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 308 IFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQLGLRL 387 (1513)
Q Consensus 308 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 387 (1513)
+++.+++.+.+.+++.++..++.++.|++++.++|.+..+. . .. .+++.+++..++..+......+...++..++
T Consensus 13 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~--~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (588)
T PRK13657 13 YLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGKG--D--IF-PLLAAWAGFGLFNIIAGVLVARHADRLAHRR 87 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc--c--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556677777888889999999999999999999876432 1 11 1111122222222333333344566788888
Q ss_pred HHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 388 RAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFY-SNYMFMLPVQISLAIYILRTNLGLGSLAALAATL 466 (1513)
Q Consensus 388 r~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~l~~L~~~lg~~~l~~l~~~~ 466 (1513)
+..+...+|+|.++++...+.+.++|+++++++.|++.+.+.+.. +.......+..++.+++++..-.+.+++.+++++
T Consensus 88 ~~~l~~~l~~~l~~~~~~~~~~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~ 167 (588)
T PRK13657 88 RLAVLTEYFERIIQLPLAWHSQRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLVLVVLGI 167 (588)
T ss_pred HHHHHHHHHHHHHhCCHHHHCcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999765432 2222222222222222222211112222333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Q 000432 467 TVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSAFI-- 544 (1513)
Q Consensus 467 ~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~~~-- 544 (1513)
+...+...+.+..++.+++.++..++..+...|.++|+++||.|+.|+.+.+++.+.-++..+...+..........+
T Consensus 168 l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (588)
T PRK13657 168 VYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWALASVLNR 247 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344455667777888888888999999999999999999999999999888777665444333322222222211111
Q ss_pred HHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccC
Q 000432 545 FWGSPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAVEYVP 624 (1513)
Q Consensus 545 ~~~~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~ 624 (1513)
.......+.++.++++.+..+.+|+|.+++++.++..+..|+..+...+..+.+++.+.+|+.++++.++..+......+
T Consensus 248 ~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 327 (588)
T PRK13657 248 AASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRDPPGAID 327 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCCCCC
Confidence 11222345566788888889999999999999999999999999999999999999999999999976543221111111
Q ss_pred CCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC---------
Q 000432 625 KGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG--------- 695 (1513)
Q Consensus 625 ~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g--------- 695 (1513)
.......|+++|++|+|++ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|.+|+|.++|
T Consensus 328 ~~~~~~~I~~~~vsf~y~~--~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~~~~~~ 405 (588)
T PRK13657 328 LGRVKGAVEFDDVSFSYDN--SRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIRTVTRA 405 (588)
T ss_pred cCCCCCeEEEEEEEEEeCC--CCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhhhCCHH
Confidence 1122347999999999974 25799999999999999999999999999999999999999999999998
Q ss_pred ----eEEEEcCCCcccCccHHHHHccCCC-CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHH
Q 000432 696 ----TKAYVPQSPWILTGNIRENILFGNQ-YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARA 770 (1513)
Q Consensus 696 ----~~ayv~Q~~~l~~~ti~eNI~fg~~-~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARa 770 (1513)
.++||||+|++|++||||||++++| .++++.+++++.+++.+.++.+|+|++|.+||+|.+|||||||||+||||
T Consensus 406 ~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRialARa 485 (588)
T PRK13657 406 SLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRLAIARA 485 (588)
T ss_pred HHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHHHHHHH
Confidence 4699999999999999999999975 56778889999999999999999999999999999999999999999999
Q ss_pred HhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHH
Q 000432 771 VYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQNIGFE 850 (1513)
Q Consensus 771 l~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~ 850 (1513)
++++|+|+|||||||+||+++++.+++ .+....+++|+|+||||++.++.||+|++|++|++++.|+|+++++.++.|.
T Consensus 486 ll~~~~iliLDEpts~LD~~t~~~i~~-~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~~~~y~ 564 (588)
T PRK13657 486 LLKDPPILILDEATSALDVETEAKVKA-ALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVARGGRFA 564 (588)
T ss_pred HhcCCCEEEEeCCccCCCHHHHHHHHH-HHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHCCChHH
Confidence 999999999999999999999988875 4555667899999999999999999999999999999999999999999999
Q ss_pred HHHHhh
Q 000432 851 VLVGAH 856 (1513)
Q Consensus 851 ~l~~~~ 856 (1513)
++++..
T Consensus 565 ~l~~~~ 570 (588)
T PRK13657 565 ALLRAQ 570 (588)
T ss_pred HHHHHh
Confidence 988643
No 55
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.5e-66 Score=619.17 Aligned_cols=529 Identities=24% Similarity=0.311 Sum_probs=432.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 318 INASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQLGLRLRAALISHLYR 397 (1513)
Q Consensus 318 ~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~ 397 (1513)
+..++.++..++...+-+++...++.+-..+. . ...+.++++++++.+++.++....-...++.+.++|..|+..+++
T Consensus 4 i~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~-~-~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~ 81 (559)
T COG4988 4 ISALLAVLSGIAIIAQAALLADILTKLIEGQL-F-QSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLD 81 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777777777777887777776654432 1 334556667777788888888777778889999999999999999
Q ss_pred HHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 398 KGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIF-YS---NYMFMLPVQISLAIYILRTNLGLGSLAALAATLTVMTCNI 473 (1513)
Q Consensus 398 K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~-~~---~~~~~~pl~i~~~l~~L~~~lg~~~l~~l~~~~~~~~~~~ 473 (1513)
|..++++.+-+..++|++.++++.-++.+..++. |+ ......|+.+.++++.+.+.-++..+..+..+++. .+
T Consensus 82 ~l~~~gp~~~~~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlf---Mi 158 (559)
T COG4988 82 KLAKLGPAFIAQKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLF---MI 158 (559)
T ss_pred HHHhCChhhhcCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH---HH
Confidence 9999999999999999999999999999988764 22 33445677777777666665555444444433333 34
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 474 PITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLE----SLRQVECIWLWKSLRLSATSAFIFWGSP 549 (1513)
Q Consensus 474 ~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~----~~R~~E~~~~~~~~~~~~~~~~~~~~~p 549 (1513)
.+++..++..++.++....-....-+.|+|+.++|.|+..+...++|. +.|+.-++.++-.....++.-++...+.
T Consensus 159 lvg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsi 238 (559)
T COG4988 159 LVGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSI 238 (559)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777777778888888888889999999999999998877776664 4566666666655444444444433332
Q ss_pred HHHHHHHHHHHHHhc-ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccc-cCCCC
Q 000432 550 TFISVVTFGACMLLG-IQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAVEY-VPKGR 627 (1513)
Q Consensus 550 ~~v~~~~f~~~~~~~-~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~-~~~~~ 627 (1513)
..+..+.+..+++ |+++....+.++.+---+..|++.+...++.-+++..+.+++..|++.|....+..+. .....
T Consensus 239 --AlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~ 316 (559)
T COG4988 239 --ALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANE 316 (559)
T ss_pred --HHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccC
Confidence 2233344445566 6999999999999999999999999999999999999999999999988764443321 11222
Q ss_pred CcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC------------
Q 000432 628 SEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG------------ 695 (1513)
Q Consensus 628 ~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g------------ 695 (1513)
....++.+|++|.|+++ +++++|+||++++|+++||||+||||||||+++|+|+++|++|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~~g--~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~ 394 (559)
T COG4988 317 PPIEISLENLSFRYPDG--KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWR 394 (559)
T ss_pred CCceeeecceEEecCCC--CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHH
Confidence 34456667999999753 3899999999999999999999999999999999999999999999998
Q ss_pred -eEEEEcCCCcccCccHHHHHccCCC-CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhc
Q 000432 696 -TKAYVPQSPWILTGNIRENILFGNQ-YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQ 773 (1513)
Q Consensus 696 -~~ayv~Q~~~l~~~ti~eNI~fg~~-~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~ 773 (1513)
+++||||+|.||+|||||||+|+++ .+++...++++..++.+.++. |+|.||+|||+|.+|||||+|||+||||+++
T Consensus 395 k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~ 473 (559)
T COG4988 395 KQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLS 473 (559)
T ss_pred hHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcC
Confidence 3699999999999999999999998 457889999999999999998 9999999999999999999999999999999
Q ss_pred CCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHHHHH
Q 000432 774 DADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQNIGFEVLV 853 (1513)
Q Consensus 774 ~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~l~ 853 (1513)
++++||||||||+||+++++.| .+.+..+.++||+|+||||++.+..||+|+||++|+++++|+|+++.++++.|++++
T Consensus 474 ~~~l~llDEpTA~LD~etE~~i-~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~~~~y~~l~ 552 (559)
T COG4988 474 PASLLLLDEPTAHLDAETEQII-LQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEKQGLYANLL 552 (559)
T ss_pred CCCEEEecCCccCCCHhHHHHH-HHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhcCcHHHHHH
Confidence 9999999999999999997766 467888889999999999999999999999999999999999999999999999998
Q ss_pred Hhhh
Q 000432 854 GAHS 857 (1513)
Q Consensus 854 ~~~~ 857 (1513)
..+.
T Consensus 553 ~~q~ 556 (559)
T COG4988 553 KQQE 556 (559)
T ss_pred HHHh
Confidence 7543
No 56
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.4e-66 Score=662.30 Aligned_cols=529 Identities=23% Similarity=0.288 Sum_probs=417.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 000432 323 AVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQLGLRLRAALISHLYRKGLHL 402 (1513)
Q Consensus 323 ~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L~l 402 (1513)
.++..++..+.|++++.++|.+....... ...+.++++++++.++..++.....+...+.+.++...++..+|+|.+++
T Consensus 4 ~~~~~~~~~~~p~~~~~iid~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~ 82 (569)
T PRK10789 4 LIIIAMLQLIPPKVVGIIVDGVTEQHMTT-GQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQ 82 (569)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhccCCcch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 45556677889999999999775432111 12233344444444555555555555667788999999999999999999
Q ss_pred CcccccCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 403 SSQSRQSHTSGEIINYMSVDVQRISDFIFY-SNYMFMLPVQISLAIYILRTNLGL-GSLAALAATLTVMTCNIPITRIQK 480 (1513)
Q Consensus 403 ~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~l~~L~~~lg~-~~l~~l~~~~~~~~~~~~~~~~~~ 480 (1513)
+..++.++++|++++++++|++.+...... +..++..++..++++++++..++| .+++.++++++.+.+...+.+..+
T Consensus 83 ~~~~~~~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~ 162 (569)
T PRK10789 83 HPEFYLRHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLH 162 (569)
T ss_pred CHHHHcCCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999866532 344444444444443333223333 223333333444444555667777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHH
Q 000432 481 RFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSAFIFW--GSPTFISVVTFG 558 (1513)
Q Consensus 481 ~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~~~~~--~~p~~v~~~~f~ 558 (1513)
+..++.++..++..+.+.|.++|+++||.+++|+.+.+++.+..++..+...+.....+....+.. .....+.++.+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g 242 (569)
T PRK10789 163 ERFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGG 242 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777778888889999999999999999999998888876554433333333333322222111 111234455678
Q ss_pred HHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCCCCcceEEEEeEE
Q 000432 559 ACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAVEYVPKGRSEFEVEVVNGK 638 (1513)
Q Consensus 559 ~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~I~~~~~s 638 (1513)
++.+.++.+|+|.+++++.++..+..|+..+++.+..+.+++++.+|+.++++.++..+...... ......|+++|++
T Consensus 243 ~~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~~~~--~~~~~~I~~~~v~ 320 (569)
T PRK10789 243 SWMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGSEPV--PEGRGELDVNIRQ 320 (569)
T ss_pred HHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCCCC--CCCCCcEEEEEEE
Confidence 88888999999999999999999999999999999999999999999999998754322111111 1223469999999
Q ss_pred EEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------EEEEcCCCc
Q 000432 639 FSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------KAYVPQSPW 705 (1513)
Q Consensus 639 f~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~ayv~Q~~~ 705 (1513)
|+|+.+ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++||||+|+
T Consensus 321 ~~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~ 399 (569)
T PRK10789 321 FTYPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPF 399 (569)
T ss_pred EECCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCe
Confidence 999753 458999999999999999999999999999999999999999999999984 599999999
Q ss_pred ccCccHHHHHccCCC-CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCEEEeeCcC
Q 000432 706 ILTGNIRENILFGNQ-YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLLDDPF 784 (1513)
Q Consensus 706 l~~~ti~eNI~fg~~-~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~illLDep~ 784 (1513)
+|++|++|||.+|.+ .++++++++++.+++.+++..+|+|++|.+||+|.+||||||||++||||++++|+|+||||||
T Consensus 400 lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpt 479 (569)
T PRK10789 400 LFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDAL 479 (569)
T ss_pred eccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECcc
Confidence 999999999999964 5778889999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHHHHHHhh
Q 000432 785 SAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQNIGFEVLVGAH 856 (1513)
Q Consensus 785 salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~l~~~~ 856 (1513)
|+||+++++++.+ .++...+++|+|+||||++.++.||+|++|++|++++.|++++++++++.|.++++.+
T Consensus 480 s~LD~~~~~~i~~-~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y~~l~~~~ 550 (569)
T PRK10789 480 SAVDGRTEHQILH-NLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQSGWYRDMYRYQ 550 (569)
T ss_pred ccCCHHHHHHHHH-HHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHcCChHHHHHHHh
Confidence 9999999988875 4666668999999999999999999999999999999999999999999999988654
No 57
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=3.4e-68 Score=637.05 Aligned_cols=468 Identities=28% Similarity=0.410 Sum_probs=357.9
Q ss_pred eEEEEeEEEEeCCCCC-CCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCC----CcEEEECCe---------
Q 000432 631 EVEVVNGKFSWNPESS-SPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKM----AGTVKISGT--------- 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~-~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~----~G~i~~~g~--------- 696 (1513)
-++++|.+.+|..... .++++||||++.+||.+||||+|||||||+.++|+|..++. +|+|.++|+
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 5889999988875532 25999999999999999999999999999999999999987 899998873
Q ss_pred --------EEEEcCCCc-ccCc--cHHHHHc----cCCCCC-chHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChH
Q 000432 697 --------KAYVPQSPW-ILTG--NIRENIL----FGNQYD-SCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGG 760 (1513)
Q Consensus 697 --------~ayv~Q~~~-l~~~--ti~eNI~----fg~~~~-~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGG 760 (1513)
+||++|+|+ .+|. ||.+-|. ...+.+ ++..+++++.. +- -.+|+.... ..-...||||
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL---~~-Vgl~~~~~~--~~yPheLSGG 158 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELL---EQ-VGLPDPERR--DRYPHQLSGG 158 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHH---HH-cCCCChhhh--ccCCcccCch
Confidence 599999984 3443 6655553 333222 22222222221 11 123333222 4457899999
Q ss_pred HHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEec
Q 000432 761 QKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAG 837 (1513)
Q Consensus 761 QkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g 837 (1513)
||||+.||+|+..+|+++|+||||+|||+.+..+|.+ +++.+. .|.++|+|||++..+.+ ||+|+||++|+++|.|
T Consensus 159 ~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~-llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G 237 (539)
T COG1123 159 MRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILD-LLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVETG 237 (539)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHH-HHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEec
Confidence 9999999999999999999999999999999999975 566554 48899999999999876 9999999999999999
Q ss_pred ChHHHHhcCccHHHHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhhhcCCCchhh
Q 000432 838 RFEELLKQNIGFEVLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITEKGGKLVQE 917 (1513)
Q Consensus 838 ~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 917 (1513)
+.++++++... .
T Consensus 238 ~~~~i~~~p~h--------p------------------------------------------------------------ 249 (539)
T COG1123 238 PTEEILSNPQH--------P------------------------------------------------------------ 249 (539)
T ss_pred CHHHHHhccCC--------c------------------------------------------------------------
Confidence 99998753210 0
Q ss_pred hHhhhcccchHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHH
Q 000432 918 EEREKGSIGKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLC 997 (1513)
Q Consensus 918 e~~~~g~v~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~ 997 (1513)
|-+. ++. ..+.... ....
T Consensus 250 ---------------YT~~-----Ll~----------------------a~p~~~~-~~~~------------------- 267 (539)
T COG1123 250 ---------------YTRG-----LLA----------------------AVPRLGD-EKII------------------- 267 (539)
T ss_pred ---------------ccHH-----HHh----------------------hCCCccc-cccc-------------------
Confidence 0000 000 0000000 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 998 VLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMS 1077 (1513)
Q Consensus 998 ~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~ 1077 (1513)
T Consensus 268 -------------------------------------------------------------------------------- 267 (539)
T COG1123 268 -------------------------------------------------------------------------------- 267 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhH
Q 000432 1078 QVAWQVFVIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPW 1157 (1513)
Q Consensus 1078 ~~~~~l~lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~ 1157 (1513)
T Consensus 268 -------------------------------------------------------------------------------- 267 (539)
T COG1123 268 -------------------------------------------------------------------------------- 267 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 000432 1158 FHNVSAMEWLCFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYS 1237 (1513)
Q Consensus 1158 ~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~ 1237 (1513)
T Consensus 268 -------------------------------------------------------------------------------- 267 (539)
T COG1123 268 -------------------------------------------------------------------------------- 267 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCcccCCCCCCCCCCCceEEEEEEEEEEcC---------CCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHH
Q 000432 1238 NLPSEAPLVTEECRPPSNWPDVGTISFHNLQIRYAE---------HLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQA 1308 (1513)
Q Consensus 1238 ~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~---------~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~l 1308 (1513)
..+.+. +. +...-++++|++.+|.. +...+++||||++++||++||||.||||||||.++
T Consensus 268 ~~~~~~--------~~---~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~ 336 (539)
T COG1123 268 RLPRRG--------PL---RAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARI 336 (539)
T ss_pred cccccc--------cc---ccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHH
Confidence 000000 00 01225889999999974 12468999999999999999999999999999999
Q ss_pred HhccCCCCCcEEEEcCee--CCCCChHHhhhceEEEcCCCcc--c-cCcHhhccC-CCC---CC----CHHHHHHHHHHc
Q 000432 1309 IFRIVEPTMGSIIIDNVD--ITKIGLHDLRSRLGIIPQDPTL--F-DGTVRGNLD-PLV---QY----SDKQVWEALDKC 1375 (1513)
Q Consensus 1309 L~rl~ep~~G~I~IDGvd--I~~i~l~~LR~~isiVpQdp~L--F-~gTIR~NLd-p~~---~~----sdeei~~aL~~~ 1375 (1513)
|+|+++|++|+|.+||.| .+.-....+|+++-+|+|||+- - ..||+++|. |.. .. ..+.+-+.++++
T Consensus 337 i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~V 416 (539)
T COG1123 337 LAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELV 416 (539)
T ss_pred HhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHc
Confidence 999999999999999977 3433456688899999999973 2 469999984 332 11 223577889999
Q ss_pred CCcH-HHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEE
Q 000432 1376 QLGD-LVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVT 1452 (1513)
Q Consensus 1376 ~l~~-~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~ 1452 (1513)
+|.+ +..+.| ..||||||||+||||||..+|++||+|||||+||+-+.+.|.+.|++.-+ +.|.|+
T Consensus 417 gL~~~~l~ryP-----------~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lf 485 (539)
T COG1123 417 GLPPEFLDRYP-----------HELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLF 485 (539)
T ss_pred CCCHHHHhcCc-----------hhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 9985 444444 46899999999999999999999999999999999999999999876543 689999
Q ss_pred eccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCChHHHHHHHH
Q 000432 1453 IAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIKE 1497 (1513)
Q Consensus 1453 IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~~ 1497 (1513)
|+|+++.++. ||||+||++|+|||.|+.++..+++...|.+..-+
T Consensus 486 ISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~p~h~Ytr~L~~ 531 (539)
T COG1123 486 ISHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFENPQHPYTRKLLA 531 (539)
T ss_pred EeCCHHHHHhhCceEEEEECCeEEEeCCHHHHhcCCCChHHHHHHH
Confidence 9999999998 99999999999999999999999887777765543
No 58
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=6.2e-65 Score=648.02 Aligned_cols=540 Identities=18% Similarity=0.246 Sum_probs=421.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 308 IFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQLGLRL 387 (1513)
Q Consensus 308 l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~i 387 (1513)
+++.+|+.++...++.++..++..+.|++++.++|.+..+... ..+++.+++..++..+......+...++..++
T Consensus 13 ~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (585)
T TIGR01192 13 YLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSDV-----LPTLALWAGFGVFNTIAYVLVAREADRLAHGR 87 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566778888888899999999999999999999977543211 11111112223334444444555667888899
Q ss_pred HHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 000432 388 RAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFY-SNYMFMLPVQISLAIYIL-RTNLGLGSLAALAAT 465 (1513)
Q Consensus 388 r~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~l~~L-~~~lg~~~l~~l~~~ 465 (1513)
+..++..+|+|.++++...++++++|++++++++|++.+.+++.. +.......+.++++++++ +..+.++ ++.++++
T Consensus 88 ~~~lr~~~~~~l~~l~~~~~~~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~-li~l~~~ 166 (585)
T TIGR01192 88 RATLLTEAFGRIISMPLSWHQQRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLS-IVLMVLG 166 (585)
T ss_pred HHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 999999999999999999999999999999999999999876643 222333333333332222 2222222 2222333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000432 466 LTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSAFI- 544 (1513)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~~~- 544 (1513)
++...+...+.++.++..++..+..++..+.+.|.++|+++||.++.|+.+.+++++..++-.+...+..........+
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (585)
T TIGR01192 167 ILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWALASGLN 246 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444556677777777888888889999999999999999999999888887765543333222222222222111
Q ss_pred -HHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccc
Q 000432 545 -FWGSPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAVEYV 623 (1513)
Q Consensus 545 -~~~~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~ 623 (1513)
.......+.++.+|++.+..+.++.|.+++++.++..+..|+..+...+..+.+++++.+|+.++++.++..++.....
T Consensus 247 ~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~~~~ 326 (585)
T TIGR01192 247 RMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREEPADAP 326 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCccCC
Confidence 1111223455677888888999999999999999999999999999999999999999999999997654322111111
Q ss_pred CCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------
Q 000432 624 PKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------- 696 (1513)
Q Consensus 624 ~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------- 696 (1513)
+.......++++|++|+|+++ +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 327 ~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~~~ 404 (585)
T TIGR01192 327 ELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDINTVTR 404 (585)
T ss_pred CCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhhhCCH
Confidence 111123469999999999742 46899999999999999999999999999999999999999999999883
Q ss_pred ------EEEEcCCCcccCccHHHHHccCCC-CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHH
Q 000432 697 ------KAYVPQSPWILTGNIRENILFGNQ-YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIAR 769 (1513)
Q Consensus 697 ------~ayv~Q~~~l~~~ti~eNI~fg~~-~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lAR 769 (1513)
++||||+|++|++|++|||.++.+ .++++.+++++.+++.+.+..+|+|++|.+||+|.+|||||||||+|||
T Consensus 405 ~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl~lAR 484 (585)
T TIGR01192 405 ESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRLAIAR 484 (585)
T ss_pred HHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHHHHHH
Confidence 599999999999999999999965 4566777888888899999999999999999999999999999999999
Q ss_pred HHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcCccH
Q 000432 770 AVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQNIGF 849 (1513)
Q Consensus 770 al~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~ 849 (1513)
|++++|+++|||||||+||+++++.+. +.+....+++|+|+||||++.++.||+|++|++|++++.|++++++++++.|
T Consensus 485 all~~p~ililDEpts~LD~~~~~~i~-~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~~~~y 563 (585)
T TIGR01192 485 AILKNAPILVLDEATSALDVETEARVK-NAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQKDGRF 563 (585)
T ss_pred HHhcCCCEEEEECCccCCCHHHHHHHH-HHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHCCChH
Confidence 999999999999999999999988885 4566667799999999999999999999999999999999999999999999
Q ss_pred HHHHHhh
Q 000432 850 EVLVGAH 856 (1513)
Q Consensus 850 ~~l~~~~ 856 (1513)
.+++..+
T Consensus 564 ~~l~~~~ 570 (585)
T TIGR01192 564 YKLLRRS 570 (585)
T ss_pred HHHHHhC
Confidence 9888643
No 59
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.1e-65 Score=647.51 Aligned_cols=521 Identities=20% Similarity=0.233 Sum_probs=412.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 311 FIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQLGLRLRAA 390 (1513)
Q Consensus 311 ~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~ 390 (1513)
.+++.++...++.++..++..+.|++++.++|.+...... ...+.++++++++.++..++.....+...+++.++...
T Consensus 3 ~~k~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (544)
T TIGR01842 3 KNKSTFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGSV--PTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGA 80 (544)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCch--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566677788888999999999999999999976532221 22333444555556666677777777788899999999
Q ss_pred HHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 391 LISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFY--SNYMFMLPVQISLAIYILRTNLGLGSLAALAATLTV 468 (1513)
Q Consensus 391 L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~--~~~~~~~pl~i~~~l~~L~~~lg~~~l~~l~~~~~~ 468 (1513)
++..+|+|.++++.. ..+...+.+++|++++.+++.. ...+...++.++..+++++....++. +.++.+++.
T Consensus 81 lr~~~~~~ll~~~~~-----~~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l-i~l~~~~l~ 154 (544)
T TIGR01842 81 LNQPIFAASFSATLR-----RGKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIYLLVCFLLHPWIGI-LALGGAVVL 154 (544)
T ss_pred HHHHHHHHHhcCccc-----CccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhHHHH-HHHHHHHHH
Confidence 999999999999873 2355678889999999987643 22333333333333222222222222 222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Q 000432 469 MTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSAFIFW-- 546 (1513)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~~~~~-- 546 (1513)
+.+.....+..++..++.++..+++.+.+.|.++|+++||.|++|+.+.+++++..++..+...+.....+....+..
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (544)
T TIGR01842 155 VGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYF 234 (544)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333445566777777888999999999999999999999999999999999887766655554444443333222221
Q ss_pred HHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCC
Q 000432 547 GSPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAVEYVPKG 626 (1513)
Q Consensus 547 ~~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~ 626 (1513)
.....+.++++|++.+..+.+|+|.+++++.++..+..|+..++..+..+.+++++.+|+.++++.++..++... . .
T Consensus 235 ~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~~~-~--~ 311 (544)
T TIGR01842 235 RIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPAMP-L--P 311 (544)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCC-C--C
Confidence 112234556788888889999999999999999999999999999999999999999999999976654322111 1 1
Q ss_pred CCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe----------
Q 000432 627 RSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT---------- 696 (1513)
Q Consensus 627 ~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~---------- 696 (1513)
.....|+++|++|+|+++ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 312 ~~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~ 390 (544)
T TIGR01842 312 EPEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETF 390 (544)
T ss_pred CCCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHH
Confidence 223579999999999743 358999999999999999999999999999999999999999999999983
Q ss_pred ---EEEEcCCCcccCccHHHHHccCCC-CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHh
Q 000432 697 ---KAYVPQSPWILTGNIRENILFGNQ-YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVY 772 (1513)
Q Consensus 697 ---~ayv~Q~~~l~~~ti~eNI~fg~~-~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~ 772 (1513)
++||||+|++|++|++|||.++.+ .+++++.++++.+++.++++.+|+|++|.+||+|.+||||||||++||||++
T Consensus 391 ~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall 470 (544)
T TIGR01842 391 GKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALY 470 (544)
T ss_pred hhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHh
Confidence 699999999999999999997654 6778888999999999999999999999999999999999999999999999
Q ss_pred cCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHh
Q 000432 773 QDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLK 844 (1513)
Q Consensus 773 ~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~ 844 (1513)
++|+++|||||||+||+++++.+.+ .+.... +++|+|+||||++.+..||+|++|++|++++.|+++|+++
T Consensus 471 ~~~~ililDEpts~LD~~~~~~i~~-~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 471 GDPKLVVLDEPNSNLDEEGEQALAN-AIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred cCCCEEEEeCCccccCHHHHHHHHH-HHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 9999999999999999999888865 565553 6899999999999998999999999999999999999865
No 60
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=5.1e-66 Score=711.78 Aligned_cols=531 Identities=19% Similarity=0.212 Sum_probs=402.1
Q ss_pred HHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCC
Q 000432 949 AQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAP 1028 (1513)
Q Consensus 949 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p 1028 (1513)
+.++..+++...|+.++...+.....+.......++.++++..++..++.....+.....+.+....++..+++++++.|
T Consensus 309 ~~i~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i~~k~l~l~ 388 (1495)
T PLN03232 309 FKIGHDLSQFVGPVILSHLLQSMQEGDPAWVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAIFHKSLRLT 388 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34566666777777776554432111111111111111111122222222222223357788888889999999999999
Q ss_pred cccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1029 MAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVIFIPVTGICIWYQQYYIPTAREL 1108 (1513)
Q Consensus 1029 ~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~~~r~l 1108 (1513)
..+|++.++|+++||+++|++.++... ..+..+....+.++..++++...-....++.++++++++.+..++.+..++.
T Consensus 389 ~~~~~~~~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l~~~lg~~~l~~~~v~~l~~pl~~~~~~~~~~~ 467 (1495)
T PLN03232 389 HEARKNFASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLLYQQLGVASLFGSLILFLLIPLQTLIVRKMRKL 467 (1495)
T ss_pred hhhcCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999875 4555555555555544444332111111112222222223344455555666
Q ss_pred HHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1109 ARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLVVLVT 1188 (1513)
Q Consensus 1109 ~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~ 1188 (1513)
++.....++...+.+.|.++|+++||+|++|+.|.+++.+..+...+..........+..........+ +.+..+....
T Consensus 468 ~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~fg~~~ 546 (1495)
T PLN03232 468 TKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNSIPVV-VTLVSFGVFV 546 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 666667777889999999999999999999999999988877776665544443333332222111111 1111122222
Q ss_pred hcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCceEEEEEEE
Q 000432 1189 LPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLVTEECRPPSNWPDVGTISFHNLQ 1268 (1513)
Q Consensus 1189 ~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs 1268 (1513)
+..|.+++|.+..++++...+..++..+...+..+.+..+|.+|+.++++.+++.+.. .++ ..+..+.|+|+|++
T Consensus 547 v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~----~~~-~~~~~~~I~~~~vs 621 (1495)
T PLN03232 547 LLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQ----NPP-LQPGAPAISIKNGY 621 (1495)
T ss_pred HhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccc----cCC-cCCCCCcEEEEeeE
Confidence 3477899999999999999999999999999999999999999999999866542211 111 11234579999999
Q ss_pred EEEcCC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCc
Q 000432 1269 IRYAEH-LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPT 1347 (1513)
Q Consensus 1269 f~Y~~~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~ 1347 (1513)
|+|+++ .+++|+|+||+|++||+++|||+||||||||+++|+|+++|++|.+. .+|++|+||||+|+
T Consensus 622 F~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~------------~~~~~Iayv~Q~p~ 689 (1495)
T PLN03232 622 FSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV------------VIRGSVAYVPQVSW 689 (1495)
T ss_pred EEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE------------EecCcEEEEcCccc
Confidence 999753 35799999999999999999999999999999999999999999773 46889999999999
Q ss_pred cccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCC
Q 000432 1348 LFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATA 1427 (1513)
Q Consensus 1348 LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTS 1427 (1513)
||+|||||||.++.++++++++++++.|+++++++.+|+|+||.|||+|.|||||||||||||||++++|+|++||||||
T Consensus 690 Lf~gTIreNI~fg~~~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~~~~IlLLDEptS 769 (1495)
T PLN03232 690 IFNATVRENILFGSDFESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYSNSDIYIFDDPLS 769 (1495)
T ss_pred cccccHHHHhhcCCccCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999999999888899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHH-HHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHHHHHHHh
Q 000432 1428 SVDSATDGVIQ-KIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIKEYS 1499 (1513)
Q Consensus 1428 slD~~Te~~Iq-~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~~~~ 1499 (1513)
+||++|++.|. +.++...+++|+|+||||++++..||+|++|++|+|+|.|+|+||+++ ++.|+++++++.
T Consensus 770 aLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~-~~~~~~l~~~~~ 841 (1495)
T PLN03232 770 ALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKS-GSLFKKLMENAG 841 (1495)
T ss_pred ccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhc-chhHHHHHHhcc
Confidence 99999999874 557777789999999999999999999999999999999999999986 789999987654
No 61
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.1e-65 Score=707.71 Aligned_cols=474 Identities=20% Similarity=0.246 Sum_probs=384.5
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000432 1005 VAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVF 1084 (1513)
Q Consensus 1005 ~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~ 1084 (1513)
....+.+....++..++++++++|..++++.++|+++|++++|++.++... ..+..+....+.++..++++...-.+..
T Consensus 365 ~~~~~~~ir~~L~~~i~~k~L~l~~~~~~~~~~G~ivnl~s~Dv~~i~~~~-~~l~~l~~~pl~ii~~~~lL~~~lg~~~ 443 (1622)
T PLN03130 365 VMRVGFRLRSTLVAAVFRKSLRLTHEGRKKFTSGKITNLMTTDAEALQQIC-QQLHTLWSAPFRIIIAMVLLYQQLGVAS 443 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCChhhcCCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 347788888889999999999999999999999999999999999999987 3455566666666655554443222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHH
Q 000432 1085 VIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAM 1164 (1513)
Q Consensus 1085 lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~ 1164 (1513)
++.++++++++.++.++.+..+..++.....+....+.+.|.++|+++||+|++|+.|.++..+..+...+.........
T Consensus 444 l~g~~v~~l~~~l~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~ 523 (1622)
T PLN03130 444 LIGSLMLVLMFPIQTFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLS 523 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223333444444555555666666666777888999999999999999999999999998887777655443333332
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 000432 1165 EWLCFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAP 1244 (1513)
Q Consensus 1165 ~wl~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~ 1244 (1513)
.+.......... ++.+..+....+..|.+++|.+..++++...+..++..+...+..+....+|.+|+.++++.+++.+
T Consensus 524 ~~~~~~~~~~~~-~v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~ 602 (1622)
T PLN03130 524 AFNSFILNSIPV-LVTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVL 602 (1622)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccc
Confidence 222222121111 1111122222334788999999999999999999999999999999999999999999997654321
Q ss_pred CcccCCCCCCCCCCCceEEEEEEEEEEcCC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCC-cEEEE
Q 000432 1245 LVTEECRPPSNWPDVGTISFHNLQIRYAEH-LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTM-GSIII 1322 (1513)
Q Consensus 1245 ~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~-G~I~I 1322 (1513)
.. . ++ .-+..+.|+|+|++|+|+++ .+++|+|+||+|++||++||||+||||||||+++|+|+++|++ |+|.
T Consensus 603 ~~--~--~~-~~~~~~~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~- 676 (1622)
T PLN03130 603 LP--N--PP-LEPGLPAISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVV- 676 (1622)
T ss_pred cc--C--Cc-ccCCCCceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEE-
Confidence 10 1 11 01224579999999999753 3569999999999999999999999999999999999999999 9997
Q ss_pred cCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChh
Q 000432 1323 DNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVG 1402 (1513)
Q Consensus 1323 DGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgG 1402 (1513)
+|++|+||||+|+||+|||||||.++.+++++++++|++.|+|+++++.+|+|+||.|||+|.|||||
T Consensus 677 ------------l~~~Iayv~Q~p~LfngTIreNI~fg~~~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGG 744 (1622)
T PLN03130 677 ------------IRGTVAYVPQVSWIFNATVRDNILFGSPFDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGG 744 (1622)
T ss_pred ------------EcCeEEEEcCccccCCCCHHHHHhCCCcccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHH
Confidence 47799999999999999999999988889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHH-HHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChh
Q 000432 1403 QRQLFCLGRTLLKKSSILVLDEATASVDSATDGVI-QKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPT 1481 (1513)
Q Consensus 1403 QRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~I-q~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~ 1481 (1513)
|||||+||||++++|+|+|||||||+||+++++.| ++.++...+++|+|+||||++.+..||+|++|++|+|+|.|+|+
T Consensus 745 QKQRIaLARAly~~~~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~ 824 (1622)
T PLN03130 745 QKQRVSMARAVYSNSDVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYE 824 (1622)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHH
Confidence 99999999999999999999999999999999877 56787777899999999999999999999999999999999999
Q ss_pred HHHhcCChHHHHHHHHHh
Q 000432 1482 KLLEREDSFFSQLIKEYS 1499 (1513)
Q Consensus 1482 eLl~~~~~~f~~l~~~~~ 1499 (1513)
||+++ ++.|+++++.+.
T Consensus 825 eL~~~-~~~~~~l~~~~~ 841 (1622)
T PLN03130 825 ELSNN-GPLFQKLMENAG 841 (1622)
T ss_pred HHHhc-chhHHHHHHhcc
Confidence 99986 788999987654
No 62
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-67 Score=669.55 Aligned_cols=484 Identities=23% Similarity=0.338 Sum_probs=356.7
Q ss_pred eEEEEeEEEEeCCCC-CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC--------------
Q 000432 631 EVEVVNGKFSWNPES-SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG-------------- 695 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g-------------- 695 (1513)
-++++|++++|.... ..++|+||||++++||+++|+|+||||||||+++|+|+++|.+|+|.++|
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 589999999996322 34799999999999999999999999999999999999999999998765
Q ss_pred -------------eEEEEcCCC--cccC-ccHHHHHccCCC----CCchH----HHHHHHHHhcHHHHhhccCCCCcccc
Q 000432 696 -------------TKAYVPQSP--WILT-GNIRENILFGNQ----YDSCK----YDRTVEACALVKDFELFASGDLTEIG 751 (1513)
Q Consensus 696 -------------~~ayv~Q~~--~l~~-~ti~eNI~fg~~----~~~~~----~~~v~~~~~l~~d~~~l~~Gd~T~Ig 751 (1513)
.++||+|+| .++. .||+|||.++.. .+... ..++++..++ ++. .....
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL-------~~~-~~~~~ 163 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRI-------PEA-QTILS 163 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCC-------CCh-hhHHh
Confidence 379999998 4554 599999987532 22211 1122222222 110 12234
Q ss_pred CCCCCCChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-C-CcEEEEEccCCCcccc-CCEEEEE
Q 000432 752 ERGINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-K-DKSVLYVTHQVEFLPA-ADIILVM 828 (1513)
Q Consensus 752 e~g~~LSGGQkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~-~~TvilvtH~~~~l~~-~d~i~vl 828 (1513)
....+|||||||||+||||++.+|++|||||||++||+.+.+.+.+ .++.+. + |+|+|+|||+++.+.. ||+|++|
T Consensus 164 ~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~-ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl 242 (623)
T PRK10261 164 RYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQ-LIKVLQKEMSMGVIFITHDMGVVAEIADRVLVM 242 (623)
T ss_pred CCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHH-HHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEe
Confidence 5667899999999999999999999999999999999999887764 566553 3 7999999999998765 9999999
Q ss_pred eCCeEEEecChHHHHhcCc-cHH-HHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhh
Q 000432 829 ENGRIAQAGRFEELLKQNI-GFE-VLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLE 906 (1513)
Q Consensus 829 ~~G~i~~~g~~~~l~~~~~-~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (1513)
++|++++.|+++++..... .|. .+.. .
T Consensus 243 ~~G~i~~~g~~~~~~~~~~~~~~~~l~~---------------------------------------------------~ 271 (623)
T PRK10261 243 YQGEAVETGSVEQIFHAPQHPYTRALLA---------------------------------------------------A 271 (623)
T ss_pred eCCeecccCCHHHhhcCCCChhhhhhhh---------------------------------------------------c
Confidence 9999999999887753210 000 0000 0
Q ss_pred hhhcCCCchhhhHhhhcccchHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHH
Q 000432 907 ITEKGGKLVQEEEREKGSIGKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLV 986 (1513)
Q Consensus 907 ~~~~~~~~~~~e~~~~g~v~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~v 986 (1513)
.+ .. . + ..|. .. +.
T Consensus 272 --~~--~~-~-~--~~~~---------------------------------------------~~----~~--------- 285 (623)
T PRK10261 272 --VP--QL-G-A--MKGL---------------------------------------------DY----PR--------- 285 (623)
T ss_pred --cC--cc-c-c--cccc---------------------------------------------cC----Cc---------
Confidence 00 00 0 0 0000 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHH
Q 000432 987 YTLLTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSI 1066 (1513)
Q Consensus 987 y~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~ 1066 (1513)
+.|. . +
T Consensus 286 ---------------------------------------~~~~-----~-----------~------------------- 291 (623)
T PRK10261 286 ---------------------------------------RFPL-----I-----------S------------------- 291 (623)
T ss_pred ---------------------------------------cccc-----c-----------c-------------------
Confidence 0000 0 0
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHH
Q 000432 1067 IQILGTIGVMSQVAWQVFVIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNAN 1146 (1513)
Q Consensus 1067 ~~~~~~l~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~ 1146 (1513)
T Consensus 292 -------------------------------------------------------------------------------- 291 (623)
T PRK10261 292 -------------------------------------------------------------------------------- 291 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1147 LSLIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENK 1226 (1513)
Q Consensus 1147 ~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~ 1226 (1513)
. .. ...
T Consensus 292 -----~-~~----------------------------------~~~---------------------------------- 297 (623)
T PRK10261 292 -----L-EH----------------------------------PAK---------------------------------- 297 (623)
T ss_pred -----c-cc----------------------------------ccc----------------------------------
Confidence 0 00 000
Q ss_pred HHHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCceEEEEEEEEEEcCC---------CCcceeeeeEEeeCCcEEEEEcC
Q 000432 1227 MISVERILQYSNLPSEAPLVTEECRPPSNWPDVGTISFHNLQIRYAEH---------LPSVLKNISCTFPGRKKVGVVGR 1297 (1513)
Q Consensus 1227 ~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~---------~~~vLk~is~~I~~GekvgIVGr 1297 (1513)
..+.+.+ . . .+ +....++++||+++|+.. ...+|+||||+|++||++||||+
T Consensus 298 -----------~~~~~~~---~-~-~~---~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~~vs~~i~~Ge~~~lvG~ 358 (623)
T PRK10261 298 -----------QEPPIEQ---D-T-VV---DGEPILQVRNLVTRFPLRSGLLNRVTREVHAVEKVSFDLWPGETLSLVGE 358 (623)
T ss_pred -----------cCccccc---c-c-cc---CCCceEEEeeeEEEEcCCCccccccCCceEEEeeeEeEEcCCCEEEEECC
Confidence 0000000 0 0 00 011259999999999621 13599999999999999999999
Q ss_pred CCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChH---HhhhceEEEcCCCc--ccc-CcHhhccCC-C---CCCC---
Q 000432 1298 TGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLH---DLRSRLGIIPQDPT--LFD-GTVRGNLDP-L---VQYS--- 1364 (1513)
Q Consensus 1298 TGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~---~LR~~isiVpQdp~--LF~-gTIR~NLdp-~---~~~s--- 1364 (1513)
||||||||+++|.|+.+|++|+|.+||.++...+.. .+|++|+||||+|. ++. -||++|+.. . +..+
T Consensus 359 nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~~~l~~~~~~~~~~~~~~ 438 (623)
T PRK10261 359 SGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVGDSIMEPLRVHGLLPGKA 438 (623)
T ss_pred CCCCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHHHHHHHHHHHcCCCCHHH
Confidence 999999999999999999999999999999877643 46788999999983 665 599999852 1 1111
Q ss_pred -HHHHHHHHHHcCCc-HHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHH
Q 000432 1365 -DKQVWEALDKCQLG-DLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIIS 1442 (1513)
Q Consensus 1365 -deei~~aL~~~~l~-~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~ 1442 (1513)
++++.++|+.+++. +...+. ...||||||||++|||||+.+|+||||||||++||..+.+.|.+.|+
T Consensus 439 ~~~~~~~~L~~~gL~~~~~~~~-----------~~~LSgGqrQRv~iAraL~~~p~llllDEPts~LD~~~~~~i~~ll~ 507 (623)
T PRK10261 439 AAARVAWLLERVGLLPEHAWRY-----------PHEFSGGQRQRICIARALALNPKVIIADEAVSALDVSIRGQIINLLL 507 (623)
T ss_pred HHHHHHHHHHHcCCCHHHhhCC-----------cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHH
Confidence 24567788888885 333222 24699999999999999999999999999999999999999999998
Q ss_pred HhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCChHH-HHHHHHH
Q 000432 1443 QEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLEREDSFF-SQLIKEY 1498 (1513)
Q Consensus 1443 ~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f-~~l~~~~ 1498 (1513)
+..+ +.|||+|+|+++.+.. ||||+||++|+|+|.|+++++..++...| +.++...
T Consensus 508 ~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~p~~~~~~~l~~~~ 567 (623)
T PRK10261 508 DLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFENPQHPYTRKLMAAV 567 (623)
T ss_pred HHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcCCCCHHHHHHHhhC
Confidence 7643 7899999999999977 99999999999999999999987655544 4465543
No 63
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=1.5e-64 Score=640.35 Aligned_cols=507 Identities=22% Similarity=0.237 Sum_probs=397.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-ccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 313 RKKAAINASFAVINAATSYVGPYLINDFVNFLT-DKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQLGLRLRAAL 391 (1513)
Q Consensus 313 ~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~-~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L 391 (1513)
|+.+...+++.++..++..+.|++++.++|.+. ..... ...+.+++.+++..++..++.....+...+++.++...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 79 (529)
T TIGR02857 2 RRALALLGLLGALGALLIIAQAWLLARVIDGLISAGEPL--AELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQL 79 (529)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555677888889999999999999999999874 32211 222333444445555666666666777788999999999
Q ss_pred HHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH
Q 000432 392 ISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFY-SNYMFMLPVQISLAIYILR---TNLGLGSLAALAATLT 467 (1513)
Q Consensus 392 ~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~l~~L~---~~lg~~~l~~l~~~~~ 467 (1513)
+..+|+|.++++...++++++|+++|++++|++++.+++.. +..++...+.+++++++++ +.+++..++ .+++
T Consensus 80 r~~l~~~l~~~~~~~~~~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~---~~~l 156 (529)
T TIGR02857 80 RERLLAAVAALGPGWLQGRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLL---TAPL 156 (529)
T ss_pred HHHHHHHHHhCCchhhccCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH---HHHH
Confidence 99999999999999999999999999999999999987653 3444443333333333222 223332222 2222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 468 VMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSAFIFWG 547 (1513)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~~~~~~ 547 (1513)
...+.....++.++..++.++..+++.+.+.|.++|+++||.|++|+.+.+++++..++..+...+..........+...
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (529)
T TIGR02857 157 IPIFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLEL 236 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22223445666777777888889999999999999999999999999998888765544333333322222222222111
Q ss_pred HH--HHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCC
Q 000432 548 SP--TFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAVEYVPK 625 (1513)
Q Consensus 548 ~p--~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~ 625 (1513)
.. ..+.++.++++.+..+.+|.|.+++++.+...+..|+..+...+..+.+++++.+|+.++++.++.+.+... .+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~~-~~- 314 (529)
T TIGR02857 237 FATLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKAP-VT- 314 (529)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCcC-CC-
Confidence 11 112223455566668899999999999999999999999999999999999999999999975432221111 11
Q ss_pred CCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe---------
Q 000432 626 GRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT--------- 696 (1513)
Q Consensus 626 ~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~--------- 696 (1513)
......|+++|++|+|++. ++++|+|+||+|++|++++|+|++|||||||+++|+|+++|++|+|.++|.
T Consensus 315 ~~~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~ 393 (529)
T TIGR02857 315 AAPAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADS 393 (529)
T ss_pred CCCCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHH
Confidence 1123479999999999753 358999999999999999999999999999999999999999999999984
Q ss_pred ----EEEEcCCCcccCccHHHHHccCCC-CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHH
Q 000432 697 ----KAYVPQSPWILTGNIRENILFGNQ-YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAV 771 (1513)
Q Consensus 697 ----~ayv~Q~~~l~~~ti~eNI~fg~~-~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal 771 (1513)
++||||+|++|++||+|||.+|.+ .++++.+++++.+++.++++.+|+|++|.+||+|.+||||||||++||||+
T Consensus 394 lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal 473 (529)
T TIGR02857 394 WRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAF 473 (529)
T ss_pred HHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHH
Confidence 699999999999999999999875 567889999999999999999999999999999999999999999999999
Q ss_pred hcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEE
Q 000432 772 YQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVM 828 (1513)
Q Consensus 772 ~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl 828 (1513)
+++|+|+|||||||+||+++++.+++ .+....+++|+|+||||++.++.||+|++|
T Consensus 474 ~~~~~ililDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 474 LRDAPLLLLDEPTAHLDAETEALVTE-ALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred hcCCCEEEEeCcccccCHHHHHHHHH-HHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 99999999999999999999998875 566666899999999999999999999986
No 64
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.7e-67 Score=592.06 Aligned_cols=533 Identities=21% Similarity=0.273 Sum_probs=404.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 319 NASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKM--VETIAQRQWIFGARQLGLRLRAALISHLY 396 (1513)
Q Consensus 319 ~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~--~~~~~~~~~~~~~~~~~~~ir~~L~~~iy 396 (1513)
..++.++.-++....|.+.+.+++.+..+..+..+..+.++++.++-.. ...+......|..-++..--..++-..+|
T Consensus 220 cl~ll~i~rli~~~~pi~~k~iv~~ltap~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~lf 299 (790)
T KOG0056|consen 220 CLFLLIIGRLINVSLPILSKWIVDELTAPDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETELF 299 (790)
T ss_pred HHHHHHHHHHHhhhhHHhHHHHHHhhcCcchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHHHH
Confidence 3444555566677789999999998874433331222333332222111 11223333333333444445566778899
Q ss_pred HHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Q 000432 397 RKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFYS-NYMFMLPVQISLAIYILRTNLG-LGSLAALAATLTVMTCNIP 474 (1513)
Q Consensus 397 ~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~-~~~~~~pl~i~~~l~~L~~~lg-~~~l~~l~~~~~~~~~~~~ 474 (1513)
+|...+|..++-.+.+||++..|....+.+. +..++ ..+.-..+.++++++..+.... |-.++.+..+.+...+.+.
T Consensus 300 rHlh~LSlrwHL~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~ 378 (790)
T KOG0056|consen 300 RHLHNLSLRWHLNRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLYCYVTIK 378 (790)
T ss_pred HHHHhhceeeeecccccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHHhheeee
Confidence 9999999999888999999999987777666 44333 2222333445555444333322 2233333444444444555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 475 ITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLES----LRQVECIWLWKSLRLSATSAFIFWGSPT 550 (1513)
Q Consensus 475 ~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~----~R~~E~~~~~~~~~~~~~~~~~~~~~p~ 550 (1513)
+.....++++++..+-.+--+.-.+.+-|.+++|.|+.|+...++..+ ..+.|.+.+.....++.....++. ..
T Consensus 379 iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~Ii~--lg 456 (790)
T KOG0056|consen 379 ITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGIIG--LG 456 (790)
T ss_pred eehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh--hH
Confidence 666667777776555555555667899999999999999876655444 444444443333333322222211 12
Q ss_pred HHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCCCCcc
Q 000432 551 FISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAVEYVPKGRSEF 630 (1513)
Q Consensus 551 ~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~ 630 (1513)
++....+.+|.+..+.+|.|...-+..|+.+|..|++.+...+..++...+-++|+.+.++++++..+.....|-....+
T Consensus 457 ll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P~a~pl~~~~G 536 (790)
T KOG0056|consen 457 LLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLPGAPPLKVTQG 536 (790)
T ss_pred HhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCCCCCCccccCC
Confidence 33334455666677889999999999999999999999999999999999999999999987665444333333334567
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------E
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------K 697 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~ 697 (1513)
.|+|+|++|+|++ .+|+|+||||+++||+.+|+|||+|+||||++++|.++++..+|+|.+||+ +
T Consensus 537 ~i~fsnvtF~Y~p--~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLRs~I 614 (790)
T KOG0056|consen 537 KIEFSNVTFAYDP--GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLRSSI 614 (790)
T ss_pred eEEEEEeEEecCC--CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHHHhc
Confidence 8999999999986 479999999999999999999999999999999999999999999999994 5
Q ss_pred EEEcCCCcccCccHHHHHccCCCC-CchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCC
Q 000432 698 AYVPQSPWILTGNIRENILFGNQY-DSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDAD 776 (1513)
Q Consensus 698 ayv~Q~~~l~~~ti~eNI~fg~~~-~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~ 776 (1513)
|.|||+..+||+||..||.+|+|- ..|+..++.+|+..++-+-.+|+|+.|.|||||..||||+|||||+||+++++|.
T Consensus 615 GVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK~P~ 694 (790)
T KOG0056|consen 615 GVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILKAPS 694 (790)
T ss_pred CcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhcCCc
Confidence 999999999999999999999985 3456667788999999999999999999999999999999999999999999999
Q ss_pred EEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhc-CccHHHHHHh
Q 000432 777 IYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQ-NIGFEVLVGA 855 (1513)
Q Consensus 777 illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~-~~~~~~l~~~ 855 (1513)
|++|||+|||||.+|++.| +.++.++.+++|.|+|+||++++-+||.|+|++||+|+|.|+|+||+++ +|.|+++++.
T Consensus 695 iIlLDEATSALDT~tER~I-QaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rdgG~Ya~MWq~ 773 (790)
T KOG0056|consen 695 IILLDEATSALDTNTERAI-QAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRDGGAYADMWQA 773 (790)
T ss_pred EEEEcchhhhcCCccHHHH-HHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhccCCcHHHHHHH
Confidence 9999999999999999888 7889988999999999999999999999999999999999999999987 8899999976
Q ss_pred hh
Q 000432 856 HS 857 (1513)
Q Consensus 856 ~~ 857 (1513)
++
T Consensus 774 qq 775 (790)
T KOG0056|consen 774 QQ 775 (790)
T ss_pred HH
Confidence 54
No 65
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.5e-65 Score=699.82 Aligned_cols=249 Identities=22% Similarity=0.288 Sum_probs=202.9
Q ss_pred HHHHHHHHHHHHHHHHhc--CCCCCCCCcccCCCCCCCCCCCc--eEEEEEEEEEEc--CCCCcceeeeeEEeeCCcEEE
Q 000432 1220 ICNAENKMISVERILQYS--NLPSEAPLVTEECRPPSNWPDVG--TISFHNLQIRYA--EHLPSVLKNISCTFPGRKKVG 1293 (1513)
Q Consensus 1220 ~~~le~~~~sveRi~e~~--~~~~e~~~~~~~~~~~~~wp~~g--~I~f~nvsf~Y~--~~~~~vLk~is~~I~~Gekvg 1293 (1513)
..+.|+.+.++||..++. +.+.|.+......+++. ..| .++++||+++|+ ++.+.+|+|||++|+|||++|
T Consensus 717 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~a 793 (1394)
T TIGR00956 717 GETSASNKNDIEAGEVLGSTDLTDESDDVNDEKDMEK---ESGEDIFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTA 793 (1394)
T ss_pred ccccccccccccccccCCCCccccccccccccccccc---cCCCceEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEE
Confidence 345667788999998763 34444332221111221 134 479999999995 334579999999999999999
Q ss_pred EEcCCCCCHHHHHHHHhccCC---CCCcEEEEcCeeCCCCChHHhhhceEEEcCCCc-cccCcHhhccCCC------CCC
Q 000432 1294 VVGRTGSGKSTLIQAIFRIVE---PTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPT-LFDGTVRGNLDPL------VQY 1363 (1513)
Q Consensus 1294 IVGrTGSGKSTLl~lL~rl~e---p~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~-LF~gTIR~NLdp~------~~~ 1363 (1513)
|+||||||||||+++|.|+.+ |++|+|.+||.++. .++|++++||||++. ++..||||||++. .+.
T Consensus 794 I~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~ 869 (1394)
T TIGR00956 794 LMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSV 869 (1394)
T ss_pred EECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCC
Confidence 999999999999999999998 78999999999985 357899999999876 4567999999741 134
Q ss_pred CHH----HHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCC-EEEEecCCCCCCHHHHHHHH
Q 000432 1364 SDK----QVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSS-ILVLDEATASVDSATDGVIQ 1438 (1513)
Q Consensus 1364 sde----ei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~-ILiLDEaTSslD~~Te~~Iq 1438 (1513)
+++ .+.++++..++.+ ..|+.+++.|.+||||||||++|||||+++|+ ||+||||||+||..+...|+
T Consensus 870 ~~~~~~~~v~~~l~~l~L~~-------~~d~~v~~~~~~LSgGqrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~ 942 (1394)
T TIGR00956 870 SKSEKMEYVEEVIKLLEMES-------YADAVVGVPGEGLNVEQRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSIC 942 (1394)
T ss_pred CHHHHHHHHHHHHHHcCChh-------hCCCeeCCCCCCCCHHHhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHH
Confidence 443 3567788777654 36899999899999999999999999999997 99999999999999999999
Q ss_pred HHHHHh-cCCcEEEEeccChhhH--hhcCEEEEEeCC-EEeEecChhH
Q 000432 1439 KIISQE-FKDRTVVTIAHRIHTV--IDSDLVLVLSDG-RIAEYDSPTK 1482 (1513)
Q Consensus 1439 ~~i~~~-~~~~TvI~IAHRl~ti--~~~DrIlVLd~G-~IvE~Gtp~e 1482 (1513)
+.|++. .+++|||+++|++++. ..||+|++|++| +++++|++.+
T Consensus 943 ~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~~~~ 990 (1394)
T TIGR00956 943 KLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGDLGE 990 (1394)
T ss_pred HHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECCccc
Confidence 999987 4689999999999974 469999999997 9999999743
No 66
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=2e-66 Score=655.82 Aligned_cols=448 Identities=23% Similarity=0.374 Sum_probs=343.7
Q ss_pred eEEEEeEEEEeCCC-CCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccC-----CCcEEEECC---------
Q 000432 631 EVEVVNGKFSWNPE-SSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQK-----MAGTVKISG--------- 695 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~-~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~-----~~G~i~~~g--------- 695 (1513)
-++++|++++|+.. ..+++|+|+||+|++||+++|+||||||||||+++|+|.++| ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 48999999999632 125799999999999999999999999999999999999986 799998876
Q ss_pred --------eEEEEcCCCc--ccC-ccHHHHHccCC----CCCch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCC
Q 000432 696 --------TKAYVPQSPW--ILT-GNIRENILFGN----QYDSC----KYDRTVEACALVKDFELFASGDLTEIGERGIN 756 (1513)
Q Consensus 696 --------~~ayv~Q~~~--l~~-~ti~eNI~fg~----~~~~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~ 756 (1513)
.++||+|+|. ++. .|+++|+.++. ..+.+ +.+++++.+++.+.. ........+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~--------~~~~~~~~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAA--------KRLTDYPHQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChH--------HHHhhCCcc
Confidence 3699999985 443 58999987431 12221 222233333332100 012345678
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCcccc-CCEEEEEeCCeE
Q 000432 757 MSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPA-ADIILVMENGRI 833 (1513)
Q Consensus 757 LSGGQkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~-~d~i~vl~~G~i 833 (1513)
|||||||||+||||++.+|+++|||||||+||+++.+.+.+ .+..+. .++|+|+|||+++.+.. ||+|++|++|++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i 235 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQ-LLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRC 235 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHH-HHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999887764 565543 37999999999998764 999999999999
Q ss_pred EEecChHHHHhcCccHHHHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhhhcCCC
Q 000432 834 AQAGRFEELLKQNIGFEVLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITEKGGK 913 (1513)
Q Consensus 834 ~~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (1513)
++.|+.+++.... . . .
T Consensus 236 ~~~g~~~~~~~~~----------------------------------~----------------------~-~------- 251 (529)
T PRK15134 236 VEQNRAATLFSAP----------------------------------T----------------------H-P------- 251 (529)
T ss_pred EEeCCHHHHhhCC----------------------------------C----------------------C-H-------
Confidence 9988876543110 0 0 0
Q ss_pred chhhhHhhhcccchHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHH
Q 000432 914 LVQEEEREKGSIGKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVG 993 (1513)
Q Consensus 914 ~~~~e~~~~g~v~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~ 993 (1513)
..+ .++. . .
T Consensus 252 ----~~~-----------~~~~----------------------------------~-----~----------------- 260 (529)
T PRK15134 252 ----YTQ-----------KLLN----------------------------------S-----E----------------- 260 (529)
T ss_pred ----HHH-----------HHHH----------------------------------h-----C-----------------
Confidence 000 0000 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHH
Q 000432 994 SSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTI 1073 (1513)
Q Consensus 994 ~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l 1073 (1513)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhh
Q 000432 1074 GVMSQVAWQVFVIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNH 1153 (1513)
Q Consensus 1074 ~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~ 1153 (1513)
T Consensus 261 -------------------------------------------------------------------------------- 260 (529)
T PRK15134 261 -------------------------------------------------------------------------------- 260 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1154 SRPWFHNVSAMEWLCFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERI 1233 (1513)
Q Consensus 1154 ~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi 1233 (1513)
..
T Consensus 261 ------------------------------------~~------------------------------------------ 262 (529)
T PRK15134 261 ------------------------------------PS------------------------------------------ 262 (529)
T ss_pred ------------------------------------cc------------------------------------------
Confidence 00
Q ss_pred HHhcCCCCCCCCcccCCCCCCCCCCCceEEEEEEEEEEcC---------CCCcceeeeeEEeeCCcEEEEEcCCCCCHHH
Q 000432 1234 LQYSNLPSEAPLVTEECRPPSNWPDVGTISFHNLQIRYAE---------HLPSVLKNISCTFPGRKKVGVVGRTGSGKST 1304 (1513)
Q Consensus 1234 ~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~---------~~~~vLk~is~~I~~GekvgIVGrTGSGKST 1304 (1513)
.++..+ . ++ ....|+++|++++|+. +...+|+|+||+|++||++||+|+|||||||
T Consensus 263 -----~~~~~~---~---~~----~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKST 327 (529)
T PRK15134 263 -----GDPVPL---P---EP----ASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKST 327 (529)
T ss_pred -----cccccc---C---CC----CCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHH
Confidence 000000 0 00 0114899999999952 1245999999999999999999999999999
Q ss_pred HHHHHhccCCCCCcEEEEcCeeCCCCChHH---hhhceEEEcCCC--cccc-CcHhhccCCC---C--CCC----HHHHH
Q 000432 1305 LIQAIFRIVEPTMGSIIIDNVDITKIGLHD---LRSRLGIIPQDP--TLFD-GTVRGNLDPL---V--QYS----DKQVW 1369 (1513)
Q Consensus 1305 Ll~lL~rl~ep~~G~I~IDGvdI~~i~l~~---LR~~isiVpQdp--~LF~-gTIR~NLdp~---~--~~s----deei~ 1369 (1513)
|+++|.|++ |++|+|.+||.++..++.++ +|++++||||+| .+|. .|+++|+... . ..+ ++++.
T Consensus 328 Llk~l~Gl~-~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~ 406 (529)
T PRK15134 328 TGLALLRLI-NSQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVI 406 (529)
T ss_pred HHHHHhCcC-CCCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHHHHHH
Confidence 999999998 58999999999998776544 478899999998 3665 4999999631 1 111 24567
Q ss_pred HHHHHcCCcH-HHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--
Q 000432 1370 EALDKCQLGD-LVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK-- 1446 (1513)
Q Consensus 1370 ~aL~~~~l~~-~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~-- 1446 (1513)
++++..++.+ ... . ...+||||||||++||||++.+|+||||||||++||+.+.+.+.+.|++..+
T Consensus 407 ~~l~~~~l~~~~~~-------~----~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~ 475 (529)
T PRK15134 407 AVMEEVGLDPETRH-------R----YPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKH 475 (529)
T ss_pred HHHHHcCCCHHHHh-------c----CCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhh
Confidence 7788887752 222 2 2357999999999999999999999999999999999999999999987642
Q ss_pred CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcC
Q 000432 1447 DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLERE 1487 (1513)
Q Consensus 1447 ~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~ 1487 (1513)
++|||+|+|+++.+.. ||+|++|++|+|++.|+++++++++
T Consensus 476 ~~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 517 (529)
T PRK15134 476 QLAYLFISHDLHVVRALCHQVIVLRQGEVVEQGDCERVFAAP 517 (529)
T ss_pred CCEEEEEeCCHHHHHHhcCeEEEEECCEEEEEcCHHHHhcCC
Confidence 7899999999999876 9999999999999999999998754
No 67
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=2.7e-64 Score=638.86 Aligned_cols=526 Identities=16% Similarity=0.175 Sum_probs=389.9
Q ss_pred HHHHHHhhhhhhHHHHHHHHHHHHHHHHHhh-hhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 930 YWSYLTAVKGGALVPIILLAQSSFQVLQVAS-NYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLVAIT 1008 (1513)
Q Consensus 930 ~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~ 1008 (1513)
++.|++...+..+ +.+++.++..++.++. ++..++..|... .... .+..++++.++..++.+++.++....
T Consensus 4 ~~~~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~i~~~lid~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (547)
T PRK10522 4 LRLVWRQYRWPFI--SVMALSLASAALGIGLIAFINQRLIETAD---TSLL---VLPEFLGLLLLLMAVTLGSQLALTTL 75 (547)
T ss_pred HHHHHHhhhHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhcccc---ccch---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455554443322 2233344445555543 344445555421 1111 11122233333345667888888999
Q ss_pred HHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 000432 1009 GLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVIFI 1088 (1513)
Q Consensus 1009 ~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~i 1088 (1513)
+.+...+++.++++++++.|++||++.++|++++|+++|++.+...+. .+..++..++.+++.++++++++|.++++++
T Consensus 76 ~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l 154 (547)
T PRK10522 76 GHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAAYLAWLSPKMLLVTA 154 (547)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 999999999999999999999999999999999999999999988665 5677888888899999999999999998777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchH---HHHHHHHHHHHHhhchhHHHHHHHHH
Q 000432 1089 PVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQE---DRFTNANLSLIDNHSRPWFHNVSAME 1165 (1513)
Q Consensus 1089 p~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e---~~f~~~~~~~~d~~~~~~~~~~~~~~ 1165 (1513)
..+++.+++..++.+..+...+......+...+++.|.++|+++++ ++.+ +++.+++.+..+...+.......
T Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 230 (547)
T PRK10522 155 IWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRHHIIRADT--- 230 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHhhhHHHHH---
Confidence 6666655555555555555555556778889999999999999996 4443 35566666655554443332221
Q ss_pred HHHHHHHHHHHHHH-HHHH-HHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 000432 1166 WLCFRLNLLSNFVF-AFSL-VVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEA 1243 (1513)
Q Consensus 1166 wl~~~l~~~~~~~~-~~~~-~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~ 1243 (1513)
+......+..++. .+.. .+......+..+.+.++.+..+...+..++..+...+.+++....+.+|+.++.+.|+|+
T Consensus 231 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~ 309 (547)
T PRK10522 231 -FHLSAVNWSNIMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKA 309 (547)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 1111111111111 1111 111110011123344444444555566788888899999999999999999997655432
Q ss_pred CCcccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEc
Q 000432 1244 PLVTEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIID 1323 (1513)
Q Consensus 1244 ~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~ID 1323 (1513)
+. ++..+. |..+.|+++||+|+|+++ +++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+|
T Consensus 310 ~~--~~~~~~---~~~~~i~~~~v~f~y~~~-~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~ 383 (547)
T PRK10522 310 EF--PRPQAF---PDWQTLELRNVTFAYQDN-GFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLD 383 (547)
T ss_pred cc--cccccc---CcCceEEEEEEEEEeCCC-CeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEC
Confidence 21 111111 223689999999999744 469999999999999999999999999999999999999999999999
Q ss_pred CeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhH
Q 000432 1324 NVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQ 1403 (1513)
Q Consensus 1324 GvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQ 1403 (1513)
|+|+++++.+++|+++++|||||++|+||+++| ..+.+|++++++++++++.+.+.. ++|. .+|.+|||||
T Consensus 384 g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~~G~~LSgGq 454 (547)
T PRK10522 384 GKPVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGR-----ISNLKLSKGQ 454 (547)
T ss_pred CEECCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccC-----CCCCCCCHHH
Confidence 999999999999999999999999999999999 236788999999999999877653 4442 2589999999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCEEeEe-cCh
Q 000432 1404 RQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEY-DSP 1480 (1513)
Q Consensus 1404 RQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~-Gtp 1480 (1513)
|||++||||++++|+|||||||||+||++|++.|.+.+.+.. +++|+|+||||++++..||+|++|++|+++|. |++
T Consensus 455 ~qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~~~~~ 534 (547)
T PRK10522 455 KKRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELTGEE 534 (547)
T ss_pred HHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEecCCc
Confidence 999999999999999999999999999999999999987655 48999999999999999999999999999998 555
Q ss_pred hHHH
Q 000432 1481 TKLL 1484 (1513)
Q Consensus 1481 ~eLl 1484 (1513)
.+-.
T Consensus 535 ~~~~ 538 (547)
T PRK10522 535 RDAA 538 (547)
T ss_pred hhhh
Confidence 4433
No 68
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=5.7e-64 Score=692.47 Aligned_cols=549 Identities=17% Similarity=0.179 Sum_probs=404.1
Q ss_pred chhHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 302 PSIYKAIFFFIRKKA-AINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGA 380 (1513)
Q Consensus 302 ~~l~~~l~~~~~~~~-~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~ 380 (1513)
.+.++.+++..++.. ++.+++.++..++....|+.++...+......... ...+.+ ..+++..++..++.....+..
T Consensus 952 ~~~y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~~~~~-~~~~~~-~iy~~l~i~~~~~~~~~~~~~ 1029 (1522)
T TIGR00957 952 LSVYWDYMKAIGLFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVNGTQN-NTSLRL-SVYGALGILQGFAVFGYSMAV 1029 (1522)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCC-CcchHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 456667776653322 23333444455566677777777665321111111 011111 112222222222222223344
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 381 RQLGLRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFY-SNYMFMLPVQISLAIYILRTNLGLGSL 459 (1513)
Q Consensus 381 ~~~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~l~~L~~~lg~~~l 459 (1513)
...+.+.-..+...+|++.++.+..+++++++|+|+|++++|++.+.+.+.. +..+...++.++.++++++....+.++
T Consensus 1030 ~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li~~~~~~~~~~~ 1109 (1522)
T TIGR00957 1030 SIGGIQASRVLHQDLLHNKLRSPMSFFERTPSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALIVILLATPIAAV 1109 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCChhHhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5677888888889999999999999999999999999999999999988753 334444555555544444332223222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 460 AALAATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSA 539 (1513)
Q Consensus 460 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~ 539 (1513)
+.++++++...+..+..+..+..++...+.++...+.++|.++|+++||.|++|+.|.++..+..+...+..........
T Consensus 1110 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 1189 (1522)
T TIGR00957 1110 IIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQKAYYPSIVANR 1189 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222223333333444444444555667778899999999999999999999998887766554443322222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHh-cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 000432 540 TSAFIFWGSPTFISVVTFGACMLL-GIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRD 618 (1513)
Q Consensus 540 ~~~~~~~~~p~~v~~~~f~~~~~~-~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~ 618 (1513)
+.......... +.++..+.+.+. .+.+++|.+..++.+...+..|+..+...+..+.++.+|.+||.++++.+++.+.
T Consensus 1190 ~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eRi~~~~~~~~e~~~ 1268 (1522)
T TIGR00957 1190 WLAVRLECVGN-CIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVERLKEYSETEKEAPW 1268 (1522)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc
Confidence 22111111111 112223333333 4779999999999999999999999999999999999999999999976543321
Q ss_pred c-cc-ccCC-CCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC
Q 000432 619 A-VE-YVPK-GRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG 695 (1513)
Q Consensus 619 ~-~~-~~~~-~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g 695 (1513)
. .. ..+. .+..+.|+|+|++|+|+++ .+++|+|+||+|++||++||||++|||||||+++|+|+++|++|+|.+||
T Consensus 1269 ~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~~~~G~I~IdG 1347 (1522)
T TIGR00957 1269 QIQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINESAEGEIIIDG 1347 (1522)
T ss_pred cccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCccCCCCeEEECC
Confidence 1 11 1111 1234689999999999754 34799999999999999999999999999999999999999999999999
Q ss_pred e-------------EEEEcCCCcccCccHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHH
Q 000432 696 T-------------KAYVPQSPWILTGNIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQK 762 (1513)
Q Consensus 696 ~-------------~ayv~Q~~~l~~~ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQk 762 (1513)
. ++||||+|.+|+|||||||....++++++..++++.|++.+.++.+|+|++|+|||+|.|||||||
T Consensus 1348 ~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~G~~LSgGQr 1427 (1522)
T TIGR00957 1348 LNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFSQYSDEEVWWALELAHLKTFVSALPDKLDHECAEGGENLSVGQR 1427 (1522)
T ss_pred EEccccCHHHHHhcCeEECCCCcccCccHHHHcCcccCCCHHHHHHHHHHcCcHHHHhhCccCCCceecCCCCcCCHHHH
Confidence 4 599999999999999999983336788889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHH
Q 000432 763 QRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEEL 842 (1513)
Q Consensus 763 qRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l 842 (1513)
||++||||++++|+|+|||||||+||++|++.| ++.++...+++|+|+||||++++..||+|+||++|+|+|.|+|+||
T Consensus 1428 Qrl~LARALLr~~~ILiLDEaTSalD~~Te~~I-q~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~G~IvE~G~~~eL 1506 (1522)
T TIGR00957 1428 QLVCLARALLRKTKILVLDEATAAVDLETDNLI-QSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDKGEVAEFGAPSNL 1506 (1522)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHH-HHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 999999999999999999999999999997666 6678888899999999999999999999999999999999999999
Q ss_pred HhcCccHHHHHHh
Q 000432 843 LKQNIGFEVLVGA 855 (1513)
Q Consensus 843 ~~~~~~~~~l~~~ 855 (1513)
+++++.|++++++
T Consensus 1507 l~~~~~f~~l~~~ 1519 (1522)
T TIGR00957 1507 LQQRGIFYSMAKD 1519 (1522)
T ss_pred HhCCCHHHHHHHH
Confidence 9999999998864
No 69
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.2e-64 Score=589.01 Aligned_cols=527 Identities=23% Similarity=0.287 Sum_probs=417.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCcc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 000432 323 AVINAATSYVGPYLINDFVNFLTDKKSRS--LESGYLLALAFLGAKMVETIAQRQWIFGARQLGLRLRAALISHLYRKGL 400 (1513)
Q Consensus 323 ~l~~~~~~~~~P~ll~~li~~~~~~~~~~--~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~K~L 400 (1513)
.+..-.+....|++++..+|.+...+..+ .......+.+++++.+..+++.....+....+..++-......+|++.+
T Consensus 39 l~~aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~~ 118 (591)
T KOG0057|consen 39 LLGAKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHLM 118 (591)
T ss_pred HHhhhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33335566778999999999886322111 1122344556667777777777777777788899999999999999999
Q ss_pred cCCcccccCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Q 000432 401 HLSSQSRQSHTSGEIINYMSVDVQRISDFIFY-SNYMFMLPVQISLAIYILRTNLGLGSLAA-LAATLTVMTCNIPITRI 478 (1513)
Q Consensus 401 ~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~l~~L~~~lg~~~l~~-l~~~~~~~~~~~~~~~~ 478 (1513)
.++.+++.+..+|++.+.|..-...|..++.- +..+....+.+.+....++...|.+..+. +..+.....+...+..+
T Consensus 119 ~ld~~~~~~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~ 198 (591)
T KOG0057|consen 119 SLDLSFFLSRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVVTRW 198 (591)
T ss_pred hhhHHhhcCCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEeehhH
Confidence 99999999999999999999988888887753 33444555667777778888999865433 33444444456667888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Q 000432 479 QKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLES-LRQVECIWLWKSLRLSATSAFIF-WGSPTFISVVT 556 (1513)
Q Consensus 479 ~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~-~R~~E~~~~~~~~~~~~~~~~~~-~~~p~~v~~~~ 556 (1513)
..++++++.++.++-.+..-+.|.|-.+||.|+-|+...++... +++.|...++....+...+..-- ..+..+..++.
T Consensus 199 Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~ 278 (591)
T KOG0057|consen 199 RNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTFIMV 278 (591)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999998888754 34444443333322222221110 01111222222
Q ss_pred HHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCCCCcceEEEEe
Q 000432 557 FGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAVEYVPKGRSEFEVEVVN 636 (1513)
Q Consensus 557 f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~I~~~~ 636 (1513)
.+..-+..+.+|.+......+++.+|..|+..|...+..+.|+..-+.-....++.++...+. ..|....+..|+|+|
T Consensus 279 l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~~--~~~i~~~~~~I~F~d 356 (591)
T KOG0057|consen 279 LGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQEA--ALPIELFGGSIEFDD 356 (591)
T ss_pred HHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhhc--cCCcccCCCcEEEEe
Confidence 333334567899999999999999999999999999999999988877666554433322111 122223456799999
Q ss_pred EEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------EEEEcCC
Q 000432 637 GKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------KAYVPQS 703 (1513)
Q Consensus 637 ~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~ayv~Q~ 703 (1513)
++|+|.+ ++++|+++||+|++||++||||+|||||||++++|+++++ ++|+|.+||. +|||||+
T Consensus 357 V~f~y~~--k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~Ig~VPQd 433 (591)
T KOG0057|consen 357 VHFSYGP--KRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSIGVVPQD 433 (591)
T ss_pred eEEEeCC--CCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhheeEeCCc
Confidence 9999985 3579999999999999999999999999999999999999 9999999994 5999999
Q ss_pred CcccCccHHHHHccCCCCC-chHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCEEEeeC
Q 000432 704 PWILTGNIRENILFGNQYD-SCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLLDD 782 (1513)
Q Consensus 704 ~~l~~~ti~eNI~fg~~~~-~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~illLDe 782 (1513)
..|||+||.+||.+|++.. .++..++++..++++-+..||+|++|.+||+|..|||||||||+||||+++||+|+++||
T Consensus 434 ~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~Il~~DE 513 (591)
T KOG0057|consen 434 SVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAPILLLDE 513 (591)
T ss_pred ccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCCeEEecC
Confidence 9999999999999999853 344455566667888899999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHHHHHHh
Q 000432 783 PFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQNIGFEVLVGA 855 (1513)
Q Consensus 783 p~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~l~~~ 855 (1513)
|||+||.+|++.+++. +++.+.+||+|+|.||+++++.||+|++++||++.+.|+|+|+++..+.|.+++..
T Consensus 514 aTS~LD~~TE~~i~~~-i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~s~~~~~~w~~ 585 (591)
T KOG0057|consen 514 ATSALDSETEREILDM-IMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAPSELYADLWTT 585 (591)
T ss_pred cccccchhhHHHHHHH-HHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhhhhHHHHHhcc
Confidence 9999999999999864 66688999999999999999999999999999999999999999988888888753
No 70
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-65 Score=645.65 Aligned_cols=443 Identities=22% Similarity=0.334 Sum_probs=338.3
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccC--CCcEEEECCe------------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQK--MAGTVKISGT------------ 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~--~~G~i~~~g~------------ 696 (1513)
-++++|++++|+. +++|+|+||+|++|++++|+||||||||||+++|+|.++| ++|+|.++|.
T Consensus 5 ~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFGG---VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeCC---eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 4899999999952 4799999999999999999999999999999999999986 8999999872
Q ss_pred --EEEEcCCCcccC-ccHHHHHccCCCC------CchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHH
Q 000432 697 --KAYVPQSPWILT-GNIRENILFGNQY------DSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQI 767 (1513)
Q Consensus 697 --~ayv~Q~~~l~~-~ti~eNI~fg~~~------~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~l 767 (1513)
++||+|++.++. .|++||+.++... +.+...+.++ +-++.+ |..........+||||||||++|
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~-----~~l~~~--~l~~~~~~~~~~LSgGqkqrv~l 154 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQ-----KLLAQL--KLDINPATPVGNLGLGQQQLVEI 154 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHH-----HHHHHc--CCCCCcccchhhCCHHHHHHHHH
Confidence 699999998876 4999999987532 1111111111 112222 11112334556899999999999
Q ss_pred HHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000432 768 ARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGI-LKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 768 ARal~~~~~illLDep~salD~~~~~~i~~~~~~~~-~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
|||+..+|+++|||||||+||+.....+.+ .+..+ .+++|+|+|||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 155 a~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~- 232 (506)
T PRK13549 155 AKALNKQARLLILDEPTASLTESETAVLLD-IIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTE- 232 (506)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCH-
Confidence 999999999999999999999999877764 55554 357899999999998865 99999999999987665322100
Q ss_pred CccHHHHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhhhcCCCchhhhHhhhccc
Q 000432 846 NIGFEVLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITEKGGKLVQEEEREKGSI 925 (1513)
Q Consensus 846 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v 925 (1513)
. +
T Consensus 233 ------------------------------------------------------------~-----------~------- 234 (506)
T PRK13549 233 ------------------------------------------------------------D-----------D------- 234 (506)
T ss_pred ------------------------------------------------------------H-----------H-------
Confidence 0 0
Q ss_pred chHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 926 GKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLV 1005 (1513)
Q Consensus 926 ~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~ 1005 (1513)
......+ . +
T Consensus 235 -------~~~~~~~------------------------------~-----~----------------------------- 243 (506)
T PRK13549 235 -------IITMMVG------------------------------R-----E----------------------------- 243 (506)
T ss_pred -------HHHHhhC------------------------------c-----C-----------------------------
Confidence 0000000 0 0
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q 000432 1006 AITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFV 1085 (1513)
Q Consensus 1006 ~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~l 1085 (1513)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHH
Q 000432 1086 IFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAME 1165 (1513)
Q Consensus 1086 v~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~ 1165 (1513)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Q 000432 1166 WLCFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPL 1245 (1513)
Q Consensus 1166 wl~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~ 1245 (1513)
.. + . .|.+.+
T Consensus 244 ----------------------------~~------------------------------------~---~--~~~~~~- 253 (506)
T PRK13549 244 ----------------------------LT------------------------------------A---L--YPREPH- 253 (506)
T ss_pred ----------------------------cc------------------------------------c---c--cccccc-
Confidence 00 0 0 000000
Q ss_pred cccCCCCCCCCCCCceEEEEEEEEEEcC-CCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC-CCCcEEEEc
Q 000432 1246 VTEECRPPSNWPDVGTISFHNLQIRYAE-HLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE-PTMGSIIID 1323 (1513)
Q Consensus 1246 ~~~~~~~~~~wp~~g~I~f~nvsf~Y~~-~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e-p~~G~I~ID 1323 (1513)
+ +....|+++|++++|+. +..++|+|+||+|++||++||+|++|||||||+++|.|+++ |++|+|.+|
T Consensus 254 ------~----~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~~~~G~i~~~ 323 (506)
T PRK13549 254 ------T----IGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPGRWEGEIFID 323 (506)
T ss_pred ------C----CCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCcEEEEC
Confidence 0 01125899999999953 12359999999999999999999999999999999999999 599999999
Q ss_pred CeeCCCCCh-HHhhhceEEEcCCC---cccc-CcHhhccCCC--CC------CC----HHHHHHHHHHcCCcHHHHhhhc
Q 000432 1324 NVDITKIGL-HDLRSRLGIIPQDP---TLFD-GTVRGNLDPL--VQ------YS----DKQVWEALDKCQLGDLVRAKEE 1386 (1513)
Q Consensus 1324 GvdI~~i~l-~~LR~~isiVpQdp---~LF~-gTIR~NLdp~--~~------~s----deei~~aL~~~~l~~~I~~lp~ 1386 (1513)
|.|+...+. +..|.+++|+||+| .+|. -|+.+|+... .. .+ .+++.++++.+++.+ +
T Consensus 324 g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~ 397 (506)
T PRK13549 324 GKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKT------A 397 (506)
T ss_pred CEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccC------C
Confidence 999876543 34677899999997 3664 5999999631 11 11 134566677766531 1
Q ss_pred cccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cC
Q 000432 1387 KLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SD 1464 (1513)
Q Consensus 1387 gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~D 1464 (1513)
..|.. ...||||||||++||||++.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||
T Consensus 398 ~~~~~----~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~~~~~~~d 473 (506)
T PRK13549 398 SPELA----IARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELPEVLGLSD 473 (506)
T ss_pred Ccccc----cccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCC
Confidence 12333 35799999999999999999999999999999999999999999998753 47899999999999876 99
Q ss_pred EEEEEeCCEEeEecChhHHH
Q 000432 1465 LVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1465 rIlVLd~G~IvE~Gtp~eLl 1484 (1513)
+|++|++|+++..|+++++.
T Consensus 474 ~v~~l~~G~i~~~~~~~~~~ 493 (506)
T PRK13549 474 RVLVMHEGKLKGDLINHNLT 493 (506)
T ss_pred EEEEEECCEEEEEeccccCC
Confidence 99999999999999988764
No 71
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-65 Score=646.93 Aligned_cols=440 Identities=19% Similarity=0.327 Sum_probs=334.9
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC--------------e
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG--------------T 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g--------------~ 696 (1513)
-++++|++++|+. +++|+|+||+|++||+++|+||||||||||+++|+|+.+|++|+|.++| .
T Consensus 5 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFGP---VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 4899999999963 4799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEcCCCcccCc-cHHHHHccCCCC----------CchHH-HHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHH
Q 000432 697 KAYVPQSPWILTG-NIRENILFGNQY----------DSCKY-DRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQR 764 (1513)
Q Consensus 697 ~ayv~Q~~~l~~~-ti~eNI~fg~~~----------~~~~~-~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqR 764 (1513)
++||+|++.++.. |++||+.++... +.+.. +++.+ + ++.+ |..........+||||||||
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---l~~~--gl~~~~~~~~~~LSgG~~qr 153 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAM---M---LLRV--GLKVDLDEKVANLSISHKQM 153 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHH---H---HHHc--CCCCCcccchhhCCHHHHHH
Confidence 7999999987764 999999886420 11111 11111 1 1111 11112234456899999999
Q ss_pred HHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHH
Q 000432 765 IQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEEL 842 (1513)
Q Consensus 765 i~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l 842 (1513)
|+||||++.+|+++||||||++||+.+.+.+.+ .+..+. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 v~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 232 (510)
T PRK09700 154 LEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFL-IMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDV 232 (510)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhC
Confidence 999999999999999999999999999887764 555443 47999999999999865 999999999999887765442
Q ss_pred HhcCccHHHHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhhhcCCCchhhhHhhh
Q 000432 843 LKQNIGFEVLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITEKGGKLVQEEEREK 922 (1513)
Q Consensus 843 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~ 922 (1513)
... +.
T Consensus 233 ~~~-----~~---------------------------------------------------------------------- 237 (510)
T PRK09700 233 SND-----DI---------------------------------------------------------------------- 237 (510)
T ss_pred CHH-----HH----------------------------------------------------------------------
Confidence 100 00
Q ss_pred cccchHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHH
Q 000432 923 GSIGKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRA 1002 (1513)
Q Consensus 923 g~v~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~ 1002 (1513)
.....+. .. .
T Consensus 238 -----------~~~~~~~-----------------------------~~----~-------------------------- 247 (510)
T PRK09700 238 -----------VRLMVGR-----------------------------EL----Q-------------------------- 247 (510)
T ss_pred -----------HHHhcCC-----------------------------Cc----c--------------------------
Confidence 0000000 00 0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q 000432 1003 MLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQ 1082 (1513)
Q Consensus 1003 ~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~ 1082 (1513)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHH
Q 000432 1083 VFVIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVS 1162 (1513)
Q Consensus 1083 l~lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~ 1162 (1513)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK09700 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Q 000432 1163 AMEWLCFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSE 1242 (1513)
Q Consensus 1163 ~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e 1242 (1513)
. + +...++.
T Consensus 248 ----------------------------~----------------------------------------~---~~~~~~~ 256 (510)
T PRK09700 248 ----------------------------N----------------------------------------R---FNAMKEN 256 (510)
T ss_pred ----------------------------c----------------------------------------c---ccccccc
Confidence 0 0 0000000
Q ss_pred CCCcccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEE
Q 000432 1243 APLVTEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIII 1322 (1513)
Q Consensus 1243 ~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~I 1322 (1513)
.+ ++ +....|+++|++++|. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+
T Consensus 257 ~~-------~~---~~~~~l~~~~l~~~~~----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~ 322 (510)
T PRK09700 257 VS-------NL---AHETVFEVRNVTSRDR----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRL 322 (510)
T ss_pred cc-------cC---CCCcEEEEeCccccCC----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEE
Confidence 00 00 0112599999999763 2899999999999999999999999999999999999999999999
Q ss_pred cCeeCCCCCh-HHhhhceEEEcCCC---ccccC-cHhhccCCCCC------------CC----HHHHHHHHHHcCCcHHH
Q 000432 1323 DNVDITKIGL-HDLRSRLGIIPQDP---TLFDG-TVRGNLDPLVQ------------YS----DKQVWEALDKCQLGDLV 1381 (1513)
Q Consensus 1323 DGvdI~~i~l-~~LR~~isiVpQdp---~LF~g-TIR~NLdp~~~------------~s----deei~~aL~~~~l~~~I 1381 (1513)
||.++...+. ..+|++++||||++ .+|.+ |+++|+..... .+ .+++.++++..++..
T Consensus 323 ~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-- 400 (510)
T PRK09700 323 NGKDISPRSPLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKC-- 400 (510)
T ss_pred CCEECCCCCHHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCC--
Confidence 9999876543 45778999999984 57765 99999864211 01 123556666666530
Q ss_pred HhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhH
Q 000432 1382 RAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTV 1460 (1513)
Q Consensus 1382 ~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti 1460 (1513)
+..+.++ ..||||||||++|||||+++|+||||||||++||..+.+.+.+.|++.. ++.|||+|+|+++.+
T Consensus 401 ----~~~~~~~----~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~ 472 (510)
T PRK09700 401 ----HSVNQNI----TELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEI 472 (510)
T ss_pred ----CCccCcc----ccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHH
Confidence 1233443 4699999999999999999999999999999999999999999998753 478999999999988
Q ss_pred hh-cCEEEEEeCCEEeEecChhH
Q 000432 1461 ID-SDLVLVLSDGRIAEYDSPTK 1482 (1513)
Q Consensus 1461 ~~-~DrIlVLd~G~IvE~Gtp~e 1482 (1513)
.. ||+|++|++|++++.+++.+
T Consensus 473 ~~~~d~i~~l~~G~i~~~~~~~~ 495 (510)
T PRK09700 473 ITVCDRIAVFCEGRLTQILTNRD 495 (510)
T ss_pred HhhCCEEEEEECCEEEEEecCcc
Confidence 65 99999999999999887633
No 72
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=3.3e-65 Score=643.84 Aligned_cols=219 Identities=27% Similarity=0.445 Sum_probs=180.1
Q ss_pred eEEEEEEEEEEcC---CCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEc-Ce---eCCCCC--
Q 000432 1261 TISFHNLQIRYAE---HLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIID-NV---DITKIG-- 1331 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~---~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~ID-Gv---dI~~i~-- 1331 (1513)
.|+++|++++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++ |. ++...+
T Consensus 279 ~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~ 358 (520)
T TIGR03269 279 IIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPD 358 (520)
T ss_pred eEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchh
Confidence 5999999999953 22459999999999999999999999999999999999999999999996 64 344433
Q ss_pred -hHHhhhceEEEcCCCccccC-cHhhccCC-CC-CC----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhH
Q 000432 1332 -LHDLRSRLGIIPQDPTLFDG-TVRGNLDP-LV-QY----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQ 1403 (1513)
Q Consensus 1332 -l~~LR~~isiVpQdp~LF~g-TIR~NLdp-~~-~~----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQ 1403 (1513)
...+|++++|+||++.+|.. |+++|+.. .. .. .++++.++++..++.+.- .++-++.+ ...|||||
T Consensus 359 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~--~~~~~~~~----~~~LSgGq 432 (520)
T TIGR03269 359 GRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELARMKAVITLKMVGFDEEK--AEEILDKY----PDELSEGE 432 (520)
T ss_pred hHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCcc--chhhhhCC----hhhCCHHH
Confidence 23567889999999988875 99999953 11 11 124566778888875310 00012333 34699999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecCh
Q 000432 1404 RQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSP 1480 (1513)
Q Consensus 1404 RQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp 1480 (1513)
|||++|||||+.+|+||||||||++||+.+.+.+.+.|++..+ +.|||+|+|+++.+.. ||||++|++|++++.|++
T Consensus 433 ~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~~ 512 (520)
T TIGR03269 433 RHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGDP 512 (520)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCH
Confidence 9999999999999999999999999999999999999987642 7899999999999876 999999999999999999
Q ss_pred hHHHh
Q 000432 1481 TKLLE 1485 (1513)
Q Consensus 1481 ~eLl~ 1485 (1513)
+++.+
T Consensus 513 ~~~~~ 517 (520)
T TIGR03269 513 EEIVE 517 (520)
T ss_pred HHHHh
Confidence 88765
No 73
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-64 Score=634.31 Aligned_cols=201 Identities=17% Similarity=0.319 Sum_probs=174.4
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhce
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRL 1339 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~i 1339 (1513)
..|+++|++++|++. ++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.++| ++++
T Consensus 318 ~~l~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-----------~~~i 384 (530)
T PRK15064 318 NALEVENLTKGFDNG--PLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSE-----------NANI 384 (530)
T ss_pred ceEEEEeeEEeeCCc--eeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-----------ceEE
Confidence 369999999999643 599999999999999999999999999999999999999999999998 3579
Q ss_pred EEEcCCCc--ccc-CcHhhccCCCC--CCCHHHHHHHHHHcCCc-HHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1340 GIIPQDPT--LFD-GTVRGNLDPLV--QYSDKQVWEALDKCQLG-DLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1340 siVpQdp~--LF~-gTIR~NLdp~~--~~sdeei~~aL~~~~l~-~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+|+||++. ++. .|+++|+.... ...++++.++|+..++. +.. +. ...+||||||||++||||+
T Consensus 385 ~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~----~~~~LSgGq~qrv~la~al 453 (530)
T PRK15064 385 GYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFSQDDI-------KK----SVKVLSGGEKGRMLFGKLM 453 (530)
T ss_pred EEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCChhHh-------cC----cccccCHHHHHHHHHHHHH
Confidence 99999984 443 59999986431 23456788889988874 322 22 3357999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEe-EecChhHHHhc
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIA-EYDSPTKLLER 1486 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~Iv-E~Gtp~eLl~~ 1486 (1513)
+++|+||||||||++||+.+...+.+.|++. +.|||+|+|+++.+.. ||+|++|++|+++ +.|+++++++.
T Consensus 454 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 454 MQKPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 9999999999999999999999999999875 4599999999999876 9999999999998 77999988765
No 74
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.1e-64 Score=636.15 Aligned_cols=446 Identities=21% Similarity=0.350 Sum_probs=339.9
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------- 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------- 696 (1513)
.++++|++++|+. +++|+|+||+|++|++++|+||||||||||+++|.|+++|++|+|.++|.
T Consensus 11 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 11 LLCARSISKQYSG---VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred eEEEEeEEEEeCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 5999999999963 46999999999999999999999999999999999999999999999872
Q ss_pred EEEEcCCCcccCc-cHHHHHccCCCCCc---hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHh
Q 000432 697 KAYVPQSPWILTG-NIRENILFGNQYDS---CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVY 772 (1513)
Q Consensus 697 ~ayv~Q~~~l~~~-ti~eNI~fg~~~~~---~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~ 772 (1513)
++||+|++.++.. |++||+.|+..... ++.++.++..++. ........+|||||||||+||||++
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgG~~qrv~la~aL~ 156 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQ-----------LDLDSSAGSLEVADRQIVEILRGLM 156 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCC-----------ccccCChhhCCHHHHHHHHHHHHHH
Confidence 6899999988764 99999998753221 1222223333221 1223445689999999999999999
Q ss_pred cCCCEEEeeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHhcCccHH
Q 000432 773 QDADIYLLDDPFSAVDAHTGTQLFKDCLMGI-LKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLKQNIGFE 850 (1513)
Q Consensus 773 ~~~~illLDep~salD~~~~~~i~~~~~~~~-~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~ 850 (1513)
.+|+++||||||++||+...+.+.+ .+..+ .+|+|+|+|||+++.+.. ||+|++|++|++++.|+++++....
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~---- 231 (510)
T PRK15439 157 RDSRILILDEPTASLTPAETERLFS-RIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTDD---- 231 (510)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHHH----
Confidence 9999999999999999999887765 45544 347999999999998764 9999999999999988876643210
Q ss_pred HHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhhhcCCCchhhhHhhhcccchHHH
Q 000432 851 VLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITEKGGKLVQEEEREKGSIGKEVY 930 (1513)
Q Consensus 851 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~~ 930 (1513)
....
T Consensus 232 -~~~~--------------------------------------------------------------------------- 235 (510)
T PRK15439 232 -IIQA--------------------------------------------------------------------------- 235 (510)
T ss_pred -HHHH---------------------------------------------------------------------------
Confidence 0000
Q ss_pred HHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 931 WSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLVAITGL 1010 (1513)
Q Consensus 931 ~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~ 1010 (1513)
+...... ... ...
T Consensus 236 --~~~~~~~-----------------------------~~~----~~~-------------------------------- 248 (510)
T PRK15439 236 --ITPAARE-----------------------------KSL----SAS-------------------------------- 248 (510)
T ss_pred --HhCcccc-----------------------------ccc----ccc--------------------------------
Confidence 0000000 000 000
Q ss_pred HHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 000432 1011 RTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVIFIPV 1090 (1513)
Q Consensus 1011 ~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~ip~ 1090 (1513)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK15439 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHH
Q 000432 1091 TGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEWLCFR 1170 (1513)
Q Consensus 1091 ~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~ 1170 (1513)
T Consensus 249 -------------------------------------------------------------------------------- 248 (510)
T PRK15439 249 -------------------------------------------------------------------------------- 248 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCC
Q 000432 1171 LNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLVTEEC 1250 (1513)
Q Consensus 1171 l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~~~~ 1250 (1513)
++. .+ ..|...+ .
T Consensus 249 ------------------------------------------------------------~~~-~~-~~~~~~~----~- 261 (510)
T PRK15439 249 ------------------------------------------------------------QKL-WL-ELPGNRR----Q- 261 (510)
T ss_pred ------------------------------------------------------------ccc-cc-ccccccc----c-
Confidence 000 00 0000000 0
Q ss_pred CCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCC
Q 000432 1251 RPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKI 1330 (1513)
Q Consensus 1251 ~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i 1330 (1513)
.+ +..-.|+++|++. .+|+|+||+|++||++||+|++|||||||+++|.|+.+|++|+|.+||.++...
T Consensus 262 -~~---~~~~~l~~~~l~~-------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~ 330 (510)
T PRK15439 262 -QA---AGAPVLTVEDLTG-------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPARGGRIMLNGKEINAL 330 (510)
T ss_pred -cC---CCCceEEEeCCCC-------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEECCCC
Confidence 00 0112589999983 169999999999999999999999999999999999999999999999999887
Q ss_pred ChHH-hhhceEEEcCCC---ccccC-cHhhccCCC-----C---CC--CHHHHHHHHHHcCCcHHHHhhhccccchhccC
Q 000432 1331 GLHD-LRSRLGIIPQDP---TLFDG-TVRGNLDPL-----V---QY--SDKQVWEALDKCQLGDLVRAKEEKLDSTVAEN 1395 (1513)
Q Consensus 1331 ~l~~-LR~~isiVpQdp---~LF~g-TIR~NLdp~-----~---~~--sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~ 1395 (1513)
+... .|++++|+||++ .+|.. |+++|+... . .. .++++.++++..++.. +..+.+
T Consensus 331 ~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~---- 400 (510)
T PRK15439 331 STAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKF------NHAEQA---- 400 (510)
T ss_pred CHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCC------CCccCc----
Confidence 7655 467899999996 36654 999998421 0 00 1123455666665530 123333
Q ss_pred CCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCE
Q 000432 1396 GENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGR 1473 (1513)
Q Consensus 1396 G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~ 1473 (1513)
...||||||||++||||++.+|+||||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|+
T Consensus 401 ~~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~~~d~i~~l~~G~ 480 (510)
T PRK15439 401 ARTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQMADRVLVMHQGE 480 (510)
T ss_pred cccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCE
Confidence 35699999999999999999999999999999999999999999998764 47899999999999977 99999999999
Q ss_pred EeEecChhHHHhc
Q 000432 1474 IAEYDSPTKLLER 1486 (1513)
Q Consensus 1474 IvE~Gtp~eLl~~ 1486 (1513)
++..|+++++..+
T Consensus 481 i~~~~~~~~~~~~ 493 (510)
T PRK15439 481 ISGALTGAAINVD 493 (510)
T ss_pred EEEEEccccCCHH
Confidence 9999999887644
No 75
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=6e-65 Score=638.26 Aligned_cols=436 Identities=19% Similarity=0.324 Sum_probs=333.5
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------- 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------- 696 (1513)
-|+++|++++|+. +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFPG---VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeCC---eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 4899999999963 47999999999999999999999999999999999999999999999872
Q ss_pred EEEEcCCCcccC-ccHHHHHccCCCC-------CchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHH
Q 000432 697 KAYVPQSPWILT-GNIRENILFGNQY-------DSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIA 768 (1513)
Q Consensus 697 ~ayv~Q~~~l~~-~ti~eNI~fg~~~-------~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lA 768 (1513)
++||+|++.++. -|++||+.|+... +.+..++.++ +-++.+. ..........+||||||||++||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~~l~~~~--l~~~~~~~~~~LSgG~~qrv~la 153 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEAD-----KLLARLN--LRFSSDKLVGELSIGEQQMVEIA 153 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHH-----HHHHHcC--CCCCccCchhhCCHHHHHHHHHH
Confidence 699999987775 4999999987432 1111111111 1122221 11112334568999999999999
Q ss_pred HHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHhcC
Q 000432 769 RAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGI-LKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLKQN 846 (1513)
Q Consensus 769 Ral~~~~~illLDep~salD~~~~~~i~~~~~~~~-~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 846 (1513)
||+..+|+++||||||++||+.+.+.+.+ .+..+ .+++|+|+|||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 154 ~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~-- 230 (501)
T PRK10762 154 KVLSFESKVIIMDEPTDALTDTETESLFR-VIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTE-- 230 (501)
T ss_pred HHHhcCCCEEEEeCCcCCCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCH--
Confidence 99999999999999999999999887764 55544 347899999999998765 99999999999987654322100
Q ss_pred ccHHHHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhhhcCCCchhhhHhhhcccc
Q 000432 847 IGFEVLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITEKGGKLVQEEEREKGSIG 926 (1513)
Q Consensus 847 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~ 926 (1513)
+ +
T Consensus 231 -----------------------------------------------------------~-----------~-------- 232 (501)
T PRK10762 231 -----------------------------------------------------------D-----------S-------- 232 (501)
T ss_pred -----------------------------------------------------------H-----------H--------
Confidence 0 0
Q ss_pred hHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 927 KEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLVA 1006 (1513)
Q Consensus 927 ~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~ 1006 (1513)
......+ ..
T Consensus 233 ------~~~~~~~-----------------------------~~------------------------------------ 241 (501)
T PRK10762 233 ------LIEMMVG-----------------------------RK------------------------------------ 241 (501)
T ss_pred ------HHHHhcC-----------------------------CC------------------------------------
Confidence 0000000 00
Q ss_pred HHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000432 1007 ITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVI 1086 (1513)
Q Consensus 1007 ~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv 1086 (1513)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHH
Q 000432 1087 FIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEW 1166 (1513)
Q Consensus 1087 ~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~w 1166 (1513)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc
Q 000432 1167 LCFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLV 1246 (1513)
Q Consensus 1167 l~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~ 1246 (1513)
.. ..++..+
T Consensus 242 ------------------------------------------------------------------~~---~~~~~~~-- 250 (501)
T PRK10762 242 ------------------------------------------------------------------LE---DQYPRLD-- 250 (501)
T ss_pred ------------------------------------------------------------------cc---ccccccc--
Confidence 00 0000000
Q ss_pred ccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCee
Q 000432 1247 TEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVD 1326 (1513)
Q Consensus 1247 ~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvd 1326 (1513)
.+ |..-.|+++|+++ .+|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.+
T Consensus 251 -----~~---~~~~~l~~~~l~~-------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~~g~~ 315 (501)
T PRK10762 251 -----KA---PGEVRLKVDNLSG-------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHE 315 (501)
T ss_pred -----cC---CCCcEEEEeCccc-------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEECCEE
Confidence 00 0112589999984 27999999999999999999999999999999999999999999999999
Q ss_pred CCCCChH-HhhhceEEEcCCC---cccc-CcHhhccCCCC-----C----CC----HHHHHHHHHHcCCcHHHHhhhccc
Q 000432 1327 ITKIGLH-DLRSRLGIIPQDP---TLFD-GTVRGNLDPLV-----Q----YS----DKQVWEALDKCQLGDLVRAKEEKL 1388 (1513)
Q Consensus 1327 I~~i~l~-~LR~~isiVpQdp---~LF~-gTIR~NLdp~~-----~----~s----deei~~aL~~~~l~~~I~~lp~gL 1388 (1513)
+...+.. .+|++++||||+| .+|. -|+++|+.... . .+ ++++.++++.+++.+ +..
T Consensus 316 i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~ 389 (501)
T PRK10762 316 VVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKT------PSM 389 (501)
T ss_pred CCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCC------CCc
Confidence 9876653 4678899999997 3554 69999996310 0 11 234566677666521 112
Q ss_pred cchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEE
Q 000432 1389 DSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLV 1466 (1513)
Q Consensus 1389 dt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrI 1466 (1513)
+.+ ...||||||||++||||++.+|+||+|||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||+|
T Consensus 390 ~~~----~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~v 465 (501)
T PRK10762 390 EQA----IGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDRI 465 (501)
T ss_pred cCc----hhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEE
Confidence 333 45699999999999999999999999999999999999999999998864 47899999999999876 9999
Q ss_pred EEEeCCEEeEecChhHHH
Q 000432 1467 LVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1467 lVLd~G~IvE~Gtp~eLl 1484 (1513)
++|++|++++.|+++++.
T Consensus 466 ~~l~~G~i~~~~~~~~~~ 483 (501)
T PRK10762 466 LVMHEGRISGEFTREQAT 483 (501)
T ss_pred EEEECCEEEEEeccccCC
Confidence 999999999999988753
No 76
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.9e-62 Score=568.73 Aligned_cols=545 Identities=21% Similarity=0.263 Sum_probs=404.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 304 IYKAIFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQL 383 (1513)
Q Consensus 304 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 383 (1513)
..+.+++ +|+.+++++++.++..++....-.+-+.+|....-.........++-+++.=...+..+...+.-...+...
T Consensus 7 ~i~l~~~-~~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~~~~f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~A 85 (573)
T COG4987 7 YLRLYKR-HKFGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGLAYIFNVMLPSAGVRGLAILRTAARYVERLVSHDA 85 (573)
T ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 4444455 677777777776666655544444445555432211110001112223333334455555555555566677
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
Q 000432 384 GLRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFYSNYMFMLPVQISLAI--YILRTNLGLGSLAA 461 (1513)
Q Consensus 384 ~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~~~l--~~L~~~lg~~~l~~ 461 (1513)
..++-+.++-.+|+|....++.-.....+||+.|++..|++.+++.+......|...+.++.++ .+-+..++.+.+.+
T Consensus 86 tfrvL~~lRv~~f~kl~p~sp~~~~r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll~ 165 (573)
T COG4987 86 TFRVLSALRVRLFEKLEPLSPALLLRYRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLLG 165 (573)
T ss_pred HHHHHHHHHHHHHHhhccCChHHHHhcChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 8899999999999999999998888899999999999999999999877666555444333322 22255666666666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 462 LAATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATS 541 (1513)
Q Consensus 462 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~ 541 (1513)
+...+.++.+.....+.-++..++..+.+..--+.+.|.+.|+...+++|.++.+.+.+++.-+.-.+..+|........
T Consensus 166 ~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~ 245 (573)
T COG4987 166 LILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGLS 245 (573)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66555555555666677777777777777777788899999999999999999999888764433333334444444444
Q ss_pred HHHHHHHHHH-HH-HHHHHHHHHhccccc-HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhccccccc
Q 000432 542 AFIFWGSPTF-IS-VVTFGACMLLGIQLT-AGRVLSALATFRMLQDPIFN-LPDLLSNIAQGKVSADRIAAYLQEDEIQR 617 (1513)
Q Consensus 542 ~~~~~~~p~~-v~-~~~f~~~~~~~~~Lt-~~~~ft~l~l~~~L~~pl~~-lp~~i~~~~~a~vs~~RI~~fL~~~e~~~ 617 (1513)
.+...+...+ ++ .+...++..-.|..+ +..+...+..|..+ .++.- .|..+....++..|..|+.+.++++++..
T Consensus 246 ~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~-eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~~ 324 (573)
T COG4987 246 DAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAAL-EAFEPLAPGAFQHLGQVIASARRLNDILDQKPEVT 324 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHH-HHHhhhcchhHHHhhHHHHHHHHHhhhccCCcccC
Confidence 3333222222 11 111122212224444 23332333323333 33332 33777889999999999999998776543
Q ss_pred ccccccCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC--
Q 000432 618 DAVEYVPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG-- 695 (1513)
Q Consensus 618 ~~~~~~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g-- 695 (1513)
...+..+ ..+..++++|++|+|+++ +.++|+|+||++++||++||+|+||||||||+++|.|-++|++|+|..+|
T Consensus 325 ~~~~~~~--~~~~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~ 401 (573)
T COG4987 325 FPDEQTA--TTGQALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVE 401 (573)
T ss_pred CCccccC--CccceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCcC
Confidence 3211122 122379999999999864 56899999999999999999999999999999999999999999999998
Q ss_pred -----------eEEEEcCCCcccCccHHHHHccCCCC-CchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHH
Q 000432 696 -----------TKAYVPQSPWILTGNIRENILFGNQY-DSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQ 763 (1513)
Q Consensus 696 -----------~~ayv~Q~~~l~~~ti~eNI~fg~~~-~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkq 763 (1513)
.+++++|.+.+|++|+|||+.+++|. ++|...++++..+|++-++..|+|++|.+||.|..|||||||
T Consensus 402 ~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~r 481 (573)
T COG4987 402 IASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERR 481 (573)
T ss_pred hhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHHH
Confidence 35889999999999999999999986 557788999999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHH
Q 000432 764 RIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELL 843 (1513)
Q Consensus 764 Ri~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~ 843 (1513)
|++|||++++|++++||||||.+||+.|++++++. +...++|||+|+||||+..++.||+|+||+||+++++|+|.+++
T Consensus 482 RLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~l-l~~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~~~~Ll 560 (573)
T COG4987 482 RLALARALLHDAPLWLLDEPTEGLDPITERQVLAL-LFEHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGTHAELL 560 (573)
T ss_pred HHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHH-HHHHhcCCeEEEEecccccHhhcCEEEEEECCeeeecCCHHhhh
Confidence 99999999999999999999999999999999864 55567899999999999999999999999999999999999999
Q ss_pred hcCccHHHHHH
Q 000432 844 KQNIGFEVLVG 854 (1513)
Q Consensus 844 ~~~~~~~~l~~ 854 (1513)
++++.|.++.+
T Consensus 561 ~~~g~~~~l~q 571 (573)
T COG4987 561 ANNGRYKRLYQ 571 (573)
T ss_pred ccccHHHHHhc
Confidence 99999988753
No 77
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-64 Score=633.12 Aligned_cols=438 Identities=22% Similarity=0.329 Sum_probs=332.2
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC--------------e
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG--------------T 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g--------------~ 696 (1513)
.++++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 4 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFPG---VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEECC---EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 4889999999963 4699999999999999999999999999999999999999999999876 2
Q ss_pred EEEEcCCCcccCc-cHHHHHccCCC------CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHH
Q 000432 697 KAYVPQSPWILTG-NIRENILFGNQ------YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIAR 769 (1513)
Q Consensus 697 ~ayv~Q~~~l~~~-ti~eNI~fg~~------~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lAR 769 (1513)
++||+|++.++.. |++||+.++.. .+....++.+ .+-++.+ |..........+||||||||++|||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lar 153 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEA-----REQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAK 153 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHH-----HHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHH
Confidence 6999999988865 99999998642 1111111111 1112222 1111123455689999999999999
Q ss_pred HHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHhcCc
Q 000432 770 AVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGI-LKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLKQNI 847 (1513)
Q Consensus 770 al~~~~~illLDep~salD~~~~~~i~~~~~~~~-~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~~~~ 847 (1513)
|++.+|+++||||||++||+++.+.+.+ .+..+ .+++|+|+|||+++.+.. ||+|++|++|+++..++..+
T Consensus 154 al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~------ 226 (501)
T PRK11288 154 ALARNARVIAFDEPTSSLSAREIEQLFR-VIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMA------ 226 (501)
T ss_pred HHHhCCCEEEEcCCCCCCCHHHHHHHHH-HHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccc------
Confidence 9999999999999999999999888865 45444 347999999999998765 99999999999875332000
Q ss_pred cHHHHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhhhcCCCchhhhHhhhcccch
Q 000432 848 GFEVLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITEKGGKLVQEEEREKGSIGK 927 (1513)
Q Consensus 848 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~ 927 (1513)
. . . .++
T Consensus 227 ---------------------------------~------------------~---~------------~~~-------- 232 (501)
T PRK11288 227 ---------------------------------Q------------------V---D------------RDQ-------- 232 (501)
T ss_pred ---------------------------------c------------------C---C------------HHH--------
Confidence 0 0 0 000
Q ss_pred HHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 928 EVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLVAI 1007 (1513)
Q Consensus 928 ~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~ 1007 (1513)
+.... ... .
T Consensus 233 -----~~~~~------------------------------~~~-----~------------------------------- 241 (501)
T PRK11288 233 -----LVQAM------------------------------VGR-----E------------------------------- 241 (501)
T ss_pred -----HHHHh------------------------------cCC-----C-------------------------------
Confidence 00000 000 0
Q ss_pred HHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Q 000432 1008 TGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVIF 1087 (1513)
Q Consensus 1008 ~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~ 1087 (1513)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHHH
Q 000432 1088 IPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEWL 1167 (1513)
Q Consensus 1088 ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl 1167 (1513)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcc
Q 000432 1168 CFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLVT 1247 (1513)
Q Consensus 1168 ~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~ 1247 (1513)
.. +. .+.+ +
T Consensus 242 --------------------------~~------------------------------------~~-----~~~~-~--- 250 (501)
T PRK11288 242 --------------------------IG------------------------------------DI-----YGYR-P--- 250 (501)
T ss_pred --------------------------cc------------------------------------cc-----cccc-c---
Confidence 00 00 0000 0
Q ss_pred cCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeC
Q 000432 1248 EECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDI 1327 (1513)
Q Consensus 1248 ~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI 1327 (1513)
. + +....++++|++++ .+++|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++
T Consensus 251 ~---~----~~~~~l~~~~~~~~------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~p~~G~i~~~g~~~ 317 (501)
T PRK11288 251 R---P----LGEVRLRLDGLKGP------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATRRTAGQVYLDGKPI 317 (501)
T ss_pred c---C----CCCcEEEEeccccC------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCcCCCceEEECCEEC
Confidence 0 0 01125889999842 389999999999999999999999999999999999999999999999998
Q ss_pred CCCCh-HHhhhceEEEcCCCc---cc-cCcHhhccCCCC--C-------CC----HHHHHHHHHHcCCcHHHHhhhcccc
Q 000432 1328 TKIGL-HDLRSRLGIIPQDPT---LF-DGTVRGNLDPLV--Q-------YS----DKQVWEALDKCQLGDLVRAKEEKLD 1389 (1513)
Q Consensus 1328 ~~i~l-~~LR~~isiVpQdp~---LF-~gTIR~NLdp~~--~-------~s----deei~~aL~~~~l~~~I~~lp~gLd 1389 (1513)
...+. +..|++++++||+|. +| ..|+.+|+.... . .. ++++.++++..++.+ +..+
T Consensus 318 ~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~ 391 (501)
T PRK11288 318 DIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKT------PSRE 391 (501)
T ss_pred CCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCccc------CCcc
Confidence 75433 456789999999983 55 479999986421 0 01 134566666666521 1133
Q ss_pred chhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEE
Q 000432 1390 STVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVL 1467 (1513)
Q Consensus 1390 t~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIl 1467 (1513)
+++ .+||||||||++||||++.+|+||||||||++||..+.+.+.+.|++.. .+.|||+|+|+++.+.. ||+|+
T Consensus 392 ~~~----~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~d~i~ 467 (501)
T PRK11288 392 QLI----MNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLPEVLGVADRIV 467 (501)
T ss_pred Ccc----ccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHhhCCEEE
Confidence 333 4799999999999999999999999999999999999999999998764 47899999999999976 99999
Q ss_pred EEeCCEEeEecChhHHH
Q 000432 1468 VLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1468 VLd~G~IvE~Gtp~eLl 1484 (1513)
+|++|++++.|++++..
T Consensus 468 ~l~~g~i~~~~~~~~~~ 484 (501)
T PRK11288 468 VMREGRIAGELAREQAT 484 (501)
T ss_pred EEECCEEEEEEccccCC
Confidence 99999999999998765
No 78
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.4e-61 Score=655.53 Aligned_cols=216 Identities=17% Similarity=0.231 Sum_probs=188.3
Q ss_pred CceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhc
Q 000432 1259 VGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSR 1338 (1513)
Q Consensus 1259 ~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~ 1338 (1513)
...|+++|++++|+.+...+|+||||+|++||.+||+|++|||||||+++|.|+.+|++|+|.++|.++.+ +.++.|++
T Consensus 1935 ~~~L~v~nLsK~Y~~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~ 2013 (2272)
T TIGR01257 1935 TDILRLNELTKVYSGTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQN 2013 (2272)
T ss_pred CceEEEEEEEEEECCCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhh
Confidence 34699999999997533469999999999999999999999999999999999999999999999999976 56678899
Q ss_pred eEEEcCCCcccc-CcHhhccCCC---CCCCH----HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHH
Q 000432 1339 LGIIPQDPTLFD-GTVRGNLDPL---VQYSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLG 1410 (1513)
Q Consensus 1339 isiVpQdp~LF~-gTIR~NLdp~---~~~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LA 1410 (1513)
|||+||++.++. -|+||||..+ ...+. +.+.++++.+++.++.++. ...||||||||++||
T Consensus 2014 IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~~dk~-----------~~~LSGGqKqRLslA 2082 (2272)
T TIGR01257 2014 MGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYADRL-----------AGTYSGGNKRKLSTA 2082 (2272)
T ss_pred EEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHhcCC-----------hhhCCHHHHHHHHHH
Confidence 999999999886 4999999642 12222 3355678888887654333 246899999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1411 RTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1411 RALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
|||+.+|+||+|||||++||+.+.+.+.+.|++.. +++|||+++|+++.+.. ||||++|++|++++.|++++|.++
T Consensus 2083 ~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~ 2160 (2272)
T TIGR01257 2083 IALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSK 2160 (2272)
T ss_pred HHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHH
Confidence 99999999999999999999999999999998863 58999999999999986 999999999999999999999765
No 79
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=3.7e-64 Score=631.82 Aligned_cols=441 Identities=22% Similarity=0.328 Sum_probs=332.0
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccC--CCcEEEECC--------------
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQK--MAGTVKISG-------------- 695 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~--~~G~i~~~g-------------- 695 (1513)
++++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 2 l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (500)
T TIGR02633 2 LEMKGIVKTFGG---VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERA 78 (500)
T ss_pred EEEEeEEEEeCC---eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhC
Confidence 688999999953 4799999999999999999999999999999999999986 799999987
Q ss_pred eEEEEcCCCcccCc-cHHHHHccCCCC-------CchHHHHHHHHHhcHHHHhhccCCCCccc-cCCCCCCChHHHHHHH
Q 000432 696 TKAYVPQSPWILTG-NIRENILFGNQY-------DSCKYDRTVEACALVKDFELFASGDLTEI-GERGINMSGGQKQRIQ 766 (1513)
Q Consensus 696 ~~ayv~Q~~~l~~~-ti~eNI~fg~~~-------~~~~~~~v~~~~~l~~d~~~l~~Gd~T~I-ge~g~~LSGGQkqRi~ 766 (1513)
.++||+|++.++.. |++||+.++... +.+..++.+ .+-++.+. ..... .....+||||||||++
T Consensus 79 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~l~~~~--l~~~~~~~~~~~LSgG~~qrv~ 151 (500)
T TIGR02633 79 GIVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRA-----KNLLRELQ--LDADNVTRPVGDYGGGQQQLVE 151 (500)
T ss_pred CEEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHH-----HHHHHHcC--CCCCcccCchhhCCHHHHHHHH
Confidence 27999999987764 999999987532 111111111 11122221 11011 1234579999999999
Q ss_pred HHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000432 767 IARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGI-LKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLK 844 (1513)
Q Consensus 767 lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~-~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~ 844 (1513)
||||++.+|+++||||||++||+.+.+.+.+ .+..+ .+++|+|+|||+++++.. ||+|++|++|+++..|+.+++.
T Consensus 152 iA~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~- 229 (500)
T TIGR02633 152 IAKALNKQARLLILDEPSSSLTEKETEILLD-IIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMS- 229 (500)
T ss_pred HHHHHhhCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCC-
Confidence 9999999999999999999999999888765 55544 357899999999999865 9999999999997654311000
Q ss_pred cCccHHHHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhhhcCCCchhhhHhhhcc
Q 000432 845 QNIGFEVLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITEKGGKLVQEEEREKGS 924 (1513)
Q Consensus 845 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~ 924 (1513)
. . +
T Consensus 230 -----------------------------------------------------------~-~-----------~------ 232 (500)
T TIGR02633 230 -----------------------------------------------------------E-D-----------D------ 232 (500)
T ss_pred -----------------------------------------------------------H-H-----------H------
Confidence 0 0 0
Q ss_pred cchHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 925 IGKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAML 1004 (1513)
Q Consensus 925 v~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~ 1004 (1513)
. +....
T Consensus 233 ----~----~~~~~------------------------------------------------------------------ 238 (500)
T TIGR02633 233 ----I----ITMMV------------------------------------------------------------------ 238 (500)
T ss_pred ----H----HHHHh------------------------------------------------------------------
Confidence 0 00000
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000432 1005 VAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVF 1084 (1513)
Q Consensus 1005 ~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~ 1084 (1513)
T Consensus 239 -------------------------------------------------------------------------------- 238 (500)
T TIGR02633 239 -------------------------------------------------------------------------------- 238 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHH
Q 000432 1085 VIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAM 1164 (1513)
Q Consensus 1085 lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~ 1164 (1513)
+
T Consensus 239 ----------------------------------------------------~--------------------------- 239 (500)
T TIGR02633 239 ----------------------------------------------------G--------------------------- 239 (500)
T ss_pred ----------------------------------------------------C---------------------------
Confidence 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 000432 1165 EWLCFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAP 1244 (1513)
Q Consensus 1165 ~wl~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~ 1244 (1513)
. ... + ..+.+..
T Consensus 240 --------------------------~-~~~------------------------------------~-----~~~~~~~ 251 (500)
T TIGR02633 240 --------------------------R-EIT------------------------------------S-----LYPHEPH 251 (500)
T ss_pred --------------------------c-ccc------------------------------------c-----ccccccc
Confidence 0 000 0 0000000
Q ss_pred CcccCCCCCCCCCCCceEEEEEEEEEEcCC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-CCcEEEE
Q 000432 1245 LVTEECRPPSNWPDVGTISFHNLQIRYAEH-LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-TMGSIII 1322 (1513)
Q Consensus 1245 ~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-~~G~I~I 1322 (1513)
+ +..-.|+++|++++|+.+ ...+|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+
T Consensus 252 -------~----~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~G~i~~ 320 (500)
T TIGR02633 252 -------E----IGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFEGNVFI 320 (500)
T ss_pred -------C----CCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCCeEEEE
Confidence 0 011259999999999432 23599999999999999999999999999999999999995 8999999
Q ss_pred cCeeCCCCCh-HHhhhceEEEcCCC---cccc-CcHhhccCCCC-----C---CC----HHHHHHHHHHcCCcHHHHhhh
Q 000432 1323 DNVDITKIGL-HDLRSRLGIIPQDP---TLFD-GTVRGNLDPLV-----Q---YS----DKQVWEALDKCQLGDLVRAKE 1385 (1513)
Q Consensus 1323 DGvdI~~i~l-~~LR~~isiVpQdp---~LF~-gTIR~NLdp~~-----~---~s----deei~~aL~~~~l~~~I~~lp 1385 (1513)
+|.++...+. ..+|++++++||++ .+|. -|+++|+.... . .. .+++.+++++.++.+
T Consensus 321 ~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------ 394 (500)
T TIGR02633 321 NGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKT------ 394 (500)
T ss_pred CCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccC------
Confidence 9999875443 56788999999997 3665 59999996421 1 11 134566677776531
Q ss_pred ccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-c
Q 000432 1386 EKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-S 1463 (1513)
Q Consensus 1386 ~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~ 1463 (1513)
.-.|.++ ..||||||||++||||++++|++|||||||++||..+.+.+.+.|++.. ++.|||+|+|+++.+.. |
T Consensus 395 ~~~~~~~----~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~~~ 470 (500)
T TIGR02633 395 ASPFLPI----GRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLGLS 470 (500)
T ss_pred CCccCcc----ccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhC
Confidence 0123333 4699999999999999999999999999999999999999999888753 47899999999999976 9
Q ss_pred CEEEEEeCCEEeEecChhHH
Q 000432 1464 DLVLVLSDGRIAEYDSPTKL 1483 (1513)
Q Consensus 1464 DrIlVLd~G~IvE~Gtp~eL 1483 (1513)
|+|++|++|+++..++..++
T Consensus 471 d~v~~l~~G~i~~~~~~~~~ 490 (500)
T TIGR02633 471 DRVLVIGEGKLKGDFVNHAL 490 (500)
T ss_pred CEEEEEECCEEEEEEccccC
Confidence 99999999999987765543
No 80
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.2e-61 Score=664.40 Aligned_cols=472 Identities=18% Similarity=0.192 Sum_probs=364.0
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 383 LGLRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFY-SNYMFMLPVQISLAIYILRTNLGLGSLAA 461 (1513)
Q Consensus 383 ~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~l~~L~~~lg~~~l~~ 461 (1513)
.+.+....+...+|++.++.+..+++++++|+|+|++++|++.+.+.+.. +..+....+.++.++++++....+.+++.
T Consensus 1025 ~~~~~~~~l~~~l~~~ll~~p~~ffd~~~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~~~~~p~~~~~~ 1104 (1560)
T PTZ00243 1025 AMRRGSRNMHRDLLRSVSRGTMSFFDTTPLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVTSASQPFVLVAL 1104 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHcCChhhccCCCccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444557778999999999999999999999999999999999997753 33344444444444443333222222222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 462 LAATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATS 541 (1513)
Q Consensus 462 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~ 541 (1513)
++++++...+...+.+..+..++.....++.-.+.++|.++|+++||.|++|+.|.++..+.-+...+...+......+.
T Consensus 1105 i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~ 1184 (1560)
T PTZ00243 1105 VPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSCSYLENVANRWL 1184 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22222222333344455555555566677777899999999999999999999998887665444333222221121111
Q ss_pred HHHH--HHHHHHHHHHHHHHHH--HhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 000432 542 AFIF--WGSPTFISVVTFGACM--LLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQR 617 (1513)
Q Consensus 542 ~~~~--~~~p~~v~~~~f~~~~--~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~ 617 (1513)
.... ......+.++.++.+. ...+.+++|.+..++.+...+..|+..+...+..+.++.+|++||.++++..+.++
T Consensus 1185 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~~e~ 1264 (1560)
T PTZ00243 1185 GVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERLLYYTDEVPHED 1264 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 1111 1111111222222222 22345789988888888899999999999999999999999999999996322110
Q ss_pred -cc-----------------------c-ccc-----CCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEe
Q 000432 618 -DA-----------------------V-EYV-----PKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICG 667 (1513)
Q Consensus 618 -~~-----------------------~-~~~-----~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG 667 (1513)
.. . ... +.....+.|+|+|++|+|+++ .+++|+|+||+|++||++||||
T Consensus 1265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~-~~~vL~~vsf~I~~GekVaIVG 1343 (1560)
T PTZ00243 1265 MPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREG-LPLVLRGVSFRIAPREKVGIVG 1343 (1560)
T ss_pred cccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCC-CCceeecceEEECCCCEEEEEC
Confidence 00 0 000 111123579999999999753 3569999999999999999999
Q ss_pred cCCCcHHHHHHHHhcCccCCCcEEEECCe-------------EEEEcCCCcccCccHHHHHccCCCCCchHHHHHHHHHh
Q 000432 668 TVGSGKSSLLSCILGEIQKMAGTVKISGT-------------KAYVPQSPWILTGNIRENILFGNQYDSCKYDRTVEACA 734 (1513)
Q Consensus 668 ~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~ayv~Q~~~l~~~ti~eNI~fg~~~~~~~~~~v~~~~~ 734 (1513)
++|||||||+++|+|+++|.+|+|.+||. ++||||+|.||+|||||||..+.++++++..++++.|+
T Consensus 1344 rTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~~~sdeeI~~Al~~a~ 1423 (1560)
T PTZ00243 1344 RTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFLEASSAEVWAALELVG 1423 (1560)
T ss_pred CCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCcccCCCHHHHHHHHHHCC
Confidence 99999999999999999999999999994 49999999999999999999877788899999999999
Q ss_pred cHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcC-CCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEc
Q 000432 735 LVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQD-ADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVT 813 (1513)
Q Consensus 735 l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~-~~illLDep~salD~~~~~~i~~~~~~~~~~~~Tvilvt 813 (1513)
+.+.++.+|+|++|.|||+|.||||||||||+||||++++ |+|+|||||||+||+++++.| ++.++...+++|+|+||
T Consensus 1424 l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~I-q~~L~~~~~~~TvI~IA 1502 (1560)
T PTZ00243 1424 LRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQI-QATVMSAFSAYTVITIA 1502 (1560)
T ss_pred ChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHH-HHHHHHHCCCCEEEEEe
Confidence 9999999999999999999999999999999999999996 899999999999999998777 56788778899999999
Q ss_pred cCCCccccCCEEEEEeCCeEEEecChHHHHhc-CccHHHHHHhh
Q 000432 814 HQVEFLPAADIILVMENGRIAQAGRFEELLKQ-NIGFEVLVGAH 856 (1513)
Q Consensus 814 H~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~-~~~~~~l~~~~ 856 (1513)
||++++..||+|+||++|+|++.|+|+||+++ ++.|.++++..
T Consensus 1503 HRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~~~~f~~l~~~~ 1546 (1560)
T PTZ00243 1503 HRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNRQSIFHSMVEAL 1546 (1560)
T ss_pred ccHHHHHhCCEEEEEECCEEEEECCHHHHHhCCCCHHHHHHHHh
Confidence 99999999999999999999999999999974 78999998654
No 81
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-63 Score=623.49 Aligned_cols=434 Identities=21% Similarity=0.346 Sum_probs=327.4
Q ss_pred EeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------------EEEE
Q 000432 635 VNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT--------------KAYV 700 (1513)
Q Consensus 635 ~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~--------------~ayv 700 (1513)
+|++++|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|. ++||
T Consensus 2 ~nl~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 2 SNISKSFPG---VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CceEEEeCC---EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 578899953 47999999999999999999999999999999999999999999999873 6999
Q ss_pred cCCCcccC-ccHHHHHccCCC-C-----CchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhc
Q 000432 701 PQSPWILT-GNIRENILFGNQ-Y-----DSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQ 773 (1513)
Q Consensus 701 ~Q~~~l~~-~ti~eNI~fg~~-~-----~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~ 773 (1513)
+|++.++. .|++||+.++.. . +.+...+.++ +-++.+ |..........+|||||||||+||||+..
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~~ 151 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTK-----AIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFSY 151 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHHHHH-----HHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHHh
Confidence 99997765 599999998642 1 1111111111 112222 22222344567899999999999999999
Q ss_pred CCCEEEeeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHhcCccHHH
Q 000432 774 DADIYLLDDPFSAVDAHTGTQLFKDCLMGI-LKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLKQNIGFEV 851 (1513)
Q Consensus 774 ~~~illLDep~salD~~~~~~i~~~~~~~~-~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~ 851 (1513)
+|+++||||||++||+.+.+.+.+ .+..+ .+++|+|+|||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 152 ~p~lllLDEPt~~LD~~~~~~l~~-~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~------- 223 (491)
T PRK10982 152 NAKIVIMDEPTSSLTEKEVNHLFT-IIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTM------- 223 (491)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCH-------
Confidence 999999999999999999888865 45544 357899999999998764 99999999999987665322100
Q ss_pred HHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhhhcCCCchhhhHhhhcccchHHHH
Q 000432 852 LVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITEKGGKLVQEEEREKGSIGKEVYW 931 (1513)
Q Consensus 852 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~~~~ 931 (1513)
+ + .
T Consensus 224 ------------------------------------------------------~-----------~-~----------- 226 (491)
T PRK10982 224 ------------------------------------------------------D-----------K-I----------- 226 (491)
T ss_pred ------------------------------------------------------H-----------H-H-----------
Confidence 0 0 0
Q ss_pred HHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 932 SYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLVAITGLR 1011 (1513)
Q Consensus 932 ~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~ 1011 (1513)
..... . ..
T Consensus 227 --~~~~~-------------------------------~-----~~---------------------------------- 234 (491)
T PRK10982 227 --IAMMV-------------------------------G-----RS---------------------------------- 234 (491)
T ss_pred --HHHHh-------------------------------C-----CC----------------------------------
Confidence 00000 0 00
Q ss_pred HHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 000432 1012 TAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVIFIPVT 1091 (1513)
Q Consensus 1012 ~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~ip~~ 1091 (1513)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHH
Q 000432 1092 GICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEWLCFRL 1171 (1513)
Q Consensus 1092 ~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l 1171 (1513)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCC
Q 000432 1172 NLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLVTEECR 1251 (1513)
Q Consensus 1172 ~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~~~~~ 1251 (1513)
. .+ ..+.+. .
T Consensus 235 ----------------------~------------------------------------~~-----~~~~~~----~--- 244 (491)
T PRK10982 235 ----------------------L------------------------------------TQ-----RFPDKE----N--- 244 (491)
T ss_pred ----------------------c------------------------------------cc-----cccccc----C---
Confidence 0 00 000000 0
Q ss_pred CCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC
Q 000432 1252 PPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIG 1331 (1513)
Q Consensus 1252 ~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~ 1331 (1513)
+ +....|+++|++++|+ .+|+|+||+|++||++||+|++|||||||+++|.|+.+|++|+|.+||.++...+
T Consensus 245 ~----~~~~~i~~~~l~~~~~----~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~ 316 (491)
T PRK10982 245 K----PGEVILEVRNLTSLRQ----PSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTITLHGKKINNHN 316 (491)
T ss_pred C----CCCcEEEEeCcccccC----cccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEEECCEECCCCC
Confidence 0 0112599999999852 4899999999999999999999999999999999999999999999999998776
Q ss_pred hHH-hhhceEEEcCCCc---ccc-CcHhhc-----cCCC----CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhc
Q 000432 1332 LHD-LRSRLGIIPQDPT---LFD-GTVRGN-----LDPL----VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVA 1393 (1513)
Q Consensus 1332 l~~-LR~~isiVpQdp~---LF~-gTIR~N-----Ldp~----~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~ 1393 (1513)
... +|+.++|+||++. +|. .|+++| +... +..+ ++++.++++..++.+ +.+|.+
T Consensus 317 ~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~------~~~~~~-- 388 (491)
T PRK10982 317 ANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKT------PGHRTQ-- 388 (491)
T ss_pred HHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccC------CCcccc--
Confidence 544 5778999999963 565 467666 3211 1112 123444555544421 112333
Q ss_pred cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeC
Q 000432 1394 ENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSD 1471 (1513)
Q Consensus 1394 e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~ 1471 (1513)
..+||||||||++||||++++|+||||||||++||+.+.+.+.+.|++.. +++|||+|+|+++.+.. ||||++|++
T Consensus 389 --~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d~v~~l~~ 466 (491)
T PRK10982 389 --IGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITDRILVMSN 466 (491)
T ss_pred --cccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCCEEEEEEC
Confidence 45799999999999999999999999999999999999999999997753 48899999999999876 999999999
Q ss_pred CEEeEecChhHH
Q 000432 1472 GRIAEYDSPTKL 1483 (1513)
Q Consensus 1472 G~IvE~Gtp~eL 1483 (1513)
|+++..+++.++
T Consensus 467 g~i~~~~~~~~~ 478 (491)
T PRK10982 467 GLVAGIVDTKTT 478 (491)
T ss_pred CEEEEEEccccC
Confidence 999988877543
No 82
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=1.6e-63 Score=624.57 Aligned_cols=439 Identities=21% Similarity=0.306 Sum_probs=331.7
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------E
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------K 697 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~ 697 (1513)
-++++|++++|+. +++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i 79 (490)
T PRK10938 3 SLQISQGTFRLSD---TKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLV 79 (490)
T ss_pred eEEEEeEEEEcCC---eeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHh
Confidence 3789999999963 46999999999999999999999999999999999999999999998762 5
Q ss_pred EEEcCCCcc---------cCccHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHH
Q 000432 698 AYVPQSPWI---------LTGNIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIA 768 (1513)
Q Consensus 698 ayv~Q~~~l---------~~~ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lA 768 (1513)
+|++|++-+ +..|++||+.++.. ++++.++.++..++.+. ......+||||||||++||
T Consensus 80 ~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrv~la 147 (490)
T PRK10938 80 SDEWQRNNTDMLSPGEDDTGRTTAEIIQDEVK-DPARCEQLAQQFGITAL-----------LDRRFKYLSTGETRKTLLC 147 (490)
T ss_pred ceeccCcchhhcccchhhccccHHHhcccchh-HHHHHHHHHHHcCCHhh-----------hhCCcccCCHHHHHHHHHH
Confidence 899998743 14589999876521 12334444444444321 2334568999999999999
Q ss_pred HHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHhcC
Q 000432 769 RAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLKQN 846 (1513)
Q Consensus 769 Ral~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 846 (1513)
||+..+|++|||||||++||+.+.+.+.+ .+..+. +++|+|+|||+++.+.. ||+|++|++|+++..|+++++.+..
T Consensus 148 ~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~ 226 (490)
T PRK10938 148 QALMSEPDLLILDEPFDGLDVASRQQLAE-LLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQA 226 (490)
T ss_pred HHHHcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcch
Confidence 99999999999999999999999887765 555443 47899999999998765 9999999999999888766643210
Q ss_pred ccHHHHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhhhcCCCchhhhHhhhcccc
Q 000432 847 IGFEVLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITEKGGKLVQEEEREKGSIG 926 (1513)
Q Consensus 847 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~ 926 (1513)
. ...+ . ..+ .
T Consensus 227 ~-~~~~-----------------------------------------------------~---------~~~-~------ 236 (490)
T PRK10938 227 L-VAQL-----------------------------------------------------A---------HSE-Q------ 236 (490)
T ss_pred h-hhhh-----------------------------------------------------h---------hhh-c------
Confidence 0 0000 0 000 0
Q ss_pred hHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 927 KEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLVA 1006 (1513)
Q Consensus 927 ~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~ 1006 (1513)
. ... .
T Consensus 237 ----------~-------------------------------~~~----~------------------------------ 241 (490)
T PRK10938 237 ----------L-------------------------------EGV----Q------------------------------ 241 (490)
T ss_pred ----------c-------------------------------Ccc----c------------------------------
Confidence 0 000 0
Q ss_pred HHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000432 1007 ITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVI 1086 (1513)
Q Consensus 1007 ~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv 1086 (1513)
T Consensus 242 -------------------------------------------------------------------------------- 241 (490)
T PRK10938 242 -------------------------------------------------------------------------------- 241 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHH
Q 000432 1087 FIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEW 1166 (1513)
Q Consensus 1087 ~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~w 1166 (1513)
T Consensus 242 -------------------------------------------------------------------------------- 241 (490)
T PRK10938 242 -------------------------------------------------------------------------------- 241 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc
Q 000432 1167 LCFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLV 1246 (1513)
Q Consensus 1167 l~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~ 1246 (1513)
.+.. . ++..+.
T Consensus 242 ----------------------~~~~---------------------------------------------~-~~~~~~- 252 (490)
T PRK10938 242 ----------------------LPEP---------------------------------------------D-EPSARH- 252 (490)
T ss_pred ----------------------cCcc---------------------------------------------c-cccccc-
Confidence 0000 0 000000
Q ss_pred ccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-CCcEEEEcCe
Q 000432 1247 TEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-TMGSIIIDNV 1325 (1513)
Q Consensus 1247 ~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-~~G~I~IDGv 1325 (1513)
..+ .....|+++|++++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+.+| ++|+|.+||.
T Consensus 253 ----~~~---~~~~~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~G~~~~~~~G~i~~~g~ 323 (490)
T PRK10938 253 ----ALP---ANEPRIVLNNGVVSYNDR--PILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLITGDHPQGYSNDLTLFGR 323 (490)
T ss_pred ----ccC---CCCceEEEeceEEEECCe--eEEeeceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCcccCCeEEEecc
Confidence 000 011259999999999643 499999999999999999999999999999999998875 6999999998
Q ss_pred eCCC-CChHHhhhceEEEcCCCcccc---CcHhhccCCC--C------CCC---HHHHHHHHHHcCCcH-HHHhhhcccc
Q 000432 1326 DITK-IGLHDLRSRLGIIPQDPTLFD---GTVRGNLDPL--V------QYS---DKQVWEALDKCQLGD-LVRAKEEKLD 1389 (1513)
Q Consensus 1326 dI~~-i~l~~LR~~isiVpQdp~LF~---gTIR~NLdp~--~------~~s---deei~~aL~~~~l~~-~I~~lp~gLd 1389 (1513)
++.. ......|++++++||++.++. .|+++|+.+. . ... ++++.++++.+++.+ . .+
T Consensus 324 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~ 396 (490)
T PRK10938 324 RRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLDILGIDKRT-------AD 396 (490)
T ss_pred cCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCchhh-------cc
Confidence 7632 234457889999999987643 4777776421 0 111 245677888887754 3 22
Q ss_pred chhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC-C-cEEEEeccChhhHhh--cCE
Q 000432 1390 STVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK-D-RTVVTIAHRIHTVID--SDL 1465 (1513)
Q Consensus 1390 t~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~-~-~TvI~IAHRl~ti~~--~Dr 1465 (1513)
.++ ..||||||||++|||||+++|+||+|||||++||+++.+.+.+.|++..+ + .|||+|+|+++.+.. ||+
T Consensus 397 ~~~----~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tviivsHd~~~~~~~~~d~ 472 (490)
T PRK10938 397 APF----HSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQLLFVSHHAEDAPACITHR 472 (490)
T ss_pred Cch----hhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEEEEEecchhhhhhhhhee
Confidence 333 46999999999999999999999999999999999999999999988643 3 479999999999975 799
Q ss_pred EEEEeCCEEeEecC
Q 000432 1466 VLVLSDGRIAEYDS 1479 (1513)
Q Consensus 1466 IlVLd~G~IvE~Gt 1479 (1513)
|++|++|+|++.-+
T Consensus 473 v~~l~~G~i~~~~~ 486 (490)
T PRK10938 473 LEFVPDGDIYRYVQ 486 (490)
T ss_pred EEEecCCceEEeec
Confidence 99999999988643
No 83
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=5.5e-62 Score=617.48 Aligned_cols=480 Identities=23% Similarity=0.314 Sum_probs=335.5
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC--eEEEEcCCCcccC
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG--TKAYVPQSPWILT 708 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g--~~ayv~Q~~~l~~ 708 (1513)
-++++|++++|++ ++++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.+++ .++||+|+|+++.
T Consensus 4 ~i~~~nls~~~~~--~~~il~~is~~i~~Ge~~~liG~NGsGKSTLl~~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~ 81 (552)
T TIGR03719 4 IYTMNRVSKVVPP--KKEILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFNGEARPAPGIKVGYLPQEPQLDP 81 (552)
T ss_pred EEEEeeEEEecCC--CCeeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEeccCCCCC
Confidence 5889999999962 24799999999999999999999999999999999999999999999874 6899999999885
Q ss_pred -ccHHHHHccCCCC------------------Cc---------hHHHHHHHHHhcHH-------HHhhccCCCCccccCC
Q 000432 709 -GNIRENILFGNQY------------------DS---------CKYDRTVEACALVK-------DFELFASGDLTEIGER 753 (1513)
Q Consensus 709 -~ti~eNI~fg~~~------------------~~---------~~~~~v~~~~~l~~-------d~~~l~~Gd~T~Ige~ 753 (1513)
.|++|||.++... ++ .++.++++.++..+ -++.+ |.. .....
T Consensus 82 ~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~-~~~~~ 158 (552)
T TIGR03719 82 TKTVRENVEEGVAEIKDALDRFNEISAKFAEPDADMDALLAEQAELQEIIDAADAWDLDRKLEIAMDAL--RCP-PWDAD 158 (552)
T ss_pred CCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCcchhHHHHHHHHhhC--CCC-cccCc
Confidence 5999999876310 01 11223333333211 11111 211 12445
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCe
Q 000432 754 GINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGR 832 (1513)
Q Consensus 754 g~~LSGGQkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~ 832 (1513)
..+|||||||||+||||++.+|+++||||||++||+++.+.+.+ .+... ++|+|+|||+++++.. ||+|++|++|+
T Consensus 159 ~~~LSgGqkqrv~la~al~~~p~lLLLDEPt~~LD~~~~~~l~~-~L~~~--~~tvIiisHd~~~~~~~~d~v~~l~~g~ 235 (552)
T TIGR03719 159 VTKLSGGERRRVALCRLLLSKPDMLLLDEPTNHLDAESVAWLEQ-HLQEY--PGTVVAVTHDRYFLDNVAGWILELDRGR 235 (552)
T ss_pred hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCChHHHHHHHH-HHHhC--CCeEEEEeCCHHHHHhhcCeEEEEECCE
Confidence 67899999999999999999999999999999999999877754 55543 3699999999999876 89999999999
Q ss_pred EE-EecChHHHHhcCccHHHHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhhhcC
Q 000432 833 IA-QAGRFEELLKQNIGFEVLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITEKG 911 (1513)
Q Consensus 833 i~-~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1513)
++ ..|+++++.+.... ... . .
T Consensus 236 i~~~~g~~~~~~~~~~~---~~~----~----------------------------------------------~----- 257 (552)
T TIGR03719 236 GIPWEGNYSSWLEQKEK---RLE----Q----------------------------------------------E----- 257 (552)
T ss_pred EEEecCCHHHHHHHHHH---HHH----H----------------------------------------------H-----
Confidence 75 78998887642100 000 0 0
Q ss_pred CCchhhhHhhhcccchHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHH
Q 000432 912 GKLVQEEEREKGSIGKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLT 991 (1513)
Q Consensus 912 ~~~~~~e~~~~g~v~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~ 991 (1513)
..+.++. ...+..... |+.
T Consensus 258 ---~~~~~~~---------~~~~~~~~~-----------------------~~~-------------------------- 276 (552)
T TIGR03719 258 ---EKEESAR---------QKALKRELE-----------------------WVR-------------------------- 276 (552)
T ss_pred ---HHHHHHH---------HHHHHHHHH-----------------------HHH--------------------------
Confidence 0000000 000000000 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHH
Q 000432 992 VGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILG 1071 (1513)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~ 1071 (1513)
T Consensus 277 -------------------------------------------------------------------------------- 276 (552)
T TIGR03719 277 -------------------------------------------------------------------------------- 276 (552)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHH
Q 000432 1072 TIGVMSQVAWQVFVIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLID 1151 (1513)
Q Consensus 1072 ~l~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d 1151 (1513)
+. ...++. + .
T Consensus 277 ---------------------------~~--~~~~~~-------~----------------------~------------ 286 (552)
T TIGR03719 277 ---------------------------SS--PKARQA-------K----------------------S------------ 286 (552)
T ss_pred ---------------------------hh--hhhHHH-------H----------------------H------------
Confidence 00 000000 0 0
Q ss_pred hhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1152 NHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVE 1231 (1513)
Q Consensus 1152 ~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sve 1231 (1513)
+......+
T Consensus 287 ------------------------------------------------------------------------~~~~~~~~ 294 (552)
T TIGR03719 287 ------------------------------------------------------------------------KARLARYE 294 (552)
T ss_pred ------------------------------------------------------------------------HHHHHHHH
Confidence 00000001
Q ss_pred HHHHhcCCCCCCCCcccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhc
Q 000432 1232 RILQYSNLPSEAPLVTEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFR 1311 (1513)
Q Consensus 1232 Ri~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~r 1311 (1513)
++.+. .++..+.......+...-+.+..|+++|++++|++. .+|+|+||+|++||++||+|++|||||||+++|.|
T Consensus 295 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G 370 (552)
T TIGR03719 295 ELLSQ--EFQKRNETAEIYIPPGPRLGDKVIEAENLSKGFGDK--LLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITG 370 (552)
T ss_pred hhhhh--cccccCCCceeecCCCCCCCCeEEEEeeEEEEECCe--eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcC
Confidence 11110 000000000000000000112369999999999643 59999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCc-ccc-CcHhhccCCCC---CC--CHHHHHHHHHHcCCcHHHHhh
Q 000432 1312 IVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPT-LFD-GTVRGNLDPLV---QY--SDKQVWEALDKCQLGDLVRAK 1384 (1513)
Q Consensus 1312 l~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~-LF~-gTIR~NLdp~~---~~--sdeei~~aL~~~~l~~~I~~l 1384 (1513)
+.+|++|+|.+++ + .+++|+||++. ++. -|+++|+.... .. .+.+..++++..++.+..
T Consensus 371 ~~~p~~G~i~~~~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~--- 436 (552)
T TIGR03719 371 QEQPDSGTIKIGE-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFNFKGSD--- 436 (552)
T ss_pred CCCCCCeEEEECC-c----------eEEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHHHHHHhCCCChhH---
Confidence 9999999999965 2 16999999973 664 59999996421 11 133455677777664211
Q ss_pred hccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-c
Q 000432 1385 EEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-S 1463 (1513)
Q Consensus 1385 p~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~ 1463 (1513)
.+.+ ...||||||||++||||++.+|+||||||||++||+.+...+.+.|++. . .|||+|+|+++.+.. |
T Consensus 437 ---~~~~----~~~LSgGe~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~~viivsHd~~~~~~~~ 507 (552)
T TIGR03719 437 ---QQKK----VGQLSGGERNRVHLAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEF-A-GCAVVISHDRWFLDRIA 507 (552)
T ss_pred ---hcCc----hhhCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHC-C-CeEEEEeCCHHHHHHhC
Confidence 1222 3569999999999999999999999999999999999999999999876 3 499999999999876 9
Q ss_pred CEEEEEeC-CEEeEe-cChhHHHhc
Q 000432 1464 DLVLVLSD-GRIAEY-DSPTKLLER 1486 (1513)
Q Consensus 1464 DrIlVLd~-G~IvE~-Gtp~eLl~~ 1486 (1513)
|+|++|++ |+++++ |++++..+.
T Consensus 508 d~i~~l~~~~~~~~~~g~~~~~~~~ 532 (552)
T TIGR03719 508 THILAFEGDSHVEWFEGNYSEYEED 532 (552)
T ss_pred CEEEEEECCCeEEEeCCCHHHHHHH
Confidence 99999997 688754 777776554
No 84
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=5.4e-62 Score=617.51 Aligned_cols=481 Identities=23% Similarity=0.318 Sum_probs=335.7
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC--eEEEEcCCCcccC
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG--TKAYVPQSPWILT 708 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g--~~ayv~Q~~~l~~ 708 (1513)
-|+++|++++|+. ++++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.+++ .++||+|+|++++
T Consensus 6 ~l~i~~l~~~y~~--~~~il~~vs~~i~~Ge~~~iiG~NGsGKSTLlk~i~G~~~p~~G~i~~~~~~~i~~v~Q~~~~~~ 83 (556)
T PRK11819 6 IYTMNRVSKVVPP--KKQILKDISLSFFPGAKIGVLGLNGAGKSTLLRIMAGVDKEFEGEARPAPGIKVGYLPQEPQLDP 83 (556)
T ss_pred EEEEeeEEEEeCC--CCeeeeCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEecCCCEEEEEecCCCCCC
Confidence 5899999999962 25799999999999999999999999999999999999999999999864 6899999999986
Q ss_pred c-cHHHHHccCCC-C--------------C-c-h-------HHHHHHHHHh----------cHHHHhhccCCCCccccCC
Q 000432 709 G-NIRENILFGNQ-Y--------------D-S-C-------KYDRTVEACA----------LVKDFELFASGDLTEIGER 753 (1513)
Q Consensus 709 ~-ti~eNI~fg~~-~--------------~-~-~-------~~~~v~~~~~----------l~~d~~~l~~Gd~T~Ige~ 753 (1513)
. |++||+.++.. + . . + ++.++.+.+. ..+-++.+ |.. ....+
T Consensus 84 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~-~~~~~ 160 (556)
T PRK11819 84 EKTVRENVEEGVAEVKAALDRFNEIYAAYAEPDADFDALAAEQGELQEIIDAADAWDLDSQLEIAMDAL--RCP-PWDAK 160 (556)
T ss_pred CCcHHHHHHHhhHHHHHHHHHHHHHHHHhccCchhhHHHHHHHHHHHHHHHhcCccchHHHHHHHHHhC--CCC-cccCc
Confidence 5 99999987631 0 0 0 0 0111111110 00111111 111 12345
Q ss_pred CCCCChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCe
Q 000432 754 GINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGR 832 (1513)
Q Consensus 754 g~~LSGGQkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~ 832 (1513)
..+|||||||||+||||++++|+++|||||||+||+.+.+.+. +++... ++|+|+|||+++++.. ||+|++|++|+
T Consensus 161 ~~~LSgGqkqrv~la~al~~~p~vlLLDEPt~~LD~~~~~~l~-~~L~~~--~~tviiisHd~~~~~~~~d~i~~l~~g~ 237 (556)
T PRK11819 161 VTKLSGGERRRVALCRLLLEKPDMLLLDEPTNHLDAESVAWLE-QFLHDY--PGTVVAVTHDRYFLDNVAGWILELDRGR 237 (556)
T ss_pred hhhcCHHHHHHHHHHHHHhCCCCEEEEcCCCCcCChHHHHHHH-HHHHhC--CCeEEEEeCCHHHHHhhcCeEEEEeCCE
Confidence 6689999999999999999999999999999999999987775 466554 3599999999999875 99999999999
Q ss_pred EE-EecChHHHHhcCccHHHHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhhhcC
Q 000432 833 IA-QAGRFEELLKQNIGFEVLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITEKG 911 (1513)
Q Consensus 833 i~-~~g~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1513)
++ +.|+++++.+.... .... . . .
T Consensus 238 i~~~~g~~~~~~~~~~~-------~~~~---------------------~----------------------~-~----- 261 (556)
T PRK11819 238 GIPWEGNYSSWLEQKAK-------RLAQ---------------------E----------------------E-K----- 261 (556)
T ss_pred EEEecCCHHHHHHHHHH-------HHHH---------------------H----------------------H-H-----
Confidence 86 78998887543100 0000 0 0 0
Q ss_pred CCchhhhHhhhcccchHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHH
Q 000432 912 GKLVQEEEREKGSIGKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLT 991 (1513)
Q Consensus 912 ~~~~~~e~~~~g~v~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~ 991 (1513)
+.++..+ .++.... |+
T Consensus 262 ----~~~~~~~----------~~~~~~~-----------------------~~--------------------------- 277 (556)
T PRK11819 262 ----QEAARQK----------ALKRELE-----------------------WV--------------------------- 277 (556)
T ss_pred ----HHHHHHH----------HHHHHHH-----------------------HH---------------------------
Confidence 0000000 0000000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHH
Q 000432 992 VGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILG 1071 (1513)
Q Consensus 992 ~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~ 1071 (1513)
T Consensus 278 -------------------------------------------------------------------------------- 277 (556)
T PRK11819 278 -------------------------------------------------------------------------------- 277 (556)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHH
Q 000432 1072 TIGVMSQVAWQVFVIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLID 1151 (1513)
Q Consensus 1072 ~l~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d 1151 (1513)
.+. ...+.. .
T Consensus 278 --------------------------~~~--~~~~~~-~----------------------------------------- 287 (556)
T PRK11819 278 --------------------------RQS--PKARQA-K----------------------------------------- 287 (556)
T ss_pred --------------------------HHh--hhhhHH-H-----------------------------------------
Confidence 000 000000 0
Q ss_pred hhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1152 NHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVE 1231 (1513)
Q Consensus 1152 ~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sve 1231 (1513)
.+......+
T Consensus 288 -----------------------------------------------------------------------~~~~~~~~~ 296 (556)
T PRK11819 288 -----------------------------------------------------------------------SKARLARYE 296 (556)
T ss_pred -----------------------------------------------------------------------HHHHHHHHH
Confidence 000000001
Q ss_pred HHHHhcCCCCCCCCcccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhc
Q 000432 1232 RILQYSNLPSEAPLVTEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFR 1311 (1513)
Q Consensus 1232 Ri~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~r 1311 (1513)
|..+. .+.+.+.......++...+.+..|+++||+++|++. .+|+|+||+|++||++||+|++|||||||+++|.|
T Consensus 297 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G 372 (556)
T PRK11819 297 ELLSE--EYQKRNETNEIFIPPGPRLGDKVIEAENLSKSFGDR--LLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITG 372 (556)
T ss_pred Hhhcc--cccccCCCceeecCCCCCCCCeEEEEEeEEEEECCe--eeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhC
Confidence 11110 001100000000011111123469999999999643 59999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCC-cccc-CcHhhccCCCC---C--CCHHHHHHHHHHcCCcHHHHhh
Q 000432 1312 IVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDP-TLFD-GTVRGNLDPLV---Q--YSDKQVWEALDKCQLGDLVRAK 1384 (1513)
Q Consensus 1312 l~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp-~LF~-gTIR~NLdp~~---~--~sdeei~~aL~~~~l~~~I~~l 1384 (1513)
+++|++|+|.+++ + .+++|+||++ .++. -|+++|+.... . ..+++..++++..++.+.
T Consensus 373 ~~~p~~G~i~~~~-~----------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~---- 437 (556)
T PRK11819 373 QEQPDSGTIKIGE-T----------VKLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKGG---- 437 (556)
T ss_pred CCCCCCeEEEECC-c----------eEEEEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCChh----
Confidence 9999999999964 2 1699999997 5665 49999996421 1 123445567777776421
Q ss_pred hccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-c
Q 000432 1385 EEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-S 1463 (1513)
Q Consensus 1385 p~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~ 1463 (1513)
..+.. ...||||||||++||||++.+|++|||||||++||+.+...+.+.|++. + .|+|+|||+++.+.. |
T Consensus 438 --~~~~~----~~~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~ 509 (556)
T PRK11819 438 --DQQKK----VGVLSGGERNRLHLAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIA 509 (556)
T ss_pred --HhcCc----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhC
Confidence 12233 3469999999999999999999999999999999999999999999875 4 499999999999876 9
Q ss_pred CEEEEEeC-CEEeE-ecChhHHHhcC
Q 000432 1464 DLVLVLSD-GRIAE-YDSPTKLLERE 1487 (1513)
Q Consensus 1464 DrIlVLd~-G~IvE-~Gtp~eLl~~~ 1487 (1513)
|+|++|++ |++.+ .|+++++++++
T Consensus 510 d~i~~l~~~g~~~~~~g~~~~~~~~~ 535 (556)
T PRK11819 510 THILAFEGDSQVEWFEGNFQEYEEDK 535 (556)
T ss_pred CEEEEEECCCeEEEecCCHHHHHHHH
Confidence 99999996 88875 68888887663
No 85
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=5e-62 Score=563.24 Aligned_cols=526 Identities=21% Similarity=0.215 Sum_probs=395.1
Q ss_pred HHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcC
Q 000432 948 LAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRA 1027 (1513)
Q Consensus 948 l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~ 1027 (1513)
+++.+..++.+..+.++--.-|.........+......+-+++.++..++..+|+..+.+.|.+.-.++....|...+++
T Consensus 30 lfS~~INiL~L~~~lyMLQVyDRVL~S~s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~~~ 109 (580)
T COG4618 30 LFSAVINLLALTGPLYMLQVYDRVLPSRSVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASFSA 109 (580)
T ss_pred HHHHHHHHHHHhhhHHHHHHHhhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHhh
Confidence 33444555666666555433333321111112222223334445667888999999999999999999999999999888
Q ss_pred CcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1028 PMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVIFIPVTGICIWYQQYYIPTARE 1107 (1513)
Q Consensus 1028 p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~~~r~ 1107 (1513)
|..--......+.+ +|.+++..++...-...+...--+-..+++++.+.|++.++.+.-.++.+.+...--...++
T Consensus 110 ~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~~t~~ 185 (580)
T COG4618 110 PLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNERATRK 185 (580)
T ss_pred HHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 77644333333333 57888888877644444444333445566777788888776544333322222222222233
Q ss_pred HHHHHHHHhchHHHHHHHHHchHHHHHHhchHHH----HHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1108 LARLAEIQRAPILHHFAESLAGAATIHAFDQEDR----FTNANLSLIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSL 1183 (1513)
Q Consensus 1108 l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~----f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~ 1183 (1513)
-.+..++....-.++..-+..+.++|+|.|...+ +.+.+.+.++.+.++.........---..-.++.+.+....+
T Consensus 186 p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iLg~GA 265 (580)
T COG4618 186 PLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVLGLGA 265 (580)
T ss_pred cHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcce
Confidence 3333444555667788889999999999998764 455555555555554443332222111111122222223232
Q ss_pred HHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCceEE
Q 000432 1184 VVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLVTEECRPPSNWPDVGTIS 1263 (1513)
Q Consensus 1184 ~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~ 1263 (1513)
.++..|.+++|.+...--..-....++-..+..|-++-....|..|+.+.++..++..... +.| ..+|.+.
T Consensus 266 ---~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~m---~LP---~P~g~L~ 336 (580)
T COG4618 266 ---WLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAERM---PLP---APQGALS 336 (580)
T ss_pred ---eeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCC---CCC---CCCceee
Confidence 2345889999887665555556667788899999999999999999999997655433211 111 1268999
Q ss_pred EEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEc
Q 000432 1264 FHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIP 1343 (1513)
Q Consensus 1264 f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVp 1343 (1513)
++++++.=++...++|+||||+++|||-+|||||||||||||.++|.|...|.+|.|.+||-|+++.+.++|=++|||.|
T Consensus 337 Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGYLP 416 (580)
T COG4618 337 VERLTAAPPGQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGYLP 416 (580)
T ss_pred EeeeeecCCCCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCcCc
Confidence 99999976666678999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCcHhhccCCCC-CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000432 1344 QDPTLFDGTVRGNLDPLV-QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVL 1422 (1513)
Q Consensus 1344 Qdp~LF~gTIR~NLdp~~-~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiL 1422 (1513)
||..||+|||+|||.-++ +.++|.|.+|.+.++.||.|.++|+||||.|||+|..|||||||||+||||++.+|+++||
T Consensus 417 QdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lvVL 496 (580)
T COG4618 417 QDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLVVL 496 (580)
T ss_pred ccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEEEe
Confidence 999999999999997554 8889999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhc
Q 000432 1423 DEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1423 DEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
|||-||||.+-|+.+.++|.+.. +++|+|+||||.+.+..+|+|+||++|++..||+-+|.+++
T Consensus 497 DEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 497 DEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred cCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 99999999999999999987654 69999999999999999999999999999999999999875
No 86
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=7.1e-62 Score=545.34 Aligned_cols=457 Identities=25% Similarity=0.397 Sum_probs=344.5
Q ss_pred eEEEEeEEEEeCC-CCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccC-----CCcEEEECC---------
Q 000432 631 EVEVVNGKFSWNP-ESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQK-----MAGTVKISG--------- 695 (1513)
Q Consensus 631 ~I~~~~~sf~~~~-~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~-----~~G~i~~~g--------- 695 (1513)
-++++|.+.++.. +....++++|||+|++||.+|+||+||||||--.++++|+++. -+|+|..+|
T Consensus 6 lL~v~nLsV~f~~~~~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~ 85 (534)
T COG4172 6 LLSIRNLSVAFHQEGGTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASER 85 (534)
T ss_pred ceeeeccEEEEecCCcceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHH
Confidence 4667777766643 2346799999999999999999999999999999999999975 468999877
Q ss_pred --------eEEEEcCCCccc-Cc--cH----HHHHccCCCCCchHH-HHHHHHHhcHHHHhhccCCCCccccCCCCCCCh
Q 000432 696 --------TKAYVPQSPWIL-TG--NI----RENILFGNQYDSCKY-DRTVEACALVKDFELFASGDLTEIGERGINMSG 759 (1513)
Q Consensus 696 --------~~ayv~Q~~~l~-~~--ti----~eNI~fg~~~~~~~~-~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSG 759 (1513)
+|++++|+|.-- |- || .|-|...+....+.. .++++...+. .+|+- .-.+..-...|||
T Consensus 86 ~lr~iRG~~I~MIFQEPMtSLNPl~tIg~Qi~E~l~~Hrg~~~~~Ar~r~lelL~~V----gI~~p-~~rl~~yPHeLSG 160 (534)
T COG4172 86 QLRGVRGNKIGMIFQEPMTSLNPLHTIGKQLAEVLRLHRGLSRAAARARALELLELV----GIPEP-EKRLDAYPHELSG 160 (534)
T ss_pred HHhhhcccceEEEecccccccCcHhHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHc----CCCch-hhhhhhCCcccCc
Confidence 479999999432 21 44 444545444433222 1222211110 11110 1123344678999
Q ss_pred HHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEe
Q 000432 760 GQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQA 836 (1513)
Q Consensus 760 GQkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~ 836 (1513)
||||||.||.||..+||+||-||||.|||..+..+|.+ +++.+. .|-.+++|||++..... ||+|+||.+|+++|.
T Consensus 161 GqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~-Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~ivE~ 239 (534)
T COG4172 161 GQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILD-LLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIVET 239 (534)
T ss_pred chhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHH-HHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEeec
Confidence 99999999999999999999999999999999999975 565543 37899999999999876 999999999999999
Q ss_pred cChHHHHhcCc-cHHHHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhhhcCCCch
Q 000432 837 GRFEELLKQNI-GFEVLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITEKGGKLV 915 (1513)
Q Consensus 837 g~~~~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 915 (1513)
|+.+++.+... .|....-
T Consensus 240 ~~t~~lF~~PqHpYTr~Ll------------------------------------------------------------- 258 (534)
T COG4172 240 GTTETLFAAPQHPYTRKLL------------------------------------------------------------- 258 (534)
T ss_pred CcHHHHhhCCCChHHHHHH-------------------------------------------------------------
Confidence 98777654321 0000000
Q ss_pred hhhHhhhcccchHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHH
Q 000432 916 QEEEREKGSIGKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSS 995 (1513)
Q Consensus 916 ~~e~~~~g~v~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~ 995 (1513)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 996 LCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGV 1075 (1513)
Q Consensus 996 ~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v 1075 (1513)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhch
Q 000432 1076 MSQVAWQVFVIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSR 1155 (1513)
Q Consensus 1076 ~~~~~~~l~lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~ 1155 (1513)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1156 PWFHNVSAMEWLCFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQ 1235 (1513)
Q Consensus 1156 ~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e 1235 (1513)
T Consensus 259 -------------------------------------------------------------------------------- 258 (534)
T COG4172 259 -------------------------------------------------------------------------------- 258 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCCCCCCCCcccCCCCCCCCCCCceEEEEEEEEEEcCC---------CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHH
Q 000432 1236 YSNLPSEAPLVTEECRPPSNWPDVGTISFHNLQIRYAEH---------LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLI 1306 (1513)
Q Consensus 1236 ~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~---------~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl 1306 (1513)
+ .|+. +..+|..-...--++.+||.+.|+-. .-.+.+||||+.++||.+||||+||||||||-
T Consensus 259 --~--aeP~----g~~~p~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG 330 (534)
T COG4172 259 --A--AEPS----GDPPPLPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLG 330 (534)
T ss_pred --h--cCCC----CCCCCCCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCcchHH
Confidence 0 0000 00000000112246666666666321 12378999999999999999999999999999
Q ss_pred HHHhccCCCCCcEEEEcCeeCCCCChHH---hhhceEEEcCCCc--cc-cCcHhhccC----CCC-CC----CHHHHHHH
Q 000432 1307 QAIFRIVEPTMGSIIIDNVDITKIGLHD---LRSRLGIIPQDPT--LF-DGTVRGNLD----PLV-QY----SDKQVWEA 1371 (1513)
Q Consensus 1307 ~lL~rl~ep~~G~I~IDGvdI~~i~l~~---LR~~isiVpQdp~--LF-~gTIR~NLd----p~~-~~----sdeei~~a 1371 (1513)
++|+|+.+++ |+|..+|.||...+.++ +|+++-+|+|||+ |= ..||-+-|. -.+ .. .|+.+.+|
T Consensus 331 ~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~a 409 (534)
T COG4172 331 LALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEA 409 (534)
T ss_pred HHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHH
Confidence 9999999876 99999999999988777 6899999999997 21 124444332 111 12 35678999
Q ss_pred HHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcE
Q 000432 1372 LDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRT 1449 (1513)
Q Consensus 1372 L~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~T 1449 (1513)
|+.+||+.-...- | ...+||||||||+||||+.-+|++++||||||+||..-.++|.+.+++.- .+-+
T Consensus 410 L~EVGLDp~~r~R---Y-------PhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~Ls 479 (534)
T COG4172 410 LEEVGLDPATRNR---Y-------PHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLS 479 (534)
T ss_pred HHHcCCChhHhhc---C-------CcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCe
Confidence 9999998754421 1 24589999999999999999999999999999999999999999998764 3679
Q ss_pred EEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCChHHHH
Q 000432 1450 VVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLEREDSFFSQ 1493 (1513)
Q Consensus 1450 vI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~ 1493 (1513)
-++|+|+|..++. ||+|+||.+|+|||+|.-+++.+++...|-+
T Consensus 480 YLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~P~~~YT~ 524 (534)
T COG4172 480 YLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFANPQHEYTR 524 (534)
T ss_pred EEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcCCCcHHHH
Confidence 9999999999987 9999999999999999999999998877754
No 87
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-60 Score=608.83 Aligned_cols=199 Identities=20% Similarity=0.325 Sum_probs=168.5
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++||+++|++ ..+|+|+||+|++||++||+||+|||||||+++|+|+++|++|+|.+++. .+++
T Consensus 312 ~l~~~~l~~~y~~--~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~ig 378 (638)
T PRK10636 312 LLKMEKVSAGYGD--RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKLG 378 (638)
T ss_pred eEEEEeeEEEeCC--eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEEE
Confidence 6999999999964 35999999999999999999999999999999999999999999999741 2699
Q ss_pred EEcCCC--cccc-CcHhhccCC-CCCCCHHHHHHHHHHcCCcH-HHHhhhccccchhccCCCCCChhHHHHHHHHHHHcc
Q 000432 1341 IIPQDP--TLFD-GTVRGNLDP-LVQYSDKQVWEALDKCQLGD-LVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLK 1415 (1513)
Q Consensus 1341 iVpQdp--~LF~-gTIR~NLdp-~~~~sdeei~~aL~~~~l~~-~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr 1415 (1513)
|+||++ .++. .|+.+|+.. .....++++.+.|+..++.+ .. +.++ ..||||||||++||||+++
T Consensus 379 y~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~~~~-------~~~~----~~LSgGekqRl~La~~l~~ 447 (638)
T PRK10636 379 YFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQGDKV-------TEET----RRFSGGEKARLVLALIVWQ 447 (638)
T ss_pred EecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCChhHh-------cCch----hhCCHHHHHHHHHHHHHhc
Confidence 999985 3443 378887632 12334567788888888742 22 2333 4699999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEe-EecChhHHHh
Q 000432 1416 KSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIA-EYDSPTKLLE 1485 (1513)
Q Consensus 1416 ~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~Iv-E~Gtp~eLl~ 1485 (1513)
+|+||||||||++||..+...+.+.|++. . .|||+|+|++..+.. ||+|++|++|+++ ..|++++..+
T Consensus 448 ~p~lLlLDEPt~~LD~~~~~~l~~~L~~~-~-gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~~ 517 (638)
T PRK10636 448 RPNLLLLDEPTNHLDLDMRQALTEALIDF-E-GALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQQ 517 (638)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHHH
Confidence 99999999999999999999999999875 4 599999999999876 9999999999998 5788888743
No 88
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=8.5e-59 Score=639.05 Aligned_cols=473 Identities=19% Similarity=0.195 Sum_probs=363.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 380 ARQLGLRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFY-SNYMFMLPVQISLAIYILRTNLGLGS 458 (1513)
Q Consensus 380 ~~~~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~l~~L~~~lg~~~ 458 (1513)
..+.+.+....+...++++.++.+..++++.++|+|+|+++.|++.+.+.+.. +..+....+.+++.+++++...++.+
T Consensus 949 ~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~~i~~~~p~l~ 1028 (1490)
T TIGR01271 949 LVHTLLTVSKRLHEQMLHSVLQAPMAVLNTMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIFVVSVLQPYIF 1028 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHhCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34667778888889999999999999999999999999999999999987753 33444444444444444433333322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 459 LAALAATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLS 538 (1513)
Q Consensus 459 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~ 538 (1513)
++.++++++++.+..+..+..+..++.....+....+.+.|.++|+.+||.|++|+.|.++..+.-+...+.........
T Consensus 1029 l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1108 (1490)
T TIGR01271 1029 IAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHTANWFLYLSTL 1108 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 32222233333333344444455555566677778899999999999999999999999988775543222111111111
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 000432 539 ATSAFIFWG-SPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQR 617 (1513)
Q Consensus 539 ~~~~~~~~~-~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~ 617 (1513)
.+....... ...++.++ +...+.....++|.+-.++++...+..++..+...+..+..+.+|.+||.++++.+++..
T Consensus 1109 ~wl~~~~~~i~~~~~~~~--~~l~~~~~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~eRi~~~~~~~~e~~ 1186 (1490)
T TIGR01271 1109 RWFQMRIDIIFVFFFIAV--TFIAIGTNQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVSRVFKFIDLPQEEP 1186 (1490)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 111111000 00011111 111111223456666667777778888999888999999999999999999997654322
Q ss_pred cccc----------------ccC-CCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHH
Q 000432 618 DAVE----------------YVP-KGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCI 680 (1513)
Q Consensus 618 ~~~~----------------~~~-~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~l 680 (1513)
...+ ..+ ..+..+.|+|+|++|+|+++ .+++|+|+||+|++||++||||++|||||||+++|
T Consensus 1187 ~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL 1265 (1490)
T TIGR01271 1187 RPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSAL 1265 (1490)
T ss_pred cccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 1100 001 11234679999999999754 46899999999999999999999999999999999
Q ss_pred hcCccCCCcEEEECCe-------------EEEEcCCCcccCccHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCC
Q 000432 681 LGEIQKMAGTVKISGT-------------KAYVPQSPWILTGNIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDL 747 (1513)
Q Consensus 681 lg~~~~~~G~i~~~g~-------------~ayv~Q~~~l~~~ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~ 747 (1513)
+|+++ .+|+|.+||. ++||||+|.+|+|||||||....++++++..++++.|++.+.++.+|+|++
T Consensus 1266 ~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~~~tdeei~~aL~~~~L~~~i~~lp~GLd 1344 (1490)
T TIGR01271 1266 LRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYEQWSDEEIWKVAEEVGLKSVIEQFPDKLD 1344 (1490)
T ss_pred hhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCcccCCCHHHHHHHHHHCCCHHHHHhCccccc
Confidence 99997 7999999983 599999999999999999987777888999999999999999999999999
Q ss_pred ccccCCCCCCChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEE
Q 000432 748 TEIGERGINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILV 827 (1513)
Q Consensus 748 T~Ige~g~~LSGGQkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~v 827 (1513)
|.|||+|.|||||||||++||||++++|+|+|||||||+||++|++.| ++.++...+++|+|+||||++++..||+|+|
T Consensus 1345 t~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I-~~~L~~~~~~~TvI~IaHRl~ti~~~DrIlv 1423 (1490)
T TIGR01271 1345 FVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQII-RKTLKQSFSNCTVILSEHRVEALLECQQFLV 1423 (1490)
T ss_pred cccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHH-HHHHHHHcCCCEEEEEecCHHHHHhCCEEEE
Confidence 999999999999999999999999999999999999999999997777 5677777889999999999999999999999
Q ss_pred EeCCeEEEecChHHHHhcCccHHHHHHhhh
Q 000432 828 MENGRIAQAGRFEELLKQNIGFEVLVGAHS 857 (1513)
Q Consensus 828 l~~G~i~~~g~~~~l~~~~~~~~~l~~~~~ 857 (1513)
|++|+|++.|+|++|+++++.|.++++.+.
T Consensus 1424 L~~G~ivE~g~p~~Ll~~~~~f~~l~~~~~ 1453 (1490)
T TIGR01271 1424 IEGSSVKQYDSIQKLLNETSLFKQAMSAAD 1453 (1490)
T ss_pred EECCEEEEeCCHHHHHcCCcHHHHHHHHhC
Confidence 999999999999999988899999987554
No 89
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3e-59 Score=608.68 Aligned_cols=500 Identities=20% Similarity=0.231 Sum_probs=409.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHH
Q 000432 981 NIVLLVYTLLTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLG 1060 (1513)
Q Consensus 981 ~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~ 1060 (1513)
..|....++..++.+++.--..+...+.|.++-..+-..+|++.+|+.-.--..+++|+|+|-++.|.+.+++.... +.
T Consensus 242 ~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~IY~K~L~ls~~~~~~~t~G~ivNlms~D~~ri~~~~~~-~h 320 (1381)
T KOG0054|consen 242 YLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAIYRKALRLSNSARGETTVGEIVNLMSVDAQRLSDAACF-LH 320 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHhhhcCchhhccCCCcchhhhhhhhhHHHHHHHHHH-HH
Confidence 34444444555556666555666677889999999999999999999988878889999999999999999986543 34
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHH
Q 000432 1061 WCAFSIIQILGTIGVMSQVAWQVFVIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQED 1140 (1513)
Q Consensus 1061 ~~~~~~~~~~~~l~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~ 1140 (1513)
.+....++++.++.++...--+-+++.+.++++++-++.+..+..+..++.....+.......+|.++|+++||.|+||+
T Consensus 321 ~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~~a~~~~~~q~~~m~~~D~Rik~~nEiL~~IkviK~yaWE~ 400 (1381)
T KOG0054|consen 321 LLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSFLAKKIAKFQKRLMKRKDERIKLMNEILNGIKVIKLYAWEK 400 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHhhhHhhhhHhhHH
Confidence 44455556665555554433333444444555666667777777777777777888889999999999999999999999
Q ss_pred HHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1141 RFTNANLSLIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNI 1220 (1513)
Q Consensus 1141 ~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~ 1220 (1513)
.|.++..+..++..+.............+.......++.+++....+....+.++|..+..++++.-.+..++..+-..+
T Consensus 401 ~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv~~~tF~~~v~~~~~~lt~~~aF~slalfniLr~pl~~~P~~i 480 (1381)
T KOG0054|consen 401 PFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLVSVVTFVVFVLLLGNLLTASTAFTSLALFNILRFPLFMLPSVI 480 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccccHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888777766555555444444333333333333222222244667889899999999999999999988889
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCceEEEEEEEEEEcCC-CCcceeeeeEEeeCCcEEEEEcCCC
Q 000432 1221 CNAENKMISVERILQYSNLPSEAPLVTEECRPPSNWPDVGTISFHNLQIRYAEH-LPSVLKNISCTFPGRKKVGVVGRTG 1299 (1513)
Q Consensus 1221 ~~le~~~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~-~~~vLk~is~~I~~GekvgIVGrTG 1299 (1513)
..+-+..+|++|+.+|+..++..+..... .+.-+.+-.|+++|.+|++.++ .++.|+||||+|++||.+||||++|
T Consensus 481 ~~~vqa~VS~~Ri~~fl~~~e~~~~~~~~---~~~~~~~~~i~i~~~sfsW~~~~~~~tL~dIn~~i~~G~lvaVvG~vG 557 (1381)
T KOG0054|consen 481 SQLVQAKVSLKRLKEFLLSEELDPDSVER---SPDEAGENAIEIKNGSFSWDSESPEPTLKDINFEIKKGQLVAVVGPVG 557 (1381)
T ss_pred HHHHHHHHHHHHHHHHhcCcccCcccccc---CCCCCCCceEEEeeeeEecCCCCCcccccceeEEecCCCEEEEECCCC
Confidence 99999999999999999866543322211 1111334579999999999863 4459999999999999999999999
Q ss_pred CCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcH
Q 000432 1300 SGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGD 1379 (1513)
Q Consensus 1300 SGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~ 1379 (1513)
||||||+++++|-.+..+|++.++|. ++||||.|++|+|||||||.++.+++++...++++.|+|++
T Consensus 558 sGKSSLL~AiLGEm~~~sG~v~v~gs-------------iaYv~Q~pWI~ngTvreNILFG~~~d~~rY~~Vi~aC~L~~ 624 (1381)
T KOG0054|consen 558 SGKSSLLSAILGEMPKLSGSVAVNGS-------------VAYVPQQPWIQNGTVRENILFGSPYDEERYDKVIKACALKK 624 (1381)
T ss_pred CCHHHHHHHHhcCcccccceEEEcCe-------------EEEeccccHhhCCcHHHhhhcCccccHHHHHHHHHHccCHh
Confidence 99999999999999999999999993 99999999999999999999999999999999999999999
Q ss_pred HHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHH-HHHHHHhcCCcEEEEeccChh
Q 000432 1380 LVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVI-QKIISQEFKDRTVVTIAHRIH 1458 (1513)
Q Consensus 1380 ~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~I-q~~i~~~~~~~TvI~IAHRl~ 1458 (1513)
.++.+|.|-.|.|||+|.||||||||||+||||++++++|++||+|-||||+++.+.| ++.|+...+++|+|.+||.++
T Consensus 625 Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~~~L~~KT~ILVTHql~ 704 (1381)
T KOG0054|consen 625 DLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIRGLLRGKTVILVTHQLQ 704 (1381)
T ss_pred HHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHHhhhcCCEEEEEeCchh
Confidence 9999999999999999999999999999999999999999999999999999998877 567878889999999999999
Q ss_pred hHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHHHHHHH
Q 000432 1459 TVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIKEY 1498 (1513)
Q Consensus 1459 ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~~~ 1498 (1513)
.+.+||+|+||++|+|+|.|+|+||++. ++.|.++..+.
T Consensus 705 ~L~~ad~Iivl~~G~I~~~Gty~el~~~-~~~~~~l~~~~ 743 (1381)
T KOG0054|consen 705 FLPHADQIIVLKDGKIVESGTYEELLKS-GGDFAELAHEE 743 (1381)
T ss_pred hhhhCCEEEEecCCeEecccCHHHHHhc-chhHHHHhhcc
Confidence 9999999999999999999999999986 78888885543
No 90
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=1.2e-58 Score=587.26 Aligned_cols=510 Identities=15% Similarity=0.153 Sum_probs=372.9
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 308 IFF-FIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQLGLR 386 (1513)
Q Consensus 308 l~~-~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 386 (1513)
+++ .+|+.++++.++.++..++..+.|++++.+++..... .. ...+.+++ ++ ++..++.....+...+.+.+
T Consensus 11 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~--~~-~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~ 83 (555)
T TIGR01194 11 LLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFL--GQ-GSLFSFGG-LC---LLALLFRIGADIFPAYAGMH 83 (555)
T ss_pred HHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc--cc-hHHHHHHH-HH---HHHHHHHHHHHHHHHHHHHH
Confidence 566 7788888889999999999999999999887632111 00 01111221 11 12223333444556778899
Q ss_pred HHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 000432 387 LRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFYSNYMFMLPVQISLAIYIL-RTNLGLGSLAALAAT 465 (1513)
Q Consensus 387 ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~~~l~~L-~~~lg~~~l~~l~~~ 465 (1513)
+...++..+|+|.++++..+++++++|++++++++|++.+.+++..+.......+.++++++++ +..+.++.+ .++.+
T Consensus 84 ~~~~lR~~l~~~l~~~~~~~~~~~~~G~l~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~li-~l~~~ 162 (555)
T TIGR01194 84 IIANLRIALCEKILGAPIEEIDRRGAHNLIPLLTHDIDQINAFLFIFPPIAIALAIFFFCIAYLAYLSVPMFAI-TISAI 162 (555)
T ss_pred HHHHHHHHHHHHHHcCCHHHHHhcCcchhhHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH-HHHHH
Confidence 9999999999999999999999999999999999999999988754444443333333333332 333222222 22222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 466 LTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDT--RFLQKLESLRQVECIWLWKSLRLSATSAF 543 (1513)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~--~f~~~i~~~R~~E~~~~~~~~~~~~~~~~ 543 (1513)
++.+.+..+..++.++...+..+..++..+.+.|.++|++++|.++.|+ ...+++++..++..+...+..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (555)
T TIGR01194 163 IIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIFIAAEN 242 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333444555566677777788888999999999999999999854 33444443332222222211111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHh---cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc-
Q 000432 544 IFWGSPTFISVVTFGACMLL---GIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDA- 619 (1513)
Q Consensus 544 ~~~~~p~~v~~~~f~~~~~~---~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~- 619 (1513)
... ++..+.++.+++. .+.+|.|.+++++.+...+..|+..+.+.+..+.++++|.+||.++++.++.++..
T Consensus 243 ~~~----~~~~~~~~~~~~~~~~~~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~~~~~ 318 (555)
T TIGR01194 243 FGQ----LLFFLLIGCALFAAAMFASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEPEPEL 318 (555)
T ss_pred HHH----HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccc
Confidence 111 1111111111111 25899999999999999999999999999999999999999999998642211100
Q ss_pred --c--ccc---CCCCCcceEEEEeEEEEeCCCC--CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcE
Q 000432 620 --V--EYV---PKGRSEFEVEVVNGKFSWNPES--SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGT 690 (1513)
Q Consensus 620 --~--~~~---~~~~~~~~I~~~~~sf~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~ 690 (1513)
. ... +.......|+++|++|+|++++ ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p~~G~ 398 (555)
T TIGR01194 319 ELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIPQEGE 398 (555)
T ss_pred cccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcE
Confidence 0 000 1111235799999999997532 247999999999999999999999999999999999999999999
Q ss_pred EEECCe-------------EEEEcCCCcccCccHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCC
Q 000432 691 VKISGT-------------KAYVPQSPWILTGNIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINM 757 (1513)
Q Consensus 691 i~~~g~-------------~ayv~Q~~~l~~~ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~L 757 (1513)
|.++|. ++||+|+|++|++|+++|+ ..+.++++.+++++.+++.++++.+|+|++|. .+|
T Consensus 399 i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~--~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~-----~~L 471 (555)
T TIGR01194 399 ILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE--GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT-----TAL 471 (555)
T ss_pred EEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc--ccchhHHHHHHHHHHcCCchhhcccccccCCc-----ccC
Confidence 999984 4899999999999999995 23345667788999999999999999999994 789
Q ss_pred ChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCccccCCEEEEEeCCeEEEe
Q 000432 758 SGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGI-LKDKSVLYVTHQVEFLPAADIILVMENGRIAQA 836 (1513)
Q Consensus 758 SGGQkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~-~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~ 836 (1513)
||||||||+||||++++|+|+|||||||+||+++++.+.+..++.. .+++|+|+||||++.+..||+|++|++|++++.
T Consensus 472 SgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G~i~~~ 551 (555)
T TIGR01194 472 STGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAGCIVKD 551 (555)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999998877655443 468999999999999999999999999999864
No 91
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=3.5e-59 Score=539.68 Aligned_cols=529 Identities=21% Similarity=0.273 Sum_probs=431.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 302 PSIYKAIFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGAR 381 (1513)
Q Consensus 302 ~~l~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~ 381 (1513)
.....+..-.+++.++..+++..+-.++.+.+|+.+-+.-|-+-...+.+ ....+.++....+++..++.....+...
T Consensus 11 ~~~~~a~l~~~r~a~~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s~~--TLv~Ltvlal~ly~~~glLd~iR~~~l~ 88 (580)
T COG4618 11 KNLLAAVLAANRRAFIGVGLFSAVINLLALTGPLYMLQVYDRVLPSRSVP--TLVMLTVLALGLYAFQGLLDAIRSRVLV 88 (580)
T ss_pred CchhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCCcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667777887888888888888999999998888888776544332 4455666666777888888888888889
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 382 QLGLRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFY-----SNYMFMLPVQISLAIYILRTNLGL 456 (1513)
Q Consensus 382 ~~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-----~~~~~~~pl~i~~~l~~L~~~lg~ 456 (1513)
|+|.++...|...+|.-+++.+..........+.+ .|.+.+..|+.. +.+.-.+|+-+.+ +|++...+|+
T Consensus 89 Rig~~lD~~L~~~v~~a~~~~~l~~~~~g~~~Q~L----rDL~qvR~Fltg~g~~A~fDaPW~P~yl~v-~fl~Hp~lG~ 163 (580)
T COG4618 89 RIGERLDRQLNGPVFAASFSAPLLRRGSGDGLQPL----RDLDQVRQFLTGTGLTAFFDAPWMPLYLAV-IFLFHPWLGL 163 (580)
T ss_pred HHHHHHHHHhccHHHHHHHhhHHhhcCCCccccch----hhHHHHHHHHcCCCcchhcCCchHHHHHHH-HHHHHHHHHH
Confidence 99999999999999999876555443333333444 389999998753 2333335665544 4667778999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 457 GSLAALAATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLR 536 (1513)
Q Consensus 457 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~ 536 (1513)
.+++|.++++.+..+|-..++ +--++-.+..-++....+-.++|.++|+..|..+...+++.+.....+.+..+...
T Consensus 164 ~a~~ga~iLv~la~ln~~~t~---~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd 240 (580)
T COG4618 164 IALAGAIILVVLALLNERATR---KPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASD 240 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHH
Confidence 988888888777777755544 44445667778888999999999999999999999999998887777766665554
Q ss_pred HHHHHHHHHHHHH--HHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000432 537 LSATSAFIFWGSP--TFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDE 614 (1513)
Q Consensus 537 ~~~~~~~~~~~~p--~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e 614 (1513)
.......+.=..- .-..++..|+|+++++++|+|.+++.-.+....-.|+......+.++..|+.|.+|++++|.+..
T Consensus 241 ~~~~~~~~Sr~~Rm~lQs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p 320 (580)
T COG4618 241 RNGAFGALSRALRMALQSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELP 320 (580)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 4433322211111 22446778899999999999999999999999999999999999999999999999999997654
Q ss_pred cccccccccCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEEC
Q 000432 615 IQRDAVEYVPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKIS 694 (1513)
Q Consensus 615 ~~~~~~~~~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~ 694 (1513)
.... ..+-+.+++.+.++++++.= ++.++|+|+||||++++|+-++|+||||||||||.++|.|-.+|.+|+|++|
T Consensus 321 ~~~~---~m~LP~P~g~L~Ve~l~~~P-Pg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLD 396 (580)
T COG4618 321 AAAE---RMPLPAPQGALSVERLTAAP-PGQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLD 396 (580)
T ss_pred cccC---CCCCCCCCceeeEeeeeecC-CCCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEec
Confidence 3322 23334566789999999965 4556899999999999999999999999999999999999999999999999
Q ss_pred C-------------eEEEEcCCCcccCccHHHHHc-cCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChH
Q 000432 695 G-------------TKAYVPQSPWILTGNIRENIL-FGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGG 760 (1513)
Q Consensus 695 g-------------~~ayv~Q~~~l~~~ti~eNI~-fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGG 760 (1513)
| .+||.||+..||.|||+|||. |+.+.|+++.-++.++++.++-+-.||+||||.|||.|.+||||
T Consensus 397 ga~l~qWd~e~lG~hiGYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgG 476 (580)
T COG4618 397 GADLRQWDREQLGRHIGYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGG 476 (580)
T ss_pred chhhhcCCHHHhccccCcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCch
Confidence 8 479999999999999999995 99888888887888888888888999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhh-hcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecCh
Q 000432 761 QKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMG-ILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRF 839 (1513)
Q Consensus 761 QkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~-~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~ 839 (1513)
|||||+||||+|.||.+++||||-|+||.+-+..+.+ ++.. ..+|.|+|+||||++.+..+|+|++|+||++...|+-
T Consensus 477 QRQRIaLARAlYG~P~lvVLDEPNsNLD~~GE~AL~~-Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r 555 (580)
T COG4618 477 QRQRIALARALYGDPFLVVLDEPNSNLDSEGEAALAA-AILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPR 555 (580)
T ss_pred HHHHHHHHHHHcCCCcEEEecCCCCCcchhHHHHHHH-HHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCH
Confidence 9999999999999999999999999999998777764 5544 4579999999999999999999999999999999999
Q ss_pred HHHHhc
Q 000432 840 EELLKQ 845 (1513)
Q Consensus 840 ~~l~~~ 845 (1513)
+|.+++
T Consensus 556 ~eVLa~ 561 (580)
T COG4618 556 EEVLAK 561 (580)
T ss_pred HHHHHH
Confidence 998764
No 92
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=7.2e-59 Score=596.89 Aligned_cols=527 Identities=13% Similarity=0.064 Sum_probs=419.8
Q ss_pred hHHHHHHHHhhhh---hhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchh----hHHHHHHHHHHHHHHHHHH
Q 000432 927 KEVYWSYLTAVKG---GALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGM----NIVLLVYTLLTVGSSLCVL 999 (1513)
Q Consensus 927 ~~~~~~y~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~----~~~~~vy~~l~~~~~~~~~ 999 (1513)
++.+++|+++.+. +..+.+.+++.++..++.+..+++++...|.....+ .... ..++++++++.++..+..+
T Consensus 79 ~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~-~~~f~~~l~~~~l~~~~~~~~~~~~~~ 157 (659)
T TIGR00954 79 LDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRS-PRNFAWILFKWFLIAPPASFINSAIKY 157 (659)
T ss_pred HHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445667765544 223445555666777888888998886665432111 1111 2233344445556666677
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 000432 1000 LRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQ- 1078 (1513)
Q Consensus 1000 ~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~- 1078 (1513)
+..++......+..+++|++.+++....++.|||+ ++|++++|+++|++.+...+...+..++..++.+++.+++++.
T Consensus 158 ~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~ 236 (659)
T TIGR00954 158 LLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTA 236 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77777788888999999999999999999999997 8899999999999999999999999999999999988887776
Q ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHH
Q 000432 1079 VAWQVFVIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWF 1158 (1513)
Q Consensus 1079 ~~~~l~lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~ 1158 (1513)
.+|.++++++...++..++.+++.+..+++.+..+...+...+.+.|.++|+++||+|+.|+.+.+++.+..++..+...
T Consensus 237 ~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~ 316 (659)
T TIGR00954 237 LGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLN 316 (659)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 89998888777777778888888888888988888999999999999999999999999999988888888888777777
Q ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHH-HH-H-HHhc----CCccCHHHH-HHHHHH---HHHHHHHHHHHHHHHHHHHHH
Q 000432 1159 HNVSAMEWLCFRLNLLSNFV-FAFSL-VV-L-VTLP----EGIINPSIA-GLAVTY---GINLNVLQASIIWNICNAENK 1226 (1513)
Q Consensus 1159 ~~~~~~~wl~~~l~~~~~~~-~~~~~-~~-~-~~~~----~g~i~~g~~-g~~l~y---~~~l~~~l~~~~~~~~~le~~ 1226 (1513)
.......++....+++.... ..+.. +. . +... .|.++.|.. +.+++| ..++..++..++..+.+++..
T Consensus 317 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~ 396 (659)
T TIGR00954 317 LIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRL 396 (659)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777766666665421 11111 11 1 2221 267887764 335555 456688888899999999999
Q ss_pred HHHHHHHHHhcCCCCCCC-------Cccc--CC-----CCC-----C-CCCCCceEEEEEEEEEEcCCCCcceeeeeEEe
Q 000432 1227 MISVERILQYSNLPSEAP-------LVTE--EC-----RPP-----S-NWPDVGTISFHNLQIRYAEHLPSVLKNISCTF 1286 (1513)
Q Consensus 1227 ~~sveRi~e~~~~~~e~~-------~~~~--~~-----~~~-----~-~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I 1286 (1513)
..+.+|+.++++.++|.. ...+ +. .++ . .....+.|+++||+++|+++ +++|+|+||+|
T Consensus 397 ~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~-~~il~~isl~i 475 (659)
T TIGR00954 397 AGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNG-DVLIESLSFEV 475 (659)
T ss_pred HHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCC-CeeeecceEEE
Confidence 999999999987543211 0000 00 000 0 00134679999999999644 36999999999
Q ss_pred eCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCC------
Q 000432 1287 PGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPL------ 1360 (1513)
Q Consensus 1287 ~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~------ 1360 (1513)
++||++||+|+||||||||+++|.|+++|++|+|.+|+ |+++++|||+|.+|++|+||||...
T Consensus 476 ~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~ 544 (659)
T TIGR00954 476 PSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSEDM 544 (659)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChhhh
Confidence 99999999999999999999999999999999999874 6789999999999999999999742
Q ss_pred --CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHH
Q 000432 1361 --VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQ 1438 (1513)
Q Consensus 1361 --~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq 1438 (1513)
.+.++++++++++.+++++++.+ |.|+||..+ .+.+||||||||++||||++++|++||||||||+||+++++.++
T Consensus 545 ~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~ 622 (659)
T TIGR00954 545 KRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMY 622 (659)
T ss_pred hccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHH
Confidence 24678999999999999999877 999999976 56799999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCcEEEEeccChhhHhhcCEEEEEeC
Q 000432 1439 KIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSD 1471 (1513)
Q Consensus 1439 ~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~ 1471 (1513)
+.+++. ++|+|+||||++++..||+|++|+.
T Consensus 623 ~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 623 RLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 999874 8999999999999999999999973
No 93
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=6.3e-59 Score=631.47 Aligned_cols=212 Identities=21% Similarity=0.288 Sum_probs=178.8
Q ss_pred eEEEEEEEEEEcC-----------CCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC--CCcEEEEcCeeC
Q 000432 1261 TISFHNLQIRYAE-----------HLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP--TMGSIIIDNVDI 1327 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~-----------~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep--~~G~I~IDGvdI 1327 (1513)
.+.|+||++..+. +...+|+|||++++|||.+||+|+||||||||+++|.|..++ .+|+|.+||.++
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 6999999998742 123599999999999999999999999999999999999763 789999999886
Q ss_pred CCCChHHhhhceEEEcCCCcccc-CcHhhccCCC------CCCCHH----HHHHHHHHcCCcHHHHhhhccccchhccCC
Q 000432 1328 TKIGLHDLRSRLGIIPQDPTLFD-GTVRGNLDPL------VQYSDK----QVWEALDKCQLGDLVRAKEEKLDSTVAENG 1396 (1513)
Q Consensus 1328 ~~i~l~~LR~~isiVpQdp~LF~-gTIR~NLdp~------~~~sde----ei~~aL~~~~l~~~I~~lp~gLdt~V~e~G 1396 (1513)
.+ ...|+.++||+|++.++. .|++|||.+. .+.+++ .+.++++..+|.+. .|+.+|..+
T Consensus 947 ~~---~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~~-------~~~~vg~~~ 1016 (1470)
T PLN03140 947 KQ---ETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDNL-------KDAIVGLPG 1016 (1470)
T ss_pred Ch---HHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChhH-------hCCccCCCC
Confidence 43 457788999999998876 5999999631 123333 36678888887643 467777544
Q ss_pred -CCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh-H-hhcCEEEEEeC-
Q 000432 1397 -ENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHT-V-IDSDLVLVLSD- 1471 (1513)
Q Consensus 1397 -~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~t-i-~~~DrIlVLd~- 1471 (1513)
..||||||||++|||||+.+|+||+||||||+||+.+...+.+.|++.. +++|||+++|+++. + ..||++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 6799999999999999999999999999999999999999999998864 47999999999984 4 56999999996
Q ss_pred CEEeEecChhH
Q 000432 1472 GRIAEYDSPTK 1482 (1513)
Q Consensus 1472 G~IvE~Gtp~e 1482 (1513)
|+++.+|++.+
T Consensus 1097 G~~v~~G~~~~ 1107 (1470)
T PLN03140 1097 GQVIYSGPLGR 1107 (1470)
T ss_pred CEEEEECCccc
Confidence 89999998753
No 94
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=4.1e-59 Score=598.79 Aligned_cols=200 Identities=22% Similarity=0.338 Sum_probs=167.2
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++||+++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+ |.++ +|+
T Consensus 319 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i~ 385 (635)
T PRK11147 319 VFEMENVNYQIDG--KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EVA 385 (635)
T ss_pred eEEEeeeEEEECC--eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EEE
Confidence 5999999999964 35999999999999999999999999999999999999999999999 4332 699
Q ss_pred EEcCCC-ccccC-cHhhccCCC-CCC--C--HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1341 IIPQDP-TLFDG-TVRGNLDPL-VQY--S--DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1341 iVpQdp-~LF~g-TIR~NLdp~-~~~--s--deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
|+||++ .++.. |+++|+... ... + +.++.+.++..++.+. ..+.++ ..||||||||++||||+
T Consensus 386 y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~----~~LSgGekqRl~la~al 455 (635)
T PRK11147 386 YFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHPK------RAMTPV----KALSGGERNRLLLARLF 455 (635)
T ss_pred EEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCHH------HHhChh----hhCCHHHHHHHHHHHHH
Confidence 999986 46654 999999642 111 2 4456677777766421 123333 46999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEe-CCEEeEe-cChhHHHh
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLS-DGRIAEY-DSPTKLLE 1485 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd-~G~IvE~-Gtp~eLl~ 1485 (1513)
+++|++|||||||++||..+...+.+.|++. +.|||+|||+.+.+.. ||+|++|+ +|+|+++ |++++-++
T Consensus 456 ~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 456 LKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 9999999999999999999999999999875 5699999999999876 99999998 8999986 67777644
No 95
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=2e-58 Score=591.20 Aligned_cols=199 Identities=20% Similarity=0.281 Sum_probs=166.9
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhce
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRL 1339 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~i 1339 (1513)
..|+++||+++|+++ +++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.+++ +.++
T Consensus 507 ~~L~~~~ls~~y~~~-~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~i 574 (718)
T PLN03073 507 PIISFSDASFGYPGG-PLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVRM 574 (718)
T ss_pred ceEEEEeeEEEeCCC-CeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------ceeE
Confidence 469999999999643 3599999999999999999999999999999999999999999999876 3579
Q ss_pred EEEcCCCccccCcHhhccC-----CCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHc
Q 000432 1340 GIIPQDPTLFDGTVRGNLD-----PLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLL 1414 (1513)
Q Consensus 1340 siVpQdp~LF~gTIR~NLd-----p~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALL 1414 (1513)
+|+||++. ..-++.+|.. .....+++++.++|+..++.+... + .....||||||||++||||++
T Consensus 575 gyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~~------~----~~~~~LSgGqkqRvaLAraL~ 643 (718)
T PLN03073 575 AVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLA------L----QPMYTLSGGQKSRVAFAKITF 643 (718)
T ss_pred EEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHHh------c----CCccccCHHHHHHHHHHHHHh
Confidence 99999973 2234555531 122356788899999998863221 1 224579999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEe-EecChhHH
Q 000432 1415 KKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIA-EYDSPTKL 1483 (1513)
Q Consensus 1415 r~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~Iv-E~Gtp~eL 1483 (1513)
++|++|||||||++||..+...+.+.+++. + .|||+|+|+++.+.. ||+|++|++|+++ ..|++++.
T Consensus 644 ~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~-~-gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~ 712 (718)
T PLN03073 644 KKPHILLLDEPSNHLDLDAVEALIQGLVLF-Q-GGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDY 712 (718)
T ss_pred cCCCEEEEcCCCCCCCHHHHHHHHHHHHHc-C-CEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHH
Confidence 999999999999999999999999988764 4 499999999999986 9999999999998 56777664
No 96
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.7e-58 Score=520.14 Aligned_cols=470 Identities=23% Similarity=0.279 Sum_probs=373.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 382 QLGLRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFYS-NYMFMLPVQISLAIYILRTNLGLGSLA 460 (1513)
Q Consensus 382 ~~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~-~~~~~~pl~i~~~l~~L~~~lg~~~l~ 460 (1513)
..+......+.-..|.+.+.|+..++.++.+|.+.--+..-...|+...+++ ..+....+++.+...+++...||...+
T Consensus 8 ~v~q~a~r~la~~~F~h~~~Lsl~fHl~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~~~~f~~ 87 (497)
T COG5265 8 PVGQIAVRVLAYVTFFHLHSLSLRFHLERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVYGWWFAL 87 (497)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhhhhhcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccHHHH
Confidence 3455555666778899999999999888888887766666666677666654 334455678888888888888876554
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 461 ALAATLTVM-TCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSA 539 (1513)
Q Consensus 461 ~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~ 539 (1513)
..++.++++ .+..........++++..++-.+-.....+.|-|..++|.|+-|+.+..+..+..+.-.+...|......
T Consensus 88 ~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k~~~Sl~ 167 (497)
T COG5265 88 TTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIKVHVSLL 167 (497)
T ss_pred HHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHHHHHHHH
Confidence 444444433 3333344444444444443333344567899999999999999999888877655443333222221111
Q ss_pred HHHHH--HHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 000432 540 TSAFI--FWGSPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQR 617 (1513)
Q Consensus 540 ~~~~~--~~~~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~ 617 (1513)
+..+. ...+..+....+.+...+..+.+|.|.+....++..++..|+..+...+..+.++++..+++.+.+..+-...
T Consensus 168 ~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~~~~~v~ 247 (497)
T COG5265 168 VLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLDVEAEVS 247 (497)
T ss_pred HHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhccchhhc
Confidence 11111 0111122333344445556789999999999999999999999999999999999999999999997664433
Q ss_pred ccccccCCC-CCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe
Q 000432 618 DAVEYVPKG-RSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT 696 (1513)
Q Consensus 618 ~~~~~~~~~-~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~ 696 (1513)
+.....+-. ...+.|.|+|++|.|++. +|+|+++||++++|+++||||++|+||||++++|.++|++.+|.|.++|+
T Consensus 248 d~pda~~L~~~~~g~v~F~~V~F~y~~~--r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG~I~id~q 325 (497)
T COG5265 248 DAPDAPPLWPVRLGAVAFINVSFAYDPR--RPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSGSITIDGQ 325 (497)
T ss_pred cCCCCccccccccceEEEEEEEeecccc--chhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCceEEEcch
Confidence 322211111 345679999999999864 79999999999999999999999999999999999999999999999995
Q ss_pred -------------EEEEcCCCcccCccHHHHHccCCCC-CchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHH
Q 000432 697 -------------KAYVPQSPWILTGNIRENILFGNQY-DSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQK 762 (1513)
Q Consensus 697 -------------~ayv~Q~~~l~~~ti~eNI~fg~~~-~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQk 762 (1513)
+|.|||+.-|||+|+..||.+|+|. .+++...+.+++++.+.++.+|+|++|.|||+|-.||||+|
T Consensus 326 dir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~VgerglklSggek 405 (497)
T COG5265 326 DIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGLKLSGGEK 405 (497)
T ss_pred hHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchheeeccCchH
Confidence 5999999999999999999999986 45667788899999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHH
Q 000432 763 QRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEEL 842 (1513)
Q Consensus 763 qRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l 842 (1513)
|||++||+++++|+|++|||+|||||.||++.| +..++...+|+|.++|+||++++-.||+|+||+||+|+|.|+|+||
T Consensus 406 qrvaiar~ilk~p~il~~deatsaldt~te~~i-q~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~erg~h~~l 484 (497)
T COG5265 406 QRVAIARTILKNPPILILDEATSALDTHTEQAI-QAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVERGTHEEL 484 (497)
T ss_pred HHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHH-HHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEecCcHHHH
Confidence 999999999999999999999999999998877 6778888899999999999999999999999999999999999999
Q ss_pred HhcCccHHHHHH
Q 000432 843 LKQNIGFEVLVG 854 (1513)
Q Consensus 843 ~~~~~~~~~l~~ 854 (1513)
++.+|.|+++|.
T Consensus 485 l~~~g~ya~mw~ 496 (497)
T COG5265 485 LAAGGLYAEMWR 496 (497)
T ss_pred HHcCChHHHHhc
Confidence 999999999873
No 97
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=7.3e-56 Score=561.86 Aligned_cols=508 Identities=15% Similarity=0.146 Sum_probs=357.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 304 IYKAIFFFIRKKAAINASFAVINAATSYV-GPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVETIAQRQWIFGARQ 382 (1513)
Q Consensus 304 l~~~l~~~~~~~~~~~~~~~l~~~~~~~~-~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~ 382 (1513)
+++.+++.+++.++...++.++..++..+ .|++.+.++|.+.. .. ...+.+++.+++..+ ......+...+
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~--~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~ 74 (547)
T PRK10522 3 LLRLVWRQYRWPFISVMALSLASAALGIGLIAFINQRLIETADT--SL--LVLPEFLGLLLLLMA----VTLGSQLALTT 74 (547)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--cc--hHHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 56778888888888888888888888877 47787888886532 11 111111111122212 22233444567
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 383 LGLRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFYSNYMFMLPVQISLAIYILRTNLGLGSLAAL 462 (1513)
Q Consensus 383 ~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~~~l~~L~~~lg~~~l~~l 462 (1513)
++.++...++..+|+|.++++...++++++|+++|++++|++.+..++..+..++...+.+++++++++..-+..+++.+
T Consensus 75 ~~~~~~~~lR~~l~~~ll~~~~~~~~~~~~g~~lsrl~~dv~~i~~~~~~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l 154 (547)
T PRK10522 75 LGHHFVYRLRSEFIKRILDTHVERIEQLGSASLLASLTSDVRNITIAFVRLPELVQGIILTLGSAAYLAWLSPKMLLVTA 154 (547)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHhccCccchHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 78888888999999999999999999999999999999999999986555555566666666555544433233333334
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 463 AATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQA--WDTRFLQKLESLRQVECIWLWKSLRLSAT 540 (1513)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~--~E~~f~~~i~~~R~~E~~~~~~~~~~~~~ 540 (1513)
+++++.+.+...+.++.++..++.++..+++.+.++|.++|++++++.. .++.+.+++++..++..+...+.......
T Consensus 155 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (547)
T PRK10522 155 IWMAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELTLNRERAEYVFENEYEPDAQEYRHHIIRADTFHLS 234 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhhccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHH
Confidence 4444444455666777778888889999999999999999999997432 33345555544333222211111111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc---cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Q 000432 541 SAFIFWGSPTFISVVTFGACMLLGI---QLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQR 617 (1513)
Q Consensus 541 ~~~~~~~~p~~v~~~~f~~~~~~~~---~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~ 617 (1513)
..... .++..+.++.+++.++ ..+.+.+..+..+...+..|+..+...+..+.+++++.+|+.++++.++.++
T Consensus 235 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~ 310 (547)
T PRK10522 235 AVNWS----NIMMLGAIGLVFYMANSLGWADTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAE 310 (547)
T ss_pred HHHHH----HHHHHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 11111 1111112222222221 1223333333333344678999999999999999999999999986544221
Q ss_pred ccccccCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-
Q 000432 618 DAVEYVPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT- 696 (1513)
Q Consensus 618 ~~~~~~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~- 696 (1513)
.. +..+. +....++++|++|+|++ ++++|+|+||+|++|+++||+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 311 ~~-~~~~~-~~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~ 386 (547)
T PRK10522 311 FP-RPQAF-PDWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKP 386 (547)
T ss_pred cc-ccccc-CcCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEE
Confidence 11 11111 11247999999999973 347999999999999999999999999999999999999999999999884
Q ss_pred ------------EEEEcCCCcccCccHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHH
Q 000432 697 ------------KAYVPQSPWILTGNIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQR 764 (1513)
Q Consensus 697 ------------~ayv~Q~~~l~~~ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqR 764 (1513)
++||+|+|++|++|++|| +.+.++++.++.++.+++..+++. ++|. .+|.+||||||||
T Consensus 387 ~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~~~~~~~~~~~~~~~~~l~~~~~~-~~~~-----~~G~~LSgGq~qR 457 (547)
T PRK10522 387 VTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---GKPANPALVEKWLERLKMAHKLEL-EDGR-----ISNLKLSKGQKKR 457 (547)
T ss_pred CCCCCHHHHhhheEEEecChhHHHHhhccc---cCchHHHHHHHHHHHcCCchhhhc-cccC-----CCCCCCCHHHHHH
Confidence 599999999999999999 444555566666666665554432 2221 1489999999999
Q ss_pred HHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccccCCEEEEEeCCeEEEe
Q 000432 765 IQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPAADIILVMENGRIAQA 836 (1513)
Q Consensus 765 i~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~ 836 (1513)
++||||++++|+++|||||||+||+++++.+.+...+... +++|+|+||||++.+..||+|++|++|++++.
T Consensus 458 l~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~ 530 (547)
T PRK10522 458 LALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 530 (547)
T ss_pred HHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999998888654433222 48999999999999999999999999999876
No 98
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=2.9e-56 Score=547.02 Aligned_cols=485 Identities=22% Similarity=0.345 Sum_probs=344.8
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC--eEEEEcCCCcccC
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG--TKAYVPQSPWILT 708 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g--~~ayv~Q~~~l~~ 708 (1513)
.|.++|++++|+ ++++|+|+|+++.+|++++|||+||+||||||++|.|+..|++|+|...+ +++|++|++....
T Consensus 3 ~i~~~~ls~~~g---~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~~G~i~~~~~~~v~~l~Q~~~~~~ 79 (530)
T COG0488 3 MITLENLSLAYG---DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPDSGEVTRPKGLRVGYLSQEPPLDP 79 (530)
T ss_pred eEEEeeeEEeeC---CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCCCCeEeecCCceEEEeCCCCCcCC
Confidence 488999999995 36899999999999999999999999999999999999999999999987 7999999999986
Q ss_pred c-cHHHHHccCCCCC---chHHHHHHHH---------Hhc------------HHHHhhcc--CCCCccccCCCCCCChHH
Q 000432 709 G-NIRENILFGNQYD---SCKYDRTVEA---------CAL------------VKDFELFA--SGDLTEIGERGINMSGGQ 761 (1513)
Q Consensus 709 ~-ti~eNI~fg~~~~---~~~~~~v~~~---------~~l------------~~d~~~l~--~Gd~T~Ige~g~~LSGGQ 761 (1513)
. ||.|.+.-|...- ..+|++.... ..+ +.+++..- -|...+ ...-.+|||||
T Consensus 80 ~~tv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~~LSGG~ 158 (530)
T COG0488 80 EKTVLDYVIEGFGELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVSSLSGGW 158 (530)
T ss_pred CccHHHHHHhhhHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchhhcCHHH
Confidence 5 9999999875311 1112221110 000 01111111 122222 23345799999
Q ss_pred HHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCeE-EEecCh
Q 000432 762 KQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGRI-AQAGRF 839 (1513)
Q Consensus 762 kqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i-~~~g~~ 839 (1513)
|.||+|||||..+||+|||||||++||.++.+.+ ++.+.. .+| |+|+|||+.+||.. |++|+.+++|++ .+.|+|
T Consensus 159 r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WL-e~~L~~-~~g-tviiVSHDR~FLd~V~t~I~~ld~g~l~~y~Gny 235 (530)
T COG0488 159 RRRVALARALLEEPDLLLLDEPTNHLDLESIEWL-EDYLKR-YPG-TVIVVSHDRYFLDNVATHILELDRGKLTPYKGNY 235 (530)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHH-HHHHHh-CCC-cEEEEeCCHHHHHHHhhheEEecCCceeEecCCH
Confidence 9999999999999999999999999999986665 445543 356 99999999999987 999999999988 688999
Q ss_pred HHHHhcCccHHHHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhhhcCCCchhhhH
Q 000432 840 EELLKQNIGFEVLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITEKGGKLVQEEE 919 (1513)
Q Consensus 840 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 919 (1513)
+.+++.+..-.+.... .. ++ ++++
T Consensus 236 ~~~~~~r~~~~~~~~~--------------------------------------------------~~-~~-----~~~~ 259 (530)
T COG0488 236 SSYLEQKAERLRQEAA--------------------------------------------------AY-EK-----QQKE 259 (530)
T ss_pred HHHHHHHHHHHHHHHH--------------------------------------------------HH-HH-----HHHH
Confidence 8887643210000000 00 00 0000
Q ss_pred hhhcccchHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHH
Q 000432 920 REKGSIGKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVL 999 (1513)
Q Consensus 920 ~~~g~v~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~ 999 (1513)
.+ ....++..
T Consensus 260 ~~-------~~~~~i~r--------------------------------------------------------------- 269 (530)
T COG0488 260 LA-------KEQEWIRR--------------------------------------------------------------- 269 (530)
T ss_pred HH-------HHHHHHHH---------------------------------------------------------------
Confidence 00 00000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1000 LRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQV 1079 (1513)
Q Consensus 1000 ~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~ 1079 (1513)
+..
T Consensus 270 --------------------------------------------~~~--------------------------------- 272 (530)
T COG0488 270 --------------------------------------------GKA--------------------------------- 272 (530)
T ss_pred --------------------------------------------HHh---------------------------------
Confidence 000
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHH
Q 000432 1080 AWQVFVIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFH 1159 (1513)
Q Consensus 1080 ~~~l~lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~ 1159 (1513)
...++++
T Consensus 273 ---------------------~~~~~k~---------------------------------------------------- 279 (530)
T COG0488 273 ---------------------AASKAKK---------------------------------------------------- 279 (530)
T ss_pred ---------------------ccchHHH----------------------------------------------------
Confidence 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--c
Q 000432 1160 NVSAMEWLCFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQY--S 1237 (1513)
Q Consensus 1160 ~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~--~ 1237 (1513)
.+..+...+|+.+- .
T Consensus 280 ---------------------------------------------------------------a~sr~k~l~k~~~~~~~ 296 (530)
T COG0488 280 ---------------------------------------------------------------AKSRIKRLEKLEARLAE 296 (530)
T ss_pred ---------------------------------------------------------------HHHHHHHHHHHHhhhhh
Confidence 00000111111110 0
Q ss_pred CCCCCCCCcc-cCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCC
Q 000432 1238 NLPSEAPLVT-EECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPT 1316 (1513)
Q Consensus 1238 ~~~~e~~~~~-~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~ 1316 (1513)
..|.+..... -...+++.-..+-.++++|+++.|.++ .++++++||.|++|++||||||+|+|||||+++|.|-..|.
T Consensus 297 ~~~~~~~~~~~~~f~~~~~~~g~~vl~~~~~~~~y~~~-~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~ 375 (530)
T COG0488 297 ERPVEEGKPLAFRFPPPGKRLGKLVLEFENVSKGYDGG-RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPL 375 (530)
T ss_pred cccccccccceeeccCCcccCCCeeEEEeccccccCCC-ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccC
Confidence 0011100000 000111111123479999999999766 56999999999999999999999999999999999999999
Q ss_pred CcEEEEcCeeCCCCChHHhhhceEEEcCCC-ccc-cCcHhhccCCCC-CCCHHHHHHHHHHcCCcHHHHhhhccccchhc
Q 000432 1317 MGSIIIDNVDITKIGLHDLRSRLGIIPQDP-TLF-DGTVRGNLDPLV-QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVA 1393 (1513)
Q Consensus 1317 ~G~I~IDGvdI~~i~l~~LR~~isiVpQdp-~LF-~gTIR~NLdp~~-~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~ 1393 (1513)
+|+|.+.- .-++||.+|+- .++ +.|+-+++.... +..+.++...|.+.++...- ..++|
T Consensus 376 ~G~v~~g~-----------~v~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~~------~~~~v- 437 (530)
T COG0488 376 SGTVKVGE-----------TVKIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGED------QEKPV- 437 (530)
T ss_pred CceEEeCC-----------ceEEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChHH------HhCch-
Confidence 99998754 13699999998 444 338888886433 44488999999999986432 23444
Q ss_pred cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCC
Q 000432 1394 ENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDG 1472 (1513)
Q Consensus 1394 e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G 1472 (1513)
..||||||-|+.||+.++.+|.+|||||||.+||.+|-..+.++|.+ |+| |||+|+|+...+.. |++|+++++
T Consensus 438 ---~~LSGGEk~Rl~La~ll~~~pNvLiLDEPTNhLDi~s~~aLe~aL~~-f~G-tvl~VSHDr~Fl~~va~~i~~~~~- 511 (530)
T COG0488 438 ---GVLSGGEKARLLLAKLLLQPPNLLLLDEPTNHLDIESLEALEEALLD-FEG-TVLLVSHDRYFLDRVATRIWLVED- 511 (530)
T ss_pred ---hhcCHhHHHHHHHHHHhccCCCEEEEcCCCccCCHHHHHHHHHHHHh-CCC-eEEEEeCCHHHHHhhcceEEEEcC-
Confidence 46999999999999999999999999999999999999999999975 555 99999999999988 999999999
Q ss_pred EEeEe-cChhHHHhc
Q 000432 1473 RIAEY-DSPTKLLER 1486 (1513)
Q Consensus 1473 ~IvE~-Gtp~eLl~~ 1486 (1513)
++.++ |++++-.+.
T Consensus 512 ~~~~~~g~y~~y~~~ 526 (530)
T COG0488 512 KVEEFEGGYEDYLEQ 526 (530)
T ss_pred ceeEcCCCHHHHHHh
Confidence 88888 888887765
No 99
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=5.4e-57 Score=569.00 Aligned_cols=192 Identities=21% Similarity=0.310 Sum_probs=163.9
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.++++|++++|++ ..|+++||+|++||.+||+|++|||||||+++|.|+.+|++|+|.++ .+++
T Consensus 340 ~l~~~~ls~~~~~---~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~-------------~~i~ 403 (590)
T PRK13409 340 LVEYPDLTKKLGD---FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE-------------LKIS 403 (590)
T ss_pred EEEEcceEEEECC---EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe-------------eeEE
Confidence 5999999999964 25999999999999999999999999999999999999999999986 1599
Q ss_pred EEcCCCcc-ccCcHhhccCCC-CCC-CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCC
Q 000432 1341 IIPQDPTL-FDGTVRGNLDPL-VQY-SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKS 1417 (1513)
Q Consensus 1341 iVpQdp~L-F~gTIR~NLdp~-~~~-sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~ 1417 (1513)
|+||++.+ ++.|+++|+... ..+ .++.+.++++..++.+.. |.+ ..+||||||||++|||||+++|
T Consensus 404 y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~~~-------~~~----~~~LSGGe~QRvaiAraL~~~p 472 (590)
T PRK13409 404 YKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLERLL-------DKN----VKDLSGGELQRVAIAACLSRDA 472 (590)
T ss_pred EecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHHHH-------hCC----cccCCHHHHHHHHHHHHHhcCC
Confidence 99999875 467999999642 122 234567788888876543 333 3469999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecCh
Q 000432 1418 SILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSP 1480 (1513)
Q Consensus 1418 ~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp 1480 (1513)
+||||||||++||.++...+.+.|++..+ ++|+|+|+|+++.+.. ||||++|++ ++...|+.
T Consensus 473 ~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~~-~~~~~g~~ 537 (590)
T PRK13409 473 DLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFEG-EPGKHGHA 537 (590)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEcC-cceeeeec
Confidence 99999999999999999999999998643 7899999999999876 999999965 88777763
No 100
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=4.6e-53 Score=543.23 Aligned_cols=504 Identities=16% Similarity=0.156 Sum_probs=370.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 315 KAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLES-GYLLALAFLGAKMVETIAQRQWIFGARQLGLRLRAALIS 393 (1513)
Q Consensus 315 ~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~-g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~ 393 (1513)
.++..+++.++.+++....|++.+.++|.+..++...+.. .+.+++++++..++.++... ...++..++|..+..
T Consensus 97 ~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~----~~~~~~~~~r~~l~~ 172 (659)
T TIGR00954 97 LLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKY----LLKELKLRFRVRLTR 172 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHH
Confidence 4667778888899999999999999999886543211111 22233333333444444333 344455555555555
Q ss_pred HHHHHHhc----CCcccccCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q 000432 394 HLYRKGLH----LSSQSRQSHTSGEIINYMSVDVQRISDFIFY-SNYMFMLPVQISLAIYILRTNLGLGS-LAALAATLT 467 (1513)
Q Consensus 394 ~iy~K~L~----l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~-~~~~~~~pl~i~~~l~~L~~~lg~~~-l~~l~~~~~ 467 (1513)
.++++.++ .+..++++ ++|++++++++|++.+.+.+.. +..+...++.++.+++.++..++|.. ++.++..++
T Consensus 173 ~l~~~~~~~~~~~~~~~~d~-~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~~~~~~l~l~~l~~~~l 251 (659)
T TIGR00954 173 YLYSKYLSGFTFYKVSNLDS-RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLTALGSVGPAGLFAYLFA 251 (659)
T ss_pred HHHHHHhCCCceEEeccCCC-CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 55555544 33334443 5799999999999999988764 34445556666666666776566533 333444455
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 468 VMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDTRFLQKLESLRQVECIWLWKSLRLSATSAFIFWG 547 (1513)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~~f~~~i~~~R~~E~~~~~~~~~~~~~~~~~~~~ 547 (1513)
.+.+...+.+..++..++.++..++-....+|.++|+++||.|+-|+.+.+++++.-++..+...+.....+....+...
T Consensus 252 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 331 (659)
T TIGR00954 252 TGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHLNLIIKFRFSYGFLDNI 331 (659)
T ss_pred HHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 55566777888888888889999999999999999999999999999988888776655555555555544443332221
Q ss_pred H----HHHHHHHHHHHHHHh-c----ccccHHHHHH-HHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 000432 548 S----PTFISVVTFGACMLL-G----IQLTAGRVLS-ALA---TFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDE 614 (1513)
Q Consensus 548 ~----p~~v~~~~f~~~~~~-~----~~Lt~~~~ft-~l~---l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e 614 (1513)
. ...+..+..+..++. . +.+|.|..+. +++ ++..+..|+..+.+.+..++++.++.+|+.++++.++
T Consensus 332 i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~~~~~~~Ri~~ll~~~~ 411 (659)
T TIGR00954 332 VAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTRLAGFTARVDTLLQVLD 411 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 122222223332332 2 5788887655 333 4667799999999999999999999999999997533
Q ss_pred cccc------cccc-----------------cCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCC
Q 000432 615 IQRD------AVEY-----------------VPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGS 671 (1513)
Q Consensus 615 ~~~~------~~~~-----------------~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~Gs 671 (1513)
...+ .... .........|+++|++|+|++ ++++|+|+||+|++||+++|+|||||
T Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~~il~~isl~i~~Ge~~~IvG~nGs 489 (659)
T TIGR00954 412 DVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GDVLIESLSFEVPSGNHLLICGPNGC 489 (659)
T ss_pred HHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--CCeeeecceEEECCCCEEEEECCCCC
Confidence 2110 0000 000012346999999999963 24799999999999999999999999
Q ss_pred cHHHHHHHHhcCccCCCcEEEECC--eEEEEcCCCcccCccHHHHHccCCC--------CCchHHHHHHHHHhcHHHHhh
Q 000432 672 GKSSLLSCILGEIQKMAGTVKISG--TKAYVPQSPWILTGNIRENILFGNQ--------YDSCKYDRTVEACALVKDFEL 741 (1513)
Q Consensus 672 GKStLl~~llg~~~~~~G~i~~~g--~~ayv~Q~~~l~~~ti~eNI~fg~~--------~~~~~~~~v~~~~~l~~d~~~ 741 (1513)
|||||+++|+|+++|.+|+|.+++ .++||||+|+++++|++|||.++.. .++++.+++++.+++.+.++.
T Consensus 490 GKSTLl~lL~Gl~~~~~G~i~~~~~~~i~~v~Q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~i~~~l~~~~l~~~~~~ 569 (659)
T TIGR00954 490 GKSSLFRILGELWPVYGGRLTKPAKGKLFYVPQRPYMTLGTLRDQIIYPDSSEDMKRRGLSDKDLEQILDNVQLTHILER 569 (659)
T ss_pred CHHHHHHHHhCCCCCCCCeEeecCCCcEEEECCCCCCCCcCHHHHHhcCCChhhhhccCCCHHHHHHHHHHcCCHHHHhh
Confidence 999999999999999999999875 6899999999999999999999742 344566788888888877776
Q ss_pred ccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc
Q 000432 742 FASGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA 821 (1513)
Q Consensus 742 l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~ 821 (1513)
|.|++|..+ .+.+||||||||++||||++++|+++|||||||+||+++++.+.+ .++. .++|+|+||||++.++.
T Consensus 570 -~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~l~~-~l~~--~~~tvI~isH~~~~~~~ 644 (659)
T TIGR00954 570 -EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGYMYR-LCRE--FGITLFSVSHRKSLWKY 644 (659)
T ss_pred -cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHH-HHHH--cCCEEEEEeCchHHHHh
Confidence 999999876 567999999999999999999999999999999999999888765 4444 38999999999999999
Q ss_pred CCEEEEEeC
Q 000432 822 ADIILVMEN 830 (1513)
Q Consensus 822 ~d~i~vl~~ 830 (1513)
||+|++|++
T Consensus 645 ~d~il~l~~ 653 (659)
T TIGR00954 645 HEYLLYMDG 653 (659)
T ss_pred CCEEEEEeC
Confidence 999999973
No 101
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-53 Score=509.33 Aligned_cols=443 Identities=24% Similarity=0.373 Sum_probs=334.1
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------- 696 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------- 696 (1513)
.-++++|++.+|+. .++|+|+||++.+||++|++|+||+|||||+|.|.|.|+|++|+|.++|.
T Consensus 7 ~ll~~~~i~K~Fgg---V~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~ 83 (500)
T COG1129 7 PLLELRGISKSFGG---VKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAA 83 (500)
T ss_pred ceeeeecceEEcCC---ceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhC
Confidence 35889999999974 58999999999999999999999999999999999999999999999995
Q ss_pred -EEEEcCCCccc-CccHHHHHccCCCCCc-------hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHH
Q 000432 697 -KAYVPQSPWIL-TGNIRENILFGNQYDS-------CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQI 767 (1513)
Q Consensus 697 -~ayv~Q~~~l~-~~ti~eNI~fg~~~~~-------~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~l 767 (1513)
|+.|.|+.-|+ +-||.|||-+|++... .+.++ ++..+.+.+.. +..-++ .-.+||+||||-|+|
T Consensus 84 GI~~V~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~--~A~~~l~~lg~-~~~~~~----~v~~LsiaqrQ~VeI 156 (500)
T COG1129 84 GIATVHQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRR--RARELLARLGL-DIDPDT----LVGDLSIAQRQMVEI 156 (500)
T ss_pred CcEEEeechhccCCccHHHHhhcccccccCCCccCHHHHHH--HHHHHHHHcCC-CCChhh----hhhhCCHHHHHHHHH
Confidence 58999999888 4599999999876432 22221 22222222211 111233 445799999999999
Q ss_pred HHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecCh-HHHHh
Q 000432 768 ARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRF-EELLK 844 (1513)
Q Consensus 768 ARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~-~~l~~ 844 (1513)
|||++.+++|+|||||||+|+.+..+++|+ .++.+. +|.++|+|||+++.+. -||+|.||+||+.+..++. .++
T Consensus 157 ArAl~~~arllIlDEPTaaLt~~E~~~Lf~-~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~-- 233 (500)
T COG1129 157 ARALSFDARVLILDEPTAALTVKETERLFD-LIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAET-- 233 (500)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCC--
Confidence 999999999999999999999999999986 455554 6999999999998865 5999999999998864331 000
Q ss_pred cCccHHHHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhhhcCCCchhhhHhhhcc
Q 000432 845 QNIGFEVLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITEKGGKLVQEEEREKGS 924 (1513)
Q Consensus 845 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~ 924 (1513)
+ . ++
T Consensus 234 -----------------------------------------------------------~-~----------~~------ 237 (500)
T COG1129 234 -----------------------------------------------------------S-E----------DE------ 237 (500)
T ss_pred -----------------------------------------------------------C-H----------HH------
Confidence 0 0 00
Q ss_pred cchHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 925 IGKEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAML 1004 (1513)
Q Consensus 925 v~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~ 1004 (1513)
.++..
T Consensus 238 --------lv~~M------------------------------------------------------------------- 242 (500)
T COG1129 238 --------LVRLM------------------------------------------------------------------- 242 (500)
T ss_pred --------HHHHh-------------------------------------------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 000432 1005 VAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVF 1084 (1513)
Q Consensus 1005 ~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~ 1084 (1513)
+||
T Consensus 243 --------------------------------vGr--------------------------------------------- 245 (500)
T COG1129 243 --------------------------------VGR--------------------------------------------- 245 (500)
T ss_pred --------------------------------hCc---------------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHH
Q 000432 1085 VIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAM 1164 (1513)
Q Consensus 1085 lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~ 1164 (1513)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Q 000432 1165 EWLCFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAP 1244 (1513)
Q Consensus 1165 ~wl~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~ 1244 (1513)
+..+..++ +
T Consensus 246 ----------------------------------------------------------------------~~~~~~~~-~ 254 (500)
T COG1129 246 ----------------------------------------------------------------------ELEDLFPE-P 254 (500)
T ss_pred ----------------------------------------------------------------------chhhhccc-c
Confidence 00000000 0
Q ss_pred CcccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcC
Q 000432 1245 LVTEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDN 1324 (1513)
Q Consensus 1245 ~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDG 1324 (1513)
. .. -+..-.++++|++.. ..++|+||++++||.+||.|--|||+|-++++|||.-++.+|+|.+||
T Consensus 255 -~-~~------~~~~~~l~v~~l~~~------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~~~~G~i~l~G 320 (500)
T COG1129 255 -P-EE------GIGEPVLEVRNLSGG------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARPASSGEILLDG 320 (500)
T ss_pred -c-cc------CCCCcEEEEecCCCC------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCcCCCceEEECC
Confidence 0 00 011124677777643 158999999999999999999999999999999999999999999999
Q ss_pred eeCCCCChH-HhhhceEEEcCCCc---cc-cCcHhhccCCC--CCCCHH-HHHHHHHHcCCcHHHHhhh---ccccchhc
Q 000432 1325 VDITKIGLH-DLRSRLGIIPQDPT---LF-DGTVRGNLDPL--VQYSDK-QVWEALDKCQLGDLVRAKE---EKLDSTVA 1393 (1513)
Q Consensus 1325 vdI~~i~l~-~LR~~isiVpQdp~---LF-~gTIR~NLdp~--~~~sde-ei~~aL~~~~l~~~I~~lp---~gLdt~V~ 1393 (1513)
.++.--+++ ..+..|+|||-|-- || .-+|++|+... ..++.. -+...-++.-..++++++. ...+.++
T Consensus 321 ~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~~~~v- 399 (500)
T COG1129 321 KPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSPEQPI- 399 (500)
T ss_pred EEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCccchh-
Confidence 988877766 58889999998874 44 56999999632 111100 1223333333444555442 2334444
Q ss_pred cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hcCEEEEEeC
Q 000432 1394 ENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVI-DSDLVLVLSD 1471 (1513)
Q Consensus 1394 e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~-~~DrIlVLd~ 1471 (1513)
.+||||.+|+++|||.|..+|+||||||||.++|..+.+.|.+.|++.. +|.+||+|+-.++.+. .||||+||.+
T Consensus 400 ---~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~~~DRIlVm~~ 476 (500)
T COG1129 400 ---GTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLGLSDRILVMRE 476 (500)
T ss_pred ---hcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHhhCCEEEEEEC
Confidence 4799999999999999999999999999999999999999999999876 5799999999999988 5999999999
Q ss_pred CEEeEecChhH
Q 000432 1472 GRIAEYDSPTK 1482 (1513)
Q Consensus 1472 G~IvE~Gtp~e 1482 (1513)
|+|+..=+.++
T Consensus 477 Gri~~e~~~~~ 487 (500)
T COG1129 477 GRIVGELDREE 487 (500)
T ss_pred CEEEEEecccc
Confidence 99997444333
No 102
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=8.4e-55 Score=501.11 Aligned_cols=239 Identities=38% Similarity=0.644 Sum_probs=230.1
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhce
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRL 1339 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~i 1339 (1513)
|.|+|+||+++|+++.+++|+|+||+|++||++||+||||||||||+++|+|+++ ++|+|.|||+|+.+++.+++|+++
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 5799999999998666679999999999999999999999999999999999998 799999999999999999999999
Q ss_pred EEEcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCE
Q 000432 1340 GIIPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSI 1419 (1513)
Q Consensus 1340 siVpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~I 1419 (1513)
+||||+|.+|++|+++|+++++..+++++|++++.+++.+++.++|++||+.++|+|.+||||||||+|||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999998877889999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHHHHHHHh
Q 000432 1420 LVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIKEYS 1499 (1513)
Q Consensus 1420 LiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~~~~ 1499 (1513)
|||||||++||+++++.+++.|++.+++||+|+||||++++..||||+||++|+++|+|+|++|+++ .++|++++++..
T Consensus 160 lllDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~-~~~~~~~~~~~~ 238 (275)
T cd03289 160 LLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE-KSHFKQAISPSD 238 (275)
T ss_pred EEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC-cHHHHHHHhhcc
Confidence 9999999999999999999999998889999999999999999999999999999999999999996 699999998776
Q ss_pred h
Q 000432 1500 M 1500 (1513)
Q Consensus 1500 ~ 1500 (1513)
.
T Consensus 239 ~ 239 (275)
T cd03289 239 R 239 (275)
T ss_pred h
Confidence 3
No 103
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=3.7e-51 Score=475.95 Aligned_cols=443 Identities=22% Similarity=0.394 Sum_probs=336.9
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------- 696 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------- 696 (1513)
..+++++++..|+ ...+++||||+|++||+.|++|+||+|||||++.|.|.|+|++|+|.++|+
T Consensus 3 ~~l~~~~itK~f~---~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~ 79 (501)
T COG3845 3 PALEMRGITKRFP---GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRL 79 (501)
T ss_pred ceEEEeccEEEcC---CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHc
Confidence 4689999999997 357899999999999999999999999999999999999999999999995
Q ss_pred -EEEEcCCCcccCc-cHHHHHccCCCCC------chHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHH
Q 000432 697 -KAYVPQSPWILTG-NIRENILFGNQYD------SCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIA 768 (1513)
Q Consensus 697 -~ayv~Q~~~l~~~-ti~eNI~fg~~~~------~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lA 768 (1513)
||+|.|++-|+.. ||.|||..|.+-. ....++-++..+ +. .|..-...++-..||-||||||.|-
T Consensus 80 GIGMVhQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~--~~-----yGl~vdp~~~V~dLsVG~qQRVEIl 152 (501)
T COG3845 80 GIGMVHQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELS--ER-----YGLPVDPDAKVADLSVGEQQRVEIL 152 (501)
T ss_pred CCcEEeeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHH--HH-----hCCCCCccceeecCCcchhHHHHHH
Confidence 5999999999865 9999999998632 111111111111 11 1222222344567999999999999
Q ss_pred HHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHhcC
Q 000432 769 RAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGI-LKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLKQN 846 (1513)
Q Consensus 769 Ral~~~~~illLDep~salD~~~~~~i~~~~~~~~-~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 846 (1513)
+|||++|+++|||||||-|-|...+++|+- ++.+ ..|||||+|||+++.+.. ||++.||++|+++. +++..
T Consensus 153 KaLyr~a~iLILDEPTaVLTP~E~~~lf~~-l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvg--t~~~~---- 225 (501)
T COG3845 153 KALYRGARLLILDEPTAVLTPQEADELFEI-LRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVG--TVDPV---- 225 (501)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHH-HHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEe--eecCC----
Confidence 999999999999999999999999999964 4444 469999999999988765 99999999999763 21100
Q ss_pred ccHHHHHHhhhhhhhhhcccccCCCCCCCCCCCCccCcCccccccccccCCCccchhhhhhhhcCCCchhhhHhhhcccc
Q 000432 847 IGFEVLVGAHSQALESVLTVETSSRTSQDPTPESELNSDSTSNVKLVHSQHDSEHELSLEITEKGGKLVQEEEREKGSIG 926 (1513)
Q Consensus 847 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~ 926 (1513)
.+ . . .+|-.
T Consensus 226 ---------------------------------~~------------------~---t-----------~~ela------ 234 (501)
T COG3845 226 ---------------------------------AE------------------T---T-----------EEELA------ 234 (501)
T ss_pred ---------------------------------CC------------------C---C-----------HHHHH------
Confidence 00 0 0 00000
Q ss_pred hHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 927 KEVYWSYLTAVKGGALVPIILLAQSSFQVLQVASNYWMAWASPPTSDGEPALGMNIVLLVYTLLTVGSSLCVLLRAMLVA 1006 (1513)
Q Consensus 927 ~~~~~~y~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~vy~~l~~~~~~~~~~~~~~~~ 1006 (1513)
+ ++
T Consensus 235 --------~---------lM------------------------------------------------------------ 237 (501)
T COG3845 235 --------E---------LM------------------------------------------------------------ 237 (501)
T ss_pred --------H---------Hh------------------------------------------------------------
Confidence 0 00
Q ss_pred HHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 000432 1007 ITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFSIIQILGTIGVMSQVAWQVFVI 1086 (1513)
Q Consensus 1007 ~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~~~~~~~~l~v~~~~~~~l~lv 1086 (1513)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHH
Q 000432 1087 FIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEW 1166 (1513)
Q Consensus 1087 ~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~w 1166 (1513)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCc
Q 000432 1167 LCFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSNLPSEAPLV 1246 (1513)
Q Consensus 1167 l~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~~~~e~~~~ 1246 (1513)
+ ...+. .+.+
T Consensus 238 ----------------------v-G~~v~-------------------------------------------~~~~---- 247 (501)
T COG3845 238 ----------------------V-GREVV-------------------------------------------LRVV---- 247 (501)
T ss_pred ----------------------c-CCccc-------------------------------------------cccc----
Confidence 0 00000 0000
Q ss_pred ccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCee
Q 000432 1247 TEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVD 1326 (1513)
Q Consensus 1247 ~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvd 1326 (1513)
. ++.-|..-.++++|++..=+.+. +.++||||++++||.+||.|=.|-|-+.|+.+|.|+..|.+|+|.++|.|
T Consensus 248 ----~-~~~~pg~~vL~V~~L~v~~~~~~-~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~~G~I~l~G~~ 321 (501)
T COG3845 248 ----K-PPSTPGEVVLEVEDLSVKDRRGV-TAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPASGRILLNGKD 321 (501)
T ss_pred ----c-CCCCCCCeEEEEeeeEeecCCCC-ceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccCCceEEECCEe
Confidence 0 01112234689999999754433 57999999999999999999999999999999999999999999999999
Q ss_pred C-CCCChHHhhh-ceEEEcCCCc----cccCcHhhccCCCCC----------CCHHHHHHHHHHcCCcHHHHhh---hcc
Q 000432 1327 I-TKIGLHDLRS-RLGIIPQDPT----LFDGTVRGNLDPLVQ----------YSDKQVWEALDKCQLGDLVRAK---EEK 1387 (1513)
Q Consensus 1327 I-~~i~l~~LR~-~isiVpQdp~----LF~gTIR~NLdp~~~----------~sdeei~~aL~~~~l~~~I~~l---p~g 1387 (1513)
+ ...+....|. .+++||.|.. ..+-|+.||+-+... .+-.++.+..+ +.+++. +.+
T Consensus 322 v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~-----~li~~fdVr~~~ 396 (501)
T COG3845 322 VLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFAR-----ELIEEFDVRAPS 396 (501)
T ss_pred ccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHHH-----HHHHHcCccCCC
Confidence 8 6677777655 6999999984 567799999853211 11223322221 122221 223
Q ss_pred ccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCE
Q 000432 1388 LDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDL 1465 (1513)
Q Consensus 1388 Ldt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~Dr 1465 (1513)
.+++ ..+||||+.|++-+||-|.++|++||..+||-+||..+.+.|.+.|.+.. +|+.|+.|+-.|+.+.. |||
T Consensus 397 ~~~~----a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLDEil~lsDr 472 (501)
T COG3845 397 PDAP----ARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLDEILELSDR 472 (501)
T ss_pred CCcc----hhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHHHHHHhhhe
Confidence 3333 35799999999999999999999999999999999999999999887765 68999999999999887 999
Q ss_pred EEEEeCCEEeEecChhH
Q 000432 1466 VLVLSDGRIAEYDSPTK 1482 (1513)
Q Consensus 1466 IlVLd~G~IvE~Gtp~e 1482 (1513)
|.||.+|+|+....+++
T Consensus 473 IaVi~~Gri~~~~~~~~ 489 (501)
T COG3845 473 IAVIYEGRIVGIVPPEE 489 (501)
T ss_pred eeeeeCCceeccccccc
Confidence 99999999998887776
No 104
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-50 Score=478.19 Aligned_cols=257 Identities=20% Similarity=0.372 Sum_probs=220.5
Q ss_pred HHHHHHHHHHHhcCCCCCCCCccc------C---CCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEE
Q 000432 1225 NKMISVERILQYSNLPSEAPLVTE------E---CRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVV 1295 (1513)
Q Consensus 1225 ~~~~sveRi~e~~~~~~e~~~~~~------~---~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIV 1295 (1513)
..+.+++|+.+|+..+.|.....+ + ...+..||..+.|+|+|++++|+++.+++|+|+||+|++||++|||
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~Iv 114 (329)
T PRK14257 35 QKLNKYQRAFAWLKLPKQKKAELKQFLNKKKTQVDLLKEDFNHANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFI 114 (329)
T ss_pred hccccccchhhHHhcccccchhhhhcccccccccccccCCCCcCceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEE
Confidence 345667777777666554322111 1 0113469999999999999999765567999999999999999999
Q ss_pred cCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCC--CCChHHhhhceEEEcCCCccccCcHhhccCCC---CCCCH
Q 000432 1296 GRTGSGKSTLIQAIFRIVE-----PTMGSIIIDNVDIT--KIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPL---VQYSD 1365 (1513)
Q Consensus 1296 GrTGSGKSTLl~lL~rl~e-----p~~G~I~IDGvdI~--~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~---~~~sd 1365 (1513)
||||||||||+++|+|+++ |++|+|.|||+|+. ++++.++|++++||||+|.+|++||++||++. ..+++
T Consensus 115 G~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~ 194 (329)
T PRK14257 115 GPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGIND 194 (329)
T ss_pred CCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCCh
Confidence 9999999999999999997 57999999999997 56678899999999999999999999999832 23555
Q ss_pred HHH-----HHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHH
Q 000432 1366 KQV-----WEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKI 1440 (1513)
Q Consensus 1366 eei-----~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~ 1440 (1513)
++. .++++.+++. +++++.++++|.+||||||||+|||||++++|+||+||||||+||+++.+.+++.
T Consensus 195 ~~~~~~~~~~~l~~~~L~-------~~l~~~~~~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~ 267 (329)
T PRK14257 195 RKILEKIVEKSLKSAALW-------DEVKDDLDKAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEEL 267 (329)
T ss_pred HHHHHHHHHHHHHHcCCc-------chhhhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHH
Confidence 554 5567777764 3456888999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCC
Q 000432 1441 ISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLERED 1488 (1513)
Q Consensus 1441 i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~ 1488 (1513)
|++.++++|+|+||||++++.+ ||||+||++|+|+|.|+|+++.+++.
T Consensus 268 i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~~~ 316 (329)
T PRK14257 268 ILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIHPK 316 (329)
T ss_pred HHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcCCC
Confidence 9999999999999999999998 99999999999999999999988654
No 105
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-46 Score=390.85 Aligned_cols=216 Identities=28% Similarity=0.451 Sum_probs=193.9
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCC-CCChHHhhhce
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDIT-KIGLHDLRSRL 1339 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~-~i~l~~LR~~i 1339 (1513)
.|+++||+.+|++. .||||||++|++||.+.|+||||||||||+++|.++-+|++|+|.|||.++. +.++..+|+++
T Consensus 2 mi~i~~l~K~fg~~--~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~v 79 (240)
T COG1126 2 MIEIKNLSKSFGDK--EVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKV 79 (240)
T ss_pred eEEEEeeeEEeCCe--EEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhc
Confidence 48999999999864 5999999999999999999999999999999999999999999999998774 33788999999
Q ss_pred EEEcCCCccccC-cHhhccCCC----CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHH
Q 000432 1340 GIIPQDPTLFDG-TVRGNLDPL----VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLG 1410 (1513)
Q Consensus 1340 siVpQdp~LF~g-TIR~NLdp~----~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LA 1410 (1513)
|+|+|...||.- |+-+|+... ...+ .+.-.+.|+++||.|.....|. .|||||+||+|||
T Consensus 80 GmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP~-----------qLSGGQqQRVAIA 148 (240)
T COG1126 80 GMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYPA-----------QLSGGQQQRVAIA 148 (240)
T ss_pred CeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCcc-----------ccCcHHHHHHHHH
Confidence 999999999965 999999532 1222 3345678899999998887774 6799999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCC
Q 000432 1411 RTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLERED 1488 (1513)
Q Consensus 1411 RALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~ 1488 (1513)
|||.-+|+|+++||||||||||.-..+.+.+++.. .|.|.|+|||.+...++ ||||+.||+|+|+|.|+|+++..++.
T Consensus 149 RALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p~ 228 (240)
T COG1126 149 RALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNPK 228 (240)
T ss_pred HHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCCC
Confidence 99999999999999999999999999999998876 57899999999999998 99999999999999999999998865
Q ss_pred h
Q 000432 1489 S 1489 (1513)
Q Consensus 1489 ~ 1489 (1513)
.
T Consensus 229 ~ 229 (240)
T COG1126 229 S 229 (240)
T ss_pred C
Confidence 3
No 106
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=3.7e-45 Score=420.25 Aligned_cols=240 Identities=52% Similarity=0.850 Sum_probs=225.1
Q ss_pred CCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhh
Q 000432 1258 DVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRS 1337 (1513)
Q Consensus 1258 ~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~ 1337 (1513)
..|.|+++|++++|++....+|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.+.+...+|+
T Consensus 16 ~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 16 LGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 46789999999999764346999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCC
Q 000432 1338 RLGIIPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKS 1417 (1513)
Q Consensus 1338 ~isiVpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~ 1417 (1513)
+++++||+|.+|++|+++|+++.....+++++++++.+++.+.+..+|.|+++.+++.+.+||+|||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999875445577889999999999999999999999999999999999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHHHHHH
Q 000432 1418 SILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIKE 1497 (1513)
Q Consensus 1418 ~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~~ 1497 (1513)
++|+|||||++||+++.+.+.+.+++..+++|+|+++|+++.+..||||++|++|++++.|+++++.+.+++.|+.++..
T Consensus 176 ~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~ 255 (257)
T cd03288 176 SILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLVRT 255 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHHhc
Confidence 99999999999999999999999998777899999999999999999999999999999999999998877888887754
No 107
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-45 Score=433.32 Aligned_cols=263 Identities=22% Similarity=0.335 Sum_probs=221.4
Q ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccCCCCCcceEEEEeEEEEeCCC
Q 000432 565 IQLTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRDAVEYVPKGRSEFEVEVVNGKFSWNPE 644 (1513)
Q Consensus 565 ~~Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~~~~~~~~~~~~~~I~~~~~sf~~~~~ 644 (1513)
+.+++..+|+.+++|+.+..|+..+|..... ..|+.+|+..++.+...... ..+....|+++|++++|+++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~nls~~y~~~ 93 (329)
T PRK14257 23 NELDAKAIYDEFQKLNKYQRAFAWLKLPKQK-------KAELKQFLNKKKTQVDLLKE--DFNHANVFEIRNFNFWYMNR 93 (329)
T ss_pred chhHHHHHHHHhhccccccchhhHHhccccc-------chhhhhcccccccccccccC--CCCcCceEEEEeeEEEecCC
Confidence 5789999999999999999999888765443 56999998876643311111 11234679999999999642
Q ss_pred CCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCcc-----CCCcEEEECC---------------eEEEEcCCC
Q 000432 645 SSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQ-----KMAGTVKISG---------------TKAYVPQSP 704 (1513)
Q Consensus 645 ~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~-----~~~G~i~~~g---------------~~ayv~Q~~ 704 (1513)
..++|+|+||+|++||+++|+|++|||||||+++|+|+++ |++|+|.++| .++||||+|
T Consensus 94 -~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~ 172 (329)
T PRK14257 94 -TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKP 172 (329)
T ss_pred -CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCC
Confidence 3579999999999999999999999999999999999997 5799998765 369999999
Q ss_pred cccCccHHHHHccCCCCC----ch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCC
Q 000432 705 WILTGNIRENILFGNQYD----SC----KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDAD 776 (1513)
Q Consensus 705 ~l~~~ti~eNI~fg~~~~----~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~ 776 (1513)
|+|++||+|||.|+..++ ++ .++++++.|++.+++ ++.++++|.+|||||||||+||||++++|+
T Consensus 173 ~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l-------~~~~~~~~~~LSgGqkqRl~LARAl~~~p~ 245 (329)
T PRK14257 173 TPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEV-------KDDLDKAGNALSGGQQQRLCIARAIALEPE 245 (329)
T ss_pred ccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchh-------hhhhhCCcccCCHHHHHHHHHHHHHHhCCC
Confidence 999999999999875332 22 255666777765443 478899999999999999999999999999
Q ss_pred EEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000432 777 IYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 777 illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
||||||||||||+++.+++ .++++.+.+++|+|+|||+++++.. ||+|++|++|+|++.|+++++...
T Consensus 246 IlLLDEPts~LD~~~~~~i-~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~l~~~ 314 (329)
T PRK14257 246 VLLMDEPTSALDPIATAKI-EELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKTIFIH 314 (329)
T ss_pred EEEEeCCcccCCHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999998774 6788888888999999999999887 999999999999999999998754
No 108
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-45 Score=403.52 Aligned_cols=227 Identities=30% Similarity=0.446 Sum_probs=198.1
Q ss_pred EEEEEEEEEEcCC---CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC---hHHh
Q 000432 1262 ISFHNLQIRYAEH---LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIG---LHDL 1335 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~---~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~---l~~L 1335 (1513)
|+++||++.|... ...+|+||||+|++||..||||+||||||||++++-++-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 8999999999763 346999999999999999999999999999999999999999999999998888766 5556
Q ss_pred hhceEEEcCCCcccc-CcHhhccC-CCC--CCCHH----HHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHH
Q 000432 1336 RSRLGIIPQDPTLFD-GTVRGNLD-PLV--QYSDK----QVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLF 1407 (1513)
Q Consensus 1336 R~~isiVpQdp~LF~-gTIR~NLd-p~~--~~sde----ei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl 1407 (1513)
|++||+|+|++-|++ .|+.+|+. |+. ..+.+ ++.+.|+.+||.|...+-| .+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~yP-----------~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADRYP-----------AQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhccCc-----------hhcCcchhhHH
Confidence 889999999999997 79999997 332 34443 4667889999888766655 57999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1408 CLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1408 ~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
+|||||..+|+||+.|||||+||++|-+.|.+.|++.- -|-|+++|||-++.|++ ||||.||++|+|+|.|+-.++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999999887653 37899999999999998 9999999999999999999999
Q ss_pred hcC-ChHHHHHHHHHh
Q 000432 1485 ERE-DSFFSQLIKEYS 1499 (1513)
Q Consensus 1485 ~~~-~~~f~~l~~~~~ 1499 (1513)
.++ +..-++++.+..
T Consensus 231 ~~Pk~~~t~~fi~~~~ 246 (339)
T COG1135 231 ANPKHAITQEFIGETL 246 (339)
T ss_pred cCcchHHHHHHHHhhc
Confidence 887 344555665443
No 109
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3.6e-44 Score=407.72 Aligned_cols=234 Identities=34% Similarity=0.534 Sum_probs=217.1
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|+.+..++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (237)
T cd03252 1 ITFEHVRFRYKPDGPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGV 80 (237)
T ss_pred CEEEEEEEecCCCCccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEE
Confidence 57999999997544569999999999999999999999999999999999999999999999999998888889999999
Q ss_pred EcCCCccccCcHhhccCCCC-CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEE
Q 000432 1342 IPQDPTLFDGTVRGNLDPLV-QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSIL 1420 (1513)
Q Consensus 1342 VpQdp~LF~gTIR~NLdp~~-~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~IL 1420 (1513)
+||++.+|+.|+++||.... ..+.+++.++++..++.+++..+|.|+++.....+.+||||||||++||||++++|++|
T Consensus 81 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 160 (237)
T cd03252 81 VLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRIL 160 (237)
T ss_pred EcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEE
Confidence 99999999999999997543 34567788888999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHHHHH
Q 000432 1421 VLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIK 1496 (1513)
Q Consensus 1421 iLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~ 1496 (1513)
||||||++||+.+...+.+.|++..+++|+|+++|+++.+..||+|++|++|++++.|++++++++ .+.|+.+++
T Consensus 161 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~~ 235 (237)
T cd03252 161 IFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE-NGLYAYLYQ 235 (237)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc-cChHHHHHh
Confidence 999999999999999999999988778999999999999988999999999999999999999987 677777664
No 110
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=4.6e-44 Score=416.64 Aligned_cols=193 Identities=22% Similarity=0.360 Sum_probs=161.1
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|.++||+|+|.++. ..+++++|-|.++++||+|||+|+|||||++++.+.+.|+.|.+.-.-.. +++
T Consensus 389 vi~~~nv~F~y~~~~-~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H~-----------~~~ 456 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP-MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSHN-----------KLP 456 (614)
T ss_pred eEEEeccccCCCCcc-hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccccccccccccccc-----------cch
Confidence 599999999998764 79999999999999999999999999999999999999999988643211 222
Q ss_pred EEcC---CCccccCcHhhccCC-CC-CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHcc
Q 000432 1341 IIPQ---DPTLFDGTVRGNLDP-LV-QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLK 1415 (1513)
Q Consensus 1341 iVpQ---dp~LF~gTIR~NLdp-~~-~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr 1415 (1513)
.--| |-...+-|.-+|..| +. +-..+++...|.++||....+.. ++ ++||+|||.|+++||++++
T Consensus 457 ~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~~------p~----~~LS~Gqr~rVlFa~l~~k 526 (614)
T KOG0927|consen 457 RYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQVV------PM----SQLSDGQRRRVLFARLAVK 526 (614)
T ss_pred hhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCcccccc------ch----hhcccccchhHHHHHHHhc
Confidence 2223 445567777777754 23 35668889999999998544333 33 4799999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEe
Q 000432 1416 KSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEY 1477 (1513)
Q Consensus 1416 ~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~ 1477 (1513)
.|.||||||||++||.+|-....++|.+ |.| +||+|+|+...|.. +++|++.++|.+...
T Consensus 527 qP~lLlLDEPtnhLDi~tid~laeaiNe-~~G-gvv~vSHDfrlI~qVaeEi~~c~~~~~~~~ 587 (614)
T KOG0927|consen 527 QPHLLLLDEPTNHLDIETIDALAEAINE-FPG-GVVLVSHDFRLISQVAEEIWVCENGTVTKW 587 (614)
T ss_pred CCcEEEecCCCcCCCchhHHHHHHHHhc-cCC-ceeeeechhhHHHHHHHHhHhhccCceeec
Confidence 9999999999999999999999999965 444 89999999999987 999999999998875
No 111
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=9.5e-44 Score=399.94 Aligned_cols=221 Identities=62% Similarity=0.987 Sum_probs=210.0
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhce
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRL 1339 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~i 1339 (1513)
|.|+++|++++|++...++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+.+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 1 GDIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred CcEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 56999999999975444699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCE
Q 000432 1340 GIIPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSI 1419 (1513)
Q Consensus 1340 siVpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~I 1419 (1513)
+|+||+|.+|++|+++|++++...+++++.++++..++.+++.++|.|+++...+.+.+||+|||||++||||++++|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999998766778899999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecCh
Q 000432 1420 LVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSP 1480 (1513)
Q Consensus 1420 LiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp 1480 (1513)
|+|||||++||+.+.+.+.+.|++..+++|+|+++|+++.+..||+|++|++|++++.|++
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~ 221 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDSP 221 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCCC
Confidence 9999999999999999999999988778999999999999999999999999999998864
No 112
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-44 Score=375.31 Aligned_cols=220 Identities=27% Similarity=0.461 Sum_probs=199.1
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCC-----cEEEEcCeeCCC--CCh
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTM-----GSIIIDNVDITK--IGL 1332 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~-----G~I~IDGvdI~~--i~l 1332 (1513)
..++++|+++-|... .+|+|||++|++++.+|++|||||||||++++|-|+.+..+ |+|.+||.||-+ ++.
T Consensus 6 ~~~~~~~l~~yYg~~--~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 6 PAIEVRDLNLYYGDK--HALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred ceeEecceeEEECch--hhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 468999999999854 59999999999999999999999999999999999999886 999999999987 578
Q ss_pred HHhhhceEEEcCCCccccCcHhhccCCCC---C----CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1333 HDLRSRLGIIPQDPTLFDGTVRGNLDPLV---Q----YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1333 ~~LR~~isiVpQdp~LF~gTIR~NLdp~~---~----~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
-.||+++|+|+|.|.-|..||.||+.++. . .-||-+.++|+++.|+|.|.. .| .+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD---rL----~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD---RL----HKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH---Hh----hCCccCCChhHHH
Confidence 89999999999999999999999997531 1 224557889999999998864 23 4567789999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
||||||||.-+|+||+||||||+||+.+-.+|.+.|.+..++-||++|||.+.-... +|+...+..|+++|+|.-+++-
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999899999999999998766 9999999999999999999998
Q ss_pred hcCC
Q 000432 1485 ERED 1488 (1513)
Q Consensus 1485 ~~~~ 1488 (1513)
.++.
T Consensus 237 ~~P~ 240 (253)
T COG1117 237 TNPK 240 (253)
T ss_pred cCcc
Confidence 8763
No 113
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-43 Score=379.21 Aligned_cols=217 Identities=29% Similarity=0.479 Sum_probs=195.0
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+|+||+++|.+ ..+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.||++++...||++|||
T Consensus 2 I~~~nvsk~y~~--~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGY 79 (309)
T COG1125 2 IEFENVSKRYGN--KKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGY 79 (309)
T ss_pred ceeeeeehhcCC--ceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhh
Confidence 799999999984 359999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCcccc-CcHhhccCCC---CCCC----HHHHHHHHHHcCCc--HHHHhhhccccchhccCCCCCChhHHHHHHHHH
Q 000432 1342 IPQDPTLFD-GTVRGNLDPL---VQYS----DKQVWEALDKCQLG--DLVRAKEEKLDSTVAENGENWSVGQRQLFCLGR 1411 (1513)
Q Consensus 1342 VpQdp~LF~-gTIR~NLdp~---~~~s----deei~~aL~~~~l~--~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LAR 1411 (1513)
|-|..-||. -||.+||..- ...+ ++++.+.++.++|. +|..+.|. .|||||+||+.+||
T Consensus 80 viQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~RyP~-----------eLSGGQQQRVGv~R 148 (309)
T COG1125 80 VIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRYPH-----------ELSGGQQQRVGVAR 148 (309)
T ss_pred hhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcCch-----------hcCcchhhHHHHHH
Confidence 999999995 5999999632 2333 45567889999996 46666664 57999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHh-hcCEEEEEeCCEEeEecChhHHHhcCC
Q 000432 1412 TLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVI-DSDLVLVLSDGRIAEYDSPTKLLERED 1488 (1513)
Q Consensus 1412 ALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~-~~DrIlVLd~G~IvE~Gtp~eLl~~~~ 1488 (1513)
||..+|+||+||||.+|||+-|...+|+-+.+.- -++|+|+|||+++... -+|||.||++|+|+.+|+|+++++++.
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~Pa 228 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANPA 228 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCcc
Confidence 9999999999999999999999999999877654 3789999999999854 599999999999999999999999986
Q ss_pred hHH
Q 000432 1489 SFF 1491 (1513)
Q Consensus 1489 ~~f 1491 (1513)
.-|
T Consensus 229 n~F 231 (309)
T COG1125 229 NDF 231 (309)
T ss_pred HHH
Confidence 554
No 114
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-42 Score=394.95 Aligned_cols=231 Identities=35% Similarity=0.566 Sum_probs=213.4
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|+....++|+|+||++++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (234)
T cd03251 1 VEFKNVTFRYPGDGPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGL 80 (234)
T ss_pred CEEEEEEEEeCCCCccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 57899999997543359999999999999999999999999999999999999999999999999998888889999999
Q ss_pred EcCCCccccCcHhhccCCC-CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEE
Q 000432 1342 IPQDPTLFDGTVRGNLDPL-VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSIL 1420 (1513)
Q Consensus 1342 VpQdp~LF~gTIR~NLdp~-~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~IL 1420 (1513)
+||+|.+|+.|+++|+... ...+.+++.++++.+++.++++.+|.|+++.......+||+|||||++|||||+++|++|
T Consensus 81 ~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~ll 160 (234)
T cd03251 81 VSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPIL 160 (234)
T ss_pred eCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999764 234667788888999999999999999999998899999999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHH
Q 000432 1421 VLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQ 1493 (1513)
Q Consensus 1421 iLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~ 1493 (1513)
+|||||++||+.+...+.+.|++..++.|+|+++|+++.+..||+|++|++|++++.|+++++.++ .+.|+.
T Consensus 161 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~ 232 (234)
T cd03251 161 ILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ-GGVYAK 232 (234)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc-Ccchhh
Confidence 999999999999999999999988788999999999999999999999999999999999999876 455554
No 115
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-42 Score=392.49 Aligned_cols=233 Identities=37% Similarity=0.616 Sum_probs=215.9
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|+.+ ..+|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++++.+...+|+.++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 79 (236)
T cd03253 1 IEFENVTFAYDPG-RPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGV 79 (236)
T ss_pred CEEEEEEEEeCCC-CceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEE
Confidence 5789999999643 359999999999999999999999999999999999999999999999999999998899999999
Q ss_pred EcCCCccccCcHhhccCCC-CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEE
Q 000432 1342 IPQDPTLFDGTVRGNLDPL-VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSIL 1420 (1513)
Q Consensus 1342 VpQdp~LF~gTIR~NLdp~-~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~IL 1420 (1513)
+||+|.+|++|+++|+... ...+++++.++++.+++.+.+..+|.|+++.+.....+||+|||||++|||||+++|++|
T Consensus 80 ~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~ll 159 (236)
T cd03253 80 VPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPIL 159 (236)
T ss_pred ECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999999999999999753 345677888999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHHHHH
Q 000432 1421 VLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLIK 1496 (1513)
Q Consensus 1421 iLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~~ 1496 (1513)
||||||++||+++...+.+.|++..++.|+|+++|+++.+..||++++|++|++++.|+++++.++ .+.|+.++.
T Consensus 160 llDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~-~~~~~~~~~ 234 (236)
T cd03253 160 LLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK-GGLYAEMWK 234 (236)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc-ccHHHHHHh
Confidence 999999999999999999999887668899999999999999999999999999999999999876 577776654
No 116
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.6e-42 Score=384.21 Aligned_cols=207 Identities=57% Similarity=0.944 Sum_probs=190.1
Q ss_pred CCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHh
Q 000432 1256 WPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDL 1335 (1513)
Q Consensus 1256 wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~L 1335 (1513)
||..+.|+++|++++|+....++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+.+..++
T Consensus 1 ~~~~~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 1 WPEHGEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCCeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 88899999999999997543469999999999999999999999999999999999999999999999999998888889
Q ss_pred hhceEEEcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHcc
Q 000432 1336 RSRLGIIPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLK 1415 (1513)
Q Consensus 1336 R~~isiVpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr 1415 (1513)
|++++|+||+|.+|++|+++|+..+...+++++.++++ +.+...+||||||||++||||+++
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~ 142 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDEYSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLK 142 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCCCCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999998665556666655554 234677899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecCh
Q 000432 1416 KSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSP 1480 (1513)
Q Consensus 1416 ~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp 1480 (1513)
+|+||+|||||++||+++...+.+.|++..+++|+|+++|+++.+..||+|++|++|++++.|+|
T Consensus 143 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 143 RPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 99999999999999999999999999988778999999999999988999999999999999875
No 117
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-42 Score=390.15 Aligned_cols=226 Identities=38% Similarity=0.636 Sum_probs=211.0
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhce
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRL 1339 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~i 1339 (1513)
|.|+++|++++|+.. .++++|+||+|++||++||+|++|||||||+++|.|+++|.+|+|.+||.++.+.+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 1 GEIEFENVNFSYDEK-KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred CeEEEEEEEEecCCC-CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 469999999999643 3599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEcCCCccccCcHhhccCCCC-CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCC
Q 000432 1340 GIIPQDPTLFDGTVRGNLDPLV-QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSS 1418 (1513)
Q Consensus 1340 siVpQdp~LF~gTIR~NLdp~~-~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ 1418 (1513)
+|+||+|.+|++|+++|+.... ...++++.++++.+++.++++.+|.|+++.+.....+||||||||++|||||+++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999997543 345678888999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhc
Q 000432 1419 ILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1419 ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
+|+|||||++||+.+.+.+.+.|++..+++|+|+|+|+++.+..||+|++|++|++++.|+++++.++
T Consensus 160 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 99999999999999999999999987678999999999999988999999999999999999888765
No 118
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.3e-42 Score=398.05 Aligned_cols=223 Identities=25% Similarity=0.399 Sum_probs=202.7
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC-------------eE
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG-------------TK 697 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g-------------~~ 697 (1513)
.|+++|++++|+++ ..++|+|+||+|++||+++|+|++|||||||+++|.|+++ .+|+|.++| .+
T Consensus 2 ~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 2 QMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred eEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 58999999999643 3579999999999999999999999999999999999998 799999998 36
Q ss_pred EEEcCCCcccCccHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000432 698 AYVPQSPWILTGNIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDADI 777 (1513)
Q Consensus 698 ayv~Q~~~l~~~ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~i 777 (1513)
+||||+|++|++|++||+.+..++++++..++++.+++.+.++.+|+|++|.++|+|.+||||||||++||||++++|+|
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~i 159 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGKWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAKI 159 (275)
T ss_pred EEECCCcccchhhHHHHhhhccCCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999974444666788889999999999999999999999999999999999999999999999999
Q ss_pred EEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHHHHHHhh
Q 000432 778 YLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQNIGFEVLVGAH 856 (1513)
Q Consensus 778 llLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~l~~~~ 856 (1513)
+||||||++||+++.+.+ ++.+....+++|+|+|||+++++..||+|++|++|++++.|+++++++..+.|++++...
T Consensus 160 lllDEpts~LD~~~~~~l-~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~~~~~~~~~~~~ 237 (275)
T cd03289 160 LLLDEPSAHLDPITYQVI-RKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNEKSHFKQAISPS 237 (275)
T ss_pred EEEECccccCCHHHHHHH-HHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhCcHHHHHHHhhc
Confidence 999999999999997666 456666566899999999999988899999999999999999999999888888887644
No 119
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=3e-42 Score=407.45 Aligned_cols=224 Identities=29% Similarity=0.451 Sum_probs=194.7
Q ss_pred EEEEEEEEEEcCC--CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHH---hh
Q 000432 1262 ISFHNLQIRYAEH--LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHD---LR 1336 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~--~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~---LR 1336 (1513)
|+++||+++|+.+ ..++|+||||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.|+.+++..+ +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 7899999999632 246999999999999999999999999999999999999999999999999999887655 58
Q ss_pred hceEEEcCCCcccc-CcHhhccCCC---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHH
Q 000432 1337 SRLGIIPQDPTLFD-GTVRGNLDPL---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFC 1408 (1513)
Q Consensus 1337 ~~isiVpQdp~LF~-gTIR~NLdp~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~ 1408 (1513)
++|++|||++.+|. .|+++|+... ...+ ++++.++++.+++.+...+.| ..||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----------~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYP-----------SNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 89999999999995 7999999631 1222 345778899999887654443 479999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHh
Q 000432 1409 LGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1409 LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
|||||+.+|+||+||||||+||++|...|.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+|+|.|+++++..
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999998753 7899999999999976 99999999999999999999987
Q ss_pred cCCh-HHHHHHH
Q 000432 1486 REDS-FFSQLIK 1496 (1513)
Q Consensus 1486 ~~~~-~f~~l~~ 1496 (1513)
++.. ..++++.
T Consensus 231 ~p~~~~~~~~~~ 242 (343)
T TIGR02314 231 HPKTPLAQKFIR 242 (343)
T ss_pred CCCcHHHHHHHh
Confidence 6543 3444544
No 120
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=6.4e-42 Score=389.46 Aligned_cols=233 Identities=36% Similarity=0.635 Sum_probs=212.6
Q ss_pred EEEEEEEEEEcCC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1262 ISFHNLQIRYAEH-LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
|+++|++++|+.. ..++|+|+||++++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 5789999999653 236999999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEcCCCccccCcHhhccCCC-CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCE
Q 000432 1341 IIPQDPTLFDGTVRGNLDPL-VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSI 1419 (1513)
Q Consensus 1341 iVpQdp~LF~gTIR~NLdp~-~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~I 1419 (1513)
|+||+|.+|+.|+++|+... ...+.+++.+.++..++.+++..+|.|+++.......+||||||||++||||++.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999754 23456778888999999999999999999999988999999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHHHH
Q 000432 1420 LVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLI 1495 (1513)
Q Consensus 1420 LiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~ 1495 (1513)
|+|||||++||+++.+.+.+.|++..+++|+|+++|+++.+..||+|++|++|++++.|+++++.+. .+..+.++
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~-~~~~~~~~ 235 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ-KGVYAKLV 235 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc-ChhHHHHh
Confidence 9999999999999999999999887678999999999999999999999999999999999998875 45555544
No 121
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.5e-41 Score=393.68 Aligned_cols=193 Identities=21% Similarity=0.304 Sum_probs=166.4
Q ss_pred CCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhh
Q 000432 1258 DVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRS 1337 (1513)
Q Consensus 1258 ~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~ 1337 (1513)
+...+++.+|+|.|.|+.++.++++++++..-+++++||++|+||||+++++.+-.+|..|.+-+.+ |.
T Consensus 359 ~~p~l~i~~V~f~y~p~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~ 427 (582)
T KOG0062|consen 359 SPPNLRISYVAFEYTPSEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RL 427 (582)
T ss_pred CCCeeEEEeeeccCCCcchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cc
Confidence 3447999999999999887899999999999999999999999999999999999999999998877 88
Q ss_pred ceEEEcCCCccccCcHhhcc---CC----CCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHH
Q 000432 1338 RLGIIPQDPTLFDGTVRGNL---DP----LVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLG 1410 (1513)
Q Consensus 1338 ~isiVpQdp~LF~gTIR~NL---dp----~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LA 1410 (1513)
+|++-.|.-+=| ..-|. |. +..-++||+.+.|...|+...+...+ -..||||||-|+++|
T Consensus 428 ri~~f~Qhhvd~---l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g~la~~s----------i~~LSGGQKsrvafA 494 (582)
T KOG0062|consen 428 RIKYFAQHHVDF---LDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSGELALQS----------IASLSGGQKSRVAFA 494 (582)
T ss_pred eecchhHhhhhH---HHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCchhhhcc----------ccccCCcchhHHHHH
Confidence 999999977643 22332 11 22348999999999998876543321 146999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeE
Q 000432 1411 RTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAE 1476 (1513)
Q Consensus 1411 RALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE 1476 (1513)
-....+|.+|||||||..||.++-..+-++|+. |+| -||+|+|+.+.|.. |+.++|.++|+|.-
T Consensus 495 ~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~-F~G-GVv~VSHd~~fi~~~c~E~Wvve~g~vt~ 559 (582)
T KOG0062|consen 495 ACTWNNPHLLVLDEPTNHLDRDSLGALAKALKN-FNG-GVVLVSHDEEFISSLCKELWVVEDGKVTP 559 (582)
T ss_pred HHhcCCCcEEEecCCCccccHHHHHHHHHHHHh-cCC-cEEEEECcHHHHhhcCceeEEEcCCcEEe
Confidence 999999999999999999999999999999975 555 79999999999987 99999999999976
No 122
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.5e-41 Score=381.77 Aligned_cols=219 Identities=35% Similarity=0.560 Sum_probs=202.3
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhce
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRL 1339 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~i 1339 (1513)
|.|+++|++++|+....++|+|+||+|++||.+||+|++|||||||+++|.|+.+|++|+|.+||.++...+...+|+++
T Consensus 1 ~~l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 1 GRIEFRNVSFSYPNQEIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred CeEEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 46899999999965334599999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEcCCCccccCcHhhccCCC-CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCC
Q 000432 1340 GIIPQDPTLFDGTVRGNLDPL-VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSS 1418 (1513)
Q Consensus 1340 siVpQdp~LF~gTIR~NLdp~-~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ 1418 (1513)
+++||+|.+|..|+++|+... ...+++++.++++..++.+.....|.|+++.+.+...+||||||||++||||++.+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999754 2345667889999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEec
Q 000432 1419 ILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1419 ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~G 1478 (1513)
+|||||||++||.++...+.+.|++..+++|+|+++|+++.+..||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 999999999999999999999999876668999999999988789999999999998765
No 123
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.6e-42 Score=362.42 Aligned_cols=201 Identities=29% Similarity=0.476 Sum_probs=170.4
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------- 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------- 696 (1513)
-|+++|++.+|.. ..+|+|||++|++||.++|||||||||||||++|.|+-+|++|+|.++|.
T Consensus 2 mi~i~~l~K~fg~---~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFGD---KEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeCC---eEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 4889999999963 57999999999999999999999999999999999999999999999993
Q ss_pred EEEEcCCCcccC-ccHHHHHccCC----CCCch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHH
Q 000432 697 KAYVPQSPWILT-GNIRENILFGN----QYDSC----KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQI 767 (1513)
Q Consensus 697 ~ayv~Q~~~l~~-~ti~eNI~fg~----~~~~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~l 767 (1513)
+|+|+|+.-||. -||-|||..+. ..+++ +-.+.++..+|.+-.+.. ...|||||||||||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~y-----------P~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAY-----------PAQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhC-----------ccccCcHHHHHHHH
Confidence 479999999995 59999999873 22221 222333444444444443 46899999999999
Q ss_pred HHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000432 768 ARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGI-LKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 768 ARal~~~~~illLDep~salD~~~~~~i~~~~~~~~-~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
||||.-+|+++|+|||||||||+...++.+ ++..+ ..|.|.|+|||.+.|.+. ||+|+.|++|+|+++|+++++..+
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~-vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~ 226 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLD-VMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDN 226 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHH-HHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999888875 45444 468999999999999987 999999999999999999999765
Q ss_pred C
Q 000432 846 N 846 (1513)
Q Consensus 846 ~ 846 (1513)
.
T Consensus 227 p 227 (240)
T COG1126 227 P 227 (240)
T ss_pred C
Confidence 3
No 124
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-41 Score=400.43 Aligned_cols=217 Identities=26% Similarity=0.387 Sum_probs=185.6
Q ss_pred ceEEEEEEEEEEcCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCC------
Q 000432 1260 GTISFHNLQIRYAEHL---PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKI------ 1330 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i------ 1330 (1513)
..|+++|++|+|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.+.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 4699999999997432 3599999999999999999999999999999999999999999999999998753
Q ss_pred ----------ChHHhhhceEEEcCCC--ccccCcHhhccCCCC---CCCHHH----HHHHHHHcCCcHHHHhhhccccch
Q 000432 1331 ----------GLHDLRSRLGIIPQDP--TLFDGTVRGNLDPLV---QYSDKQ----VWEALDKCQLGDLVRAKEEKLDST 1391 (1513)
Q Consensus 1331 ----------~l~~LR~~isiVpQdp--~LF~gTIR~NLdp~~---~~sdee----i~~aL~~~~l~~~I~~lp~gLdt~ 1391 (1513)
+...+|+++++|||+| .+|++|+++|+.+.. ..++++ +.++++.+++.+ ..
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~ 169 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDD----------SY 169 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCCh----------hH
Confidence 3567899999999998 699999999996431 233333 333444444421 23
Q ss_pred hccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hcCEEEEE
Q 000432 1392 VAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVI-DSDLVLVL 1469 (1513)
Q Consensus 1392 V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~-~~DrIlVL 1469 (1513)
....+.+||||||||++|||||+++|+||||||||++||+.+.+.+.+.|++.. +++|||+|||+++.+. .||||+||
T Consensus 170 ~~~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl 249 (320)
T PRK13631 170 LERSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVM 249 (320)
T ss_pred hcCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEE
Confidence 456678999999999999999999999999999999999999999999998753 5899999999999875 59999999
Q ss_pred eCCEEeEecChhHHHhc
Q 000432 1470 SDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1470 d~G~IvE~Gtp~eLl~~ 1486 (1513)
++|++++.|+|+++.++
T Consensus 250 ~~G~i~~~g~~~~~~~~ 266 (320)
T PRK13631 250 DKGKILKTGTPYEIFTD 266 (320)
T ss_pred ECCEEEEeCCHHHHhcC
Confidence 99999999999998765
No 125
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-41 Score=366.92 Aligned_cols=224 Identities=28% Similarity=0.430 Sum_probs=189.1
Q ss_pred eEEEEEEEEEEcCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCC-ChHHhhh
Q 000432 1261 TISFHNLQIRYAEHL--PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKI-GLHDLRS 1337 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i-~l~~LR~ 1337 (1513)
.++++|+++.|+.+. .++|+||||+|.+||.+||||+||||||||.++|.|+.+|++|+|.+||.+.... +-+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 488999999997653 1499999999999999999999999999999999999999999999999766553 3335788
Q ss_pred ceEEEcCCCcc-c--cCcHhhccC-CCC----CCCHHHHHHHHHHcCCcHH-HHhhhccccchhccCCCCCChhHHHHHH
Q 000432 1338 RLGIIPQDPTL-F--DGTVRGNLD-PLV----QYSDKQVWEALDKCQLGDL-VRAKEEKLDSTVAENGENWSVGQRQLFC 1408 (1513)
Q Consensus 1338 ~isiVpQdp~L-F--~gTIR~NLd-p~~----~~sdeei~~aL~~~~l~~~-I~~lp~gLdt~V~e~G~nLSgGQRQrl~ 1408 (1513)
.+.+|+|||.- + .-||++-|. |.. .-..++++++|+.+|+.+- ..+.| ..||||||||+|
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~l~R~P-----------~eLSGGQ~QRia 151 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSFLDRRP-----------HELSGGQRQRIA 151 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHHHhcCc-----------hhcChhHHHHHH
Confidence 99999999972 2 236666663 332 2235669999999999754 44445 358999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCc--EEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHh
Q 000432 1409 LGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDR--TVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1409 LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~--TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
|||||.-+|++||||||||+||.-..+.|.+.+.+..+++ |.|+|+|+++.+.. ||||+||++|+++|.++-.++..
T Consensus 152 IARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 152 IARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 9999999999999999999999999999999998876655 99999999999988 99999999999999999999998
Q ss_pred cCChHHHHHH
Q 000432 1486 REDSFFSQLI 1495 (1513)
Q Consensus 1486 ~~~~~f~~l~ 1495 (1513)
.+...|.+..
T Consensus 232 ~~~h~ytr~L 241 (252)
T COG1124 232 HPSHPYTREL 241 (252)
T ss_pred CCccHHHHHH
Confidence 7555555433
No 126
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2e-41 Score=362.15 Aligned_cols=225 Identities=27% Similarity=0.496 Sum_probs=198.4
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHH---hh
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHD---LR 1336 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~---LR 1336 (1513)
-.|++++|+++|.+. .||+||||+|++||.+||+|+||||||||++++.|+..|++|+|.|+|.||.+++-++ +|
T Consensus 7 ~~I~vr~v~~~fG~~--~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 7 PLIEVRGVTKSFGDR--VILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred ceEEEeeeeeecCCE--EEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 479999999999754 5999999999999999999999999999999999999999999999999999998754 69
Q ss_pred hceEEEcCCCccccC-cHhhccC-CCCC---CCHHHHH----HHHHHcCCcHH-HHhhhccccchhccCCCCCChhHHHH
Q 000432 1337 SRLGIIPQDPTLFDG-TVRGNLD-PLVQ---YSDKQVW----EALDKCQLGDL-VRAKEEKLDSTVAENGENWSVGQRQL 1406 (1513)
Q Consensus 1337 ~~isiVpQdp~LF~g-TIR~NLd-p~~~---~sdeei~----~aL~~~~l~~~-I~~lp~gLdt~V~e~G~nLSgGQRQr 1406 (1513)
+++|+++|..-||+. ||+||+. |..+ .+++++. .-|+.+||... .+.+| +.||||.|.|
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~KR 153 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMRKR 153 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHHHH
Confidence 999999999999976 9999997 4444 4455544 45778888876 34444 4689999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHH
Q 000432 1407 FCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKL 1483 (1513)
Q Consensus 1407 l~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eL 1483 (1513)
++||||+.-+|+|+++|||||+||+.+...+-+.|++.- -+.|+++|||+++++.. ||||+++.+|+|+-.|+++||
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999988887654 37899999999999988 899999999999999999999
Q ss_pred HhcCChHHHHHHHH
Q 000432 1484 LEREDSFFSQLIKE 1497 (1513)
Q Consensus 1484 l~~~~~~f~~l~~~ 1497 (1513)
.+.++-+.++.++-
T Consensus 234 ~~sd~P~v~qf~~G 247 (263)
T COG1127 234 LASDDPWVRQFFNG 247 (263)
T ss_pred HhCCCHHHHHHhcC
Confidence 99877776666553
No 127
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.5e-41 Score=383.69 Aligned_cols=211 Identities=30% Similarity=0.535 Sum_probs=186.6
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccC-----CCCCcEEEEcCeeCCCCC--hHH
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIV-----EPTMGSIIIDNVDITKIG--LHD 1334 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~-----ep~~G~I~IDGvdI~~i~--l~~ 1334 (1513)
|+++||+++|+.. ++|+|+||+|++||++||+|+||||||||+++|.|++ +|++|+|.+||.++.+++ ...
T Consensus 1 i~~~~l~~~~~~~--~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 78 (227)
T cd03260 1 IELRDLNVYYGDK--HALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLE 78 (227)
T ss_pred CEEEEEEEEcCCc--eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHH
Confidence 5789999999653 5999999999999999999999999999999999999 999999999999998877 667
Q ss_pred hhhceEEEcCCCccccCcHhhccCCCC---C-C----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHH
Q 000432 1335 LRSRLGIIPQDPTLFDGTVRGNLDPLV---Q-Y----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQL 1406 (1513)
Q Consensus 1335 LR~~isiVpQdp~LF~gTIR~NLdp~~---~-~----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQr 1406 (1513)
+|++++++||++.+|..|+++|+.... . . .++++.++++..++.+...+.++ +.+||||||||
T Consensus 79 ~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~qr 149 (227)
T cd03260 79 LRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQR 149 (227)
T ss_pred HHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHHH
Confidence 889999999999999889999996421 1 1 23567888888888765544321 46899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHH
Q 000432 1407 FCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKL 1483 (1513)
Q Consensus 1407 l~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eL 1483 (1513)
++||||++++|++|+|||||++||+++.+.+.+.|++..+++|+|+++|+++.+.. ||+|++|++|++++.|+++++
T Consensus 150 v~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 150 LCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 99999999999999999999999999999999999987656899999999999876 999999999999999998764
No 128
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-41 Score=384.13 Aligned_cols=212 Identities=30% Similarity=0.454 Sum_probs=186.3
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCh---HHhhhc
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGL---HDLRSR 1338 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l---~~LR~~ 1338 (1513)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~ 78 (235)
T cd03261 1 IELRGLTKSFGG--RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRR 78 (235)
T ss_pred CeEEEEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcc
Confidence 578999999964 359999999999999999999999999999999999999999999999999988764 567899
Q ss_pred eEEEcCCCccccC-cHhhccCCC----CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHH
Q 000432 1339 LGIIPQDPTLFDG-TVRGNLDPL----VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCL 1409 (1513)
Q Consensus 1339 isiVpQdp~LF~g-TIR~NLdp~----~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~L 1409 (1513)
+++|||++.+|.+ |+++|+... ...+ ++++.++++.+++.++..+.| .+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~i 147 (235)
T cd03261 79 MGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYP-----------AELSGGMKKRVAL 147 (235)
T ss_pred eEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHH
Confidence 9999999999986 999999642 1123 234677888888766543322 4699999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1410 GRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1410 ARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
||||+++|+||||||||++||+.+.+.+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 148 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 148 ARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred HHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 9999999999999999999999999999999988653 7899999999999876 999999999999999999998865
No 129
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.2e-41 Score=390.13 Aligned_cols=216 Identities=28% Similarity=0.441 Sum_probs=196.2
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++||+.+|++.. ||+|+|++|+.||.++++||||||||||+++|.|+.+|++|+|.|||.|++++++++ +.|+
T Consensus 3 ~i~l~~v~K~yg~~~--~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~ia 78 (338)
T COG3839 3 ELELKNVRKSFGSFE--VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIA 78 (338)
T ss_pred EEEEeeeEEEcCCce--eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEE
Confidence 589999999998653 999999999999999999999999999999999999999999999999999999887 7899
Q ss_pred EEcCCCccccC-cHhhccCCCCC-------CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHH
Q 000432 1341 IIPQDPTLFDG-TVRGNLDPLVQ-------YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRT 1412 (1513)
Q Consensus 1341 iVpQdp~LF~g-TIR~NLdp~~~-------~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARA 1412 (1513)
+|+|+..||.. ||++||.+.-. --++++.++++..++.+..++.|. .||||||||++||||
T Consensus 79 mVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P~-----------~LSGGQrQRVAlaRA 147 (338)
T COG3839 79 MVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKPL-----------QLSGGQRQRVALARA 147 (338)
T ss_pred EEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCcc-----------cCChhhHHHHHHHHH
Confidence 99999999965 99999975321 236678899999999999888874 579999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCCh
Q 000432 1413 LLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLEREDS 1489 (1513)
Q Consensus 1413 LLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~~ 1489 (1513)
|.++|++++||||.|+||++....+...|++..+ +.|+|.|||+-...+. +|||.||++|+|.+.|+|.|+.+++..
T Consensus 148 lVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P~n 227 (338)
T COG3839 148 LVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERPAN 227 (338)
T ss_pred HhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCccc
Confidence 9999999999999999999999998888877543 5799999999888776 999999999999999999999998876
Q ss_pred HH
Q 000432 1490 FF 1491 (1513)
Q Consensus 1490 ~f 1491 (1513)
.|
T Consensus 228 ~f 229 (338)
T COG3839 228 LF 229 (338)
T ss_pred hh
Confidence 55
No 130
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2.5e-41 Score=375.83 Aligned_cols=213 Identities=30% Similarity=0.494 Sum_probs=189.1
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.++++|++|+|+. .++|+|+||+|++||.++|+||+|||||||+++|.|+..|.+|+|.+||.|+.+++.+++-++++
T Consensus 2 ~L~~~~ls~~y~~--~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia 79 (258)
T COG1120 2 MLEVENLSFGYGG--KPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLA 79 (258)
T ss_pred eeEEEEEEEEECC--eeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEE
Confidence 4789999999974 46999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCc-cccCcHhhccC----C----CCCCC--H-HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHH
Q 000432 1341 IIPQDPT-LFDGTVRGNLD----P----LVQYS--D-KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFC 1408 (1513)
Q Consensus 1341 iVpQdp~-LF~gTIR~NLd----p----~~~~s--d-eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~ 1408 (1513)
||||++. -|.-|++|=+. | +...+ | +.+.+||+.+++.++..+ .+ ..||||||||++
T Consensus 80 ~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r-------~~----~~LSGGerQrv~ 148 (258)
T COG1120 80 YVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADR-------PV----DELSGGERQRVL 148 (258)
T ss_pred EeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcC-------cc----cccChhHHHHHH
Confidence 9999975 45668888763 2 12222 3 357889999999887643 22 459999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhH-hhcCEEEEEeCCEEeEecChhHHHh
Q 000432 1409 LGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTV-IDSDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1409 LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti-~~~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
|||||.++|+||+||||||+||....-.|.+.+++.. +++|+|++.|+++.. +.||++++|++|+|+..|+|+|.+.
T Consensus 149 iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT 228 (258)
T COG1120 149 IARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLT 228 (258)
T ss_pred HHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcC
Confidence 9999999999999999999999999999999999876 369999999999865 6699999999999999999999987
Q ss_pred c
Q 000432 1486 R 1486 (1513)
Q Consensus 1486 ~ 1486 (1513)
.
T Consensus 229 ~ 229 (258)
T COG1120 229 E 229 (258)
T ss_pred H
Confidence 5
No 131
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.4e-41 Score=373.82 Aligned_cols=209 Identities=30% Similarity=0.451 Sum_probs=184.6
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++|++|+|+.. + ||+||||+|++||.+||+||+|||||||+++++|+..|++|+|.++|.++++... |.+||
T Consensus 4 ~i~v~nl~v~y~~~-~-vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~Ig 78 (254)
T COG1121 4 MIEVENLTVSYGNR-P-VLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIG 78 (254)
T ss_pred EEEEeeeEEEECCE-e-eeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEE
Confidence 59999999999865 4 9999999999999999999999999999999999999999999999998876433 57999
Q ss_pred EEcCCC---ccccCcHhhccCCCC-----------CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHH
Q 000432 1341 IIPQDP---TLFDGTVRGNLDPLV-----------QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQL 1406 (1513)
Q Consensus 1341 iVpQdp---~LF~gTIR~NLdp~~-----------~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQr 1406 (1513)
||||.. .-|.-||+|=+..+. ..+.+++.+||+++++.++. |-+++ .|||||+||
T Consensus 79 YVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~-------~r~i~----~LSGGQ~QR 147 (254)
T COG1121 79 YVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLR-------DRQIG----ELSGGQKQR 147 (254)
T ss_pred EcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhh-------CCccc----ccCcHHHHH
Confidence 999965 358889999875321 12347899999999999875 34555 499999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1407 FCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK-DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1407 l~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~-~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
+.|||||+++|++|+|||||++||+.++..|.+.|++..+ ||||++|+|+++.+++ ||+|+.|+ +++...|+|++.+
T Consensus 148 V~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~~ 226 (254)
T COG1121 148 VLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEVL 226 (254)
T ss_pred HHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhcc
Confidence 9999999999999999999999999999999999988764 8999999999999987 99999985 6788999999998
Q ss_pred hc
Q 000432 1485 ER 1486 (1513)
Q Consensus 1485 ~~ 1486 (1513)
+.
T Consensus 227 ~~ 228 (254)
T COG1121 227 TE 228 (254)
T ss_pred CH
Confidence 75
No 132
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.5e-41 Score=376.69 Aligned_cols=215 Identities=29% Similarity=0.496 Sum_probs=196.3
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCC-CCChHHhhhce
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDIT-KIGLHDLRSRL 1339 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~-~i~l~~LR~~i 1339 (1513)
.|+++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.+++ ..+...+|+++
T Consensus 3 ~i~~~~l~~~y~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~v 81 (235)
T COG1122 3 MIEAENLSFRYPGR-KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKV 81 (235)
T ss_pred eEEEEEEEEEcCCC-ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcce
Confidence 58999999999887 67999999999999999999999999999999999999999999999999999 48899999999
Q ss_pred EEEcCCC--ccccCcHhhccCCCC---CCCHH----HHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHH
Q 000432 1340 GIIPQDP--TLFDGTVRGNLDPLV---QYSDK----QVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLG 1410 (1513)
Q Consensus 1340 siVpQdp--~LF~gTIR~NLdp~~---~~sde----ei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LA 1410 (1513)
|+|.|+| .+|..||.+.+.+.. ..+.+ .+.++|+.+++.++-..-| .+||||||||+|||
T Consensus 82 G~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~p-----------~~LSGGqkqRvaIA 150 (235)
T COG1122 82 GLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRPP-----------FNLSGGQKQRVAIA 150 (235)
T ss_pred EEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCCc-----------cccCCcceeeHHhh
Confidence 9999999 799999999998642 34443 4778999999988744433 57999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcC
Q 000432 1411 RTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLERE 1487 (1513)
Q Consensus 1411 RALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~ 1487 (1513)
.+|..+|+|||||||||+||+...+.+.+.+++..+ ++|+|+|+|+++.+.+ |||++||++|+++..|+|+++.++.
T Consensus 151 ~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~~ 230 (235)
T COG1122 151 GVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFNDA 230 (235)
T ss_pred HHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhhh
Confidence 999999999999999999999999999999998764 4799999999999998 9999999999999999999998863
No 133
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-41 Score=382.24 Aligned_cols=218 Identities=24% Similarity=0.417 Sum_probs=194.1
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC---CCCcEEEEcCeeCCCCChHHhhh
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE---PTMGSIIIDNVDITKIGLHDLRS 1337 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e---p~~G~I~IDGvdI~~i~l~~LR~ 1337 (1513)
.|+++|++++|+. +++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.|+.+.+...+|+
T Consensus 2 ~~~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 79 (246)
T PRK14269 2 IAKTTNLNLFYGK--KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRK 79 (246)
T ss_pred ceeeeeeEEEECC--EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhh
Confidence 4789999999964 359999999999999999999999999999999999985 69999999999999988888999
Q ss_pred ceEEEcCCCccccCcHhhccCCCC---C------CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHH
Q 000432 1338 RLGIIPQDPTLFDGTVRGNLDPLV---Q------YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFC 1408 (1513)
Q Consensus 1338 ~isiVpQdp~LF~gTIR~NLdp~~---~------~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~ 1408 (1513)
+++|+||+|.+|..|+++|+.+.. . ..++++.++++.+++.+++..+ ..+.+.+||||||||++
T Consensus 80 ~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G~~qrv~ 152 (246)
T PRK14269 80 NVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDK-------LKQNALALSGGQQQRLC 152 (246)
T ss_pred hEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHH-------hcCCcccCCHHHHHHHH
Confidence 999999999999999999996421 1 1234577889999987665432 34456789999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcC
Q 000432 1409 LGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLERE 1487 (1513)
Q Consensus 1409 LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~ 1487 (1513)
||||++++|+||+|||||++||.++...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 153 laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 232 (246)
T PRK14269 153 IARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFENP 232 (246)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhCC
Confidence 999999999999999999999999999999999987778999999999998865 9999999999999999999998754
No 134
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=379.55 Aligned_cols=222 Identities=32% Similarity=0.502 Sum_probs=194.3
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.|+...+..++|++++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 80 (241)
T PRK14250 3 EIEFKEVSYSSFG--KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIG 80 (241)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEE
Confidence 4899999999964 35999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEcCCCccccCcHhhccCCCC---CCCHHHHHHHHHHcCCc-HHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccC
Q 000432 1341 IIPQDPTLFDGTVRGNLDPLV---QYSDKQVWEALDKCQLG-DLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKK 1416 (1513)
Q Consensus 1341 iVpQdp~LF~gTIR~NLdp~~---~~sdeei~~aL~~~~l~-~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~ 1416 (1513)
++||+|.+|+.|+++|+.... ...++++.+.++..++. +.. .....+||||||||++||||++++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 81 MVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYA-----------TRDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHh-----------hCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999999999999997431 22345677888888775 222 234567999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCChHHHH
Q 000432 1417 SSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLEREDSFFSQ 1493 (1513)
Q Consensus 1417 ~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~ 1493 (1513)
|++|||||||++||.++...+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|+++++..++...|.+
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 229 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTNPQNEVTK 229 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcCCCcHHHH
Confidence 99999999999999999999999998764 37899999999999876 9999999999999999999998765444544
Q ss_pred HH
Q 000432 1494 LI 1495 (1513)
Q Consensus 1494 l~ 1495 (1513)
.+
T Consensus 230 ~~ 231 (241)
T PRK14250 230 LF 231 (241)
T ss_pred HH
Confidence 33
No 135
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9e-41 Score=387.99 Aligned_cols=215 Identities=28% Similarity=0.433 Sum_probs=192.0
Q ss_pred eEEEEEEEEEEcCC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhce
Q 000432 1261 TISFHNLQIRYAEH-LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRL 1339 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~i 1339 (1513)
.|+++||+++|+.. ..++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999743 24599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEcCCC--ccccCcHhhccCCCC---CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHH
Q 000432 1340 GIIPQDP--TLFDGTVRGNLDPLV---QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLG 1410 (1513)
Q Consensus 1340 siVpQdp--~LF~gTIR~NLdp~~---~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LA 1410 (1513)
+++||+| .++..||++||.+.. ..+ ++++.++++.+++.++....| .+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----------ARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 9999998 366789999997431 123 356788999999877655443 57999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhc
Q 000432 1411 RTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1411 RALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
|||+++|+||||||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+..||||++|++|++++.|+++++.+.
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999988653 7999999999999988999999999999999999998765
No 136
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=1.2e-40 Score=376.07 Aligned_cols=217 Identities=30% Similarity=0.477 Sum_probs=198.8
Q ss_pred CCceEEEEEEEEEEcCC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhh
Q 000432 1258 DVGTISFHNLQIRYAEH-LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLR 1336 (1513)
Q Consensus 1258 ~~g~I~f~nvsf~Y~~~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR 1336 (1513)
..|.|+++|++++|+.. ..++|+|+||+|++||++||+|++|||||||+++|+|+++|++|+|.+||.++...+....|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 35789999999999753 23599999999999999999999999999999999999999999999999999888888888
Q ss_pred hceEEEcCCCccccCcHhhccCCC-CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHcc
Q 000432 1337 SRLGIIPQDPTLFDGTVRGNLDPL-VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLK 1415 (1513)
Q Consensus 1337 ~~isiVpQdp~LF~gTIR~NLdp~-~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr 1415 (1513)
++++++||+|.+|++|+++|++.. ...+.+++++..+..++.++++.+|.|+++.+.+...+||||||||++||||+++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 999999999999999999999853 3344556777777788899999999899999999999999999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEE
Q 000432 1416 KSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRI 1474 (1513)
Q Consensus 1416 ~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~I 1474 (1513)
+|++|||||||++||+++.+.+.+.|++..+++|+|+|+|+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999987777999999999999989999999999975
No 137
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-40 Score=395.95 Aligned_cols=224 Identities=28% Similarity=0.427 Sum_probs=192.1
Q ss_pred EEEEEEEEEEcC--CCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHH---hh
Q 000432 1262 ISFHNLQIRYAE--HLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHD---LR 1336 (1513)
Q Consensus 1262 I~f~nvsf~Y~~--~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~---LR 1336 (1513)
|+++||+++|+. +..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++..+ +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 789999999972 2346999999999999999999999999999999999999999999999999999887654 47
Q ss_pred hceEEEcCCCcccc-CcHhhccCCC---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHH
Q 000432 1337 SRLGIIPQDPTLFD-GTVRGNLDPL---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFC 1408 (1513)
Q Consensus 1337 ~~isiVpQdp~LF~-gTIR~NLdp~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~ 1408 (1513)
++++||||++.+|. .|+++|+... ...+ ++++.++++..++.++..+. ..+||||||||++
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGq~qRv~ 150 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRY-----------PAQLSGGQKQRVA 150 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHHHH
Confidence 89999999999986 6999999642 1222 24567788888876654332 3579999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHh
Q 000432 1409 LGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1409 LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
|||||+++|+||+|||||++||+.+...+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~ 230 (343)
T PRK11153 151 IARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFS 230 (343)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999998653 7899999999999877 99999999999999999999987
Q ss_pred cCChHH-HHHHH
Q 000432 1486 REDSFF-SQLIK 1496 (1513)
Q Consensus 1486 ~~~~~f-~~l~~ 1496 (1513)
++...+ +.++.
T Consensus 231 ~~~~~~~~~~~~ 242 (343)
T PRK11153 231 HPKHPLTREFIQ 242 (343)
T ss_pred CCCcHHHHHHHh
Confidence 654333 33443
No 138
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-40 Score=395.13 Aligned_cols=217 Identities=22% Similarity=0.359 Sum_probs=192.0
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++|++++|+.+ ..+|+|+||+|++||.+||+||||||||||+++|.|+.+|++|+|.+||.++.+++.+ +++|+
T Consensus 3 ~l~i~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig 79 (356)
T PRK11650 3 GLKLQAVRKSYDGK-TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIA 79 (356)
T ss_pred EEEEEeEEEEeCCC-CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 48999999999433 3599999999999999999999999999999999999999999999999999987765 47899
Q ss_pred EEcCCCcccc-CcHhhccCCCC---CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHH
Q 000432 1341 IIPQDPTLFD-GTVRGNLDPLV---QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRT 1412 (1513)
Q Consensus 1341 iVpQdp~LF~-gTIR~NLdp~~---~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARA 1412 (1513)
||||++.+|. .|+++|+.+.. ..+ ++++.++++.+++.++..+.| .+||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRvalARA 148 (356)
T PRK11650 80 MVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----------RELSGGQRQRVAMGRA 148 (356)
T ss_pred EEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 9999999996 59999997431 123 245778899999988766655 4799999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCCh
Q 000432 1413 LLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLEREDS 1489 (1513)
Q Consensus 1413 LLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~~ 1489 (1513)
|+++|+||+||||||+||..+...+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++..
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (356)
T PRK11650 149 IVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKPAS 228 (356)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCCcc
Confidence 9999999999999999999999999999987654 7899999999998865 999999999999999999999988765
Q ss_pred HH
Q 000432 1490 FF 1491 (1513)
Q Consensus 1490 ~f 1491 (1513)
.|
T Consensus 229 ~~ 230 (356)
T PRK11650 229 TF 230 (356)
T ss_pred HH
Confidence 44
No 139
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-40 Score=379.80 Aligned_cols=220 Identities=28% Similarity=0.452 Sum_probs=192.8
Q ss_pred CceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--CC
Q 000432 1259 VGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE-----PTMGSIIIDNVDITK--IG 1331 (1513)
Q Consensus 1259 ~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e-----p~~G~I~IDGvdI~~--i~ 1331 (1513)
.+.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 11 ~~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~ 88 (260)
T PRK10744 11 PSKIQVRNLNFYYGK--FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQD 88 (260)
T ss_pred CceEEEEEEEEEeCC--eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccc
Confidence 467999999999964 359999999999999999999999999999999999986 589999999999863 45
Q ss_pred hHHhhhceEEEcCCCccccCcHhhccCCC----CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhH
Q 000432 1332 LHDLRSRLGIIPQDPTLFDGTVRGNLDPL----VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQ 1403 (1513)
Q Consensus 1332 l~~LR~~isiVpQdp~LF~gTIR~NLdp~----~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQ 1403 (1513)
...+|++++|+||+|.+|..|+++|+... ...+ +++++++++.+++.+.+. ....+...+|||||
T Consensus 89 ~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq 161 (260)
T PRK10744 89 IALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVK-------DKLHQSGYSLSGGQ 161 (260)
T ss_pred hHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhH-------HHHhcCCCCCCHHH
Confidence 66789999999999999999999999642 1122 356788899888865443 23345667899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhH
Q 000432 1404 RQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTK 1482 (1513)
Q Consensus 1404 RQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~e 1482 (1513)
|||++||||++++|+||||||||++||.++.+.+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|++++
T Consensus 162 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 241 (260)
T PRK10744 162 QQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDT 241 (260)
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988677899999999999865 99999999999999999999
Q ss_pred HHhcC
Q 000432 1483 LLERE 1487 (1513)
Q Consensus 1483 Ll~~~ 1487 (1513)
+.+.+
T Consensus 242 ~~~~~ 246 (260)
T PRK10744 242 IFTKP 246 (260)
T ss_pred HHhCC
Confidence 98754
No 140
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.4e-40 Score=374.05 Aligned_cols=210 Identities=26% Similarity=0.384 Sum_probs=183.7
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++||+++|+++..++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.... .++|+++++
T Consensus 1 l~~~~l~~~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKGTKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCCCceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEEE
Confidence 5799999999753245999999999999999999999999999999999999999999999999997643 667889999
Q ss_pred EcCCCccc-cCcHhhccCCCC---CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1342 IPQDPTLF-DGTVRGNLDPLV---QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1342 VpQdp~LF-~gTIR~NLdp~~---~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+||+|.+| ..|+++|+.... ..+ ++++.++++..++.+.. ++. ..+||+|||||++||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~----~~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKA-------NKR----ARTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHH-------hCh----hhhCCHHHHHHHHHHHHH
Confidence 99999998 579999996321 122 24567788888775543 233 247999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHH
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKL 1483 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eL 1483 (1513)
+++|++|+|||||++||+.+.+.+.+.|++..+++|+|+++|+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999999999999988778999999999999976 999999999999999999875
No 141
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.6e-40 Score=378.21 Aligned_cols=220 Identities=29% Similarity=0.480 Sum_probs=191.0
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCC-----CcEEEEcCeeCCCC--ChHH
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPT-----MGSIIIDNVDITKI--GLHD 1334 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~-----~G~I~IDGvdI~~i--~l~~ 1334 (1513)
|+++||+++|++. .+|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++... +...
T Consensus 2 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~ 79 (247)
T TIGR00972 2 IEIENLNLFYGEK--EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVE 79 (247)
T ss_pred EEEEEEEEEECCe--eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHH
Confidence 7899999999753 5999999999999999999999999999999999999998 99999999999763 4566
Q ss_pred hhhceEEEcCCCccccCcHhhccCCC---CC-CC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHH
Q 000432 1335 LRSRLGIIPQDPTLFDGTVRGNLDPL---VQ-YS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQL 1406 (1513)
Q Consensus 1335 LR~~isiVpQdp~LF~gTIR~NLdp~---~~-~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQr 1406 (1513)
.|++++|+||++.+|..|+++|+... .. .+ ++++.++++..++.++++. .......+||||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgG~~qr 152 (247)
T TIGR00972 80 LRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKD-------RLHDSALGLSGGQQQR 152 (247)
T ss_pred HHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhh-------HhhCCcccCCHHHHHH
Confidence 78999999999999999999999631 11 12 3467788888988754421 1233456899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHh
Q 000432 1407 FCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1407 l~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
++|||||+++|++++|||||++||+.+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 153 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (247)
T TIGR00972 153 LCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFT 232 (247)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667899999999999876 99999999999999999999987
Q ss_pred cCChH
Q 000432 1486 REDSF 1490 (1513)
Q Consensus 1486 ~~~~~ 1490 (1513)
++...
T Consensus 233 ~~~~~ 237 (247)
T TIGR00972 233 NPKEK 237 (247)
T ss_pred CCCCh
Confidence 64443
No 142
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-40 Score=384.77 Aligned_cols=212 Identities=25% Similarity=0.417 Sum_probs=188.9
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 4 ~l~~~~l~~~~~~~-~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 82 (274)
T PRK13647 4 IIEVEDLHFRYKDG-TKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVG 82 (274)
T ss_pred eEEEEEEEEEeCCC-CeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEE
Confidence 48999999999643 35999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEcCCC--ccccCcHhhccCCCC---CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHH
Q 000432 1341 IIPQDP--TLFDGTVRGNLDPLV---QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGR 1411 (1513)
Q Consensus 1341 iVpQdp--~LF~gTIR~NLdp~~---~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LAR 1411 (1513)
|+||+| .+|..|+++|+.+.. ..+ ++++.++++.+++.+...+.| ..||||||||++|||
T Consensus 83 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgG~~qrv~lar 151 (274)
T PRK13647 83 LVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----------YHLSYGQKKRVAIAG 151 (274)
T ss_pred EEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999998 688999999997421 122 356788899999877655544 369999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1412 TLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1412 ALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
||+++|++|+|||||++||+.+...+.+.|++.. +++|+|+++|+++.+.. ||||++|++|++++.|+++++.
T Consensus 152 aL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 226 (274)
T PRK13647 152 VLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLLT 226 (274)
T ss_pred HHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHhc
Confidence 9999999999999999999999999999998764 47999999999999865 9999999999999999987653
No 143
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-40 Score=386.35 Aligned_cols=217 Identities=30% Similarity=0.469 Sum_probs=187.1
Q ss_pred eEEEEEEEEEEcCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC--hHHh
Q 000432 1261 TISFHNLQIRYAEHL---PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIG--LHDL 1335 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~--l~~L 1335 (1513)
.|+++||+++|++.. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+++..+ ...+
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 388999999997532 36999999999999999999999999999999999999999999999999998754 4678
Q ss_pred hhceEEEcCCC--ccccCcHhhccCCCC---CCCH----HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHH
Q 000432 1336 RSRLGIIPQDP--TLFDGTVRGNLDPLV---QYSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQL 1406 (1513)
Q Consensus 1336 R~~isiVpQdp--~LF~gTIR~NLdp~~---~~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQr 1406 (1513)
|++++||||+| .+|+.|+++|+.+.. ..++ +++.++++.+++.. ++........||||||||
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~---------~~~~~~~~~~LSgGq~qr 152 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDY---------EDYKDKSPFELSGGQKRR 152 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCc---------hhhccCCcccCCHHHHHH
Confidence 99999999998 578999999996421 2333 34677888888751 011223346799999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHH
Q 000432 1407 FCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKL 1483 (1513)
Q Consensus 1407 l~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eL 1483 (1513)
++|||||+.+|+||||||||++||+.+...+.+.|++..+ +.|||+|+|+++.+.. ||||++|++|++++.|+++++
T Consensus 153 v~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~ 232 (287)
T PRK13637 153 VAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREV 232 (287)
T ss_pred HHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999988753 7899999999999865 999999999999999999998
Q ss_pred Hhc
Q 000432 1484 LER 1486 (1513)
Q Consensus 1484 l~~ 1486 (1513)
.+.
T Consensus 233 ~~~ 235 (287)
T PRK13637 233 FKE 235 (287)
T ss_pred HhC
Confidence 764
No 144
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=6.9e-41 Score=344.50 Aligned_cols=207 Identities=29% Similarity=0.426 Sum_probs=187.7
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHH---hhhc
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHD---LRSR 1338 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~---LR~~ 1338 (1513)
|+|+||+.+|+.+ +++|+||||+|++||.+-++|+||||||||+++|++...|++|+|.++|.|++++.-++ ||++
T Consensus 2 I~f~~V~k~Y~~g-~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~ 80 (223)
T COG2884 2 IRFENVSKAYPGG-REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQ 80 (223)
T ss_pred eeehhhhhhcCCC-chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhe
Confidence 8999999999887 77999999999999999999999999999999999999999999999999999988776 8999
Q ss_pred eEEEcCCCcccc-CcHhhccCC-CC--CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHH
Q 000432 1339 LGIIPQDPTLFD-GTVRGNLDP-LV--QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLG 1410 (1513)
Q Consensus 1339 isiVpQdp~LF~-gTIR~NLdp-~~--~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LA 1410 (1513)
||+|+||--|.. -|+.||+.+ .. ..+ .+++.++|+.+||.+-...+|. .|||||+||+|||
T Consensus 81 IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaIA 149 (223)
T COG2884 81 IGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAIA 149 (223)
T ss_pred eeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHHH
Confidence 999999998774 599999973 21 222 3467889999999999999884 5799999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhc-CEEEEEeCCEEeEecCh
Q 000432 1411 RTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVIDS-DLVLVLSDGRIAEYDSP 1480 (1513)
Q Consensus 1411 RALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~~-DrIlVLd~G~IvE~Gtp 1480 (1513)
||+..+|++|+-||||.+||+++...|.+.+.+.- .|.||++.||+.+.+.++ -|++.+++|+++..+.+
T Consensus 150 RAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 150 RAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 99999999999999999999999999999997754 589999999999999885 68999999999987665
No 145
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-40 Score=378.48 Aligned_cols=222 Identities=26% Similarity=0.402 Sum_probs=192.2
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCC--CChH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-----TMGSIIIDNVDITK--IGLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-----~~G~I~IDGvdI~~--i~l~ 1333 (1513)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 84 (254)
T PRK14273 7 IIETENLNLFYTD--FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDIL 84 (254)
T ss_pred eEEEeeeEEEeCC--ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHH
Confidence 6999999999964 3599999999999999999999999999999999999997 48999999999864 3456
Q ss_pred HhhhceEEEcCCCccccCcHhhccCCCC----CC----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1334 DLRSRLGIIPQDPTLFDGTVRGNLDPLV----QY----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~gTIR~NLdp~~----~~----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
.+|++++|+||+|.+|+.|+++|+.+.. .. .++++.++++.+++.+.+ ++.+|+ ...+|||||||
T Consensus 85 ~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~----~~~~LSgG~~q 157 (254)
T PRK14273 85 ELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDKLNT----NALSLSGGQQQ 157 (254)
T ss_pred HHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHHHhC----CcccCCHHHHH
Confidence 7889999999999999999999996421 11 245677888888876543 233444 45689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
|++|||||+++|++|||||||++||..+...+.+.|++..+++|+|+|+|+++.+.+ ||||++|++|++++.|+++++.
T Consensus 158 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 158 RLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELF 237 (254)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988778999999999999866 9999999999999999999998
Q ss_pred hcCChHH
Q 000432 1485 EREDSFF 1491 (1513)
Q Consensus 1485 ~~~~~~f 1491 (1513)
+++.-.|
T Consensus 238 ~~~~~~~ 244 (254)
T PRK14273 238 FNPKNTK 244 (254)
T ss_pred hCCCChH
Confidence 7654433
No 146
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-40 Score=378.90 Aligned_cols=219 Identities=24% Similarity=0.423 Sum_probs=191.2
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--CChH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE-----PTMGSIIIDNVDITK--IGLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e-----p~~G~I~IDGvdI~~--i~l~ 1333 (1513)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 83 (253)
T PRK14242 6 KMEARGLSFFYGD--FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVV 83 (253)
T ss_pred EEEEeeeEEEECC--eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999964 359999999999999999999999999999999999975 689999999999975 3456
Q ss_pred HhhhceEEEcCCCccccCcHhhccCCC----CC----CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1334 DLRSRLGIIPQDPTLFDGTVRGNLDPL----VQ----YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~gTIR~NLdp~----~~----~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
.+|++++|+||++.+|.+|+++|+... +. ..++++.++++.+++.+.+.. .......+|||||||
T Consensus 84 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~q 156 (253)
T PRK14242 84 ELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKD-------RLHESALGLSGGQQQ 156 (253)
T ss_pred HHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCHHHHH
Confidence 788999999999999999999999632 11 124567888999888765432 234456789999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
|++||||++++|+||+|||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14242 157 RLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667899999999999865 9999999999999999999998
Q ss_pred hcCC
Q 000432 1485 ERED 1488 (1513)
Q Consensus 1485 ~~~~ 1488 (1513)
+.+.
T Consensus 237 ~~~~ 240 (253)
T PRK14242 237 TRPR 240 (253)
T ss_pred cCCC
Confidence 7643
No 147
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-40 Score=384.20 Aligned_cols=215 Identities=25% Similarity=0.419 Sum_probs=192.7
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++||+++|+...+++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 5 ~l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (279)
T PRK13635 5 IIRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVG 84 (279)
T ss_pred eEEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheE
Confidence 48999999999754446999999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEcCCC--ccccCcHhhccCCCC---CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHH
Q 000432 1341 IIPQDP--TLFDGTVRGNLDPLV---QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGR 1411 (1513)
Q Consensus 1341 iVpQdp--~LF~gTIR~NLdp~~---~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LAR 1411 (1513)
|+||+| .+++.|+++||.... ..+ ++++.++++.+++.+++...| ..||||||||++|||
T Consensus 85 ~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qrv~lar 153 (279)
T PRK13635 85 MVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----------HRLSGGQKQRVAIAG 153 (279)
T ss_pred EEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 567789999997421 123 245778888888887766554 379999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhc
Q 000432 1412 TLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1412 ALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
||+.+|+||+|||||++||+.+...+.+.|++..+ ++|+|+++|+++.+..||+|++|++|++++.|+++++.+.
T Consensus 154 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 154 VLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999999998754 7899999999999999999999999999999999998765
No 148
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-40 Score=393.15 Aligned_cols=217 Identities=25% Similarity=0.399 Sum_probs=192.2
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhce
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRL 1339 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~i 1339 (1513)
..|+++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.+.+.+ |+++
T Consensus 5 ~~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 80 (351)
T PRK11432 5 NFVVLKNITKRFGS--NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDI 80 (351)
T ss_pred cEEEEEeEEEEECC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 46999999999964 3599999999999999999999999999999999999999999999999999887654 5789
Q ss_pred EEEcCCCccccC-cHhhccCCC-C--CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHH
Q 000432 1340 GIIPQDPTLFDG-TVRGNLDPL-V--QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGR 1411 (1513)
Q Consensus 1340 siVpQdp~LF~g-TIR~NLdp~-~--~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LAR 1411 (1513)
++|+|++.||.. |+++|+.+. . ..+ ++++.++++..++.++..+.| ..||||||||++|||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----------~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYV-----------DQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999965 999999742 1 122 356788999999877654443 479999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCC
Q 000432 1412 TLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLERED 1488 (1513)
Q Consensus 1412 ALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~ 1488 (1513)
||+++|+||+||||||+||+.+...+++.|++..+ ++|+|+|||+.+.+.. ||||+||++|+|++.|+|+++.+++.
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p~ 229 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQPA 229 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCC
Confidence 99999999999999999999999999999988754 7899999999999866 99999999999999999999998876
Q ss_pred hHH
Q 000432 1489 SFF 1491 (1513)
Q Consensus 1489 ~~f 1491 (1513)
..|
T Consensus 230 ~~~ 232 (351)
T PRK11432 230 SRF 232 (351)
T ss_pred chH
Confidence 544
No 149
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=2.5e-40 Score=367.36 Aligned_cols=199 Identities=25% Similarity=0.413 Sum_probs=183.5
Q ss_pred EEEEEEEEEEcCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhc
Q 000432 1262 ISFHNLQIRYAEHL---PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSR 1338 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~ 1338 (1513)
|+++||+++|++.. +++|+|+||+|++||.++|+|++|||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 57999999997642 3699999999999999999999999999999999999999999999999 6
Q ss_pred eEEEcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCC
Q 000432 1339 LGIIPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSS 1418 (1513)
Q Consensus 1339 isiVpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ 1418 (1513)
++|+||+|.+|++|+++|+.+....++++.+++++.+++.+++..+|.|+++.+.+.+.+||+|||||++||||++++|+
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~ 147 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDAD 147 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998765566778889999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHH-HHHHhc-CCcEEEEeccChhhHhhcCEEEEEeCCE
Q 000432 1419 ILVLDEATASVDSATDGVIQK-IISQEF-KDRTVVTIAHRIHTVIDSDLVLVLSDGR 1473 (1513)
Q Consensus 1419 ILiLDEaTSslD~~Te~~Iq~-~i~~~~-~~~TvI~IAHRl~ti~~~DrIlVLd~G~ 1473 (1513)
+++|||||++||.++.+.+.+ .+++.. +++|||+++|+++.+..||+|++|++|+
T Consensus 148 llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 148 IYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred EEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 999999999999999877766 566554 3689999999999999999999999985
No 150
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-40 Score=354.84 Aligned_cols=221 Identities=27% Similarity=0.414 Sum_probs=193.7
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC---hHHhhh
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIG---LHDLRS 1337 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~---l~~LR~ 1337 (1513)
.|+++||+.+|+.+ ..+|+||||+|++||.|||+|+||||||||+++|.|+.+|++|+|.++|.++.... ++++|+
T Consensus 3 ~i~~~nl~k~yp~~-~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~ 81 (258)
T COG3638 3 MIEVKNLSKTYPGG-HQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRR 81 (258)
T ss_pred eEEEeeeeeecCCC-ceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHH
Confidence 58999999999754 46999999999999999999999999999999999999999999999999999988 777889
Q ss_pred ceEEEcCCCccccC-cHhhccCC------------CCCCCH---HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCCh
Q 000432 1338 RLGIIPQDPTLFDG-TVRGNLDP------------LVQYSD---KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSV 1401 (1513)
Q Consensus 1338 ~isiVpQdp~LF~g-TIR~NLdp------------~~~~sd---eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSg 1401 (1513)
++|+|+|.+-|-.. |+-+|+.. ++-++. .+..+||+++++.|..-. +.++|||
T Consensus 82 ~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~q-----------ra~~LSG 150 (258)
T COG3638 82 DIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQ-----------RASTLSG 150 (258)
T ss_pred hceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHH-----------HhccCCc
Confidence 99999999998765 89999731 233443 457889999999877543 3468999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEec
Q 000432 1402 GQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1402 GQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~G 1478 (1513)
||+||++|||||.++|+|++=|||||+||+++.+.|++.|++.. .|.|||+.-|.++..+. ||||+-|++|+|+-.|
T Consensus 151 GQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg 230 (258)
T COG3638 151 GQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDG 230 (258)
T ss_pred chhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeC
Confidence 99999999999999999999999999999999999999998765 57899999999999876 9999999999999999
Q ss_pred ChhHHHhcCChHHHHHHH
Q 000432 1479 SPTKLLEREDSFFSQLIK 1496 (1513)
Q Consensus 1479 tp~eLl~~~~~~f~~l~~ 1496 (1513)
+++||-+ ..+.+.|.
T Consensus 231 ~~~el~~---~~~~~iYg 245 (258)
T COG3638 231 PASELTD---EALDEIYG 245 (258)
T ss_pred ChhhhhH---HHHHHHhc
Confidence 9999643 34444443
No 151
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=4.5e-40 Score=359.04 Aligned_cols=204 Identities=28% Similarity=0.443 Sum_probs=177.0
Q ss_pred EEEEEEEEEEcCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHH---h-
Q 000432 1262 ISFHNLQIRYAEHL--PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHD---L- 1335 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~---L- 1335 (1513)
++++||+..|..+. ..+|+|+||+|++||.|+|+||||||||||+++|-++-.|++|+|.++|.|+..++-++ +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 67999999996543 36999999999999999999999999999999999999999999999999999998544 3
Q ss_pred hhceEEEcCCCccccC-cHhhccC-C--CCCC----CHHHHHHHHHHcCCcHHHH-hhhccccchhccCCCCCChhHHHH
Q 000432 1336 RSRLGIIPQDPTLFDG-TVRGNLD-P--LVQY----SDKQVWEALDKCQLGDLVR-AKEEKLDSTVAENGENWSVGQRQL 1406 (1513)
Q Consensus 1336 R~~isiVpQdp~LF~g-TIR~NLd-p--~~~~----sdeei~~aL~~~~l~~~I~-~lp~gLdt~V~e~G~nLSgGQRQr 1406 (1513)
|++||+|+|+..|++. |++||+. | +... .++.+.+.++..++.+... +.| ..||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~p-----------~eLSGGqqQR 150 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKKP-----------SELSGGQQQR 150 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCCc-----------hhcCHHHHHH
Confidence 5679999999998865 9999996 2 2222 2455667777778876554 333 4689999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCEEeE
Q 000432 1407 FCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVIDSDLVLVLSDGRIAE 1476 (1513)
Q Consensus 1407 l~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE 1476 (1513)
+||||||+.+|+|++.||||+|||.+|.+.|.+.+++.- .++|+|+|||+......|||++.|.+|++.+
T Consensus 151 VAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 151 VAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 999999999999999999999999999999999999874 3789999999999999999999999999543
No 152
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=1.4e-39 Score=376.31 Aligned_cols=219 Identities=25% Similarity=0.373 Sum_probs=195.8
Q ss_pred CceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhc
Q 000432 1259 VGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSR 1338 (1513)
Q Consensus 1259 ~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~ 1338 (1513)
.+.|+++|++++ + .++|+|+||+|++||++||+|++|||||||+++|+|+++|++|+|.+|| +
T Consensus 37 ~~~l~i~nls~~---~-~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g-------------~ 99 (282)
T cd03291 37 DNNLFFSNLCLV---G-APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG-------------R 99 (282)
T ss_pred CCeEEEEEEEEe---c-ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------E
Confidence 457999999995 2 3599999999999999999999999999999999999999999999998 3
Q ss_pred eEEEcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCC
Q 000432 1339 LGIIPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSS 1418 (1513)
Q Consensus 1339 isiVpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ 1418 (1513)
++|+||++.+|++|+++|+.+.....+.++.++++.+++.+.+..+|.++++.+++.+.+||+|||||++|||||+++|+
T Consensus 100 i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~p~ 179 (282)
T cd03291 100 ISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKDAD 179 (282)
T ss_pred EEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999998643445556778888899999999999999999999999999999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHH-HHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhcCChHHHHHH
Q 000432 1419 ILVLDEATASVDSATDGVIQKI-ISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLEREDSFFSQLI 1495 (1513)
Q Consensus 1419 ILiLDEaTSslD~~Te~~Iq~~-i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l~ 1495 (1513)
||||||||++||+++...+.+. +++..+++|+|+|+|+++.+..||+|++|++|++++.|+++++.+. ...|.+.+
T Consensus 180 iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-~~~~~~~~ 256 (282)
T cd03291 180 LYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL-RPDFSSKL 256 (282)
T ss_pred EEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc-chHHHHHH
Confidence 9999999999999999888765 4555568999999999999989999999999999999999999865 34444333
No 153
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-40 Score=374.17 Aligned_cols=212 Identities=26% Similarity=0.409 Sum_probs=183.7
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++||+++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+. .|++++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 2 SIEVRNVSKRFGD--FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEEeEEEEECC--EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 3789999999964 359999999999999999999999999999999999999999999999999876653 367899
Q ss_pred EEcCCCcccc-CcHhhccCCCC---CC----C----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHH
Q 000432 1341 IIPQDPTLFD-GTVRGNLDPLV---QY----S----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFC 1408 (1513)
Q Consensus 1341 iVpQdp~LF~-gTIR~NLdp~~---~~----s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~ 1408 (1513)
|+||+|.+|. .|+++|+.... .. + ++++.++++..++.+...+. ..+||||||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRY-----------PAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcC-----------hhhCCHHHHHHHH
Confidence 9999999986 59999997421 11 1 23466778888776544332 3579999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHh
Q 000432 1409 LGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1409 LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
|||||+++|+||+|||||++||+++.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999987643 7899999999998765 99999999999999999999986
Q ss_pred cC
Q 000432 1486 RE 1487 (1513)
Q Consensus 1486 ~~ 1487 (1513)
++
T Consensus 227 ~~ 228 (239)
T cd03296 227 HP 228 (239)
T ss_pred CC
Confidence 54
No 154
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.3e-38 Score=349.88 Aligned_cols=469 Identities=20% Similarity=0.259 Sum_probs=341.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChhHHHHHHhcchHHHhHHHHHHHHHHHHH
Q 000432 986 VYTLLTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTGRILNRASNDQSVLDLELAGRLGWCAFS 1065 (1513)
Q Consensus 986 vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G~ilnR~s~D~~~id~~l~~~l~~~~~~ 1065 (1513)
.|+++.....+...+.......+|.....+++.++.++++.+|+.-+++...++++.++++|+..+. +-...+..++++
T Consensus 53 ~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~IS-f~~s~lp~~~qa 131 (546)
T COG4615 53 EFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNIS-FAFSRLPELVQA 131 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhccccccee-ehHhhhHHHHHH
Confidence 3444444445555666777888999999999999999999999999999999999999999999998 444556678888
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHchHHHHHHhchHHHHHHH
Q 000432 1066 IIQILGTIGVMSQVAWQVFVIFIPVTGICIWYQQYYIPTARELARLAEIQRAPILHHFAESLAGAATIHAFDQEDRFTNA 1145 (1513)
Q Consensus 1066 ~~~~~~~l~v~~~~~~~l~lv~ip~~~l~~~~~~~y~~~~r~l~rl~~~~~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~ 1145 (1513)
.+..+++.+.+++.+|+++++.+..+++.++.+...++..-+-.+...+....+.++++..+.|.+..+....-.+....
T Consensus 132 ~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~ 211 (546)
T COG4615 132 IILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHN 211 (546)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHh
Confidence 89999999999999999988777666665555444433333334444455667889999999999999887654432222
Q ss_pred H------HHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1146 N------LSLIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLVVLVTLPEGIINPSIAGLAVTYGINLNVLQASIIWN 1219 (1513)
Q Consensus 1146 ~------~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~~~~~~~g~i~~g~~g~~l~y~~~l~~~l~~~~~~ 1219 (1513)
+ ++.-+...+.......+..|....+-.+..+++ ++... .+--+...+...+...+-+-.++..++..
T Consensus 212 ~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf----~lal~--~~w~st~~a~tivlvlLflr~pL~s~vgi 285 (546)
T COG4615 212 NLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVF----WLALS--LGWASTNVAATIVLVLLFLRTPLLSAVGI 285 (546)
T ss_pred hhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHH----HHHHh--hccchhhHHHHHHHHHHHHhhHHHHHHhh
Confidence 1 112222222222222344454433222211111 11111 11111111111222234456778888888
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCCCcccCCCCCCCCCCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCC
Q 000432 1220 ICNAENKMISVERILQYSNLPSEAPLVTEECRPPSNWPDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTG 1299 (1513)
Q Consensus 1220 ~~~le~~~~sveRi~e~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTG 1299 (1513)
+-.+-.+.++.+||.++...|..+.. ....+-++| ..||++||.|.|.+.. .-+..||++|+.||.|-|+|.+|
T Consensus 286 lP~l~~AqvA~~kiakle~~~~~a~~--~~~q~~p~~---~~lelrnvrfay~~~~-FhvgPiNl~ikrGelvFliG~NG 359 (546)
T COG4615 286 LPTLLTAQVAFNKIAKLELAPYKADF--PRPQAFPDW---KTLELRNVRFAYQDNA-FHVGPINLTIKRGELVFLIGGNG 359 (546)
T ss_pred hhHHHHHHHHHHHHHHhhcCCccccC--CCCCcCCcc---cceeeeeeeeccCccc-ceecceeeEEecCcEEEEECCCC
Confidence 88888999999999998763332211 112222335 4699999999998764 35788999999999999999999
Q ss_pred CCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcH
Q 000432 1300 SGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGD 1379 (1513)
Q Consensus 1300 SGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~ 1379 (1513)
|||||++++|.|+|.|++|+|++||.+++.-++++.|+-++-|.-|-+||+.++ -|.+.++.+.+..-|++..+..
T Consensus 360 sGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll----~~e~~as~q~i~~~LqrLel~~ 435 (546)
T COG4615 360 SGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL----GPEGKASPQLIEKWLQRLELAH 435 (546)
T ss_pred CcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh----CCccCCChHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999998765 2333477777777777665544
Q ss_pred HHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccCh
Q 000432 1380 LVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRI 1457 (1513)
Q Consensus 1380 ~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl 1457 (1513)
...-. +|==+ -..||-|||.|+++--|++-+.+|+++||=-|--||.=.+...+.+--.. .|+||+.|+|+-
T Consensus 436 ktsl~-d~~fs-----~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd 509 (546)
T COG4615 436 KTSLN-DGRFS-----NLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDD 509 (546)
T ss_pred hhccc-CCccc-----ccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCc
Confidence 32211 11111 13589999999999999999999999999999999999988877654332 599999999999
Q ss_pred hhHhhcCEEEEEeCCEEeEe
Q 000432 1458 HTVIDSDLVLVLSDGRIAEY 1477 (1513)
Q Consensus 1458 ~ti~~~DrIlVLd~G~IvE~ 1477 (1513)
+-...+||++-|++|+++|.
T Consensus 510 ~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 510 HYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred hhhhhHHHHHHHhcCceeec
Confidence 99999999999999999986
No 155
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-40 Score=376.50 Aligned_cols=211 Identities=29% Similarity=0.457 Sum_probs=184.0
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC---hHHhhhc
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIG---LHDLRSR 1338 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~---l~~LR~~ 1338 (1513)
|+++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (241)
T cd03256 1 IEVENLSKTYPNG-KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQ 79 (241)
T ss_pred CEEeeEEEecCCc-cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhc
Confidence 5789999999752 35999999999999999999999999999999999999999999999999998876 5668899
Q ss_pred eEEEcCCCcccc-CcHhhccCCCC---------------CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChh
Q 000432 1339 LGIIPQDPTLFD-GTVRGNLDPLV---------------QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVG 1402 (1513)
Q Consensus 1339 isiVpQdp~LF~-gTIR~NLdp~~---------------~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgG 1402 (1513)
++++||++.+|. .|+++|+.... ...++++.++++..++.+.. ...+.+||||
T Consensus 80 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G 148 (241)
T cd03256 80 IGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKA-----------YQRADQLSGG 148 (241)
T ss_pred cEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhh-----------CCCcccCCHH
Confidence 999999999887 69999995310 11234566777777765432 2345689999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecC
Q 000432 1403 QRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDS 1479 (1513)
Q Consensus 1403 QRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gt 1479 (1513)
||||++||||++++|+||||||||++||+.+...+.+.|++.. .++|+|+|+|+++.+.+ ||+|++|++|++++.|+
T Consensus 149 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 228 (241)
T cd03256 149 QQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGP 228 (241)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecC
Confidence 9999999999999999999999999999999999999999865 37999999999999984 99999999999999999
Q ss_pred hhHHH
Q 000432 1480 PTKLL 1484 (1513)
Q Consensus 1480 p~eLl 1484 (1513)
++++.
T Consensus 229 ~~~~~ 233 (241)
T cd03256 229 PAELT 233 (241)
T ss_pred HHHhh
Confidence 99874
No 156
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2.2e-40 Score=371.24 Aligned_cols=202 Identities=28% Similarity=0.401 Sum_probs=177.3
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChH---Hhhhc
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLH---DLRSR 1338 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~---~LR~~ 1338 (1513)
|+++|++++|+++..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+.. .+|++
T Consensus 2 l~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 81 (216)
T TIGR00960 2 IRFEQVSKAYPGGHQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRH 81 (216)
T ss_pred eEEEEEEEEecCCCeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHh
Confidence 789999999965434599999999999999999999999999999999999999999999999999876544 47889
Q ss_pred eEEEcCCCcccc-CcHhhccCCC----C---CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHH
Q 000432 1339 LGIIPQDPTLFD-GTVRGNLDPL----V---QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLG 1410 (1513)
Q Consensus 1339 isiVpQdp~LF~-gTIR~NLdp~----~---~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LA 1410 (1513)
++|+||+|.+|. .|+++|+... + +..++++.++++.+++.+...+.| .+||||||||++||
T Consensus 82 i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~la 150 (216)
T TIGR00960 82 IGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----------MQLSGGEQQRVAIA 150 (216)
T ss_pred ceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHHH
Confidence 999999999986 5999999632 1 113456888999999876654443 47999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEE
Q 000432 1411 RTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRI 1474 (1513)
Q Consensus 1411 RALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~I 1474 (1513)
|||+++|+||+|||||++||+++.+.+.+.|++.. +++|+|+|+|+++.+.. ||+|++|++|+|
T Consensus 151 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 151 RAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999998764 47899999999999976 899999999985
No 157
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.4e-40 Score=393.13 Aligned_cols=205 Identities=25% Similarity=0.395 Sum_probs=182.3
Q ss_pred CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHh----hhceEEEcCCCcccc-
Q 000432 1276 PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDL----RSRLGIIPQDPTLFD- 1350 (1513)
Q Consensus 1276 ~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~L----R~~isiVpQdp~LF~- 1350 (1513)
..+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.|||.|+...+..++ |++++||||++.+|.
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 358999999999999999999999999999999999999999999999999999998888 789999999999997
Q ss_pred CcHhhccCCC---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000432 1351 GTVRGNLDPL---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLD 1423 (1513)
Q Consensus 1351 gTIR~NLdp~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLD 1423 (1513)
.||++|+.+. ...+ ++++.++|+.++|.++..+.| .+||||||||++|||||+++|+||+||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----------~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYP-----------DELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCCh-----------hhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 5999999642 1122 356788899998877665544 479999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCChHH
Q 000432 1424 EATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLEREDSFF 1491 (1513)
Q Consensus 1424 EaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f 1491 (1513)
||||+||+.+.+.+++.+++.. .++|+|+|||+++.+.. ||||++|++|++++.|+|+++++++...|
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~ 225 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEY 225 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHH
Confidence 9999999999999999998764 37999999999998655 99999999999999999999998754333
No 158
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-40 Score=373.91 Aligned_cols=214 Identities=29% Similarity=0.443 Sum_probs=186.7
Q ss_pred EEEEEEEEEEcCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHH---hh
Q 000432 1262 ISFHNLQIRYAEHL--PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHD---LR 1336 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~---LR 1336 (1513)
|+++|++++|++.. .++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+..+ .|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999997531 25999999999999999999999999999999999999999999999999998876543 47
Q ss_pred hceEEEcCCCcccc-CcHhhccCCC---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHH
Q 000432 1337 SRLGIIPQDPTLFD-GTVRGNLDPL---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFC 1408 (1513)
Q Consensus 1337 ~~isiVpQdp~LF~-gTIR~NLdp~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~ 1408 (1513)
++++++||+|.+|. .|+++|+... ...+ ++++.++++..++.+...+. ..+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAY-----------PAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcC-----------hhhCCHHHHHHHH
Confidence 89999999999997 5999999631 1122 34677888888876654433 3579999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHh
Q 000432 1409 LGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1409 LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
||||++++|++|||||||++||+.+...+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999988653 7899999999999876 99999999999999999999876
Q ss_pred c
Q 000432 1486 R 1486 (1513)
Q Consensus 1486 ~ 1486 (1513)
+
T Consensus 231 ~ 231 (233)
T cd03258 231 N 231 (233)
T ss_pred C
Confidence 4
No 159
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-40 Score=375.56 Aligned_cols=216 Identities=26% Similarity=0.420 Sum_probs=187.5
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
++++||+++|++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 l~~~~l~~~~~~~-~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (242)
T cd03295 1 IEFENVTKRYGGG-KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGY 79 (242)
T ss_pred CEEEEEEEEeCCc-ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEE
Confidence 4789999999753 359999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EcCCCcccc-CcHhhccCCCC---CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1342 IPQDPTLFD-GTVRGNLDPLV---QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1342 VpQdp~LF~-gTIR~NLdp~~---~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+||+|.+|. .|+++|+.... ..+ ++++.++++..++.+. ......+.+||||||||++||||+
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~---------~~~~~~~~~LS~G~~qrv~laral 150 (242)
T cd03295 80 VIQQIGLFPHMTVEENIALVPKLLKWPKEKIRERADELLALVGLDPA---------EFADRYPHELSGGQQQRVGVARAL 150 (242)
T ss_pred EccCccccCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcH---------HHHhcChhhCCHHHHHHHHHHHHH
Confidence 999999996 69999996421 112 3456777887777530 012234568999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcC
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLERE 1487 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~ 1487 (1513)
+++|++|+|||||++||+++...+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++.+++
T Consensus 151 ~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 227 (242)
T cd03295 151 AADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRSP 227 (242)
T ss_pred hcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcCC
Confidence 999999999999999999999999999988653 7999999999998765 9999999999999999999987654
No 160
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-40 Score=377.69 Aligned_cols=222 Identities=23% Similarity=0.416 Sum_probs=192.8
Q ss_pred CCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCC--C
Q 000432 1258 DVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-----TMGSIIIDNVDITK--I 1330 (1513)
Q Consensus 1258 ~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-----~~G~I~IDGvdI~~--i 1330 (1513)
+.+.|+++||+++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 16 ~~~~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 16 TEIKMRARDVSVFYGE--KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CCceEEEEeEEEEECC--EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 3468999999999964 3599999999999999999999999999999999999975 89999999999975 3
Q ss_pred ChHHhhhceEEEcCCCccccCcHhhccCCCC---CC--C----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCCh
Q 000432 1331 GLHDLRSRLGIIPQDPTLFDGTVRGNLDPLV---QY--S----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSV 1401 (1513)
Q Consensus 1331 ~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~---~~--s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSg 1401 (1513)
+...+|++++++||+|.+|.+|+++|+.... .. + ++++.++++.+++.+.+.. .....+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKD-------RLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhH-------HhhCCcccCCH
Confidence 5667899999999999999999999996321 11 1 3457888998888765432 22345678999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecCh
Q 000432 1402 GQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSP 1480 (1513)
Q Consensus 1402 GQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp 1480 (1513)
|||||++|||||+.+|++|||||||++||+.+...+.+.|++..+++|+|+++|+++.+.. ||+|++|++|++++.|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999987667899999999999966 899999999999999999
Q ss_pred hHHHhcCC
Q 000432 1481 TKLLERED 1488 (1513)
Q Consensus 1481 ~eLl~~~~ 1488 (1513)
+++..++.
T Consensus 247 ~~~~~~~~ 254 (267)
T PRK14235 247 EKMFTNPD 254 (267)
T ss_pred HHHHhCCC
Confidence 99986543
No 161
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-40 Score=383.67 Aligned_cols=216 Identities=27% Similarity=0.447 Sum_probs=184.7
Q ss_pred eEEEEEEEEEEcCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCC----ChH
Q 000432 1261 TISFHNLQIRYAEHL---PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKI----GLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i----~l~ 1333 (1513)
.|+++||+++|+++. .++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 389999999996432 3599999999999999999999999999999999999999999999999999754 346
Q ss_pred HhhhceEEEcCCC--ccccCcHhhccCCCC---CCCH----HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHH
Q 000432 1334 DLRSRLGIIPQDP--TLFDGTVRGNLDPLV---QYSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQR 1404 (1513)
Q Consensus 1334 ~LR~~isiVpQdp--~LF~gTIR~NLdp~~---~~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQR 1404 (1513)
.+|++|+||||+| .+|..|+++|+.+.. ..+. +++.++++.+++.. ........+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~----------~~~~~~~~~LSgGq~ 151 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSR----------DVMSQSPFQMSGGQM 151 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCCcccCCHHHH
Confidence 7899999999998 688899999996421 2333 33445555555531 112345678999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChh
Q 000432 1405 QLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPT 1481 (1513)
Q Consensus 1405 Qrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~ 1481 (1513)
||++|||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|+|+++.+.. ||||++|++|++++.|+++
T Consensus 152 qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~ 231 (286)
T PRK13646 152 RKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPK 231 (286)
T ss_pred HHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 99999999999999999999999999999999999998864 47999999999999864 8999999999999999999
Q ss_pred HHHhc
Q 000432 1482 KLLER 1486 (1513)
Q Consensus 1482 eLl~~ 1486 (1513)
++.++
T Consensus 232 ~~~~~ 236 (286)
T PRK13646 232 ELFKD 236 (286)
T ss_pred HHHhC
Confidence 98875
No 162
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=4.2e-40 Score=392.00 Aligned_cols=216 Identities=26% Similarity=0.370 Sum_probs=191.5
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+.+|++|+|.+||.++.+.+.+ |++++
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig 79 (353)
T TIGR03265 4 YLSIDNIRKRFGA--FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYG 79 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEE
Confidence 5899999999964 3589999999999999999999999999999999999999999999999999887764 67899
Q ss_pred EEcCCCcccc-CcHhhccCCC-C--CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHH
Q 000432 1341 IIPQDPTLFD-GTVRGNLDPL-V--QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRT 1412 (1513)
Q Consensus 1341 iVpQdp~LF~-gTIR~NLdp~-~--~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARA 1412 (1513)
||||++.+|. .|+++|+.+. . ..+ ++++.++++..++.++..+.| .+||||||||++||||
T Consensus 80 ~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRvaLARa 148 (353)
T TIGR03265 80 IVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYP-----------GQLSGGQQQRVALARA 148 (353)
T ss_pred EEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCCh-----------hhCCHHHHHHHHHHHH
Confidence 9999999996 6999999742 1 122 356778888888877655443 5799999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCCh
Q 000432 1413 LLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLEREDS 1489 (1513)
Q Consensus 1413 LLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~~ 1489 (1513)
|+++|++|+||||||+||..+...+.+.|++..+ +.|+|+|||+.+.+.. ||||+||++|++++.|+|+++.+++..
T Consensus 149 L~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p~~ 228 (353)
T TIGR03265 149 LATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHPAT 228 (353)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCC
Confidence 9999999999999999999999999999987654 7899999999999866 999999999999999999999988765
Q ss_pred HH
Q 000432 1490 FF 1491 (1513)
Q Consensus 1490 ~f 1491 (1513)
.|
T Consensus 229 ~~ 230 (353)
T TIGR03265 229 PF 230 (353)
T ss_pred HH
Confidence 55
No 163
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-40 Score=376.58 Aligned_cols=218 Identities=29% Similarity=0.401 Sum_probs=189.3
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCC--CCChH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-----TMGSIIIDNVDIT--KIGLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-----~~G~I~IDGvdI~--~i~l~ 1333 (1513)
.|+++||+++|+. .++|+|+||+|++||.+||+|+||||||||+++|.|+++| ++|+|.+||.++. +.+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (253)
T PRK14267 4 AIETVNLRVYYGS--NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPI 81 (253)
T ss_pred eEEEEeEEEEeCC--eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChH
Confidence 5899999999964 3599999999999999999999999999999999999987 4999999999997 45666
Q ss_pred HhhhceEEEcCCCccccC-cHhhccCCC---CC--CC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhH
Q 000432 1334 DLRSRLGIIPQDPTLFDG-TVRGNLDPL---VQ--YS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQ 1403 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~g-TIR~NLdp~---~~--~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQ 1403 (1513)
.+|++++++||+|.+|.+ |+++|+... .. .+ ++++.++++..++.+.+.. .......+|||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~ 154 (253)
T PRK14267 82 EVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKD-------RLNDYPSNLSGGQ 154 (253)
T ss_pred HHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhh-------hhccChhhCCHHH
Confidence 789999999999999976 999999631 11 11 2456778888887654322 2234456899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhH
Q 000432 1404 RQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTK 1482 (1513)
Q Consensus 1404 RQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~e 1482 (1513)
|||++||||++++|++|||||||++||+++...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|++++
T Consensus 155 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 234 (253)
T PRK14267 155 RQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRK 234 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987677999999999999876 99999999999999999999
Q ss_pred HHhcC
Q 000432 1483 LLERE 1487 (1513)
Q Consensus 1483 Ll~~~ 1487 (1513)
+.+++
T Consensus 235 ~~~~~ 239 (253)
T PRK14267 235 VFENP 239 (253)
T ss_pred HHhCC
Confidence 98764
No 164
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-39 Score=376.91 Aligned_cols=222 Identities=25% Similarity=0.471 Sum_probs=191.6
Q ss_pred CCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--
Q 000432 1257 PDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE-----PTMGSIIIDNVDITK-- 1329 (1513)
Q Consensus 1257 p~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e-----p~~G~I~IDGvdI~~-- 1329 (1513)
|....|+++||+++|++ ..+|+|+||+|++||++||+|++|||||||+++|.|+++ |++|+|.+||.++..
T Consensus 9 ~~~~~l~i~nl~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~ 86 (269)
T PRK14259 9 SKNIIISLQNVTISYGT--FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPR 86 (269)
T ss_pred CCCceEEEEeEEEEECC--EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccc
Confidence 33457999999999975 359999999999999999999999999999999999988 689999999999863
Q ss_pred CChHHhhhceEEEcCCCccccCcHhhccCCCC---CC---CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhH
Q 000432 1330 IGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLV---QY---SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQ 1403 (1513)
Q Consensus 1330 i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~---~~---sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQ 1403 (1513)
.+..++|++++|+||+|.+|..|+++|+.... .. .++++.++++.+++.+.+. ........+||+||
T Consensus 87 ~~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 159 (269)
T PRK14259 87 VDPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECK-------DKLNESGYSLSGGQ 159 (269)
T ss_pred CCHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhh-------hhhCCCcccCCHHH
Confidence 56678899999999999999999999997532 11 2355677888887754332 22344456899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeC-----------
Q 000432 1404 RQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSD----------- 1471 (1513)
Q Consensus 1404 RQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~----------- 1471 (1513)
|||++|||||+++|+||+|||||++||+.+...+.+.|++..+++|+|+++|+++.+.+ ||+|++|++
T Consensus 160 ~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~ 239 (269)
T PRK14259 160 QQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKV 239 (269)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEecccccccccccc
Confidence 99999999999999999999999999999999999999988677899999999999866 999999996
Q ss_pred CEEeEecChhHHHhcC
Q 000432 1472 GRIAEYDSPTKLLERE 1487 (1513)
Q Consensus 1472 G~IvE~Gtp~eLl~~~ 1487 (1513)
|+++|.|+++++.+++
T Consensus 240 g~~~~~~~~~~~~~~~ 255 (269)
T PRK14259 240 GYLVEFNETKKIFNSP 255 (269)
T ss_pred ceEEEeCCHHHHHhCc
Confidence 6799999999998754
No 165
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.6e-40 Score=382.85 Aligned_cols=214 Identities=25% Similarity=0.405 Sum_probs=185.7
Q ss_pred EEEEEEEEEEcCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCC----CChHH
Q 000432 1262 ISFHNLQIRYAEHL---PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITK----IGLHD 1334 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~----i~l~~ 1334 (1513)
|+++||+++|+++. +++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.. .....
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 78999999997543 259999999999999999999999999999999999999999999999999863 34667
Q ss_pred hhhceEEEcCCC--ccccCcHhhccCCCC---CCCH----HHHHHHHHHcCCc-HHHHhhhccccchhccCCCCCChhHH
Q 000432 1335 LRSRLGIIPQDP--TLFDGTVRGNLDPLV---QYSD----KQVWEALDKCQLG-DLVRAKEEKLDSTVAENGENWSVGQR 1404 (1513)
Q Consensus 1335 LR~~isiVpQdp--~LF~gTIR~NLdp~~---~~sd----eei~~aL~~~~l~-~~I~~lp~gLdt~V~e~G~nLSgGQR 1404 (1513)
+|++++||+|+| .+|..|+.+|+.+.. ..+. +++.++++.+++. ++.. ....+||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~~LSgGqk 150 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWE-----------KSPFELSGGQM 150 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhcc-----------CCcccCCHHHH
Confidence 899999999998 799999999996431 1222 3466778888874 2322 33468999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhH
Q 000432 1405 QLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTK 1482 (1513)
Q Consensus 1405 Qrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~e 1482 (1513)
||++|||||+.+|+||||||||++||+.+...+.+.|++.. .++|||+|||+++.+.. ||||++|++|++++.|+|++
T Consensus 151 qrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 151 RRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999999999999998764 47899999999998854 99999999999999999999
Q ss_pred HHhc
Q 000432 1483 LLER 1486 (1513)
Q Consensus 1483 Ll~~ 1486 (1513)
+.++
T Consensus 231 ~~~~ 234 (288)
T PRK13643 231 VFQE 234 (288)
T ss_pred HHcC
Confidence 8764
No 166
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=2.9e-37 Score=375.28 Aligned_cols=467 Identities=20% Similarity=0.184 Sum_probs=333.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCcccccccChh------HHHHHHhcchHHHhHH
Q 000432 981 NIVLLVYTLLTVGSSLCVLLRAMLVAITGLRTAQKLFTNMLHSVHRAPMAFFDSTPTG------RILNRASNDQSVLDLE 1054 (1513)
Q Consensus 981 ~~~~~vy~~l~~~~~~~~~~~~~~~~~~~~~~s~~l~~~l~~~ll~~p~~fFd~~~~G------~ilnR~s~D~~~id~~ 1054 (1513)
...+.+|.+++.+...+...+.++...+..+.-..|-+.++++-+.-. .||.....| ..=.|+..|+...-..
T Consensus 86 ~~~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~-~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~ 164 (604)
T COG4178 86 WQQLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPR-RYYRLAQAGGIGLIDNPDQRIQEDIRNFTET 164 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHhcccccCCCChHHhHHHHHHHHHhh
Confidence 455678888888888888889999888888888888888888888776 555444343 2336888888776655
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhH---------------HHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 1055 LAGRLGWCAFSIIQILGTIGVMSQVAW---------------QVFVIFIPVT----GICIWYQQYYIPTARELARLAEIQ 1115 (1513)
Q Consensus 1055 l~~~l~~~~~~~~~~~~~l~v~~~~~~---------------~l~lv~ip~~----~l~~~~~~~y~~~~r~l~rl~~~~ 1115 (1513)
-......++.++++++...+++...+- .+..+++... ++..++.+...+-.-+..+.+..-
T Consensus 165 t~~l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~f 244 (604)
T COG4178 165 TLDLSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADF 244 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHH
Confidence 555555666666666655555442211 1111111111 222344455555555555666555
Q ss_pred hchHHHHHHHHHchHHHHHHhchHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhcCCcc
Q 000432 1116 RAPILHHFAESLAGAATIHAFDQEDRFTNANLSLIDNHSRPWFHNVSAMEWLCFRLNLLSNFVFAFSLVV-LVTLPEGII 1194 (1513)
Q Consensus 1116 ~s~~~~~~~Etl~Gi~tIRaf~~e~~f~~~~~~~~d~~~~~~~~~~~~~~wl~~~l~~~~~~~~~~~~~~-~~~~~~g~i 1194 (1513)
|..+ .-.-+....|-.|+.|+.-.++..+..+.-.+.+......+.++...-...+-+.+.+-.+. +-.+..|.+
T Consensus 245 R~~L----vrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i 320 (604)
T COG4178 245 RYSL----VRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQI 320 (604)
T ss_pred HHHH----HHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcC
Confidence 5443 33445667788888887665555555554444444444444444333333222222111111 112347889
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CCCCCCCcccCCCCCCCCCCCceEEEEEEE
Q 000432 1195 NPSIAGLAVTYGINLNVLQASIIWNICNAENKMISVERILQYSN------LPSEAPLVTEECRPPSNWPDVGTISFHNLQ 1268 (1513)
Q Consensus 1195 ~~g~~g~~l~y~~~l~~~l~~~~~~~~~le~~~~sveRi~e~~~------~~~e~~~~~~~~~~~~~wp~~g~I~f~nvs 1268 (1513)
+-|.+..+.+...++...+.|++..+..+..-...+.|+.++.+ .+++.+.... .+-...-.....|+|+|++
T Consensus 321 ~~G~lmqa~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~nl~ 399 (604)
T COG4178 321 TFGGLMQAVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTG-RRIDFDDNADHGITLENLS 399 (604)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCccc-ccccccccccceeEEeeee
Confidence 99999999999999999999999999999999999999998863 2222211100 0000000014689999999
Q ss_pred EEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCcc
Q 000432 1269 IRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPTL 1348 (1513)
Q Consensus 1269 f~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~L 1348 (1513)
..-+++. ..|++.||+|+|||.+-|.|+||||||||+++|.|+.+--+|+|.+-. -+++-++||.|++
T Consensus 400 l~~p~~~-~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~-----------~~~~lflpQ~PY~ 467 (604)
T COG4178 400 LRTPDGQ-TLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPA-----------DSALLFLPQRPYL 467 (604)
T ss_pred EECCCCC-eeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCC-----------CCceEEecCCCCC
Confidence 9987665 689999999999999999999999999999999999999999987641 1457899999999
Q ss_pred ccCcHhhccC-CCC--CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecC
Q 000432 1349 FDGTVRGNLD-PLV--QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEA 1425 (1513)
Q Consensus 1349 F~gTIR~NLd-p~~--~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEa 1425 (1513)
-.||+||=|. |.. +++|+|+.++|.+|+|.++++++.+--+ -..-||+||||||++||.+|++||+++||||
T Consensus 468 p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~~~-----W~~vLS~GEqQRlafARilL~kP~~v~LDEA 542 (604)
T COG4178 468 PQGTLREALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEEDR-----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEA 542 (604)
T ss_pred CCccHHHHHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhccCc-----HhhhcChhHHHHHHHHHHHHcCCCEEEEecc
Confidence 9999999996 443 3899999999999999999998754322 3456999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEe
Q 000432 1426 TASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLS 1470 (1513)
Q Consensus 1426 TSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd 1470 (1513)
||+||.++|..+.+.++++.+++|+|.|+||-....-.++.+-++
T Consensus 543 TsALDe~~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 543 TSALDEETEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred hhccChHHHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 999999999999999999999999999999977766677766554
No 167
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=373.98 Aligned_cols=222 Identities=28% Similarity=0.445 Sum_probs=192.4
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCCCChHHh
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-----TMGSIIIDNVDITKIGLHDL 1335 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-----~~G~I~IDGvdI~~i~l~~L 1335 (1513)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...+
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 80 (250)
T PRK14247 3 KIEIRDLKVSFGQ--VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIEL 80 (250)
T ss_pred eEEEEeeEEEECC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHH
Confidence 4899999999965 3599999999999999999999999999999999999974 69999999999998888889
Q ss_pred hhceEEEcCCCccc-cCcHhhccCCCC---C------CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1336 RSRLGIIPQDPTLF-DGTVRGNLDPLV---Q------YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1336 R~~isiVpQdp~LF-~gTIR~NLdp~~---~------~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
|++++|+||+|.+| +.|+++|+.... . ..++++.++++.+++.+.+. +.+|.. ..+|||||||
T Consensus 81 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~~~----~~~LSgG~~q 153 (250)
T PRK14247 81 RRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK---DRLDAP----AGKLSGGQQQ 153 (250)
T ss_pred hccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh---hhhcCC----cccCCHHHHH
Confidence 99999999999755 679999996321 1 11356788999998865432 223433 4579999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
|++||||++++|+||+|||||++||+.+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 154 RLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHH
Confidence 999999999999999999999999999999999999987678999999999999865 9999999999999999999998
Q ss_pred hcCChHH
Q 000432 1485 EREDSFF 1491 (1513)
Q Consensus 1485 ~~~~~~f 1491 (1513)
+++...+
T Consensus 234 ~~~~~~~ 240 (250)
T PRK14247 234 TNPRHEL 240 (250)
T ss_pred cCCccHH
Confidence 7654333
No 168
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.2e-40 Score=381.21 Aligned_cols=214 Identities=28% Similarity=0.456 Sum_probs=187.5
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCC--CCChHHhhhc
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDIT--KIGLHDLRSR 1338 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~--~i~l~~LR~~ 1338 (1513)
.|+++||+++|+++ .++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.|+. ..+..++|++
T Consensus 5 ~l~~~~l~~~~~~~-~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ 83 (283)
T PRK13636 5 ILKVEELNYNYSDG-THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRES 83 (283)
T ss_pred eEEEEeEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhh
Confidence 59999999999633 35999999999999999999999999999999999999999999999999984 3456778999
Q ss_pred eEEEcCCC--ccccCcHhhccCCC---CCCCH----HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHH
Q 000432 1339 LGIIPQDP--TLFDGTVRGNLDPL---VQYSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCL 1409 (1513)
Q Consensus 1339 isiVpQdp--~LF~gTIR~NLdp~---~~~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~L 1409 (1513)
++|+||+| .+|+.|+++|+... ...+. +++.++++.+++.++. .....+||||||||++|
T Consensus 84 ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LS~G~~qrl~l 152 (283)
T PRK13636 84 VGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLK-----------DKPTHCLSFGQKKRVAI 152 (283)
T ss_pred EEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhh-----------hCCcccCCHHHHHHHHH
Confidence 99999998 57899999999642 12232 3467778888876543 23456899999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1410 GRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1410 ARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
||||+.+|+||||||||++||+++...+.+.|++..+ ++|||+++|+++.+.. ||||++|++|++++.|+++++++.
T Consensus 153 araL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 153 AGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred HHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999988754 7999999999999974 999999999999999999998874
No 169
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=5.5e-40 Score=374.84 Aligned_cols=211 Identities=29% Similarity=0.425 Sum_probs=183.0
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCh---HHhhhc
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGL---HDLRSR 1338 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l---~~LR~~ 1338 (1513)
|+++||+++|+.+ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++..++. ..+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (243)
T TIGR02315 2 LEVENLSKVYPNG-KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRR 80 (243)
T ss_pred eEEEeeeeecCCC-cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhh
Confidence 6899999999723 459999999999999999999999999999999999999999999999999987654 447889
Q ss_pred eEEEcCCCcccc-CcHhhccCCCC---------------CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChh
Q 000432 1339 LGIIPQDPTLFD-GTVRGNLDPLV---------------QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVG 1402 (1513)
Q Consensus 1339 isiVpQdp~LF~-gTIR~NLdp~~---------------~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgG 1402 (1513)
++++||++.+|. .|+++|+.... ...++++.++++..++.+... ....+||||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG 149 (243)
T TIGR02315 81 IGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAY-----------QRADQLSGG 149 (243)
T ss_pred eEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhc-----------CCcccCCHH
Confidence 999999999886 59999996311 011345677777777754432 345689999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecC
Q 000432 1403 QRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDS 1479 (1513)
Q Consensus 1403 QRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gt 1479 (1513)
||||++|||||+++|+||+|||||++||+++.+.+.+.|++.. .++|+|+|+|+++.+.+ ||+|++|++|++++.|+
T Consensus 150 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~ 229 (243)
T TIGR02315 150 QQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGA 229 (243)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCC
Confidence 9999999999999999999999999999999999999998864 27899999999999865 99999999999999999
Q ss_pred hhHHH
Q 000432 1480 PTKLL 1484 (1513)
Q Consensus 1480 p~eLl 1484 (1513)
++++.
T Consensus 230 ~~~~~ 234 (243)
T TIGR02315 230 PSELD 234 (243)
T ss_pred HHHhC
Confidence 99873
No 170
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-40 Score=367.91 Aligned_cols=202 Identities=26% Similarity=0.400 Sum_probs=176.1
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++++.+ ..|++++|
T Consensus 1 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~--~~~~~i~~ 76 (213)
T cd03259 1 LELKGLSKTYGS--VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP--PERRNIGM 76 (213)
T ss_pred CeeeeeEEEeCC--eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc--hhhccEEE
Confidence 578999999964 35999999999999999999999999999999999999999999999999998654 35778999
Q ss_pred EcCCCcccc-CcHhhccCCCC---CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1342 IPQDPTLFD-GTVRGNLDPLV---QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1342 VpQdp~LF~-gTIR~NLdp~~---~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+||+|.+|. .|+++|+.... ..+ ++++.++++..++.++..+.| .+||||||||++|||||
T Consensus 77 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~al 145 (213)
T cd03259 77 VFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYP-----------HELSGGQQQRVALARAL 145 (213)
T ss_pred EcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHHHHHHHH
Confidence 999999886 59999996321 112 345777888888776544433 47999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEec
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~G 1478 (1513)
+++|++|+|||||++||+++...+.+.|++.. .++|||+++|+++.+.+ ||+|++|++|++++.|
T Consensus 146 ~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 146 AREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999998864 37899999999998866 9999999999999875
No 171
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.1e-38 Score=405.12 Aligned_cols=199 Identities=24% Similarity=0.323 Sum_probs=169.0
Q ss_pred CCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC--CCCcEEEEcCeeCCCCChHHhhhceEEEcCCCc-ccc
Q 000432 1274 HLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE--PTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPT-LFD 1350 (1513)
Q Consensus 1274 ~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e--p~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~-LF~ 1350 (1513)
+....|+|||=-++||.-+|++|.||||||||++.|.+-.+ ..+|+|+|||.+..+ +..++++|||-|++. +=+
T Consensus 802 ~~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~ 878 (1391)
T KOG0065|consen 802 GTRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPE 878 (1391)
T ss_pred cceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCcc
Confidence 44568999999999999999999999999999999998753 357999999998865 789999999999775 556
Q ss_pred CcHhhccCC------CCCCCHHH----HHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCC-CE
Q 000432 1351 GTVRGNLDP------LVQYSDKQ----VWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKS-SI 1419 (1513)
Q Consensus 1351 gTIR~NLdp------~~~~sdee----i~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~-~I 1419 (1513)
-||||-|.+ -.+.+++| +.++.+..+|++. =|..||.-|..||..||.|+.||=-|+.|| .|
T Consensus 879 ~TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~-------~daiVG~~G~GLs~eQRKrLTIgVELvA~P~~i 951 (1391)
T KOG0065|consen 879 LTVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEY-------ADALVGLPGSGLSTEQRKRLTIGVELVANPSSI 951 (1391)
T ss_pred cchHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhh-------hhhhccCCCCCCCHHHhceeeEEEEEecCCcee
Confidence 699999853 12445544 4566666666654 357799999999999999999999999999 89
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhH--hhcCEEEEEe-CCEEeEecChhH
Q 000432 1420 LVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTV--IDSDLVLVLS-DGRIAEYDSPTK 1482 (1513)
Q Consensus 1420 LiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti--~~~DrIlVLd-~G~IvE~Gtp~e 1482 (1513)
|.||||||+||+++...|.+.+|+.. .|+||++.=|..+.. +.+|+++.|+ .|+.|-+|+..+
T Consensus 952 lFLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~ 1018 (1391)
T KOG0065|consen 952 LFLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGE 1018 (1391)
T ss_pred EEecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCccc
Confidence 99999999999999999999999875 699999999998863 5699999997 579999988654
No 172
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=377.63 Aligned_cols=215 Identities=28% Similarity=0.468 Sum_probs=189.1
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++|++++|+++..++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 59999999999744456999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEcCCC--ccccCcHhhccCCC---CCCCHH----HHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHH
Q 000432 1341 IIPQDP--TLFDGTVRGNLDPL---VQYSDK----QVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGR 1411 (1513)
Q Consensus 1341 iVpQdp--~LF~gTIR~NLdp~---~~~sde----ei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LAR 1411 (1513)
|+||+| .++..|+++|+... ...+++ .+.++++..++.++..+. ..+||||||||++|||
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrl~lar 155 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKE-----------PQNLSGGQKQRVAIAS 155 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCC-----------cccCCHHHHHHHHHHH
Confidence 999998 45678999999642 123333 356677777776654433 3689999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhc
Q 000432 1412 TLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1412 ALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
||+++|++|+|||||++||..+.+.+.+.|++..+ ++|+|+++|+++.+..||+|++|++|++++.|+++++.++
T Consensus 156 al~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 156 VLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999988653 4899999999999988999999999999999999998765
No 173
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=7.1e-40 Score=372.26 Aligned_cols=212 Identities=27% Similarity=0.430 Sum_probs=182.8
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHh-hhceE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDL-RSRLG 1340 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~L-R~~is 1340 (1513)
|+++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (236)
T cd03219 1 LEVRGLTKRFGG--LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIG 78 (236)
T ss_pred CeeeeeEEEECC--EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEE
Confidence 578999999964 359999999999999999999999999999999999999999999999999998877664 57799
Q ss_pred EEcCCCccccC-cHhhccCCCC----CC-------------CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChh
Q 000432 1341 IIPQDPTLFDG-TVRGNLDPLV----QY-------------SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVG 1402 (1513)
Q Consensus 1341 iVpQdp~LF~g-TIR~NLdp~~----~~-------------sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgG 1402 (1513)
++||+|.+|.+ |+++|+.... .. .++++.++++..++.+. .......||||
T Consensus 79 ~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG 147 (236)
T cd03219 79 RTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADL-----------ADRPAGELSYG 147 (236)
T ss_pred EEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccch-----------hhCChhhCCHH
Confidence 99999999987 9999996321 10 12234555666655432 33345679999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecCh
Q 000432 1403 QRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSP 1480 (1513)
Q Consensus 1403 QRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp 1480 (1513)
||||++||||++++|++|+|||||++||..+.+.+.+.|++.. +++|+|+++|+++.+.. ||+|++|++|++++.|++
T Consensus 148 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~ 227 (236)
T cd03219 148 QQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTP 227 (236)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCH
Confidence 9999999999999999999999999999999999999998765 67899999999999977 999999999999999999
Q ss_pred hHHHhc
Q 000432 1481 TKLLER 1486 (1513)
Q Consensus 1481 ~eLl~~ 1486 (1513)
+++.++
T Consensus 228 ~~~~~~ 233 (236)
T cd03219 228 DEVRNN 233 (236)
T ss_pred HHhccC
Confidence 998764
No 174
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.1e-39 Score=388.28 Aligned_cols=216 Identities=26% Similarity=0.410 Sum_probs=189.9
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.|+...+. .|++++
T Consensus 2 ~L~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~ 77 (353)
T PRK10851 2 SIEIANIKKSFGR--TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVG 77 (353)
T ss_pred EEEEEEEEEEeCC--eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEE
Confidence 4899999999965 359999999999999999999999999999999999999999999999999987654 467899
Q ss_pred EEcCCCccccC-cHhhccCCCC-------CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHH
Q 000432 1341 IIPQDPTLFDG-TVRGNLDPLV-------QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFC 1408 (1513)
Q Consensus 1341 iVpQdp~LF~g-TIR~NLdp~~-------~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~ 1408 (1513)
||||++.+|.. |+++|+.+.. ..+ ++++.++++..++.++..+.| ..||||||||++
T Consensus 78 ~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LSgGq~QRva 146 (353)
T PRK10851 78 FVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----------AQLSGGQKQRVA 146 (353)
T ss_pred EEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHH
Confidence 99999999975 9999997421 122 346778889898876654443 479999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHh
Q 000432 1409 LGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1409 LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
|||||+++|++|+||||||+||..+...+.+.|++..+ ++|+|+|||+++.+.. ||||++|++|+|++.|+|+++.+
T Consensus 147 lArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 147 LARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999999999999988754 6899999999999776 99999999999999999999998
Q ss_pred cCChHH
Q 000432 1486 REDSFF 1491 (1513)
Q Consensus 1486 ~~~~~f 1491 (1513)
++...|
T Consensus 227 ~p~~~~ 232 (353)
T PRK10851 227 EPATRF 232 (353)
T ss_pred CccchH
Confidence 765443
No 175
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-40 Score=379.54 Aligned_cols=217 Identities=25% Similarity=0.374 Sum_probs=187.4
Q ss_pred EEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHh----hhc
Q 000432 1263 SFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDL----RSR 1338 (1513)
Q Consensus 1263 ~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~L----R~~ 1338 (1513)
.++|++.+|++. ++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+...+ +++
T Consensus 26 ~~~~~~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 26 SKEEILKKTGQT--VGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhhcCCc--eEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 466888888643 58999999999999999999999999999999999999999999999999988776554 468
Q ss_pred eEEEcCCCcccc-CcHhhccCCC---CCC----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHH
Q 000432 1339 LGIIPQDPTLFD-GTVRGNLDPL---VQY----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLG 1410 (1513)
Q Consensus 1339 isiVpQdp~LF~-gTIR~NLdp~---~~~----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LA 1410 (1513)
++++||++.+|. .|+++|+... ... .++++.++++.+++.++..+.| .+||||||||++||
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrv~lA 172 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----------DELSGGMQQRVGLA 172 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----------ccCCHHHHHHHHHH
Confidence 999999999985 6999999631 111 2345778888888877665544 36999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcC
Q 000432 1411 RTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLERE 1487 (1513)
Q Consensus 1411 RALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~ 1487 (1513)
||++++|+||||||||++||+.+.+.+.+.|++.. .++|+|+++|+++.+.. ||+|++|++|++++.|+++++++++
T Consensus 173 ral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~~ 252 (269)
T cd03294 173 RALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTNP 252 (269)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhCc
Confidence 99999999999999999999999999999998764 37999999999999865 9999999999999999999998765
Q ss_pred ChHHH
Q 000432 1488 DSFFS 1492 (1513)
Q Consensus 1488 ~~~f~ 1492 (1513)
...|.
T Consensus 253 ~~~~~ 257 (269)
T cd03294 253 ANDYV 257 (269)
T ss_pred CcHHH
Confidence 54443
No 176
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-39 Score=374.20 Aligned_cols=219 Identities=24% Similarity=0.415 Sum_probs=188.6
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--CChH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE-----PTMGSIIIDNVDITK--IGLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e-----p~~G~I~IDGvdI~~--i~l~ 1333 (1513)
.|+++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~ 81 (251)
T PRK14251 4 IISAKDVHLSYGN--YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLV 81 (251)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHH
Confidence 5899999999964 359999999999999999999999999999999999997 479999999999864 3456
Q ss_pred HhhhceEEEcCCCccccCcHhhccCCCC---CC-----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1334 DLRSRLGIIPQDPTLFDGTVRGNLDPLV---QY-----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~gTIR~NLdp~~---~~-----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
.+|+.++++||++.+|++|+++|+.+.. .. .++++.++++.+++++.. +..+ .....+|||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~---~~~~----~~~~~~LS~Gq~q 154 (251)
T PRK14251 82 ELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET---KDNL----DRNAQAFSGGQQQ 154 (251)
T ss_pred HhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch---HHHh----ccChhhCCHHHHH
Confidence 6788999999999999999999996421 11 234567778888775321 1122 3345689999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
|++||||++++|++|||||||++||+++...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 155 r~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14251 155 RICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987777999999999999876 9999999999999999999998
Q ss_pred hcCC
Q 000432 1485 ERED 1488 (1513)
Q Consensus 1485 ~~~~ 1488 (1513)
..+.
T Consensus 235 ~~~~ 238 (251)
T PRK14251 235 IAPK 238 (251)
T ss_pred hCCC
Confidence 6644
No 177
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-40 Score=375.64 Aligned_cols=221 Identities=25% Similarity=0.428 Sum_probs=190.8
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCCCC--hHH
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE-----PTMGSIIIDNVDITKIG--LHD 1334 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e-----p~~G~I~IDGvdI~~i~--l~~ 1334 (1513)
=+++||+++|++ .++|+|+||+|++||++||+|++|||||||+++|.|++. |++|+|.+||.++.+.+ ...
T Consensus 6 ~~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~ 83 (251)
T PRK14244 6 ASVKNLNLWYGS--KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVL 83 (251)
T ss_pred EEeeeEEEEECC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHH
Confidence 478999999964 369999999999999999999999999999999999986 47999999999987653 346
Q ss_pred hhhceEEEcCCCccccCcHhhccCCC---CC------CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1335 LRSRLGIIPQDPTLFDGTVRGNLDPL---VQ------YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1335 LR~~isiVpQdp~LF~gTIR~NLdp~---~~------~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
+|++++|+||++.+|.+|+++|+... .. ..++++.++++..++.+.+. +.+...+.+|||||||
T Consensus 84 ~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~Gq~q 156 (251)
T PRK14244 84 LRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELG-------DRLKDSAFELSGGQQQ 156 (251)
T ss_pred HhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhh-------hHhhcChhhCCHHHHH
Confidence 78999999999999999999999632 11 12345778889888865432 2234456789999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
|++||||++++|+||+|||||++||..+.+.+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 157 RLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIF 236 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988778999999999999876 9999999999999999999998
Q ss_pred hcCChHH
Q 000432 1485 EREDSFF 1491 (1513)
Q Consensus 1485 ~~~~~~f 1491 (1513)
+.+...+
T Consensus 237 ~~~~~~~ 243 (251)
T PRK14244 237 KNPQSSK 243 (251)
T ss_pred cCCCChH
Confidence 7765544
No 178
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-39 Score=374.58 Aligned_cols=219 Identities=24% Similarity=0.433 Sum_probs=192.2
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--CCh
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE-----PTMGSIIIDNVDITK--IGL 1332 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e-----p~~G~I~IDGvdI~~--i~l 1332 (1513)
..|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 96 (267)
T PRK14237 19 IALSTKDLHVYYGK--KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINV 96 (267)
T ss_pred eEEEEeeEEEEECC--eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCCh
Confidence 36999999999964 359999999999999999999999999999999999997 589999999999864 346
Q ss_pred HHhhhceEEEcCCCccccCcHhhccCCC----CCC----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHH
Q 000432 1333 HDLRSRLGIIPQDPTLFDGTVRGNLDPL----VQY----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQR 1404 (1513)
Q Consensus 1333 ~~LR~~isiVpQdp~LF~gTIR~NLdp~----~~~----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQR 1404 (1513)
..+|+.++++||++.+|.+|+++|+... +.. .++++.++++.+++.+.+. ........+||||||
T Consensus 97 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~G~~ 169 (267)
T PRK14237 97 YEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVK-------DDLHKSALTLSGGQQ 169 (267)
T ss_pred HHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhh-------hhhcCCcccCCHHHH
Confidence 6789999999999999999999999642 111 2345778888888876553 233456678999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHH
Q 000432 1405 QLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKL 1483 (1513)
Q Consensus 1405 Qrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eL 1483 (1513)
||++||||++++|++|+|||||++||..+...+.+.|++..++.|+|+|+|+++.+.. ||+|++|++|++++.|+++++
T Consensus 170 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 249 (267)
T PRK14237 170 QRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNI 249 (267)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999866 999999999999999999999
Q ss_pred HhcC
Q 000432 1484 LERE 1487 (1513)
Q Consensus 1484 l~~~ 1487 (1513)
.+.+
T Consensus 250 ~~~~ 253 (267)
T PRK14237 250 FTNP 253 (267)
T ss_pred hcCC
Confidence 8754
No 179
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-39 Score=370.01 Aligned_cols=208 Identities=25% Similarity=0.362 Sum_probs=181.3
Q ss_pred eEEEEEEEEEEcCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHH---h
Q 000432 1261 TISFHNLQIRYAEHL--PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHD---L 1335 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~---L 1335 (1513)
.++++||+++|+++. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++..++.+. +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997532 36999999999999999999999999999999999999999999999999999887654 3
Q ss_pred h-hceEEEcCCCccccC-cHhhccCCC---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHH
Q 000432 1336 R-SRLGIIPQDPTLFDG-TVRGNLDPL---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQL 1406 (1513)
Q Consensus 1336 R-~~isiVpQdp~LF~g-TIR~NLdp~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQr 1406 (1513)
| ++++|+||+|.+|.+ |+++|+... ...+ ++++.++++..++.+...+ ...+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANH-----------RPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhC-----------ChhhCCHHHHHH
Confidence 3 679999999999975 999999641 1222 3457788888887654433 335799999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCEEeEecC
Q 000432 1407 FCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDS 1479 (1513)
Q Consensus 1407 l~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gt 1479 (1513)
++||||++++|+||+|||||++||+++...+.+.|++.. +++|+|+|+|+++.+..+|++++|++|+|++.++
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999998863 4799999999999999999999999999998775
No 180
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-39 Score=373.24 Aligned_cols=219 Identities=26% Similarity=0.431 Sum_probs=189.8
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcc---CCC--CCcEEEEcCeeCCCC--ChH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRI---VEP--TMGSIIIDNVDITKI--GLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl---~ep--~~G~I~IDGvdI~~i--~l~ 1333 (1513)
.|+++|++++|++ ..+|+|+||+|++||.+||+|++|||||||+++|.|+ ++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 80 (250)
T PRK14245 3 KIDARDVNFWYGD--FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVD 80 (250)
T ss_pred EEEEEEEEEEECC--EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHH
Confidence 5899999999965 3599999999999999999999999999999999997 444 589999999999764 346
Q ss_pred HhhhceEEEcCCCccccCcHhhccCCC---CC-----CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1334 DLRSRLGIIPQDPTLFDGTVRGNLDPL---VQ-----YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~gTIR~NLdp~---~~-----~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
.+|++++|+||+|.+|.+|+++|+... .. ..+++++++++.+++.+.+.. .....+.+|||||||
T Consensus 81 ~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~q 153 (250)
T PRK14245 81 ELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKD-------KLKESAFALSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhh-------hhhCCcccCCHHHHH
Confidence 788999999999999999999999631 11 123467788888888655432 233456789999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
|++||||++++|+||||||||++||+.+...+.+.|++..+++|||+|+|+++.+.. ||||++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 154 RLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIF 233 (250)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999988778999999999999866 9999999999999999999998
Q ss_pred hcCC
Q 000432 1485 ERED 1488 (1513)
Q Consensus 1485 ~~~~ 1488 (1513)
+++.
T Consensus 234 ~~~~ 237 (250)
T PRK14245 234 TNPE 237 (250)
T ss_pred cCCC
Confidence 7643
No 181
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=9.3e-40 Score=354.78 Aligned_cols=178 Identities=35% Similarity=0.595 Sum_probs=167.3
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|+...+++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQEQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCCCccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEEE
Confidence 579999999976434699999999999999999999999999999999999999999999999998876 6678999999
Q ss_pred EcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000432 1342 IPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILV 1421 (1513)
Q Consensus 1342 VpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILi 1421 (1513)
+||+|.+|++|+++|+ ..+||+|||||++||||++++|++|+
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999997 46799999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCEEeEec
Q 000432 1422 LDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1422 LDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~G 1478 (1513)
|||||++||.++.+.+.+.|++..+++|+|+++|+++.+..||++++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999999887789999999999999899999999999999865
No 182
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=5.9e-40 Score=369.44 Aligned_cols=212 Identities=25% Similarity=0.416 Sum_probs=179.4
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHh-hhceE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDL-RSRLG 1340 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~L-R~~is 1340 (1513)
|+++||+++|+.. ++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+..+. |++++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (222)
T cd03224 1 LEVENLNAGYGKS--QILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIG 78 (222)
T ss_pred CEEeeEEeecCCe--eEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeE
Confidence 5799999999643 59999999999999999999999999999999999999999999999999988877664 67899
Q ss_pred EEcCCCccccC-cHhhccCCCCC-CC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHc
Q 000432 1341 IIPQDPTLFDG-TVRGNLDPLVQ-YS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLL 1414 (1513)
Q Consensus 1341 iVpQdp~LF~g-TIR~NLdp~~~-~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALL 1414 (1513)
|+||++.+|.+ |+++|+..... .. .+++.++++..+ +++........+||||||||++||||++
T Consensus 79 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~laral~ 148 (222)
T cd03224 79 YVPEGRRIFPELTVEENLLLGAYARRRAKRKARLERVYELFP----------RLKERRKQLAGTLSGGEQQMLAIARALM 148 (222)
T ss_pred EeccccccCCCCcHHHHHHHHhhhcCchhHHHHHHHHHHHHH----------hhhhhhhCchhhCCHHHHHHHHHHHHHh
Confidence 99999999987 99999964321 11 112223333321 1222333445679999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHh
Q 000432 1415 KKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1415 r~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
++|++|+|||||++||.++...+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|++++.|+++++.+
T Consensus 149 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 149 SRPKLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred cCCCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999999998765 47899999999999876 99999999999999999988764
No 183
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=1.6e-39 Score=384.27 Aligned_cols=226 Identities=22% Similarity=0.328 Sum_probs=191.0
Q ss_pred eEEEEEEEEEEcCC-----------CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCC
Q 000432 1261 TISFHNLQIRYAEH-----------LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITK 1329 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~-----------~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~ 1329 (1513)
-|+++|++++|+.+ ...+++||||+|++||.+||||+||||||||+++|+|+++|++|+|.+||.|+.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 59999999999631 2359999999999999999999999999999999999999999999999999998
Q ss_pred CChHH---hhhceEEEcCCC--ccc-cCcHhhccCC----C-CCCCH----HHHHHHHHHcCCcHHHHhhhccccchhcc
Q 000432 1330 IGLHD---LRSRLGIIPQDP--TLF-DGTVRGNLDP----L-VQYSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAE 1394 (1513)
Q Consensus 1330 i~l~~---LR~~isiVpQdp--~LF-~gTIR~NLdp----~-~~~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e 1394 (1513)
++.++ +|++++|||||| .|| ..||++|+.. . ...+. +.+.++++.+++.+.+ + ..
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~------~----~~ 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNL------I----NR 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHH------h----cC
Confidence 87654 678999999999 477 5799999852 1 12343 3456678888874311 1 22
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeC
Q 000432 1395 NGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSD 1471 (1513)
Q Consensus 1395 ~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~ 1471 (1513)
...+||||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 3457999999999999999999999999999999999999999999987643 7899999999999986 999999999
Q ss_pred CEEeEecChhHHHhcCChHHHH-HHH
Q 000432 1472 GRIAEYDSPTKLLEREDSFFSQ-LIK 1496 (1513)
Q Consensus 1472 G~IvE~Gtp~eLl~~~~~~f~~-l~~ 1496 (1513)
|+|+|.|+++++++++...|.+ ++.
T Consensus 238 G~ive~g~~~~i~~~~~~py~~~l~~ 263 (331)
T PRK15079 238 GHAVELGTYDEVYHNPLHPYTKALMS 263 (331)
T ss_pred CEEEEEcCHHHHHcCCCCHHHHHHHh
Confidence 9999999999999876555554 444
No 184
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=4.7e-39 Score=371.87 Aligned_cols=239 Identities=38% Similarity=0.664 Sum_probs=205.3
Q ss_pred HHHHHHhcccccccccccccCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcC
Q 000432 604 DRIAAYLQEDEIQRDAVEYVPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGE 683 (1513)
Q Consensus 604 ~RI~~fL~~~e~~~~~~~~~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~ 683 (1513)
+.+.+.|..+..+++. . +.......|+++|+++.+ +++|+|+||+|++|++++|+|+||||||||+++|+|+
T Consensus 15 ~~~~~~~~~~~~~~~~-~--~~~~~~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl 86 (282)
T cd03291 15 EGFGELLEKAKQENND-R--KHSSDDNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGE 86 (282)
T ss_pred HHHHHHHhcccccccc-c--ccCCCCCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCC
Confidence 3456666554432221 1 222345679999999962 4699999999999999999999999999999999999
Q ss_pred ccCCCcEEEECCeEEEEcCCCcccCccHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHH
Q 000432 684 IQKMAGTVKISGTKAYVPQSPWILTGNIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQ 763 (1513)
Q Consensus 684 ~~~~~G~i~~~g~~ayv~Q~~~l~~~ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkq 763 (1513)
++|.+|+|.++|.++|++|++++++.|++||+.++....+.++.+.++++.+.+.++.+|.+.+|.+++++.+|||||||
T Consensus 87 ~~p~~G~I~i~g~i~yv~q~~~l~~~tv~enl~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~q 166 (282)
T cd03291 87 LEPSEGKIKHSGRISFSSQFSWIMPGTIKENIIFGVSYDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRA 166 (282)
T ss_pred CCCCCcEEEECCEEEEEeCcccccccCHHHHhhcccccCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHH
Confidence 99999999999999999999999999999999998655555667778888888888999999999999999999999999
Q ss_pred HHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHH
Q 000432 764 RIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELL 843 (1513)
Q Consensus 764 Ri~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~ 843 (1513)
|++||||++++|+++||||||++||+.+.+.+.+.++..+.+++|+|++||+++.++.||+|++|++|++++.|+++++.
T Consensus 167 rv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 246 (282)
T cd03291 167 RISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQ 246 (282)
T ss_pred HHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 99999999999999999999999999998777765555555689999999999998889999999999999999999987
Q ss_pred hcCccHH
Q 000432 844 KQNIGFE 850 (1513)
Q Consensus 844 ~~~~~~~ 850 (1513)
+....|.
T Consensus 247 ~~~~~~~ 253 (282)
T cd03291 247 SLRPDFS 253 (282)
T ss_pred hcchHHH
Confidence 6544443
No 185
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=372.53 Aligned_cols=223 Identities=26% Similarity=0.448 Sum_probs=191.9
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCCC--ChH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-----TMGSIIIDNVDITKI--GLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-----~~G~I~IDGvdI~~i--~l~ 1333 (1513)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~ 80 (250)
T PRK14262 3 IIEIENFSAYYGE--KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVT 80 (250)
T ss_pred eEEEEeeEEEeCC--ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHH
Confidence 4899999999964 3599999999999999999999999999999999999984 899999999998753 345
Q ss_pred HhhhceEEEcCCCccccCcHhhccCCC----CCC----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1334 DLRSRLGIIPQDPTLFDGTVRGNLDPL----VQY----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~gTIR~NLdp~----~~~----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
.+|++++++||+|.+|..|+++|+... +.. .++++.++++..++.+.+.. .......+|||||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq~q 153 (250)
T PRK14262 81 EYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKS-------ELNKPGTRLSGGQQQ 153 (250)
T ss_pred HhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHH-------HHhCChhhcCHHHHH
Confidence 678999999999999999999999642 111 23456778888888654422 234556789999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
|++||||++++|+||+|||||++||..+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 r~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 154 RLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREIV 233 (250)
T ss_pred HHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHH
Confidence 999999999999999999999999999999999999987778999999999998765 9999999999999999999998
Q ss_pred hcCChHHH
Q 000432 1485 EREDSFFS 1492 (1513)
Q Consensus 1485 ~~~~~~f~ 1492 (1513)
+++...|.
T Consensus 234 ~~~~~~~~ 241 (250)
T PRK14262 234 ERPKNKLT 241 (250)
T ss_pred hCCCChHH
Confidence 76443343
No 186
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1.8e-39 Score=388.28 Aligned_cols=217 Identities=25% Similarity=0.401 Sum_probs=192.8
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhce
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRL 1339 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~i 1339 (1513)
..|+++|++++|.. ..+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.++..++.+ ++++
T Consensus 13 ~~L~l~~l~~~~~~--~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 13 PLVELRGISKSFDG--KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred ceEEEEEEEEEECC--eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 36999999999964 3589999999999999999999999999999999999999999999999999887664 5789
Q ss_pred EEEcCCCccccC-cHhhccCCCC---CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHH
Q 000432 1340 GIIPQDPTLFDG-TVRGNLDPLV---QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGR 1411 (1513)
Q Consensus 1340 siVpQdp~LF~g-TIR~NLdp~~---~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LAR 1411 (1513)
++|+|++.||.. ||++||.+.- ..+ ++++.++++..++.++..+.| .+||||||||++|||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----------~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----------HQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999965 9999997421 222 345778899999988777666 468999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCC
Q 000432 1412 TLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLERED 1488 (1513)
Q Consensus 1412 ALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~ 1488 (1513)
||+++|++|+||||||+||..+...+.+.|++..+ +.|+|+|||+.+.+.. ||+|+||++|+|++.|+|+++.+++.
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p~ 237 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEPK 237 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCcc
Confidence 99999999999999999999999999999988754 7899999999998765 99999999999999999999998876
Q ss_pred hHH
Q 000432 1489 SFF 1491 (1513)
Q Consensus 1489 ~~f 1491 (1513)
..|
T Consensus 238 ~~~ 240 (375)
T PRK09452 238 NLF 240 (375)
T ss_pred cHH
Confidence 444
No 187
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.7e-39 Score=369.01 Aligned_cols=211 Identities=25% Similarity=0.379 Sum_probs=182.7
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|+|+++|++|+|.+||.++.+.+.+. +++++|
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA--RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLGV 78 (236)
T ss_pred EEEEeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEEE
Confidence 789999999964 35999999999999999999999999999999999999999999999999998776544 468999
Q ss_pred EcCCCcc-ccCcHhhccCCCC---CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1342 IPQDPTL-FDGTVRGNLDPLV---QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1342 VpQdp~L-F~gTIR~NLdp~~---~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+||++.+ +..|+++|+.... ..+ ++++.+.++..++.+. ......+||||||||++||||+
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~G~~qrl~laral 147 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIAALLARLGLAER-----------ADDKVRELNGGHRRRVEIARAL 147 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhh-----------hcCChhhCCHHHHHHHHHHHHH
Confidence 9999987 5679999996421 122 2345566666655432 3344568999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhc
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
+++|+||+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+..||+|++|++|++++.|+++++.++
T Consensus 148 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 148 LHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999998875 37899999999999988999999999999999999999865
No 188
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-39 Score=372.75 Aligned_cols=219 Identities=26% Similarity=0.409 Sum_probs=188.7
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC--C---CCcEEEEcCeeCCCC--ChH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE--P---TMGSIIIDNVDITKI--GLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e--p---~~G~I~IDGvdI~~i--~l~ 1333 (1513)
.|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++... +..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14239 5 ILQVSDLSVYYNK--KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTV 82 (252)
T ss_pred eEEEEeeEEEECC--eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchH
Confidence 5899999999964 359999999999999999999999999999999999954 6 499999999999753 345
Q ss_pred HhhhceEEEcCCCccccCcHhhccCCC----CC----CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1334 DLRSRLGIIPQDPTLFDGTVRGNLDPL----VQ----YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~gTIR~NLdp~----~~----~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
.+|++++++||+|.+|+.|+++|+... +. ..++++.++++.+++.+.+. +.......+||+||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~q 155 (252)
T PRK14239 83 DLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVK-------DRLHDSALGLSGGQQQ 155 (252)
T ss_pred hhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHH-------HHHhcCcccCCHHHHH
Confidence 678899999999999999999999631 11 12345667888888765443 2234456789999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
|++||||++++|+||||||||++||.++...+.+.|++..+++|+|+|+|+++.+.. ||||++|++|++++.|+++++.
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 156 RVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999987667999999999998866 9999999999999999999998
Q ss_pred hcCC
Q 000432 1485 ERED 1488 (1513)
Q Consensus 1485 ~~~~ 1488 (1513)
+++.
T Consensus 236 ~~~~ 239 (252)
T PRK14239 236 MNPK 239 (252)
T ss_pred hCCC
Confidence 7643
No 189
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.3e-39 Score=388.35 Aligned_cols=218 Identities=24% Similarity=0.398 Sum_probs=192.4
Q ss_pred CceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCC--cEEEEcCeeCCCCChHHhh
Q 000432 1259 VGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTM--GSIIIDNVDITKIGLHDLR 1336 (1513)
Q Consensus 1259 ~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~--G~I~IDGvdI~~i~l~~LR 1336 (1513)
.|.|+++||+++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++ |+|.+||.++...+. .+
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 3 CGGIRIDHLRVAYGA--NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred ceEEEEEEEEEEECC--eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 478999999999974 359999999999999999999999999999999999999999 999999999987665 35
Q ss_pred hceEEEcCCCccccC-cHhhccCCC---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHH
Q 000432 1337 SRLGIIPQDPTLFDG-TVRGNLDPL---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFC 1408 (1513)
Q Consensus 1337 ~~isiVpQdp~LF~g-TIR~NLdp~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~ 1408 (1513)
+++++|+|++.||.. |+++||.+. ...+ ++++.++++.+++.++..+.| .+||||||||++
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----------~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLP-----------AQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCCh-----------hhCCHHHHHHHH
Confidence 789999999999966 999999742 1223 245777888888887766555 378999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC---CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1409 LGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK---DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1409 LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~---~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
|||||+++|++|+||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||||+||++|++++.|+|+++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999987654 6899999999999866 9999999999999999999999
Q ss_pred hcCChHH
Q 000432 1485 EREDSFF 1491 (1513)
Q Consensus 1485 ~~~~~~f 1491 (1513)
+++...|
T Consensus 228 ~~p~~~~ 234 (362)
T TIGR03258 228 DAPADGF 234 (362)
T ss_pred hCcCcHH
Confidence 8865544
No 190
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=373.98 Aligned_cols=222 Identities=27% Similarity=0.420 Sum_probs=190.1
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCCC--Ch
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-----TMGSIIIDNVDITKI--GL 1332 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-----~~G~I~IDGvdI~~i--~l 1332 (1513)
..|+++|++++|++ .++|+|+||+|++||.+||+|++|||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 11 ~~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 11 PQIKVENLNLWYGE--KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eeEEEeeeEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 36999999999964 3599999999999999999999999999999999999985 799999999998753 34
Q ss_pred HHhhhceEEEcCCCccccCcHhhccCCC---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1333 HDLRSRLGIIPQDPTLFDGTVRGNLDPL---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1333 ~~LR~~isiVpQdp~LF~gTIR~NLdp~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
..+|++++|+||++.+|..|+++|+... ...+ ++++.++++.+++.+.+. ..++ ....+|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~---~~~~----~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETS---DRLK----SPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchh---hhhc----CChhhCCHHHHH
Confidence 5678899999999999999999999632 1222 234677888888754321 2233 345679999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
|++|||||+++|+||+|||||++||.++...+.+.|++..+++|+|+|+|+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987668999999999999876 9999999999999999999998
Q ss_pred hcCChH
Q 000432 1485 EREDSF 1490 (1513)
Q Consensus 1485 ~~~~~~ 1490 (1513)
+++...
T Consensus 242 ~~~~~~ 247 (258)
T PRK14268 242 HNPREK 247 (258)
T ss_pred cCCCCH
Confidence 764433
No 191
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-39 Score=376.80 Aligned_cols=216 Identities=28% Similarity=0.452 Sum_probs=192.2
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCC---cEEEEcCeeCCCCChHHhh
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTM---GSIIIDNVDITKIGLHDLR 1336 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~---G~I~IDGvdI~~i~l~~LR 1336 (1513)
+.|+++|++++|++...++|+|+||+|++||.+||+|++|||||||+++|.|+++|++ |+|.+||.++...+...+|
T Consensus 4 ~~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~ 83 (282)
T PRK13640 4 NIVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIR 83 (282)
T ss_pred ceEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHH
Confidence 4699999999997543459999999999999999999999999999999999999998 8999999999888888889
Q ss_pred hceEEEcCCC--ccccCcHhhccCCC---CCCCH----HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHH
Q 000432 1337 SRLGIIPQDP--TLFDGTVRGNLDPL---VQYSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLF 1407 (1513)
Q Consensus 1337 ~~isiVpQdp--~LF~gTIR~NLdp~---~~~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl 1407 (1513)
++++|+||+| .+++.|+++||.+. ...++ +++.++++.+++.++....| .+||||||||+
T Consensus 84 ~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----------~~LS~G~~qrv 152 (282)
T PRK13640 84 EKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----------ANLSGGQKQRV 152 (282)
T ss_pred hheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHH
Confidence 9999999999 46788999999742 12333 34778899999877655444 57999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHh
Q 000432 1408 CLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1408 ~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
+|||||+.+|++|||||||++||..+...+.+.|++..+ ++|||+++|+++.+..||+|++|++|++++.|+++++.+
T Consensus 153 ~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 232 (282)
T PRK13640 153 AIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFS 232 (282)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 999999999999999999999999999999999988753 789999999999998899999999999999999999876
Q ss_pred c
Q 000432 1486 R 1486 (1513)
Q Consensus 1486 ~ 1486 (1513)
.
T Consensus 233 ~ 233 (282)
T PRK13640 233 K 233 (282)
T ss_pred C
Confidence 4
No 192
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-39 Score=372.37 Aligned_cols=220 Identities=24% Similarity=0.421 Sum_probs=189.4
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC--C---CCcEEEEcCeeCCC--CChH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE--P---TMGSIIIDNVDITK--IGLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e--p---~~G~I~IDGvdI~~--i~l~ 1333 (1513)
.|+++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 12 ~l~i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~ 89 (259)
T PRK14274 12 VYQINGMNLWYGQ--HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLV 89 (259)
T ss_pred eEEEeeEEEEECC--eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHH
Confidence 5999999999974 359999999999999999999999999999999999997 3 59999999999864 4556
Q ss_pred HhhhceEEEcCCCccccCcHhhccCCCC----CCCH----HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1334 DLRSRLGIIPQDPTLFDGTVRGNLDPLV----QYSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~gTIR~NLdp~~----~~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
.+|++++|+||+|.+|.+|+++|+.... ..++ +++.++++..++.+.+.. .....+.+|||||||
T Consensus 90 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~l~~~~~~LS~Gq~q 162 (259)
T PRK14274 90 ELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKD-------RLHTQALSLSGGQQQ 162 (259)
T ss_pred HHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHH
Confidence 7889999999999999999999996321 1122 345667778887655422 223456789999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
|++||||++++|+||+|||||++||.++...+.+.|++..+++|+|+|+|+++.+.. ||||++|++|++++.|+++++.
T Consensus 163 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 163 RLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMF 242 (259)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 999999999999999999999999999999999999988778999999999999876 9999999999999999999988
Q ss_pred hcCCh
Q 000432 1485 EREDS 1489 (1513)
Q Consensus 1485 ~~~~~ 1489 (1513)
+++..
T Consensus 243 ~~~~~ 247 (259)
T PRK14274 243 SNPDD 247 (259)
T ss_pred hCCCC
Confidence 76443
No 193
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-39 Score=383.04 Aligned_cols=227 Identities=26% Similarity=0.374 Sum_probs=191.4
Q ss_pred eEEEEEEEEEEcCC--------CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCh
Q 000432 1261 TISFHNLQIRYAEH--------LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGL 1332 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~--------~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l 1332 (1513)
.|+++|++++|+.. ...+|+||||+|++||++||||+||||||||+++|.|+++|++|+|.+||.|+.+++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 58999999999631 2369999999999999999999999999999999999999999999999999998875
Q ss_pred H---HhhhceEEEcCCCc--ccc-CcHhhccC-C---CCCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCC
Q 000432 1333 H---DLRSRLGIIPQDPT--LFD-GTVRGNLD-P---LVQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGEN 1398 (1513)
Q Consensus 1333 ~---~LR~~isiVpQdp~--LF~-gTIR~NLd-p---~~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~n 1398 (1513)
. .+|+++++|||||. |+. -||.+|+. + ....+ .+++.++++.+++.+ ..++.. ...
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~------~~~~~~----p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRP------EHYDRY----PHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCCh------HHhcCC----Ccc
Confidence 4 56889999999994 554 48888874 1 11122 345788899988853 123333 357
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEe
Q 000432 1399 WSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIA 1475 (1513)
Q Consensus 1399 LSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~Iv 1475 (1513)
||||||||++|||||+.+|+|||+||||++||..+.+.|.+.|++..+ ++|+|+|||+++.+.. ||+|+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999987643 7899999999999976 9999999999999
Q ss_pred EecChhHHHhcCChHHHH-HHHH
Q 000432 1476 EYDSPTKLLEREDSFFSQ-LIKE 1497 (1513)
Q Consensus 1476 E~Gtp~eLl~~~~~~f~~-l~~~ 1497 (1513)
|.|+++++++++...|.+ |++.
T Consensus 235 e~g~~~~~~~~p~hpyt~~ll~~ 257 (327)
T PRK11308 235 EKGTKEQIFNNPRHPYTQALLSA 257 (327)
T ss_pred EECCHHHHhcCCCCHHHHHHHHh
Confidence 999999999876554554 4443
No 194
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-39 Score=376.05 Aligned_cols=215 Identities=26% Similarity=0.380 Sum_probs=190.6
Q ss_pred eEEEEEEEEEEcCC-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhce
Q 000432 1261 TISFHNLQIRYAEH-LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRL 1339 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~i 1339 (1513)
.|+++||+++|+.. ..++|+|+||+|++||.+||+|++|||||||+++|+|+++|++|+|.+||.++.+.+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743 24599999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEEcCCC--ccccCcHhhccCCC---CCCCHH----HHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHH
Q 000432 1340 GIIPQDP--TLFDGTVRGNLDPL---VQYSDK----QVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLG 1410 (1513)
Q Consensus 1340 siVpQdp--~LF~gTIR~NLdp~---~~~sde----ei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LA 1410 (1513)
+|+||+| .+++.|+.+||... ...+++ ++.++++.+++.++..+. ...||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTRE-----------PARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCC-----------cccCCHHHHHHHHHH
Confidence 9999998 47788999999642 123333 356788888887654432 357999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhc
Q 000432 1411 RTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1411 RALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
|||+++|+||||||||++||+++.+.+.+.|++..+ ++|+|+|+|+++.+..||+|++|++|++++.|++++++++
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999987753 7899999999999988999999999999999999998875
No 195
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-39 Score=376.67 Aligned_cols=214 Identities=26% Similarity=0.407 Sum_probs=189.7
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.++++||+++|+.+. ++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+...++++++
T Consensus 3 ~l~~~~l~~~~~~~~-~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (277)
T PRK13652 3 LIETRDLCYSYSGSK-EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVG 81 (277)
T ss_pred eEEEEEEEEEeCCCC-ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheE
Confidence 378999999996433 4999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEcCCC--ccccCcHhhccCCCC---CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHH
Q 000432 1341 IIPQDP--TLFDGTVRGNLDPLV---QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGR 1411 (1513)
Q Consensus 1341 iVpQdp--~LF~gTIR~NLdp~~---~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LAR 1411 (1513)
++||+| .+|+.|+++|+.... ..+ ++.+.++++.+++.+...+.| ..||||||||++|||
T Consensus 82 ~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Gq~qrl~lar 150 (277)
T PRK13652 82 LVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVP-----------HHLSGGEKKRVAIAG 150 (277)
T ss_pred EEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCc-----------ccCCHHHHHHHHHHH
Confidence 999998 478899999996321 223 245788889988876654443 479999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHh-hcCEEEEEeCCEEeEecChhHHHhc
Q 000432 1412 TLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVI-DSDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1412 ALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~-~~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
||+.+|++|||||||++||+.+.+.+.+.+++..+ ++|+|+++|+++.+. .||||++|++|++++.|+++++++.
T Consensus 151 aL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 151 VIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 99999999999999999999999999999987653 789999999999996 4999999999999999999999865
No 196
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=2.2e-39 Score=372.70 Aligned_cols=217 Identities=27% Similarity=0.419 Sum_probs=188.3
Q ss_pred CceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC-------
Q 000432 1259 VGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIG------- 1331 (1513)
Q Consensus 1259 ~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~------- 1331 (1513)
.+.|+++||+++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..+.
T Consensus 3 ~~~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 3 ENKLNVIDLHKRYGE--HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred CccEEEeeeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 467999999999974 35999999999999999999999999999999999999999999999999986531
Q ss_pred ------hHHhhhceEEEcCCCccccC-cHhhccCCC----CCC----CHHHHHHHHHHcCCcHHHHhhhccccchhccCC
Q 000432 1332 ------LHDLRSRLGIIPQDPTLFDG-TVRGNLDPL----VQY----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENG 1396 (1513)
Q Consensus 1332 ------l~~LR~~isiVpQdp~LF~g-TIR~NLdp~----~~~----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G 1396 (1513)
...+|++++|+||++.+|.+ |+++|+... ... .++++.++++..++.+... ....
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~----------~~~~ 150 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQ----------GKYP 150 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhh----------hCCc
Confidence 35678899999999999975 999999631 111 2345777888888765431 2345
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEE
Q 000432 1397 ENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRI 1474 (1513)
Q Consensus 1397 ~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~I 1474 (1513)
..||||||||++|||||+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|+|+++.+.+ ||||++|++|++
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i 230 (257)
T PRK10619 151 VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKI 230 (257)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEE
Confidence 6799999999999999999999999999999999999999999998764 48999999999999987 999999999999
Q ss_pred eEecChhHHHhcC
Q 000432 1475 AEYDSPTKLLERE 1487 (1513)
Q Consensus 1475 vE~Gtp~eLl~~~ 1487 (1513)
++.|+++++.+.+
T Consensus 231 ~~~~~~~~~~~~~ 243 (257)
T PRK10619 231 EEEGAPEQLFGNP 243 (257)
T ss_pred EEeCCHHHhhhCc
Confidence 9999999988654
No 197
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-39 Score=380.16 Aligned_cols=215 Identities=23% Similarity=0.355 Sum_probs=185.0
Q ss_pred eEEEEEEEEEEcCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCC--------
Q 000432 1261 TISFHNLQIRYAEHL---PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITK-------- 1329 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~-------- 1329 (1513)
.|+++||+++|+... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 389999999997542 259999999999999999999999999999999999999999999999987632
Q ss_pred ----------------CChHHhhhceEEEcCCC--ccccCcHhhccCCCC---CCC----HHHHHHHHHHcCCc-HHHHh
Q 000432 1330 ----------------IGLHDLRSRLGIIPQDP--TLFDGTVRGNLDPLV---QYS----DKQVWEALDKCQLG-DLVRA 1383 (1513)
Q Consensus 1330 ----------------i~l~~LR~~isiVpQdp--~LF~gTIR~NLdp~~---~~s----deei~~aL~~~~l~-~~I~~ 1383 (1513)
.+...+|++++||||+| .+|..|+++||.+.. ..+ ++++.++++.+++. ++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~- 160 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDESYLQ- 160 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhh-
Confidence 13467899999999987 688899999997431 223 34567788888875 3332
Q ss_pred hhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh
Q 000432 1384 KEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID 1462 (1513)
Q Consensus 1384 lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~ 1462 (1513)
....+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. .++|||+|+|+++.+..
T Consensus 161 ----------~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~ 230 (305)
T PRK13651 161 ----------RSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLE 230 (305)
T ss_pred ----------CChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHH
Confidence 3345799999999999999999999999999999999999999999998764 47999999999998755
Q ss_pred -cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1463 -SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1463 -~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
||||++|++|++++.|+++++.++
T Consensus 231 ~adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 231 WTKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred hCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999998875
No 198
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=8.5e-40 Score=367.07 Aligned_cols=202 Identities=28% Similarity=0.408 Sum_probs=175.3
Q ss_pred EEEEEEEEEEcCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHH----h
Q 000432 1262 ISFHNLQIRYAEHL--PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHD----L 1335 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~----L 1335 (1513)
|+++||+++|+++. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999997531 35999999999999999999999999999999999999999999999999998877443 4
Q ss_pred hhceEEEcCCCccccC-cHhhccCCC---CCC----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHH
Q 000432 1336 RSRLGIIPQDPTLFDG-TVRGNLDPL---VQY----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLF 1407 (1513)
Q Consensus 1336 R~~isiVpQdp~LF~g-TIR~NLdp~---~~~----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl 1407 (1513)
|++++|+||+|.+|.+ |+++|+... ... .++++.++++..++.+...+ ...+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNH-----------YPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhc-----------ChhhcCHHHHHHH
Confidence 6789999999999986 999999642 111 13467778888877655433 2357999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCEE
Q 000432 1408 CLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVIDSDLVLVLSDGRI 1474 (1513)
Q Consensus 1408 ~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~~DrIlVLd~G~I 1474 (1513)
+|||||+++|+||+|||||++||+++.+.+.+.|++..+ ++|+|+|+|+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999999999999999999999998754 7899999999999888999999999974
No 199
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.9e-39 Score=372.19 Aligned_cols=214 Identities=24% Similarity=0.436 Sum_probs=186.1
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC----------
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIG---------- 1331 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~---------- 1331 (1513)
|+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++
T Consensus 1 i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 78 (252)
T TIGR03005 1 VRFSDVTKRFGI--LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPAD 78 (252)
T ss_pred CEEEEEEEEeCC--eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccc
Confidence 579999999964 35999999999999999999999999999999999999999999999999997653
Q ss_pred ---hHHhhhceEEEcCCCcccc-CcHhhccCCC----CCC----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCC
Q 000432 1332 ---LHDLRSRLGIIPQDPTLFD-GTVRGNLDPL----VQY----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENW 1399 (1513)
Q Consensus 1332 ---l~~LR~~isiVpQdp~LF~-gTIR~NLdp~----~~~----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nL 1399 (1513)
...+|++++++||++.+|. .|+++|+... ... .++++.++++..++.+...+ ....|
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~L 147 (252)
T TIGR03005 79 EKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADH-----------MPAQL 147 (252)
T ss_pred hhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhc-----------Chhhc
Confidence 2467889999999999885 7999999641 111 23456778888877655443 33579
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeE
Q 000432 1400 SVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAE 1476 (1513)
Q Consensus 1400 SgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE 1476 (1513)
|||||||++||||++++|++|+|||||++||+.+...+.+.|++..+ ++|+|+|+|+++.+.+ ||++++|++|++++
T Consensus 148 S~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 227 (252)
T TIGR03005 148 SGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVE 227 (252)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999988653 7899999999999965 99999999999999
Q ss_pred ecChhHHHhcCC
Q 000432 1477 YDSPTKLLERED 1488 (1513)
Q Consensus 1477 ~Gtp~eLl~~~~ 1488 (1513)
.|+++++.+.+.
T Consensus 228 ~g~~~~~~~~~~ 239 (252)
T TIGR03005 228 QGKPDEIFRQPK 239 (252)
T ss_pred eCCHHHHhcCCC
Confidence 999999987643
No 200
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-39 Score=369.90 Aligned_cols=221 Identities=27% Similarity=0.453 Sum_probs=190.7
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCC--CCh
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-----TMGSIIIDNVDITK--IGL 1332 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-----~~G~I~IDGvdI~~--i~l 1332 (1513)
|.|+++||+++|++ .++|+|+||+|++||.+||+|++|||||||+++|.|+++| ++|+|.+||.++.+ .+.
T Consensus 2 ~~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 2 GKISVKDLDLFYGD--FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred CeEEEEEEEEEECC--ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 57999999999974 3599999999999999999999999999999999999863 69999999999875 456
Q ss_pred HHhhhceEEEcCCCccccCcHhhccCCCC---CC-----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHH
Q 000432 1333 HDLRSRLGIIPQDPTLFDGTVRGNLDPLV---QY-----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQR 1404 (1513)
Q Consensus 1333 ~~LR~~isiVpQdp~LF~gTIR~NLdp~~---~~-----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQR 1404 (1513)
..+|++++++||+|.+|..|+++|+.... .. .++++.++++.+++.+.+. ........+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCHHHH
Confidence 67899999999999999999999996421 11 2345677788887765443 223345678999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHH
Q 000432 1405 QLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKL 1483 (1513)
Q Consensus 1405 Qrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eL 1483 (1513)
||++||||++.+|++|+|||||++||+.+...+.+.|++..+++|+|+++|+++.+.+ ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 232 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDL 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987668999999999998876 999999999999999999998
Q ss_pred HhcCCh
Q 000432 1484 LEREDS 1489 (1513)
Q Consensus 1484 l~~~~~ 1489 (1513)
..++..
T Consensus 233 ~~~~~~ 238 (250)
T PRK14240 233 FTNPKD 238 (250)
T ss_pred HhCCCC
Confidence 865433
No 201
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=2.2e-39 Score=389.34 Aligned_cols=220 Identities=25% Similarity=0.420 Sum_probs=194.9
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++|++++|+. ..+|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++.+++..++|++++
T Consensus 3 ~L~~~nls~~y~~--~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig 80 (402)
T PRK09536 3 MIDVSDLSVEFGD--TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVA 80 (402)
T ss_pred eEEEeeEEEEECC--EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceE
Confidence 4899999999964 36999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCcc-ccCcHhhccCCCC-----------CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHH
Q 000432 1341 IIPQDPTL-FDGTVRGNLDPLV-----------QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFC 1408 (1513)
Q Consensus 1341 iVpQdp~L-F~gTIR~NLdp~~-----------~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~ 1408 (1513)
+|||++.+ |+.|+++|+.... ..+++.+.++++.+++.++..+ . ..+||||||||++
T Consensus 81 ~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~-------~----~~~LSgGerQRv~ 149 (402)
T PRK09536 81 SVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADR-------P----VTSLSGGERQRVL 149 (402)
T ss_pred EEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcC-------C----hhhCCHHHHHHHH
Confidence 99999987 6789999995421 1224568899999999876533 2 3579999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1409 LGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1409 LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
|||||+++|+||+|||||++||+.+...+.+.|++.. +++|+|+++|+++.+.. ||||++|++|++++.|+|++++..
T Consensus 150 IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 150 LARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 9999999999999999999999999999999999875 47899999999999955 999999999999999999999865
Q ss_pred CChHHHHHH
Q 000432 1487 EDSFFSQLI 1495 (1513)
Q Consensus 1487 ~~~~f~~l~ 1495 (1513)
....+++
T Consensus 230 --~~l~~~~ 236 (402)
T PRK09536 230 --DTLRAAF 236 (402)
T ss_pred --HHHHHHh
Confidence 3444444
No 202
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-39 Score=378.82 Aligned_cols=216 Identities=27% Similarity=0.418 Sum_probs=185.7
Q ss_pred eEEEEEEEEEEcCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCC----CChH
Q 000432 1261 TISFHNLQIRYAEHL---PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITK----IGLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~----i~l~ 1333 (1513)
.|+++|++++|++.. .++|+||||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.. .+..
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (290)
T PRK13634 2 DITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLK 81 (290)
T ss_pred EEEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 389999999996432 359999999999999999999999999999999999999999999999999963 4566
Q ss_pred HhhhceEEEcCCC--ccccCcHhhccCCCC---CCCH----HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHH
Q 000432 1334 DLRSRLGIIPQDP--TLFDGTVRGNLDPLV---QYSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQR 1404 (1513)
Q Consensus 1334 ~LR~~isiVpQdp--~LF~gTIR~NLdp~~---~~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQR 1404 (1513)
..|++++||||+| .+|+.|+++|+.+.. ..+. +.+.++++.+++.+.+ .+ ....+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~------~~----~~~~~LSgGq~ 151 (290)
T PRK13634 82 PLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEEL------LA----RSPFELSGGQM 151 (290)
T ss_pred HHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhh------hh----CCcccCCHHHH
Confidence 7889999999998 688899999996321 2233 3456677888875322 12 23457999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChh
Q 000432 1405 QLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPT 1481 (1513)
Q Consensus 1405 Qrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~ 1481 (1513)
||++|||||+.+|+||||||||++||+.+...+.+.|++..+ +.|||+|+|+++.+.. ||||++|++|++++.|+++
T Consensus 152 qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~ 231 (290)
T PRK13634 152 RRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPR 231 (290)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 999999999999999999999999999999999999988653 7899999999999865 9999999999999999999
Q ss_pred HHHhc
Q 000432 1482 KLLER 1486 (1513)
Q Consensus 1482 eLl~~ 1486 (1513)
++.++
T Consensus 232 ~~~~~ 236 (290)
T PRK13634 232 EIFAD 236 (290)
T ss_pred HHhcC
Confidence 98765
No 203
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-39 Score=390.15 Aligned_cols=216 Identities=26% Similarity=0.401 Sum_probs=189.0
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. +++++
T Consensus 3 ~l~i~~l~~~~~~--~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i~ 78 (369)
T PRK11000 3 SVTLRNVTKAYGD--VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGVG 78 (369)
T ss_pred EEEEEEEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCEE
Confidence 4899999999964 3599999999999999999999999999999999999999999999999999876653 56899
Q ss_pred EEcCCCccccC-cHhhccCCCC---CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHH
Q 000432 1341 IIPQDPTLFDG-TVRGNLDPLV---QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRT 1412 (1513)
Q Consensus 1341 iVpQdp~LF~g-TIR~NLdp~~---~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARA 1412 (1513)
||||++.+|.. |+++|+.+.. ..+ ++++.++++..++.++..+.| .+||||||||++||||
T Consensus 79 ~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----------~~LSgGq~QRvaLAra 147 (369)
T PRK11000 79 MVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKP-----------KALSGGQRQRVAIGRT 147 (369)
T ss_pred EEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCCh-----------hhCCHHHHHHHHHHHH
Confidence 99999999965 9999997421 122 345788889888876554443 4699999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCCh
Q 000432 1413 LLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLEREDS 1489 (1513)
Q Consensus 1413 LLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~~ 1489 (1513)
|+++|+||+||||||+||..+.+.+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++..
T Consensus 148 L~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~p~~ 227 (369)
T PRK11000 148 LVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPAN 227 (369)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCccc
Confidence 9999999999999999999999999999987643 7899999999998876 999999999999999999999887654
Q ss_pred HH
Q 000432 1490 FF 1491 (1513)
Q Consensus 1490 ~f 1491 (1513)
.|
T Consensus 228 ~~ 229 (369)
T PRK11000 228 RF 229 (369)
T ss_pred HH
Confidence 43
No 204
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-39 Score=370.53 Aligned_cols=222 Identities=25% Similarity=0.423 Sum_probs=193.1
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--CChH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE-----PTMGSIIIDNVDITK--IGLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e-----p~~G~I~IDGvdI~~--i~l~ 1333 (1513)
.++++||+++|++ .++|+|+||+|++||.+||+|++|||||||+++|+|+.+ |++|+|.+||.+++. .+..
T Consensus 3 ~l~~~~v~~~~~~--~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~ 80 (250)
T PRK14266 3 RIEVENLNTYFDD--AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDVV 80 (250)
T ss_pred EEEEEeEEEEeCC--eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccHH
Confidence 4789999999974 359999999999999999999999999999999999975 389999999999876 3467
Q ss_pred HhhhceEEEcCCCccccCcHhhccCCC-C--CC-C----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1334 DLRSRLGIIPQDPTLFDGTVRGNLDPL-V--QY-S----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~gTIR~NLdp~-~--~~-s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
.+|++++|+||+|.+|.+|+++|+... . .. + ++++.++++.+++.+++..+ ....+.+||+||||
T Consensus 81 ~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LS~Gq~q 153 (250)
T PRK14266 81 ELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDK-------LDKSALGLSGGQQQ 153 (250)
T ss_pred HHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHH-------HhCCcccCCHHHHH
Confidence 789999999999999999999999632 1 11 2 24567788999987765432 23456789999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
|+|||||++++|+||+|||||++||..+...+.+.|++..+++|+|+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 rv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14266 154 RLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQIF 233 (250)
T ss_pred HHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988778999999999999887 8999999999999999999998
Q ss_pred hcCChHH
Q 000432 1485 EREDSFF 1491 (1513)
Q Consensus 1485 ~~~~~~f 1491 (1513)
..+.+.+
T Consensus 234 ~~~~~~~ 240 (250)
T PRK14266 234 INPKDKR 240 (250)
T ss_pred hCCCChH
Confidence 7655544
No 205
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.4e-39 Score=361.67 Aligned_cols=198 Identities=24% Similarity=0.409 Sum_probs=174.7
Q ss_pred EEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEE
Q 000432 1263 SFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGII 1342 (1513)
Q Consensus 1263 ~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiV 1342 (1513)
+++|++++|+.. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.. ...|++++|+
T Consensus 1 ~~~~l~~~~~~~-~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~ 76 (205)
T cd03226 1 RIENISFSYKKG-TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYV 76 (205)
T ss_pred CcccEEEEeCCc-CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEE
Confidence 468999999652 359999999999999999999999999999999999999999999999999864 4577889999
Q ss_pred cCCC--ccccCcHhhccCCCC---CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCC
Q 000432 1343 PQDP--TLFDGTVRGNLDPLV---QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKS 1417 (1513)
Q Consensus 1343 pQdp--~LF~gTIR~NLdp~~---~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~ 1417 (1513)
||+| .+|+.|+++|+.... ...++++.++++.+++.++..+.| ..||||||||++||||++++|
T Consensus 77 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral~~~p 145 (205)
T cd03226 77 MQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----------LSLSGGQKQRLAIAAALLSGK 145 (205)
T ss_pred ecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----------hhCCHHHHHHHHHHHHHHhCC
Confidence 9998 478899999997431 123457889999999987655444 369999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEe
Q 000432 1418 SILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIA 1475 (1513)
Q Consensus 1418 ~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~Iv 1475 (1513)
++|+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.. ||+|++|++|+++
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 146 DLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999999999999998763 57899999999999976 9999999999985
No 206
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=2.6e-39 Score=374.23 Aligned_cols=223 Identities=24% Similarity=0.362 Sum_probs=190.7
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChH---Hhhh
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLH---DLRS 1337 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~---~LR~ 1337 (1513)
.|+++||+++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++..++.. .+|+
T Consensus 7 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 84 (269)
T PRK11831 7 LVDMRGVSFTRGN--RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRK 84 (269)
T ss_pred eEEEeCeEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhh
Confidence 5999999999964 3599999999999999999999999999999999999999999999999999877653 3578
Q ss_pred ceEEEcCCCccccC-cHhhccCCC----CCCCH----HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHH
Q 000432 1338 RLGIIPQDPTLFDG-TVRGNLDPL----VQYSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFC 1408 (1513)
Q Consensus 1338 ~isiVpQdp~LF~g-TIR~NLdp~----~~~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~ 1408 (1513)
+++|+||++.+|.+ |+++|+... ...+. +++.++++..++.+.... ...+||||||||++
T Consensus 85 ~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qrv~ 153 (269)
T PRK11831 85 RMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKL-----------MPSELSGGMARRAA 153 (269)
T ss_pred cEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHHHH
Confidence 89999999999986 999999631 11222 345667777777554322 23579999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHh
Q 000432 1409 LGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1409 LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
||||++++|++|||||||++||+++.+.+.+.|++..+ ++|+|+|+|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 233 (269)
T PRK11831 154 LARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQA 233 (269)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999988643 7899999999999877 99999999999999999999987
Q ss_pred cCChHHHHHHH
Q 000432 1486 REDSFFSQLIK 1496 (1513)
Q Consensus 1486 ~~~~~f~~l~~ 1496 (1513)
+++..++.++.
T Consensus 234 ~~~~~~~~~~~ 244 (269)
T PRK11831 234 NPDPRVRQFLD 244 (269)
T ss_pred CCcHHHHHHHH
Confidence 65445555554
No 207
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=3.6e-39 Score=372.39 Aligned_cols=225 Identities=24% Similarity=0.341 Sum_probs=189.6
Q ss_pred eEEEEEEEEEEcCC-------CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChH
Q 000432 1261 TISFHNLQIRYAEH-------LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~-------~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~ 1333 (1513)
.|+++||+++|++. ...+|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++..++.+
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~ 81 (265)
T TIGR02769 2 LLEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRK 81 (265)
T ss_pred eEEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHH
Confidence 37899999999642 34699999999999999999999999999999999999999999999999999887765
Q ss_pred H---hhhceEEEcCCCc--cc-cCcHhhccCC----CCC----CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCC
Q 000432 1334 D---LRSRLGIIPQDPT--LF-DGTVRGNLDP----LVQ----YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENW 1399 (1513)
Q Consensus 1334 ~---LR~~isiVpQdp~--LF-~gTIR~NLdp----~~~----~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nL 1399 (1513)
+ +|++++++||+|. ++ ..|+++|+.. ... ..++++.++++..++.+.. ....+.+|
T Consensus 82 ~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~----------~~~~~~~L 151 (265)
T TIGR02769 82 QRRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSED----------ADKLPRQL 151 (265)
T ss_pred HHHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhh----------hhCChhhC
Confidence 4 6788999999983 44 4699999842 111 1234677788887774211 12345679
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeE
Q 000432 1400 SVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAE 1476 (1513)
Q Consensus 1400 SgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE 1476 (1513)
|||||||++||||++.+|+||+|||||++||+++...+.+.|++..+ ++|+|+|+|+++.+.. ||+|++|++|++++
T Consensus 152 SgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~ 231 (265)
T TIGR02769 152 SGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVE 231 (265)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999987653 7899999999999975 99999999999999
Q ss_pred ecChhHHHhcCChHHHHHH
Q 000432 1477 YDSPTKLLEREDSFFSQLI 1495 (1513)
Q Consensus 1477 ~Gtp~eLl~~~~~~f~~l~ 1495 (1513)
.|+++++.+.++.+++++.
T Consensus 232 ~g~~~~~~~~~~~~~~~~~ 250 (265)
T TIGR02769 232 ECDVAQLLSFKHPAGRNLQ 250 (265)
T ss_pred ECCHHHHcCCCCHHHHHHH
Confidence 9999999876455555554
No 208
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-39 Score=363.38 Aligned_cols=202 Identities=30% Similarity=0.464 Sum_probs=179.0
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++||+++|+.. ++|+|+||++++| ++||+|++|||||||+++|.|+++|++|+|.+||.++.+.+ ..+|+++++
T Consensus 1 i~~~~~~~~~~~~--~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGKK--RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECCE--EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEE
Confidence 5799999999643 5999999999999 99999999999999999999999999999999999998877 778999999
Q ss_pred EcCCCccccC-cHhhccCCC---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1342 IPQDPTLFDG-TVRGNLDPL---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1342 VpQdp~LF~g-TIR~NLdp~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+||+|.+|.+ |+++|+... ...+ ++++.++++..++.+.. |+.+ .+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRA-------KKKI----GSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHH-------hCch----hhCCHHHHHHHHHHHHH
Confidence 9999999986 999998631 1122 34677888888886553 2332 46999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEec
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~G 1478 (1513)
+++|++|+|||||++||+.+.+.+.+.|++..+++|+|+|+|+++.+.. ||||++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999999999999987777999999999999975 9999999999999865
No 209
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-39 Score=369.38 Aligned_cols=222 Identities=24% Similarity=0.453 Sum_probs=191.1
Q ss_pred CceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC--C---CCcEEEEcCeeCCCC--C
Q 000432 1259 VGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE--P---TMGSIIIDNVDITKI--G 1331 (1513)
Q Consensus 1259 ~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e--p---~~G~I~IDGvdI~~i--~ 1331 (1513)
+|.|+++|++++|++ .++|+|+||+|++||.+||+|++|||||||+++|.|+++ | ++|+|.+||.++... .
T Consensus 2 ~~~l~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 2 NNKVKLEQLNVHFGK--NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred CcEEEEEEEEEEeCC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 467999999999974 359999999999999999999999999999999999986 4 689999999999753 4
Q ss_pred hHHhhhceEEEcCCCcccc-CcHhhccCCC----CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChh
Q 000432 1332 LHDLRSRLGIIPQDPTLFD-GTVRGNLDPL----VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVG 1402 (1513)
Q Consensus 1332 l~~LR~~isiVpQdp~LF~-gTIR~NLdp~----~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgG 1402 (1513)
...+|++++++||++.+|. .|+++|+... +..+ ++++.++++.+++.+.+..+ ....+.+||||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-------~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDR-------LKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHH-------hhCCcCcCCHH
Confidence 4578899999999999998 5999999631 1112 24567788888886654322 23356789999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChh
Q 000432 1403 QRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPT 1481 (1513)
Q Consensus 1403 QRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~ 1481 (1513)
||||++||||++++|++|||||||++||..+...+.+.|++..+++|+|+++|+++.+.. ||+|++|++|+|++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988778899999999999865 9999999999999999999
Q ss_pred HHHhcCCh
Q 000432 1482 KLLEREDS 1489 (1513)
Q Consensus 1482 eLl~~~~~ 1489 (1513)
++...+..
T Consensus 233 ~~~~~~~~ 240 (252)
T PRK14256 233 KIFTTPEK 240 (252)
T ss_pred HHHhCCCc
Confidence 99876443
No 210
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-39 Score=372.78 Aligned_cols=220 Identities=26% Similarity=0.413 Sum_probs=192.4
Q ss_pred CceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCC--CC
Q 000432 1259 VGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-----TMGSIIIDNVDITK--IG 1331 (1513)
Q Consensus 1259 ~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-----~~G~I~IDGvdI~~--i~ 1331 (1513)
.+.|+++|++++|++ .++|+|+||+|++||.+||+|++|||||||+++|.|+++| ++|+|.+||.|+.. .+
T Consensus 23 ~~~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~ 100 (272)
T PRK14236 23 QTALEVRNLNLFYGD--KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVD 100 (272)
T ss_pred CcEEEEEEEEEEECC--eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccC
Confidence 457999999999964 3599999999999999999999999999999999999984 89999999999975 44
Q ss_pred hHHhhhceEEEcCCCccccCcHhhccCCC---CC-CC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhH
Q 000432 1332 LHDLRSRLGIIPQDPTLFDGTVRGNLDPL---VQ-YS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQ 1403 (1513)
Q Consensus 1332 l~~LR~~isiVpQdp~LF~gTIR~NLdp~---~~-~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQ 1403 (1513)
...+|++++|+||++.+|.+|+++|+... .. .. ++++.++++.+++.+.+.. .....+.+|||||
T Consensus 101 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~Gq 173 (272)
T PRK14236 101 VAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKD-------RLHENAFGLSGGQ 173 (272)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHH-------HhhCCcccCCHHH
Confidence 56789999999999999999999999642 11 11 3457788888888765432 3345567899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhH
Q 000432 1404 RQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTK 1482 (1513)
Q Consensus 1404 RQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~e 1482 (1513)
|||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+++|+++.+.. ||||++|++|++++.|++++
T Consensus 174 ~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 253 (272)
T PRK14236 174 QQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDT 253 (272)
T ss_pred HHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHH
Confidence 99999999999999999999999999999999999999988778999999999999876 99999999999999999999
Q ss_pred HHhcC
Q 000432 1483 LLERE 1487 (1513)
Q Consensus 1483 Ll~~~ 1487 (1513)
+.+++
T Consensus 254 ~~~~~ 258 (272)
T PRK14236 254 LFTSP 258 (272)
T ss_pred HhcCC
Confidence 98654
No 211
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-39 Score=375.71 Aligned_cols=215 Identities=21% Similarity=0.375 Sum_probs=190.0
Q ss_pred eEEEEEEEEEEcCC----CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC-hHHh
Q 000432 1261 TISFHNLQIRYAEH----LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIG-LHDL 1335 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~----~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~-l~~L 1335 (1513)
-|+++|++++|+.. .+++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 58999999999743 246999999999999999999999999999999999999999999999999998654 4568
Q ss_pred hhceEEEcCCCc--cccCcHhhccCCCC---CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHH
Q 000432 1336 RSRLGIIPQDPT--LFDGTVRGNLDPLV---QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQL 1406 (1513)
Q Consensus 1336 R~~isiVpQdp~--LF~gTIR~NLdp~~---~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQr 1406 (1513)
|++++++||+|. +|..|+++|+.+.. ..+ ++++.++++.+++.++..+.| .+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----------~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----------HLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----------ccCCHHHHHH
Confidence 899999999984 77779999996431 122 456788899999877665544 4799999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHH
Q 000432 1407 FCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1407 l~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
++|||||+++|++|||||||++||+.+...+.+.|++.. .++|||+++|+++.+..||+|++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999998764 378999999999999889999999999999999999998
Q ss_pred hc
Q 000432 1485 ER 1486 (1513)
Q Consensus 1485 ~~ 1486 (1513)
++
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 65
No 212
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-39 Score=372.74 Aligned_cols=218 Identities=26% Similarity=0.484 Sum_probs=188.3
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--CChH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE-----PTMGSIIIDNVDITK--IGLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e-----p~~G~I~IDGvdI~~--i~l~ 1333 (1513)
.|+++|++++|++ ..+|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+..
T Consensus 21 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (268)
T PRK14248 21 ILEVKDLSIYYGE--KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVV 98 (268)
T ss_pred eEEEEEEEEEeCC--ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHH
Confidence 5999999999964 359999999999999999999999999999999999865 789999999999975 3445
Q ss_pred HhhhceEEEcCCCccccCcHhhccCCC----CC----CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1334 DLRSRLGIIPQDPTLFDGTVRGNLDPL----VQ----YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~gTIR~NLdp~----~~----~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
.+|++++|+||++.+|.+|+++|+... .. ..++.+.++++.+++.+.+. ........+|||||||
T Consensus 99 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~q 171 (268)
T PRK14248 99 NLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVK-------DRLHSSALSLSGGQQQ 171 (268)
T ss_pred HHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchH-------HHHhcCcccCCHHHHH
Confidence 678899999999999999999999632 11 11345677888887754332 1223456789999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
|++|||||+++|+||+|||||++||+.+...+.+.|++..+++|||+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 172 rl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 172 RLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred HHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988667899999999998865 9999999999999999999998
Q ss_pred hcC
Q 000432 1485 ERE 1487 (1513)
Q Consensus 1485 ~~~ 1487 (1513)
+++
T Consensus 252 ~~~ 254 (268)
T PRK14248 252 TSP 254 (268)
T ss_pred hCC
Confidence 764
No 213
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-39 Score=374.22 Aligned_cols=213 Identities=26% Similarity=0.425 Sum_probs=186.6
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC-hHHhhhceE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIG-LHDLRSRLG 1340 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~-l~~LR~~is 1340 (1513)
|+++|++++|+++ +++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|++++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 80 (274)
T PRK13644 2 IRLENVSYSYPDG-TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVG 80 (274)
T ss_pred EEEEEEEEEcCCC-CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheE
Confidence 7899999999643 35999999999999999999999999999999999999999999999999998775 467889999
Q ss_pred EEcCCCc--cccCcHhhccCCCC---CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHH
Q 000432 1341 IIPQDPT--LFDGTVRGNLDPLV---QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGR 1411 (1513)
Q Consensus 1341 iVpQdp~--LF~gTIR~NLdp~~---~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LAR 1411 (1513)
++||+|. ++..|+++||.... ..+ ++++.++++..++.+.... ....||+|||||++|||
T Consensus 81 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LS~G~~qrv~lar 149 (274)
T PRK13644 81 IVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHR-----------SPKTLSGGQGQCVALAG 149 (274)
T ss_pred EEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcC-----------CcccCCHHHHHHHHHHH
Confidence 9999985 57789999997431 122 3456777888877655433 23579999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhc
Q 000432 1412 TLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1412 ALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
|++++|+||+|||||++||+.+...+.+.|++.. +++|+|+++|+++.+..||+|++|++|++++.|+++++...
T Consensus 150 al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 150 ILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999999999998764 47999999999999988999999999999999999998764
No 214
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-39 Score=363.70 Aligned_cols=208 Identities=25% Similarity=0.379 Sum_probs=182.1
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++... ...+|++++|
T Consensus 1 i~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD--FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC--EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEEE
Confidence 579999999964 3599999999999999999999999999999999999999999999999998763 3577889999
Q ss_pred EcCCCccccC-cHhhccCCC---CCC----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1342 IPQDPTLFDG-TVRGNLDPL---VQY----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1342 VpQdp~LF~g-TIR~NLdp~---~~~----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+||++.+|.+ |+++|+... ... .++++.++++..++.+...+.| .+||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLV-----------KTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhCCHHHHHHHHHHHHH
Confidence 9999999875 999999531 111 2346788889888876544332 46999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHH
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKL 1483 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eL 1483 (1513)
+.+|++|+|||||++||+++.+.+.+.|++..+ ++|+|+|+|+++.+.. ||+|++|++|++++.|+++++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999999999999999999999987653 6899999999999876 999999999999999998774
No 215
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-39 Score=374.51 Aligned_cols=215 Identities=25% Similarity=0.434 Sum_probs=189.2
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++|++++|++..+++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 59999999999764445999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEcCCCc--cccCcHhhccCCCC---CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHH
Q 000432 1341 IIPQDPT--LFDGTVRGNLDPLV---QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGR 1411 (1513)
Q Consensus 1341 iVpQdp~--LF~gTIR~NLdp~~---~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LAR 1411 (1513)
++||+|. ++..|+++|+.... ... ++++.++++..++.++... ...+||+|||||++|||
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~lar 155 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADY-----------EPNALSGGQKQRVAIAG 155 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhC-----------CcccCCHHHHHHHHHHH
Confidence 9999994 44568999985421 112 3456778888887654432 34579999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHHhc
Q 000432 1412 TLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1412 ALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
|++++|++|||||||++||+.+.+.+.+.|++..+ ++|+|+++|+++.+..||||++|++|++++.|+++++.++
T Consensus 156 al~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 156 VLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 99999999999999999999999999999988653 7899999999999988999999999999999999998765
No 216
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-39 Score=371.01 Aligned_cols=221 Identities=25% Similarity=0.437 Sum_probs=189.3
Q ss_pred CceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--CC
Q 000432 1259 VGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE-----PTMGSIIIDNVDITK--IG 1331 (1513)
Q Consensus 1259 ~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e-----p~~G~I~IDGvdI~~--i~ 1331 (1513)
.-.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 22 ~~~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 22 KVVFDTQNLNLWYGE--DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred ceEEEEeeeEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 346999999999974 359999999999999999999999999999999999987 699999999999853 45
Q ss_pred hHHhhhceEEEcCCCccccCcHhhccCCC---CCCC-----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhH
Q 000432 1332 LHDLRSRLGIIPQDPTLFDGTVRGNLDPL---VQYS-----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQ 1403 (1513)
Q Consensus 1332 l~~LR~~isiVpQdp~LF~gTIR~NLdp~---~~~s-----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQ 1403 (1513)
...+|++++|+||+|.+|..|+++|+... .+.+ ++.+.++++..++.+.+ +......+.+|||||
T Consensus 100 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l-------~~~~~~~~~~LSgGe 172 (271)
T PRK14238 100 VEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDEL-------KDRLHDNAYGLSGGQ 172 (271)
T ss_pred HHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchH-------HHHHhcCcccCCHHH
Confidence 66789999999999999999999999631 1222 22345566666554322 233345667899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhH
Q 000432 1404 RQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTK 1482 (1513)
Q Consensus 1404 RQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~e 1482 (1513)
|||++|||||+++|+||||||||++||+.+...+.+.|++..+++|+|+++|+++.+.. ||+|++|++|++++.|++++
T Consensus 173 ~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~ 252 (271)
T PRK14238 173 QQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDK 252 (271)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988778999999999999876 99999999999999999999
Q ss_pred HHhcCC
Q 000432 1483 LLERED 1488 (1513)
Q Consensus 1483 Ll~~~~ 1488 (1513)
+.+++.
T Consensus 253 ~~~~~~ 258 (271)
T PRK14238 253 IFSNPS 258 (271)
T ss_pred HHcCCC
Confidence 987643
No 217
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.5e-39 Score=368.93 Aligned_cols=218 Identities=27% Similarity=0.467 Sum_probs=189.4
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCC-----CcEEEEcCeeCCCC--ChH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPT-----MGSIIIDNVDITKI--GLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~-----~G~I~IDGvdI~~i--~l~ 1333 (1513)
.|+++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 81 (251)
T PRK14249 4 KIKIRGVNFFYHK--HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVV 81 (251)
T ss_pred eEEEEEEEEEECC--eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChH
Confidence 6899999999964 35999999999999999999999999999999999999997 69999999998753 456
Q ss_pred HhhhceEEEcCCCccccCcHhhccCCCC---C-CC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1334 DLRSRLGIIPQDPTLFDGTVRGNLDPLV---Q-YS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~gTIR~NLdp~~---~-~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
.+|++++|+||+|.+|..|+++|+.... . .. ++.+.++++..++.+.+. ......+.+|||||||
T Consensus 82 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~Gq~q 154 (251)
T PRK14249 82 NLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVK-------DNLHKSGLALSGGQQQ 154 (251)
T ss_pred HhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhh-------hHhhCCcccCCHHHHH
Confidence 7899999999999999999999996421 1 11 234566677777765443 2345567789999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
|++||||++.+|++|||||||++||..+...+.+.|++..+++|||++||+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14249 155 RLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHH
Confidence 999999999999999999999999999999999999887667999999999999987 7999999999999999999987
Q ss_pred hcC
Q 000432 1485 ERE 1487 (1513)
Q Consensus 1485 ~~~ 1487 (1513)
..+
T Consensus 235 ~~~ 237 (251)
T PRK14249 235 SRP 237 (251)
T ss_pred hCC
Confidence 653
No 218
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.8e-39 Score=371.03 Aligned_cols=220 Identities=25% Similarity=0.392 Sum_probs=190.3
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCC--CCh
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-----TMGSIIIDNVDITK--IGL 1332 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-----~~G~I~IDGvdI~~--i~l 1332 (1513)
+.|+++||+++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++| ++|+|.+||.++.. ...
T Consensus 6 ~~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (259)
T PRK14260 6 PAIKVKDLSFYYNT--SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRINI 83 (259)
T ss_pred ceEEEEEEEEEECC--eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccch
Confidence 46999999999964 3599999999999999999999999999999999999985 48999999999864 455
Q ss_pred HHhhhceEEEcCCCccccCcHhhccCCC----CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHH
Q 000432 1333 HDLRSRLGIIPQDPTLFDGTVRGNLDPL----VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQR 1404 (1513)
Q Consensus 1333 ~~LR~~isiVpQdp~LF~gTIR~NLdp~----~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQR 1404 (1513)
..+|++++++||+|.+|+.|+++|+.+. +... ++.+.++++.+++.+.+... ....+..||||||
T Consensus 84 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-------~~~~~~~LS~G~~ 156 (259)
T PRK14260 84 NRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDK-------LNKSALGLSGGQQ 156 (259)
T ss_pred HhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhH-------hcCCcccCCHHHH
Confidence 6788999999999999999999999632 1112 23466788888887654322 2345668999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEe-----CCEEeEec
Q 000432 1405 QLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLS-----DGRIAEYD 1478 (1513)
Q Consensus 1405 Qrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd-----~G~IvE~G 1478 (1513)
||+|||||++++|++|+|||||++||+.+...+.+.|++..+++|+|+|||+++.+.+ ||++++|+ +|++++.|
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~~ 236 (259)
T PRK14260 157 QRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEFG 236 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEeC
Confidence 9999999999999999999999999999999999999987777999999999999876 99999998 59999999
Q ss_pred ChhHHHhcCC
Q 000432 1479 SPTKLLERED 1488 (1513)
Q Consensus 1479 tp~eLl~~~~ 1488 (1513)
+++++.+++.
T Consensus 237 ~~~~~~~~~~ 246 (259)
T PRK14260 237 VTTQIFSNPL 246 (259)
T ss_pred CHHHHhcCCC
Confidence 9999986543
No 219
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.1e-39 Score=368.37 Aligned_cols=213 Identities=23% Similarity=0.366 Sum_probs=186.1
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHh-hhce
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDL-RSRL 1339 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~L-R~~i 1339 (1513)
-|+++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+..+. |.++
T Consensus 2 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 2 ILYLEGLSVSFDG--FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred eEEEEeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 3789999999964 359999999999999999999999999999999999999999999999999988876654 5579
Q ss_pred EEEcCCCccccC-cHhhccCCCCC------------C---CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhH
Q 000432 1340 GIIPQDPTLFDG-TVRGNLDPLVQ------------Y---SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQ 1403 (1513)
Q Consensus 1340 siVpQdp~LF~g-TIR~NLdp~~~------------~---sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQ 1403 (1513)
+++||++.+|.+ |+++|++.... . .++++.++++..++.+.. .....+|||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Ge 148 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEA-----------DRLAGLLSHGQ 148 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHH
Confidence 999999999987 99999964211 0 234566777777665432 23446799999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhH
Q 000432 1404 RQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTK 1482 (1513)
Q Consensus 1404 RQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~e 1482 (1513)
|||++||||++++|++|+|||||++||+++...+.+.|++..+++|+|+++|+++.+.+ ||+|++|++|++++.|++++
T Consensus 149 ~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~ 228 (242)
T TIGR03411 149 KQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQ 228 (242)
T ss_pred HHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHH
Confidence 99999999999999999999999999999999999999987778999999999999976 99999999999999999999
Q ss_pred HHhc
Q 000432 1483 LLER 1486 (1513)
Q Consensus 1483 Ll~~ 1486 (1513)
+..+
T Consensus 229 ~~~~ 232 (242)
T TIGR03411 229 VQAD 232 (242)
T ss_pred HhcC
Confidence 8753
No 220
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.2e-39 Score=363.14 Aligned_cols=203 Identities=27% Similarity=0.404 Sum_probs=175.4
Q ss_pred EEEEEEEEEEcCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHh---h
Q 000432 1262 ISFHNLQIRYAEHL--PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDL---R 1336 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~L---R 1336 (1513)
|+++||+++|++.. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.+++..+. |
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996432 359999999999999999999999999999999999999999999999999988876553 4
Q ss_pred -hceEEEcCCCcccc-CcHhhccCCC---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHH
Q 000432 1337 -SRLGIIPQDPTLFD-GTVRGNLDPL---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLF 1407 (1513)
Q Consensus 1337 -~~isiVpQdp~LF~-gTIR~NLdp~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl 1407 (1513)
++++|+||+|.+|. .|+++|+... ...+ ++++.++++..++.+...+ ....||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINH-----------RPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhC-----------ChhhCCHHHHHHH
Confidence 68999999999995 5999999641 1122 2356677777777554333 2357999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhhcCEEEEEeCCEEe
Q 000432 1408 CLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVIDSDLVLVLSDGRIA 1475 (1513)
Q Consensus 1408 ~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~~DrIlVLd~G~Iv 1475 (1513)
+||||++++|+||+|||||++||.++...+.+.|++.. .++|+|+|+|+++.+..||+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 99999999999999999999999999999999998764 378999999999999889999999999986
No 221
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-39 Score=380.35 Aligned_cols=228 Identities=19% Similarity=0.311 Sum_probs=189.3
Q ss_pred eEEEEEEEEEEcCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC----CCCcEEEEcCeeCCCCChHH
Q 000432 1261 TISFHNLQIRYAEHL--PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE----PTMGSIIIDNVDITKIGLHD 1334 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e----p~~G~I~IDGvdI~~i~l~~ 1334 (1513)
.++++|++++|+... ..+|+||||+|++||.+||||+||||||||+++|.|+++ |++|+|.+||.|+.+++.++
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 489999999997532 359999999999999999999999999999999999998 48999999999999998877
Q ss_pred hhh----ceEEEcCCCc--ccc-CcHhhcc----CCCCCC----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCC
Q 000432 1335 LRS----RLGIIPQDPT--LFD-GTVRGNL----DPLVQY----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENW 1399 (1513)
Q Consensus 1335 LR~----~isiVpQdp~--LF~-gTIR~NL----dp~~~~----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nL 1399 (1513)
+|+ ++++|||+|. ++. -|+.+|+ ...... .++++.++|+.+++.+.... ......+|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~--------l~~~p~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASR--------LDVYPHQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHH--------HhCCchhC
Confidence 654 6999999995 443 3565544 322111 23567889999998653211 22345679
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHh-hcCEEEEEeCCEEeE
Q 000432 1400 SVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVI-DSDLVLVLSDGRIAE 1476 (1513)
Q Consensus 1400 SgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~-~~DrIlVLd~G~IvE 1476 (1513)
|||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+. .||||+||++|+|+|
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive 234 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE 234 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999988653 789999999999985 499999999999999
Q ss_pred ecChhHHHhcCChHHHH-HHH
Q 000432 1477 YDSPTKLLEREDSFFSQ-LIK 1496 (1513)
Q Consensus 1477 ~Gtp~eLl~~~~~~f~~-l~~ 1496 (1513)
.|+++++.+++...|.+ +++
T Consensus 235 ~g~~~~~~~~p~hpyt~~ll~ 255 (326)
T PRK11022 235 TGKAHDIFRAPRHPYTQALLR 255 (326)
T ss_pred ECCHHHHhhCCCChHHHHHHH
Confidence 99999999876555554 443
No 222
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.5e-39 Score=373.68 Aligned_cols=213 Identities=26% Similarity=0.392 Sum_probs=188.7
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++||+++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.+.+..++|+.++
T Consensus 11 ~l~i~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 88 (265)
T PRK10575 11 TFALRNVSFRVPG--RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVA 88 (265)
T ss_pred eEEEeeEEEEECC--EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheE
Confidence 5999999999964 35999999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEcCCCccccC-cHhhccCCCC-----------CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHH
Q 000432 1341 IIPQDPTLFDG-TVRGNLDPLV-----------QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFC 1408 (1513)
Q Consensus 1341 iVpQdp~LF~g-TIR~NLdp~~-----------~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~ 1408 (1513)
++||++.++.+ |+++|+.... ...++++.++++.+++.+.....| .+||||||||++
T Consensus 89 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrv~ 157 (265)
T PRK10575 89 YLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----------DSLSGGERQRAW 157 (265)
T ss_pred EeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----------ccCCHHHHHHHH
Confidence 99999877665 9999996321 112456888999998866544333 369999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHh
Q 000432 1409 LGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1409 LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
||||++.+|+||||||||++||.++.+.+.+.|++.. .++|+|+|+|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 158 laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 158 IAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 9999999999999999999999999999999998764 27999999999999965 99999999999999999999875
Q ss_pred c
Q 000432 1486 R 1486 (1513)
Q Consensus 1486 ~ 1486 (1513)
.
T Consensus 238 ~ 238 (265)
T PRK10575 238 G 238 (265)
T ss_pred H
Confidence 3
No 223
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-39 Score=367.60 Aligned_cols=214 Identities=22% Similarity=0.349 Sum_probs=183.3
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCC------CCChHH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDIT------KIGLHD 1334 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~------~i~l~~ 1334 (1513)
.|+++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++. ......
T Consensus 2 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 2 SIQLNGINCFYGA--HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEEeeEEEECC--eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 3789999999964 35999999999999999999999999999999999999999999999999874 123456
Q ss_pred hhhceEEEcCCCccccC-cHhhccCCC----CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1335 LRSRLGIIPQDPTLFDG-TVRGNLDPL----VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1335 LR~~isiVpQdp~LF~g-TIR~NLdp~----~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
+|++++|+||+|.+|.+ |+++|+... ...+ .+++.++++..++.++..+. ..+|||||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LS~G~~q 148 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRF-----------PLHLSGGQQQ 148 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCC-----------hhhCCHHHHH
Confidence 78999999999999975 999999521 1122 23456667777765544433 3579999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKL 1483 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eL 1483 (1513)
|++||||++++|+||||||||++||+++...+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|++++.|+++++
T Consensus 149 rv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 149 RVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCF 228 (242)
T ss_pred HHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHh
Confidence 9999999999999999999999999999999999998765 47999999999999976 999999999999999999987
Q ss_pred HhcC
Q 000432 1484 LERE 1487 (1513)
Q Consensus 1484 l~~~ 1487 (1513)
.+.+
T Consensus 229 ~~~~ 232 (242)
T PRK11124 229 TQPQ 232 (242)
T ss_pred cCcc
Confidence 6543
No 224
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=2.2e-39 Score=330.23 Aligned_cols=210 Identities=28% Similarity=0.431 Sum_probs=186.5
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|.+++|.|+|.. .| =.++++|++||+|||+|+||||||||++++.||..|.+|+|.|+|+|....++. ++-+++
T Consensus 2 l~L~~V~~~y~~-~~---~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVSm 75 (231)
T COG3840 2 LALDDVRFSYGH-LP---MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVSM 75 (231)
T ss_pred ccccceEEeeCc-ce---EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChhh
Confidence 567899999964 34 257899999999999999999999999999999999999999999999887765 467999
Q ss_pred EcCCCccccC-cHhhccCCC----C---CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1342 IPQDPTLFDG-TVRGNLDPL----V---QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1342 VpQdp~LF~g-TIR~NLdp~----~---~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
++||.-||.- ||++|+..+ - ....+.+..|+.++|+.++.+++|+ .||||||||++|||+|
T Consensus 76 lFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARcl 144 (231)
T COG3840 76 LFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARCL 144 (231)
T ss_pred hhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHHH
Confidence 9999999965 999999643 1 2345678999999999999999985 5799999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCC
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLERED 1488 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~ 1488 (1513)
+|+.+||+||||.|+||+.-.+.+...+.+.. ++.|+++|||.++.+.. +||++++|+|||++.|+-++++..++
T Consensus 145 vR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~~ 222 (231)
T COG3840 145 VREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGKA 222 (231)
T ss_pred hccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccCC
Confidence 99999999999999999999988888776654 57799999999999876 99999999999999999999998754
No 225
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.4e-39 Score=366.61 Aligned_cols=213 Identities=28% Similarity=0.387 Sum_probs=183.8
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCC--ChHHhhhce
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKI--GLHDLRSRL 1339 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i--~l~~LR~~i 1339 (1513)
|+++|++++|++ +++|+|+||++++||++||+|++|||||||+++|.|+++|++|+|.+||.++... +...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 79 (240)
T PRK09493 2 IEFKNVSKHFGP--TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEA 79 (240)
T ss_pred EEEEeEEEEECC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhce
Confidence 689999999964 3599999999999999999999999999999999999999999999999999864 345678899
Q ss_pred EEEcCCCcccc-CcHhhccCCCC----CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHH
Q 000432 1340 GIIPQDPTLFD-GTVRGNLDPLV----QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLG 1410 (1513)
Q Consensus 1340 siVpQdp~LF~-gTIR~NLdp~~----~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LA 1410 (1513)
+++||++.+|. .|+++|+.... ..+ ++++.++++..++.+... .....||+|||||++||
T Consensus 80 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~G~~qrv~la 148 (240)
T PRK09493 80 GMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAH-----------HYPSELSGGQQQRVAIA 148 (240)
T ss_pred EEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHh-----------cChhhcCHHHHHHHHHH
Confidence 99999999886 59999996421 112 234556677666654433 23467999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcC
Q 000432 1411 RTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLERE 1487 (1513)
Q Consensus 1411 RALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~ 1487 (1513)
||++++|+||+|||||++||.++...+.+.|++.. +++|+|+|+|+++.+.. ||+|++|++|++++.|+++++++++
T Consensus 149 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~ 227 (240)
T PRK09493 149 RALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKNP 227 (240)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcCC
Confidence 99999999999999999999999999999998764 47899999999999865 9999999999999999999987653
No 226
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2.7e-39 Score=363.04 Aligned_cols=205 Identities=25% Similarity=0.416 Sum_probs=178.7
Q ss_pred EEEEEEEEEEcCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhce
Q 000432 1262 ISFHNLQIRYAEHL--PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRL 1339 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~i 1339 (1513)
|+++||+++|+... +++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.. ...++|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 78999999997532 269999999999999999999999999999999999999999999999999976 456788999
Q ss_pred EEEcCCCccccC-cHhhccCCC---CCC----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHH
Q 000432 1340 GIIPQDPTLFDG-TVRGNLDPL---VQY----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGR 1411 (1513)
Q Consensus 1340 siVpQdp~LF~g-TIR~NLdp~---~~~----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LAR 1411 (1513)
+++||+|.+|.+ |+++|+... ... .++++.++++..++.+...+ ...+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGMEELLDR-----------RVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhh-----------hhhhcCHHHHHHHHHHH
Confidence 999999999985 999999531 112 23466778888887655433 34579999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEec
Q 000432 1412 TLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1412 ALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~G 1478 (1513)
|++++|+||+|||||++||+.+.+.+.+.|++.. +++|+|+|+|+++.+.+ ||+|++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999998764 47899999999999876 9999999999998865
No 227
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.5e-40 Score=361.06 Aligned_cols=206 Identities=27% Similarity=0.411 Sum_probs=175.0
Q ss_pred EEEEeEEEEeCCC--CCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------
Q 000432 632 VEVVNGKFSWNPE--SSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------- 696 (1513)
Q Consensus 632 I~~~~~sf~~~~~--~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------- 696 (1513)
|+++++++.|... ...++|+|+||+|++|++.+|+|.||+|||||+++|.|+-.|++|+|.++|.
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7899999999752 1346899999999999999999999999999999999999999999999993
Q ss_pred ---EEEEcCCCcccC-ccHHHHHccCCCC----CchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHH
Q 000432 697 ---KAYVPQSPWILT-GNIRENILFGNQY----DSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIA 768 (1513)
Q Consensus 697 ---~ayv~Q~~~l~~-~ti~eNI~fg~~~----~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lA 768 (1513)
+|+++|++-|++ .||.|||.|..+. .++..++|.+.+.+.. |++ .-+....+|||||||||+||
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVg----L~d----k~~~yP~qLSGGQKQRVaIA 153 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVG----LSD----KADRYPAQLSGGQKQRVAIA 153 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcC----Chh----hhccCchhcCcchhhHHHHH
Confidence 599999999997 6999999997543 2344556666554431 221 12345679999999999999
Q ss_pred HHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhh--cCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000432 769 RAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGI--LKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 769 Ral~~~~~illLDep~salD~~~~~~i~~~~~~~~--~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
|||..+|+|||.|||||||||+|.+.|.+ +++.. .-|-|+++|||.++.++. ||++.||++|+++|+|+..|+..+
T Consensus 154 RALa~~P~iLL~DEaTSALDP~TT~sIL~-LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~ 232 (339)
T COG1135 154 RALANNPKILLCDEATSALDPETTQSILE-LLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFAN 232 (339)
T ss_pred HHHhcCCCEEEecCccccCChHHHHHHHH-HHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcC
Confidence 99999999999999999999999999985 45443 248899999999999987 999999999999999999998765
Q ss_pred C
Q 000432 846 N 846 (1513)
Q Consensus 846 ~ 846 (1513)
.
T Consensus 233 P 233 (339)
T COG1135 233 P 233 (339)
T ss_pred c
Confidence 4
No 228
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.9e-39 Score=371.97 Aligned_cols=219 Identities=25% Similarity=0.457 Sum_probs=190.1
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--CCh
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE-----PTMGSIIIDNVDITK--IGL 1332 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e-----p~~G~I~IDGvdI~~--i~l 1332 (1513)
..|+++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 38 ~~l~i~~l~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~~ 115 (285)
T PRK14254 38 TVIEARDLNVFYGD--EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVDP 115 (285)
T ss_pred ceEEEEEEEEEECC--EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccch
Confidence 46999999999964 359999999999999999999999999999999999997 689999999999865 345
Q ss_pred HHhhhceEEEcCCCccccCcHhhccCCC------CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHH
Q 000432 1333 HDLRSRLGIIPQDPTLFDGTVRGNLDPL------VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQL 1406 (1513)
Q Consensus 1333 ~~LR~~isiVpQdp~LF~gTIR~NLdp~------~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQr 1406 (1513)
..+|++++|+||++.+|.+|+++|+... ....+++++++++..++.+.+.. .......+||||||||
T Consensus 116 ~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LSgGe~qr 188 (285)
T PRK14254 116 VALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKD-------QLDSSGLDLSGGQQQR 188 (285)
T ss_pred HhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHH-------HHhCCcccCCHHHHHH
Confidence 6788999999999999999999999632 11124568888988888654432 2234567899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEE-EEeCCEEeEecChhHHH
Q 000432 1407 FCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVL-VLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1407 l~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIl-VLd~G~IvE~Gtp~eLl 1484 (1513)
++|||||+++|+||||||||++||.++.+.+.+.|++..+++|+|+++|+++.+.. |||++ +|++|+|++.|+++++.
T Consensus 189 v~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~~ 268 (285)
T PRK14254 189 LCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKIF 268 (285)
T ss_pred HHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHHH
Confidence 99999999999999999999999999999999999988777899999999999876 99975 57999999999999987
Q ss_pred hcC
Q 000432 1485 ERE 1487 (1513)
Q Consensus 1485 ~~~ 1487 (1513)
+++
T Consensus 269 ~~~ 271 (285)
T PRK14254 269 ENP 271 (285)
T ss_pred hCc
Confidence 654
No 229
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=4.1e-39 Score=361.46 Aligned_cols=211 Identities=23% Similarity=0.366 Sum_probs=188.4
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCh----HHhhh
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGL----HDLRS 1337 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l----~~LR~ 1337 (1513)
+.+.|+.|+|+++ .++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+.+. ...|+
T Consensus 1 ~~~~~~~~~~~~~-~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 1 VQVTNGYFSWGSG-LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred CeeeeeEEecCCC-CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 3578999999866 459999999999999999999999999999999999999999999999999876543 34577
Q ss_pred ceEEEcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCC
Q 000432 1338 RLGIIPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKS 1417 (1513)
Q Consensus 1338 ~isiVpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~ 1417 (1513)
.++|+||+|.+|+.|+++|+.....+++++..++++.+++.+.+..+|.|+++.+.....+||||||||++||||++++|
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 89999999999999999999865445677788999999999999999999999999899999999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHH--HHHHhc-CCcEEEEeccChhhHhhcCEEEEEeCCE
Q 000432 1418 SILVLDEATASVDSATDGVIQK--IISQEF-KDRTVVTIAHRIHTVIDSDLVLVLSDGR 1473 (1513)
Q Consensus 1418 ~ILiLDEaTSslD~~Te~~Iq~--~i~~~~-~~~TvI~IAHRl~ti~~~DrIlVLd~G~ 1473 (1513)
+||||||||++||..+...+.+ .++... .+.|+|+++|+.+.+..||+|++|++|.
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 9999999999999999887776 444332 3689999999999999999999999984
No 230
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-39 Score=354.91 Aligned_cols=189 Identities=34% Similarity=0.456 Sum_probs=158.8
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------EEEEcC
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT--------KAYVPQ 702 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~--------~ayv~Q 702 (1513)
.+++++++.+|+. ..+|+|+||+|++||+++|+|||||||||||++|.|+.+|++|+|.++|. ++||+|
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p~~~~~~vFQ 79 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGPGPDIGYVFQ 79 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCCCCCEEEEec
Confidence 4789999999974 57999999999999999999999999999999999999999999999884 599999
Q ss_pred CCcccC-ccHHHHHccCCCCC-------chHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcC
Q 000432 703 SPWILT-GNIRENILFGNQYD-------SCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQD 774 (1513)
Q Consensus 703 ~~~l~~-~ti~eNI~fg~~~~-------~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~ 774 (1513)
++-|+. -||+|||.||.+.. +++.++.++..+|...-+..| ..||||||||||||||+..+
T Consensus 80 ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiARAL~~~ 148 (248)
T COG1116 80 EDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIARALATR 148 (248)
T ss_pred cCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHHHHhcC
Confidence 988875 59999999997642 123445555555554444444 58999999999999999999
Q ss_pred CCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCc-cccCCEEEEEeC--CeE
Q 000432 775 ADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEF-LPAADIILVMEN--GRI 833 (1513)
Q Consensus 775 ~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~-l~~~d~i~vl~~--G~i 833 (1513)
|+|+||||||+|||+.|..++-+.+.+-+. .++|+++|||+++. +--+|+|++|.+ |+|
T Consensus 149 P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 149 PKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred CCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 999999999999999998777554443332 37999999999987 456999999998 444
No 231
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-39 Score=370.17 Aligned_cols=222 Identities=23% Similarity=0.400 Sum_probs=193.5
Q ss_pred CCCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCC---
Q 000432 1257 PDVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-----TMGSIIIDNVDIT--- 1328 (1513)
Q Consensus 1257 p~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-----~~G~I~IDGvdI~--- 1328 (1513)
|..+.|+++|++++|+.. ++|+|+||+|++||++||+|++|||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 12 ~~~~~l~~~~l~~~~~~~--~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~~ 89 (265)
T PRK14252 12 PTQQKSEVNKLNFYYGGY--QALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNILS 89 (265)
T ss_pred CCCceEEEEEEEEEECCe--eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCccccccc
Confidence 567889999999999743 599999999999999999999999999999999999975 7999999998874
Q ss_pred -CCChHHhhhceEEEcCCCccccCcHhhccCCCC--------CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCC
Q 000432 1329 -KIGLHDLRSRLGIIPQDPTLFDGTVRGNLDPLV--------QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENW 1399 (1513)
Q Consensus 1329 -~i~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~--------~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nL 1399 (1513)
....+.+|++++|+||+|.+|.+|+++|+.... +..++++.++++.+++.+.+. ........+|
T Consensus 90 ~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~L 162 (265)
T PRK14252 90 PEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVK-------DRLGDLAFNL 162 (265)
T ss_pred cccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhh-------HHHhCCcccC
Confidence 334567899999999999999999999996421 122467788888888765332 2344556789
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEec
Q 000432 1400 SVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1400 SgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~G 1478 (1513)
|+|||||++||||++++|+||+|||||++||.++.+.+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|
T Consensus 163 S~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~g 242 (265)
T PRK14252 163 SGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEFG 242 (265)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999987777899999999999975 9999999999999999
Q ss_pred ChhHHHhcC
Q 000432 1479 SPTKLLERE 1487 (1513)
Q Consensus 1479 tp~eLl~~~ 1487 (1513)
+++++..++
T Consensus 243 ~~~~~~~~~ 251 (265)
T PRK14252 243 ATDTIFIKP 251 (265)
T ss_pred CHHHHHhCC
Confidence 999997654
No 232
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.2e-39 Score=366.77 Aligned_cols=218 Identities=26% Similarity=0.418 Sum_probs=189.7
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCCC--ChH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-----TMGSIIIDNVDITKI--GLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-----~~G~I~IDGvdI~~i--~l~ 1333 (1513)
.|+++|++++|+. .++|+|+||+|++||.+||+|++|||||||+++|.|+++| ++|+|.+||.++... +..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 81 (251)
T PRK14270 4 KMESKNLNLWYGE--KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVV 81 (251)
T ss_pred EEEEEEeEEEECC--eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHH
Confidence 6899999999964 3599999999999999999999999999999999999985 799999999999753 345
Q ss_pred HhhhceEEEcCCCccccCcHhhccCCCC---CC-C----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1334 DLRSRLGIIPQDPTLFDGTVRGNLDPLV---QY-S----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~gTIR~NLdp~~---~~-s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
.+|++++|+||++.+|..|+++|+.... .. + ++++.++++.+++.+.+.. ........||+||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~q 154 (251)
T PRK14270 82 ELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKD-------DLKKSALKLSGGQQQ 154 (251)
T ss_pred HHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhh-------HhhCCcccCCHHHHH
Confidence 6789999999999999999999997421 11 1 2456778888888654432 223456789999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
|++||||++++|+||+|||||++||+.+...+.+.|++..++.|+|+|+|+++.+.. ||||++|++|++++.|+++++.
T Consensus 155 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 155 RLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHHh
Confidence 999999999999999999999999999999999999987777999999999999876 9999999999999999999997
Q ss_pred hcC
Q 000432 1485 ERE 1487 (1513)
Q Consensus 1485 ~~~ 1487 (1513)
..+
T Consensus 235 ~~~ 237 (251)
T PRK14270 235 LEP 237 (251)
T ss_pred cCC
Confidence 653
No 233
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=3e-39 Score=366.13 Aligned_cols=212 Identities=27% Similarity=0.451 Sum_probs=181.8
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHh-hhceE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDL-RSRLG 1340 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~L-R~~is 1340 (1513)
|+++||+++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+.... |++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (232)
T cd03218 1 LRAENLSKRYGK--RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIG 78 (232)
T ss_pred CeEEEEEEEeCC--EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEE
Confidence 578999999964 359999999999999999999999999999999999999999999999999988876664 57899
Q ss_pred EEcCCCccccC-cHhhccCCC---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHH
Q 000432 1341 IIPQDPTLFDG-TVRGNLDPL---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRT 1412 (1513)
Q Consensus 1341 iVpQdp~LF~g-TIR~NLdp~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARA 1412 (1513)
++||++.+|.+ |+++|+... .... ++++.++++..++.+ .......+||||||||++||||
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~la~a 147 (232)
T cd03218 79 YLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKLEELLEEFHITH-----------LRKSKASSLSGGERRRVEIARA 147 (232)
T ss_pred EecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChh-----------hhhCChhhCCHHHHHHHHHHHH
Confidence 99999999987 999999632 1122 223445566655543 2334456899999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1413 LLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1413 LLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
++++|++|+|||||++||.++.+.+.+.|++.. +++|+|+++|+++.+.. ||+|++|++|++++.|+++++...
T Consensus 148 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 223 (232)
T cd03218 148 LATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAAN 223 (232)
T ss_pred HhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhcC
Confidence 999999999999999999999999999998764 47899999999987766 999999999999999999998653
No 234
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-39 Score=375.73 Aligned_cols=217 Identities=27% Similarity=0.408 Sum_probs=195.2
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhce
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRL 1339 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~i 1339 (1513)
..|+++||+.+|+ ...+++|+|++|++||.+.++|||||||||++++|.||..|++|+|.+||.||..++++ ++.|
T Consensus 4 ~~l~i~~v~k~yg--~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 4 PALEIRNVSKSFG--DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred ceEEEEeeeeecC--CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 4699999999998 34699999999999999999999999999999999999999999999999999998887 4789
Q ss_pred EEEcCCCcccc-CcHhhccCCCCC----CCH----HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHH
Q 000432 1340 GIIPQDPTLFD-GTVRGNLDPLVQ----YSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLG 1410 (1513)
Q Consensus 1340 siVpQdp~LF~-gTIR~NLdp~~~----~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LA 1410 (1513)
++|+|+..||. -||++|+.+.-. ..+ +.+.++|+.+++.++-.+.|. .|||||+||++||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p~-----------qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKPH-----------QLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhChh-----------hhChHHHHHHHHH
Confidence 99999999995 599999975421 232 368899999999998887774 5799999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcC
Q 000432 1411 RTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLERE 1487 (1513)
Q Consensus 1411 RALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~ 1487 (1513)
|||..+|++|+||||-|+||.+-...+|.-+++.. .+.|.|.|||+-+.... +|||.||++|+|...|+|+|+..++
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 99999999999999999999999999998887654 38899999999887554 9999999999999999999999998
Q ss_pred ChHH
Q 000432 1488 DSFF 1491 (1513)
Q Consensus 1488 ~~~f 1491 (1513)
...|
T Consensus 229 ~~~f 232 (352)
T COG3842 229 ATRF 232 (352)
T ss_pred chHH
Confidence 7665
No 235
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-39 Score=367.93 Aligned_cols=224 Identities=25% Similarity=0.428 Sum_probs=192.1
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCCC--ChH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-----TMGSIIIDNVDITKI--GLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-----~~G~I~IDGvdI~~i--~l~ 1333 (1513)
.|+++|++++|++ ..+|+|+||+|++||.+||+|++|||||||+++|.|+.+| ++|+|.+||.++... +..
T Consensus 6 ~i~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 83 (253)
T PRK14261 6 ILSTKNLNLWYGE--KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVV 83 (253)
T ss_pred eEEEeeeEEEECC--eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchh
Confidence 5899999999964 3599999999999999999999999999999999999763 489999999999876 456
Q ss_pred HhhhceEEEcCCCccccCcHhhccCCCC---C-C----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1334 DLRSRLGIIPQDPTLFDGTVRGNLDPLV---Q-Y----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~gTIR~NLdp~~---~-~----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
..|++++|+||+|.+|++|+++|+.... . . .++++.++++.+++.+.+. +.....+.+||+||||
T Consensus 84 ~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~q 156 (253)
T PRK14261 84 ALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVK-------DRLHDSALSLSGGQQQ 156 (253)
T ss_pred hhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhH-------HHhhcChhhCCHHHHH
Confidence 7889999999999999999999997421 1 1 1335667777777754432 2345566789999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
|++||||++.+|++++|||||++||.++.+.+.+.|++..+++|+|+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 rv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 236 (253)
T PRK14261 157 RLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIF 236 (253)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHH
Confidence 999999999999999999999999999999999999988777999999999999975 9999999999999999999998
Q ss_pred hcCChHHHH
Q 000432 1485 EREDSFFSQ 1493 (1513)
Q Consensus 1485 ~~~~~~f~~ 1493 (1513)
+++...+.+
T Consensus 237 ~~~~~~~~~ 245 (253)
T PRK14261 237 ENPHEELTE 245 (253)
T ss_pred hCCCcHHHH
Confidence 764433333
No 236
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-39 Score=369.12 Aligned_cols=219 Identities=21% Similarity=0.429 Sum_probs=190.0
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCC--CChH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE-----PTMGSIIIDNVDITK--IGLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e-----p~~G~I~IDGvdI~~--i~l~ 1333 (1513)
.|+++||+++|++. ++|+|+||+|++||++||+|++|||||||+++|.|++. |++|+|.+||.++.. .+..
T Consensus 10 ~l~i~~v~~~~~~~--~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 87 (264)
T PRK14243 10 VLRTENLNVYYGSF--LAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPV 87 (264)
T ss_pred EEEEeeeEEEECCE--EEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChH
Confidence 59999999999643 59999999999999999999999999999999999986 479999999999853 4566
Q ss_pred HhhhceEEEcCCCccccCcHhhccCCCC---CC---CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHH
Q 000432 1334 DLRSRLGIIPQDPTLFDGTVRGNLDPLV---QY---SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLF 1407 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~gTIR~NLdp~~---~~---sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl 1407 (1513)
.+|++++++||++.+|+.|+++|+.... .. .++++.++++.+++.+.+.. .....+.+||||||||+
T Consensus 88 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qrv 160 (264)
T PRK14243 88 EVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKD-------KLKQSGLSLSGGQQQRL 160 (264)
T ss_pred HHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHH-------HhcCCcccCCHHHHHHH
Confidence 7899999999999999899999996421 11 23456677888888665532 23445678999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEe---------CCEEeEe
Q 000432 1408 CLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLS---------DGRIAEY 1477 (1513)
Q Consensus 1408 ~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd---------~G~IvE~ 1477 (1513)
+||||++++|+||||||||++||+++...+.+.|++..+++|||+++|+++.+.. ||||++|+ +|+|++.
T Consensus 161 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~ 240 (264)
T PRK14243 161 CIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEF 240 (264)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEe
Confidence 9999999999999999999999999999999999988777899999999999866 89999998 8999999
Q ss_pred cChhHHHhcCC
Q 000432 1478 DSPTKLLERED 1488 (1513)
Q Consensus 1478 Gtp~eLl~~~~ 1488 (1513)
|+++++.+++.
T Consensus 241 ~~~~~~~~~~~ 251 (264)
T PRK14243 241 DRTEKIFNSPQ 251 (264)
T ss_pred CCHHHHHhCCC
Confidence 99999987643
No 237
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2e-39 Score=362.16 Aligned_cols=200 Identities=31% Similarity=0.497 Sum_probs=174.1
Q ss_pred EEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEE
Q 000432 1263 SFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGII 1342 (1513)
Q Consensus 1263 ~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiV 1342 (1513)
+++|++++|+.+..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+|++++|+
T Consensus 1 ~~~~l~~~~~~~~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~ 80 (211)
T cd03225 1 ELKNLSFSYPDGARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLV 80 (211)
T ss_pred CceeEEEecCCCCeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEE
Confidence 47899999975324599999999999999999999999999999999999999999999999999988888899999999
Q ss_pred cCCC--ccccCcHhhccCCC---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1343 PQDP--TLFDGTVRGNLDPL---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1343 pQdp--~LF~gTIR~NLdp~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
||+| .+++.|+++|+... ...+ ++++.++++..++.+...+ ...+||||||||++|||||
T Consensus 81 ~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~laral 149 (211)
T cd03225 81 FQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDR-----------SPFTLSGGQKQRVAIAGVL 149 (211)
T ss_pred ecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcC-----------CcccCCHHHHHHHHHHHHH
Confidence 9998 36788999999642 1122 2356667777777654432 3367999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCE
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGR 1473 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~ 1473 (1513)
+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|+|+++.+.. ||+|++|++|+
T Consensus 150 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 150 AMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999999999999999999998765 37899999999999988 99999999985
No 238
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=2.7e-39 Score=362.00 Aligned_cols=201 Identities=28% Similarity=0.389 Sum_probs=175.2
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCh---HHhhhc
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGL---HDLRSR 1338 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l---~~LR~~ 1338 (1513)
|+++|++++|+.+ +++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|++
T Consensus 1 l~~~~l~~~~~~~-~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 79 (214)
T cd03292 1 IEFINVTKTYPNG-TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRRK 79 (214)
T ss_pred CEEEEEEEEeCCC-ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHHh
Confidence 5789999999644 359999999999999999999999999999999999999999999999999987764 347889
Q ss_pred eEEEcCCCccccC-cHhhccCCC---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHH
Q 000432 1339 LGIIPQDPTLFDG-TVRGNLDPL---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLG 1410 (1513)
Q Consensus 1339 isiVpQdp~LF~g-TIR~NLdp~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LA 1410 (1513)
++++||+|.+|.+ |+++|+... ...+ ++++.++++.+++.+...+.| .+||||||||++||
T Consensus 80 i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~la 148 (214)
T cd03292 80 IGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALP-----------AELSGGEQQRVAIA 148 (214)
T ss_pred eEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----------hhcCHHHHHHHHHH
Confidence 9999999999985 999999642 1122 345778888888866544332 47999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEE
Q 000432 1411 RTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRI 1474 (1513)
Q Consensus 1411 RALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~I 1474 (1513)
||++++|+|++|||||++||+++.+.+.+.|++.. +++|+|+|+|+++.+.+ ||+|++|++|++
T Consensus 149 ral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 149 RAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999998863 57999999999999986 899999999975
No 239
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=7.2e-39 Score=364.21 Aligned_cols=220 Identities=30% Similarity=0.463 Sum_probs=192.4
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------EE
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------KA 698 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~a 698 (1513)
|+++|+++.|+.. .+++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|. ++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 4689999999642 357999999999999999999999999999999999999999999999883 69
Q ss_pred EEcCCCcccCccHHHHHccCCC-CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000432 699 YVPQSPWILTGNIRENILFGNQ-YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDADI 777 (1513)
Q Consensus 699 yv~Q~~~l~~~ti~eNI~fg~~-~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~i 777 (1513)
|++|++++++.|++||+.++.+ ...++..+.++...+.+.++.+|.|.++..+.++.+|||||||||+||||++.+|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 9999999999999999998654 233334445555666777788899999989999999999999999999999999999
Q ss_pred EEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHHHHH
Q 000432 778 YLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQNIGFEVLV 853 (1513)
Q Consensus 778 llLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~l~ 853 (1513)
+||||||++||+++.+.+.+ .+..+.+++|+|++||+++.+..||+|++|++|++++.|+.+++.+..+.|..++
T Consensus 160 lllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~~~ 234 (237)
T cd03252 160 LIFDEATSALDYESEHAIMR-NMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAENGLYAYLY 234 (237)
T ss_pred EEEeCCcccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhccChHHHHH
Confidence 99999999999999877764 5666656899999999999988899999999999999999999988777666554
No 240
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-39 Score=363.57 Aligned_cols=203 Identities=28% Similarity=0.359 Sum_probs=176.7
Q ss_pred EEEEEEEEEEcCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhce
Q 000432 1262 ISFHNLQIRYAEHL--PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRL 1339 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~i 1339 (1513)
|+++|++++|++.. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 57899999997521 369999999999999999999999999999999999999999999999999863 47889
Q ss_pred EEEcCCCcccc-CcHhhccCCCC---CC----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHH
Q 000432 1340 GIIPQDPTLFD-GTVRGNLDPLV---QY----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGR 1411 (1513)
Q Consensus 1340 siVpQdp~LF~-gTIR~NLdp~~---~~----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LAR 1411 (1513)
+++||+|.+|. .|+++|+.... .. .++++.++++..++.+...+.| .+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGFENAYP-----------HQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCc-----------ccCCHHHHHHHHHHH
Confidence 99999999987 69999996321 11 2356788888888876554433 479999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEe--CCEEeEecCh
Q 000432 1412 TLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLS--DGRIAEYDSP 1480 (1513)
Q Consensus 1412 ALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd--~G~IvE~Gtp 1480 (1513)
||+++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|+|+++.+.+ ||+|++|+ +|+++|.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999998764 37899999999998865 99999999 7999998764
No 241
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.7e-39 Score=361.66 Aligned_cols=202 Identities=23% Similarity=0.384 Sum_probs=175.8
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|+.. ++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+.. |+++++
T Consensus 1 i~~~~l~~~~~~~--~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~ 76 (213)
T cd03301 1 VELENVTKRFGNV--TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAM 76 (213)
T ss_pred CEEEeeEEEECCe--eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEE
Confidence 5789999999653 599999999999999999999999999999999999999999999999999876543 578999
Q ss_pred EcCCCcccc-CcHhhccCCC---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1342 IPQDPTLFD-GTVRGNLDPL---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1342 VpQdp~LF~-gTIR~NLdp~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+||++.+|. .|+++|+... ...+ ++++.++++..++.+..... ..+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qr~~laral 145 (213)
T cd03301 77 VFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRK-----------PKQLSGGQRQRVALGRAI 145 (213)
T ss_pred EecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCC-----------hhhCCHHHHHHHHHHHHH
Confidence 999999985 5999999642 1122 23566778888876654433 357999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEec
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~G 1478 (1513)
+++|+||+|||||++||+++.+.+.+.|++.. .++|+|+|+|+++.+.+ ||+|++|++|+++++|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 146 VREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999998864 37899999999999877 9999999999999986
No 242
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4.4e-39 Score=357.39 Aligned_cols=201 Identities=57% Similarity=1.022 Sum_probs=183.2
Q ss_pred EEEEeEEEEeCCCCC--CCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCeEEEEcCCCcccCc
Q 000432 632 VEVVNGKFSWNPESS--SPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGTKAYVPQSPWILTG 709 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~--~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~~ayv~Q~~~l~~~ 709 (1513)
++++|++++|++... +++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.++|++|+|++++.
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g~i~~~~q~~~l~~~ 80 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPGSIAYVSQEPWIQNG 80 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcCEEEEEecCchhccC
Confidence 468999999964311 379999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCH
Q 000432 710 NIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDA 789 (1513)
Q Consensus 710 ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~illLDep~salD~ 789 (1513)
|++||+.++..+++++..++.+.+++.+.++.+|.|++|.+++++.+||||||||++||||++++|+++||||||++||+
T Consensus 81 t~~enl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD~ 160 (204)
T cd03250 81 TIRENILFGKPFDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVDA 160 (204)
T ss_pred cHHHHhccCCCcCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCH
Confidence 99999999877666667778888899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhc-CCcEEEEEccCCCccccCCEEEEEeCCe
Q 000432 790 HTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPAADIILVMENGR 832 (1513)
Q Consensus 790 ~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~~d~i~vl~~G~ 832 (1513)
+..+.+++.++.... +++|+|++||+++.+..||++++|++|+
T Consensus 161 ~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 161 HVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 998888776665443 4789999999999988899999999985
No 243
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=4.6e-39 Score=358.42 Aligned_cols=202 Identities=25% Similarity=0.409 Sum_probs=179.4
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|+. .++|+|+||++++||.++|+|++|||||||+++|.|+.+|++|+|.+||.++.+. .++|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~ 76 (208)
T cd03268 1 LKTNDLTKTYGK--KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGA 76 (208)
T ss_pred CEEEEEEEEECC--eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEE
Confidence 578999999954 3699999999999999999999999999999999999999999999999998765 567889999
Q ss_pred EcCCCccc-cCcHhhccCCC---CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCC
Q 000432 1342 IPQDPTLF-DGTVRGNLDPL---VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKS 1417 (1513)
Q Consensus 1342 VpQdp~LF-~gTIR~NLdp~---~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~ 1417 (1513)
+||++.+| +.|+++|+... ...+++++.++++..++.+...+. ...||||||||++||||++++|
T Consensus 77 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~la~al~~~p 145 (208)
T cd03268 77 LIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAKKK-----------VKGFSLGMKQRLGIALALLGNP 145 (208)
T ss_pred ecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhhh-----------HhhCCHHHHHHHHHHHHHhcCC
Confidence 99999888 57999999642 123567888999999987665432 3469999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEec
Q 000432 1418 SILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1418 ~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~G 1478 (1513)
++|+|||||++||+++.+.+.+.|++.. .++|+|+++|+++.+.. ||+|++|++|++++.|
T Consensus 146 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 146 DLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999998764 47899999999999876 9999999999999865
No 244
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-39 Score=386.51 Aligned_cols=209 Identities=26% Similarity=0.418 Sum_probs=181.9
Q ss_pred cceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHh----hhceEEEcCCCcccc-C
Q 000432 1277 SVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDL----RSRLGIIPQDPTLFD-G 1351 (1513)
Q Consensus 1277 ~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~L----R~~isiVpQdp~LF~-g 1351 (1513)
.+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|.+||.|+.+.+..++ |++++||||++.+|. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999998887654 358999999999996 4
Q ss_pred cHhhccCCC---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000432 1352 TVRGNLDPL---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDE 1424 (1513)
Q Consensus 1352 TIR~NLdp~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDE 1424 (1513)
|+++|+... ...+ ++++.++++.+++.++..+.| .+||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~-----------~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP-----------DELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc-----------ccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 999999642 1122 356778899999987665554 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCCh-HHHHHHH
Q 000432 1425 ATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLEREDS-FFSQLIK 1496 (1513)
Q Consensus 1425 aTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~~-~f~~l~~ 1496 (1513)
||++||+.+.+.+++.|++.. .++|+|+|+|+++.+.. ||+|++|++|++++.|+|+++++++.. +.+.++.
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~v~~~~~ 266 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFR 266 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHHHHHHHh
Confidence 999999999999999998764 47899999999999865 999999999999999999999886543 3344443
No 245
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.3e-39 Score=369.89 Aligned_cols=212 Identities=25% Similarity=0.437 Sum_probs=187.9
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++..++..++|+.++|
T Consensus 3 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (255)
T PRK11231 3 LRTENLTVGYGT--KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLAL 80 (255)
T ss_pred EEEEeEEEEECC--EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEE
Confidence 789999999964 359999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EcCCCccccC-cHhhccCCCC--------C---CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHH
Q 000432 1342 IPQDPTLFDG-TVRGNLDPLV--------Q---YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCL 1409 (1513)
Q Consensus 1342 VpQdp~LF~g-TIR~NLdp~~--------~---~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~L 1409 (1513)
+||++.+|.+ |+++|+++.. . ..++++.++++.+++.+...+ ....||||||||++|
T Consensus 81 ~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~l 149 (255)
T PRK11231 81 LPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADR-----------RLTDLSGGQRQRAFL 149 (255)
T ss_pred ecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcC-----------CcccCCHHHHHHHHH
Confidence 9999999877 9999997421 1 123457778888887654332 345799999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1410 GRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1410 ARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
|||++++|++|||||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.. ||+|++|++|++++.|+++++...
T Consensus 150 aral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 228 (255)
T PRK11231 150 AMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMTP 228 (255)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcCH
Confidence 999999999999999999999999999999998764 47899999999999875 999999999999999999998753
No 246
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.4e-39 Score=349.79 Aligned_cols=221 Identities=26% Similarity=0.390 Sum_probs=184.6
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.+++++|+.+|.. ..||+||||+|++||.|+||||||||||||++++.|+..|++|+|.+||.++... ...++
T Consensus 3 ~l~i~~v~~~f~~--~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~ 75 (248)
T COG1116 3 LLEIEGVSKSFGG--VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIG 75 (248)
T ss_pred eEEEEeeEEEeCc--eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEE
Confidence 5899999999986 4699999999999999999999999999999999999999999999999988443 45799
Q ss_pred EEcCCCcccc-CcHhhccCCCCCC-------CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHH
Q 000432 1341 IIPQDPTLFD-GTVRGNLDPLVQY-------SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRT 1412 (1513)
Q Consensus 1341 iVpQdp~LF~-gTIR~NLdp~~~~-------sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARA 1412 (1513)
||+|++.||. -||++|+...-+. ..+.+.++|+.+||.+|-.+.|. .||||||||++||||
T Consensus 76 ~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P~-----------qLSGGMrQRVaiARA 144 (248)
T COG1116 76 YVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYPH-----------QLSGGMRQRVAIARA 144 (248)
T ss_pred EEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCcc-----------ccChHHHHHHHHHHH
Confidence 9999999998 5999999643111 24568899999999999888774 579999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeC--CEEe---EecChhHHH
Q 000432 1413 LLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSD--GRIA---EYDSPTKLL 1484 (1513)
Q Consensus 1413 LLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~--G~Iv---E~Gtp~eLl 1484 (1513)
|+.+|+||+||||.+|||+.|...+|+-+.+.. .++||++|||+++.... +|||+||.+ |+|. +.+=|..-
T Consensus 145 L~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~~~~~i~l~rpR- 223 (248)
T COG1116 145 LATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIGEELEIDLPRPR- 223 (248)
T ss_pred HhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcceeeEEecCCCCCc-
Confidence 999999999999999999999999999887765 35899999999998655 999999999 5553 33322111
Q ss_pred hcCChHHHHHHHHHhh
Q 000432 1485 EREDSFFSQLIKEYSM 1500 (1513)
Q Consensus 1485 ~~~~~~f~~l~~~~~~ 1500 (1513)
...+..|.++.++-+.
T Consensus 224 ~~~~~~f~~l~~~i~~ 239 (248)
T COG1116 224 IRGDPEFLELREELLE 239 (248)
T ss_pred cccChHHHHHHHHHHH
Confidence 2234566666655443
No 247
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.9e-39 Score=377.31 Aligned_cols=213 Identities=26% Similarity=0.404 Sum_probs=186.7
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhce
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRL 1339 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~i 1339 (1513)
..|+++||+++|++ ..+|+||||+|++||++||+||+|||||||+++|+|+++|++|+|.++|.|+...+ ...|+++
T Consensus 6 ~~i~i~~l~k~~~~--~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD--KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC--eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 46999999999964 35999999999999999999999999999999999999999999999999998755 4578999
Q ss_pred EEEcCCCcccc-CcHhhccCCCC---CCCH----HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHH
Q 000432 1340 GIIPQDPTLFD-GTVRGNLDPLV---QYSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGR 1411 (1513)
Q Consensus 1340 siVpQdp~LF~-gTIR~NLdp~~---~~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LAR 1411 (1513)
+|+||+|.+|. .|++||+..+. ..++ +++.++++.+++.+. .++.+ .+||+|||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENK-------ADAKV----GELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchH-------hcCch----hhCCHHHHHHHHHHH
Confidence 99999999986 69999997422 1232 345567777776543 44554 369999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1412 TLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1412 ALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
||+.+|++|+|||||++||+.+...+.+.|++.. +++|||+++|.++.+.. ||||++|++|++++.|+++++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999999999999875 47899999999999976 999999999999999999999765
No 248
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-39 Score=364.96 Aligned_cols=211 Identities=27% Similarity=0.369 Sum_probs=187.1
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|+.. .+++|+||+|++||++||+|++|||||||+++|+|+++|.+|+|.+||.++.+.+. .|+.+++
T Consensus 1 l~~~~l~~~~~~~--~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 76 (232)
T cd03300 1 IELENVSKFYGGF--VALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVNT 76 (232)
T ss_pred CEEEeEEEEeCCe--eeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceEE
Confidence 5799999999753 59999999999999999999999999999999999999999999999999987664 3688999
Q ss_pred EcCCCccccC-cHhhccCCC-------CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1342 IPQDPTLFDG-TVRGNLDPL-------VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1342 VpQdp~LF~g-TIR~NLdp~-------~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+||+|.+|.+ |+++|+... ....++++.++++..++.++....| .+||+|||||++||||+
T Consensus 77 ~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrl~laral 145 (232)
T cd03300 77 VFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP-----------SQLSGGQQQRVAIARAL 145 (232)
T ss_pred EecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHH
Confidence 9999999976 999999631 1122456788888888877765554 47999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcC
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLERE 1487 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~ 1487 (1513)
+++|++|+|||||+++|..+.+.+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++.+.+
T Consensus 146 ~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~~ 222 (232)
T cd03300 146 VNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEEP 222 (232)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhCC
Confidence 999999999999999999999999999987653 7999999999999876 8999999999999999999988754
No 249
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.7e-39 Score=362.00 Aligned_cols=200 Identities=26% Similarity=0.400 Sum_probs=176.1
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChH---Hhhhc
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLH---DLRSR 1338 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~---~LR~~ 1338 (1513)
|+++|++++|+.+ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.|+.+++.. .+|++
T Consensus 2 l~~~~l~~~~~~~-~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 80 (214)
T TIGR02673 2 IEFHNVSKAYPGG-VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRRR 80 (214)
T ss_pred EEEEeeeEEeCCC-ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhh
Confidence 7899999999533 3599999999999999999999999999999999999999999999999999887643 46889
Q ss_pred eEEEcCCCcccc-CcHhhccCCC----C---CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHH
Q 000432 1339 LGIIPQDPTLFD-GTVRGNLDPL----V---QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLG 1410 (1513)
Q Consensus 1339 isiVpQdp~LF~-gTIR~NLdp~----~---~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LA 1410 (1513)
++|+||+|.+|. .|+++|+... + +..+++++++++..++.+...+.| .+||||||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~la 149 (214)
T TIGR02673 81 IGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----------EQLSGGEQQRVAIA 149 (214)
T ss_pred eEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----------hhCCHHHHHHHHHH
Confidence 999999999986 6999999642 1 112457888999998876654433 47999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCE
Q 000432 1411 RTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGR 1473 (1513)
Q Consensus 1411 RALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~ 1473 (1513)
|||+++|++|||||||++||+++...+.+.|++.. +++|+|+|+|+++.+.+ ||+|++|++|+
T Consensus 150 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 150 RAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 99999999999999999999999999999998864 47999999999999987 89999999985
No 250
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-38 Score=367.12 Aligned_cols=219 Identities=21% Similarity=0.339 Sum_probs=192.1
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCCC--ChH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-----TMGSIIIDNVDITKI--GLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-----~~G~I~IDGvdI~~i--~l~ 1333 (1513)
.+.+++.+++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++| ++|+|.+||.|+... ...
T Consensus 8 ~~~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 85 (261)
T PRK14263 8 VMDCKLDKIFYGN--FMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPV 85 (261)
T ss_pred eEEEEeEEEEeCC--EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchH
Confidence 4889999999964 3599999999999999999999999999999999999987 799999999998753 445
Q ss_pred HhhhceEEEcCCCccccCcHhhccCCCCC------CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHH
Q 000432 1334 DLRSRLGIIPQDPTLFDGTVRGNLDPLVQ------YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLF 1407 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~gTIR~NLdp~~~------~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl 1407 (1513)
.+|++++|+||+|.+|..|+++|+..... ..++++.++++.+++.+.+.. ...+...+||+|||||+
T Consensus 86 ~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~qrv 158 (261)
T PRK14263 86 VVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQRL 158 (261)
T ss_pred hhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHHHH
Confidence 67889999999999999999999974311 123578889999998765543 23456678999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEe--------CCEEeEec
Q 000432 1408 CLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLS--------DGRIAEYD 1478 (1513)
Q Consensus 1408 ~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd--------~G~IvE~G 1478 (1513)
+||||++++|+||+|||||++||+.+...+.+.|++..+++|+|+|+|+++.+.+ ||||++|+ +|++++.|
T Consensus 159 ~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~g 238 (261)
T PRK14263 159 CIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEMG 238 (261)
T ss_pred HHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEeC
Confidence 9999999999999999999999999999999999988778899999999999876 99999996 89999999
Q ss_pred ChhHHHhcCC
Q 000432 1479 SPTKLLERED 1488 (1513)
Q Consensus 1479 tp~eLl~~~~ 1488 (1513)
+++++++++.
T Consensus 239 ~~~~~~~~~~ 248 (261)
T PRK14263 239 PTAQIFQNPR 248 (261)
T ss_pred CHHHHHhCCC
Confidence 9999987644
No 251
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-38 Score=369.08 Aligned_cols=218 Identities=28% Similarity=0.439 Sum_probs=189.0
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCCCC-hHH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-----TMGSIIIDNVDITKIG-LHD 1334 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-----~~G~I~IDGvdI~~i~-l~~ 1334 (1513)
.++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ...
T Consensus 21 ~l~i~nl~~~~~~--~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~ 98 (276)
T PRK14271 21 AMAAVNLTLGFAG--KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLE 98 (276)
T ss_pred EEEEeeEEEEECC--EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHH
Confidence 6899999999974 3599999999999999999999999999999999999986 6999999999998763 456
Q ss_pred hhhceEEEcCCCccccCcHhhccCCC----CCCCHHHH----HHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHH
Q 000432 1335 LRSRLGIIPQDPTLFDGTVRGNLDPL----VQYSDKQV----WEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQL 1406 (1513)
Q Consensus 1335 LR~~isiVpQdp~LF~gTIR~NLdp~----~~~sdeei----~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQr 1406 (1513)
+|++++|+||+|.+|..|+++|+... ...+++++ .++++.+++.+.. ++.......+||||||||
T Consensus 99 ~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~l~~~~~~LSgGq~qr 171 (276)
T PRK14271 99 FRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAV-------KDRLSDSPFRLSGGQQQL 171 (276)
T ss_pred HhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhCCcccCCHHHHHH
Confidence 78999999999999999999999642 12344443 4456666665432 223445677899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHh
Q 000432 1407 FCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1407 l~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
++||||++++|+||||||||++||..+.+.+.+.|++..+++|||+|+|+++.+.+ ||||++|++|++++.|+++++.+
T Consensus 172 l~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 251 (276)
T PRK14271 172 LCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFS 251 (276)
T ss_pred HHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHh
Confidence 99999999999999999999999999999999999987667899999999999876 99999999999999999999987
Q ss_pred cC
Q 000432 1486 RE 1487 (1513)
Q Consensus 1486 ~~ 1487 (1513)
.+
T Consensus 252 ~~ 253 (276)
T PRK14271 252 SP 253 (276)
T ss_pred Cc
Confidence 64
No 252
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=1.4e-38 Score=364.86 Aligned_cols=222 Identities=26% Similarity=0.389 Sum_probs=187.2
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC--------h
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIG--------L 1332 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~--------l 1332 (1513)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ .
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 3 AIEVKNLVKKFHG--QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred cEEEeceEEEECC--eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 3899999999964 35999999999999999999999999999999999999999999999999987542 3
Q ss_pred HHhhhceEEEcCCCcccc-CcHhhccCCC----CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhH
Q 000432 1333 HDLRSRLGIIPQDPTLFD-GTVRGNLDPL----VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQ 1403 (1513)
Q Consensus 1333 ~~LR~~isiVpQdp~LF~-gTIR~NLdp~----~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQ 1403 (1513)
..+|++++++||+|.+|. .|+++|+... .... ++.+.++++..++.+. ......+|||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LS~Gq 149 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGK-----------ETSYPRRLSGGQ 149 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcch-----------hhCChhhCChHH
Confidence 567889999999999886 6999999631 1222 2345666776666543 223456899999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChh
Q 000432 1404 RQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPT 1481 (1513)
Q Consensus 1404 RQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~ 1481 (1513)
|||++||||++.+|+||||||||++||+++.+.+.+.|++.. +++|+|+|+|+++.+.+ ||+|++|++|++++.|+++
T Consensus 150 ~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 229 (250)
T PRK11264 150 QQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAK 229 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999998765 37899999999999976 9999999999999999999
Q ss_pred HHHhcCC-hHHHHHH
Q 000432 1482 KLLERED-SFFSQLI 1495 (1513)
Q Consensus 1482 eLl~~~~-~~f~~l~ 1495 (1513)
++.+.+. ...++++
T Consensus 230 ~~~~~~~~~~~~~~~ 244 (250)
T PRK11264 230 ALFADPQQPRTRQFL 244 (250)
T ss_pred HHhcCCCCHHHHHHH
Confidence 9876533 3334444
No 253
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.7e-39 Score=373.86 Aligned_cols=215 Identities=26% Similarity=0.395 Sum_probs=184.0
Q ss_pred EEEEEEEEEEcCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCC----ChHH
Q 000432 1262 ISFHNLQIRYAEHL---PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKI----GLHD 1334 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i----~l~~ 1334 (1513)
|+++||+++|+... .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997532 3599999999999999999999999999999999999999999999999999764 3567
Q ss_pred hhhceEEEcCCC--ccccCcHhhccCCC---CCCCHHH----HHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1335 LRSRLGIIPQDP--TLFDGTVRGNLDPL---VQYSDKQ----VWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1335 LR~~isiVpQdp--~LF~gTIR~NLdp~---~~~sdee----i~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
+|++++|+||+| .+|+.|+++|+.+. ...++++ +.++++..++.+. .......+|||||||
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LSgG~~q 152 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISES----------LFEKNPFELSGGQMR 152 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------hhhCCcccCCHHHHH
Confidence 889999999998 68899999999642 1223332 4456666666421 123345679999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKL 1483 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eL 1483 (1513)
|++||||++++|++|||||||++||+++.+.+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 rv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (280)
T PRK13649 153 RVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDI 232 (280)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998764 37899999999999865 999999999999999999998
Q ss_pred Hhc
Q 000432 1484 LER 1486 (1513)
Q Consensus 1484 l~~ 1486 (1513)
.+.
T Consensus 233 ~~~ 235 (280)
T PRK13649 233 FQD 235 (280)
T ss_pred hcC
Confidence 765
No 254
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=4e-39 Score=364.66 Aligned_cols=211 Identities=25% Similarity=0.409 Sum_probs=179.5
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHH-hhhceE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHD-LRSRLG 1340 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~-LR~~is 1340 (1513)
|+++||+++|++. ++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+... .+++++
T Consensus 1 l~~~~l~~~~~~~--~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 78 (230)
T TIGR03410 1 LEVSNLNVYYGQS--HILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIA 78 (230)
T ss_pred CEEEeEEEEeCCe--EEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeE
Confidence 5789999999743 5999999999999999999999999999999999999999999999999999887655 467899
Q ss_pred EEcCCCccccC-cHhhccCCC-CC--CCHHH-HHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHcc
Q 000432 1341 IIPQDPTLFDG-TVRGNLDPL-VQ--YSDKQ-VWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLK 1415 (1513)
Q Consensus 1341 iVpQdp~LF~g-TIR~NLdp~-~~--~sdee-i~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr 1415 (1513)
++||++.+|.+ |+++|+... .. .++++ ..++++..+ +++........+||||||||++||||+++
T Consensus 79 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~~ 148 (230)
T TIGR03410 79 YVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALVT 148 (230)
T ss_pred EeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999986 999999632 11 11222 233333322 23333444556799999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1416 KSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1416 ~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
+|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 149 ~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 149 RPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 9999999999999999999999999988653 7899999999999986 9999999999999999999973
No 255
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=7.6e-39 Score=378.62 Aligned_cols=228 Identities=21% Similarity=0.367 Sum_probs=190.2
Q ss_pred eEEEEEEEEEEcC--CCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCC---CcEEEEcCeeCCCCChHHh
Q 000432 1261 TISFHNLQIRYAE--HLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPT---MGSIIIDNVDITKIGLHDL 1335 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~--~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~---~G~I~IDGvdI~~i~l~~L 1335 (1513)
.++++|++++|+. +...+|+||||+|++||++||||+||||||||+++|+|+++|. +|+|.+||.|+.+++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 5999999999963 2235999999999999999999999999999999999999996 9999999999999988776
Q ss_pred h----hceEEEcCCC--cccc-CcHhhccC----CCCCCCH----HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCC
Q 000432 1336 R----SRLGIIPQDP--TLFD-GTVRGNLD----PLVQYSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWS 1400 (1513)
Q Consensus 1336 R----~~isiVpQdp--~LF~-gTIR~NLd----p~~~~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLS 1400 (1513)
| ++|++||||| .++. -|+.+|+. .....+. +++.++|+.+++.+ +. ..+......||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~-------~~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPE-------AR-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCC-------hH-HHhcCCcccCC
Confidence 4 4799999999 4554 47777763 2222232 34566777776642 11 12345567899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEe
Q 000432 1401 VGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEY 1477 (1513)
Q Consensus 1401 gGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~ 1477 (1513)
||||||++|||||+.+|++||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999987654 7899999999999975 999999999999999
Q ss_pred cChhHHHhcCChHHHH-HHH
Q 000432 1478 DSPTKLLEREDSFFSQ-LIK 1496 (1513)
Q Consensus 1478 Gtp~eLl~~~~~~f~~-l~~ 1496 (1513)
|+++++.+++...|.+ |++
T Consensus 244 g~~~~i~~~p~~pyt~~l~~ 263 (330)
T PRK09473 244 GNARDVFYQPSHPYSIGLLN 263 (330)
T ss_pred CCHHHHHhCCCCHHHHHHHH
Confidence 9999999876655555 444
No 256
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-39 Score=374.66 Aligned_cols=218 Identities=27% Similarity=0.402 Sum_probs=183.6
Q ss_pred CceEEEEEEEEEEcCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCC----C-
Q 000432 1259 VGTISFHNLQIRYAEHL---PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITK----I- 1330 (1513)
Q Consensus 1259 ~g~I~f~nvsf~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~----i- 1330 (1513)
.|.|+++|++++|+... .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.. .
T Consensus 4 ~~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~ 83 (289)
T PRK13645 4 SKDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIK 83 (289)
T ss_pred cceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEccccccccc
Confidence 46899999999996532 259999999999999999999999999999999999999999999999999853 2
Q ss_pred ChHHhhhceEEEcCCC--ccccCcHhhccCCCC---CCCHH----HHHHHHHHcCCcHHHHhhhccccchhccCCCCCCh
Q 000432 1331 GLHDLRSRLGIIPQDP--TLFDGTVRGNLDPLV---QYSDK----QVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSV 1401 (1513)
Q Consensus 1331 ~l~~LR~~isiVpQdp--~LF~gTIR~NLdp~~---~~sde----ei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSg 1401 (1513)
+...+|++++|+||+| .+|..|+++|+.+.. ..+.+ .+.++++..++.+ ........+|||
T Consensus 84 ~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~----------~~~~~~~~~LS~ 153 (289)
T PRK13645 84 EVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPE----------DYVKRSPFELSG 153 (289)
T ss_pred cHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hHhcCChhhCCH
Confidence 4567889999999998 478889999996421 22332 3345555555521 112234567999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEec
Q 000432 1402 GQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1402 GQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~G 1478 (1513)
|||||++|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|
T Consensus 154 Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g 233 (289)
T PRK13645 154 GQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIG 233 (289)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999987653 7899999999998865 9999999999999999
Q ss_pred ChhHHHhc
Q 000432 1479 SPTKLLER 1486 (1513)
Q Consensus 1479 tp~eLl~~ 1486 (1513)
+++++.+.
T Consensus 234 ~~~~~~~~ 241 (289)
T PRK13645 234 SPFEIFSN 241 (289)
T ss_pred CHHHHhcC
Confidence 99998764
No 257
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=6.7e-39 Score=346.30 Aligned_cols=172 Identities=35% Similarity=0.602 Sum_probs=162.9
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|+.+..++++|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+++.+.+|+++++
T Consensus 1 i~~~~l~~~~~~~~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (173)
T cd03246 1 LEVENVSFRYPGAEPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVGY 80 (173)
T ss_pred CEEEEEEEEcCCCCCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheEE
Confidence 57899999997544469999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000432 1342 IPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILV 1421 (1513)
Q Consensus 1342 VpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILi 1421 (1513)
+||+|.+|++|+++|+ ||||||||++||||++++|++|+
T Consensus 81 ~~q~~~~~~~tv~~~l-----------------------------------------LS~G~~qrv~la~al~~~p~~ll 119 (173)
T cd03246 81 LPQDDELFSGSIAENI-----------------------------------------LSGGQRQRLGLARALYGNPRILV 119 (173)
T ss_pred ECCCCccccCcHHHHC-----------------------------------------cCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 99999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEEeCCEE
Q 000432 1422 LDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVIDSDLVLVLSDGRI 1474 (1513)
Q Consensus 1422 LDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~~DrIlVLd~G~I 1474 (1513)
|||||++||+.+...+.+.|++.. +++|+|+++|+++.+..||+|++|++|++
T Consensus 120 lDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 120 LDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 999999999999999999998764 47899999999999988999999999975
No 258
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-38 Score=367.11 Aligned_cols=221 Identities=25% Similarity=0.432 Sum_probs=191.2
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCC-----CcEEEEcCeeCCC--CCh
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPT-----MGSIIIDNVDITK--IGL 1332 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~-----~G~I~IDGvdI~~--i~l 1332 (1513)
+.|+++||+++|+. +.+|+|+||+|++||.+||+|++|||||||+++|.|+++|+ +|+|.+||.|++. .+.
T Consensus 6 ~~l~~~nl~~~~~~--~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~~ 83 (261)
T PRK14258 6 PAIKVNNLSFYYDT--QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVNL 83 (261)
T ss_pred ceEEEeeEEEEeCC--eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccch
Confidence 47999999999964 35999999999999999999999999999999999999985 8999999999853 345
Q ss_pred HHhhhceEEEcCCCccccCcHhhccCCC---CCC-C----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHH
Q 000432 1333 HDLRSRLGIIPQDPTLFDGTVRGNLDPL---VQY-S----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQR 1404 (1513)
Q Consensus 1333 ~~LR~~isiVpQdp~LF~gTIR~NLdp~---~~~-s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQR 1404 (1513)
..+|+.++++||++.+|..|++||+... ... + ++++.++++.+++.+++.. .....+.+||||||
T Consensus 84 ~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LSgGq~ 156 (261)
T PRK14258 84 NRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKH-------KIHKSALDLSGGQQ 156 (261)
T ss_pred HHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhh-------HhcCCcccCCHHHH
Confidence 6788999999999999999999999632 111 2 2456778888888765543 23445678999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeC-----CEEeE
Q 000432 1405 QLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSD-----GRIAE 1476 (1513)
Q Consensus 1405 Qrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~-----G~IvE 1476 (1513)
||++||||++++|+||+|||||+++|.++...+.+.|++.. .++|+|+|||+++.+.. ||+|++|++ |++++
T Consensus 157 qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~~ 236 (261)
T PRK14258 157 QRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLVE 236 (261)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEEE
Confidence 99999999999999999999999999999999999998743 48999999999999876 899999999 99999
Q ss_pred ecChhHHHhcCCh
Q 000432 1477 YDSPTKLLEREDS 1489 (1513)
Q Consensus 1477 ~Gtp~eLl~~~~~ 1489 (1513)
.|+|+++.+++..
T Consensus 237 ~~~~~~~~~~~~~ 249 (261)
T PRK14258 237 FGLTKKIFNSPHD 249 (261)
T ss_pred eCCHHHHHhCCCC
Confidence 9999999876544
No 259
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.8e-39 Score=356.98 Aligned_cols=200 Identities=27% Similarity=0.408 Sum_probs=175.9
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|++. . .|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+. .|++++|
T Consensus 1 i~~~~l~~~~~~~--~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 74 (211)
T cd03298 1 VRLDKIRFSYGEQ--P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSM 74 (211)
T ss_pred CEEEeEEEEeCCE--e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEE
Confidence 5799999999642 2 39999999999999999999999999999999999999999999999987654 4678999
Q ss_pred EcCCCccccC-cHhhccCCCCC-------CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1342 IPQDPTLFDG-TVRGNLDPLVQ-------YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1342 VpQdp~LF~g-TIR~NLdp~~~-------~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+||+|.+|.+ |+++|+..... .+++++.++++.+++.+...+.| .+||||||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~ia~al 143 (211)
T cd03298 75 LFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----------GELSGGERQRVALARVL 143 (211)
T ss_pred EecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999976 99999974211 23557888999999876655544 37999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEec
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~G 1478 (1513)
+++|++|+|||||++||.++...+.+.|++.. .++|+|+|+|+++.+.. ||+|++|++|++++.|
T Consensus 144 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 144 VRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999865 37899999999999976 9999999999998865
No 260
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=372.05 Aligned_cols=215 Identities=29% Similarity=0.447 Sum_probs=184.2
Q ss_pred eEEEEEEEEEEcCCC---CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCC----ChH
Q 000432 1261 TISFHNLQIRYAEHL---PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKI----GLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~---~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i----~l~ 1333 (1513)
.|+++|++++|++.. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999997432 3599999999999999999999999999999999999999999999999998753 346
Q ss_pred HhhhceEEEcCCC--ccccCcHhhccCCC---CCCCH----HHHHHHHHHcCCc-HHHHhhhccccchhccCCCCCChhH
Q 000432 1334 DLRSRLGIIPQDP--TLFDGTVRGNLDPL---VQYSD----KQVWEALDKCQLG-DLVRAKEEKLDSTVAENGENWSVGQ 1403 (1513)
Q Consensus 1334 ~LR~~isiVpQdp--~LF~gTIR~NLdp~---~~~sd----eei~~aL~~~~l~-~~I~~lp~gLdt~V~e~G~nLSgGQ 1403 (1513)
..|++++++||+| .+|..|+++|+... ...+. +.+.++++.+++. ++. .....+|||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~~LSgGq 150 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLI-----------SKSPFELSGGQ 150 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHh-----------hCCcccCCHHH
Confidence 6788999999998 58888999999631 12222 3456677777775 332 22346799999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChh
Q 000432 1404 RQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPT 1481 (1513)
Q Consensus 1404 RQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~ 1481 (1513)
|||++|||||+.+|++|||||||++||+++...+.+.|++.. ++.|||+++|+++.+.. ||+|++|++|++++.|+++
T Consensus 151 ~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 151 MRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999998864 47899999999999865 9999999999999999999
Q ss_pred HHHhc
Q 000432 1482 KLLER 1486 (1513)
Q Consensus 1482 eLl~~ 1486 (1513)
++.+.
T Consensus 231 ~~~~~ 235 (287)
T PRK13641 231 EIFSD 235 (287)
T ss_pred HHhcC
Confidence 98764
No 261
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.3e-38 Score=361.81 Aligned_cols=210 Identities=27% Similarity=0.428 Sum_probs=184.4
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|++. ++|+|+||+|.+||++||+|++|||||||+++|.|+++|++|+|.+||.++.+.+. .|+.++|
T Consensus 1 i~i~~l~~~~~~~--~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~~ 76 (237)
T TIGR00968 1 IEIANISKRFGSF--QALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIGF 76 (237)
T ss_pred CEEEEEEEEECCe--eeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEEE
Confidence 5799999999743 59999999999999999999999999999999999999999999999999987653 4788999
Q ss_pred EcCCCccccC-cHhhccCCCC---CC----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1342 IPQDPTLFDG-TVRGNLDPLV---QY----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1342 VpQdp~LF~g-TIR~NLdp~~---~~----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+||+|.+|.+ |+++|+.... .. .++++.++++..++.+...+. ..+||+||+||++||||+
T Consensus 77 ~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~lS~G~~qrl~laral 145 (237)
T TIGR00968 77 VFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRY-----------PNQLSGGQRQRVALARAL 145 (237)
T ss_pred EecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCC-----------hhhCCHHHHHHHHHHHHH
Confidence 9999999976 9999996421 11 234567788888776554332 357999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
+++|++++|||||++||.++.+.+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|+++|.|+++++++.
T Consensus 146 ~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 146 AVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999999999999987654 7999999999999876 999999999999999999999865
No 262
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-38 Score=366.68 Aligned_cols=218 Identities=24% Similarity=0.433 Sum_probs=187.2
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCC--CChH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-----TMGSIIIDNVDITK--IGLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-----~~G~I~IDGvdI~~--i~l~ 1333 (1513)
.++++||+++|++. ++|+|+||+|++||.+||+|++|||||||+++|.|+++| ++|+|.+||.++.. .+..
T Consensus 4 ~l~i~~v~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~ 81 (258)
T PRK14241 4 RIDVKDLNIYYGSF--HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPV 81 (258)
T ss_pred cEEEeeEEEEECCE--eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChH
Confidence 58999999999743 599999999999999999999999999999999999974 69999999999864 4456
Q ss_pred HhhhceEEEcCCCcccc-CcHhhccCCC----CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHH
Q 000432 1334 DLRSRLGIIPQDPTLFD-GTVRGNLDPL----VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQR 1404 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~-gTIR~NLdp~----~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQR 1404 (1513)
.+|+.++++||++.+|. .|+++|+... +..+ ++++.++++.+++.+.+. ........+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 154 (258)
T PRK14241 82 AVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVK-------DRLDKPGGGLSGGQQ 154 (258)
T ss_pred HHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHHH
Confidence 78899999999999997 5999999631 1111 345677888888765432 122344568999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEe------CCEEeEe
Q 000432 1405 QLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLS------DGRIAEY 1477 (1513)
Q Consensus 1405 Qrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd------~G~IvE~ 1477 (1513)
||++||||++++|++|+|||||++||+.+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|+ +|+|++.
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~~ 234 (258)
T PRK14241 155 QRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVEI 234 (258)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEec
Confidence 9999999999999999999999999999999999999987667899999999999865 99999997 8999999
Q ss_pred cChhHHHhcC
Q 000432 1478 DSPTKLLERE 1487 (1513)
Q Consensus 1478 Gtp~eLl~~~ 1487 (1513)
|++++++.++
T Consensus 235 ~~~~~~~~~~ 244 (258)
T PRK14241 235 DDTEKIFSNP 244 (258)
T ss_pred CCHHHHHhCc
Confidence 9999998754
No 263
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-38 Score=363.95 Aligned_cols=218 Identities=26% Similarity=0.437 Sum_probs=189.4
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCC-CCChHH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-----TMGSIIIDNVDIT-KIGLHD 1334 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-----~~G~I~IDGvdI~-~i~l~~ 1334 (1513)
.++++|++++|++ .++|+|+||+|++||.+||+|++|||||||+++|.|+++| ++|+|.+||.++. ..+...
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~ 80 (249)
T PRK14253 3 KFNIENLDLFYGE--NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVAD 80 (249)
T ss_pred eEEEeccEEEECC--eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchHH
Confidence 4899999999974 3599999999999999999999999999999999999986 5999999999986 456678
Q ss_pred hhhceEEEcCCCccccCcHhhccCCC---CCC-C----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHH
Q 000432 1335 LRSRLGIIPQDPTLFDGTVRGNLDPL---VQY-S----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQL 1406 (1513)
Q Consensus 1335 LR~~isiVpQdp~LF~gTIR~NLdp~---~~~-s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQr 1406 (1513)
+|+.++|+||+|.+|.+|+++|+... ... + ++++.++++.+++.+.+. ........+||||||||
T Consensus 81 ~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~LS~G~~qr 153 (249)
T PRK14253 81 LRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVK-------DRLKSHAFGLSGGQQQR 153 (249)
T ss_pred HHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhh-------HHhhcCcccCCHHHHHH
Confidence 89999999999999999999999642 111 1 234566788888765442 22344556899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHh
Q 000432 1407 FCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1407 l~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
++||||++.+|+||||||||++||..+...+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 154 v~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 233 (249)
T PRK14253 154 LCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIFS 233 (249)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHc
Confidence 99999999999999999999999999999999999988777999999999999887 99999999999999999999876
Q ss_pred cC
Q 000432 1486 RE 1487 (1513)
Q Consensus 1486 ~~ 1487 (1513)
++
T Consensus 234 ~~ 235 (249)
T PRK14253 234 NP 235 (249)
T ss_pred CC
Confidence 53
No 264
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-39 Score=368.87 Aligned_cols=214 Identities=21% Similarity=0.371 Sum_probs=189.4
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhce
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRL 1339 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~i 1339 (1513)
-.|+++||+++|++ ..+|+|+||++++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 6 ~~l~i~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 6 ARLRGEQLTLGYGK--YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred cEEEEEEEEEEECC--EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 46999999999974 3599999999999999999999999999999999999999999999999999988888889999
Q ss_pred EEEcCCCcccc-CcHhhccCCCC-----------CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHH
Q 000432 1340 GIIPQDPTLFD-GTVRGNLDPLV-----------QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLF 1407 (1513)
Q Consensus 1340 siVpQdp~LF~-gTIR~NLdp~~-----------~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl 1407 (1513)
+|+||++.+|. .|+++|+.+.. +..+++++++++..++.+...+ ...+||||||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~Gq~qrv 152 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQ-----------SVDTLSGGQRQRA 152 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcC-----------CcccCChHHHHHH
Confidence 99999998875 69999996421 1123467888888888654332 3467999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1408 CLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1408 ~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
+||||++++|++|+|||||++||+++...+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 153 WIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999988643 7899999999998876 9999999999999999999987
Q ss_pred hc
Q 000432 1485 ER 1486 (1513)
Q Consensus 1485 ~~ 1486 (1513)
..
T Consensus 233 ~~ 234 (265)
T PRK10253 233 TA 234 (265)
T ss_pred hH
Confidence 53
No 265
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-38 Score=362.27 Aligned_cols=214 Identities=23% Similarity=0.352 Sum_probs=180.5
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHH-hhhce
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHD-LRSRL 1339 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~-LR~~i 1339 (1513)
.|+++|++++|+. .++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+.+..+ .|+++
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 82 (237)
T PRK11614 5 MLSFDKVSAHYGK--IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAV 82 (237)
T ss_pred EEEEEeEEEeeCC--ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCE
Confidence 4899999999964 35999999999999999999999999999999999999999999999999999887655 67889
Q ss_pred EEEcCCCccccC-cHhhccCCCCC-CCHHH----HHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1340 GIIPQDPTLFDG-TVRGNLDPLVQ-YSDKQ----VWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1340 siVpQdp~LF~g-TIR~NLdp~~~-~sdee----i~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+++||++.+|.+ |+++|+..... .+.++ +.++++.. + +++.........||||||||++||||+
T Consensus 83 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~---------~-~l~~~~~~~~~~LS~G~~qrl~la~al 152 (237)
T PRK11614 83 AIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELF---------P-RLHERRIQRAGTMSGGEQQMLAIGRAL 152 (237)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHH---------H-HHHHHHhCchhhCCHHHHHHHHHHHHH
Confidence 999999999985 99999964211 12222 22333322 1 112122234568999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
+++|+||+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|++++.|+++++.++
T Consensus 153 ~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (237)
T PRK11614 153 MSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLAN 227 (237)
T ss_pred HhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhcC
Confidence 99999999999999999999999999998764 48999999999998765 999999999999999999999754
No 266
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.2e-38 Score=360.22 Aligned_cols=206 Identities=20% Similarity=0.297 Sum_probs=179.9
Q ss_pred eEEEEEEEEEEcCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHH---h
Q 000432 1261 TISFHNLQIRYAEHL--PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHD---L 1335 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~---L 1335 (1513)
.|+++|++++|+++. .++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+.+..+ .
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 599999999997532 25999999999999999999999999999999999999999999999999998887654 2
Q ss_pred -hhceEEEcCCCccccC-cHhhccCCC---CCC----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHH
Q 000432 1336 -RSRLGIIPQDPTLFDG-TVRGNLDPL---VQY----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQL 1406 (1513)
Q Consensus 1336 -R~~isiVpQdp~LF~g-TIR~NLdp~---~~~----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQr 1406 (1513)
+++++++||+|.+|.+ |+++|+... ... ..+++.++++..++.+...+.| .+||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLP-----------AQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----------hhCCHHHHHH
Confidence 3689999999999875 999999631 111 2356788888888876654443 4699999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCEEeEe
Q 000432 1407 FCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVIDSDLVLVLSDGRIAEY 1477 (1513)
Q Consensus 1407 l~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~ 1477 (1513)
++|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|||+|+|+++.+..||+|++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999999987642 7899999999999988999999999999874
No 267
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-38 Score=372.00 Aligned_cols=221 Identities=28% Similarity=0.489 Sum_probs=191.5
Q ss_pred CCceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCCC--
Q 000432 1258 DVGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE-----PTMGSIIIDNVDITKI-- 1330 (1513)
Q Consensus 1258 ~~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e-----p~~G~I~IDGvdI~~i-- 1330 (1513)
.+..|+++||+++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++ |++|+|.+||.++...
T Consensus 42 ~~~~l~i~nl~~~~~~--~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~ 119 (305)
T PRK14264 42 GDAKLSVEDLDVYYGD--DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGV 119 (305)
T ss_pred CCceEEEEEEEEEeCC--eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccc
Confidence 3457999999999975 359999999999999999999999999999999999986 6899999999999753
Q ss_pred ChHHhhhceEEEcCCCccccCcHhhccCCCC--------------------CCCHHHHHHHHHHcCCcHHHHhhhccccc
Q 000432 1331 GLHDLRSRLGIIPQDPTLFDGTVRGNLDPLV--------------------QYSDKQVWEALDKCQLGDLVRAKEEKLDS 1390 (1513)
Q Consensus 1331 ~l~~LR~~isiVpQdp~LF~gTIR~NLdp~~--------------------~~sdeei~~aL~~~~l~~~I~~lp~gLdt 1390 (1513)
+...+|++++|+||++.+|.+|+++|+.... +..++++.++++.+++.+.+ ++
T Consensus 120 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~ 192 (305)
T PRK14264 120 NLVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV-------ND 192 (305)
T ss_pred cHHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh-------hH
Confidence 4667889999999999999999999996320 01234577888888775443 23
Q ss_pred hhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEE-EE
Q 000432 1391 TVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLV-LV 1468 (1513)
Q Consensus 1391 ~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrI-lV 1468 (1513)
.......+||||||||++|||||+++|+||||||||++||..+...+.+.|++..++.|+|+|+|+++.+.. ||+| ++
T Consensus 193 ~~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~ 272 (305)
T PRK14264 193 RLDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVF 272 (305)
T ss_pred HhcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEE
Confidence 445667889999999999999999999999999999999999999999999988777899999999999876 9997 57
Q ss_pred EeCCEEeEecChhHHHhcC
Q 000432 1469 LSDGRIAEYDSPTKLLERE 1487 (1513)
Q Consensus 1469 Ld~G~IvE~Gtp~eLl~~~ 1487 (1513)
|++|++++.|+++++.+.+
T Consensus 273 l~~G~i~~~g~~~~~~~~~ 291 (305)
T PRK14264 273 LTGGELVEYDDTDKIFENP 291 (305)
T ss_pred ecCCEEEEeCCHHHHHhCc
Confidence 8999999999999997653
No 268
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-38 Score=381.31 Aligned_cols=217 Identities=23% Similarity=0.381 Sum_probs=190.3
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhce
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRL 1339 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~i 1339 (1513)
..|+++|++++|+. ..+|+|+||+|++||.++|+|+||||||||+++|.|+.+|++|+|.+||.++.+++. .|+++
T Consensus 18 ~~l~l~~v~~~~~~--~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 93 (377)
T PRK11607 18 PLLEIRNLTKSFDG--QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPI 93 (377)
T ss_pred ceEEEEeEEEEECC--EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 36999999999964 359999999999999999999999999999999999999999999999999987764 47789
Q ss_pred EEEcCCCccccC-cHhhccCCC---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHH
Q 000432 1340 GIIPQDPTLFDG-TVRGNLDPL---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGR 1411 (1513)
Q Consensus 1340 siVpQdp~LF~g-TIR~NLdp~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LAR 1411 (1513)
+||+|++.||.. |+++|+.+. ...+ ++++.++++..++.++..+.| .+||||||||++|||
T Consensus 94 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----------~~LSgGq~QRVaLAR 162 (377)
T PRK11607 94 NMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKP-----------HQLSGGQRQRVALAR 162 (377)
T ss_pred EEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHH
Confidence 999999999975 999999742 1222 345678888888876655544 368999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCC
Q 000432 1412 TLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLERED 1488 (1513)
Q Consensus 1412 ALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~ 1488 (1513)
||+++|++|+||||||+||..+...+.+.|++.. .+.|+|+|||+++.+.. ||||+||++|++++.|+|+++.+++.
T Consensus 163 AL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p~ 242 (377)
T PRK11607 163 SLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHPT 242 (377)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCCc
Confidence 9999999999999999999999999988877654 37899999999998765 99999999999999999999998876
Q ss_pred hHH
Q 000432 1489 SFF 1491 (1513)
Q Consensus 1489 ~~f 1491 (1513)
..|
T Consensus 243 ~~~ 245 (377)
T PRK11607 243 TRY 245 (377)
T ss_pred cHH
Confidence 554
No 269
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-38 Score=366.37 Aligned_cols=220 Identities=20% Similarity=0.407 Sum_probs=190.3
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCC--CCh
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-----TMGSIIIDNVDITK--IGL 1332 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-----~~G~I~IDGvdI~~--i~l 1332 (1513)
-.|+++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 19 ~~l~~~nl~~~~~~--~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~ 96 (274)
T PRK14265 19 SVFEVEGVKVFYGG--FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINS 96 (274)
T ss_pred ceEEEeeEEEEeCC--eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchh
Confidence 37999999999974 3599999999999999999999999999999999999864 69999999999864 344
Q ss_pred HHhhhceEEEcCCCccccCcHhhccCCCC---C---CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHH
Q 000432 1333 HDLRSRLGIIPQDPTLFDGTVRGNLDPLV---Q---YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQL 1406 (1513)
Q Consensus 1333 ~~LR~~isiVpQdp~LF~gTIR~NLdp~~---~---~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQr 1406 (1513)
..+|++++|+||++.+|++|+++|+.... . ..++++.++++.+++.+.+.. ........||||||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LSgGq~qr 169 (274)
T PRK14265 97 VKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKD-------KLKEKGTALSGGQQQR 169 (274)
T ss_pred HHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHH-------HhcCCcccCCHHHHHH
Confidence 56789999999999999999999996421 1 124556778888888665432 2234457899999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEe---------CCEEeE
Q 000432 1407 FCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLS---------DGRIAE 1476 (1513)
Q Consensus 1407 l~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd---------~G~IvE 1476 (1513)
++|||||+++|+||||||||++||..+...+.+.|++..+++|||+|+|+++.+.. ||+|++|+ +|++++
T Consensus 170 v~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~~ 249 (274)
T PRK14265 170 LCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLVE 249 (274)
T ss_pred HHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999988778999999999999875 99999997 899999
Q ss_pred ecChhHHHhcCC
Q 000432 1477 YDSPTKLLERED 1488 (1513)
Q Consensus 1477 ~Gtp~eLl~~~~ 1488 (1513)
.|+++++.+++.
T Consensus 250 ~g~~~~~~~~~~ 261 (274)
T PRK14265 250 FSPTEQMFGSPQ 261 (274)
T ss_pred eCCHHHHHhCCC
Confidence 999999987643
No 270
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-39 Score=346.45 Aligned_cols=201 Identities=29% Similarity=0.460 Sum_probs=169.3
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------EE
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------KA 698 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~a 698 (1513)
|+|+|+|+.|. ++.+++|+||+|++||+++++|||||||||+|++|.++++|++|+|.++|. +|
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 78999999997 367999999999999999999999999999999999999999999999994 59
Q ss_pred EEcCCCccc-CccHHHHHccCC---CCCchHHHHH----HHHHhcHH-HHhhccCCCCccccCCCCCCChHHHHHHHHHH
Q 000432 699 YVPQSPWIL-TGNIRENILFGN---QYDSCKYDRT----VEACALVK-DFELFASGDLTEIGERGINMSGGQKQRIQIAR 769 (1513)
Q Consensus 699 yv~Q~~~l~-~~ti~eNI~fg~---~~~~~~~~~v----~~~~~l~~-d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lAR 769 (1513)
||-|+.-|| +-||.|||.+-- .+++++.++. ++..+|.+ ++ .......|||||+|||.+||
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~----------~~RyP~eLSGGQQQRVGv~R 148 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEY----------ADRYPHELSGGQQQRVGVAR 148 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHH----------hhcCchhcCcchhhHHHHHH
Confidence 999999999 569999998753 3455554433 33333332 11 11235689999999999999
Q ss_pred HHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCc-cccCCEEEEEeCCeEEEecChHHHHhcC
Q 000432 770 AVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEF-LPAADIILVMENGRIAQAGRFEELLKQN 846 (1513)
Q Consensus 770 al~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~-l~~~d~i~vl~~G~i~~~g~~~~l~~~~ 846 (1513)
||..+|+|+|+||||+||||-+.+++-++ +..+. -+||+|+|||+++. ++-+|+|.+|++|+|++.|++++++++.
T Consensus 149 ALAadP~ilLMDEPFgALDpI~R~~lQ~e-~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 149 ALAADPPILLMDEPFGALDPITRKQLQEE-IKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred HHhcCCCeEeecCCccccChhhHHHHHHH-HHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 99999999999999999999998877444 44332 38999999999987 6779999999999999999999999764
No 271
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-38 Score=364.54 Aligned_cols=213 Identities=25% Similarity=0.378 Sum_probs=187.3
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++|++++|+. ..+|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.+++.++...++++++
T Consensus 2 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 2 MLEARNLSVRLGG--RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred eEEEEeEEEEeCC--eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 3789999999964 35999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEcCCCcc-ccCcHhhccCCCC--C-----CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHH
Q 000432 1341 IIPQDPTL-FDGTVRGNLDPLV--Q-----YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRT 1412 (1513)
Q Consensus 1341 iVpQdp~L-F~gTIR~NLdp~~--~-----~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARA 1412 (1513)
++||++.+ +..|+++|+.... . ..++++.++++..++.+...+ ....||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGR-----------DYPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcC-----------CcccCCHHHHHHHHHHHH
Confidence 99999987 6789999996421 1 123457788888887654332 235799999999999999
Q ss_pred Hc------cCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHH
Q 000432 1413 LL------KKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKL 1483 (1513)
Q Consensus 1413 LL------r~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eL 1483 (1513)
|+ ++|++|+|||||++||+++...+.+.|++.. +++|||+++|+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999998764 47899999999999875 999999999999999999998
Q ss_pred Hhc
Q 000432 1484 LER 1486 (1513)
Q Consensus 1484 l~~ 1486 (1513)
.+.
T Consensus 229 ~~~ 231 (258)
T PRK13548 229 LTP 231 (258)
T ss_pred hCh
Confidence 764
No 272
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.3e-38 Score=367.83 Aligned_cols=227 Identities=25% Similarity=0.353 Sum_probs=190.9
Q ss_pred eEEEEEEEEEEcCC-------CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChH
Q 000432 1261 TISFHNLQIRYAEH-------LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~-------~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~ 1333 (1513)
.|+++||+++|+.. ..++|+|+||+|++||++||+||+|||||||+++|.|+++|++|+|.+||.++...+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999521 23599999999999999999999999999999999999999999999999999866666
Q ss_pred HhhhceEEEcCCCc--cccC-cHhhccCC----CCC----CCHHHHHHHHHHcCCc-HHHHhhhccccchhccCCCCCCh
Q 000432 1334 DLRSRLGIIPQDPT--LFDG-TVRGNLDP----LVQ----YSDKQVWEALDKCQLG-DLVRAKEEKLDSTVAENGENWSV 1401 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~--LF~g-TIR~NLdp----~~~----~sdeei~~aL~~~~l~-~~I~~lp~gLdt~V~e~G~nLSg 1401 (1513)
..|++++|+||+|. ++.. |+.+|+.. ... ..++++.++++.+++. +.. +. ...+|||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~----~~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHA-------SY----YPHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHH-------hc----CchhcCH
Confidence 66778999999985 4443 78888742 111 1235678899999984 322 22 2357999
Q ss_pred hHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEec
Q 000432 1402 GQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1402 GQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~G 1478 (1513)
|||||++||||++++|+||||||||++||+++...+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999864 27899999999999987 9999999999999999
Q ss_pred ChhHHHhcC-ChHHHHHHHHH
Q 000432 1479 SPTKLLERE-DSFFSQLIKEY 1498 (1513)
Q Consensus 1479 tp~eLl~~~-~~~f~~l~~~~ 1498 (1513)
+++++.+++ +..+++++..+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~ 253 (267)
T PRK15112 233 STADVLASPLHELTKRLIAGH 253 (267)
T ss_pred CHHHHhcCCCCHHHHHHHHhc
Confidence 999998764 35566676643
No 273
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-38 Score=361.54 Aligned_cols=210 Identities=26% Similarity=0.409 Sum_probs=185.5
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|+. + +|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+++++
T Consensus 1 l~~~~l~~~~~~--~-~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~~ 75 (235)
T cd03299 1 LKVENLSKDWKE--F-KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDISY 75 (235)
T ss_pred CeeEeEEEEeCC--c-eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEEE
Confidence 578999999964 3 8999999999999999999999999999999999999999999999999987654 3789999
Q ss_pred EcCCCcccc-CcHhhccCCC---CCC----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1342 IPQDPTLFD-GTVRGNLDPL---VQY----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1342 VpQdp~LF~-gTIR~NLdp~---~~~----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+||++.+|. .|+++|+... ... .++++.++++.+++.+++.+.+ .+||||||||++||||+
T Consensus 76 ~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~laral 144 (235)
T cd03299 76 VPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKP-----------ETLSGGEQQRVAIARAL 144 (235)
T ss_pred EeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCc-----------ccCCHHHHHHHHHHHHH
Confidence 999999995 6999999631 111 2346778888888877655443 46999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcC
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLERE 1487 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~ 1487 (1513)
+++|++|+|||||++||..+.+.+.+.+++..+ ++|+|+++|+++.+.+ ||+|++|++|++++.|+++++.+.+
T Consensus 145 ~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~ 221 (235)
T cd03299 145 VVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKKP 221 (235)
T ss_pred HcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhCc
Confidence 999999999999999999999999999988643 7999999999999886 9999999999999999999998764
No 274
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-38 Score=369.72 Aligned_cols=222 Identities=26% Similarity=0.416 Sum_probs=189.0
Q ss_pred CceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC-----CCCcEEEEcCeeCCCC--C
Q 000432 1259 VGTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE-----PTMGSIIIDNVDITKI--G 1331 (1513)
Q Consensus 1259 ~g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e-----p~~G~I~IDGvdI~~i--~ 1331 (1513)
...|+++||+++|+.. ++|+|+||+|++||++||+|++|||||||+++|.|+.+ |++|+|.+||.++... +
T Consensus 37 ~~~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 37 KPHVVAKNFSIYYGEF--EAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred ceEEEEeeeEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 3469999999999642 59999999999999999999999999999999999865 4999999999998653 3
Q ss_pred hHHhhhceEEEcCCCccccCcHhhccCCCC---CC-C----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhH
Q 000432 1332 LHDLRSRLGIIPQDPTLFDGTVRGNLDPLV---QY-S----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQ 1403 (1513)
Q Consensus 1332 l~~LR~~isiVpQdp~LF~gTIR~NLdp~~---~~-s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQ 1403 (1513)
...+|++++|+||+|.+|.+|+++|+.... .. + ++++.++++..++.+.+. +.+ ......|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~---~~~----~~~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVS---DRL----DKNALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchh---hHh----hCChhhCCHHH
Confidence 346789999999999999999999996421 11 1 235667788877754332 122 34456799999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhH
Q 000432 1404 RQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTK 1482 (1513)
Q Consensus 1404 RQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~e 1482 (1513)
|||++|||||+++|++|||||||++||.++...+.+.|++..+++|||+++|+++.+.+ ||+|++|++|++++.|++++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999987667899999999999876 99999999999999999999
Q ss_pred HHhcCCh
Q 000432 1483 LLEREDS 1489 (1513)
Q Consensus 1483 Ll~~~~~ 1489 (1513)
+.+++..
T Consensus 268 ~~~~~~~ 274 (286)
T PRK14275 268 LFTNPKD 274 (286)
T ss_pred HHhCCCc
Confidence 9876543
No 275
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-38 Score=370.04 Aligned_cols=213 Identities=28% Similarity=0.414 Sum_probs=185.0
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCC--CChHHhhhce
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITK--IGLHDLRSRL 1339 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~--i~l~~LR~~i 1339 (1513)
|+++||+++|+.+ .++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.+++. .+...+|+++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 80 (275)
T PRK13639 2 LETRDLKYSYPDG-TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKTV 80 (275)
T ss_pred EEEEEEEEEeCCC-CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhhe
Confidence 7899999999643 359999999999999999999999999999999999999999999999999853 3345688999
Q ss_pred EEEcCCC--ccccCcHhhccCCCC---CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHH
Q 000432 1340 GIIPQDP--TLFDGTVRGNLDPLV---QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLG 1410 (1513)
Q Consensus 1340 siVpQdp--~LF~gTIR~NLdp~~---~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LA 1410 (1513)
+|+||+| .+|..|+++|+.... ..+ .+++.++++.+++.++... . ..+||||||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-------~----~~~LS~Gq~qrv~la 149 (275)
T PRK13639 81 GIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENK-------P----PHHLSGGQKKRVAIA 149 (275)
T ss_pred EEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcC-------C----hhhCCHHHHHHHHHH
Confidence 9999998 578899999996311 122 2456778888888654322 2 347999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1411 RTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1411 RALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
||++++|++|||||||++||+.+...+.+.|++.. +++|||+++|+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 150 ral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 150 GILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999998865 37899999999999875 999999999999999999998764
No 276
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-38 Score=363.44 Aligned_cols=203 Identities=26% Similarity=0.397 Sum_probs=179.4
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++. .+|++++
T Consensus 12 ~l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i~ 84 (257)
T PRK11247 12 PLLLNAVSKRYGE--RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDTR 84 (257)
T ss_pred cEEEEEEEEEECC--cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCceE
Confidence 5999999999964 35999999999999999999999999999999999999999999999998763 5688999
Q ss_pred EEcCCCcccc-CcHhhccCCC-CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCC
Q 000432 1341 IIPQDPTLFD-GTVRGNLDPL-VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSS 1418 (1513)
Q Consensus 1341 iVpQdp~LF~-gTIR~NLdp~-~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ 1418 (1513)
|+||+|.+|. .|+++|+.+. ....++++.++++..++.+...+ ...+||||||||++|||||+++|+
T Consensus 85 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGqkqrl~laraL~~~p~ 153 (257)
T PRK11247 85 LMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLADRANE-----------WPAALSGGQKQRVALARALIHRPG 153 (257)
T ss_pred EEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChhHhcC-----------ChhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999999987 6999999753 22235678888999888665432 346799999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChh
Q 000432 1419 ILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPT 1481 (1513)
Q Consensus 1419 ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~ 1481 (1513)
+|||||||++||+.+...+.+.|++.. .++|+|+|+|+++.+.. ||+|++|++|++++.|+.+
T Consensus 154 lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 154 LLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 999999999999999999999998764 37899999999999865 9999999999999988754
No 277
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=364.40 Aligned_cols=222 Identities=25% Similarity=0.408 Sum_probs=186.8
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCC-----CcEEEEcCeeCCC--CChH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPT-----MGSIIIDNVDITK--IGLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~-----~G~I~IDGvdI~~--i~l~ 1333 (1513)
.++++||+++|++ .++|+|+||+|++||.+||+|++|||||||+++|.|+++|+ +|+|.+||.++.. .+..
T Consensus 4 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 81 (252)
T PRK14272 4 LLSAQDVNIYYGD--KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPV 81 (252)
T ss_pred EEEEeeeEEEECC--EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHH
Confidence 4889999999964 35999999999999999999999999999999999999874 8999999999975 3455
Q ss_pred HhhhceEEEcCCCccccC-cHhhccCCC---CCC-CHHH----HHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHH
Q 000432 1334 DLRSRLGIIPQDPTLFDG-TVRGNLDPL---VQY-SDKQ----VWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQR 1404 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~g-TIR~NLdp~---~~~-sdee----i~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQR 1404 (1513)
.+|++++|+||+|.+|.+ |+++|+... ... .+++ ..+.++..++.+.+ ++.++.+ ..+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~~----~~~LS~G~~ 154 (252)
T PRK14272 82 AMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEV---KDRLKTP----ATGLSGGQQ 154 (252)
T ss_pred HhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhh---hhhhcCC----cccCCHHHH
Confidence 788999999999999985 999999631 111 2333 33345555554432 2334443 467999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHH
Q 000432 1405 QLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKL 1483 (1513)
Q Consensus 1405 Qrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eL 1483 (1513)
||++||||++++|+||+|||||++||..+...+.+.|++..+++|+|+++|+++.+.+ ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14272 155 QRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQL 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999987678999999999999986 999999999999999999999
Q ss_pred HhcCChHH
Q 000432 1484 LEREDSFF 1491 (1513)
Q Consensus 1484 l~~~~~~f 1491 (1513)
++++...+
T Consensus 235 ~~~~~~~~ 242 (252)
T PRK14272 235 FTNPRDER 242 (252)
T ss_pred HhCcCcHH
Confidence 87754444
No 278
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-38 Score=369.27 Aligned_cols=212 Identities=26% Similarity=0.417 Sum_probs=183.5
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCC--CCChHHhhhce
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDIT--KIGLHDLRSRL 1339 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~--~i~l~~LR~~i 1339 (1513)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. +.+...+|+++
T Consensus 2 l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i 79 (271)
T PRK13638 2 LATSDLWFRYQD--EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQV 79 (271)
T ss_pred eEEEEEEEEcCC--cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhhe
Confidence 789999999964 35999999999999999999999999999999999999999999999999985 34456788999
Q ss_pred EEEcCCCc--cccCcHhhccCCC---CCCCH----HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHH
Q 000432 1340 GIIPQDPT--LFDGTVRGNLDPL---VQYSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLG 1410 (1513)
Q Consensus 1340 siVpQdp~--LF~gTIR~NLdp~---~~~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LA 1410 (1513)
+++||+|. +|..|+.+|+... ...++ +++.++++..++.++. +. ...+||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~----~~~~LSgG~~qrl~la 148 (271)
T PRK13638 80 ATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFR-------HQ----PIQCLSHGQKKRVAIA 148 (271)
T ss_pred EEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHh-------cC----CchhCCHHHHHHHHHH
Confidence 99999985 6778999998642 11222 3456678888876543 22 3457999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1411 RTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1411 RALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
|||+.+|+||||||||++||+.+...+.+.|++.. +++|+|+|+|+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 149 raL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 149 GALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999999999998764 47899999999999965 999999999999999999998765
No 279
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=6.7e-39 Score=358.47 Aligned_cols=197 Identities=29% Similarity=0.434 Sum_probs=170.4
Q ss_pred EEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEE
Q 000432 1263 SFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGII 1342 (1513)
Q Consensus 1263 ~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiV 1342 (1513)
+++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++. .+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~v 73 (213)
T cd03235 1 EVEDLTVSYGG--HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGYV 73 (213)
T ss_pred CcccceeEECC--EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEEe
Confidence 46899999964 35999999999999999999999999999999999999999999999998874 578899999
Q ss_pred cCCCcc---ccCcHhhccCCCCC-----------CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHH
Q 000432 1343 PQDPTL---FDGTVRGNLDPLVQ-----------YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFC 1408 (1513)
Q Consensus 1343 pQdp~L---F~gTIR~NLdp~~~-----------~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~ 1408 (1513)
||+|.+ |+.|+++|+..... ..++++.++++..++.++..+ ...+||||||||++
T Consensus 74 ~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~ 142 (213)
T cd03235 74 PQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADR-----------QIGELSGGQQQRVL 142 (213)
T ss_pred ccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhC-----------CcccCCHHHHHHHH
Confidence 999986 66899999963211 123567888888888665433 23579999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEec
Q 000432 1409 LGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1409 LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~G 1478 (1513)
|||||+++|++|||||||++||+++...+.+.|++.. +++|+|+|+|+++.+.. ||+|++|++| +++.|
T Consensus 143 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 143 LARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 9999999999999999999999999999999998764 57899999999999976 8999999986 55554
No 280
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.4e-38 Score=357.41 Aligned_cols=208 Identities=25% Similarity=0.368 Sum_probs=184.0
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++||+++|++. ..|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+. .+++++|
T Consensus 2 l~~~~l~~~~~~~----~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~ 75 (232)
T PRK10771 2 LKLTDITWLYHHL----PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVSM 75 (232)
T ss_pred eEEEEEEEEECCc----cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEEE
Confidence 7899999999642 249999999999999999999999999999999999999999999999987654 3678999
Q ss_pred EcCCCccccC-cHhhccCCC-C-C-----CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1342 IPQDPTLFDG-TVRGNLDPL-V-Q-----YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1342 VpQdp~LF~g-TIR~NLdp~-~-~-----~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+||+|.+|.+ |+++|+... . . ..++++.++++..++.+.+.+.| ..||||||||++||||+
T Consensus 76 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrv~laral 144 (232)
T PRK10771 76 LFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----------GQLSGGQRQRVALARCL 144 (232)
T ss_pred EecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999986 999999732 1 1 12456888999999877766554 36999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
+++|++|||||||++||.++.+.+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|+++++...
T Consensus 145 ~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 145 VREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999988653 7899999999999876 999999999999999999999865
No 281
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-38 Score=363.20 Aligned_cols=221 Identities=23% Similarity=0.385 Sum_probs=189.1
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC--C---CCcEEEEcCeeCCC--CChH
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE--P---TMGSIIIDNVDITK--IGLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e--p---~~G~I~IDGvdI~~--i~l~ 1333 (1513)
.|+++||+++|+. .++|+|+||+|++||.+||+|++|||||||+++|.|+++ | ++|+|.+||.++.. .+..
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 82 (252)
T PRK14255 5 IITSSDVHLFYGK--FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDVV 82 (252)
T ss_pred eEEEEeEEEEECC--eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccHH
Confidence 4899999999974 359999999999999999999999999999999999975 4 59999999999864 3455
Q ss_pred HhhhceEEEcCCCccccCcHhhccCCC---CCC-----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1334 DLRSRLGIIPQDPTLFDGTVRGNLDPL---VQY-----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~gTIR~NLdp~---~~~-----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
.+|++++++||+|.+|..|+++|+... ... .++++.++++.+++.+.+. ........+||+||||
T Consensus 83 ~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LS~Gq~q 155 (252)
T PRK14255 83 QLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVK-------DHLHESALSLSGGQQQ 155 (252)
T ss_pred HhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchh-------hHHhcCcccCCHHHHH
Confidence 678899999999999999999999631 111 1345677788887754332 2234455789999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
|++||||++++|+||||||||++||.++.+.+.+.|++..+++|+|+|+|+++.+.. ||+|++|++|++++.|++.+..
T Consensus 156 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14255 156 RVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQMF 235 (252)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988667899999999999876 9999999999999999999998
Q ss_pred hcCChH
Q 000432 1485 EREDSF 1490 (1513)
Q Consensus 1485 ~~~~~~ 1490 (1513)
.++...
T Consensus 236 ~~~~~~ 241 (252)
T PRK14255 236 LNPKEK 241 (252)
T ss_pred cCCCCh
Confidence 765443
No 282
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.7e-38 Score=378.84 Aligned_cols=205 Identities=21% Similarity=0.316 Sum_probs=178.1
Q ss_pred cceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCe----eCCCCChHHhh----hceEEEcCCCcc
Q 000432 1277 SVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNV----DITKIGLHDLR----SRLGIIPQDPTL 1348 (1513)
Q Consensus 1277 ~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGv----dI~~i~l~~LR----~~isiVpQdp~L 1348 (1513)
.+|+|+||+|++||.++|+|+||||||||+++|.|+++|++|+|++||. |+...+.+.+| ++++||||++.+
T Consensus 38 ~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~l 117 (382)
T TIGR03415 38 VGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFAL 117 (382)
T ss_pred EEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCcC
Confidence 4899999999999999999999999999999999999999999999996 77777665553 589999999999
Q ss_pred cc-CcHhhccCCC---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEE
Q 000432 1349 FD-GTVRGNLDPL---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSIL 1420 (1513)
Q Consensus 1349 F~-gTIR~NLdp~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~IL 1420 (1513)
|+ .|+++|+... ...+ .+++.++++.+++.++....| .+||||||||++|||||+++|+||
T Consensus 118 ~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~-----------~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 118 MPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKP-----------GELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred CCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----------hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 97 6999999632 1122 245678899999877654433 369999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCChHHH
Q 000432 1421 VLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLEREDSFFS 1492 (1513)
Q Consensus 1421 iLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~ 1492 (1513)
+||||||+||+.+...+++.|++..+ ++|+|+|||+++.+.. ||||++|++|++++.|++++++.++...|.
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~p~~~~~ 261 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLNPANDYV 261 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhCcchHHH
Confidence 99999999999999999999988653 7899999999999855 999999999999999999999877544333
No 283
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.4e-38 Score=351.79 Aligned_cols=199 Identities=35% Similarity=0.580 Sum_probs=168.4
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC----------eEEEE
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG----------TKAYV 700 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g----------~~ayv 700 (1513)
.|+++|++|+|+.+ ++|+||||++++|++++|+||||||||||+++|+|+++|.+|+|.+.| ++|||
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~~~~IgYV 80 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRKRLRIGYV 80 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEccccccccccCCeEEEc
Confidence 59999999999742 699999999999999999999999999999999999999999999876 48999
Q ss_pred cCCC---cccCccHHHHHccCCCCC-----------chHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHH
Q 000432 701 PQSP---WILTGNIRENILFGNQYD-----------SCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQ 766 (1513)
Q Consensus 701 ~Q~~---~l~~~ti~eNI~fg~~~~-----------~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~ 766 (1513)
||.. |-|..||+|-+.+|.... .++.+++++..++. |+. +..|| .|||||+|||-
T Consensus 81 PQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~-~~~------~r~i~----~LSGGQ~QRV~ 149 (254)
T COG1121 81 PQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGME-DLR------DRQIG----ELSGGQKQRVL 149 (254)
T ss_pred CcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCch-hhh------CCccc----ccCcHHHHHHH
Confidence 9964 889999999999985322 24455555555554 222 12344 59999999999
Q ss_pred HHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHHHHh
Q 000432 767 IARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEELLK 844 (1513)
Q Consensus 767 lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~l~~ 844 (1513)
|||||.++||+|+|||||+++|+.++..++ +++..+. +|+||++|||+++.+. .+|+|+.| |+++...|++++..+
T Consensus 150 lARAL~~~p~lllLDEP~~gvD~~~~~~i~-~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~~~ 227 (254)
T COG1121 150 LARALAQNPDLLLLDEPFTGVDVAGQKEIY-DLLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEVLT 227 (254)
T ss_pred HHHHhccCCCEEEecCCcccCCHHHHHHHH-HHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhccC
Confidence 999999999999999999999999988876 4666654 3899999999999865 59999999 677889999999875
Q ss_pred c
Q 000432 845 Q 845 (1513)
Q Consensus 845 ~ 845 (1513)
.
T Consensus 228 ~ 228 (254)
T COG1121 228 E 228 (254)
T ss_pred H
Confidence 4
No 284
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-38 Score=364.33 Aligned_cols=213 Identities=22% Similarity=0.353 Sum_probs=182.5
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHh-hhce
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDL-RSRL 1339 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~L-R~~i 1339 (1513)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+. |..+
T Consensus 5 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 82 (255)
T PRK11300 5 LLSVSGLMMRFGG--LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGV 82 (255)
T ss_pred eEEEeeEEEEECC--EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCe
Confidence 5999999999964 359999999999999999999999999999999999999999999999999998877665 4569
Q ss_pred EEEcCCCccccC-cHhhccCCCCC----------------C--C----HHHHHHHHHHcCCcHHHHhhhccccchhccCC
Q 000432 1340 GIIPQDPTLFDG-TVRGNLDPLVQ----------------Y--S----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENG 1396 (1513)
Q Consensus 1340 siVpQdp~LF~g-TIR~NLdp~~~----------------~--s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G 1396 (1513)
+++||+|.+|.+ |+++|+..... . . .+++.++++..++. .......
T Consensus 83 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~ 151 (255)
T PRK11300 83 VRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLL-----------EHANRQA 151 (255)
T ss_pred EEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChh-----------hhhhCCh
Confidence 999999999986 99999974210 0 0 12344445555443 3334455
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCE
Q 000432 1397 ENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGR 1473 (1513)
Q Consensus 1397 ~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~ 1473 (1513)
.+||||||||++||||++.+|+||||||||++||+++.+.+.+.|++..+ ++|||+++|+++.+.+ ||+|++|++|+
T Consensus 152 ~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~ 231 (255)
T PRK11300 152 GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGT 231 (255)
T ss_pred hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCe
Confidence 78999999999999999999999999999999999999999999987643 7899999999999976 99999999999
Q ss_pred EeEecChhHHHhc
Q 000432 1474 IAEYDSPTKLLER 1486 (1513)
Q Consensus 1474 IvE~Gtp~eLl~~ 1486 (1513)
+++.|+++++.++
T Consensus 232 i~~~~~~~~~~~~ 244 (255)
T PRK11300 232 PLANGTPEEIRNN 244 (255)
T ss_pred EEecCCHHHHhhC
Confidence 9999999998754
No 285
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.6e-38 Score=358.12 Aligned_cols=209 Identities=24% Similarity=0.348 Sum_probs=182.8
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++||+++|+. .++++|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+++...+|++++
T Consensus 7 ~i~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 84 (225)
T PRK10247 7 LLQLQNVGYLAGD--AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVS 84 (225)
T ss_pred eEEEeccEEeeCC--ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccE
Confidence 5999999999964 35999999999999999999999999999999999999999999999999999988888899999
Q ss_pred EEcCCCccccCcHhhccCCC----CC-CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHcc
Q 000432 1341 IIPQDPTLFDGTVRGNLDPL----VQ-YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLK 1415 (1513)
Q Consensus 1341 iVpQdp~LF~gTIR~NLdp~----~~-~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr 1415 (1513)
++||+|.+|+.|+++|+... .. ..++++.++++..++.+. .......+||+|||||++|||||++
T Consensus 85 ~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LS~G~~qrv~laral~~ 154 (225)
T PRK10247 85 YCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDT----------ILTKNIAELSGGEKQRISLIRNLQF 154 (225)
T ss_pred EEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCChH----------HhcCCcccCCHHHHHHHHHHHHHhc
Confidence 99999999999999999631 11 123456677777777431 1233456899999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEe-CCEEeEecChh
Q 000432 1416 KSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVIDSDLVLVLS-DGRIAEYDSPT 1481 (1513)
Q Consensus 1416 ~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~~DrIlVLd-~G~IvE~Gtp~ 1481 (1513)
+|+++||||||++||+.+.+.+.+.|++..+ ++|+|+|+|+++.+..||+|++|+ ++..++.|+|+
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 155 MPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999999999988653 789999999999998999999995 66777888885
No 286
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=3.1e-38 Score=355.39 Aligned_cols=203 Identities=30% Similarity=0.393 Sum_probs=175.7
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHH---hhhc
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHD---LRSR 1338 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~---LR~~ 1338 (1513)
|+++|++++|+++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+++.+. +|++
T Consensus 2 l~~~~l~~~~~~~-~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~ 80 (222)
T PRK10908 2 IRFEHVSKAYLGG-RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRRQ 80 (222)
T ss_pred EEEEeeEEEecCC-CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHhh
Confidence 7899999999533 35999999999999999999999999999999999999999999999999998876544 6889
Q ss_pred eEEEcCCCcc-ccCcHhhccCCC---CCCCH----HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHH
Q 000432 1339 LGIIPQDPTL-FDGTVRGNLDPL---VQYSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLG 1410 (1513)
Q Consensus 1339 isiVpQdp~L-F~gTIR~NLdp~---~~~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LA 1410 (1513)
++|+||+|.+ +..|+++|+... ...++ +++.++++..++.+...+ ...+||||||||++||
T Consensus 81 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la 149 (222)
T PRK10908 81 IGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKN-----------FPIQLSGGEQQRVGIA 149 (222)
T ss_pred eEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhC-----------CchhCCHHHHHHHHHH
Confidence 9999999987 467999999642 12233 245677888877665433 2357999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeE
Q 000432 1411 RTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAE 1476 (1513)
Q Consensus 1411 RALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE 1476 (1513)
||++++|++|+|||||++||+++.+.+.+.|++.. +++|+|+|+|+++.+.. ||+|++|++|+++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 150 RAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 99999999999999999999999999999998764 47899999999999987 89999999999864
No 287
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3e-38 Score=374.58 Aligned_cols=228 Identities=21% Similarity=0.353 Sum_probs=189.9
Q ss_pred eEEEEEEEEEEcC--CCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC----CCCcEEEEcCeeCCCCChHH
Q 000432 1261 TISFHNLQIRYAE--HLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE----PTMGSIIIDNVDITKIGLHD 1334 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~--~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e----p~~G~I~IDGvdI~~i~l~~ 1334 (1513)
-|+++|++++|+. +...+|+||||+|++||.+||||+||||||||+++|.|+.+ |++|+|.+||.|+.+++.++
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 4899999999953 22359999999999999999999999999999999999986 58999999999999988776
Q ss_pred hh----hceEEEcCCCcc--c-cCcHhhccCC-C------CC------CCHHHHHHHHHHcCCcHHHHhhhccccchhcc
Q 000432 1335 LR----SRLGIIPQDPTL--F-DGTVRGNLDP-L------VQ------YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAE 1394 (1513)
Q Consensus 1335 LR----~~isiVpQdp~L--F-~gTIR~NLdp-~------~~------~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e 1394 (1513)
++ ++|++|||+|.. + .-||.+|+.. . +. ..++++.++|+.+++.+.-. -+ ..
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~----~~----~~ 154 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKD----AM----RS 154 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHH----HH----hC
Confidence 54 479999999963 3 3488888741 0 10 11346788999999874311 11 22
Q ss_pred CCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeC
Q 000432 1395 NGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSD 1471 (1513)
Q Consensus 1395 ~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~ 1471 (1513)
....||||||||++|||||+.+|+|||+||||++||..+...|.+.|++..+ +.|+|+|||+++.+.. ||||+||++
T Consensus 155 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 155 FPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred CchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 2357999999999999999999999999999999999999999999998653 7899999999999976 999999999
Q ss_pred CEEeEecChhHHHhcCChHHHH-HHH
Q 000432 1472 GRIAEYDSPTKLLEREDSFFSQ-LIK 1496 (1513)
Q Consensus 1472 G~IvE~Gtp~eLl~~~~~~f~~-l~~ 1496 (1513)
|+|+|.|+++++.+++...|.+ +.+
T Consensus 235 G~ive~g~~~~i~~~p~~~y~~~ll~ 260 (330)
T PRK15093 235 GQTVETAPSKELVTTPHHPYTQALIR 260 (330)
T ss_pred CEEEEECCHHHHHhCCCCHHHHHHHH
Confidence 9999999999998876556654 444
No 288
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=4.5e-38 Score=361.62 Aligned_cols=223 Identities=27% Similarity=0.401 Sum_probs=197.0
Q ss_pred cceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe------------
Q 000432 629 EFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------ 696 (1513)
Q Consensus 629 ~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------ 696 (1513)
...|+++|++++|+.. ..++|+|+||+|++|++++|+|+||||||||+++|+|+++|.+|+|.++|.
T Consensus 17 ~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~ 95 (257)
T cd03288 17 GGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLRS 95 (257)
T ss_pred CceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHhh
Confidence 4579999999999642 357999999999999999999999999999999999999999999999872
Q ss_pred -EEEEcCCCcccCccHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCC
Q 000432 697 -KAYVPQSPWILTGNIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDA 775 (1513)
Q Consensus 697 -~ayv~Q~~~l~~~ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~ 775 (1513)
++||+|+|+++++|++||+........+++.+.++..++.+.++.+|.|.+|.+++.+.+||||||||++||||++++|
T Consensus 96 ~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~~p 175 (257)
T cd03288 96 RLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVRKS 175 (257)
T ss_pred hEEEECCCCcccccHHHHhcCcCCCCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 6999999999999999999866444445566777778888889999999999999999999999999999999999999
Q ss_pred CEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcC-ccHHHHH
Q 000432 776 DIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQN-IGFEVLV 853 (1513)
Q Consensus 776 ~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~-~~~~~l~ 853 (1513)
+++||||||++||+++.+.++ +.+..+.+++|+|++||+++.+..||+|++|++|++++.|+++++.+.. +.|.+++
T Consensus 176 ~llllDEPt~gLD~~~~~~l~-~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~~~~~~~~~ 253 (257)
T cd03288 176 SILIMDEATASIDMATENILQ-KVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQEDGVFASLV 253 (257)
T ss_pred CEEEEeCCccCCCHHHHHHHH-HHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhccchHHHHHH
Confidence 999999999999999876665 5666655689999999999998889999999999999999999997653 3455544
No 289
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1.8e-38 Score=373.13 Aligned_cols=212 Identities=24% Similarity=0.372 Sum_probs=183.3
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ....|++++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~ 80 (303)
T TIGR01288 4 AIDLVGVSKSYGD--KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIG 80 (303)
T ss_pred EEEEEeEEEEeCC--eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEE
Confidence 5899999999974 3599999999999999999999999999999999999999999999999998764 356789999
Q ss_pred EEcCCCcccc-CcHhhccCCC---CCCCHH----HHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHH
Q 000432 1341 IIPQDPTLFD-GTVRGNLDPL---VQYSDK----QVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRT 1412 (1513)
Q Consensus 1341 iVpQdp~LF~-gTIR~NLdp~---~~~sde----ei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARA 1412 (1513)
|+||++.+|. .|+++|+... ...+++ ++.++++.+++.+. +++.+ .+||||||||++||||
T Consensus 81 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~-------~~~~~----~~LSgG~~qrv~la~a 149 (303)
T TIGR01288 81 VVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESK-------ADVRV----ALLSGGMKRRLTLARA 149 (303)
T ss_pred EEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhH-------hcCch----hhCCHHHHHHHHHHHH
Confidence 9999999885 6999999632 123332 34456666666433 34443 4699999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1413 LLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1413 LLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
|+++|++|+|||||++||+++...+.+.|++.. +++|||+++|+++.+.+ ||+|++|++|++++.|+++++.+.
T Consensus 150 l~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 150 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999998864 47899999999999976 999999999999999999999764
No 290
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=2.1e-38 Score=364.42 Aligned_cols=211 Identities=24% Similarity=0.344 Sum_probs=185.8
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
++++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|++++|
T Consensus 2 l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (256)
T TIGR03873 2 LRLSRVSWSAGG--RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVAL 79 (256)
T ss_pred ceEEeEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheEE
Confidence 789999999964 359999999999999999999999999999999999999999999999999999888888889999
Q ss_pred EcCCCc-cccCcHhhccCCCC----C-------CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHH
Q 000432 1342 IPQDPT-LFDGTVRGNLDPLV----Q-------YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCL 1409 (1513)
Q Consensus 1342 VpQdp~-LF~gTIR~NLdp~~----~-------~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~L 1409 (1513)
+||++. .+..|+++|+.... . ..++++.++++.+++.+...+ ....||||||||++|
T Consensus 80 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~l 148 (256)
T TIGR03873 80 VEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADR-----------DMSTLSGGERQRVHV 148 (256)
T ss_pred ecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcC-----------CcccCCHHHHHHHHH
Confidence 999995 45689999996421 0 123457788888887554322 345799999999999
Q ss_pred HHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHh
Q 000432 1410 GRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1410 ARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
|||++.+|++++|||||++||+++...+.+.|++.. +++|+|+++|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 149 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 149 ARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 999999999999999999999999999999998764 37899999999999955 99999999999999999999865
No 291
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3e-38 Score=357.06 Aligned_cols=207 Identities=27% Similarity=0.390 Sum_probs=173.7
Q ss_pred EEEEEEEEEEcCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCh---HHhh
Q 000432 1262 ISFHNLQIRYAEHL--PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGL---HDLR 1336 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l---~~LR 1336 (1513)
|+++||+++|+... +++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.+.+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996431 259999999999999999999999999999999999999999999999999988774 5788
Q ss_pred hceEEEcCCC--ccc-cCcHhhccCC----CC-CCCHHHH----HHHHHHcCCcHHHHhhhccccchhccCCCCCChhHH
Q 000432 1337 SRLGIIPQDP--TLF-DGTVRGNLDP----LV-QYSDKQV----WEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQR 1404 (1513)
Q Consensus 1337 ~~isiVpQdp--~LF-~gTIR~NLdp----~~-~~sdeei----~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQR 1404 (1513)
++++|+||+| .++ ..|+++|+.. .. ...+++. .++++..++.+ ........+||||||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS~G~~ 151 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPE----------EVLNRYPHELSGGQR 151 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCCh----------hHhhCCchhcCHHHH
Confidence 9999999999 344 5799999852 11 1112211 24555555531 123344568999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEec
Q 000432 1405 QLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1405 Qrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~G 1478 (1513)
||++||||++++|+||+|||||++||+++...+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|
T Consensus 152 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 152 QRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999999988754 7899999999999884 9999999999998865
No 292
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-38 Score=361.56 Aligned_cols=225 Identities=26% Similarity=0.409 Sum_probs=190.9
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcC------eeCCCCChH
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDN------VDITKIGLH 1333 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDG------vdI~~i~l~ 1333 (1513)
..|+++|++++|+. +++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+|| .|+.+++..
T Consensus 9 ~~i~~~~~~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 9 DVFNISRLYLYIND--KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred hheeeeeEEEecCC--ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 35999999999964 3599999999999999999999999999999999999999996666554 777777888
Q ss_pred HhhhceEEEcCCCccccC-cHhhccCCC----CCCCH----HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHH
Q 000432 1334 DLRSRLGIIPQDPTLFDG-TVRGNLDPL----VQYSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQR 1404 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~g-TIR~NLdp~----~~~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQR 1404 (1513)
.+|++++|+||+|.+|.+ |+++|+... +...+ +.+.++++..++.+.+.. .....+..||+|||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~~~~LS~G~~ 159 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYD-------RLNSPASQLSGGQQ 159 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchh-------hhcCCcccCCHHHH
Confidence 899999999999999976 999999732 11122 235677787887654311 12335667999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHH
Q 000432 1405 QLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKL 1483 (1513)
Q Consensus 1405 Qrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eL 1483 (1513)
||++||||++++|++|+|||||++||..+...+.+.|++..+++|+|+++|+++.+.. ||++++|++|++++.|+++++
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~ 239 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEI 239 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999987778999999999999955 999999999999999999999
Q ss_pred HhcCChHHHH
Q 000432 1484 LEREDSFFSQ 1493 (1513)
Q Consensus 1484 l~~~~~~f~~ 1493 (1513)
.+++...|.+
T Consensus 240 ~~~~~~~~~~ 249 (257)
T PRK14246 240 FTSPKNELTE 249 (257)
T ss_pred HhCCCcHHHH
Confidence 8775544443
No 293
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-38 Score=359.26 Aligned_cols=213 Identities=27% Similarity=0.442 Sum_probs=182.3
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHH-hhhce
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHD-LRSRL 1339 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~-LR~~i 1339 (1513)
.|+++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 3 ~l~~~~l~~~~~~--~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 80 (241)
T PRK10895 3 TLTAKNLAKAYKG--RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGI 80 (241)
T ss_pred eEEEeCcEEEeCC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCe
Confidence 4889999999964 35999999999999999999999999999999999999999999999999998877654 57889
Q ss_pred EEEcCCCccccC-cHhhccCCCC----CCCH----HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHH
Q 000432 1340 GIIPQDPTLFDG-TVRGNLDPLV----QYSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLG 1410 (1513)
Q Consensus 1340 siVpQdp~LF~g-TIR~NLdp~~----~~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LA 1410 (1513)
+++||++.+|.+ |+++|+.... ..+. +.+.+.++..++. .........||||||||++||
T Consensus 81 ~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qrv~la 149 (241)
T PRK10895 81 GYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIE-----------HLRDSMGQSLSGGERRRVEIA 149 (241)
T ss_pred EEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCH-----------HHhhcchhhCCHHHHHHHHHH
Confidence 999999999875 9999997431 1222 2344455555443 333444568999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1411 RTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1411 RALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
||++++|++|+|||||++||+.+...+.+.+++.. +++|+|+++|+++.+.+ ||+|++|++|++++.|+++++++.
T Consensus 150 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 150 RALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 99999999999999999999999999999888754 47899999999987765 999999999999999999998764
No 294
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-39 Score=336.00 Aligned_cols=205 Identities=23% Similarity=0.402 Sum_probs=176.4
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCC-----cEEEECCe--------
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMA-----GTVKISGT-------- 696 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~-----G~i~~~g~-------- 696 (1513)
..++++|+++.|.. +.+|+|||++|++++++|++|||||||||||+++.+..+..+ |+|.++|.
T Consensus 6 ~~~~~~~l~~yYg~---~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d 82 (253)
T COG1117 6 PAIEVRDLNLYYGD---KHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVD 82 (253)
T ss_pred ceeEecceeEEECc---hhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCC
Confidence 46899999999973 579999999999999999999999999999999999988765 89999884
Q ss_pred -------EEEEcCCCcccCccHHHHHccCCCCC---ch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHH
Q 000432 697 -------KAYVPQSPWILTGNIRENILFGNQYD---SC----KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQK 762 (1513)
Q Consensus 697 -------~ayv~Q~~~l~~~ti~eNI~fg~~~~---~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQk 762 (1513)
+|+|+|.|--|..||.|||.||.... ++ ..++.++.++|.+.... .+.+.+..|||||+
T Consensus 83 ~~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQ 155 (253)
T COG1117 83 VVELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQ 155 (253)
T ss_pred HHHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHH
Confidence 49999999999999999999995421 12 24445555666554432 23456788999999
Q ss_pred HHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000432 763 QRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEE 841 (1513)
Q Consensus 763 qRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~ 841 (1513)
||++||||+.-+|+|+|||||||||||-+..+| ++.+..+.++-|+|+|||.++...+ +|+...+.+|+++|.|+.++
T Consensus 156 QRLcIARalAv~PeVlLmDEPtSALDPIsT~kI-EeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~ 234 (253)
T COG1117 156 QRLCIARALAVKPEVLLMDEPTSALDPISTLKI-EELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDK 234 (253)
T ss_pred HHHHHHHHHhcCCcEEEecCcccccCchhHHHH-HHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHh
Confidence 999999999999999999999999999998777 7788888888999999999988665 89999999999999999988
Q ss_pred HHhc
Q 000432 842 LLKQ 845 (1513)
Q Consensus 842 l~~~ 845 (1513)
+..+
T Consensus 235 iF~~ 238 (253)
T COG1117 235 IFTN 238 (253)
T ss_pred hhcC
Confidence 8754
No 295
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=2.5e-38 Score=353.69 Aligned_cols=201 Identities=25% Similarity=0.415 Sum_probs=177.1
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
++++||+++|+. +++|+||+|++||.+||+|++|||||||+++|+|+++|++|+|.+||.|+.+.+ .+|+++++
T Consensus 1 ~~~~~l~~~~~~----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~~ 74 (213)
T TIGR01277 1 LALDKVRYEYEH----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVSM 74 (213)
T ss_pred CeEEeeeEEeCC----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceEE
Confidence 368999999963 568999999999999999999999999999999999999999999999997643 46889999
Q ss_pred EcCCCccccC-cHhhccCC-CC-C-----CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1342 IPQDPTLFDG-TVRGNLDP-LV-Q-----YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1342 VpQdp~LF~g-TIR~NLdp-~~-~-----~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+||+|.+|.+ |+++|+.. .. . .+++++.++++..++.+...+.| .+||+|||||++||||+
T Consensus 75 v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~LS~G~~qrl~laral 143 (213)
T TIGR01277 75 LFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----------EQLSGGQRQRVALARCL 143 (213)
T ss_pred EeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----------ccCCHHHHHHHHHHHHH
Confidence 9999999975 99999963 11 1 13456788999999877665554 36999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecC
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDS 1479 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gt 1479 (1513)
+++|+|++|||||+++|.++...+.+.|++..+ ++|+|+|+|+++.+.+ ||+|++|++|++++.|.
T Consensus 144 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 144 VRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred hcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 999999999999999999999999999988653 7899999999999876 99999999999999874
No 296
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=5.3e-38 Score=361.46 Aligned_cols=221 Identities=20% Similarity=0.349 Sum_probs=183.6
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCee-----CCCCChHHh
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVD-----ITKIGLHDL 1335 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvd-----I~~i~l~~L 1335 (1513)
.|+++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.+ +.+.+...+
T Consensus 6 ~l~~~~l~~~~~~--~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~~ 83 (258)
T PRK11701 6 LLSVRGLTKLYGP--RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAER 83 (258)
T ss_pred eEEEeeeEEEcCC--ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHHH
Confidence 5999999999964 359999999999999999999999999999999999999999999999999 887766553
Q ss_pred ----hhceEEEcCCCc--ccc-CcHhhccCC----CCCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCC
Q 000432 1336 ----RSRLGIIPQDPT--LFD-GTVRGNLDP----LVQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWS 1400 (1513)
Q Consensus 1336 ----R~~isiVpQdp~--LF~-gTIR~NLdp----~~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLS 1400 (1513)
|+.++|+||+|. ++. .|+++|+.. ..... ++++.++++..++.+ +.....+.+||
T Consensus 84 ~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LS 153 (258)
T PRK11701 84 RRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDA----------ARIDDLPTTFS 153 (258)
T ss_pred HHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCCh----------hHHhCCCccCC
Confidence 567999999984 343 478888742 11111 233445555555431 23445667899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEe
Q 000432 1401 VGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEY 1477 (1513)
Q Consensus 1401 gGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~ 1477 (1513)
||||||++||||++++|+||+|||||++||+++.+.+.+.|++..+ +.|+|+|+|+++.+.+ ||+|++|++|++++.
T Consensus 154 ~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~ 233 (258)
T PRK11701 154 GGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVES 233 (258)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999987643 7899999999999985 999999999999999
Q ss_pred cChhHHHhcCChHHHH
Q 000432 1478 DSPTKLLEREDSFFSQ 1493 (1513)
Q Consensus 1478 Gtp~eLl~~~~~~f~~ 1493 (1513)
|+++++..++...|.+
T Consensus 234 ~~~~~~~~~~~~~~~~ 249 (258)
T PRK11701 234 GLTDQVLDDPQHPYTQ 249 (258)
T ss_pred CCHHHHhcCCCCHHHH
Confidence 9999998765444543
No 297
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.6e-38 Score=355.42 Aligned_cols=200 Identities=31% Similarity=0.476 Sum_probs=172.7
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCC--CChHHhhhce
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITK--IGLHDLRSRL 1339 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~--i~l~~LR~~i 1339 (1513)
|+++||+++|+. .++|+|+||++++||++||+|++|||||||+++|.|+++|++|+|.+||.++.. .+...+|+++
T Consensus 1 l~~~~l~~~~~~--~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (213)
T cd03262 1 IEIKNLHKSFGD--FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQKV 78 (213)
T ss_pred CEEEEEEEEECC--eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhcc
Confidence 578999999965 359999999999999999999999999999999999999999999999999853 4556788999
Q ss_pred EEEcCCCcccc-CcHhhccCCC----CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHH
Q 000432 1340 GIIPQDPTLFD-GTVRGNLDPL----VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLG 1410 (1513)
Q Consensus 1340 siVpQdp~LF~-gTIR~NLdp~----~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LA 1410 (1513)
+|+||+|.+|. .|+++|+... ...+ ++++.++++..++.+...+ ...+||||||||++||
T Consensus 79 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~la 147 (213)
T cd03262 79 GMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADA-----------YPAQLSGGQQQRVAIA 147 (213)
T ss_pred eEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhh-----------CccccCHHHHHHHHHH
Confidence 99999999986 6999999642 1222 2345667777776554333 2357999999999999
Q ss_pred HHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEE
Q 000432 1411 RTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRI 1474 (1513)
Q Consensus 1411 RALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~I 1474 (1513)
||++++|++|||||||++||+++.+.+.+.|++.. .++|+|+++|+++.+.+ ||+|++|++|++
T Consensus 148 ~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 148 RALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred HHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999998764 47899999999999976 999999999975
No 298
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=7.3e-38 Score=359.37 Aligned_cols=223 Identities=22% Similarity=0.317 Sum_probs=187.1
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC----CCcEEEEcCeeCCCCChHHhh
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP----TMGSIIIDNVDITKIGLHDLR 1336 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep----~~G~I~IDGvdI~~i~l~~LR 1336 (1513)
.|+++|++++| + .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.+++.. +..+
T Consensus 4 ~l~~~~l~~~~-~--~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~~ 78 (254)
T PRK10418 4 QIELRNIALQA-A--QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALRG 78 (254)
T ss_pred EEEEeCeEEEe-c--cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--cccc
Confidence 58999999999 2 3599999999999999999999999999999999999999 999999999998632 2234
Q ss_pred hceEEEcCCCc-ccc--CcHhhccCC----C-CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHH
Q 000432 1337 SRLGIIPQDPT-LFD--GTVRGNLDP----L-VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFC 1408 (1513)
Q Consensus 1337 ~~isiVpQdp~-LF~--gTIR~NLdp----~-~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~ 1408 (1513)
++++|+||+|. .|. .|+.+|+.. . ....+++++++++.+++.+. ++.+......||||||||++
T Consensus 79 ~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv~ 150 (254)
T PRK10418 79 RKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRMM 150 (254)
T ss_pred ceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHHH
Confidence 67999999985 443 477777531 1 12345678999999988653 12334456789999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHh
Q 000432 1409 LGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1409 LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
|||||+++|+||||||||++||..+.+.+.+.|++..+ ++|||+++|+++.+.+ ||+|++|++|++++.|+++++.+
T Consensus 151 laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 230 (254)
T PRK10418 151 IALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLFN 230 (254)
T ss_pred HHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHhh
Confidence 99999999999999999999999999999999988653 7899999999999875 99999999999999999999987
Q ss_pred cCCh-HHHHHHH
Q 000432 1486 REDS-FFSQLIK 1496 (1513)
Q Consensus 1486 ~~~~-~f~~l~~ 1496 (1513)
++.. .++.++.
T Consensus 231 ~~~~~~~~~~~~ 242 (254)
T PRK10418 231 APKHAVTRSLVS 242 (254)
T ss_pred CCCCHHHHHHHH
Confidence 6544 4444543
No 299
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=3e-38 Score=374.31 Aligned_cols=212 Identities=26% Similarity=0.411 Sum_probs=184.7
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++||+++|++. .+|+||||+|++||.+||+||+|||||||+++|.|+++|++|+|.+||.|+.+.+ ...|++++
T Consensus 41 ~i~i~nl~k~y~~~--~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig 117 (340)
T PRK13536 41 AIDLAGVSKSYGDK--AVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIG 117 (340)
T ss_pred eEEEEEEEEEECCE--EEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEE
Confidence 59999999999743 5999999999999999999999999999999999999999999999999998654 56889999
Q ss_pred EEcCCCccc-cCcHhhccCCCC---CCCH----HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHH
Q 000432 1341 IIPQDPTLF-DGTVRGNLDPLV---QYSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRT 1412 (1513)
Q Consensus 1341 iVpQdp~LF-~gTIR~NLdp~~---~~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARA 1412 (1513)
|+||++.+| ..|+++|+..+. ..+. +.+.++++.+++.+ ..++.+ .+||+|||||++||||
T Consensus 118 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~-------~~~~~~----~~LS~G~kqrv~lA~a 186 (340)
T PRK13536 118 VVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLES-------KADARV----SDLSGGMKRRLTLARA 186 (340)
T ss_pred EEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-------hhCCCh----hhCCHHHHHHHHHHHH
Confidence 999999987 569999996421 1222 23455666666644 344444 4699999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1413 LLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1413 LLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
|+.+|++|||||||++||+.+...+.+.|++.. +++|||+++|+++.+.+ ||+|++|++|++++.|+++++.++
T Consensus 187 L~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 187 LINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred HhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999998864 47999999999999976 999999999999999999999764
No 300
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.4e-38 Score=337.40 Aligned_cols=204 Identities=30% Similarity=0.459 Sum_probs=176.7
Q ss_pred cceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe------------
Q 000432 629 EFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------ 696 (1513)
Q Consensus 629 ~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------ 696 (1513)
...|++++++++|. ++.+++|+||+|++||.++|+|+|||||||||++|+|+.+|++|+|.++|.
T Consensus 6 ~~~I~vr~v~~~fG---~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ 82 (263)
T COG1127 6 EPLIEVRGVTKSFG---DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYE 82 (263)
T ss_pred cceEEEeeeeeecC---CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHH
Confidence 45799999999996 468999999999999999999999999999999999999999999999983
Q ss_pred ----EEEEcCCCcccCc-cHHHHHccCC----CCCchHHHH----HHHHHhcHHH-HhhccCCCCccccCCCCCCChHHH
Q 000432 697 ----KAYVPQSPWILTG-NIRENILFGN----QYDSCKYDR----TVEACALVKD-FELFASGDLTEIGERGINMSGGQK 762 (1513)
Q Consensus 697 ----~ayv~Q~~~l~~~-ti~eNI~fg~----~~~~~~~~~----v~~~~~l~~d-~~~l~~Gd~T~Ige~g~~LSGGQk 762 (1513)
+|+++|+.-||+. ||+||+.|.. ..+++.+++ -+++++|..+ .+.+| ..||||++
T Consensus 83 ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~~~~~P-----------sELSGGM~ 151 (263)
T COG1127 83 IRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAAADLYP-----------SELSGGMR 151 (263)
T ss_pred HHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhhhhhCc-----------hhhcchHH
Confidence 5999999999976 9999999952 344444443 3466677666 55555 57999999
Q ss_pred HHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCcccc-CCEEEEEeCCeEEEecCh
Q 000432 763 QRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILK--DKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRF 839 (1513)
Q Consensus 763 qRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~--~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~ 839 (1513)
.|++||||+..||+|+++|||||+|||.++. .|.++|+.+.+ +-|+|+|||+++.+.. ||+|+++.||+|+..|++
T Consensus 152 KRvaLARAialdPell~~DEPtsGLDPI~a~-~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~ 230 (263)
T COG1127 152 KRVALARAIALDPELLFLDEPTSGLDPISAG-VIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTP 230 (263)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCcchHH-HHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCH
Confidence 9999999999999999999999999999855 55778876543 7899999999988655 899999999999999999
Q ss_pred HHHHhcCc
Q 000432 840 EELLKQNI 847 (1513)
Q Consensus 840 ~~l~~~~~ 847 (1513)
+|+.+.+.
T Consensus 231 ~el~~sd~ 238 (263)
T COG1127 231 EELLASDD 238 (263)
T ss_pred HHHHhCCC
Confidence 99988654
No 301
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=2e-38 Score=352.73 Aligned_cols=200 Identities=32% Similarity=0.523 Sum_probs=168.2
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC-------------eE
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG-------------TK 697 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g-------------~~ 697 (1513)
.++++|++|+|+ ++++|+|+||++++|++++|+|||||||||||++|.|.++|.+|+|.++| .+
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 378999999997 36899999999999999999999999999999999999999999999999 46
Q ss_pred EEEcCCCcc-cCccHHHHHccCCC-----C---Cch---HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHH
Q 000432 698 AYVPQSPWI-LTGNIRENILFGNQ-----Y---DSC---KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRI 765 (1513)
Q Consensus 698 ayv~Q~~~l-~~~ti~eNI~fg~~-----~---~~~---~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi 765 (1513)
|||||++.. +.-||+|-+.+|+. + .++ ..+++++.+++.+..+ ..-..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~-----------r~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLAD-----------RPVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhc-----------CcccccChhHHHHH
Confidence 999999754 45699999999962 1 122 2334455555443221 12346999999999
Q ss_pred HHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCc-cccCCEEEEEeCCeEEEecChHHH
Q 000432 766 QIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEF-LPAADIILVMENGRIAQAGRFEEL 842 (1513)
Q Consensus 766 ~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~-l~~~d~i~vl~~G~i~~~g~~~~l 842 (1513)
.|||||.++|+|+|||||||+||....-++++ .++.+. +|+|+|+|+|+++. +..||++++|++|+++.+|+++|.
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~-ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~ev 226 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLE-LLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEV 226 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchh
Confidence 99999999999999999999999999988886 454443 48999999999988 567999999999999999999998
Q ss_pred Hhc
Q 000432 843 LKQ 845 (1513)
Q Consensus 843 ~~~ 845 (1513)
+..
T Consensus 227 lT~ 229 (258)
T COG1120 227 LTE 229 (258)
T ss_pred cCH
Confidence 754
No 302
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=4.2e-38 Score=369.38 Aligned_cols=211 Identities=24% Similarity=0.367 Sum_probs=187.1
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
++++|++++|++ ..+|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+ ....+|++++|
T Consensus 3 l~~~~l~~~~~~--~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~ 79 (301)
T TIGR03522 3 IRVSSLTKLYGT--QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGY 79 (301)
T ss_pred EEEEEEEEEECC--EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEE
Confidence 789999999964 359999999999999999999999999999999999999999999999999987 44678999999
Q ss_pred EcCCCccccC-cHhhccCCCC---CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1342 IPQDPTLFDG-TVRGNLDPLV---QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1342 VpQdp~LF~g-TIR~NLdp~~---~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+||+|.+|.+ |++|||.... ..+ .+++.++++..++.+... ....+||+|||||++|||||
T Consensus 80 ~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~-----------~~~~~LS~G~~qrv~la~al 148 (301)
T TIGR03522 80 LPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQH-----------KKIGQLSKGYRQRVGLAQAL 148 (301)
T ss_pred ecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhc-----------CchhhCCHHHHHHHHHHHHH
Confidence 9999999976 9999996321 122 345677777777765432 23457999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
+++|++|+|||||++||+++.+.+.+.|++..+++|+|+++|+++.+.. ||||++|++|++++.|+++++.++
T Consensus 149 ~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 149 IHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999988778999999999999887 999999999999999999998764
No 303
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=6.7e-38 Score=356.48 Aligned_cols=219 Identities=30% Similarity=0.508 Sum_probs=190.7
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC-------------eEE
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG-------------TKA 698 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g-------------~~a 698 (1513)
++++|+++.|+.....++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++| .++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 4688999999643335799999999999999999999999999999999999999999999988 279
Q ss_pred EEcCCCcccCccHHHHHccCCCC-CchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000432 699 YVPQSPWILTGNIRENILFGNQY-DSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDADI 777 (1513)
Q Consensus 699 yv~Q~~~l~~~ti~eNI~fg~~~-~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~i 777 (1513)
|++|++++++.|++||+.++... ..++..+.++.+++.+.++.+|.|.++..+....+||||||||++||||++.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987543 33445556666777777888999999999999999999999999999999999999
Q ss_pred EEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHHH
Q 000432 778 YLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQNIGFEV 851 (1513)
Q Consensus 778 llLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~ 851 (1513)
+||||||++||+++.+.+.+ .+..+.+++|+|++||+++.++.||+|++|++|++++.|+.+++.+.......
T Consensus 161 lllDEP~~gLD~~~~~~l~~-~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~~ 233 (238)
T cd03249 161 LLLDEATSALDAESEKLVQE-ALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQKGVYAK 233 (238)
T ss_pred EEEeCccccCCHHHHHHHHH-HHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhcChhHHH
Confidence 99999999999999877764 56555578999999999999888999999999999999999888765544433
No 304
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-38 Score=352.95 Aligned_cols=200 Identities=25% Similarity=0.442 Sum_probs=173.0
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.. ..|++++|
T Consensus 1 l~~~~l~~~~~~--~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~~ 74 (210)
T cd03269 1 LEVENVTKRFGR--VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIGY 74 (210)
T ss_pred CEEEEEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEEE
Confidence 578999999964 359999999999999999999999999999999999999999999999998753 56789999
Q ss_pred EcCCCccccC-cHhhccCCCC---CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1342 IPQDPTLFDG-TVRGNLDPLV---QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1342 VpQdp~LF~g-TIR~NLdp~~---~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+||++.+|.+ |+++|+.... ..+ ++++.++++..++.+... ....+||||||||++||||+
T Consensus 75 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~la~al 143 (210)
T cd03269 75 LPEERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLELSEYAN-----------KRVEELSKGNQQKVQFIAAV 143 (210)
T ss_pred eccCCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHh-----------CcHhhCCHHHHHHHHHHHHH
Confidence 9999999975 9999985321 111 345666777777654432 23457999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEec
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~G 1478 (1513)
+++|++|+|||||++||+++.+.+.+.|++.. +++|+|+|+|+++.+.. ||+|++|++|++++.|
T Consensus 144 ~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 144 IHDPELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred hcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999999998764 47899999999999876 9999999999999865
No 305
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.1e-38 Score=354.96 Aligned_cols=217 Identities=32% Similarity=0.508 Sum_probs=191.8
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------EE
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------KA 698 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~a 698 (1513)
|+++|++++|+.. ..++++|+||++++|++++|+|+||||||||+++|.|+++|++|+|.++|. ++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 4689999999642 247999999999999999999999999999999999999999999999872 69
Q ss_pred EEcCCCcccCccHHHHHccCCC-CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000432 699 YVPQSPWILTGNIRENILFGNQ-YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDADI 777 (1513)
Q Consensus 699 yv~Q~~~l~~~ti~eNI~fg~~-~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~i 777 (1513)
|++|++++++.|++||+.++.+ ...+.+.+..+.+.+.+.++.+|.|.++..+.+..+||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999998754 334455666677778888899999999999999999999999999999999999999
Q ss_pred EEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHH
Q 000432 778 YLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQNIGFE 850 (1513)
Q Consensus 778 llLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~ 850 (1513)
+||||||++||+.+.+.+. +.+..+.+++|+|++||+++.++.||+|++|++|++++.|+.+++.+..+.|.
T Consensus 160 llLDEP~~~LD~~~~~~l~-~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~~~~~ 231 (234)
T cd03251 160 LILDEATSALDTESERLVQ-AALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQGGVYA 231 (234)
T ss_pred EEEeCccccCCHHHHHHHH-HHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHcCcchh
Confidence 9999999999999977775 56766667899999999999988899999999999999999999876654443
No 306
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.5e-38 Score=354.03 Aligned_cols=212 Identities=30% Similarity=0.504 Sum_probs=189.7
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC-------------eE
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG-------------TK 697 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g-------------~~ 697 (1513)
.++++|++++|+. .+++++|+||++++|++++|+||||||||||+++|+|+.+|.+|+|.++| .+
T Consensus 2 ~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 79 (229)
T cd03254 2 EIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMI 79 (229)
T ss_pred eEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhE
Confidence 4889999999963 24699999999999999999999999999999999999999999999987 26
Q ss_pred EEEcCCCcccCccHHHHHccCCCC-CchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCC
Q 000432 698 AYVPQSPWILTGNIRENILFGNQY-DSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDAD 776 (1513)
Q Consensus 698 ayv~Q~~~l~~~ti~eNI~fg~~~-~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~ 776 (1513)
+|++|+++++.+|++||+.++.+. ..++..+.++.+++.+.++.+|.|.++..+....+|||||||||+||||++++|+
T Consensus 80 ~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ 159 (229)
T cd03254 80 GVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPK 159 (229)
T ss_pred EEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCC
Confidence 999999999999999999987643 3345566677778888889999999999999999999999999999999999999
Q ss_pred EEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000432 777 IYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 777 illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
++||||||++||+.+.+.+. +.+..+.+++|+|++||+++.++.||+|++|++|++++.|+.+++.++
T Consensus 160 llllDEP~~~LD~~~~~~l~-~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 160 ILILDEATSNIDTETEKLIQ-EALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred EEEEeCccccCCHHHHHHHH-HHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 99999999999999987775 456666568999999999999888999999999999999998887654
No 307
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.6e-38 Score=355.21 Aligned_cols=218 Identities=32% Similarity=0.542 Sum_probs=191.7
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------EE
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------KA 698 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~a 698 (1513)
++++|++++|+. .+++|+|+||+|++|++++|+|+||||||||+++|+|+.+|++|+|.++|. ++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 468899999963 246999999999999999999999999999999999999999999999883 69
Q ss_pred EEcCCCcccCccHHHHHccCCCC-CchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000432 699 YVPQSPWILTGNIRENILFGNQY-DSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDADI 777 (1513)
Q Consensus 699 yv~Q~~~l~~~ti~eNI~fg~~~-~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~i 777 (1513)
|++|++++++.|++||+.++.+. ..+...+.++.+.+.+.++.+|.|.+|.+..+..+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987542 33344566677788888899999999999999999999999999999999999999
Q ss_pred EEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhcCccHHHH
Q 000432 778 YLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQNIGFEVL 852 (1513)
Q Consensus 778 llLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~~~~~~~l 852 (1513)
+||||||++||+++.+.+.+ .+..+.+++|+|++||+++.+..||++++|++|++++.|+.+++.+....+...
T Consensus 159 lllDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~~~~~~~~ 232 (236)
T cd03253 159 LLLDEATSALDTHTEREIQA-ALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAKGGLYAEM 232 (236)
T ss_pred EEEeCCcccCCHHHHHHHHH-HHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhcccHHHHH
Confidence 99999999999999877764 565555589999999999998889999999999999999999887765554443
No 308
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=4e-38 Score=359.60 Aligned_cols=212 Identities=23% Similarity=0.278 Sum_probs=178.6
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccC--CCCCcEEEEcCeeCCCCChHHh-hhc
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIV--EPTMGSIIIDNVDITKIGLHDL-RSR 1338 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~--ep~~G~I~IDGvdI~~i~l~~L-R~~ 1338 (1513)
|+++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+. +|++|+|.+||.++..++.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (243)
T TIGR01978 1 LKIKDLHVSVED--KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAG 78 (243)
T ss_pred CeEeeEEEEECC--EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccc
Confidence 578999999964 35999999999999999999999999999999999994 7999999999999998887664 456
Q ss_pred eEEEcCCCccccC-cHhhccCCC----CC------CC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhH
Q 000432 1339 LGIIPQDPTLFDG-TVRGNLDPL----VQ------YS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQ 1403 (1513)
Q Consensus 1339 isiVpQdp~LF~g-TIR~NLdp~----~~------~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQ 1403 (1513)
++++||+|.+|.+ |+++|+... .. .+ ++++.++++..++.+.. .+..+. ..|||||
T Consensus 79 i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~~---~~LS~G~ 149 (243)
T TIGR01978 79 LFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEF------LNRSVN---EGFSGGE 149 (243)
T ss_pred eEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhh------cccccc---cCcCHHH
Confidence 9999999999986 899998521 10 11 23466677777764311 122221 2599999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh--cCEEEEEeCCEEeEecCh
Q 000432 1404 RQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID--SDLVLVLSDGRIAEYDSP 1480 (1513)
Q Consensus 1404 RQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~--~DrIlVLd~G~IvE~Gtp 1480 (1513)
|||++|||||+++|++|+|||||++||.++.+.+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|++
T Consensus 150 ~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~ 229 (243)
T TIGR01978 150 KKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDV 229 (243)
T ss_pred HHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCH
Confidence 999999999999999999999999999999999999998865 47899999999999987 799999999999999999
Q ss_pred hHHH
Q 000432 1481 TKLL 1484 (1513)
Q Consensus 1481 ~eLl 1484 (1513)
++..
T Consensus 230 ~~~~ 233 (243)
T TIGR01978 230 ELAK 233 (243)
T ss_pred HHhc
Confidence 8654
No 309
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.6e-38 Score=374.52 Aligned_cols=211 Identities=23% Similarity=0.404 Sum_probs=186.3
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCC----ChHHhhh
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKI----GLHDLRS 1337 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i----~l~~LR~ 1337 (1513)
|++ |++++|+.. .+ |+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+. .....|+
T Consensus 2 l~~-~l~k~~~~~---~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~ 76 (352)
T PRK11144 2 LEL-NFKQQLGDL---CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKR 76 (352)
T ss_pred eEE-EEEEEeCCE---EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhC
Confidence 567 999999642 23 99999999999999999999999999999999999999999999998753 2456788
Q ss_pred ceEEEcCCCcccc-CcHhhccCCC-CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHcc
Q 000432 1338 RLGIIPQDPTLFD-GTVRGNLDPL-VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLK 1415 (1513)
Q Consensus 1338 ~isiVpQdp~LF~-gTIR~NLdp~-~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr 1415 (1513)
+++|+||++.+|. .|+++|+.+. ....++++.++++..++.+...+.| .+||||||||++|||||++
T Consensus 77 ~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----------~~LSgGq~qRvalaraL~~ 145 (352)
T PRK11144 77 RIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPLLDRYP-----------GSLSGGEKQRVAIGRALLT 145 (352)
T ss_pred CEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchhhhCCc-----------ccCCHHHHHHHHHHHHHHc
Confidence 9999999999996 5999999753 2345677889999998876655443 5799999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCC
Q 000432 1416 KSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLERED 1488 (1513)
Q Consensus 1416 ~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~ 1488 (1513)
+|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+|+++.+++.
T Consensus 146 ~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~p~ 221 (352)
T PRK11144 146 APELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWASSA 221 (352)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhCcc
Confidence 9999999999999999999999999988754 6899999999998876 99999999999999999999998865
No 310
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=3.8e-38 Score=370.21 Aligned_cols=203 Identities=24% Similarity=0.406 Sum_probs=177.1
Q ss_pred EEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCccc
Q 000432 1270 RYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLF 1349 (1513)
Q Consensus 1270 ~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF 1349 (1513)
+|+. .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|++++++||++.+|
T Consensus 2 ~y~~--~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~ 78 (302)
T TIGR01188 2 VYGD--FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVD 78 (302)
T ss_pred eeCC--eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCC
Confidence 4643 359999999999999999999999999999999999999999999999999976 4467789999999999999
Q ss_pred cC-cHhhccCCCC---CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000432 1350 DG-TVRGNLDPLV---QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILV 1421 (1513)
Q Consensus 1350 ~g-TIR~NLdp~~---~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILi 1421 (1513)
.+ |+++||.... ..+ ++++.++++.+++.+.. +.. ..+||||||||++|||||+++|++|+
T Consensus 79 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~----~~~LSgG~~qrv~la~al~~~p~lll 147 (302)
T TIGR01188 79 EDLTGRENLEMMGRLYGLPKDEAEERAEELLELFELGEAA-------DRP----VGTYSGGMRRRLDIAASLIHQPDVLF 147 (302)
T ss_pred CCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHh-------CCc----hhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 76 9999996421 122 34577888888876543 223 35799999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1422 LDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1422 LDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
|||||++||+++.+.+.+.|++.. +++|||+++|+++.+.+ ||+|++|++|++++.|+++++.++
T Consensus 148 LDEPt~gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 148 LDEPTTGLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred EeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999999998864 47899999999999976 999999999999999999998764
No 311
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-38 Score=360.99 Aligned_cols=212 Identities=22% Similarity=0.329 Sum_probs=185.4
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCC--------CcEEEEcCeeCCCCChH
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPT--------MGSIIIDNVDITKIGLH 1333 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~--------~G~I~IDGvdI~~i~l~ 1333 (1513)
|+++|++++|+.. ++|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++...+..
T Consensus 2 l~~~nl~~~~~~~--~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~ 79 (272)
T PRK13547 2 LTADHLHVARRHR--AILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAP 79 (272)
T ss_pred eEEEEEEEEECCE--eEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHH
Confidence 7899999999643 5999999999999999999999999999999999999998 99999999999988888
Q ss_pred HhhhceEEEcCCCc-cccCcHhhccCCCC--------CC---CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCCh
Q 000432 1334 DLRSRLGIIPQDPT-LFDGTVRGNLDPLV--------QY---SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSV 1401 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~-LF~gTIR~NLdp~~--------~~---sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSg 1401 (1513)
.+|+.++++||++. +|..|+++|+.... .. .++.++++++..++.+. .......|||
T Consensus 80 ~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSg 148 (272)
T PRK13547 80 RLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATAL-----------VGRDVTTLSG 148 (272)
T ss_pred HHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhh-----------hcCCcccCCH
Confidence 88999999999986 67889999996421 01 12356777777776543 3344568999
Q ss_pred hHHHHHHHHHHHc---------cCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEE
Q 000432 1402 GQRQLFCLGRTLL---------KKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVL 1469 (1513)
Q Consensus 1402 GQRQrl~LARALL---------r~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVL 1469 (1513)
|||||++|||||+ .+|++|||||||++||+++.+.+.+.|++..+ ++|+|+|+|+++.+.+ ||+|++|
T Consensus 149 G~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~l 228 (272)
T PRK13547 149 GELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAML 228 (272)
T ss_pred HHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEE
Confidence 9999999999999 59999999999999999999999999988653 6899999999999975 9999999
Q ss_pred eCCEEeEecChhHHHhc
Q 000432 1470 SDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1470 d~G~IvE~Gtp~eLl~~ 1486 (1513)
++|++++.|+++++++.
T Consensus 229 ~~G~i~~~g~~~~~~~~ 245 (272)
T PRK13547 229 ADGAIVAHGAPADVLTP 245 (272)
T ss_pred ECCeEEEecCHHHHcCH
Confidence 99999999999998753
No 312
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3e-38 Score=347.64 Aligned_cols=216 Identities=27% Similarity=0.415 Sum_probs=191.1
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCe---eCCCCChHHhhh
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNV---DITKIGLHDLRS 1337 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGv---dI~~i~l~~LR~ 1337 (1513)
.|+++|++..|+.- .+++|||++|+.||.+|+.||||||||||++++.|+..|++|+|.+||. |.+++..+ .+
T Consensus 2 ~i~i~~~~~~~~~~--~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~--~R 77 (345)
T COG1118 2 SIRINNVKKRFGAF--GALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVR--DR 77 (345)
T ss_pred ceeehhhhhhcccc--cccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchh--hc
Confidence 37788888888643 5899999999999999999999999999999999999999999999999 88774444 46
Q ss_pred ceEEEcCCCccc-cCcHhhccCCCC---------CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHH
Q 000432 1338 RLGIIPQDPTLF-DGTVRGNLDPLV---------QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLF 1407 (1513)
Q Consensus 1338 ~isiVpQdp~LF-~gTIR~NLdp~~---------~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl 1407 (1513)
+||+|.|+.-|| +.||++||.++- .-.+.++.+.|+.|+|..+-+..| ..||||||||+
T Consensus 78 ~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ryP-----------~QLSGGQrQRV 146 (345)
T COG1118 78 KVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRYP-----------AQLSGGQRQRV 146 (345)
T ss_pred ceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcCc-----------hhcChHHHHHH
Confidence 899999999998 569999998643 123456778899999988777766 46899999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1408 CLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1408 ~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
||||||...|++|+||||.++||++-.+.+++-|++.. -++|+++|||+.+.+.. ||||+||++|+|...|+|+|..
T Consensus 147 ALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~ 226 (345)
T COG1118 147 ALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVY 226 (345)
T ss_pred HHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHh
Confidence 99999999999999999999999999999999998765 37899999999998766 9999999999999999999999
Q ss_pred hcCChHH
Q 000432 1485 EREDSFF 1491 (1513)
Q Consensus 1485 ~~~~~~f 1491 (1513)
..+++.|
T Consensus 227 ~~P~s~f 233 (345)
T COG1118 227 DHPASRF 233 (345)
T ss_pred cCCCccc
Confidence 9888765
No 313
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.9e-38 Score=363.19 Aligned_cols=201 Identities=30% Similarity=0.442 Sum_probs=173.2
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-----------EEE
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-----------KAY 699 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-----------~ay 699 (1513)
.|+++|++.+|.+. .+++|+||+|++||+++++|||||||||||++|+|+.+|++|+|.++|. +|+
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~R~iam 79 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEKRGIAM 79 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhHCCEEE
Confidence 58999999999642 2999999999999999999999999999999999999999999999995 599
Q ss_pred EcCCCcccC-ccHHHHHccCCCCC-------chHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHH
Q 000432 700 VPQSPWILT-GNIRENILFGNQYD-------SCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAV 771 (1513)
Q Consensus 700 v~Q~~~l~~-~ti~eNI~fg~~~~-------~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal 771 (1513)
|+|+.-|+. .||+|||.||.... +++.+++.+.+++.+.++..| ..||||||||||||||+
T Consensus 80 VFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaRAl 148 (338)
T COG3839 80 VFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALARAL 148 (338)
T ss_pred EeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHHHH
Confidence 999999996 59999999997643 345556666667766666544 67999999999999999
Q ss_pred hcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCcc-ccCCEEEEEeCCeEEEecChHHHHhcC
Q 000432 772 YQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFL-PAADIILVMENGRIAQAGRFEELLKQN 846 (1513)
Q Consensus 772 ~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l-~~~d~i~vl~~G~i~~~g~~~~l~~~~ 846 (1513)
.++|+++|||||+|+||++....+-.+ ++.+. -+.|+|+|||+.... .-||+|+||++|+|.+.|++.|+.++.
T Consensus 149 Vr~P~v~L~DEPlSnLDa~lR~~mr~e-i~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 149 VRKPKVFLLDEPLSNLDAKLRVLMRSE-IKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred hcCCCEEEecCchhHhhHHHHHHHHHH-HHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 999999999999999999997766544 44443 268999999998764 569999999999999999999998653
No 314
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.5e-37 Score=349.66 Aligned_cols=206 Identities=31% Similarity=0.490 Sum_probs=186.3
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------E
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------K 697 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~ 697 (1513)
.++++|++++|+.. ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (221)
T cd03244 2 DIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRI 80 (221)
T ss_pred cEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhE
Confidence 48899999999743 357999999999999999999999999999999999999999999999873 6
Q ss_pred EEEcCCCcccCccHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000432 698 AYVPQSPWILTGNIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDADI 777 (1513)
Q Consensus 698 ayv~Q~~~l~~~ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~i 777 (1513)
+|++|++.++++|++|||.+......++..+.++..++.+.+..+|.|++|..++.+.+||||||||++||||++++|++
T Consensus 81 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 81 SIIPQDPVLFSGTIRSNLDPFGEYSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EEECCCCccccchHHHHhCcCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987766556666777788888888899999999999999999999999999999999999999
Q ss_pred EEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecC
Q 000432 778 YLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGR 838 (1513)
Q Consensus 778 llLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~ 838 (1513)
+||||||++||+.+.+.+. +.+..+.+++|+|++||+++.++.||++++|++|++++.|+
T Consensus 161 lllDEP~~~LD~~~~~~l~-~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 161 LVLDEATASVDPETDALIQ-KTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEEeCccccCCHHHHHHHH-HHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 9999999999999977765 56666656799999999999988899999999999998775
No 315
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.4e-37 Score=358.75 Aligned_cols=221 Identities=19% Similarity=0.300 Sum_probs=186.6
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCC---CcEEEEcCeeCCCC-----Ch
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPT---MGSIIIDNVDITKI-----GL 1332 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~---~G~I~IDGvdI~~i-----~l 1332 (1513)
.|+++||+++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++|+ +|+|.+||.++... ..
T Consensus 4 ~l~~~nl~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (262)
T PRK09984 4 IIRVEKLAKTFNQ--HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDI 81 (262)
T ss_pred EEEEeeEEEEeCC--eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhH
Confidence 5899999999964 35999999999999999999999999999999999999986 49999999998754 24
Q ss_pred HHhhhceEEEcCCCcccc-CcHhhccCCCC---------------CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCC
Q 000432 1333 HDLRSRLGIIPQDPTLFD-GTVRGNLDPLV---------------QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENG 1396 (1513)
Q Consensus 1333 ~~LR~~isiVpQdp~LF~-gTIR~NLdp~~---------------~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G 1396 (1513)
..+|++++|+||++.+|. .|+++|+.... +..++++.++++..++.+...+ ..
T Consensus 82 ~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~ 150 (262)
T PRK09984 82 RKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQ-----------RV 150 (262)
T ss_pred HHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhC-----------Cc
Confidence 567889999999999887 49999996321 1123456778888777554332 34
Q ss_pred CCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCE
Q 000432 1397 ENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGR 1473 (1513)
Q Consensus 1397 ~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~ 1473 (1513)
.+||+|||||++||||++.+|++|||||||++||.++.+.+.+.|++.. .++|+|+|+|+++.+.. ||+|++|++|+
T Consensus 151 ~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g~ 230 (262)
T PRK09984 151 STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQGH 230 (262)
T ss_pred cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCE
Confidence 5799999999999999999999999999999999999999999999875 37899999999998755 99999999999
Q ss_pred EeEecChhHHHhcCChHHHHHHHH
Q 000432 1474 IAEYDSPTKLLEREDSFFSQLIKE 1497 (1513)
Q Consensus 1474 IvE~Gtp~eLl~~~~~~f~~l~~~ 1497 (1513)
+++.|+++++ . +....+++..
T Consensus 231 i~~~g~~~~~-~--~~~~~~~~~~ 251 (262)
T PRK09984 231 VFYDGSSQQF-D--NERFDHLYRS 251 (262)
T ss_pred EEEeCCHHHh-c--cHHHHHHHhh
Confidence 9999999996 2 2345555544
No 316
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=8.1e-38 Score=363.53 Aligned_cols=213 Identities=28% Similarity=0.487 Sum_probs=189.9
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++||+.+|+.+ ..+|+||||+|++||.+|++||+|||||||+++|.|+++|++|+|.++|.|...- ....|+++|
T Consensus 4 ~i~~~~l~k~~~~~-~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~ig 81 (293)
T COG1131 4 VIEVRNLTKKYGGD-KTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRIG 81 (293)
T ss_pred eeeecceEEEeCCC-CEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhheE
Confidence 47899999999742 3599999999999999999999999999999999999999999999999998765 778999999
Q ss_pred EEcCCCccccC-cHhhccCCCC-------CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHH
Q 000432 1341 IIPQDPTLFDG-TVRGNLDPLV-------QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRT 1412 (1513)
Q Consensus 1341 iVpQdp~LF~g-TIR~NLdp~~-------~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARA 1412 (1513)
|+||+|.+++. |++|||+++. +..++++.+.++..+|.+.- +.. ...||+|||||+.||+|
T Consensus 82 y~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~-------~~~----~~~lS~G~kqrl~ia~a 150 (293)
T COG1131 82 YVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDKA-------NKK----VRTLSGGMKQRLSIALA 150 (293)
T ss_pred EEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhh-------Ccc----hhhcCHHHHHHHHHHHH
Confidence 99999998866 9999997532 12356789999999987621 222 34699999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC-C-cEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1413 LLKKSSILVLDEATASVDSATDGVIQKIISQEFK-D-RTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1413 LLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~-~-~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
|+.+|++|||||||++||+.+...+.+.|++..+ + +||++.+|.++.+.. ||||++|++|+++.+|+++++.+.
T Consensus 151 L~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 151 LLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999999998875 4 799999999999988 999999999999999999998654
No 317
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=8.7e-38 Score=351.13 Aligned_cols=202 Identities=25% Similarity=0.349 Sum_probs=176.7
Q ss_pred EEEEEEEEEEcCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChH---Hhh
Q 000432 1262 ISFHNLQIRYAEHL--PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLH---DLR 1336 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~---~LR 1336 (1513)
++++|++++|+++. ..+|+|+||++++||++||+|++|||||||+++|.|+++|++|+|.+||.++..++.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999997532 4699999999999999999999999999999999999999999999999999877654 468
Q ss_pred hceEEEcCCCcccc-CcHhhccCCCC----CCCH----HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHH
Q 000432 1337 SRLGIIPQDPTLFD-GTVRGNLDPLV----QYSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLF 1407 (1513)
Q Consensus 1337 ~~isiVpQdp~LF~-gTIR~NLdp~~----~~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl 1407 (1513)
+.++++||+|.+|. .|+.+|+.+.. ..+. +++.++++++++.+...+.| .+||+|||||+
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----------~~lS~G~~qrv 150 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYP-----------HNLSGGQKQRV 150 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcCh-----------hhCCHHHHHHH
Confidence 89999999999997 69999996421 2222 35677788888876665544 47999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhhcCEEEEEeCCEE
Q 000432 1408 CLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVIDSDLVLVLSDGRI 1474 (1513)
Q Consensus 1408 ~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~~DrIlVLd~G~I 1474 (1513)
+||||++++|++|+|||||++||.++.+.+.+.|++..+ ++|+|+|+|+++....||+|++|++|++
T Consensus 151 ~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 151 AIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 999999999999999999999999999999999988753 7999999999997777999999999986
No 318
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-37 Score=355.92 Aligned_cols=201 Identities=24% Similarity=0.321 Sum_probs=174.0
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +.+++|
T Consensus 2 l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~~ 74 (255)
T PRK11248 2 LQISHLYADYGG--KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERGV 74 (255)
T ss_pred EEEEEEEEEeCC--eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEEE
Confidence 789999999964 3599999999999999999999999999999999999999999999999998652 346899
Q ss_pred EcCCCcccc-CcHhhccCCC---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1342 IPQDPTLFD-GTVRGNLDPL---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1342 VpQdp~LF~-gTIR~NLdp~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+||++.+|. .|+++|+... ...+ ++++.++++..++.+...+ ...+||||||||++|||||
T Consensus 75 v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qrl~laral 143 (255)
T PRK11248 75 VFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKR-----------YIWQLSGGQRQRVGIARAL 143 (255)
T ss_pred EeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhC-----------ChhhCCHHHHHHHHHHHHH
Confidence 999999887 5999999642 1122 2456778888887654332 3457999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEe--CCEEeEecCh
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLS--DGRIAEYDSP 1480 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd--~G~IvE~Gtp 1480 (1513)
+++|++|||||||++||+.+...+.+.|++.. .++|+|+|+|+++.+.. ||+|++|+ +|++++.++.
T Consensus 144 ~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 144 AANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred hcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 99999999999999999999999999998863 37999999999999876 99999998 5999998764
No 319
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-38 Score=346.34 Aligned_cols=201 Identities=31% Similarity=0.474 Sum_probs=170.0
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------- 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------- 696 (1513)
.|.++|++..|+. .++++|||++|+.||++|+.|||||||||||++|.|+..|++|+|.++|.
T Consensus 2 ~i~i~~~~~~~~~---~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~ 78 (345)
T COG1118 2 SIRINNVKKRFGA---FGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRK 78 (345)
T ss_pred ceeehhhhhhccc---ccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcc
Confidence 3677888888863 57999999999999999999999999999999999999999999999996
Q ss_pred EEEEcCCCccc-CccHHHHHccCCCCC---------chHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHH
Q 000432 697 KAYVPQSPWIL-TGNIRENILFGNQYD---------SCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQ 766 (1513)
Q Consensus 697 ~ayv~Q~~~l~-~~ti~eNI~fg~~~~---------~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~ 766 (1513)
+|||.|+.-+| ..||.|||.||.+.. +.+..+.++.|.|..--+. ....||||||||||
T Consensus 79 VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~r-----------yP~QLSGGQrQRVA 147 (345)
T COG1118 79 VGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADR-----------YPAQLSGGQRQRVA 147 (345)
T ss_pred eeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhc-----------CchhcChHHHHHHH
Confidence 59999999888 579999999997432 2234445556655433232 24689999999999
Q ss_pred HHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCc-cccCCEEEEEeCCeEEEecChHHHH
Q 000432 767 IARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILK--DKSVLYVTHQVEF-LPAADIILVMENGRIAQAGRFEELL 843 (1513)
Q Consensus 767 lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~--~~TvilvtH~~~~-l~~~d~i~vl~~G~i~~~g~~~~l~ 843 (1513)
||||+..+|++|||||||+|||++..+.+ +..+..+.. +.|+++|||+.++ +..||+|++|+||+|.+.|+++|+.
T Consensus 148 LARALA~eP~vLLLDEPf~ALDa~vr~~l-r~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~ 226 (345)
T COG1118 148 LARALAVEPKVLLLDEPFGALDAKVRKEL-RRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVY 226 (345)
T ss_pred HHHHhhcCCCeEeecCCchhhhHHHHHHH-HHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHh
Confidence 99999999999999999999999997666 566655542 7899999999987 5669999999999999999999997
Q ss_pred hcC
Q 000432 844 KQN 846 (1513)
Q Consensus 844 ~~~ 846 (1513)
...
T Consensus 227 ~~P 229 (345)
T COG1118 227 DHP 229 (345)
T ss_pred cCC
Confidence 653
No 320
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.9e-37 Score=371.25 Aligned_cols=211 Identities=26% Similarity=0.424 Sum_probs=181.6
Q ss_pred EEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC----hHHhhhceEE
Q 000432 1266 NLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIG----LHDLRSRLGI 1341 (1513)
Q Consensus 1266 nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~----l~~LR~~isi 1341 (1513)
|++++|++. .+ |+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++...+ ....|+++++
T Consensus 4 ~l~~~~~~~---~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~ 79 (354)
T TIGR02142 4 RFSKRLGDF---SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIGY 79 (354)
T ss_pred EEEEEECCE---EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeEE
Confidence 899999642 25 999999999999999999999999999999999999999999999987542 3457889999
Q ss_pred EcCCCccccC-cHhhccCCC-CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHcc
Q 000432 1342 IPQDPTLFDG-TVRGNLDPL-VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLK 1415 (1513)
Q Consensus 1342 VpQdp~LF~g-TIR~NLdp~-~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr 1415 (1513)
+||++.+|.+ |+++|+.+. .... ++++.++++..++.+...+. ..+||||||||++|||||++
T Consensus 80 v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~-----------~~~LSgGqkqRvalAraL~~ 148 (354)
T TIGR02142 80 VFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELLGIGHLLGRL-----------PGRLSGGEKQRVAIGRALLS 148 (354)
T ss_pred EecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHcCChhHhcCC-----------hhhCCHHHHHHHHHHHHHHc
Confidence 9999999975 999999742 1111 23467788888776554333 35799999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCChHH
Q 000432 1416 KSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLEREDSFF 1491 (1513)
Q Consensus 1416 ~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f 1491 (1513)
+|++|+|||||++||+.+.+.+.+.|++..+ ++|+|+|+|+++.+.. ||+|++|++|++++.|+++++..++...|
T Consensus 149 ~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~~~~~~ 227 (354)
T TIGR02142 149 SPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWASPDLPW 227 (354)
T ss_pred CCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcCcCccc
Confidence 9999999999999999999999999988653 7899999999999876 99999999999999999999998765444
No 321
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=3.7e-37 Score=355.90 Aligned_cols=221 Identities=25% Similarity=0.369 Sum_probs=184.2
Q ss_pred eEEEEEEEEEEcCC-------CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChH
Q 000432 1261 TISFHNLQIRYAEH-------LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~-------~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~ 1333 (1513)
.|+++||+++|+++ ..++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++..++..
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 38999999999741 24699999999999999999999999999999999999999999999999999887653
Q ss_pred ---HhhhceEEEcCCCc--cc-cCcHhhccCC-C---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCC
Q 000432 1334 ---DLRSRLGIIPQDPT--LF-DGTVRGNLDP-L---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENW 1399 (1513)
Q Consensus 1334 ---~LR~~isiVpQdp~--LF-~gTIR~NLdp-~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nL 1399 (1513)
.+|++++++||++. ++ ..|+++|+.. . ...+ ++.+.++++..++.. .........|
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~----------~~~~~~~~~L 152 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDD----------SVLDKRPPQL 152 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCCh----------hHhhCCCccC
Confidence 47889999999983 43 4699999842 1 1111 123555565555431 1234456789
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeE
Q 000432 1400 SVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAE 1476 (1513)
Q Consensus 1400 SgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE 1476 (1513)
|+|||||++|||||+++|+||||||||++||.++...+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++
T Consensus 153 S~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~ 232 (268)
T PRK10419 153 SGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVE 232 (268)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEee
Confidence 99999999999999999999999999999999999999999987653 7899999999999986 99999999999999
Q ss_pred ecChhHHHhcCChHHH
Q 000432 1477 YDSPTKLLEREDSFFS 1492 (1513)
Q Consensus 1477 ~Gtp~eLl~~~~~~f~ 1492 (1513)
.|+++++... ++.|.
T Consensus 233 ~g~~~~~~~~-~~~~~ 247 (268)
T PRK10419 233 TQPVGDKLTF-SSPAG 247 (268)
T ss_pred eCChhhccCC-CCHHH
Confidence 9999999865 44443
No 322
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.9e-37 Score=347.72 Aligned_cols=204 Identities=28% Similarity=0.438 Sum_probs=179.2
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
++++||+++|+. .++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.... ++++++
T Consensus 1 l~l~~v~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~~ 74 (223)
T TIGR03740 1 LETKNLSKRFGK--QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIGS 74 (223)
T ss_pred CEEEeEEEEECC--EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEEE
Confidence 578999999974 35999999999999999999999999999999999999999999999999876422 357999
Q ss_pred EcCCCcccc-CcHhhccCCC---CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCC
Q 000432 1342 IPQDPTLFD-GTVRGNLDPL---VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKS 1417 (1513)
Q Consensus 1342 VpQdp~LF~-gTIR~NLdp~---~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~ 1417 (1513)
+||++.+|. .|+++|+... ...+++++.++++..++.+..... ..+||+|||||++||||++++|
T Consensus 75 ~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~~rv~laral~~~p 143 (223)
T TIGR03740 75 LIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTGKKK-----------AKQFSLGMKQRLGIAIALLNHP 143 (223)
T ss_pred EcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHHhhh-----------HhhCCHHHHHHHHHHHHHhcCC
Confidence 999999886 6999999631 234567888999999987654332 3469999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhH
Q 000432 1418 SILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTK 1482 (1513)
Q Consensus 1418 ~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~e 1482 (1513)
++|+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.. ||+|++|++|++++.|++.+
T Consensus 144 ~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 144 KLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred CEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 9999999999999999999999998764 47899999999999865 99999999999999999875
No 323
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-37 Score=333.61 Aligned_cols=171 Identities=44% Similarity=0.746 Sum_probs=162.3
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|+...+.+++|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+...+|+++++
T Consensus 1 l~~~~l~~~~~~~~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 80 (171)
T cd03228 1 IEFKNVSFSYPGRPKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIAY 80 (171)
T ss_pred CEEEEEEEEcCCCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEEE
Confidence 57899999997643469999999999999999999999999999999999999999999999999998888889999999
Q ss_pred EcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000432 1342 IPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILV 1421 (1513)
Q Consensus 1342 VpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILi 1421 (1513)
+||+|.+|+.|++||+ ||+|||||++||||++++|++|+
T Consensus 81 ~~~~~~~~~~t~~e~l-----------------------------------------LS~G~~~rl~la~al~~~p~lll 119 (171)
T cd03228 81 VPQDPFLFSGTIRENI-----------------------------------------LSGGQRQRIAIARALLRDPPILI 119 (171)
T ss_pred EcCCchhccchHHHHh-----------------------------------------hCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999997 99999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCE
Q 000432 1422 LDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGR 1473 (1513)
Q Consensus 1422 LDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~ 1473 (1513)
|||||++||+++...+.+.|++..+++|+|+++|+++.+..||++++|++|+
T Consensus 120 lDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 120 LDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 9999999999999999999998877899999999999998899999999985
No 324
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.8e-38 Score=362.57 Aligned_cols=203 Identities=32% Similarity=0.440 Sum_probs=171.8
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-----------EE
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-----------KA 698 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-----------~a 698 (1513)
..++++|++.+|. +.++++|+||+|++||++++.|||||||||+|++|.|+..|++|+|.++|. ++
T Consensus 4 ~~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~kR~ig 80 (352)
T COG3842 4 PALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPEKRPIG 80 (352)
T ss_pred ceEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhhcccc
Confidence 4699999999997 368999999999999999999999999999999999999999999999995 49
Q ss_pred EEcCCCcccC-ccHHHHHccCCCC----C-ch---HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHH
Q 000432 699 YVPQSPWILT-GNIRENILFGNQY----D-SC---KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIAR 769 (1513)
Q Consensus 699 yv~Q~~~l~~-~ti~eNI~fg~~~----~-~~---~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lAR 769 (1513)
+|+|+.-||. .||+|||.||... . ++ +..++++..+|.+-- ..+...|||||||||||||
T Consensus 81 ~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~-----------~R~p~qLSGGQqQRVALAR 149 (352)
T COG3842 81 MVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFA-----------DRKPHQLSGGQQQRVALAR 149 (352)
T ss_pred eeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhh-----------hhChhhhChHHHHHHHHHH
Confidence 9999999995 6999999999762 1 12 333444444443322 2456789999999999999
Q ss_pred HHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCc-cccCCEEEEEeCCeEEEecChHHHHhcC
Q 000432 770 AVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGI-LKDKSVLYVTHQVEF-LPAADIILVMENGRIAQAGRFEELLKQN 846 (1513)
Q Consensus 770 al~~~~~illLDep~salD~~~~~~i~~~~~~~~-~~~~TvilvtH~~~~-l~~~d~i~vl~~G~i~~~g~~~~l~~~~ 846 (1513)
||..+|+++|||||+||||.+..+++-.+..+-. ..|.|.|+|||+-+. +..+|+|+||++|+|.+.|+++|+....
T Consensus 150 AL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 150 ALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred HhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 9999999999999999999999888765543222 138999999999876 7789999999999999999999998764
No 325
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=1.4e-36 Score=394.03 Aligned_cols=231 Identities=23% Similarity=0.317 Sum_probs=158.2
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHh------ccC---CCCCcEEEEcCe------
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIF------RIV---EPTMGSIIIDNV------ 1325 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~------rl~---ep~~G~I~IDGv------ 1325 (1513)
.++++|++. ..|+|+|++|++||.+||+|.+|||||||+.-++ ++. .+..+...++|.
T Consensus 614 ~L~v~~l~~-------~~L~~isl~Ip~GeivgVtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 686 (943)
T PRK00349 614 FLKLKGARE-------NNLKNVDVEIPLGKFTCVTGVSGSGKSTLINETLYKALARKLNGAKKVPGKHKEIEGLEHLDKV 686 (943)
T ss_pred eEEecCCcc-------CCcCceEEEEeCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHhcccccCCCCCcccccccCCCce
Confidence 578888852 2599999999999999999999999999998764 222 123333334443
Q ss_pred ------eCCC---------CC-hHHhhhceEEEc---------CCCcccc-----------CcHhhccCCCCC-------
Q 000432 1326 ------DITK---------IG-LHDLRSRLGIIP---------QDPTLFD-----------GTVRGNLDPLVQ------- 1362 (1513)
Q Consensus 1326 ------dI~~---------i~-l~~LR~~isiVp---------Qdp~LF~-----------gTIR~NLdp~~~------- 1362 (1513)
+|.. .+ .+.+|.-++=.| +.-.+.+ |+++.|+.+..+
T Consensus 687 v~vdQ~pig~~~RS~~~Ty~g~~d~iR~lfa~~~~a~~~g~~~~~FS~N~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 766 (943)
T PRK00349 687 IDIDQSPIGRTPRSNPATYTGVFDPIRELFAGTPEAKARGYKPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCDV 766 (943)
T ss_pred EEEecCCCCCCCCCCceeeccccHHHHHHhccCccccccCCCcccCCCCCCCCCCCcccccceEEEEeccCCCccccCcc
Confidence 3221 11 133444443222 2211111 566666543221
Q ss_pred -----------------CCHHH-----HHHHHHHc----CCcHHHHhh-hccccc-hhccCCCCCChhHHHHHHHHHHHc
Q 000432 1363 -----------------YSDKQ-----VWEALDKC----QLGDLVRAK-EEKLDS-TVAENGENWSVGQRQLFCLGRTLL 1414 (1513)
Q Consensus 1363 -----------------~sdee-----i~~aL~~~----~l~~~I~~l-p~gLdt-~V~e~G~nLSgGQRQrl~LARALL 1414 (1513)
.+-.| +.++++-. .+.+..+.+ .-||+. ..+.....||||||||+.|||||+
T Consensus 767 C~G~R~~~e~l~v~~~g~~i~dvl~ltv~E~l~~f~~~~~i~~~l~~L~~vgL~~l~l~~~~~tLSgGEkQRl~LAraL~ 846 (943)
T PRK00349 767 CKGKRYNRETLEVKYKGKNIADVLDMTVEEALEFFEAIPKIARKLQTLVDVGLGYIKLGQPATTLSGGEAQRVKLAKELS 846 (943)
T ss_pred ccCccccccceEEEECCCCHHHHhcCcHHHHHHHHHhchhhhHHHHHHHHCCCCcccccCCcccCCHHHHHHHHHHHHHh
Confidence 11111 22222221 010000000 015554 357777899999999999999999
Q ss_pred cCC---CEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEE------eCCEEeEecChhHHH
Q 000432 1415 KKS---SILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVIDSDLVLVL------SDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1415 r~~---~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~~DrIlVL------d~G~IvE~Gtp~eLl 1484 (1513)
++| +++||||||++||.++.+.+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|+++.
T Consensus 847 ~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~ 926 (943)
T PRK00349 847 KRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIKTADWIIDLGPEGGDGGGEIVATGTPEEVA 926 (943)
T ss_pred cCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEecCCcCCCCCEEEEeCCHHHHH
Confidence 999 9999999999999999999999998764 578999999999999999999999 799999999999999
Q ss_pred hcCChHHHHHHHHH
Q 000432 1485 EREDSFFSQLIKEY 1498 (1513)
Q Consensus 1485 ~~~~~~f~~l~~~~ 1498 (1513)
+++.++-.+.++.+
T Consensus 927 ~~~~s~t~~~l~~~ 940 (943)
T PRK00349 927 KVEASYTGRYLKPV 940 (943)
T ss_pred hCcccHHHHHHHHH
Confidence 88777666665543
No 326
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3e-37 Score=330.35 Aligned_cols=220 Identities=26% Similarity=0.407 Sum_probs=186.6
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHH-hhhce
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHD-LRSRL 1339 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~-LR~~i 1339 (1513)
-++++||+..|.+. .+|+||||++++||.++++||+|+|||||+++|+|+.+|.+|+|.++|.||...+.|+ .|..|
T Consensus 3 mL~v~~l~~~YG~~--~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi 80 (237)
T COG0410 3 MLEVENLSAGYGKI--QALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGI 80 (237)
T ss_pred ceeEEeEeecccce--eEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCe
Confidence 37899999999863 5999999999999999999999999999999999999999999999999999999998 58899
Q ss_pred EEEcCCCccccC-cHhhccCCCCC-CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCC
Q 000432 1340 GIIPQDPTLFDG-TVRGNLDPLVQ-YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKS 1417 (1513)
Q Consensus 1340 siVpQdp~LF~g-TIR~NLdp~~~-~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~ 1417 (1513)
++|||...+|.. ||.|||..... ..+++-++. .+ |.+-++---|.......|.+|||||+|.++|||||..+|
T Consensus 81 ~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~~----~~-e~v~~lFP~Lker~~~~aG~LSGGEQQMLAiaRALm~~P 155 (237)
T COG0410 81 AYVPEGRRIFPRLTVEENLLLGAYARRDKEAQER----DL-EEVYELFPRLKERRNQRAGTLSGGEQQMLAIARALMSRP 155 (237)
T ss_pred EeCcccccchhhCcHHHHHhhhhhcccccccccc----cH-HHHHHHChhHHHHhcCcccCCChHHHHHHHHHHHHhcCC
Confidence 999999999965 99999974311 111111110 01 112222223455556778899999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcC
Q 000432 1418 SILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLERE 1487 (1513)
Q Consensus 1418 ~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~ 1487 (1513)
|+|+|||||.+|-|.--+.|.++|++..+ +-||+.|-++.....+ +||.+||++|+|+..|+.+||.+++
T Consensus 156 klLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~~ 228 (237)
T COG0410 156 KLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLADP 228 (237)
T ss_pred CEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcCH
Confidence 99999999999999999999999998864 5699999999998776 9999999999999999999999874
No 327
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.3e-37 Score=317.22 Aligned_cols=198 Identities=30% Similarity=0.442 Sum_probs=169.7
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-----------EEEE
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-----------KAYV 700 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-----------~ayv 700 (1513)
+.++++.|+|... . -..+++|++||++||+|||||||||||++|.|+..|.+|+|.++|. ++++
T Consensus 2 l~L~~V~~~y~~~----~-~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~RPVSml 76 (231)
T COG3840 2 LALDDVRFSYGHL----P-MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAERPVSML 76 (231)
T ss_pred ccccceEEeeCcc----e-EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcccCChhhh
Confidence 4577899999642 1 2578999999999999999999999999999999999999999995 4899
Q ss_pred cCCCcccCc-cHHHHHccCCC-------CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHh
Q 000432 701 PQSPWILTG-NIRENILFGNQ-------YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVY 772 (1513)
Q Consensus 701 ~Q~~~l~~~-ti~eNI~fg~~-------~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~ 772 (1513)
+|+.-+|.- ||++||-+|.. .+.++.+.+....+|....+.+| ..|||||||||||||++.
T Consensus 77 FQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----------~~LSGGqRQRvALARclv 145 (231)
T COG3840 77 FQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----------GELSGGQRQRVALARCLV 145 (231)
T ss_pred hhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCc-----------cccCchHHHHHHHHHHHh
Confidence 999999965 99999999953 24456666777778887778887 369999999999999999
Q ss_pred cCCCEEEeeCcCCCCCHHHHHHHHHHHHhhh--cCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHhcC
Q 000432 773 QDADIYLLDDPFSAVDAHTGTQLFKDCLMGI--LKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLKQN 846 (1513)
Q Consensus 773 ~~~~illLDep~salD~~~~~~i~~~~~~~~--~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~~~ 846 (1513)
++.+|+|||||||||||.-..+... .+..+ -++.|+++|||+++-+.. +|+++++++|+|.++|+.+++....
T Consensus 146 R~~PilLLDEPFsALdP~LR~eMl~-Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~~ 221 (231)
T COG3840 146 REQPILLLDEPFSALDPALRAEMLA-LVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSGK 221 (231)
T ss_pred ccCCeEEecCchhhcCHHHHHHHHH-HHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhccC
Confidence 9999999999999999998776654 44433 357899999999998755 9999999999999999999987654
No 328
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-37 Score=345.95 Aligned_cols=232 Identities=23% Similarity=0.386 Sum_probs=188.1
Q ss_pred EEEEEEEEEEcCCC--CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC-C----CCcEEEEcCeeCCCCChHH
Q 000432 1262 ISFHNLQIRYAEHL--PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE-P----TMGSIIIDNVDITKIGLHD 1334 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~--~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e-p----~~G~I~IDGvdI~~i~l~~ 1334 (1513)
++++|++..|..+. -.+++||||++++||.+||||.|||||||+.++++|+++ | .+|+|.+||.|+.+++-+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 57899999997543 359999999999999999999999999999999999998 3 6799999999999999886
Q ss_pred hh----hceEEEcCCCcc-cc--CcHhhcc----CCCCCC-C----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCC
Q 000432 1335 LR----SRLGIIPQDPTL-FD--GTVRGNL----DPLVQY-S----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGEN 1398 (1513)
Q Consensus 1335 LR----~~isiVpQdp~L-F~--gTIR~NL----dp~~~~-s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~n 1398 (1513)
+| +.|++|||||.- |+ -||.+-+ .-.... + .++..++|+.+++.+--+ .+..-...
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~--------~~~~YPhe 153 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPER--------RLKSYPHE 153 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHH--------HHhhCCcc
Confidence 54 379999999952 22 1333333 111111 1 346778888888875311 11222356
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEe
Q 000432 1399 WSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIA 1475 (1513)
Q Consensus 1399 LSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~Iv 1475 (1513)
||||||||+.||-||+.+|++||-||||+|||..+.++|.+.|++.. .+.|+|+|||++..+.. ||||.||.+|+||
T Consensus 154 lSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iV 233 (316)
T COG0444 154 LSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIV 233 (316)
T ss_pred cCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEE
Confidence 89999999999999999999999999999999999999999998766 48999999999999877 9999999999999
Q ss_pred EecChhHHHhcCChHHHH-HHHHHhhc
Q 000432 1476 EYDSPTKLLEREDSFFSQ-LIKEYSMR 1501 (1513)
Q Consensus 1476 E~Gtp~eLl~~~~~~f~~-l~~~~~~~ 1501 (1513)
|.|+.+++.+++.-.|.+ |++..-..
T Consensus 234 E~g~~~~i~~~P~HPYT~~Ll~s~P~~ 260 (316)
T COG0444 234 EEGPVEEIFKNPKHPYTRGLLNSLPRL 260 (316)
T ss_pred EeCCHHHHhcCCCChHHHHHHHhCccc
Confidence 999999999988766654 55544333
No 329
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=6e-37 Score=344.50 Aligned_cols=205 Identities=38% Similarity=0.610 Sum_probs=182.2
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------E
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------K 697 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~ 697 (1513)
.++++|+++.|+.. .+++|+|+||+|++|++++|+||||||||||+++|+|+.+|++|+|.++|. +
T Consensus 2 ~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 80 (220)
T cd03245 2 RIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNI 80 (220)
T ss_pred eEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 48899999999632 357999999999999999999999999999999999999999999999883 6
Q ss_pred EEEcCCCcccCccHHHHHccCCCC-CchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCC
Q 000432 698 AYVPQSPWILTGNIRENILFGNQY-DSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDAD 776 (1513)
Q Consensus 698 ayv~Q~~~l~~~ti~eNI~fg~~~-~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~ 776 (1513)
+|++|+++++..|++||+.++.+. ++++..+.++.+++.+.++.+|.|.+|.+.....+||||||||++||||+..+|+
T Consensus 81 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~ 160 (220)
T cd03245 81 GYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPP 160 (220)
T ss_pred EEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCC
Confidence 999999999989999999887543 3445667778888888888999999999999999999999999999999999999
Q ss_pred EEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEec
Q 000432 777 IYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAG 837 (1513)
Q Consensus 777 illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g 837 (1513)
++||||||++||+.+.+.+. +.+..+.+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 161 llllDEPt~~LD~~~~~~l~-~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 161 ILLLDEPTSAMDMNSEERLK-ERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred EEEEeCccccCCHHHHHHHH-HHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 99999999999999987776 4566655568999999999988779999999999998654
No 330
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=6.2e-34 Score=346.29 Aligned_cols=443 Identities=19% Similarity=0.207 Sum_probs=313.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCHH------HHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 000432 376 WIFGARQLGLRLRAALISHLYRKGLHLSSQSRQSHTSG------EIINYMSVDVQRISDFIFYSN-YMFMLPVQISLAIY 448 (1513)
Q Consensus 376 ~~~~~~~~~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G------~i~nl~s~D~~~i~~~~~~~~-~~~~~pl~i~~~l~ 448 (1513)
..+..+++..+.|.-|...+.+|-+.-...++-. ..| ..=+++..|+..+.+....+. .+.-..++++....
T Consensus 106 ~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~-~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islisF~~ 184 (604)
T COG4178 106 QTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLA-QAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLISFTG 184 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH-hcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHH
Confidence 4455678999999999999999999877544322 222 234588888888777554433 23333444444555
Q ss_pred HHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchh
Q 000432 449 ILRTNLG---------------LGSLAALAATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWD 513 (1513)
Q Consensus 449 ~L~~~lg---------------~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E 513 (1513)
+||...| ....+.++-.+....+...++|...+...+..+....--.....+.++-..|-+|+-|
T Consensus 185 iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly~GE 264 (604)
T COG4178 185 ILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALYRGE 264 (604)
T ss_pred HHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHhcCc
Confidence 6663333 1122222222222222334444444443333333223223455788899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH
Q 000432 514 TRFLQKLESLRQVECIWLWKSLR----LSATSAFIFWGSPTFISVVTFGACMLLGIQLTAGRVLSALATFRMLQDPIFNL 589 (1513)
Q Consensus 514 ~~f~~~i~~~R~~E~~~~~~~~~----~~~~~~~~~~~~p~~v~~~~f~~~~~~~~~Lt~~~~ft~l~l~~~L~~pl~~l 589 (1513)
+...+++++.-..-++..++... +..+.....++++++ -...++-.++.+.++.|.+..+...|+.+...+..+
T Consensus 265 ~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~--P~li~ap~~f~g~i~~G~lmqa~~aF~~v~sslswf 342 (604)
T COG4178 265 KVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVL--PILIAAPRYFSGQITFGGLMQAVGAFGQVHSSLSWF 342 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHH--HHHhccHhhhcCcChHHHHHHHHHHHHHHHHHHHHH
Confidence 98888776543332222222211 111111122222211 111222235678999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcccc--cccccccccCC------CCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCc
Q 000432 590 PDLLSNIAQGKVSADRIAAYLQEDE--IQRDAVEYVPK------GRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGM 661 (1513)
Q Consensus 590 p~~i~~~~~a~vs~~RI~~fL~~~e--~~~~~~~~~~~------~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~ 661 (1513)
-+.+..+.+-++++.|+.+|-+.-+ ..++.....+. ...+..|.++|++..=|+. .+.+++.|+++++|+
T Consensus 343 i~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~--~~ll~~l~~~v~~G~ 420 (604)
T COG4178 343 IDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG--QTLLSELNFEVRPGE 420 (604)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC--CeeeccceeeeCCCC
Confidence 9999999999999999999985322 10111000000 1114689999999987653 489999999999999
Q ss_pred EEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC--eEEEEcCCCcccCccHHHHHccCCC---CCchHHHHHHHHHhcH
Q 000432 662 KVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG--TKAYVPQSPWILTGNIRENILFGNQ---YDSCKYDRTVEACALV 736 (1513)
Q Consensus 662 ~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g--~~ayv~Q~~~l~~~ti~eNI~fg~~---~~~~~~~~v~~~~~l~ 736 (1513)
.+.|.|+||||||||+++|.|..|--+|+|..+. ..-|+||.|++..||.||-|++.++ ++++.+.+++.+|+|.
T Consensus 421 ~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l~~vL~~vgL~ 500 (604)
T COG4178 421 RLLITGESGAGKTSLLRALAGLWPWGSGRISMPADSALLFLPQRPYLPQGTLREALCYPNAAPDFSDAELVAVLHKVGLG 500 (604)
T ss_pred EEEEECCCCCCHHHHHHHHhccCccCCCceecCCCCceEEecCCCCCCCccHHHHHhCCCCCCCCChHHHHHHHHHcCcH
Confidence 9999999999999999999999999999998873 3699999999999999999999763 6778899999999999
Q ss_pred HHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCC
Q 000432 737 KDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQV 816 (1513)
Q Consensus 737 ~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~ 816 (1513)
+-.+.+.+-++ -...||||||||+++||.++++|++++|||+|||||++++..+++ .+++.+.+.|+|-|.||.
T Consensus 501 ~L~~rl~~~~~-----W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q-~l~~~lp~~tvISV~Hr~ 574 (604)
T COG4178 501 DLAERLDEEDR-----WDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQ-LLKEELPDATVISVGHRP 574 (604)
T ss_pred HHHHHHhccCc-----HhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHH-HHHhhCCCCEEEEeccch
Confidence 88888754332 445799999999999999999999999999999999999888875 577778999999999999
Q ss_pred CccccCCEEEEEe
Q 000432 817 EFLPAADIILVME 829 (1513)
Q Consensus 817 ~~l~~~d~i~vl~ 829 (1513)
......++.+.+.
T Consensus 575 tl~~~h~~~l~l~ 587 (604)
T COG4178 575 TLWNFHSRQLELL 587 (604)
T ss_pred hhHHHHhhheeec
Confidence 8877766665554
No 331
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-37 Score=333.18 Aligned_cols=170 Identities=32% Similarity=0.571 Sum_probs=158.0
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
++++|++++|+.. ++|+|+||++++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+ .++|+++++
T Consensus 1 l~~~~l~~~~~~~--~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (173)
T cd03230 1 IEVRNLSKRYGKK--TALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIGY 77 (173)
T ss_pred CEEEEEEEEECCe--eeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEEE
Confidence 4789999999643 5999999999999999999999999999999999999999999999999998766 678899999
Q ss_pred EcCCCccccC-cHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEE
Q 000432 1342 IPQDPTLFDG-TVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSIL 1420 (1513)
Q Consensus 1342 VpQdp~LF~g-TIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~IL 1420 (1513)
+||+|.+|.+ |+++|+. ||||||||++||||++++|+||
T Consensus 78 ~~q~~~~~~~~tv~~~~~----------------------------------------LS~G~~qrv~laral~~~p~il 117 (173)
T cd03230 78 LPEEPSLYENLTVRENLK----------------------------------------LSGGMKQRLALAQALLHDPELL 117 (173)
T ss_pred EecCCccccCCcHHHHhh----------------------------------------cCHHHHHHHHHHHHHHcCCCEE
Confidence 9999999987 9999973 9999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEE
Q 000432 1421 VLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRI 1474 (1513)
Q Consensus 1421 iLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~I 1474 (1513)
+|||||++||..+.+.+.+.|++.. ++.|+|+++|+.+.+.+ ||+|++|++|++
T Consensus 118 llDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 118 ILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 9999999999999999999998865 46899999999999885 999999999974
No 332
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=7.5e-37 Score=349.33 Aligned_cols=208 Identities=29% Similarity=0.430 Sum_probs=181.4
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++||+++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.++| +..++
T Consensus 4 ~l~~~~l~~~~~~--~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i~ 70 (251)
T PRK09544 4 LVSLENVSVSFGQ--RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRIG 70 (251)
T ss_pred EEEEeceEEEECC--ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCEE
Confidence 5899999999974 3599999999999999999999999999999999999999999999987 35799
Q ss_pred EEcCCCcccc---CcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCC
Q 000432 1341 IIPQDPTLFD---GTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKS 1417 (1513)
Q Consensus 1341 iVpQdp~LF~---gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~ 1417 (1513)
|+||+|.++. .|+++|+......+++++.++++.+++.+..... ...||||||||++||||++++|
T Consensus 71 ~v~q~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----------~~~LSgGq~qrv~laral~~~p 139 (251)
T PRK09544 71 YVPQKLYLDTTLPLTVNRFLRLRPGTKKEDILPALKRVQAGHLIDAP-----------MQKLSGGETQRVLLARALLNRP 139 (251)
T ss_pred EeccccccccccChhHHHHHhccccccHHHHHHHHHHcCChHHHhCC-----------hhhCCHHHHHHHHHHHHHhcCC
Confidence 9999998765 4899997543345678899999999987665432 3579999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCChHHHHH
Q 000432 1418 SILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLEREDSFFSQL 1494 (1513)
Q Consensus 1418 ~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~l 1494 (1513)
++|+|||||++||+.+...+.+.|++..+ ++|+|+|+|+++.+.. ||+|++|++ ++++.|+++++.++ ..|.++
T Consensus 140 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~~--~~~~~~ 216 (251)
T PRK09544 140 QLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVSLH--PEFISM 216 (251)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHhCC--HHHHHH
Confidence 99999999999999999999999987643 7899999999999866 999999965 79999999998753 455555
Q ss_pred H
Q 000432 1495 I 1495 (1513)
Q Consensus 1495 ~ 1495 (1513)
+
T Consensus 217 ~ 217 (251)
T PRK09544 217 F 217 (251)
T ss_pred h
Confidence 4
No 333
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.8e-37 Score=334.27 Aligned_cols=172 Identities=35% Similarity=0.544 Sum_probs=159.6
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCC--hHHhhhce
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIG--LHDLRSRL 1339 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~--l~~LR~~i 1339 (1513)
|+++|++++|++ .++++|+||++++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+++ ....|+.+
T Consensus 1 i~~~~l~~~~~~--~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i 78 (178)
T cd03229 1 LELKNVSKRYGQ--KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRRI 78 (178)
T ss_pred CEEEEEEEEECC--eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhcE
Confidence 578999999964 35999999999999999999999999999999999999999999999999998876 56788999
Q ss_pred EEEcCCCccccC-cHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCC
Q 000432 1340 GIIPQDPTLFDG-TVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSS 1418 (1513)
Q Consensus 1340 siVpQdp~LF~g-TIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ 1418 (1513)
+|+||+|.+|.+ |+++|+... ||+|||||++||||++++|+
T Consensus 79 ~~~~q~~~~~~~~t~~~~l~~~--------------------------------------lS~G~~qr~~la~al~~~p~ 120 (178)
T cd03229 79 GMVFQDFALFPHLTVLENIALG--------------------------------------LSGGQQQRVALARALAMDPD 120 (178)
T ss_pred EEEecCCccCCCCCHHHheeec--------------------------------------CCHHHHHHHHHHHHHHCCCC
Confidence 999999998865 999998752 99999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCE
Q 000432 1419 ILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGR 1473 (1513)
Q Consensus 1419 ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~ 1473 (1513)
+++|||||++||+.+...+.+.|++..+ ++|+|+++|+++.+.+ ||+|++|++|+
T Consensus 121 llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 121 VLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 9999999999999999999999988654 5899999999999985 99999999985
No 334
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.6e-37 Score=336.30 Aligned_cols=192 Identities=28% Similarity=0.413 Sum_probs=156.3
Q ss_pred EEEEeEEEEeCCCC-CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------------
Q 000432 632 VEVVNGKFSWNPES-SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------- 696 (1513)
Q Consensus 632 I~~~~~sf~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------- 696 (1513)
++++|++..|.... ..++|+++||+|++||++||+|||||||||||++|.|.-.|++|+|.++|.
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 56889999886432 247899999999999999999999999999999999999999999999983
Q ss_pred ---EEEEcCCCcccC-ccHHHHHccCCCCC-------chHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHH
Q 000432 697 ---KAYVPQSPWILT-GNIRENILFGNQYD-------SCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRI 765 (1513)
Q Consensus 697 ---~ayv~Q~~~l~~-~ti~eNI~fg~~~~-------~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi 765 (1513)
+|||+|+..|.. -|++|||.+...+. .++.+..++..+|.+... ......|||||||||
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHHHH
Confidence 599999998875 59999999532221 112222233333332221 134568999999999
Q ss_pred HHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhh--cCCcEEEEEccCCCccccCCEEEEEeCCeEE
Q 000432 766 QIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGI--LKDKSVLYVTHQVEFLPAADIILVMENGRIA 834 (1513)
Q Consensus 766 ~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~--~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~ 834 (1513)
|||||+..+|+|++.||||.+||.++++.+++ .+..+ ..|+|+|+|||+......||+++.|+||++.
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~-ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~ 221 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLE-LLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIE 221 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHH-HHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeee
Confidence 99999999999999999999999999999986 45444 3488999999999999999999999999954
No 335
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=8.6e-37 Score=350.61 Aligned_cols=221 Identities=18% Similarity=0.348 Sum_probs=182.8
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCee-----CCCCChHH-
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVD-----ITKIGLHD- 1334 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvd-----I~~i~l~~- 1334 (1513)
.|+++||+++|++. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +..++..+
T Consensus 3 ~l~~~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (253)
T TIGR02323 3 LLQVSGLSKSYGGG--KGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAER 80 (253)
T ss_pred eEEEeeeEEEeCCc--eEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHHH
Confidence 58999999999643 58999999999999999999999999999999999999999999999988 77776554
Q ss_pred ---hhhceEEEcCCCc--c-ccCcHhhccCC----CCC----CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCC
Q 000432 1335 ---LRSRLGIIPQDPT--L-FDGTVRGNLDP----LVQ----YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWS 1400 (1513)
Q Consensus 1335 ---LR~~isiVpQdp~--L-F~gTIR~NLdp----~~~----~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLS 1400 (1513)
+++.++++||+|. + +..|+.+|+.. ... ..++++.+.++..++.+ +.......+||
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~----------~~~~~~~~~LS 150 (253)
T TIGR02323 81 RRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDP----------TRIDDLPRAFS 150 (253)
T ss_pred HHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCCh----------hhhhcCchhcC
Confidence 3467999999985 2 34588888731 111 12344555566555531 23344567899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEe
Q 000432 1401 VGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEY 1477 (1513)
Q Consensus 1401 gGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~ 1477 (1513)
||||||++|||||+++|++|+|||||++||+.+.+.+.+.|++..+ +.|+|+|+|+++.+.. ||++++|++|++++.
T Consensus 151 gG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~ 230 (253)
T TIGR02323 151 GGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVES 230 (253)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999987643 7899999999999986 999999999999999
Q ss_pred cChhHHHhcCChHHHH
Q 000432 1478 DSPTKLLEREDSFFSQ 1493 (1513)
Q Consensus 1478 Gtp~eLl~~~~~~f~~ 1493 (1513)
|+++++..++...|.+
T Consensus 231 ~~~~~~~~~~~~~~~~ 246 (253)
T TIGR02323 231 GLTDQVLDDPQHPYTQ 246 (253)
T ss_pred CCHHHHhcCCCCHHHH
Confidence 9999998765444443
No 336
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-37 Score=345.17 Aligned_cols=201 Identities=28% Similarity=0.495 Sum_probs=174.7
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------- 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------- 696 (1513)
.++++|++|+|+++ .++|+|+|++|++|+.++|+|+||||||||++.+.|.++|.+|+|.++|.
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 47899999999764 68999999999999999999999999999999999999999999999884
Q ss_pred EEEEcCCC--cccCccHHHHHccCCC---CCc----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHH
Q 000432 697 KAYVPQSP--WILTGNIRENILFGNQ---YDS----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQI 767 (1513)
Q Consensus 697 ~ayv~Q~~--~l~~~ti~eNI~fg~~---~~~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~l 767 (1513)
+|||.|+| .+|..||.|.+.||.. .++ ++.+++++.|++.+..+. ...+|||||||||||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r-----------~p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDR-----------PPFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccC-----------CccccCCcceeeHHh
Confidence 69999999 8999999999999964 333 334556666666554333 346899999999999
Q ss_pred HHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-C-CcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000432 768 ARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-K-DKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLK 844 (1513)
Q Consensus 768 ARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~-~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~ 844 (1513)
|.+|..+|+++|||||||+||+...+.+.+ .++.+. . ++|+|++||+++.+.. ||++++|++|+++.+|+++++.+
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~-~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~ 228 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLE-LLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFN 228 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHH-HHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhh
Confidence 999999999999999999999999888875 455553 3 5899999999999776 99999999999999999988876
Q ss_pred c
Q 000432 845 Q 845 (1513)
Q Consensus 845 ~ 845 (1513)
.
T Consensus 229 ~ 229 (235)
T COG1122 229 D 229 (235)
T ss_pred h
Confidence 4
No 337
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-34 Score=320.81 Aligned_cols=505 Identities=16% Similarity=0.169 Sum_probs=328.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcchhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Q 000432 305 YKAIFFFIRKKAAINASFAVINAATSYVGPYLINDFVNFLTDKKSRSLESGYLLALAFLGAKMVE-TIAQRQWIFGARQL 383 (1513)
Q Consensus 305 ~~~l~~~~~~~~~~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~~g~~l~~~l~~~~~~~-~~~~~~~~~~~~~~ 383 (1513)
.-.++|.+++.++....+.++... ++..++..+-+++-......... +.+.++++...++. .+.+.- ...+
T Consensus 4 ll~llr~nr~~~i~~~a~s~a~g~---~g~~lLa~in~al~e~~~~~~~~-l~~f~~llllf~~ss~is~lg----~t~~ 75 (546)
T COG4615 4 LLLLLRQNRWPFISVMALSLASGA---LGIGLLAFINQALIETADTSLLV-LPEFLGLLLLFMVSSLISQLG----LTTL 75 (546)
T ss_pred HHHHhcccccHHHHHHHHHHHHHH---HHHHHHHHHHHHHHhhcccceee-HHHHHHHHHHHHHHHHHHHHH----HHHH
Confidence 345677788777665555544443 33334433334443222221111 11122222222222 222222 2334
Q ss_pred HHHHHHHHHHHHHHHHhcCCcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 000432 384 GLRLRAALISHLYRKGLHLSSQSRQSHTSGEIINYMSVDVQRISDFIFYSNYMFMLPVQISLAIYILRTNLGLGSLAALA 463 (1513)
Q Consensus 384 ~~~ir~~L~~~iy~K~L~l~~~~~~~~~~G~i~nl~s~D~~~i~~~~~~~~~~~~~pl~i~~~l~~L~~~lg~~~l~~l~ 463 (1513)
|.+.-..++..+.+|.+.-+....++.+++.++..++.|+..|.-.+..+..+....+.+..++..|+..-+.+.+..++
T Consensus 76 gq~~I~klr~~~~~kil~tplerier~~~~rlla~L~~Dvr~ISf~~s~lp~~~qa~il~l~s~aYLayLSp~mf~l~vV 155 (546)
T COG4615 76 GQHFIYKLRSEFIKKILDTPLERIERLGSARLLAGLTSDVRNISFAFSRLPELVQAIILTLGSAAYLAYLSPKMFLLTVV 155 (546)
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHhcccchhhhhcccccceeehHhhhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 55555555566677777777777777889999999999999998555555544444433444445555444455556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhchhH--HHHHHH-HHHHHHHHHHHHHHHHHHHH
Q 000432 464 ATLTVMTCNIPITRIQKRFQSKIMDAKDNRMRATSEVLKNMKTLKLQAWDT--RFLQKL-ESLRQVECIWLWKSLRLSAT 540 (1513)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gir~IK~~~~E~--~f~~~i-~~~R~~E~~~~~~~~~~~~~ 540 (1513)
.+++.+..+....++..+...+..+..|+-.+..+.++.|-|.+|+..-.. .+.+.+ .+.++.+. ...+...+
T Consensus 156 ~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~a~~~r~----~~~~~n~f 231 (546)
T COG4615 156 WIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPDAQEYRH----HIIRANTF 231 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcchHHHHh----hhhhhhHH
Confidence 666666666666666666666778888999999999999999999865322 122222 22222221 11122222
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHHhccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccc
Q 000432 541 S-AFIFWGSPTFISVVTFGACMLLGIQ-LTAGRVLSALATFRMLQDPIFNLPDLLSNIAQGKVSADRIAAYLQEDEIQRD 618 (1513)
Q Consensus 541 ~-~~~~~~~p~~v~~~~f~~~~~~~~~-Lt~~~~ft~l~l~~~L~~pl~~lp~~i~~~~~a~vs~~RI~~fL~~~e~~~~ 618 (1513)
. ....|...++.+++....|+...-. -+...+.|+....-.++.|+.++...++.+.+|.++++||.++-..|+..+-
T Consensus 232 ~~la~~~~ni~l~~lIGlvf~lal~~~w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~kiakle~~~~~a~~ 311 (546)
T COG4615 232 HLLAVNWSNIMLLGLIGLVFWLALSLGWASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFNKIAKLELAPYKADF 311 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHHHHHHhhcCCccccC
Confidence 1 2334555555555554444433321 1223445555556678999999999999999999999999998765543322
Q ss_pred cccccCCCCCcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCeE-
Q 000432 619 AVEYVPKGRSEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGTK- 697 (1513)
Q Consensus 619 ~~~~~~~~~~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~~- 697 (1513)
..+ .+. +.-..++++|+.|+|++. ..-+..||++|++||++-|+|.|||||||+++++.|++.|++|+|.+||+.
T Consensus 312 ~~~-q~~-p~~~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV 387 (546)
T COG4615 312 PRP-QAF-PDWKTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPV 387 (546)
T ss_pred CCC-CcC-CcccceeeeeeeeccCcc--cceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccCCCCCceeECCccC
Confidence 111 111 123479999999999864 377899999999999999999999999999999999999999999999964
Q ss_pred ------------EEEcCCCcccCccHHHHHccCCC-CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHH
Q 000432 698 ------------AYVPQSPWILTGNIRENILFGNQ-YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQR 764 (1513)
Q Consensus 698 ------------ayv~Q~~~l~~~ti~eNI~fg~~-~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqR 764 (1513)
+-|.-+-|+|..++ -++. -.++..++-++..++....+ +.+|--+ ...||-|||.|
T Consensus 388 ~~e~ledYR~LfSavFsDyhLF~~ll-----~~e~~as~q~i~~~LqrLel~~kts-l~d~~fs-----~~kLStGQkKR 456 (546)
T COG4615 388 SAEQLEDYRKLFSAVFSDYHLFDQLL-----GPEGKASPQLIEKWLQRLELAHKTS-LNDGRFS-----NLKLSTGQKKR 456 (546)
T ss_pred CCCCHHHHHHHHHHHhhhHhhhHhhh-----CCccCCChHHHHHHHHHHHHhhhhc-ccCCccc-----ccccccchHHH
Confidence 23444556665433 1222 23444455455444443322 2333222 24799999999
Q ss_pred HHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCccccCCEEEEEeCCeEEEe
Q 000432 765 IQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGI-LKDKSVLYVTHQVEFLPAADIILVMENGRIAQA 836 (1513)
Q Consensus 765 i~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~-~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~ 836 (1513)
+|+--|++-+.|||+|||=-+--||+=.+..++..+-.+ ..|||++.|||+-.+...|||++.|++|+++|.
T Consensus 457 lAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 457 LALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred HHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHHHHhcCceeec
Confidence 999999999999999999999999999777776655333 259999999999999999999999999999874
No 338
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=7e-37 Score=338.40 Aligned_cols=185 Identities=26% Similarity=0.349 Sum_probs=163.9
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcc--CCCCCcEEEEcCeeCCCCChHHh-hhc
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRI--VEPTMGSIIIDNVDITKIGLHDL-RSR 1338 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl--~ep~~G~I~IDGvdI~~i~l~~L-R~~ 1338 (1513)
++++|++++|++ .++|+|+||++++||.+||+|++|||||||+++|.|+ ++|++|+|.+||.++.+.+.... |.+
T Consensus 1 l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (200)
T cd03217 1 LEIKDLHVSVGG--KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLG 78 (200)
T ss_pred CeEEEEEEEeCC--EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCc
Confidence 478999999974 3599999999999999999999999999999999999 58999999999999998887654 566
Q ss_pred eEEEcCCCccccC-cHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCC
Q 000432 1339 LGIIPQDPTLFDG-TVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKS 1417 (1513)
Q Consensus 1339 isiVpQdp~LF~g-TIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~ 1417 (1513)
++|+||+|.+|.+ |+++|+ .. ...+||||||||++||||++++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~l------------------------~~-----------~~~~LS~G~~qrv~laral~~~p 123 (200)
T cd03217 79 IFLAFQYPPEIPGVKNADFL------------------------RY-----------VNEGFSGGEKKRNEILQLLLLEP 123 (200)
T ss_pred EEEeecChhhccCccHHHHH------------------------hh-----------ccccCCHHHHHHHHHHHHHhcCC
Confidence 9999999999976 555554 00 12479999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh--hcCEEEEEeCCEEeEecChhHHH
Q 000432 1418 SILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVI--DSDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1418 ~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~--~~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
+||+|||||++||.++...+.+.|++.. +++|+|+++|+++.+. .||+|++|++|++++.| +.|+.
T Consensus 124 ~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~-~~~~~ 192 (200)
T cd03217 124 DLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSG-DKELA 192 (200)
T ss_pred CEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEc-cHHHH
Confidence 9999999999999999999999998764 3789999999999998 59999999999999999 55664
No 339
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=3e-37 Score=348.28 Aligned_cols=203 Identities=26% Similarity=0.347 Sum_probs=169.2
Q ss_pred EEEEEEEEEEcCC--CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC---CCCcEEEEcCeeCCCCChHHhh
Q 000432 1262 ISFHNLQIRYAEH--LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE---PTMGSIIIDNVDITKIGLHDLR 1336 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~--~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e---p~~G~I~IDGvdI~~i~l~~LR 1336 (1513)
++|+||+++|+.. .+++|+|+||+|++||++||+|++|||||||+++|.|+++ |++|+|.+||.++. ...+|
T Consensus 4 ~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~~ 80 (226)
T cd03234 4 LPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQFQ 80 (226)
T ss_pred ceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHhc
Confidence 5799999999765 3679999999999999999999999999999999999999 99999999999885 34678
Q ss_pred hceEEEcCCCccccC-cHhhccCCCC-----CCCHH-----HHHH-HHHHcCCcHHHHhhhccccchhccCCCCCChhHH
Q 000432 1337 SRLGIIPQDPTLFDG-TVRGNLDPLV-----QYSDK-----QVWE-ALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQR 1404 (1513)
Q Consensus 1337 ~~isiVpQdp~LF~g-TIR~NLdp~~-----~~sde-----ei~~-aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQR 1404 (1513)
++++++||++.+|.+ |+++|+.... ...++ .+.+ .++..++ +........+||+|||
T Consensus 81 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~ 149 (226)
T cd03234 81 KCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLAL-----------TRIGGNLVKGISGGER 149 (226)
T ss_pred ccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhhcc-----------hhhhcccccCcCHHHH
Confidence 999999999999987 9999996421 11111 1111 2333332 2222344568999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccCh-hhH-hhcCEEEEEeCCEEeEec
Q 000432 1405 QLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRI-HTV-IDSDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1405 Qrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl-~ti-~~~DrIlVLd~G~IvE~G 1478 (1513)
||++||||++++|+||+|||||++||+.+...+.+.|++.. +++|+|+++|++ ..+ ..||+|++|++|++++.|
T Consensus 150 qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 150 RRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999999999999999999999999998764 478999999998 355 459999999999999876
No 340
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-37 Score=353.39 Aligned_cols=208 Identities=22% Similarity=0.351 Sum_probs=176.7
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhh-hce
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLR-SRL 1339 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR-~~i 1339 (1513)
.|+++||+++|+++ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.. ..+ +++
T Consensus 6 ~l~~~~l~~~~~~~-~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~----~~~~~~i 80 (272)
T PRK15056 6 GIVVNDVTVTWRNG-HTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ----ALQKNLV 80 (272)
T ss_pred eEEEEeEEEEecCC-cEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH----hhccceE
Confidence 59999999999643 359999999999999999999999999999999999999999999999998752 233 469
Q ss_pred EEEcCCCcc---ccCcHhhccCCC--C---------CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHH
Q 000432 1340 GIIPQDPTL---FDGTVRGNLDPL--V---------QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQ 1405 (1513)
Q Consensus 1340 siVpQdp~L---F~gTIR~NLdp~--~---------~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQ 1405 (1513)
+|+||+|.+ +..++++|+... . ...++++.++++..++.+.. |+.+ .+|||||||
T Consensus 81 ~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-------~~~~----~~LSgG~~q 149 (272)
T PRK15056 81 AYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFR-------HRQI----GELSGGQKK 149 (272)
T ss_pred EEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHh-------cCCc----ccCCHHHHH
Confidence 999999975 456899997521 0 11234567788888886553 3333 469999999
Q ss_pred HHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHH
Q 000432 1406 LFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKL 1483 (1513)
Q Consensus 1406 rl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eL 1483 (1513)
|++|||||+++|+||+|||||++||+++.+.+.+.|++.. +++|||+|+|+++.+.. ||+++++ +|++++.|+++++
T Consensus 150 rv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~ 228 (272)
T PRK15056 150 RVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETT 228 (272)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhc
Confidence 9999999999999999999999999999999999998764 47899999999998865 9999777 8999999999998
Q ss_pred Hh
Q 000432 1484 LE 1485 (1513)
Q Consensus 1484 l~ 1485 (1513)
.+
T Consensus 229 ~~ 230 (272)
T PRK15056 229 FT 230 (272)
T ss_pred cC
Confidence 64
No 341
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.6e-37 Score=339.02 Aligned_cols=190 Identities=26% Similarity=0.323 Sum_probs=162.3
Q ss_pred eEEEEEEEEEEcCC--CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCC---CCCcEEEEcCeeCCCCChHHh
Q 000432 1261 TISFHNLQIRYAEH--LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVE---PTMGSIIIDNVDITKIGLHDL 1335 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~--~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~e---p~~G~I~IDGvdI~~i~l~~L 1335 (1513)
.+.++||+|.|+.. ..++|+|+||+|++||++||+|++|||||||+++|.|+++ |++|+|.+||.++...+ ...
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 46899999999753 4579999999999999999999999999999999999999 89999999999998765 457
Q ss_pred hhceEEEcCCCccccC-cHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHc
Q 000432 1336 RSRLGIIPQDPTLFDG-TVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLL 1414 (1513)
Q Consensus 1336 R~~isiVpQdp~LF~g-TIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALL 1414 (1513)
|++++++||++.+|.+ |+++||...... . .+ +....||+|||||++||||++
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~---------~--------------~~----~~~~~LS~Ge~qrl~laral~ 134 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALRC---------K--------------GN----EFVRGISGGERKRVSIAEALV 134 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhhh---------c--------------cc----cchhhCCHHHHHHHHHHHHHh
Confidence 8899999999988875 999999642110 0 12 233579999999999999999
Q ss_pred cCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEec-cChhhHh-hcCEEEEEeCCEEeEec
Q 000432 1415 KKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIA-HRIHTVI-DSDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1415 r~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IA-HRl~ti~-~~DrIlVLd~G~IvE~G 1478 (1513)
++|+||+|||||++||+++.+.+.+.|++..+ ++|+|+++ |+.+.+. .||+|++|++|++++.|
T Consensus 135 ~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 135 SRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred hCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 99999999999999999999999999998654 46766654 5566664 59999999999999865
No 342
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-36 Score=358.51 Aligned_cols=209 Identities=24% Similarity=0.407 Sum_probs=170.8
Q ss_pred cceEEEEeEEEEeCCCC--CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC-----------
Q 000432 629 EFEVEVVNGKFSWNPES--SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG----------- 695 (1513)
Q Consensus 629 ~~~I~~~~~sf~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g----------- 695 (1513)
+..|+++|++|+|+... ..++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 19 ~~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~ 98 (320)
T PRK13631 19 DIILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHE 98 (320)
T ss_pred CceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccc
Confidence 34699999999997421 24699999999999999999999999999999999999999999999875
Q ss_pred ------------------eEEEEcCCC--cccCccHHHHHccCCC---CCchHHHHHHHHHhcHHHHhhccCCCC-cccc
Q 000432 696 ------------------TKAYVPQSP--WILTGNIRENILFGNQ---YDSCKYDRTVEACALVKDFELFASGDL-TEIG 751 (1513)
Q Consensus 696 ------------------~~ayv~Q~~--~l~~~ti~eNI~fg~~---~~~~~~~~v~~~~~l~~d~~~l~~Gd~-T~Ig 751 (1513)
.++||+|+| ++|+.||+|||.|+.. .+.+...+ ++..+ ++.+ |.. ...+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~--~~~~~---l~~~--gL~~~~~~ 171 (320)
T PRK13631 99 LITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK--LAKFY---LNKM--GLDDSYLE 171 (320)
T ss_pred ccccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH--HHHHH---HHHc--CCChhHhc
Confidence 158999998 7999999999998742 12221111 11111 2222 221 2356
Q ss_pred CCCCCCChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCccc-cCCEEEEEe
Q 000432 752 ERGINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGI-LKDKSVLYVTHQVEFLP-AADIILVME 829 (1513)
Q Consensus 752 e~g~~LSGGQkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~-~~~~TvilvtH~~~~l~-~~d~i~vl~ 829 (1513)
..+.+||||||||++||||+.++|+++|||||||+||+.+.+.+++ .+..+ .+++|+|+|||+++.+. .||+|++|+
T Consensus 172 ~~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~-~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~ 250 (320)
T PRK13631 172 RSPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQ-LILDAKANNKTVFVITHTMEHVLEVADEVIVMD 250 (320)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHH-HHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEE
Confidence 7788999999999999999999999999999999999999887764 55544 35899999999999874 599999999
Q ss_pred CCeEEEecChHHHHhc
Q 000432 830 NGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 830 ~G~i~~~g~~~~l~~~ 845 (1513)
+|++++.|+++++.+.
T Consensus 251 ~G~i~~~g~~~~~~~~ 266 (320)
T PRK13631 251 KGKILKTGTPYEIFTD 266 (320)
T ss_pred CCEEEEeCCHHHHhcC
Confidence 9999999999998764
No 343
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.7e-37 Score=342.53 Aligned_cols=200 Identities=25% Similarity=0.373 Sum_probs=170.5
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCC----ChHHhhh
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKI----GLHDLRS 1337 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i----~l~~LR~ 1337 (1513)
+++ ||+++|+.. .+ |+||+|++ |.+||+|++|||||||+++|.|+++|++|+|.+||.++... +...+|+
T Consensus 2 ~~~-~l~~~~~~~--~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 75 (214)
T cd03297 2 LCV-DIEKRLPDF--TL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQR 75 (214)
T ss_pred cee-eeeEecCCe--ee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhh
Confidence 345 899999763 24 99999999 99999999999999999999999999999999999998643 3346788
Q ss_pred ceEEEcCCCcccc-CcHhhccCCC-CCC----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHH
Q 000432 1338 RLGIIPQDPTLFD-GTVRGNLDPL-VQY----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGR 1411 (1513)
Q Consensus 1338 ~isiVpQdp~LF~-gTIR~NLdp~-~~~----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LAR 1411 (1513)
+++++||++.+|. .|+++|+... ..+ .++++.++++..++.+.. .....+||||||||++|||
T Consensus 76 ~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~ 144 (214)
T cd03297 76 KIGLVFQQYALFPHLNVRENLAFGLKRKRNREDRISVDELLDLLGLDHLL-----------NRYPAQLSGGEKQRVALAR 144 (214)
T ss_pred cEEEEecCCccCCCCCHHHHHHHHHhhCCHHHHHHHHHHHHHHcCCHhHh-----------hcCcccCCHHHHHHHHHHH
Confidence 9999999999986 5999999642 111 234566777777765433 3345689999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEec
Q 000432 1412 TLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1412 ALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~G 1478 (1513)
|++++|+||+|||||++||.++.+.+.+.|++..+ ++|+|+|+|+++.+.. ||+|++|++|++++.|
T Consensus 145 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 145 ALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999988643 7899999999999865 9999999999999875
No 344
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=6.1e-37 Score=337.08 Aligned_cols=182 Identities=29% Similarity=0.428 Sum_probs=161.8
Q ss_pred eEEEEEEEEEEcCC----CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccC--CCCCcEEEEcCeeCCCCChHH
Q 000432 1261 TISFHNLQIRYAEH----LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIV--EPTMGSIIIDNVDITKIGLHD 1334 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~----~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~--ep~~G~I~IDGvdI~~i~l~~ 1334 (1513)
.|+++||+++|+.. ..++|+|+||+|++||++||+|++|||||||+++|.|++ +|++|+|.+||.++.. ..
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 58999999999752 246999999999999999999999999999999999999 9999999999999875 36
Q ss_pred hhhceEEEcCCCccccC-cHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1335 LRSRLGIIPQDPTLFDG-TVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1335 LR~~isiVpQdp~LF~g-TIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+|++++++||++.+|.+ |+++|+.... .. + .||+|||||++||||+
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~~~------------~~-------------~--------~LS~G~~qrv~laral 126 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMFAA------------KL-------------R--------GLSGGERKRVSIALEL 126 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHHHH------------Hh-------------c--------cCCHHHHHHHHHHHHH
Confidence 78899999999998875 9999985210 00 0 7999999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChh-hHhh-cCEEEEEeCCEEeEec
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIH-TVID-SDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~-ti~~-~DrIlVLd~G~IvE~G 1478 (1513)
+++|++++|||||++||..+.+.+.+.|++.. +++|+|+++|+++ .+.+ ||+|++|++|++++.|
T Consensus 127 ~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 127 VSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred HcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 99999999999999999999999999998865 4799999999997 4544 9999999999998765
No 345
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-37 Score=318.75 Aligned_cols=212 Identities=28% Similarity=0.411 Sum_probs=184.9
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
+++.+++.+|++ ...+++||||+++.||.+||.|++||||||+++.|..++.|++|+|+|||+|+.+. +...|++||+
T Consensus 2 l~v~~l~K~y~~-~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~-p~~vrr~IGV 79 (245)
T COG4555 2 LEVTDLTKSYGS-KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRD-PSFVRRKIGV 79 (245)
T ss_pred eeeeehhhhccC-HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccC-hHHHhhhcce
Confidence 678999999986 33489999999999999999999999999999999999999999999999999885 5678999999
Q ss_pred EcCCCcccc-CcHhhccCCCC---CCCHH----HHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHH
Q 000432 1342 IPQDPTLFD-GTVRGNLDPLV---QYSDK----QVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1342 VpQdp~LF~-gTIR~NLdp~~---~~sde----ei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
++-+.-|+. -|.||||.++. +.++. ++.+.-+.-++.+.. |..++ +||-|+|||++|||||
T Consensus 80 l~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~-------~rRv~----~~S~G~kqkV~iARAl 148 (245)
T COG4555 80 LFGERGLYARLTARENLKYFARLNGLSRKEIKARIAELSKRLQLLEYL-------DRRVG----EFSTGMKQKVAIARAL 148 (245)
T ss_pred ecCCcChhhhhhHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHH-------HHHHh----hhchhhHHHHHHHHHH
Confidence 997776775 49999997653 33333 445555555655543 44554 5899999999999999
Q ss_pred ccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccChhhHh-hcCEEEEEeCCEEeEecChhHHHhc
Q 000432 1414 LKKSSILVLDEATASVDSATDGVIQKIISQEFK-DRTVVTIAHRIHTVI-DSDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1414 Lr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~-~~TvI~IAHRl~ti~-~~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
.++|+|+|||||||+||.-|.+.+++-|++... +++||+-+|-++.++ -||||+++++|+++..|+++++.++
T Consensus 149 vh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 149 VHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred hcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 999999999999999999999999999988764 999999999999999 4999999999999999999999875
No 346
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-37 Score=363.79 Aligned_cols=202 Identities=26% Similarity=0.416 Sum_probs=169.6
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-----------EEE
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-----------KAY 699 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-----------~ay 699 (1513)
.++++|++++|+. +.++|+|+||++++|++++|+|||||||||||++|+|+.+|++|+|.++|. ++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 80 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPADRDIAM 80 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 4889999999942 257999999999999999999999999999999999999999999999984 699
Q ss_pred EcCCCcccC-ccHHHHHccCCCC---Cc----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHH
Q 000432 700 VPQSPWILT-GNIRENILFGNQY---DS----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAV 771 (1513)
Q Consensus 700 v~Q~~~l~~-~ti~eNI~fg~~~---~~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal 771 (1513)
|+|++.+|. .||+|||.|+... +. ++.+++++..++.+.. .....+|||||||||+||||+
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LSgGq~QRvalARAL 149 (356)
T PRK11650 81 VFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLL-----------DRKPRELSGGQRQRVAMGRAI 149 (356)
T ss_pred EeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHh-----------hCChhhCCHHHHHHHHHHHHH
Confidence 999999995 6999999998532 22 1223344444443322 334468999999999999999
Q ss_pred hcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHHHHhcC
Q 000432 772 YQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILK--DKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEELLKQN 846 (1513)
Q Consensus 772 ~~~~~illLDep~salD~~~~~~i~~~~~~~~~~--~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~l~~~~ 846 (1513)
+.+|+++|||||||+||+.+.+++.+. ++.+.+ +.|+|+|||+++.+. .||+|++|++|++++.|+++++.++.
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~~-l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~p 226 (356)
T PRK11650 150 VREPAVFLFDEPLSNLDAKLRVQMRLE-IQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEKP 226 (356)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhCC
Confidence 999999999999999999998888654 554433 789999999998765 59999999999999999999997653
No 347
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=6.7e-37 Score=333.54 Aligned_cols=172 Identities=26% Similarity=0.468 Sum_probs=157.1
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCh-HHhhhce
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGL-HDLRSRL 1339 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l-~~LR~~i 1339 (1513)
.|+++|++++| +|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++.+.+. ...|+++
T Consensus 4 ~l~~~~l~~~~------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (182)
T cd03215 4 VLEVRGLSVKG------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAGI 77 (182)
T ss_pred EEEEeccEEEe------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCCe
Confidence 48999999999 8999999999999999999999999999999999999999999999999998874 4568899
Q ss_pred EEEcCCC----ccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHcc
Q 000432 1340 GIIPQDP----TLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLK 1415 (1513)
Q Consensus 1340 siVpQdp----~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr 1415 (1513)
+|+||++ .++..|+++|+..... ||+|||||++||||+++
T Consensus 78 ~~~~q~~~~~~~~~~~t~~e~l~~~~~------------------------------------LS~G~~qrl~la~al~~ 121 (182)
T cd03215 78 AYVPEDRKREGLVLDLSVAENIALSSL------------------------------------LSGGNQQKVVLARWLAR 121 (182)
T ss_pred EEecCCcccCcccCCCcHHHHHHHHhh------------------------------------cCHHHHHHHHHHHHHcc
Confidence 9999995 3445799999864210 99999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEE
Q 000432 1416 KSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRI 1474 (1513)
Q Consensus 1416 ~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~I 1474 (1513)
+|+||+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.+ ||+|++|++|++
T Consensus 122 ~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 122 DPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred CCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 999999999999999999999999998764 47999999999999987 999999999975
No 348
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=6.3e-37 Score=362.20 Aligned_cols=202 Identities=24% Similarity=0.385 Sum_probs=167.7
Q ss_pred EEEEeEEEEeCCCC-CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------------
Q 000432 632 VEVVNGKFSWNPES-SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------- 696 (1513)
Q Consensus 632 I~~~~~sf~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------- 696 (1513)
|+++|++++|+..+ ..++|+|+||+|++||+++|+|+||||||||+++|.|+.+|++|+|.++|.
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 347999999999999999999999999999999999999999999999873
Q ss_pred --EEEEcCCCcccC-ccHHHHHccCCC---CCchH-H---HHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHH
Q 000432 697 --KAYVPQSPWILT-GNIRENILFGNQ---YDSCK-Y---DRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQ 766 (1513)
Q Consensus 697 --~ayv~Q~~~l~~-~ti~eNI~fg~~---~~~~~-~---~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~ 766 (1513)
++|++|++.++. .|++|||.|+.. .+.+. . .+.++..++.+ ........|||||||||+
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~-----------~~~~~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGD-----------KHDSYPSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-----------hhhCChhhCCHHHHHHHH
Confidence 699999999995 699999998642 22221 1 22222222221 223455789999999999
Q ss_pred HHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHH
Q 000432 767 IARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILK--DKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELL 843 (1513)
Q Consensus 767 lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~--~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~ 843 (1513)
||||+.++|+++|||||||+||+.+.+.+.+ .++.+.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~-lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILE-LLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIF 229 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 9999999999999999999999999888864 5555533 7999999999999865 9999999999999999999997
Q ss_pred hc
Q 000432 844 KQ 845 (1513)
Q Consensus 844 ~~ 845 (1513)
..
T Consensus 230 ~~ 231 (343)
T TIGR02314 230 SH 231 (343)
T ss_pred cC
Confidence 54
No 349
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=1.8e-36 Score=347.83 Aligned_cols=212 Identities=20% Similarity=0.244 Sum_probs=179.0
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhcc--CCCCCcEEEEcCeeCCCCChHHhhh-
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRI--VEPTMGSIIIDNVDITKIGLHDLRS- 1337 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl--~ep~~G~I~IDGvdI~~i~l~~LR~- 1337 (1513)
.|+++||+++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+ ++|++|+|.+||.++..++.+..++
T Consensus 7 ~l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 84 (252)
T CHL00131 7 ILEIKNLHASVNE--NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAHL 84 (252)
T ss_pred eEEEEeEEEEeCC--EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhee
Confidence 4999999999964 2599999999999999999999999999999999998 6899999999999999888766554
Q ss_pred ceEEEcCCCccccC-cHhhccCCC-C---------CCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChh
Q 000432 1338 RLGIIPQDPTLFDG-TVRGNLDPL-V---------QYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVG 1402 (1513)
Q Consensus 1338 ~isiVpQdp~LF~g-TIR~NLdp~-~---------~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgG 1402 (1513)
.++++||+|.+|.+ |+++|+... . +.+ .+++.++++.+++.+. .++..+. ..||||
T Consensus 85 ~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~------~~~~~~~---~~LSgG 155 (252)
T CHL00131 85 GIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPS------FLSRNVN---EGFSGG 155 (252)
T ss_pred eEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchh------hhccccc---cCCCHH
Confidence 58999999999986 789987531 1 011 1345667777776521 1222222 259999
Q ss_pred HHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh--cCEEEEEeCCEEeEecC
Q 000432 1403 QRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID--SDLVLVLSDGRIAEYDS 1479 (1513)
Q Consensus 1403 QRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~--~DrIlVLd~G~IvE~Gt 1479 (1513)
||||++||||++++|+||||||||++||.++...+.+.|++.. +++|+|+++|+++.+.. ||+|++|++|++++.|+
T Consensus 156 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~~~ 235 (252)
T CHL00131 156 EKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKTGD 235 (252)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEecC
Confidence 9999999999999999999999999999999999999998765 47999999999999876 89999999999999999
Q ss_pred hhHH
Q 000432 1480 PTKL 1483 (1513)
Q Consensus 1480 p~eL 1483 (1513)
|+++
T Consensus 236 ~~~~ 239 (252)
T CHL00131 236 AELA 239 (252)
T ss_pred hhhh
Confidence 9843
No 350
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=1.5e-36 Score=325.40 Aligned_cols=164 Identities=27% Similarity=0.357 Sum_probs=151.4
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|+.+ +++|+|+||+|++||++||+|++|||||||+++|+|+++|++|+|.++|. ++++|
T Consensus 1 i~~~~~~~~~~~~-~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~~ 68 (166)
T cd03223 1 IELENLSLATPDG-RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLLF 68 (166)
T ss_pred CEEEEEEEEcCCC-CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEEE
Confidence 5789999999644 45999999999999999999999999999999999999999999999983 68999
Q ss_pred EcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEE
Q 000432 1342 IPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILV 1421 (1513)
Q Consensus 1342 VpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILi 1421 (1513)
+||+|.++++|+++|+... ....||||||||++||||++++|++++
T Consensus 69 ~~q~~~~~~~tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~ll 114 (166)
T cd03223 69 LPQRPYLPLGTLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVF 114 (166)
T ss_pred ECCCCccccccHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEE
Confidence 9999999999999999642 246899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhhcCEEEEEeCCE
Q 000432 1422 LDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVIDSDLVLVLSDGR 1473 (1513)
Q Consensus 1422 LDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~ 1473 (1513)
|||||++||.++.+.+.+.|++. ++|+|+++|+++....||+|++|++|-
T Consensus 115 lDEPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 115 LDEATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred EECCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 99999999999999999999886 689999999999888899999999864
No 351
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=2e-36 Score=339.75 Aligned_cols=198 Identities=45% Similarity=0.827 Sum_probs=177.5
Q ss_pred EEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC-----------------
Q 000432 633 EVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG----------------- 695 (1513)
Q Consensus 633 ~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g----------------- 695 (1513)
.+.|++|+|+.+ .++++|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 467899999753 5799999999999999999999999999999999999999999999866
Q ss_pred eEEEEcCCCcccCccHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCC
Q 000432 696 TKAYVPQSPWILTGNIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDA 775 (1513)
Q Consensus 696 ~~ayv~Q~~~l~~~ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~ 775 (1513)
.++|++|+|.+++.|++||+.++.+.+.++.+++++++++.+.++.+|.|++|.++....+||||||||++||||++.+|
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p 159 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSPFNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQNT 159 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCcCCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhCC
Confidence 26899999999999999999988766666677888999998888889999999999999999999999999999999999
Q ss_pred CEEEeeCcCCCCCHHHHHHHHHH-HHhhhc-CCcEEEEEccCCCccccCCEEEEEeCCe
Q 000432 776 DIYLLDDPFSAVDAHTGTQLFKD-CLMGIL-KDKSVLYVTHQVEFLPAADIILVMENGR 832 (1513)
Q Consensus 776 ~illLDep~salD~~~~~~i~~~-~~~~~~-~~~TvilvtH~~~~l~~~d~i~vl~~G~ 832 (1513)
+++||||||++||+.+.+.+.+. .++.+. .++|+|++||+.+.++.||++++|++|+
T Consensus 160 ~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 160 NIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999998877663 444433 3789999999999988899999999884
No 352
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.2e-37 Score=335.26 Aligned_cols=181 Identities=24% Similarity=0.348 Sum_probs=160.6
Q ss_pred eEEEEEEEEEEcCC--CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccC--CCCCcEEEEcCeeCCCCChHHhh
Q 000432 1261 TISFHNLQIRYAEH--LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIV--EPTMGSIIIDNVDITKIGLHDLR 1336 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~--~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~--ep~~G~I~IDGvdI~~i~l~~LR 1336 (1513)
.|+++|++++|++. ..++|+|+||+|++||++||+|++|||||||+++|.|++ +|++|+|.+||.++. ..+|
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 58999999999752 246999999999999999999999999999999999986 489999999999986 5678
Q ss_pred hceEEEcCCCccccC-cHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHcc
Q 000432 1337 SRLGIIPQDPTLFDG-TVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLK 1415 (1513)
Q Consensus 1337 ~~isiVpQdp~LF~g-TIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr 1415 (1513)
++++++||+|.+|.+ |+++|+... ..++ +||||||||++||||+++
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~---------~~~~------------------------~LSgGe~qrv~la~al~~ 125 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFS---------ALLR------------------------GLSVEQRKRLTIGVELAA 125 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHH---------HHHh------------------------cCCHHHhHHHHHHHHHhc
Confidence 899999999988875 999998631 0000 799999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh-H-hhcCEEEEEeC-CEEeEec
Q 000432 1416 KSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHT-V-IDSDLVLVLSD-GRIAEYD 1478 (1513)
Q Consensus 1416 ~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~t-i-~~~DrIlVLd~-G~IvE~G 1478 (1513)
+|++|+|||||+++|.++...+.+.|++.. +++|+|+|+|+++. + ..||+|++|++ |++++.|
T Consensus 126 ~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 126 KPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred CCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 999999999999999999999999998764 47999999999984 4 56999999999 9999876
No 353
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=5.8e-37 Score=364.24 Aligned_cols=192 Identities=27% Similarity=0.379 Sum_probs=161.3
Q ss_pred CCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC-----------------eEEEEcCCCcccC-
Q 000432 647 SPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG-----------------TKAYVPQSPWILT- 708 (1513)
Q Consensus 647 ~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g-----------------~~ayv~Q~~~l~~- 708 (1513)
+++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++| .++||+|++++|+
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 5799999999999999999999999999999999999999999999988 3799999999997
Q ss_pred ccHHHHHccCCCC---Cc-hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCEEEeeCcC
Q 000432 709 GNIRENILFGNQY---DS-CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLLDDPF 784 (1513)
Q Consensus 709 ~ti~eNI~fg~~~---~~-~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~illLDep~ 784 (1513)
.||+|||.|+.++ +. ++.+++.+.+... |..........+|||||||||+|||||+++|+|+||||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~v--------gL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDEP~ 157 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLV--------GLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDEAF 157 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhc--------CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 5999999987543 22 2334444444321 2223355667799999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcc-ccCCEEEEEeCCeEEEecChHHHHhcC
Q 000432 785 SAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFL-PAADIILVMENGRIAQAGRFEELLKQN 846 (1513)
Q Consensus 785 salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l-~~~d~i~vl~~G~i~~~g~~~~l~~~~ 846 (1513)
||||+.+.+.+.+.+..-.. .++|+|+|||+++.+ ..||+|++|++|++++.|++++++++.
T Consensus 158 saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p 221 (363)
T TIGR01186 158 SALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNP 221 (363)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCc
Confidence 99999999888765543322 389999999999986 559999999999999999999998653
No 354
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=8.2e-37 Score=339.86 Aligned_cols=193 Identities=24% Similarity=0.359 Sum_probs=165.8
Q ss_pred EEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCh----HHhhhce
Q 000432 1264 FHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGL----HDLRSRL 1339 (1513)
Q Consensus 1264 f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l----~~LR~~i 1339 (1513)
++||+++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.+++.++. ...|+++
T Consensus 1 i~~l~~~~~~--~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i 78 (206)
T TIGR03608 1 LKNISKKFGD--KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREKL 78 (206)
T ss_pred CcceEEEECC--EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhCe
Confidence 4789999964 359999999999999999999999999999999999999999999999999875542 2467899
Q ss_pred EEEcCCCcccc-CcHhhccCCC---CC----CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHH
Q 000432 1340 GIIPQDPTLFD-GTVRGNLDPL---VQ----YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGR 1411 (1513)
Q Consensus 1340 siVpQdp~LF~-gTIR~NLdp~---~~----~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LAR 1411 (1513)
+++||+|.+|. .|+++|+... .. ..++++.++++..++.+...+ ...+||+|||||++|||
T Consensus 79 ~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~lS~G~~qr~~lar 147 (206)
T TIGR03608 79 GYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKLKQ-----------KIYELSGGEQQRVALAR 147 (206)
T ss_pred eEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhhcC-----------ChhhCCHHHHHHHHHHH
Confidence 99999999997 6999999642 11 124567778888887554322 23579999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEE
Q 000432 1412 TLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVIDSDLVLVL 1469 (1513)
Q Consensus 1412 ALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~~DrIlVL 1469 (1513)
||+++|++|||||||++||+++.+.+.+.|++.. +++|+|+++|+++.+..||+|++|
T Consensus 148 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 148 AILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred HHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 9999999999999999999999999999998864 478999999999988889999986
No 355
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1.7e-36 Score=342.96 Aligned_cols=206 Identities=23% Similarity=0.335 Sum_probs=172.3
Q ss_pred ceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC----CCcEEEEcCeeCCCCChHHhhhceEEEcCCCc-ccc--
Q 000432 1278 VLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP----TMGSIIIDNVDITKIGLHDLRSRLGIIPQDPT-LFD-- 1350 (1513)
Q Consensus 1278 vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep----~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~-LF~-- 1350 (1513)
+|+|+||+|++||++||+|++|||||||+++|.|+++| ++|+|.+||.++... ...+++++|+||+|. .|.
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~~ 78 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL--SIRGRHIATIMQNPRTAFNPL 78 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh--hhhhheeEEEecCchhhcCcc
Confidence 58999999999999999999999999999999999999 899999999998764 223468999999995 343
Q ss_pred CcHhhccCC----CCC---CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEe
Q 000432 1351 GTVRGNLDP----LVQ---YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLD 1423 (1513)
Q Consensus 1351 gTIR~NLdp----~~~---~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLD 1423 (1513)
-|+.+|+.. .+. ..++++.++++.+++.+. ++.......+||||||||++||||++++|+||+||
T Consensus 79 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLD 150 (230)
T TIGR02770 79 FTMGNHAIETLRSLGKLSKQARALILEALEAVGLPDP--------EEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIAD 150 (230)
T ss_pred cCHHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCch--------HHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 488888731 111 123457888888887631 12233445689999999999999999999999999
Q ss_pred cCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCChHHHH
Q 000432 1424 EATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLEREDSFFSQ 1493 (1513)
Q Consensus 1424 EaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~~~f~~ 1493 (1513)
|||++||.++.+.+.+.|++..+ ++|||+++|+++.+.. ||+|++|++|++++.|+++++...+...|.+
T Consensus 151 EPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~~~~~~~~ 223 (230)
T TIGR02770 151 EPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYNPKHETTR 223 (230)
T ss_pred CCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhCcCCHHHH
Confidence 99999999999999999988653 7899999999999975 9999999999999999999998765454444
No 356
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=1.4e-36 Score=330.33 Aligned_cols=177 Identities=30% Similarity=0.521 Sum_probs=161.6
Q ss_pred EEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEE
Q 000432 1263 SFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGII 1342 (1513)
Q Consensus 1263 ~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiV 1342 (1513)
+++||+++|+. .++|+|+||++++||++||+|++|||||||+++|.|+++|++|+|.+||.++.+.+...+|++++|+
T Consensus 1 ~~~~l~~~~~~--~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~ 78 (180)
T cd03214 1 EVENLSVGYGG--RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAYV 78 (180)
T ss_pred CeeEEEEEECC--eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhHH
Confidence 47899999964 3599999999999999999999999999999999999999999999999999998888899999999
Q ss_pred cCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEE
Q 000432 1343 PQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVL 1422 (1513)
Q Consensus 1343 pQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiL 1422 (1513)
|| +++.+++.++..+ .+.+||+|||||++||||++++|++++|
T Consensus 79 ~q--------------------------~l~~~gl~~~~~~-----------~~~~LS~G~~qrl~laral~~~p~llll 121 (180)
T cd03214 79 PQ--------------------------ALELLGLAHLADR-----------PFNELSGGERQRVLLARALAQEPPILLL 121 (180)
T ss_pred HH--------------------------HHHHcCCHhHhcC-----------CcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 99 7788888765432 3467999999999999999999999999
Q ss_pred ecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEec
Q 000432 1423 DEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1423 DEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~G 1478 (1513)
||||++||.++.+.+.+.|++..+ ++|+|+++|+++.+.+ ||++++|++|++++.|
T Consensus 122 DEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 122 DEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred eCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999999999987654 7899999999999855 9999999999998764
No 357
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-36 Score=345.14 Aligned_cols=199 Identities=30% Similarity=0.402 Sum_probs=163.9
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe---------------
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT--------------- 696 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~--------------- 696 (1513)
++++|++++|+. +++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 468899999963 47999999999999999999999999999999999999999999999772
Q ss_pred -EEEEcCCCcccCc-cHHHHHccCCC----CCchH----HHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHH
Q 000432 697 -KAYVPQSPWILTG-NIRENILFGNQ----YDSCK----YDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQ 766 (1513)
Q Consensus 697 -~ayv~Q~~~l~~~-ti~eNI~fg~~----~~~~~----~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~ 766 (1513)
++||+|++.++.. |++||+.++.. .+.+. ..++++.+++. ........+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLR-----------GAEDLYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCc-----------hhhcCChhhCCHHHHHHHH
Confidence 6899999999876 99999988632 12221 12222222221 1223445689999999999
Q ss_pred HHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHH
Q 000432 767 IARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELL 843 (1513)
Q Consensus 767 lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~ 843 (1513)
||||+.++|+++||||||++||+++.+.+.+ .++.+. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 225 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDD-LIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELR 225 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHH-HHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHc
Confidence 9999999999999999999999999877764 565543 37899999999998765 9999999999999999998886
Q ss_pred hc
Q 000432 844 KQ 845 (1513)
Q Consensus 844 ~~ 845 (1513)
+.
T Consensus 226 ~~ 227 (235)
T cd03261 226 AS 227 (235)
T ss_pred CC
Confidence 54
No 358
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=2.2e-37 Score=320.57 Aligned_cols=215 Identities=27% Similarity=0.443 Sum_probs=184.4
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHH-hhhc
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHD-LRSR 1338 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~-LR~~ 1338 (1513)
+.+..+|+..+|... +|.+||||++++||.||+.||+||||||.+..+.|++.|++|+|.+||.||+.++++. -|-.
T Consensus 3 ~~L~a~~l~K~y~kr--~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 3 STLVAENLAKSYKKR--KVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred cEEEehhhhHhhCCe--eeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 467889999999754 5999999999999999999999999999999999999999999999999999999998 4677
Q ss_pred eEEEcCCCccccC-cHhhccCCCCCCCH---------HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHH
Q 000432 1339 LGIIPQDPTLFDG-TVRGNLDPLVQYSD---------KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFC 1408 (1513)
Q Consensus 1339 isiVpQdp~LF~g-TIR~NLdp~~~~sd---------eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~ 1408 (1513)
|||.||||.+|.+ ||++||.-.-+..+ +++.+.|+.-++. ..-...|..||||||.|+-
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~-----------hlr~~~a~sLSGGERRR~E 149 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHIT-----------HLRDSKAYSLSGGERRRVE 149 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchH-----------HHhcCcccccccchHHHHH
Confidence 9999999999987 99999963222222 1233444444433 2333457899999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh-HhhcCEEEEEeCCEEeEecChhHHHhc
Q 000432 1409 LGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHT-VIDSDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1409 LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~t-i~~~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
|||||..+|+.++||||.|++||-+-..||+.|+... +|--|++.-|.... +.-|||.+++.+|+|...|+|+|+.++
T Consensus 150 IARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 150 IARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred HHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 9999999999999999999999999999999998765 46788999998764 555999999999999999999999987
Q ss_pred C
Q 000432 1487 E 1487 (1513)
Q Consensus 1487 ~ 1487 (1513)
+
T Consensus 230 ~ 230 (243)
T COG1137 230 E 230 (243)
T ss_pred h
Confidence 4
No 359
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-36 Score=350.93 Aligned_cols=203 Identities=26% Similarity=0.447 Sum_probs=168.1
Q ss_pred EEEEeEEEEeCCCCC--CCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------
Q 000432 632 VEVVNGKFSWNPESS--SPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------- 696 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~--~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------- 696 (1513)
|+++|++|+|+.... +++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++|.
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 789999999974321 36999999999999999999999999999999999999999999999873
Q ss_pred ----EEEEcCCC--cccCccHHHHHccCCC---CCch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHH
Q 000432 697 ----KAYVPQSP--WILTGNIRENILFGNQ---YDSC----KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQ 763 (1513)
Q Consensus 697 ----~ayv~Q~~--~l~~~ti~eNI~fg~~---~~~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkq 763 (1513)
++||+|+| .++..|+.|||.|+.. .+.+ ++.+.++..++.++ .......+|||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~----------~~~~~~~~LSgGqkq 151 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADE----------FWEKSPFELSGGQMR 151 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChh----------hccCCcccCCHHHHH
Confidence 58999998 7888999999998743 1221 22333333333211 123556789999999
Q ss_pred HHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHH
Q 000432 764 RIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEE 841 (1513)
Q Consensus 764 Ri~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~ 841 (1513)
|++||||++.+|+++||||||++||+.+.+.+.+ .+..+. +++|+|++||+++.+. .||+|++|++|++++.|++++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~-~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~ 230 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQ-LFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSD 230 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHH-HHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999877764 565543 4899999999999875 599999999999999999999
Q ss_pred HHhc
Q 000432 842 LLKQ 845 (1513)
Q Consensus 842 l~~~ 845 (1513)
+..+
T Consensus 231 ~~~~ 234 (288)
T PRK13643 231 VFQE 234 (288)
T ss_pred HHcC
Confidence 8653
No 360
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-36 Score=325.13 Aligned_cols=203 Identities=28% Similarity=0.433 Sum_probs=169.2
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC---------------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG--------------- 695 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g--------------- 695 (1513)
.|+++|++..|+. .+.+|+||||+|++||.+||+|+|||||||||++|.|..+|++|+|.++|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 5899999999974 46899999999999999999999999999999999999999999999998
Q ss_pred -eEEEEcCCCcccC-ccHHHHHccCCC------------CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHH
Q 000432 696 -TKAYVPQSPWILT-GNIRENILFGNQ------------YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQ 761 (1513)
Q Consensus 696 -~~ayv~Q~~~l~~-~ti~eNI~fg~~------------~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQ 761 (1513)
.+||++|++-|.+ .||-+|++.|.- +.++....++++..- +..+ -.--.+..+|||||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLer---vgi~-----~~A~qra~~LSGGQ 152 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALER---VGIL-----DKAYQRASTLSGGQ 152 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHH---cCcH-----HHHHHHhccCCcch
Confidence 3599999998875 599999998852 233333333333211 1111 11224567899999
Q ss_pred HHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhh--cCCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecC
Q 000432 762 KQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGI--LKDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGR 838 (1513)
Q Consensus 762 kqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~--~~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~ 838 (1513)
+|||+|||||+++|+|+|-|||+|+|||.+++++++. ++.. ..|.|+|+.-|++++.. .||||+-|++|+|++.|+
T Consensus 153 QQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~-l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~ 231 (258)
T COG3638 153 QQRVAIARALVQQPKIILADEPVASLDPESAKKVMDI-LKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGP 231 (258)
T ss_pred hHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHH-HHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCC
Confidence 9999999999999999999999999999999999864 4333 35899999999999965 599999999999999999
Q ss_pred hHHHHh
Q 000432 839 FEELLK 844 (1513)
Q Consensus 839 ~~~l~~ 844 (1513)
.+|+-+
T Consensus 232 ~~el~~ 237 (258)
T COG3638 232 ASELTD 237 (258)
T ss_pred hhhhhH
Confidence 999643
No 361
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-36 Score=350.56 Aligned_cols=205 Identities=25% Similarity=0.430 Sum_probs=168.6
Q ss_pred eEEEEeEEEEeCCCC--CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC-------------
Q 000432 631 EVEVVNGKFSWNPES--SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG------------- 695 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g------------- 695 (1513)
.++++|++++|+... .+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13637 2 SIKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDI 81 (287)
T ss_pred EEEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHH
Confidence 378999999996422 24799999999999999999999999999999999999999999999987
Q ss_pred --eEEEEcCCC--cccCccHHHHHccCCC---CCchH----HHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHH
Q 000432 696 --TKAYVPQSP--WILTGNIRENILFGNQ---YDSCK----YDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQR 764 (1513)
Q Consensus 696 --~~ayv~Q~~--~l~~~ti~eNI~fg~~---~~~~~----~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqR 764 (1513)
.++||+|+| .+++.|++|||.|+.. .+.+. .+++++.++|. +.+........||||||||
T Consensus 82 ~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qr 152 (287)
T PRK13637 82 RKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRR 152 (287)
T ss_pred hhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHH
Confidence 258999998 6788999999998642 22221 22333333332 1122345667899999999
Q ss_pred HHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHH
Q 000432 765 IQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEE 841 (1513)
Q Consensus 765 i~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~ 841 (1513)
++||||+..+|+++||||||++||+.+.+.+. +++..+. .++|+|+|||+++.+. .||+|++|++|++++.|+.++
T Consensus 153 v~iAraL~~~P~llllDEPt~gLD~~~~~~l~-~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~ 231 (287)
T PRK13637 153 VAIAGVVAMEPKILILDEPTAGLDPKGRDEIL-NKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPRE 231 (287)
T ss_pred HHHHHHHHcCCCEEEEECCccCCCHHHHHHHH-HHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 99999999999999999999999999988776 4566554 3799999999999875 599999999999999999998
Q ss_pred HHhc
Q 000432 842 LLKQ 845 (1513)
Q Consensus 842 l~~~ 845 (1513)
+.+.
T Consensus 232 ~~~~ 235 (287)
T PRK13637 232 VFKE 235 (287)
T ss_pred HHhC
Confidence 8653
No 362
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-36 Score=357.39 Aligned_cols=201 Identities=27% Similarity=0.408 Sum_probs=168.2
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-----------EEE
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-----------KAY 699 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-----------~ay 699 (1513)
.|+++|++++|.. .++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|. ++|
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig~ 82 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQQRDICM 82 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 6899999999963 46899999999999999999999999999999999999999999999884 699
Q ss_pred EcCCCcccC-ccHHHHHccCCCC---CchH-HHH---HHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHH
Q 000432 700 VPQSPWILT-GNIRENILFGNQY---DSCK-YDR---TVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAV 771 (1513)
Q Consensus 700 v~Q~~~l~~-~ti~eNI~fg~~~---~~~~-~~~---v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal 771 (1513)
|+|++.+|. .||+|||.|+... +++. .++ +++..++.. ........|||||||||+||||+
T Consensus 83 vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~-----------~~~r~~~~LSgGq~QRVaLARaL 151 (351)
T PRK11432 83 VFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAG-----------FEDRYVDQISGGQQQRVALARAL 151 (351)
T ss_pred EeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCch-----------hhcCChhhCCHHHHHHHHHHHHH
Confidence 999999996 5999999998532 2221 222 222222221 12344578999999999999999
Q ss_pred hcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCcc-ccCCEEEEEeCCeEEEecChHHHHhcC
Q 000432 772 YQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILK--DKSVLYVTHQVEFL-PAADIILVMENGRIAQAGRFEELLKQN 846 (1513)
Q Consensus 772 ~~~~~illLDep~salD~~~~~~i~~~~~~~~~~--~~TvilvtH~~~~l-~~~d~i~vl~~G~i~~~g~~~~l~~~~ 846 (1513)
+.+|+++|||||||+||+.+.+.+.+ .++.+.+ ++|+|+|||+.+.+ ..||+|++|++|++++.|+++++.++.
T Consensus 152 ~~~P~lLLLDEP~s~LD~~~r~~l~~-~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~p 228 (351)
T PRK11432 152 ILKPKVLLFDEPLSNLDANLRRSMRE-KIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQP 228 (351)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 99999999999999999999887754 5555543 79999999999986 459999999999999999999987653
No 363
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-36 Score=348.18 Aligned_cols=203 Identities=28% Similarity=0.435 Sum_probs=169.3
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------E
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------K 697 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~ 697 (1513)
.++++|++++|+.....++|+|+||+|++||+++|+|+||||||||+++|+|+++|.+|+|.++|. +
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 488999999996433346999999999999999999999999999999999999999999999883 5
Q ss_pred EEEcCCCc--ccCccHHHHHccCCC---CCc----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHH
Q 000432 698 AYVPQSPW--ILTGNIRENILFGNQ---YDS----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIA 768 (1513)
Q Consensus 698 ayv~Q~~~--l~~~ti~eNI~fg~~---~~~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lA 768 (1513)
+||+|+|. ++..||+|||.|+.. .++ ++.+++++..++.+.. .....+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFK-----------EREPARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHh-----------hCCcccCCHHHHHHHHHH
Confidence 89999984 567799999998742 222 2234444444443322 234468999999999999
Q ss_pred HHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000432 769 RAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 769 Ral~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
||++++|+++||||||++||+.+.+.++ +++..+. .|+|+|+|||+++.+..||+|++|++|++++.|+.+++...
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~-~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELI-KTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHH-HHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 9999999999999999999999877776 4566554 38999999999998878999999999999999999888654
No 364
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=5.8e-36 Score=359.81 Aligned_cols=227 Identities=25% Similarity=0.379 Sum_probs=193.4
Q ss_pred eEEEEEEEEEEcCCCC--cceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCC----CcEEEEcCeeCCCCChHH
Q 000432 1261 TISFHNLQIRYAEHLP--SVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPT----MGSIIIDNVDITKIGLHD 1334 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~--~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~----~G~I~IDGvdI~~i~l~~ 1334 (1513)
-++++|++..|..... .+++||||+|.+||.+||||+|||||||++++|.|+.++. +|+|.+||.|+..++-+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 6899999999975433 4999999999999999999999999999999999999988 899999999999999877
Q ss_pred hh----hceEEEcCCCc-cccC--cHhhccC----CCC----CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCC
Q 000432 1335 LR----SRLGIIPQDPT-LFDG--TVRGNLD----PLV----QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENW 1399 (1513)
Q Consensus 1335 LR----~~isiVpQdp~-LF~g--TIR~NLd----p~~----~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nL 1399 (1513)
+| ++|++|||||. .++- ||.+-|. -.. +...++..+.|+++++.+-... ..-...|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl~~~~~~---------~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGLPDPERR---------DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCCCChhhh---------ccCCccc
Confidence 64 47999999996 5553 5555542 111 1134567888889988765443 1223568
Q ss_pred ChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeE
Q 000432 1400 SVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAE 1476 (1513)
Q Consensus 1400 SgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE 1476 (1513)
|||||||+.||+||..+|++||+||||.+||..|.++|.+.|++.. .+.++|+|||++..+.. ||||+||++|++||
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999998875 58899999999999988 99999999999999
Q ss_pred ecChhHHHhcCChHHHHHHH
Q 000432 1477 YDSPTKLLEREDSFFSQLIK 1496 (1513)
Q Consensus 1477 ~Gtp~eLl~~~~~~f~~l~~ 1496 (1513)
.|+++++++++..-|-+..-
T Consensus 236 ~G~~~~i~~~p~hpYT~~Ll 255 (539)
T COG1123 236 TGPTEEILSNPQHPYTRGLL 255 (539)
T ss_pred ecCHHHHHhccCCcccHHHH
Confidence 99999999998777766543
No 365
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.2e-36 Score=350.66 Aligned_cols=203 Identities=26% Similarity=0.420 Sum_probs=168.3
Q ss_pred EEEEeEEEEeCCCC--CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------
Q 000432 632 VEVVNGKFSWNPES--SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------- 696 (1513)
Q Consensus 632 I~~~~~sf~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------- 696 (1513)
++++|++++|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996432 246999999999999999999999999999999999999999999999873
Q ss_pred ----EEEEcCCC--cccCccHHHHHccCCC---CCch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHH
Q 000432 697 ----KAYVPQSP--WILTGNIRENILFGNQ---YDSC----KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQ 763 (1513)
Q Consensus 697 ----~ayv~Q~~--~l~~~ti~eNI~fg~~---~~~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkq 763 (1513)
++||+|+| .+++.||+|||.|+.. .+.+ +.+++++.++|.+++ ......+|||||||
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~----------~~~~~~~LSgGq~q 152 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEEL----------LARSPFELSGGQMR 152 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhh----------hhCCcccCCHHHHH
Confidence 68999998 6888899999998742 2222 233344444443222 13345689999999
Q ss_pred HHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChH
Q 000432 764 RIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFE 840 (1513)
Q Consensus 764 Ri~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~ 840 (1513)
|++||||++++|+++||||||++||+.+...+.+ .++.+. .+.|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 153 rv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~-~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~ 231 (290)
T PRK13634 153 RVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMME-MFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPR 231 (290)
T ss_pred HHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHH
Confidence 9999999999999999999999999999877764 565553 3799999999999875 59999999999999999999
Q ss_pred HHHhc
Q 000432 841 ELLKQ 845 (1513)
Q Consensus 841 ~l~~~ 845 (1513)
++.+.
T Consensus 232 ~~~~~ 236 (290)
T PRK13634 232 EIFAD 236 (290)
T ss_pred HHhcC
Confidence 88654
No 366
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=6.6e-36 Score=341.69 Aligned_cols=207 Identities=21% Similarity=0.302 Sum_probs=176.9
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
++++||+++ .+|+|+||+|++||++||+|++|||||||+++|.|+++ .+|+|.+||.++...+...+|+.++|
T Consensus 1 ~~~~~l~~~------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~i~~ 73 (248)
T PRK03695 1 MQLNDVAVS------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-GSGSIQFAGQPLEAWSAAELARHRAY 73 (248)
T ss_pred Ccccccchh------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-CCeEEEECCEecCcCCHHHHhhheEE
Confidence 356788875 27999999999999999999999999999999999985 59999999999998888888889999
Q ss_pred EcCCCc-cccCcHhhccCCCCC--CC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHc
Q 000432 1342 IPQDPT-LFDGTVRGNLDPLVQ--YS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLL 1414 (1513)
Q Consensus 1342 VpQdp~-LF~gTIR~NLdp~~~--~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALL 1414 (1513)
+||++. .+..|+++|+..... .+ ++++.++++..++.+.. ......||||||||++||||++
T Consensus 74 v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~al~ 142 (248)
T PRK03695 74 LSQQQTPPFAMPVFQYLTLHQPDKTRTEAVASALNEVAEALGLDDKL-----------GRSVNQLSGGEWQRVRLAAVVL 142 (248)
T ss_pred ecccCccCCCccHHHHHHhcCccCCCcHHHHHHHHHHHHHcCCHhHh-----------cCCcccCCHHHHHHHHHHHHHh
Confidence 999985 456799999975321 11 23566777777765433 2234679999999999999999
Q ss_pred c-------CCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHh
Q 000432 1415 K-------KSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1415 r-------~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
+ +|++|+|||||++||+++...+.+.|++.. +++|+|+++|+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 143 ~~~~~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 222 (248)
T PRK03695 143 QVWPDINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVLT 222 (248)
T ss_pred ccccccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHhC
Confidence 7 679999999999999999999999998764 47899999999997765 99999999999999999999875
Q ss_pred c
Q 000432 1486 R 1486 (1513)
Q Consensus 1486 ~ 1486 (1513)
.
T Consensus 223 ~ 223 (248)
T PRK03695 223 P 223 (248)
T ss_pred c
Confidence 3
No 367
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=7.4e-36 Score=337.06 Aligned_cols=205 Identities=30% Similarity=0.445 Sum_probs=175.4
Q ss_pred CcceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-----------
Q 000432 628 SEFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT----------- 696 (1513)
Q Consensus 628 ~~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~----------- 696 (1513)
....++++|++++|+.....++|+|+||+|++|++++|+|+||||||||+++|+|+.+|++|+|.++|.
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 345799999999997432347999999999999999999999999999999999999999999999873
Q ss_pred --EEEEcCCCcccCccHHHHHccCCCCC-chHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhc
Q 000432 697 --KAYVPQSPWILTGNIRENILFGNQYD-SCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQ 773 (1513)
Q Consensus 697 --~ayv~Q~~~l~~~ti~eNI~fg~~~~-~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~ 773 (1513)
++|++|++.++..|++||+.++.... ...+.+..+...+.+-++.++.|.++.+..+..+|||||||||+||||+++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 69999999999999999999875422 122223333344566678888888888999999999999999999999999
Q ss_pred CCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeE
Q 000432 774 DADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRI 833 (1513)
Q Consensus 774 ~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i 833 (1513)
+|+++||||||++||+++.+.+. +.+..+.+++|+|++||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~-~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQ-QALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHH-HHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999977775 456666567899999999999888999999999974
No 368
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.2e-35 Score=330.72 Aligned_cols=189 Identities=28% Similarity=0.508 Sum_probs=163.3
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC-------------e
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG-------------T 696 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g-------------~ 696 (1513)
..++++|++++|+.. ..++++|+||+|++|++++|+|+||||||||+++|+|+++|.+|+|.++| .
T Consensus 5 ~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~ 83 (207)
T cd03369 5 GEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSS 83 (207)
T ss_pred CeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 469999999999642 24799999999999999999999999999999999999999999999987 3
Q ss_pred EEEEcCCCcccCccHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCC
Q 000432 697 KAYVPQSPWILTGNIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDAD 776 (1513)
Q Consensus 697 ~ayv~Q~~~l~~~ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~ 776 (1513)
++||+|+|.++++|++||+.+..+++. +++.+++. ++++..+||||||||++||||++.+|+
T Consensus 84 i~~v~q~~~~~~~tv~~~l~~~~~~~~---~~~~~~l~---------------~~~~~~~LS~G~~qrv~laral~~~p~ 145 (207)
T cd03369 84 LTIIPQDPTLFSGTIRSNLDPFDEYSD---EEIYGALR---------------VSEGGLNLSQGQRQLLCLARALLKRPR 145 (207)
T ss_pred EEEEecCCcccCccHHHHhcccCCCCH---HHHHHHhh---------------ccCCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 699999999999999999987544332 22222221 356778999999999999999999999
Q ss_pred EEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEecC
Q 000432 777 IYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAGR 838 (1513)
Q Consensus 777 illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~ 838 (1513)
++||||||++||+.+.+.+. +.++...+++|+|++||+++.+..||++++|++|++.+.|+
T Consensus 146 llllDEP~~~LD~~~~~~l~-~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 146 VLVLDEATASIDYATDALIQ-KTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred EEEEeCCcccCCHHHHHHHH-HHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 99999999999999977665 45666556899999999999987899999999999998775
No 369
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=5.9e-36 Score=342.73 Aligned_cols=211 Identities=18% Similarity=0.236 Sum_probs=169.1
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccC--CCCCcEEEEcCeeCCCCChHHhh-hc
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIV--EPTMGSIIIDNVDITKIGLHDLR-SR 1338 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~--ep~~G~I~IDGvdI~~i~l~~LR-~~ 1338 (1513)
|+++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|.|++ +|++|+|.+||.++...+....+ ..
T Consensus 2 i~~~nl~~~~~~--~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (248)
T PRK09580 2 LSIKDLHVSVED--KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEG 79 (248)
T ss_pred eEEEEEEEEeCC--eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcc
Confidence 789999999974 35999999999999999999999999999999999994 69999999999999888776654 57
Q ss_pred eEEEcCCCccccC-cHhhcc-------CCCCC---CC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhH
Q 000432 1339 LGIIPQDPTLFDG-TVRGNL-------DPLVQ---YS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQ 1403 (1513)
Q Consensus 1339 isiVpQdp~LF~g-TIR~NL-------dp~~~---~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQ 1403 (1513)
++++||+|.++.. |..+|+ ..... .. ++.+.+.++..++ |+++.+... ..+|||||
T Consensus 80 i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~~~--~~~LS~G~ 150 (248)
T PRK09580 80 IFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKM-------PEDLLTRSV--NVGFSGGE 150 (248)
T ss_pred eEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCC-------ChhhcccCC--CCCCCHHH
Confidence 9999999987754 433332 21110 01 1112233333333 222222111 13699999
Q ss_pred HHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC-CcEEEEeccChhhHhh--cCEEEEEeCCEEeEecCh
Q 000432 1404 RQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK-DRTVVTIAHRIHTVID--SDLVLVLSDGRIAEYDSP 1480 (1513)
Q Consensus 1404 RQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~-~~TvI~IAHRl~ti~~--~DrIlVLd~G~IvE~Gtp 1480 (1513)
|||++||||++++|+||+|||||++||.++.+.+.+.|++..+ ++|||+|+|+++.+.. ||+|++|++|++++.|++
T Consensus 151 ~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~~ 230 (248)
T PRK09580 151 KKRNDILQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDF 230 (248)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCCH
Confidence 9999999999999999999999999999999999999987643 6899999999999987 899999999999999998
Q ss_pred hHH
Q 000432 1481 TKL 1483 (1513)
Q Consensus 1481 ~eL 1483 (1513)
++.
T Consensus 231 ~~~ 233 (248)
T PRK09580 231 TLV 233 (248)
T ss_pred HHH
Confidence 854
No 370
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=3.6e-36 Score=339.79 Aligned_cols=195 Identities=27% Similarity=0.448 Sum_probs=161.0
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCc-----cCCCcEEEECCe----------
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEI-----QKMAGTVKISGT---------- 696 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~-----~~~~G~i~~~g~---------- 696 (1513)
|+++|++++|+. +++|+|+||+|++||+++|+|+||||||||+++|+|.+ +|.+|+|.++|.
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 468999999963 47999999999999999999999999999999999999 999999999872
Q ss_pred -----EEEEcCCCcccCccHHHHHccCCCC---Cc-----hHHHHHHHHHhcHHHHhhccCCCCccccCC--CCCCChHH
Q 000432 697 -----KAYVPQSPWILTGNIRENILFGNQY---DS-----CKYDRTVEACALVKDFELFASGDLTEIGER--GINMSGGQ 761 (1513)
Q Consensus 697 -----~ayv~Q~~~l~~~ti~eNI~fg~~~---~~-----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~--g~~LSGGQ 761 (1513)
++|++|++.+++.|++||+.++... .. ++.+++++.+++.+.. ..+ +.+|||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~~~LSgG~ 146 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEV-----------KDRLHALGLSGGQ 146 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHH-----------hccCCcccCCHHH
Confidence 5899999999988999999886421 11 1222333333332222 122 47899999
Q ss_pred HHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChH
Q 000432 762 KQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFE 840 (1513)
Q Consensus 762 kqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~ 840 (1513)
|||++||||++++|+++||||||++||+.+.+.++ +.+..+.+++|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 147 ~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~-~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 225 (227)
T cd03260 147 QQRLCLARALANEPEVLLLDEPTSALDPISTAKIE-ELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTE 225 (227)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHH-HHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcc
Confidence 99999999999999999999999999999988776 45665544489999999999876 49999999999999999876
Q ss_pred H
Q 000432 841 E 841 (1513)
Q Consensus 841 ~ 841 (1513)
+
T Consensus 226 ~ 226 (227)
T cd03260 226 Q 226 (227)
T ss_pred c
Confidence 5
No 371
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-36 Score=323.80 Aligned_cols=204 Identities=28% Similarity=0.470 Sum_probs=165.8
Q ss_pred eEEEEeEEEEeCCCC-CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------
Q 000432 631 EVEVVNGKFSWNPES-SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------- 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------- 696 (1513)
.++++|+++.|+... ..++|+||||+|.+||.++|+|+||||||||.++|+|..+|++|+|.++|+
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 478999999997431 125999999999999999999999999999999999999999999999993
Q ss_pred -EEEEcCCCcc-c--CccHHHHHccCC-----CCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHH
Q 000432 697 -KAYVPQSPWI-L--TGNIRENILFGN-----QYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQI 767 (1513)
Q Consensus 697 -~ayv~Q~~~l-~--~~ti~eNI~fg~-----~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~l 767 (1513)
+-+|+|+|.- + .-||++-|.=+. +-.+++..++++..+|.+.+ .-.+...|||||+|||||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~----------l~R~P~eLSGGQ~QRiaI 152 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSF----------LDRRPHELSGGQRQRIAI 152 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHH----------HhcCchhcChhHHHHHHH
Confidence 4799999953 2 237776664221 11223345555555555433 123456799999999999
Q ss_pred HHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000432 768 ARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILK--DKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLK 844 (1513)
Q Consensus 768 ARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~--~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~ 844 (1513)
||||..+|+++|||||||+||+.+..+|++ .+..+.+ +-|.|+|||++..+.+ ||+|+||++|+++|.++-+++..
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~Iln-lL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILN-LLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLS 231 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHH-HHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhc
Confidence 999999999999999999999999999985 4554444 5599999999999877 99999999999999999999876
Q ss_pred c
Q 000432 845 Q 845 (1513)
Q Consensus 845 ~ 845 (1513)
.
T Consensus 232 ~ 232 (252)
T COG1124 232 H 232 (252)
T ss_pred C
Confidence 5
No 372
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=1.1e-35 Score=329.23 Aligned_cols=194 Identities=23% Similarity=0.293 Sum_probs=169.0
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
++++|++++|++. .+|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.... ..+|+++++
T Consensus 1 l~i~~l~~~~~~~--~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (201)
T cd03231 1 LEADELTCERDGR--ALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLLY 77 (201)
T ss_pred CEEEEEEEEeCCc--eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheEE
Confidence 5789999999653 5899999999999999999999999999999999999999999999999987653 568899999
Q ss_pred EcCCCccc-cCcHhhccCCC-CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCE
Q 000432 1342 IPQDPTLF-DGTVRGNLDPL-VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSI 1419 (1513)
Q Consensus 1342 VpQdp~LF-~gTIR~NLdp~-~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~I 1419 (1513)
+||++.++ ..|+++|+... ...+++++.++++..++.++.. +. ..+||||||||++||||++++|++
T Consensus 78 ~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~----~~~LS~G~~qrl~laral~~~p~l 146 (201)
T cd03231 78 LGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGFED-------RP----VAQLSAGQQRRVALARLLLSGRPL 146 (201)
T ss_pred eccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhhhc-------Cc----hhhCCHHHHHHHHHHHHHhcCCCE
Confidence 99999886 57999999654 2346778889999999875432 22 357999999999999999999999
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhH-hhcCEEEEE
Q 000432 1420 LVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTV-IDSDLVLVL 1469 (1513)
Q Consensus 1420 LiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti-~~~DrIlVL 1469 (1513)
|||||||++||+++.+.+.+.|++.. +++|+|+++|+...+ ..||+++++
T Consensus 147 lllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 147 WILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 99999999999999999999998754 479999999986655 458999887
No 373
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9e-36 Score=339.12 Aligned_cols=199 Identities=30% Similarity=0.431 Sum_probs=164.8
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-----------EEEE
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-----------KAYV 700 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-----------~ayv 700 (1513)
++++|++++|+. +++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++||
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~v 79 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPVQERNVGFV 79 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCccccceEEE
Confidence 789999999963 47999999999999999999999999999999999999999999999872 6999
Q ss_pred cCCCcccC-ccHHHHHccCCCC-------CchH----HHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHH
Q 000432 701 PQSPWILT-GNIRENILFGNQY-------DSCK----YDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIA 768 (1513)
Q Consensus 701 ~Q~~~l~~-~ti~eNI~fg~~~-------~~~~----~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lA 768 (1513)
+|+|.++. .|++||+.++... +... .++.++..++ .........+||||||||++||
T Consensus 80 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrl~la 148 (239)
T cd03296 80 FQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQL-----------DWLADRYPAQLSGGQRQRVALA 148 (239)
T ss_pred ecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCC-----------hhhhhcChhhCCHHHHHHHHHH
Confidence 99998885 5999999986432 1111 1122222222 2223445678999999999999
Q ss_pred HHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000432 769 RAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 769 Ral~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
||++.+|+++||||||++||+++.+.+. +++..+. .++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 149 ~al~~~p~llllDEP~~~LD~~~~~~l~-~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (239)
T cd03296 149 RALAVEPKVLLLDEPFGALDAKVRKELR-RWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDH 227 (239)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHH-HHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcC
Confidence 9999999999999999999999977775 4666553 27899999999998654 999999999999999999888643
No 374
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-36 Score=341.03 Aligned_cols=204 Identities=25% Similarity=0.395 Sum_probs=170.2
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCcc---CCCcEEEECCe-----------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQ---KMAGTVKISGT----------- 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~---~~~G~i~~~g~----------- 696 (1513)
.|+++|+++.|+. +++|+|+||++++||+++|+|+||||||||+++|+|+++ |++|+|.++|.
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 4789999999963 479999999999999999999999999999999999984 68999999873
Q ss_pred --EEEEcCCCcccCccHHHHHccCCCC-----C----chHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHH
Q 000432 697 --KAYVPQSPWILTGNIRENILFGNQY-----D----SCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRI 765 (1513)
Q Consensus 697 --~ayv~Q~~~l~~~ti~eNI~fg~~~-----~----~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi 765 (1513)
++|++|++.+++.|++||+.++... . +++..+.++.+++.+.+.. ...+++.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKD-------KLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhH-------HhcCCcccCCHHHHHHH
Confidence 6999999999999999999876321 1 1123344455554333221 23556789999999999
Q ss_pred HHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHHHHh
Q 000432 766 QIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEELLK 844 (1513)
Q Consensus 766 ~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~l~~ 844 (1513)
+||||++++|+++||||||++||+++...+. +++..+.+++|+|+|||+++.+. .||+|++|++|++++.|+.+++..
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~-~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 230 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIE-ELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFE 230 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999977665 56666666899999999999876 599999999999999999998865
Q ss_pred c
Q 000432 845 Q 845 (1513)
Q Consensus 845 ~ 845 (1513)
.
T Consensus 231 ~ 231 (246)
T PRK14269 231 N 231 (246)
T ss_pred C
Confidence 3
No 375
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=1e-35 Score=356.04 Aligned_cols=202 Identities=27% Similarity=0.392 Sum_probs=169.4
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-----------EE
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-----------KA 698 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-----------~a 698 (1513)
..++++|++++|+. .++|+|+||++++||+++|+|||||||||||++|+|+.+|++|+|.++|. ++
T Consensus 13 ~~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~~r~ig 89 (375)
T PRK09452 13 PLVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAENRHVN 89 (375)
T ss_pred ceEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 35899999999963 46899999999999999999999999999999999999999999999984 69
Q ss_pred EEcCCCcccCc-cHHHHHccCCCC---Cch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHH
Q 000432 699 YVPQSPWILTG-NIRENILFGNQY---DSC----KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARA 770 (1513)
Q Consensus 699 yv~Q~~~l~~~-ti~eNI~fg~~~---~~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARa 770 (1513)
||+|++.+|.. ||+|||.|+... +.. +.+++++..++.+..+ .+..+|||||||||+||||
T Consensus 90 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~p~~LSgGq~QRVaLARa 158 (375)
T PRK09452 90 TVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQ-----------RKPHQLSGGQQQRVAIARA 158 (375)
T ss_pred EEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhh-----------CChhhCCHHHHHHHHHHHH
Confidence 99999999955 999999998532 221 2233344444433332 3446899999999999999
Q ss_pred HhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCcc-ccCCEEEEEeCCeEEEecChHHHHhcC
Q 000432 771 VYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILK--DKSVLYVTHQVEFL-PAADIILVMENGRIAQAGRFEELLKQN 846 (1513)
Q Consensus 771 l~~~~~illLDep~salD~~~~~~i~~~~~~~~~~--~~TvilvtH~~~~l-~~~d~i~vl~~G~i~~~g~~~~l~~~~ 846 (1513)
|+.+|+++|||||||+||+++.+.+.+ .++.+.+ +.|+|+|||+.+.+ ..||+|++|++|+|++.|+++++.++.
T Consensus 159 L~~~P~llLLDEP~s~LD~~~r~~l~~-~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~p 236 (375)
T PRK09452 159 VVNKPKVLLLDESLSALDYKLRKQMQN-ELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEEP 236 (375)
T ss_pred HhcCCCEEEEeCCCCcCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCc
Confidence 999999999999999999999777754 5655543 79999999999885 459999999999999999999997654
No 376
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.8e-35 Score=316.06 Aligned_cols=159 Identities=28% Similarity=0.488 Sum_probs=148.4
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChH-HhhhceE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLH-DLRSRLG 1340 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~-~LR~~is 1340 (1513)
|+++|++++|++. ++|+|+||+|++||.+||+|++|||||||+++|.|+++|++|+|.+||.++...+.. ..|++++
T Consensus 1 l~~~~l~~~~~~~--~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i~ 78 (163)
T cd03216 1 LELRGITKRFGGV--KALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGIA 78 (163)
T ss_pred CEEEEEEEEECCe--EEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCeE
Confidence 5799999999643 599999999999999999999999999999999999999999999999999988764 4678899
Q ss_pred EEcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEE
Q 000432 1341 IIPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSIL 1420 (1513)
Q Consensus 1341 iVpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~IL 1420 (1513)
++|| ||+|||||++||||++++|++|
T Consensus 79 ~~~q------------------------------------------------------LS~G~~qrl~laral~~~p~il 104 (163)
T cd03216 79 MVYQ------------------------------------------------------LSVGERQMVEIARALARNARLL 104 (163)
T ss_pred EEEe------------------------------------------------------cCHHHHHHHHHHHHHhcCCCEE
Confidence 9999 9999999999999999999999
Q ss_pred EEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeE
Q 000432 1421 VLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAE 1476 (1513)
Q Consensus 1421 iLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE 1476 (1513)
+|||||++||.++.+.+.+.|++.. ++.|+|+++|+++.+.. ||++++|++|++++
T Consensus 105 llDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 105 ILDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred EEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 9999999999999999999998764 47899999999998876 99999999999986
No 377
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-35 Score=341.75 Aligned_cols=205 Identities=24% Similarity=0.428 Sum_probs=168.5
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCcc-----CCCcEEEECC---------
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQ-----KMAGTVKISG--------- 695 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~-----~~~G~i~~~g--------- 695 (1513)
..++++|++++|++ +++|+|+||+|++|++++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 5 ~~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 81 (253)
T PRK14242 5 PKMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVD 81 (253)
T ss_pred cEEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccC
Confidence 35899999999963 469999999999999999999999999999999999874 5899999877
Q ss_pred ------eEEEEcCCCcccCccHHHHHccCCC---C-Cc----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHH
Q 000432 696 ------TKAYVPQSPWILTGNIRENILFGNQ---Y-DS----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQ 761 (1513)
Q Consensus 696 ------~~ayv~Q~~~l~~~ti~eNI~fg~~---~-~~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQ 761 (1513)
.++|++|++.+++.|++||+.++.. . +. ++.++.++.+++.+.+ .+.......+|||||
T Consensus 82 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgGq 154 (253)
T PRK14242 82 VVELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEV-------KDRLHESALGLSGGQ 154 (253)
T ss_pred HHHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhh-------hHHhhCCcccCCHHH
Confidence 2699999999998999999988631 1 11 1222233333332221 123456678999999
Q ss_pred HHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChH
Q 000432 762 KQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFE 840 (1513)
Q Consensus 762 kqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~ 840 (1513)
|||++||||++.+|+++||||||++||+++.+.+. +.+..+.+++|+|++||+++.+. .||+|++|++|++++.|+++
T Consensus 155 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~-~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 233 (253)
T PRK14242 155 QQRLCIARALAVEPEVLLMDEPASALDPIATQKIE-ELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTE 233 (253)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHH-HHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999977775 46666656789999999999885 49999999999999999999
Q ss_pred HHHhc
Q 000432 841 ELLKQ 845 (1513)
Q Consensus 841 ~l~~~ 845 (1513)
++.+.
T Consensus 234 ~~~~~ 238 (253)
T PRK14242 234 QIFTR 238 (253)
T ss_pred HHHcC
Confidence 88654
No 378
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-35 Score=347.51 Aligned_cols=204 Identities=21% Similarity=0.363 Sum_probs=166.3
Q ss_pred eEEEEeEEEEeCCCC--CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC-------------
Q 000432 631 EVEVVNGKFSWNPES--SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG------------- 695 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g------------- 695 (1513)
.|+++|++++|+... ..++|+|+||+|++||+++|+|+||||||||+++|.|.++|++|+|.++|
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 378999999996432 13699999999999999999999999999999999999999999998864
Q ss_pred ------------------------eEEEEcCCC--cccCccHHHHHccCCC---CCchH----HHHHHHHHhcHHHHhhc
Q 000432 696 ------------------------TKAYVPQSP--WILTGNIRENILFGNQ---YDSCK----YDRTVEACALVKDFELF 742 (1513)
Q Consensus 696 ------------------------~~ayv~Q~~--~l~~~ti~eNI~fg~~---~~~~~----~~~v~~~~~l~~d~~~l 742 (1513)
.++||+|+| .++..||+|||.|+.. .+++. ..++++.++|..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~---- 157 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELVGLDES---- 157 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChh----
Confidence 158999986 6788899999998742 22222 2223333333211
Q ss_pred cCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-
Q 000432 743 ASGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLP- 820 (1513)
Q Consensus 743 ~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~- 820 (1513)
.......+||||||||++||||++.+|+++||||||++||+...+.+.+ .+..+. .|+|+|+|||+++.+.
T Consensus 158 ------~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~-~l~~l~~~g~tiiivtHd~~~~~~ 230 (305)
T PRK13651 158 ------YLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILE-IFDNLNKQGKTIILVTHDLDNVLE 230 (305)
T ss_pred ------hhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHCCCEEEEEeeCHHHHHH
Confidence 1335567899999999999999999999999999999999998777754 555543 4899999999999864
Q ss_pred cCCEEEEEeCCeEEEecChHHHHhc
Q 000432 821 AADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 821 ~~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
.||+|++|++|++++.|+.+++.+.
T Consensus 231 ~adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 231 WTKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred hCCEEEEEECCEEEEECCHHHHhcC
Confidence 5999999999999999999998654
No 379
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-35 Score=344.81 Aligned_cols=198 Identities=28% Similarity=0.458 Sum_probs=165.7
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------E
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------K 697 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~ 697 (1513)
-++++|++++|+. ..++|+|+||+|++||+++|+|+||||||||+++|.|.++|++|+|.++|. +
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 4889999999963 246999999999999999999999999999999999999999999999883 6
Q ss_pred EEEcCCC--cccCccHHHHHccCCC---CCc----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHH
Q 000432 698 AYVPQSP--WILTGNIRENILFGNQ---YDS----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIA 768 (1513)
Q Consensus 698 ayv~Q~~--~l~~~ti~eNI~fg~~---~~~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lA 768 (1513)
+||+|+| .++..|++||+.|+.. .+. ++++++++.+++.+..+. ....||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDK-----------PPYHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcC-----------ChhhCCHHHHHHHHHH
Confidence 9999998 6788899999998742 222 233444444454432222 3358999999999999
Q ss_pred HHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHHH
Q 000432 769 RAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEEL 842 (1513)
Q Consensus 769 Ral~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~l 842 (1513)
||+..+|+++||||||++||+.+.+.+.+ .+..+. +++|+|++||+++.+. .||+|++|++|++++.|+.+++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLME-ILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 99999999999999999999999887764 565543 4899999999999975 5999999999999999998654
No 380
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=344.75 Aligned_cols=207 Identities=24% Similarity=0.420 Sum_probs=168.3
Q ss_pred eEEEEeEEEEeCCCC--CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe------------
Q 000432 631 EVEVVNGKFSWNPES--SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------ 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------ 696 (1513)
.++++|++++|+... ..++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 2 ~l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (286)
T PRK13646 2 TIRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIR 81 (286)
T ss_pred EEEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996422 247999999999999999999999999999999999999999999999872
Q ss_pred -----EEEEcCCC--cccCccHHHHHccCCC---CCchHHHHHHHHHhcHHHHhhccCCCCc-cccCCCCCCChHHHHHH
Q 000432 697 -----KAYVPQSP--WILTGNIRENILFGNQ---YDSCKYDRTVEACALVKDFELFASGDLT-EIGERGINMSGGQKQRI 765 (1513)
Q Consensus 697 -----~ayv~Q~~--~l~~~ti~eNI~fg~~---~~~~~~~~v~~~~~l~~d~~~l~~Gd~T-~Ige~g~~LSGGQkqRi 765 (1513)
++||+|+| .++..|++|||.|+.. ++.+..++.++. + ++.+ |..+ .....+.+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~--~---l~~~--gL~~~~~~~~~~~LSgGq~qrv 154 (286)
T PRK13646 82 PVRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNYAHR--L---LMDL--GFSRDVMSQSPFQMSGGQMRKI 154 (286)
T ss_pred HHHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHHHHH--H---HHHc--CCChhhhhCCcccCCHHHHHHH
Confidence 59999997 6888899999998742 232222221111 1 1211 3332 23456789999999999
Q ss_pred HHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHHH
Q 000432 766 QIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEEL 842 (1513)
Q Consensus 766 ~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~l 842 (1513)
+||||++.+|+++||||||++||+.+.+.+. +.++.+. .++|+|+|||+++.+. .||+|++|++|++++.|+++++
T Consensus 155 ~laraL~~~p~illlDEPt~~LD~~~~~~l~-~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~ 233 (286)
T PRK13646 155 AIVSILAMNPDIIVLDEPTAGLDPQSKRQVM-RLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKEL 233 (286)
T ss_pred HHHHHHHhCCCEEEEECCcccCCHHHHHHHH-HHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999988775 4566553 4899999999999875 5999999999999999999988
Q ss_pred Hhc
Q 000432 843 LKQ 845 (1513)
Q Consensus 843 ~~~ 845 (1513)
.+.
T Consensus 234 ~~~ 236 (286)
T PRK13646 234 FKD 236 (286)
T ss_pred HhC
Confidence 654
No 381
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=8.7e-36 Score=355.06 Aligned_cols=201 Identities=29% Similarity=0.404 Sum_probs=168.6
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-----------EEE
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-----------KAY 699 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-----------~ay 699 (1513)
.++++|++++|+. .++|+|+||++++|++++|+|||||||||||++|+|+.+|++|+|.++|. ++|
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~~r~ig~ 80 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQKRDYGI 80 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHHHCCEEE
Confidence 5899999999963 46899999999999999999999999999999999999999999999983 699
Q ss_pred EcCCCcccC-ccHHHHHccCCC---CCch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHH
Q 000432 700 VPQSPWILT-GNIRENILFGNQ---YDSC----KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAV 771 (1513)
Q Consensus 700 v~Q~~~l~~-~ti~eNI~fg~~---~~~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal 771 (1513)
|+|++-+|. .||+|||.|+.. .+.+ +.+++++..+|. ........+|||||||||+|||||
T Consensus 81 v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~-----------~~~~~~~~~LSgGq~QRvaLARaL 149 (353)
T TIGR03265 81 VFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLP-----------GSERKYPGQLSGGQQQRVALARAL 149 (353)
T ss_pred EeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCC-----------chhhCChhhCCHHHHHHHHHHHHH
Confidence 999999995 699999999843 2222 222233333222 223355678999999999999999
Q ss_pred hcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHHHHhcC
Q 000432 772 YQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILK--DKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEELLKQN 846 (1513)
Q Consensus 772 ~~~~~illLDep~salD~~~~~~i~~~~~~~~~~--~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~l~~~~ 846 (1513)
+.+|+++|||||||+||+.+.+++.+ .++.+.+ +.|+|+|||+.+.+. .||+|++|++|++++.|+++++.++.
T Consensus 150 ~~~P~llLLDEP~s~LD~~~r~~l~~-~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~p 226 (353)
T TIGR03265 150 ATSPGLLLLDEPLSALDARVREHLRT-EIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRHP 226 (353)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCC
Confidence 99999999999999999999887764 4555433 789999999999864 59999999999999999999998653
No 382
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1e-35 Score=338.20 Aligned_cols=206 Identities=24% Similarity=0.369 Sum_probs=165.7
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------------E
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT--------------K 697 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~--------------~ 697 (1513)
++++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++|.+|+|.++|. +
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 467899999963 46999999999999999999999999999999999999999999999872 6
Q ss_pred EEEcCCCcccCc-cHHHHHccCCCCCc-hH--------HHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHH
Q 000432 698 AYVPQSPWILTG-NIRENILFGNQYDS-CK--------YDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQI 767 (1513)
Q Consensus 698 ayv~Q~~~l~~~-ti~eNI~fg~~~~~-~~--------~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~l 767 (1513)
+|++|++.++.+ |++|||.++..... .. ..+..+ ....+-++.+ |..........+||||||||++|
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~l 154 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREAR-ERAEELLERV--GLADLADRPAGELSYGQQRRLEI 154 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHH-HHHHHHHHHc--CccchhhCChhhCCHHHHHHHHH
Confidence 899999998876 99999988642210 00 000000 0111222222 33334556677899999999999
Q ss_pred HHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000432 768 ARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLK 844 (1513)
Q Consensus 768 ARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~ 844 (1513)
|||++.+|+++||||||++||+.+.+.+.+ .+..+. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 155 a~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 155 ARALATDPKLLLLDEPAAGLNPEETEELAE-LIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred HHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 999999999999999999999999887765 555543 68999999999999865 99999999999999999988754
No 383
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=374.74 Aligned_cols=212 Identities=25% Similarity=0.333 Sum_probs=182.7
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHh-hhce
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDL-RSRL 1339 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~L-R~~i 1339 (1513)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.+.. |+++
T Consensus 5 ~l~~~~l~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i 82 (510)
T PRK09700 5 YISMAGIGKSFGP--VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGI 82 (510)
T ss_pred eEEEeeeEEEcCC--eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCe
Confidence 4899999999964 359999999999999999999999999999999999999999999999999988876654 4679
Q ss_pred EEEcCCCccccC-cHhhccCCCC-------CC---C----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHH
Q 000432 1340 GIIPQDPTLFDG-TVRGNLDPLV-------QY---S----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQR 1404 (1513)
Q Consensus 1340 siVpQdp~LF~g-TIR~NLdp~~-------~~---s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQR 1404 (1513)
+||||++.+|.+ |+++|+.... .. + ++++.++++.+++.+. .|.++ .+||||||
T Consensus 83 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-------~~~~~----~~LSgG~~ 151 (510)
T PRK09700 83 GIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVD-------LDEKV----ANLSISHK 151 (510)
T ss_pred EEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCC-------cccch----hhCCHHHH
Confidence 999999998875 9999996421 10 1 2345667777776432 23333 46999999
Q ss_pred HHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhH
Q 000432 1405 QLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTK 1482 (1513)
Q Consensus 1405 Qrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~e 1482 (1513)
||++|||||+++|+||||||||++||+.+...+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|++++.|++++
T Consensus 152 qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~ 231 (510)
T PRK09700 152 QMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSD 231 (510)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhh
Confidence 99999999999999999999999999999999999998764 47899999999999976 99999999999999999988
Q ss_pred HHh
Q 000432 1483 LLE 1485 (1513)
Q Consensus 1483 Ll~ 1485 (1513)
+..
T Consensus 232 ~~~ 234 (510)
T PRK09700 232 VSN 234 (510)
T ss_pred CCH
Confidence 754
No 384
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-35 Score=356.96 Aligned_cols=200 Identities=29% Similarity=0.403 Sum_probs=167.6
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-----------EEE
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-----------KAY 699 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-----------~ay 699 (1513)
.++++|++++|+. .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~i~~ 79 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPAERGVGM 79 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHhHCCEEE
Confidence 4889999999963 46999999999999999999999999999999999999999999999873 699
Q ss_pred EcCCCcccC-ccHHHHHccCCCC---Cc----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHH
Q 000432 700 VPQSPWILT-GNIRENILFGNQY---DS----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAV 771 (1513)
Q Consensus 700 v~Q~~~l~~-~ti~eNI~fg~~~---~~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal 771 (1513)
|+|++.+|. .||+|||.|+... +. ++.+++++.+++.+. ......+|||||||||+|||||
T Consensus 80 v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~-----------~~~~~~~LSgGq~QRvaLAraL 148 (369)
T PRK11000 80 VFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHL-----------LDRKPKALSGGQRQRVAIGRTL 148 (369)
T ss_pred EeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhh-----------hcCChhhCCHHHHHHHHHHHHH
Confidence 999999986 5999999987432 21 123333444443322 2334568999999999999999
Q ss_pred hcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHHHHhc
Q 000432 772 YQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 772 ~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
+.+|+++|||||||+||+++.+.+.+ .++.+. .++|+|+|||+++.+. .||+|++|++|++++.|+++++...
T Consensus 149 ~~~P~lLLLDEPts~LD~~~~~~l~~-~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 149 VAEPSVFLLDEPLSNLDAALRVQMRI-EISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999877764 455543 2789999999999865 5999999999999999999998764
No 385
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-35 Score=339.35 Aligned_cols=205 Identities=24% Similarity=0.387 Sum_probs=168.4
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccC-----CCcEEEECCe--------
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQK-----MAGTVKISGT-------- 696 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~-----~~G~i~~~g~-------- 696 (1513)
..++++|++++|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|.
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (254)
T PRK14273 6 AIIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFD 82 (254)
T ss_pred ceEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEeccccccc
Confidence 36999999999963 4699999999999999999999999999999999999987 4899998762
Q ss_pred -------EEEEcCCCcccCccHHHHHccCCCC----CchH----HHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHH
Q 000432 697 -------KAYVPQSPWILTGNIRENILFGNQY----DSCK----YDRTVEACALVKDFELFASGDLTEIGERGINMSGGQ 761 (1513)
Q Consensus 697 -------~ayv~Q~~~l~~~ti~eNI~fg~~~----~~~~----~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQ 761 (1513)
++|++|++.+++.|++|||.|+... +.+. ..+.++.+++.+.+ ++ ....+..+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~----~~~~~~~~LSgG~ 155 (254)
T PRK14273 83 ILELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KD----KLNTNALSLSGGQ 155 (254)
T ss_pred HHHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HH----HHhCCcccCCHHH
Confidence 6899999999999999999986421 1111 22233333332111 11 2234567899999
Q ss_pred HHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChH
Q 000432 762 KQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFE 840 (1513)
Q Consensus 762 kqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~ 840 (1513)
|||++||||++++|+++||||||++||+++.+.+. +.+..+.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~-~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 234 (254)
T PRK14273 156 QQRLCIARTLAIEPNVILMDEPTSALDPISTGKIE-ELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTD 234 (254)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999988776 466666567899999999998754 9999999999999999999
Q ss_pred HHHhc
Q 000432 841 ELLKQ 845 (1513)
Q Consensus 841 ~l~~~ 845 (1513)
++.+.
T Consensus 235 ~~~~~ 239 (254)
T PRK14273 235 ELFFN 239 (254)
T ss_pred HHHhC
Confidence 98653
No 386
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.1e-35 Score=336.05 Aligned_cols=190 Identities=27% Similarity=0.379 Sum_probs=163.4
Q ss_pred eeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCcccc-CcHhhcc
Q 000432 1279 LKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFD-GTVRGNL 1357 (1513)
Q Consensus 1279 Lk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~-gTIR~NL 1357 (1513)
|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. +.+++||+|.+|. .|+++|+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~-----~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGP-----DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCCh-----hheEEecCcccCCCCCHHHHH
Confidence 589999999999999999999999999999999999999999999999876543 2489999999987 5999998
Q ss_pred CCC-----CCCCH----HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCC
Q 000432 1358 DPL-----VQYSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATAS 1428 (1513)
Q Consensus 1358 dp~-----~~~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSs 1428 (1513)
... ...++ +++.++++..++.+...+ ....||||||||++|||||+++|++|||||||++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 144 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERRAIVEEHIALVGLTEAADK-----------RPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGA 144 (230)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHcCCHHHHcC-----------ChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 642 22332 236677777777554322 2357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1429 VDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1429 lD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
||+.+.+.+.+.|++.. .++|+|+|+|+++.+.. ||+|++|++|++++.|++.+++
T Consensus 145 LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 203 (230)
T TIGR01184 145 LDALTRGNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEVP 203 (230)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceecc
Confidence 99999999999998764 37899999999999876 9999999999999999887663
No 387
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=9.7e-36 Score=355.01 Aligned_cols=202 Identities=26% Similarity=0.423 Sum_probs=168.8
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCC--cEEEECCe-----------
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMA--GTVKISGT----------- 696 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~--G~i~~~g~----------- 696 (1513)
+.++++|++++|+. .++|+|+||+|++|++++|+|||||||||||++|+|+.+|++ |+|.++|.
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~~~r~ 80 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPPHKRG 80 (362)
T ss_pred eEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCHHHCC
Confidence 46899999999963 469999999999999999999999999999999999999999 99999883
Q ss_pred EEEEcCCCcccCc-cHHHHHccCCCC---Cch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHH
Q 000432 697 KAYVPQSPWILTG-NIRENILFGNQY---DSC----KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIA 768 (1513)
Q Consensus 697 ~ayv~Q~~~l~~~-ti~eNI~fg~~~---~~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lA 768 (1513)
++||+|++.+|.. ||+|||.|+... +.+ +.+++++..+|.+. ......+|||||||||+||
T Consensus 81 ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~-----------~~~~~~~LSgGq~QRvaLA 149 (362)
T TIGR03258 81 LALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDA-----------AAHLPAQLSGGMQQRIAIA 149 (362)
T ss_pred EEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCch-----------hhCChhhCCHHHHHHHHHH
Confidence 6999999999965 999999987431 211 22333333333222 2344568999999999999
Q ss_pred HHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcC---CcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHHHHh
Q 000432 769 RAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILK---DKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEELLK 844 (1513)
Q Consensus 769 Ral~~~~~illLDep~salD~~~~~~i~~~~~~~~~~---~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~l~~ 844 (1513)
|||..+|+++|||||||+||+...+++.+ .++.+.+ ++|+|+|||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 150 RAL~~~P~llLLDEP~s~LD~~~r~~l~~-~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~ 228 (362)
T TIGR03258 150 RAIAIEPDVLLLDEPLSALDANIRANMRE-EIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYD 228 (362)
T ss_pred HHHhcCCCEEEEcCccccCCHHHHHHHHH-HHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 99999999999999999999999887765 4554433 789999999999865 599999999999999999999986
Q ss_pred cC
Q 000432 845 QN 846 (1513)
Q Consensus 845 ~~ 846 (1513)
+.
T Consensus 229 ~p 230 (362)
T TIGR03258 229 AP 230 (362)
T ss_pred Cc
Confidence 53
No 388
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.1e-36 Score=333.21 Aligned_cols=191 Identities=32% Similarity=0.450 Sum_probs=157.7
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-----------EEEE
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-----------KAYV 700 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-----------~ayv 700 (1513)
++++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~i~~v 77 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPPERRNIGMV 77 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCchhhccEEEE
Confidence 468899999963 47999999999999999999999999999999999999999999999873 6999
Q ss_pred cCCCcccC-ccHHHHHccCCCC---Cch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHh
Q 000432 701 PQSPWILT-GNIRENILFGNQY---DSC----KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVY 772 (1513)
Q Consensus 701 ~Q~~~l~~-~ti~eNI~fg~~~---~~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~ 772 (1513)
+|++.++. .|++||+.++... +.+ +.++.++.+++. ........+||||||||++||||+.
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LSgG~~qrl~la~al~ 146 (213)
T cd03259 78 FQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGLE-----------GLLNRYPHELSGGQQQRVALARALA 146 (213)
T ss_pred cCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCh-----------hhhhcChhhCCHHHHHHHHHHHHHh
Confidence 99998885 6999999876421 211 122333333332 2233445689999999999999999
Q ss_pred cCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEec
Q 000432 773 QDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAG 837 (1513)
Q Consensus 773 ~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g 837 (1513)
++|+++||||||++||+.+.+.+.+ .+..+. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 147 ~~p~~lllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 147 REPSLLLLDEPLSALDAKLREELRE-ELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999877764 565543 37999999999998765 9999999999998765
No 389
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.5e-35 Score=353.08 Aligned_cols=201 Identities=32% Similarity=0.492 Sum_probs=167.3
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-----------EEE
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-----------KAY 699 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-----------~ay 699 (1513)
.++++|++++|+. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~i~~ 78 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHARDRKVGF 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHCCEEE
Confidence 3789999999963 46999999999999999999999999999999999999999999999883 699
Q ss_pred EcCCCcccC-ccHHHHHccCCCC-------Cch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHH
Q 000432 700 VPQSPWILT-GNIRENILFGNQY-------DSC----KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQI 767 (1513)
Q Consensus 700 v~Q~~~l~~-~ti~eNI~fg~~~-------~~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~l 767 (1513)
|+|++.++. .|++|||.|+... +.+ +.++.++..++.+ ....+...|||||||||+|
T Consensus 79 v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-----------~~~~~~~~LSgGq~QRval 147 (353)
T PRK10851 79 VFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAH-----------LADRYPAQLSGGQKQRVAL 147 (353)
T ss_pred EecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCch-----------hhhCChhhCCHHHHHHHHH
Confidence 999999996 5999999997532 111 1122223222221 2234557899999999999
Q ss_pred HHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHHHHh
Q 000432 768 ARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILK--DKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEELLK 844 (1513)
Q Consensus 768 ARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~--~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~l~~ 844 (1513)
||||+++|+++|||||||+||+++.+.+.+ .++.+.+ ++|+|+|||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 148 ArAL~~~P~llLLDEP~s~LD~~~r~~l~~-~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~ 226 (353)
T PRK10851 148 ARALAVEPQILLLDEPFGALDAQVRKELRR-WLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWR 226 (353)
T ss_pred HHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHh
Confidence 999999999999999999999999887764 5655543 789999999999865 499999999999999999999976
Q ss_pred cC
Q 000432 845 QN 846 (1513)
Q Consensus 845 ~~ 846 (1513)
+.
T Consensus 227 ~p 228 (353)
T PRK10851 227 EP 228 (353)
T ss_pred Cc
Confidence 53
No 390
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=7.8e-36 Score=334.48 Aligned_cols=189 Identities=23% Similarity=0.422 Sum_probs=155.5
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe---------------
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT--------------- 696 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~--------------- 696 (1513)
++++|++++|+.. .+++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 6889999999632 246999999999999999999999999999999999999999999999873
Q ss_pred -EEEEcCCCcccC-ccHHHHHccCCC---CC----chHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHH
Q 000432 697 -KAYVPQSPWILT-GNIRENILFGNQ---YD----SCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQI 767 (1513)
Q Consensus 697 -~ayv~Q~~~l~~-~ti~eNI~fg~~---~~----~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~l 767 (1513)
++|++|++.++. .|++||+.++.. .+ +++..++++.+++.+.. .....+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKA-----------HALPMQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhh-----------hCChhhCCHHHHHHHHH
Confidence 599999998886 599999987532 11 12233344444443222 23345899999999999
Q ss_pred HHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCeE
Q 000432 768 ARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPA-ADIILVMENGRI 833 (1513)
Q Consensus 768 ARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~-~d~i~vl~~G~i 833 (1513)
|||++++|+++||||||++||+++.+.+.+ .+..+. +++|+|+|||+++.+.. ||+|++|++|++
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMR-LFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999887765 555543 47899999999999875 999999999975
No 391
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.7e-35 Score=338.55 Aligned_cols=203 Identities=25% Similarity=0.423 Sum_probs=167.6
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCC-----CcEEEECCe----------
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKM-----AGTVKISGT---------- 696 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~-----~G~i~~~g~---------- 696 (1513)
++++|++++|+. .++++|+||+|++||+++|+|+||||||||+++|+|.++|. +|+|.++|.
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999963 46999999999999999999999999999999999999998 999998762
Q ss_pred -----EEEEcCCCcccCccHHHHHccCCCC----CchH----HHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHH
Q 000432 697 -----KAYVPQSPWILTGNIRENILFGNQY----DSCK----YDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQ 763 (1513)
Q Consensus 697 -----~ayv~Q~~~l~~~ti~eNI~fg~~~----~~~~----~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkq 763 (1513)
++|+||+++++..|++||+.++... +.+. .+++++..++.++++ ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHH
Confidence 6899999999999999999875321 1111 222233333321110 2345567799999999
Q ss_pred HHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHH
Q 000432 764 RIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEEL 842 (1513)
Q Consensus 764 Ri~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l 842 (1513)
|++||||++.+|+++||||||++||+++.+.++ ++++.+.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~-~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 230 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIE-ELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQI 230 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHH-HHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999977775 567666556899999999998764 999999999999999999888
Q ss_pred Hhc
Q 000432 843 LKQ 845 (1513)
Q Consensus 843 ~~~ 845 (1513)
.+.
T Consensus 231 ~~~ 233 (247)
T TIGR00972 231 FTN 233 (247)
T ss_pred HhC
Confidence 643
No 392
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=8.8e-36 Score=331.27 Aligned_cols=188 Identities=29% Similarity=0.489 Sum_probs=156.9
Q ss_pred EEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC----------eEEEEcC
Q 000432 633 EVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG----------TKAYVPQ 702 (1513)
Q Consensus 633 ~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g----------~~ayv~Q 702 (1513)
+++|++++|+.. +++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++| .++|++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~i~~~~q 78 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKAKERRKSIGYVMQ 78 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhhHHhhcceEEEec
Confidence 357899999631 5799999999999999999999999999999999999999999999988 3699999
Q ss_pred CC--cccCccHHHHHccCCCCC---chHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCE
Q 000432 703 SP--WILTGNIRENILFGNQYD---SCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDADI 777 (1513)
Q Consensus 703 ~~--~l~~~ti~eNI~fg~~~~---~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~i 777 (1513)
+| .+++.|++||+.++.+.. +++.+++++.+++.+..+ .....||||||||++||||++.+|++
T Consensus 79 ~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~laral~~~p~l 147 (205)
T cd03226 79 DVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKE-----------RHPLSLSGGQKQRLAIAAALLSGKDL 147 (205)
T ss_pred ChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcC-----------CCchhCCHHHHHHHHHHHHHHhCCCE
Confidence 98 467889999999864321 234455566665543322 23357999999999999999999999
Q ss_pred EEeeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCcccc-CCEEEEEeCCeEE
Q 000432 778 YLLDDPFSAVDAHTGTQLFKDCLMGI-LKDKSVLYVTHQVEFLPA-ADIILVMENGRIA 834 (1513)
Q Consensus 778 llLDep~salD~~~~~~i~~~~~~~~-~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~ 834 (1513)
+||||||++||+.+.+.+. +.++.+ .+++|+|++||+++.+.. ||+|++|++|+++
T Consensus 148 lllDEPt~~LD~~~~~~l~-~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 148 LIFDEPTSGLDYKNMERVG-ELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred EEEeCCCccCCHHHHHHHH-HHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 9999999999999977775 456554 357999999999999865 9999999999974
No 393
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-35 Score=334.25 Aligned_cols=196 Identities=34% Similarity=0.471 Sum_probs=160.4
Q ss_pred EEEEeEEEEeCCCC-CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC--------eEEEEcC
Q 000432 632 VEVVNGKFSWNPES-SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG--------TKAYVPQ 702 (1513)
Q Consensus 632 I~~~~~sf~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g--------~~ayv~Q 702 (1513)
++++|++++|+... .+++|+|+||+|++|++++|+|+||||||||+++|+|.++|++|+|.++| .++||+|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~i~~v~q 80 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTGPGPDRGYVFQ 80 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccccCcEEEEec
Confidence 46889999996421 14799999999999999999999999999999999999999999999987 3699999
Q ss_pred CCcccC-ccHHHHHccCCCC---Cc----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcC
Q 000432 703 SPWILT-GNIRENILFGNQY---DS----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQD 774 (1513)
Q Consensus 703 ~~~l~~-~ti~eNI~fg~~~---~~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~ 774 (1513)
++.++. .|++||+.++... +. ++.++.++..++.+. ......+||||||||++||||++++
T Consensus 81 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrl~la~al~~~ 149 (220)
T cd03293 81 QDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGF-----------ENAYPHQLSGGMRQRVALARALAVD 149 (220)
T ss_pred ccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhh-----------hhCCcccCCHHHHHHHHHHHHHHcC
Confidence 999887 6999999875321 11 122333344443322 2334468999999999999999999
Q ss_pred CCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEe--CCeEEEecCh
Q 000432 775 ADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLP-AADIILVME--NGRIAQAGRF 839 (1513)
Q Consensus 775 ~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~-~~d~i~vl~--~G~i~~~g~~ 839 (1513)
|+++||||||++||+.+.+.+++ .+..+. .++|+|++||+++.+. .||+|++|+ +|++++.++.
T Consensus 150 p~lllLDEPt~~LD~~~~~~~~~-~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 150 PDVLLLDEPFSALDALTREQLQE-ELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CCEEEECCCCCCCCHHHHHHHHH-HHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 99999999999999999888765 555543 3799999999999875 599999999 7999988764
No 394
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.8e-35 Score=371.68 Aligned_cols=212 Identities=22% Similarity=0.321 Sum_probs=181.0
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHH-hhhce
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHD-LRSRL 1339 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~-LR~~i 1339 (1513)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+++
T Consensus 4 ~i~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 81 (501)
T PRK10762 4 LLQLKGIDKAFPG--VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGI 81 (501)
T ss_pred eEEEeeeEEEeCC--eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999964 35999999999999999999999999999999999999999999999999997766554 36789
Q ss_pred EEEcCCCccccC-cHhhccCCCC-------CCCH----HHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHH
Q 000432 1340 GIIPQDPTLFDG-TVRGNLDPLV-------QYSD----KQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLF 1407 (1513)
Q Consensus 1340 siVpQdp~LF~g-TIR~NLdp~~-------~~sd----eei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl 1407 (1513)
+++||++.+|.. |+++|+.+.. ..+. +++.++++..++.+. +|.++ .+||||||||+
T Consensus 82 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LSgG~~qrv 150 (501)
T PRK10762 82 GIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFS-------SDKLV----GELSIGEQQMV 150 (501)
T ss_pred EEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCC-------ccCch----hhCCHHHHHHH
Confidence 999999988865 9999997421 1122 345667777766432 23333 46999999999
Q ss_pred HHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHh
Q 000432 1408 CLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1408 ~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
+|||||+.+|++|+|||||++||+++.+.+.+.|++.. .++|||+|+|+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (501)
T PRK10762 151 EIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTE 230 (501)
T ss_pred HHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCH
Confidence 99999999999999999999999999999999998753 47899999999999876 99999999999999999887643
No 395
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-35 Score=380.47 Aligned_cols=223 Identities=22% Similarity=0.340 Sum_probs=182.8
Q ss_pred eEEEEEEEEEEcCC--CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCC----------
Q 000432 1261 TISFHNLQIRYAEH--LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDIT---------- 1328 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~--~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~---------- 1328 (1513)
.|+++|++++|+.. ..++|+||||+|++||++||||+||||||||+++|.|+++|++|+|.++|+++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 69999999999632 236999999999999999999999999999999999999999999999998652
Q ss_pred CCChH---Hhh-hceEEEcCCC--cccc-CcHhhccCCC----CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhc
Q 000432 1329 KIGLH---DLR-SRLGIIPQDP--TLFD-GTVRGNLDPL----VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVA 1393 (1513)
Q Consensus 1329 ~i~l~---~LR-~~isiVpQdp--~LF~-gTIR~NLdp~----~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~ 1393 (1513)
+.+.. .+| ++|++|+|+| .++. -||++|+... ...+ ++++.++|+.+++.+. +....
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~--------~~~~~ 163 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAMVEAKRMLDQVRIPEA--------QTILS 163 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh--------hhHHh
Confidence 22222 344 5799999999 5776 4999999631 1122 2456778888887431 01112
Q ss_pred cCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-C-CcEEEEeccChhhHhh-cCEEEEEe
Q 000432 1394 ENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-K-DRTVVTIAHRIHTVID-SDLVLVLS 1470 (1513)
Q Consensus 1394 e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~-~~TvI~IAHRl~ti~~-~DrIlVLd 1470 (1513)
....+||||||||++|||||+.+|+||||||||++||+.+.+.+.+.|++.. + ++|||+|+|+++.+.. ||||+||+
T Consensus 164 ~~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~ 243 (623)
T PRK10261 164 RYPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMY 243 (623)
T ss_pred CCCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEee
Confidence 2345799999999999999999999999999999999999999999999865 2 7899999999999876 99999999
Q ss_pred CCEEeEecChhHHHhcCChHH
Q 000432 1471 DGRIAEYDSPTKLLEREDSFF 1491 (1513)
Q Consensus 1471 ~G~IvE~Gtp~eLl~~~~~~f 1491 (1513)
+|+|++.|+++++++.+...|
T Consensus 244 ~G~i~~~g~~~~~~~~~~~~~ 264 (623)
T PRK10261 244 QGEAVETGSVEQIFHAPQHPY 264 (623)
T ss_pred CCeecccCCHHHhhcCCCChh
Confidence 999999999999986543333
No 396
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=2e-35 Score=337.34 Aligned_cols=197 Identities=32% Similarity=0.442 Sum_probs=162.9
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe---------------
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT--------------- 696 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~--------------- 696 (1513)
++++|++++|+. ++++|+|+||++++|++++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 678999999962 257999999999999999999999999999999999999999999999872
Q ss_pred -EEEEcCCCcccC-ccHHHHHccCCCC------------Cch---HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCCh
Q 000432 697 -KAYVPQSPWILT-GNIRENILFGNQY------------DSC---KYDRTVEACALVKDFELFASGDLTEIGERGINMSG 759 (1513)
Q Consensus 697 -~ayv~Q~~~l~~-~ti~eNI~fg~~~------------~~~---~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSG 759 (1513)
++|++|++.++. .|++||+.++... .++ +..+.++.+++ .........+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGL-----------ADKAYQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCc-----------HhhhcCCcccCCH
Confidence 699999998886 5999999876321 011 12222222222 2233456678999
Q ss_pred HHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEe
Q 000432 760 GQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLP-AADIILVMENGRIAQA 836 (1513)
Q Consensus 760 GQkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~ 836 (1513)
|||||++||||++.+|+++||||||++||+.+.+.+. +.+..+. .++|+|+|||+++.+. .||++++|++|++++.
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~-~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~ 227 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVM-DYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFD 227 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHH-HHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEec
Confidence 9999999999999999999999999999999977775 4565553 3789999999999975 5999999999999999
Q ss_pred cChHHH
Q 000432 837 GRFEEL 842 (1513)
Q Consensus 837 g~~~~l 842 (1513)
|+++++
T Consensus 228 ~~~~~~ 233 (243)
T TIGR02315 228 GAPSEL 233 (243)
T ss_pred CCHHHh
Confidence 998886
No 397
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-35 Score=371.81 Aligned_cols=212 Identities=25% Similarity=0.345 Sum_probs=182.0
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC--CCcEEEEcCeeCCCCChHH-hhh
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP--TMGSIIIDNVDITKIGLHD-LRS 1337 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep--~~G~I~IDGvdI~~i~l~~-LR~ 1337 (1513)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++...+..+ .|+
T Consensus 5 ~l~~~nl~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (506)
T PRK13549 5 LLEMKNITKTFGG--VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERA 82 (506)
T ss_pred eEEEeeeEEEeCC--eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHC
Confidence 5999999999964 3599999999999999999999999999999999999996 8999999999998877665 467
Q ss_pred ceEEEcCCCccccC-cHhhccCCCCC------CC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHH
Q 000432 1338 RLGIIPQDPTLFDG-TVRGNLDPLVQ------YS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQL 1406 (1513)
Q Consensus 1338 ~isiVpQdp~LF~g-TIR~NLdp~~~------~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQr 1406 (1513)
+++||||+|.+|.. |+++|+..... .+ .+++.++++..++.+. .+.. ..+||||||||
T Consensus 83 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~----~~~LSgGqkqr 151 (506)
T PRK13549 83 GIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDIN-------PATP----VGNLGLGQQQL 151 (506)
T ss_pred CeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCC-------cccc----hhhCCHHHHHH
Confidence 89999999998865 99999974311 12 1346667777766432 2333 35699999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1407 FCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1407 l~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
++|||||+.+|+|||||||||+||+++...+.+.|++.. ++.|||+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 152 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 231 (506)
T PRK13549 152 VEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMT 231 (506)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCC
Confidence 999999999999999999999999999999999998763 47899999999999876 9999999999999999998875
Q ss_pred h
Q 000432 1485 E 1485 (1513)
Q Consensus 1485 ~ 1485 (1513)
.
T Consensus 232 ~ 232 (506)
T PRK13549 232 E 232 (506)
T ss_pred H
Confidence 3
No 398
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=3.7e-35 Score=369.18 Aligned_cols=213 Identities=27% Similarity=0.363 Sum_probs=185.8
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhh-hce
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLR-SRL 1339 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR-~~i 1339 (1513)
.|+++|++++|++ ..+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+..+++ ..+
T Consensus 11 ~l~~~~l~~~~~~--~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 88 (510)
T PRK15439 11 LLCARSISKQYSG--VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGI 88 (510)
T ss_pred eEEEEeEEEEeCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCE
Confidence 5999999999964 3599999999999999999999999999999999999999999999999999888777765 469
Q ss_pred EEEcCCCccccC-cHhhccCCCCC---CCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHcc
Q 000432 1340 GIIPQDPTLFDG-TVRGNLDPLVQ---YSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLK 1415 (1513)
Q Consensus 1340 siVpQdp~LF~g-TIR~NLdp~~~---~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr 1415 (1513)
+++||++.+|.+ |+++|+..... ..++++.++++..++.+. ++..+ .+||||||||++|||||++
T Consensus 89 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LSgG~~qrv~la~aL~~ 157 (510)
T PRK15439 89 YLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLD-------LDSSA----GSLEVADRQIVEILRGLMR 157 (510)
T ss_pred EEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCcc-------ccCCh----hhCCHHHHHHHHHHHHHHc
Confidence 999999998875 99999975321 123567778888877543 23333 4699999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1416 KSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1416 ~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
+|+||+|||||++||+.+...+.+.|++.. +++|||+++|+++.+.+ ||+|++|++|++++.|+++++.+.
T Consensus 158 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (510)
T PRK15439 158 DSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTD 230 (510)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHH
Confidence 999999999999999999999999998764 47899999999999876 999999999999999999988653
No 399
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-35 Score=335.20 Aligned_cols=201 Identities=25% Similarity=0.420 Sum_probs=168.5
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------E
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------K 697 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~ 697 (1513)
.++++|++++|+. +++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4789999999953 47999999999999999999999999999999999999999999999873 6
Q ss_pred EEEcCCCcccCccHHHHHccCCCCC---chHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcC
Q 000432 698 AYVPQSPWILTGNIRENILFGNQYD---SCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQD 774 (1513)
Q Consensus 698 ayv~Q~~~l~~~ti~eNI~fg~~~~---~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~ 774 (1513)
+|++|++.++..|++||+.++.... .++..+.++.+++..+ .......+||||||||++||||++++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~----------~~~~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKE----------YATRDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHH----------HhhCCcccCCHHHHHHHHHHHHHhcC
Confidence 9999999999999999999864322 1233334444444221 12345678999999999999999999
Q ss_pred CCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000432 775 ADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 775 ~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
|+++||||||++||+.+.+.+. +.+..+. .++|+|++||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 150 p~llllDEPt~~LD~~~~~~l~-~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIE-ELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN 222 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHH-HHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC
Confidence 9999999999999999877665 4566553 37999999999998765 999999999999999999988753
No 400
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2e-35 Score=328.01 Aligned_cols=194 Identities=21% Similarity=0.322 Sum_probs=168.8
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|+. .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.... ...|+++++
T Consensus 2 l~~~~l~~~~~~--~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~~ 78 (204)
T PRK13538 2 LEARNLACERDE--RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLLY 78 (204)
T ss_pred eEEEEEEEEECC--EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheEE
Confidence 789999999964 35999999999999999999999999999999999999999999999999998754 457889999
Q ss_pred EcCCCcccc-CcHhhccCCCC----CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccC
Q 000432 1342 IPQDPTLFD-GTVRGNLDPLV----QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKK 1416 (1513)
Q Consensus 1342 VpQdp~LF~-gTIR~NLdp~~----~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~ 1416 (1513)
+||++.++. .|+++|+.... ..+++++.++++..++.++..+ . ...||||||||++||||++++
T Consensus 79 ~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~-------~----~~~LS~G~~qrl~la~al~~~ 147 (204)
T PRK13538 79 LGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVGLAGFEDV-------P----VRQLSAGQQRRVALARLWLTR 147 (204)
T ss_pred eCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCHHHhhC-------C----hhhcCHHHHHHHHHHHHHhcC
Confidence 999998886 59999996421 1345678889999998755422 2 357999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEE
Q 000432 1417 SSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVL 1469 (1513)
Q Consensus 1417 ~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVL 1469 (1513)
|+||+|||||++||+++.+.+.+.|++.. +++|+|+++|+++.+.. .+|++++
T Consensus 148 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 148 APLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 99999999999999999999999998764 47899999999999965 4677776
No 401
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.7e-35 Score=332.68 Aligned_cols=198 Identities=25% Similarity=0.460 Sum_probs=164.1
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe------------EEE
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------KAY 699 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------~ay 699 (1513)
++++|+++.|+.. ++++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDRKAARQSLGY 79 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccchHHHhhhEEE
Confidence 4688999999632 257999999999999999999999999999999999999999999999874 599
Q ss_pred EcCCCccc-CccHHHHHccCCC---CCc----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHH
Q 000432 700 VPQSPWIL-TGNIRENILFGNQ---YDS----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAV 771 (1513)
Q Consensus 700 v~Q~~~l~-~~ti~eNI~fg~~---~~~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal 771 (1513)
|+|++.++ +.|++||+.++.. .+. ++.+++++.+++.+. ......+||||||||++||||+
T Consensus 80 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~la~al 148 (220)
T cd03263 80 CPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTDK-----------ANKRARTLSGGMKRKLSLAIAL 148 (220)
T ss_pred ecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------HhChhhhCCHHHHHHHHHHHHH
Confidence 99999888 5799999987531 111 223334444443221 2234468999999999999999
Q ss_pred hcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHH
Q 000432 772 YQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEEL 842 (1513)
Q Consensus 772 ~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l 842 (1513)
+.+|+++||||||++||+.+.+.+. +.+..+.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 149 ~~~p~llllDEP~~~LD~~~~~~l~-~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 149 IGGPSVLLLDEPTSGLDPASRRAIW-DLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred hcCCCEEEECCCCCCCCHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 9999999999999999999987776 466666567999999999999865 999999999999999988764
No 402
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-35 Score=333.15 Aligned_cols=196 Identities=22% Similarity=0.376 Sum_probs=161.5
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC------------eEEE
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG------------TKAY 699 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g------------~~ay 699 (1513)
|+++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|+|.++|++|+|.++| .++|
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 77 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVREPREVRRRIGI 77 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcChHHHhhcEEE
Confidence 468999999963 4799999999999999999999999999999999999999999999987 3699
Q ss_pred EcCCCcccCc-cHHHHHccCCC---CCc----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHH
Q 000432 700 VPQSPWILTG-NIRENILFGNQ---YDS----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAV 771 (1513)
Q Consensus 700 v~Q~~~l~~~-ti~eNI~fg~~---~~~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal 771 (1513)
++|++.++.. |++||+.++.. .+. ++.++.++..++.+.. .....+||||||||++||||+
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr~~la~al 146 (220)
T cd03265 78 VFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAA-----------DRLVKTYSGGMRRRLEIARSL 146 (220)
T ss_pred ecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCChhhCCHHHHHHHHHHHHH
Confidence 9999988864 99999987521 111 1233344444443221 223458999999999999999
Q ss_pred hcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-C-CcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHH
Q 000432 772 YQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-K-DKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEEL 842 (1513)
Q Consensus 772 ~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~-~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l 842 (1513)
+.+|+++||||||++||+++.+.+.+ .+..+. + ++|+|++||+++.+.. ||+|++|++|++++.|+.+++
T Consensus 147 ~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 147 VHRPEVLFLDEPTIGLDPQTRAHVWE-YIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred hcCCCEEEEcCCccCCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 99999999999999999999877764 555543 3 7899999999998765 999999999999999987664
No 403
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=2.1e-35 Score=335.12 Aligned_cols=191 Identities=27% Similarity=0.381 Sum_probs=160.6
Q ss_pred CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEc-CCCccc-cCcH
Q 000432 1276 PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIP-QDPTLF-DGTV 1353 (1513)
Q Consensus 1276 ~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVp-Qdp~LF-~gTI 1353 (1513)
.++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++... ...+|++++|+| |++.+| .-|+
T Consensus 34 ~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 34 VEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWKR-RKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccc-chhhcccEEEEcCCccccCCCCcH
Confidence 3599999999999999999999999999999999999999999999999987653 346788999997 667776 5699
Q ss_pred hhccCCC---CCCCHH----HHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCC
Q 000432 1354 RGNLDPL---VQYSDK----QVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEAT 1426 (1513)
Q Consensus 1354 R~NLdp~---~~~sde----ei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaT 1426 (1513)
++|+... ...+.+ ++.++++..++.+. +|+.+ .+||||||||++||||++.+|+||+|||||
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~-------~~~~~----~~LS~G~~qrl~la~al~~~p~llllDEPt 181 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKRLDELSELLDLEEL-------LDTPV----RQLSLGQRMRAEIAAALLHEPEILFLDEPT 181 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhH-------hcCCh----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence 9998532 122333 34455666665433 33333 469999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEec
Q 000432 1427 ASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYD 1478 (1513)
Q Consensus 1427 SslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~G 1478 (1513)
++||+++.+.+.+.|++..+ ++|+|+++|+++.+.. ||+|++|++|++++.|
T Consensus 182 ~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 182 IGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 99999999999999988643 7899999999999876 9999999999998765
No 404
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-35 Score=341.24 Aligned_cols=202 Identities=27% Similarity=0.434 Sum_probs=169.8
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------E
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------K 697 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~ 697 (1513)
.++++|+++.|+. ..+++|+|+||+|++||+++|+|+||||||||+++|+|.++|++|+|.++|. +
T Consensus 5 ~l~~~~l~~~~~~-~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPD-AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCC-CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 5899999999963 2357999999999999999999999999999999999999999999999883 5
Q ss_pred EEEcCCC--cccCccHHHHHccCCC---CCc----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHH
Q 000432 698 AYVPQSP--WILTGNIRENILFGNQ---YDS----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIA 768 (1513)
Q Consensus 698 ayv~Q~~--~l~~~ti~eNI~fg~~---~~~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lA 768 (1513)
+|++|+| .+++.|++|||.++.. .++ ++.+++++.++|.+.++ .....||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLN-----------REPHRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhh-----------CCcccCCHHHHHHHHHH
Confidence 8999998 4667899999998632 122 22344444445543333 33458999999999999
Q ss_pred HHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000432 769 RAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILK--DKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 769 Ral~~~~~illLDep~salD~~~~~~i~~~~~~~~~~--~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
||++.+|+++||||||++||+.+.+.+++ ++..+.+ ++|+|++||+++.+..||+|++|++|++++.|+.+++.+.
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~-~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLE-TVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999887764 5655543 7899999999998888999999999999999999888754
No 405
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.4e-36 Score=323.14 Aligned_cols=213 Identities=25% Similarity=0.405 Sum_probs=185.6
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHh-hhceE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDL-RSRLG 1340 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~L-R~~is 1340 (1513)
.+.+|++.+|..- .+++||||++++||.+|++||+||||||+++++.|+|+|++|+|.++|.||..++.+.. |..|+
T Consensus 5 L~v~~l~k~FGGl--~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~Gi~ 82 (250)
T COG0411 5 LEVRGLSKRFGGL--TAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLGIA 82 (250)
T ss_pred eeeccceeecCCE--EEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhccce
Confidence 6789999999753 49999999999999999999999999999999999999999999999999999999984 66688
Q ss_pred EEcCCCccccC-cHhhccCCCC-------------CC--C----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCC
Q 000432 1341 IIPQDPTLFDG-TVRGNLDPLV-------------QY--S----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWS 1400 (1513)
Q Consensus 1341 iVpQdp~LF~g-TIR~NLdp~~-------------~~--s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLS 1400 (1513)
--+|.+-+|++ |+-||+.-.. .+ . .|+-.+.|+.++|.+. -.+...+||
T Consensus 83 RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~-----------a~~~A~~Ls 151 (250)
T COG0411 83 RTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGEL-----------ADRPAGNLS 151 (250)
T ss_pred eecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchh-----------hcchhhcCC
Confidence 88999999977 9999984210 01 1 2344556666666544 334456899
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcC--CcEEEEeccChhhHhh-cCEEEEEeCCEEeEe
Q 000432 1401 VGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEFK--DRTVVTIAHRIHTVID-SDLVLVLSDGRIAEY 1477 (1513)
Q Consensus 1401 gGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~--~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~ 1477 (1513)
+||+.|+-|||||..+|++|+||||.|++.++-...+.+.|++..+ +.|+++|-||++.|++ ||||+||+.|+++..
T Consensus 152 yG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAe 231 (250)
T COG0411 152 YGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAE 231 (250)
T ss_pred hhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCccc
Confidence 9999999999999999999999999999999998999999988874 4899999999999998 999999999999999
Q ss_pred cChhHHHhcC
Q 000432 1478 DSPTKLLERE 1487 (1513)
Q Consensus 1478 Gtp~eLl~~~ 1487 (1513)
|+|+|..+++
T Consensus 232 G~P~eV~~dp 241 (250)
T COG0411 232 GTPEEVRNNP 241 (250)
T ss_pred CCHHHHhcCH
Confidence 9999999874
No 406
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-35 Score=324.76 Aligned_cols=225 Identities=24% Similarity=0.389 Sum_probs=194.4
Q ss_pred eEEEEEEEEEEcCCC----------------------CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCc
Q 000432 1261 TISFHNLQIRYAEHL----------------------PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMG 1318 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~----------------------~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G 1318 (1513)
.|+++||+.-+..+. ..-++|+||+|+.||..-|.|-||||||||++++-|++||++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 588888887775431 1247899999999999999999999999999999999999999
Q ss_pred EEEEcCeeCCCCChHHhh----hceEEEcCCCcccc-CcHhhccCCCCC---CC----HHHHHHHHHHcCCcHHHHhhhc
Q 000432 1319 SIIIDNVDITKIGLHDLR----SRLGIIPQDPTLFD-GTVRGNLDPLVQ---YS----DKQVWEALDKCQLGDLVRAKEE 1386 (1513)
Q Consensus 1319 ~I~IDGvdI~~i~l~~LR----~~isiVpQdp~LF~-gTIR~NLdp~~~---~s----deei~~aL~~~~l~~~I~~lp~ 1386 (1513)
+|++||.||..++..+|| +++++|+|.--||. -||-+|..++-+ .+ .+...++|+.+||.+|-.+.|+
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp~ 163 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYPN 163 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCcc
Confidence 999999999999998874 58999999999885 599999976522 22 3457789999999999888775
Q ss_pred cccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-c
Q 000432 1387 KLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-S 1463 (1513)
Q Consensus 1387 gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~ 1463 (1513)
.||||+|||+.|||||..+|+||+||||.|+|||--...+|+-+.+.- -.+|+++|||+|+.... -
T Consensus 164 -----------eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 164 -----------ELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred -----------cccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 579999999999999999999999999999999999999998876543 36899999999998655 9
Q ss_pred CEEEEEeCCEEeEecChhHHHhcCChHH-HHHHH
Q 000432 1464 DLVLVLSDGRIAEYDSPTKLLEREDSFF-SQLIK 1496 (1513)
Q Consensus 1464 DrIlVLd~G~IvE~Gtp~eLl~~~~~~f-~~l~~ 1496 (1513)
|||..|.+|+|+..|||+|.+.++..-| +..++
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~~Fv~ 266 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYVRDFVR 266 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHHHHHHh
Confidence 9999999999999999999999875444 33443
No 407
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-35 Score=338.44 Aligned_cols=206 Identities=25% Similarity=0.411 Sum_probs=169.9
Q ss_pred cceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCcc-----CCCcEEEECC--------
Q 000432 629 EFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQ-----KMAGTVKISG-------- 695 (1513)
Q Consensus 629 ~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~-----~~~G~i~~~g-------- 695 (1513)
...++++|++++|++ .++|+|+||+|++|++++|+|+||||||||+++|+|.++ |++|+|.++|
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 346899999999963 479999999999999999999999999999999999986 4799999876
Q ss_pred -------eEEEEcCCCcccCccHHHHHccCCC----CCchH----HHHHHHHHhcHHHHhhccCCCCccccCCCCCCChH
Q 000432 696 -------TKAYVPQSPWILTGNIRENILFGNQ----YDSCK----YDRTVEACALVKDFELFASGDLTEIGERGINMSGG 760 (1513)
Q Consensus 696 -------~~ayv~Q~~~l~~~ti~eNI~fg~~----~~~~~----~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGG 760 (1513)
.++|++|++.++..|++||+.++.. .+.+. .+++++..++..++ ...+.+...+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEV-------KDKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhh-------HHHHhcCCCCCCHH
Confidence 2689999999999999999988632 22222 22333333332222 23456677899999
Q ss_pred HHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecCh
Q 000432 761 QKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRF 839 (1513)
Q Consensus 761 QkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~ 839 (1513)
||||++||||++++|+++||||||++||+.+.+.+. +.+..+.+++|+|++||+++.+. .||+|++|++|++++.|+.
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~-~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~ 239 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIE-ELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNT 239 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHH-HHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999977775 45665556789999999999876 4999999999999999999
Q ss_pred HHHHhc
Q 000432 840 EELLKQ 845 (1513)
Q Consensus 840 ~~l~~~ 845 (1513)
+++.+.
T Consensus 240 ~~~~~~ 245 (260)
T PRK10744 240 DTIFTK 245 (260)
T ss_pred HHHHhC
Confidence 988653
No 408
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-35 Score=351.05 Aligned_cols=206 Identities=24% Similarity=0.392 Sum_probs=166.9
Q ss_pred EEEEeEEEEeCCCC-CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC---------------
Q 000432 632 VEVVNGKFSWNPES-SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG--------------- 695 (1513)
Q Consensus 632 I~~~~~sf~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g--------------- 695 (1513)
|+++|++++|+... +.++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 68999999996321 35799999999999999999999999999999999999999999999987
Q ss_pred -eEEEEcCCCcccC-ccHHHHHccCCC---CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHH
Q 000432 696 -TKAYVPQSPWILT-GNIRENILFGNQ---YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARA 770 (1513)
Q Consensus 696 -~~ayv~Q~~~l~~-~ti~eNI~fg~~---~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARa 770 (1513)
.++||+|++.++. .|++||+.++.. .+.+.+++.+. +-++.+ |..........+||||||||++||||
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~-----~~l~~~--gL~~~~~~~~~~LSgGq~qRv~lAra 154 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVT-----ELLELV--GLSDKADRYPAQLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHH-----HHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 2799999999886 699999988632 22222211111 111111 12222334567899999999999999
Q ss_pred HhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000432 771 VYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 771 l~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
++++|+++||||||++||+.+.+.+.+ .+..+. .++|+|++||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 155 L~~~p~iLlLDEPts~LD~~~~~~l~~-~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~ 231 (343)
T PRK11153 155 LASNPKVLLCDEATSALDPATTRSILE-LLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSH 231 (343)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999887764 565543 37899999999998765 999999999999999999998765
No 409
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.2e-35 Score=336.48 Aligned_cols=201 Identities=32% Similarity=0.457 Sum_probs=163.0
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe---------------
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT--------------- 696 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~--------------- 696 (1513)
++++|++++|+. ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 468899999963 257999999999999999999999999999999999999999999999872
Q ss_pred -EEEEcCCCcccC-ccHHHHHccCCCC------------CchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHH
Q 000432 697 -KAYVPQSPWILT-GNIRENILFGNQY------------DSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQK 762 (1513)
Q Consensus 697 -~ayv~Q~~~l~~-~ti~eNI~fg~~~------------~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQk 762 (1513)
++|++|++.++. .|++||+.++... .++..+++.+. ++.+ |........+.+||||||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------l~~~--~l~~~~~~~~~~LS~G~~ 150 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAA------LERV--GLLDKAYQRADQLSGGQQ 150 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHH------HHHc--CChhhhCCCcccCCHHHH
Confidence 689999998876 6999999875321 11111111111 1111 122234556779999999
Q ss_pred HHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecCh
Q 000432 763 QRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRF 839 (1513)
Q Consensus 763 qRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~ 839 (1513)
||++||||++.+|+++||||||++||+++.+.+.+ .+..+. .++|+|++||+++.+. .||+|++|++|++++.|++
T Consensus 151 qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~ 229 (241)
T cd03256 151 QRVAIARALMQQPKLILADEPVASLDPASSRQVMD-LLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPP 229 (241)
T ss_pred HHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCH
Confidence 99999999999999999999999999999887765 565543 3799999999999987 5999999999999999999
Q ss_pred HHHH
Q 000432 840 EELL 843 (1513)
Q Consensus 840 ~~l~ 843 (1513)
+++.
T Consensus 230 ~~~~ 233 (241)
T cd03256 230 AELT 233 (241)
T ss_pred HHhh
Confidence 8863
No 410
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.3e-35 Score=298.36 Aligned_cols=197 Identities=27% Similarity=0.431 Sum_probs=175.5
Q ss_pred EEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCccc
Q 000432 1270 RYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLF 1349 (1513)
Q Consensus 1270 ~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF 1349 (1513)
+|.....++|+++||++.+||.++|.||||||||||++.+.-+..|++|.++..|.|+++++++.+|++++|+-|.|.||
T Consensus 10 ~y~a~~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLf 89 (223)
T COG4619 10 GYLAGDAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALF 89 (223)
T ss_pred HhhcCCCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCcccc
Confidence 46555667999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCcHhhccC-CC----CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEec
Q 000432 1350 DGTVRGNLD-PL----VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDE 1424 (1513)
Q Consensus 1350 ~gTIR~NLd-p~----~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDE 1424 (1513)
.+||.+|+- |. ...+...-.+-|+++++.+.+ +..+..+||||||||++|+|-|---|+||+|||
T Consensus 90 g~tVeDNlifP~~~r~rr~dr~aa~~llar~~l~~~~----------L~k~it~lSGGE~QriAliR~Lq~~P~ILLLDE 159 (223)
T COG4619 90 GDTVEDNLIFPWQIRNRRPDRAAALDLLARFALPDSI----------LTKNITELSGGEKQRIALIRNLQFMPKILLLDE 159 (223)
T ss_pred ccchhhccccchHHhccCCChHHHHHHHHHcCCchhh----------hcchhhhccchHHHHHHHHHHhhcCCceEEecC
Confidence 999999995 32 234445566777888876654 233456799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhh-HhhcCEEEEEeCCEEeE
Q 000432 1425 ATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHT-VIDSDLVLVLSDGRIAE 1476 (1513)
Q Consensus 1425 aTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~t-i~~~DrIlVLd~G~IvE 1476 (1513)
+||+||..+.+.|.+.|.+.+ ++..++-|||+-.. ++.+||++-+..|++-|
T Consensus 160 ~TsALD~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~~~ 214 (223)
T COG4619 160 ITSALDESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHAGE 214 (223)
T ss_pred chhhcChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCcccc
Confidence 999999999999999999888 57899999999988 88899999999998744
No 411
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=3.2e-35 Score=319.27 Aligned_cols=166 Identities=35% Similarity=0.652 Sum_probs=151.2
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe------------EEE
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------KAY 699 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------~ay 699 (1513)
|+++|++++|+.. ..++++|+||++++||+++|+|+||||||||+++|+|+++|.+|+|.++|. ++|
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 79 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDLEKALSSLISV 79 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHHHHHHHhhEEE
Confidence 4689999999642 247999999999999999999999999999999999999999999999984 699
Q ss_pred EcCCCcccCccHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCEEE
Q 000432 700 VPQSPWILTGNIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYL 779 (1513)
Q Consensus 700 v~Q~~~l~~~ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~ill 779 (1513)
++|+|++++.|++||| ..+||||||||++||||++++|+++|
T Consensus 80 ~~q~~~~~~~tv~~~i--------------------------------------~~~LS~G~~qrv~laral~~~p~~ll 121 (178)
T cd03247 80 LNQRPYLFDTTLRNNL--------------------------------------GRRFSGGERQRLALARILLQDAPIVL 121 (178)
T ss_pred EccCCeeecccHHHhh--------------------------------------cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9999999999999998 46899999999999999999999999
Q ss_pred eeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCeEEEec
Q 000432 780 LDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGRIAQAG 837 (1513)
Q Consensus 780 LDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g 837 (1513)
|||||++||+++.+.+++ .+..+.+++|+|++||+++.++.||++++|++|++++.|
T Consensus 122 lDEP~~~LD~~~~~~l~~-~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 122 LDEPTVGLDPITERQLLS-LIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EECCcccCCHHHHHHHHH-HHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 999999999999777764 565555689999999999999889999999999998754
No 412
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.6e-35 Score=332.37 Aligned_cols=190 Identities=31% Similarity=0.455 Sum_probs=155.8
Q ss_pred EEEEeEEEEeCCCC-CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC---------------
Q 000432 632 VEVVNGKFSWNPES-SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG--------------- 695 (1513)
Q Consensus 632 I~~~~~sf~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g--------------- 695 (1513)
++++|++++|+... .+++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 46889999996421 14799999999999999999999999999999999999999999999876
Q ss_pred --eEEEEcCCCcccCc-cHHHHHccCCCCC---c----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHH
Q 000432 696 --TKAYVPQSPWILTG-NIRENILFGNQYD---S----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRI 765 (1513)
Q Consensus 696 --~~ayv~Q~~~l~~~-ti~eNI~fg~~~~---~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi 765 (1513)
.++|++|++.++.. |++||+.++..+. . ++.++.++..++ .........+||||||||+
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv 149 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERRERAEELLERVGL-----------GDRLNHYPSELSGGQQQRV 149 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCC-----------chhhhcChhhcCHHHHHHH
Confidence 26999999998876 9999999864321 1 112222222222 2233455678999999999
Q ss_pred HHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCccccCCEEEEEeCCeE
Q 000432 766 QIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILK--DKSVLYVTHQVEFLPAADIILVMENGRI 833 (1513)
Q Consensus 766 ~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~--~~TvilvtH~~~~l~~~d~i~vl~~G~i 833 (1513)
+||||++.+|+++||||||++||+++.+.+. +.+..+.+ ++|+|+|||+++.+..||+|++|++|++
T Consensus 150 ~la~al~~~p~lllLDEP~~~LD~~~~~~l~-~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 150 AIARALANDPKIILADEPTGNLDSETGKEVM-ELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHHHHHccCCCEEEEcCCcccCCHHHHHHHH-HHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 9999999999999999999999999977775 45665543 7999999999998878999999999974
No 413
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=4.8e-35 Score=332.55 Aligned_cols=203 Identities=25% Similarity=0.428 Sum_probs=167.1
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe------------EEE
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------KAY 699 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------~ay 699 (1513)
++++|++++|+. +++|+|+||+|++|++++|+|+||||||||+++|+|.++|++|+|.++|. ++|
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~~~~i~~ 78 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAALARLGV 78 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhhhhhEEE
Confidence 678999999963 47999999999999999999999999999999999999999999999873 689
Q ss_pred EcCCCcc-cCccHHHHHccCCCC---CchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCC
Q 000432 700 VPQSPWI-LTGNIRENILFGNQY---DSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDA 775 (1513)
Q Consensus 700 v~Q~~~l-~~~ti~eNI~fg~~~---~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~ 775 (1513)
++|++.+ +..|++||+.++... ..+...+.+. +-++.+ |.......+..+||||||||++||||++++|
T Consensus 79 ~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~-----~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~p 151 (236)
T TIGR03864 79 VFQQPTLDLDLSVRQNLRYHAALHGLSRAEARERIA-----ALLARL--GLAERADDKVRELNGGHRRRVEIARALLHRP 151 (236)
T ss_pred eCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHHHHH-----HHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 9999987 467999999875321 1111111111 112222 3333455667799999999999999999999
Q ss_pred CEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000432 776 DIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 776 ~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
+++||||||++||+.+.+.+.+ .+..+. +++|+|++||+++.+..||+|++|++|++++.|+.+++.+.
T Consensus 152 ~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 152 ALLLLDEPTVGLDPASRAAIVA-HVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CEEEEcCCccCCCHHHHHHHHH-HHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 9999999999999999887764 565554 47999999999999888999999999999999999888754
No 414
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-35 Score=324.86 Aligned_cols=196 Identities=25% Similarity=0.370 Sum_probs=172.2
Q ss_pred eEEEEEEEEEEcCCC-------CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChH
Q 000432 1261 TISFHNLQIRYAEHL-------PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~-------~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~ 1333 (1513)
-++.+|++..|+... -.+++||||+|++||.+||||.|||||||+.++|.|+++|++|+|+++|.|+..++
T Consensus 4 ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i~~~~-- 81 (268)
T COG4608 4 LLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDITKLS-- 81 (268)
T ss_pred eEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcchhhcc--
Confidence 478999999996432 25899999999999999999999999999999999999999999999999988766
Q ss_pred HhhhceEEEcCCCccccCcHhhccCCCCCCCHHHHHHHHHHcCCcH-HHHhhhccccchhccCCCCCChhHHHHHHHHHH
Q 000432 1334 DLRSRLGIIPQDPTLFDGTVRGNLDPLVQYSDKQVWEALDKCQLGD-LVRAKEEKLDSTVAENGENWSVGQRQLFCLGRT 1412 (1513)
Q Consensus 1334 ~LR~~isiVpQdp~LF~gTIR~NLdp~~~~sdeei~~aL~~~~l~~-~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARA 1412 (1513)
.+-.++++.+.|+.+++.+ +..+.| ..||||||||++||||
T Consensus 82 ---------------------------~~~~~~~v~elL~~Vgl~~~~~~ryP-----------helSGGQrQRi~IARA 123 (268)
T COG4608 82 ---------------------------KEERRERVLELLEKVGLPEEFLYRYP-----------HELSGGQRQRIGIARA 123 (268)
T ss_pred ---------------------------hhHHHHHHHHHHHHhCCCHHHhhcCC-----------cccCchhhhhHHHHHH
Confidence 1223567999999999876 444444 3589999999999999
Q ss_pred HccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcCCh
Q 000432 1413 LLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLEREDS 1489 (1513)
Q Consensus 1413 LLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~~~ 1489 (1513)
|.-+|+++|+|||||+||.-..++|.+.+++.- .+-|.++|+|+++.+.. ||||.||..|+|||.|+-+++.+++.-
T Consensus 124 Lal~P~liV~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE~g~~~~~~~~p~H 203 (268)
T COG4608 124 LALNPKLIVADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEIGPTEEVFSNPLH 203 (268)
T ss_pred HhhCCcEEEecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeEecCHHHHhhCCCC
Confidence 999999999999999999999999999887643 37899999999999998 999999999999999999999998877
Q ss_pred HHHHHHH
Q 000432 1490 FFSQLIK 1496 (1513)
Q Consensus 1490 ~f~~l~~ 1496 (1513)
.|-+..-
T Consensus 204 pYTk~Ll 210 (268)
T COG4608 204 PYTKALL 210 (268)
T ss_pred HHHHHHH
Confidence 7765443
No 415
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=3.7e-35 Score=368.43 Aligned_cols=212 Identities=19% Similarity=0.229 Sum_probs=184.9
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++|++++|+.. .+|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+..++|++++
T Consensus 3 ~l~~~~l~~~~~~~--~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~ 80 (490)
T PRK10938 3 SLQISQGTFRLSDT--KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVS 80 (490)
T ss_pred eEEEEeEEEEcCCe--eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhc
Confidence 38999999999643 4999999999999999999999999999999999999999999999999988777788888999
Q ss_pred EEcCCCcc--c-------cCcHhhccCCCCCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHH
Q 000432 1341 IIPQDPTL--F-------DGTVRGNLDPLVQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGR 1411 (1513)
Q Consensus 1341 iVpQdp~L--F-------~gTIR~NLdp~~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LAR 1411 (1513)
++||+|.+ + .-|+++|+... ...++++.++++..++.+... .. ...||||||||++|||
T Consensus 81 ~~~q~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~l~~~~~-------~~----~~~LSgG~~qrv~la~ 148 (490)
T PRK10938 81 DEWQRNNTDMLSPGEDDTGRTTAEIIQDE-VKDPARCEQLAQQFGITALLD-------RR----FKYLSTGETRKTLLCQ 148 (490)
T ss_pred eeccCcchhhcccchhhccccHHHhcccc-hhHHHHHHHHHHHcCCHhhhh-------CC----cccCCHHHHHHHHHHH
Confidence 99999753 2 45899998642 123456788888888765432 22 3469999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhc
Q 000432 1412 TLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLER 1486 (1513)
Q Consensus 1412 ALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~ 1486 (1513)
||+++|++|+|||||++||+++.+.+.+.|++.. +++|||+|+|+++.+.+ ||+|++|++|++++.|++++++++
T Consensus 149 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 225 (490)
T PRK10938 149 ALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQ 225 (490)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcc
Confidence 9999999999999999999999999999998764 36899999999999877 999999999999999999998764
No 416
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.8e-35 Score=331.43 Aligned_cols=202 Identities=29% Similarity=0.475 Sum_probs=163.3
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------------E
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT--------------K 697 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~--------------~ 697 (1513)
++++|++++|+. .++|+|+||++++|++++|+||||||||||+++|.|+++|++|+|.++|. +
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 468999999963 47999999999999999999999999999999999999999999999872 6
Q ss_pred EEEcCCCcccCc-cHHHHHccCCCCC-chHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCC
Q 000432 698 AYVPQSPWILTG-NIRENILFGNQYD-SCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDA 775 (1513)
Q Consensus 698 ayv~Q~~~l~~~-ti~eNI~fg~~~~-~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~ 775 (1513)
+|++|++.++.. |++||+.++.... ....++.++ .+.+.+..++ .....+..+||||||||++||||+..+|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~--~~l~~~~~l~----~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKARLE--RVYELFPRLK----ERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHHHH--HHHHHHHhhh----hhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999988876 9999998875432 111111111 1111111121 2234566789999999999999999999
Q ss_pred CEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHH
Q 000432 776 DIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELL 843 (1513)
Q Consensus 776 ~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~ 843 (1513)
+++||||||++||+++.+.+.+ .++.+. +++|+|++||+++.+.. ||+|++|++|++++.|+.+++.
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFE-AIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 9999999999999999777764 565543 57899999999998755 9999999999999999988765
No 417
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=6.8e-33 Score=377.43 Aligned_cols=216 Identities=21% Similarity=0.324 Sum_probs=190.3
Q ss_pred ceEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhce
Q 000432 1260 GTISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRL 1339 (1513)
Q Consensus 1260 g~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~i 1339 (1513)
..|+++|++++|+++...+|+|+||++++||.+||+|++|||||||+++|.|+++|++|+|.++|.|+.+ .....|+++
T Consensus 927 ~~L~I~nLsK~y~~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~PtsG~I~i~G~dI~~-~~~~~r~~I 1005 (2272)
T TIGR01257 927 PGVCVKNLVKIFEPSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVLVGGKDIET-NLDAVRQSL 1005 (2272)
T ss_pred ceEEEEeEEEEecCCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCCCCceEEEECCEECcc-hHHHHhhcE
Confidence 3699999999996433469999999999999999999999999999999999999999999999999975 567789999
Q ss_pred EEEcCCCccccC-cHhhccCCC---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHH
Q 000432 1340 GIIPQDPTLFDG-TVRGNLDPL---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGR 1411 (1513)
Q Consensus 1340 siVpQdp~LF~g-TIR~NLdp~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LAR 1411 (1513)
|++||++.+|+. |++|||... ...+ ++++.+.++.+++.+... . ...+||||||||++|||
T Consensus 1006 G~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~~v~~lL~~vgL~~~~~-------~----~~~~LSGGqKQRLsLAr 1074 (2272)
T TIGR01257 1006 GMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRN-------E----EAQDLSGGMQRKLSVAI 1074 (2272)
T ss_pred EEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhc-------C----ChhhCCHHHHHHHHHHH
Confidence 999999999975 999999642 1122 345777888887765432 2 33579999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhcCCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHHhcC
Q 000432 1412 TLLKKSSILVLDEATASVDSATDGVIQKIISQEFKDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLLERE 1487 (1513)
Q Consensus 1412 ALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl~~~ 1487 (1513)
||+.+|+||+||||||+||+.+.+.+.+.|++..+++|||++||+++.+.. ||||++|++|++++.|++++|.++-
T Consensus 1075 ALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~~g~TIIltTHdmdea~~laDrI~iL~~GkL~~~Gs~~~Lk~~~ 1151 (2272)
T TIGR01257 1075 AFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYRSGRTIIMSTHHMDEADLLGDRIAIISQGRLYCSGTPLFLKNCF 1151 (2272)
T ss_pred HHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHHHhc
Confidence 999999999999999999999999999999998778999999999999875 9999999999999999999997653
No 418
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-35 Score=342.13 Aligned_cols=197 Identities=30% Similarity=0.419 Sum_probs=161.0
Q ss_pred EEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC-----------------e
Q 000432 634 VVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG-----------------T 696 (1513)
Q Consensus 634 ~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g-----------------~ 696 (1513)
++|+++.|+ ..++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 27 ~~~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~ 103 (269)
T cd03294 27 KEEILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKK 103 (269)
T ss_pred hhhhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCc
Confidence 446666664 24689999999999999999999999999999999999999999999876 3
Q ss_pred EEEEcCCCcccC-ccHHHHHccCCC---CCc----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHH
Q 000432 697 KAYVPQSPWILT-GNIRENILFGNQ---YDS----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIA 768 (1513)
Q Consensus 697 ~ayv~Q~~~l~~-~ti~eNI~fg~~---~~~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lA 768 (1513)
++|++|++.++. .|++||+.++.. .+. ++..++++.+++.+.. .....+||||||||++||
T Consensus 104 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Gq~qrv~lA 172 (269)
T cd03294 104 ISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWE-----------HKYPDELSGGMQQRVGLA 172 (269)
T ss_pred EEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHh-----------hCCcccCCHHHHHHHHHH
Confidence 699999999885 699999987532 111 2233344444443322 333458999999999999
Q ss_pred HHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHHHHhc
Q 000432 769 RAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 769 Ral~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
||++.+|+++||||||++||+.+.+.+.+ ++..+. .++|+|++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 173 ral~~~p~illLDEPt~~LD~~~~~~l~~-~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 173 RALAVDPDILLMDEAFSALDPLIRREMQD-ELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 99999999999999999999999877764 565543 3799999999999875 4999999999999999999998754
No 419
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=7.1e-35 Score=368.72 Aligned_cols=219 Identities=21% Similarity=0.385 Sum_probs=183.0
Q ss_pred eEEEEEEEEEEcCC--CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC-----CCcEEEEcCeeCCCCChH
Q 000432 1261 TISFHNLQIRYAEH--LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP-----TMGSIIIDNVDITKIGLH 1333 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~--~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep-----~~G~I~IDGvdI~~i~l~ 1333 (1513)
.|+++|++++|+.+ ..++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++...+..
T Consensus 5 ~l~~~~l~~~~~~~~~~~~~l~~isl~i~~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~ 84 (529)
T PRK15134 5 LLAIENLSVAFRQQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQ 84 (529)
T ss_pred eEEEeceEEEecCCCCceeeeeceEEEEeCCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHH
Confidence 58999999999642 23699999999999999999999999999999999999987 799999999999887654
Q ss_pred H---hh-hceEEEcCCCc--ccc-CcHhhccCC----CCCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCC
Q 000432 1334 D---LR-SRLGIIPQDPT--LFD-GTVRGNLDP----LVQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGEN 1398 (1513)
Q Consensus 1334 ~---LR-~~isiVpQdp~--LF~-gTIR~NLdp----~~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~n 1398 (1513)
+ .| +++++|||+|. ++. -|+++|+.. ....+ ++++.++++.+++.+... -+|. ...+
T Consensus 85 ~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~----~~~~----~~~~ 156 (529)
T PRK15134 85 TLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLSLHRGMRREAARGEILNCLDRVGIRQAAK----RLTD----YPHQ 156 (529)
T ss_pred HHHHHhcCceEEEecCchhhcCchhhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHH----HHhh----CCcc
Confidence 4 33 57999999985 443 489998752 11122 346778888888864211 1122 2357
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc--CCcEEEEeccChhhHhh-cCEEEEEeCCEEe
Q 000432 1399 WSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSDGRIA 1475 (1513)
Q Consensus 1399 LSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~G~Iv 1475 (1513)
||||||||++|||||+.+|++|+||||||+||+++.+.+.+.|++.. .++|||+|+|+++.+.+ ||||++|++|+++
T Consensus 157 LSgGe~qrv~iAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~ 236 (529)
T PRK15134 157 LSGGERQRVMIAMALLTRPELLIADEPTTALDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCV 236 (529)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCCccCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999999999998864 37899999999999876 9999999999999
Q ss_pred EecChhHHHhcC
Q 000432 1476 EYDSPTKLLERE 1487 (1513)
Q Consensus 1476 E~Gtp~eLl~~~ 1487 (1513)
+.|+++++++.+
T Consensus 237 ~~g~~~~~~~~~ 248 (529)
T PRK15134 237 EQNRAATLFSAP 248 (529)
T ss_pred EeCCHHHHhhCC
Confidence 999999997654
No 420
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=4e-35 Score=326.76 Aligned_cols=191 Identities=24% Similarity=0.375 Sum_probs=160.2
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-----------EEEE
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-----------KAYV 700 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-----------~ayv 700 (1513)
++++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|+|+.+|++|+|.++|. ++||
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 77 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKNIEALRRIGAL 77 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccchHHHHhhEEEe
Confidence 468999999953 57999999999999999999999999999999999999999999999873 6899
Q ss_pred cCCCccc-CccHHHHHccCCC---CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCC
Q 000432 701 PQSPWIL-TGNIRENILFGNQ---YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDAD 776 (1513)
Q Consensus 701 ~Q~~~l~-~~ti~eNI~fg~~---~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~ 776 (1513)
+|++.++ +.|++||+.++.. .++++.++.++..++.+.. ......||||||||++||||++.+|+
T Consensus 78 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~al~~~p~ 146 (208)
T cd03268 78 IEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSA-----------KKKVKGFSLGMKQRLGIALALLGNPD 146 (208)
T ss_pred cCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHH-----------hhhHhhCCHHHHHHHHHHHHHhcCCC
Confidence 9999887 5799999987532 2333444455555443322 33456899999999999999999999
Q ss_pred EEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEec
Q 000432 777 IYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAG 837 (1513)
Q Consensus 777 illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g 837 (1513)
++||||||++||+.+.+.+.+ .+.... +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 147 LLILDEPTNGLDPDGIKELRE-LILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred EEEECCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999877764 555543 58999999999999865 9999999999998765
No 421
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=4.1e-35 Score=332.33 Aligned_cols=202 Identities=25% Similarity=0.398 Sum_probs=164.3
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------------E
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT--------------K 697 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~--------------~ 697 (1513)
++++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|+|.++|++|+|.++|. +
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 468899999963 46999999999999999999999999999999999999999999999873 6
Q ss_pred EEEcCCCcccCc-cHHHHHccCCCC---CchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhc
Q 000432 698 AYVPQSPWILTG-NIRENILFGNQY---DSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQ 773 (1513)
Q Consensus 698 ayv~Q~~~l~~~-ti~eNI~fg~~~---~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~ 773 (1513)
+|++|++.++.+ |++||+.++.+. ..+...+.+ .+-++.+ |..........+||||||||++||||+..
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKEREEKL-----EELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHHHHH-----HHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 899999988876 999999875421 111111111 1112222 23334456667899999999999999999
Q ss_pred CCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000432 774 DADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLK 844 (1513)
Q Consensus 774 ~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~ 844 (1513)
+|+++||||||++||+.+.+.+.+ .++.+. +++|+|++||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~-~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQK-IIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999777764 555543 47899999999987654 99999999999999999888754
No 422
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-35 Score=337.24 Aligned_cols=204 Identities=22% Similarity=0.379 Sum_probs=167.7
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCcc--C---CCcEEEECCe---------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQ--K---MAGTVKISGT--------- 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~--~---~~G~i~~~g~--------- 696 (1513)
.++++|+++.|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++ | ++|+|.++|.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 5899999999963 479999999999999999999999999999999999987 3 5899988763
Q ss_pred ------EEEEcCCCcccCccHHHHHccCCCC----CchHHH----HHHHHHhcHHHHhhccCCCCccccCCCCCCChHHH
Q 000432 697 ------KAYVPQSPWILTGNIRENILFGNQY----DSCKYD----RTVEACALVKDFELFASGDLTEIGERGINMSGGQK 762 (1513)
Q Consensus 697 ------~ayv~Q~~~l~~~ti~eNI~fg~~~----~~~~~~----~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQk 762 (1513)
++|++|++.+++.|++||+.|+... +++..+ ++++..++.+.+ .+.....+.+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEV-------KDRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hhhhhCCcccCCHHHH
Confidence 5899999999999999999886422 111111 222222222211 1234567789999999
Q ss_pred HHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHH
Q 000432 763 QRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEE 841 (1513)
Q Consensus 763 qRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~ 841 (1513)
||++||||++++|+++||||||++||+++.+.+. +++..+.+++|+|+|||+++.+. .||+|++|++|++++.|++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~-~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 240 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIE-ELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNK 240 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHH-HHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999977664 56766666899999999999876 499999999999999999999
Q ss_pred HHhc
Q 000432 842 LLKQ 845 (1513)
Q Consensus 842 l~~~ 845 (1513)
+.++
T Consensus 241 ~~~~ 244 (259)
T PRK14274 241 MFSN 244 (259)
T ss_pred HhhC
Confidence 8654
No 423
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4.7e-35 Score=324.02 Aligned_cols=193 Identities=22% Similarity=0.288 Sum_probs=166.0
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|++ .++|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.. ....+|+++++
T Consensus 2 l~~~~l~~~~~~--~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~-~~~~~~~~i~~ 78 (200)
T PRK13540 2 LDVIELDFDYHD--QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKK-DLCTYQKQLCF 78 (200)
T ss_pred EEEEEEEEEeCC--eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCcccc-CHHHHHhheEE
Confidence 789999999964 359999999999999999999999999999999999999999999999999875 34568899999
Q ss_pred EcCCCccc-cCcHhhccCCCC--CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCC
Q 000432 1342 IPQDPTLF-DGTVRGNLDPLV--QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSS 1418 (1513)
Q Consensus 1342 VpQdp~LF-~gTIR~NLdp~~--~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ 1418 (1513)
+||++.++ ..|+++|+.... ...++++.++++..++.+.. |.++ .+||+|||||++||||++++|+
T Consensus 79 ~~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~----~~LS~G~~~rv~laral~~~p~ 147 (200)
T PRK13540 79 VGHRSGINPYLTLRENCLYDIHFSPGAVGITELCRLFSLEHLI-------DYPC----GLLSSGQKRQVALLRLWMSKAK 147 (200)
T ss_pred eccccccCcCCCHHHHHHHHHhcCcchHHHHHHHHHcCCchhh-------hCCh----hhcCHHHHHHHHHHHHHhcCCC
Confidence 99999987 579999996421 12344677788877765432 3333 3699999999999999999999
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEE
Q 000432 1419 ILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVIDSDLVLV 1468 (1513)
Q Consensus 1419 ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~~DrIlV 1468 (1513)
+|+|||||+++|..+.+.+.+.|++.. +++|+|+++|+.+.+.+||.-.+
T Consensus 148 ~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~~ 198 (200)
T PRK13540 148 LWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEEY 198 (200)
T ss_pred EEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhhc
Confidence 999999999999999999999999753 57899999999999999986553
No 424
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=6e-35 Score=326.56 Aligned_cols=195 Identities=22% Similarity=0.280 Sum_probs=168.0
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
.|+++|++++|++. ++++|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++... ..++.++
T Consensus 11 ~l~~~~l~~~~~~~--~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~---~~~~~i~ 85 (214)
T PRK13543 11 LLAAHALAFSRNEE--PVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG---DRSRFMA 85 (214)
T ss_pred eEEEeeEEEecCCc--eeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch---hhhhceE
Confidence 59999999999643 599999999999999999999999999999999999999999999999998752 4466899
Q ss_pred EEcCCCccccC-cHhhccCCC----CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHcc
Q 000432 1341 IIPQDPTLFDG-TVRGNLDPL----VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLK 1415 (1513)
Q Consensus 1341 iVpQdp~LF~g-TIR~NLdp~----~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr 1415 (1513)
++||+|.+|.+ |+++|+... +...++.+.++++..++.+. +++.+ .+||+|||||++||||+++
T Consensus 86 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~----~~LS~G~~qrv~laral~~ 154 (214)
T PRK13543 86 YLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGLAGY-------EDTLV----RQLSAGQKKRLALARLWLS 154 (214)
T ss_pred EeecCcccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHcCChhh-------ccCCh----hhCCHHHHHHHHHHHHHhc
Confidence 99999999987 999998532 22234456677877776433 33333 5699999999999999999
Q ss_pred CCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeC
Q 000432 1416 KSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSD 1471 (1513)
Q Consensus 1416 ~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~ 1471 (1513)
+|+||+|||||++||.++.+.+.+.+++.. +++|+|+++|+++.+.+ ||+|++++.
T Consensus 155 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 155 PAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 999999999999999999999999998653 47899999999999976 899999975
No 425
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-35 Score=338.49 Aligned_cols=200 Identities=29% Similarity=0.476 Sum_probs=165.9
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------------E
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT--------------K 697 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~--------------~ 697 (1513)
++++|++++|+. ..++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 678999999953 246999999999999999999999999999999999999999999998872 5
Q ss_pred EEEcCCCc--ccCccHHHHHccCCC---CCchH----HHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHH
Q 000432 698 AYVPQSPW--ILTGNIRENILFGNQ---YDSCK----YDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIA 768 (1513)
Q Consensus 698 ayv~Q~~~--l~~~ti~eNI~fg~~---~~~~~----~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lA 768 (1513)
+||+|+|. +++.|++|||.|+.. .+.+. .+++++.+++. .........||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLE-----------KYRHRSPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCH-----------HHhcCCcccCCHHHHHHHHHH
Confidence 89999986 567899999998642 12222 22233333332 223445678999999999999
Q ss_pred HHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000432 769 RAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 769 Ral~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
||++++|+++||||||++||+.+...+.+ .++.+. +|+|+|++||+++.++.||+|++|++|++++.|+.+++...
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~-~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLE-RIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999877765 455443 48999999999999888999999999999999999887643
No 426
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-35 Score=351.56 Aligned_cols=202 Identities=26% Similarity=0.405 Sum_probs=167.5
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-----------EE
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-----------KA 698 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-----------~a 698 (1513)
..++++|++++|+. .++|+|+||++++|++++|+|||||||||||++|.|+.+|++|+|.++|. ++
T Consensus 18 ~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~~~r~ig 94 (377)
T PRK11607 18 PLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPPYQRPIN 94 (377)
T ss_pred ceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHCCEE
Confidence 46999999999963 46999999999999999999999999999999999999999999999984 69
Q ss_pred EEcCCCcccCc-cHHHHHccCCC---CCchH----HHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHH
Q 000432 699 YVPQSPWILTG-NIRENILFGNQ---YDSCK----YDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARA 770 (1513)
Q Consensus 699 yv~Q~~~l~~~-ti~eNI~fg~~---~~~~~----~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARa 770 (1513)
||+|++-+|.. ||.|||.|+.. .+... ..+.++..++.+ .......+|||||||||+||||
T Consensus 95 ~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~-----------~~~~~~~~LSgGq~QRVaLARA 163 (377)
T PRK11607 95 MMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQE-----------FAKRKPHQLSGGQRQRVALARS 163 (377)
T ss_pred EEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-----------hhcCChhhCCHHHHHHHHHHHH
Confidence 99999999965 99999999743 22222 222233333322 1233456899999999999999
Q ss_pred HhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCcc-ccCCEEEEEeCCeEEEecChHHHHhcC
Q 000432 771 VYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFL-PAADIILVMENGRIAQAGRFEELLKQN 846 (1513)
Q Consensus 771 l~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l-~~~d~i~vl~~G~i~~~g~~~~l~~~~ 846 (1513)
++.+|+++|||||||+||+...+.+.+. +..+. .+.|+|+|||+.+.+ ..||+|++|++|++++.|+++|+..+.
T Consensus 164 L~~~P~lLLLDEP~s~LD~~~r~~l~~~-l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~p 241 (377)
T PRK11607 164 LAKRPKLLLLDEPMGALDKKLRDRMQLE-VVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEHP 241 (377)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHH-HHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhCC
Confidence 9999999999999999999998777543 44333 379999999999985 559999999999999999999998653
No 427
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-35 Score=337.98 Aligned_cols=205 Identities=22% Similarity=0.396 Sum_probs=169.5
Q ss_pred cceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccC-----CCcEEEECC--------
Q 000432 629 EFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQK-----MAGTVKISG-------- 695 (1513)
Q Consensus 629 ~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~-----~~G~i~~~g-------- 695 (1513)
...|+++|++++|+. +++|+|+||+|++|++++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 457999999999963 4799999999999999999999999999999999999974 899999887
Q ss_pred -------eEEEEcCCCcccCccHHHHHccCCCC-----Cc----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCCh
Q 000432 696 -------TKAYVPQSPWILTGNIRENILFGNQY-----DS----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSG 759 (1513)
Q Consensus 696 -------~~ayv~Q~~~l~~~ti~eNI~fg~~~-----~~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSG 759 (1513)
.++|++|+|.++..|++||+.|+..+ .. ++.++.++.+++.+++. +.....+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCH
Confidence 25899999999988999999876321 11 11233333333322211 234566788999
Q ss_pred HHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecC
Q 000432 760 GQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGR 838 (1513)
Q Consensus 760 GQkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~ 838 (1513)
|||||++||||++.+|+++||||||++||+.+.+.+. +++..+.+++|+|++||+++.+.. ||++++|++|++++.|+
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~-~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~ 245 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVE-ELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGD 245 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHH-HHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCC
Confidence 9999999999999999999999999999999977665 567666567899999999999855 99999999999999999
Q ss_pred hHHHHh
Q 000432 839 FEELLK 844 (1513)
Q Consensus 839 ~~~l~~ 844 (1513)
.+++..
T Consensus 246 ~~~~~~ 251 (267)
T PRK14235 246 TEKMFT 251 (267)
T ss_pred HHHHHh
Confidence 988864
No 428
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=4e-35 Score=329.20 Aligned_cols=194 Identities=22% Similarity=0.379 Sum_probs=158.6
Q ss_pred EEEEeEEEEeCCCCC-CCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC------------eEE
Q 000432 632 VEVVNGKFSWNPESS-SPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG------------TKA 698 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~-~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g------------~~a 698 (1513)
++++|++++|+.... .++|+|+||++++|++++|+|+||||||||+++|.|+++|++|+|.++| .++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~ 81 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVKEPAEARRRLG 81 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEcccCHHHHHhhEE
Confidence 678999999964211 2699999999999999999999999999999999999999999999987 369
Q ss_pred EEcCCCcccCc-cHHHHHccCCC---CCc----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHH
Q 000432 699 YVPQSPWILTG-NIRENILFGNQ---YDS----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARA 770 (1513)
Q Consensus 699 yv~Q~~~l~~~-ti~eNI~fg~~---~~~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARa 770 (1513)
|++|++.++.. |++||+.+... .+. ++..+.++..++ .........+||||||||++||||
T Consensus 82 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~lara 150 (218)
T cd03266 82 FVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLGM-----------EELLDRRVGGFSTGMRQKVAIARA 150 (218)
T ss_pred EecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-----------HHHHhhhhhhcCHHHHHHHHHHHH
Confidence 99999998875 99999976432 111 122223333332 223445677899999999999999
Q ss_pred HhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEec
Q 000432 771 VYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAG 837 (1513)
Q Consensus 771 l~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g 837 (1513)
++.+|+++||||||++||+.+.+.+.+ .+..+. +++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 151 l~~~p~illlDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 151 LVHDPPVLLLDEPTTGLDVMATRALRE-FIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HhcCCCEEEEcCCCcCCCHHHHHHHHH-HHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999999999999999777754 565543 47999999999998765 9999999999998754
No 429
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-35 Score=367.30 Aligned_cols=207 Identities=24% Similarity=0.349 Sum_probs=177.1
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCCh-HHhhhce
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGL-HDLRSRL 1339 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l-~~LR~~i 1339 (1513)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++...+. +.+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i 81 (501)
T PRK11288 4 YLSFDGIGKTFPG--VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGV 81 (501)
T ss_pred eEEEeeeEEEECC--EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCE
Confidence 4899999999964 359999999999999999999999999999999999999999999999999976543 3467889
Q ss_pred EEEcCCCccccC-cHhhccCCCC-----C-CC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHH
Q 000432 1340 GIIPQDPTLFDG-TVRGNLDPLV-----Q-YS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFC 1408 (1513)
Q Consensus 1340 siVpQdp~LF~g-TIR~NLdp~~-----~-~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~ 1408 (1513)
+||||+|.+|.+ |+++|+.... . .+ ++++.++++.+++.+. .+.. ..+||||||||++
T Consensus 82 ~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~----~~~LSgGq~qrv~ 150 (501)
T PRK11288 82 AIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDID-------PDTP----LKYLSIGQRQMVE 150 (501)
T ss_pred EEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCC-------cCCc----hhhCCHHHHHHHH
Confidence 999999998875 9999997421 1 12 2356677777776422 2333 3579999999999
Q ss_pred HHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecCh
Q 000432 1409 LGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSP 1480 (1513)
Q Consensus 1409 LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp 1480 (1513)
|||||+++|+||||||||++||+++.+.+.+.|++.. +++|+|+|+|+++.+.. ||+|++|++|++++.+++
T Consensus 151 laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~ 224 (501)
T PRK11288 151 IAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDD 224 (501)
T ss_pred HHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCc
Confidence 9999999999999999999999999999999998764 47899999999999876 999999999999987654
No 430
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-35 Score=340.59 Aligned_cols=203 Identities=25% Similarity=0.448 Sum_probs=165.8
Q ss_pred eEEEEeEEEEeCCCC--CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe------------
Q 000432 631 EVEVVNGKFSWNPES--SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------ 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------ 696 (1513)
.|+++|++++|++.. .+++|+|+||++++||+++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 478999999996321 247999999999999999999999999999999999999999999999873
Q ss_pred -----EEEEcCCC--cccCccHHHHHccCCC---CCchH----HHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHH
Q 000432 697 -----KAYVPQSP--WILTGNIRENILFGNQ---YDSCK----YDRTVEACALVKDFELFASGDLTEIGERGINMSGGQK 762 (1513)
Q Consensus 697 -----~ayv~Q~~--~l~~~ti~eNI~fg~~---~~~~~----~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQk 762 (1513)
++|++|+| .+++.|++|||.|+.. .+.+. .++.++.+++..+ .......+||||||
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~----------~~~~~~~~LSgGq~ 151 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSED----------LISKSPFELSGGQM 151 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChh----------HhhCCcccCCHHHH
Confidence 58999998 5778899999987632 22211 2222233332211 12345678999999
Q ss_pred HHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChH
Q 000432 763 QRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFE 840 (1513)
Q Consensus 763 qRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~ 840 (1513)
||++||||+..+|+++||||||++||+.+.+.+. +.+..+. +++|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 152 qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~-~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~ 230 (287)
T PRK13641 152 RRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMM-QLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPK 230 (287)
T ss_pred HHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHH-HHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 9999999999999999999999999999977765 4666553 4799999999999875 59999999999999999999
Q ss_pred HHHh
Q 000432 841 ELLK 844 (1513)
Q Consensus 841 ~l~~ 844 (1513)
++.+
T Consensus 231 ~~~~ 234 (287)
T PRK13641 231 EIFS 234 (287)
T ss_pred HHhc
Confidence 8764
No 431
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=2.8e-34 Score=372.02 Aligned_cols=216 Identities=24% Similarity=0.366 Sum_probs=146.6
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHh------ccCC----C-----------CCcE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIF------RIVE----P-----------TMGS 1319 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~------rl~e----p-----------~~G~ 1319 (1513)
.++++|++. ..|+|+|++|++||.+||+|++|||||||++-.+ ++.+ | -.--
T Consensus 612 ~l~l~~~~~-------~~Lk~vsl~Ip~Geiv~VtGvsGSGKSTLl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (924)
T TIGR00630 612 FLTLKGARE-------NNLKNITVSIPLGLFTCITGVSGSGKSTLINDTLYPALARRLNGAKTQPGRYKSIEGLEHLDKV 684 (924)
T ss_pred eEEEEeCcc-------CCcCceEEEEeCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhcccccCCCCcCccccccCCCce
Confidence 588999863 2599999999999999999999999999998332 1221 1 1123
Q ss_pred EEEcCeeCCCC---------C-hHHhhhceEEEcC------CCccccC--------------cHhhccCCC---------
Q 000432 1320 IIIDNVDITKI---------G-LHDLRSRLGIIPQ------DPTLFDG--------------TVRGNLDPL--------- 1360 (1513)
Q Consensus 1320 I~IDGvdI~~i---------~-l~~LR~~isiVpQ------dp~LF~g--------------TIR~NLdp~--------- 1360 (1513)
|.||-.+|..- + .+.+|.-++=.|+ .+-.|+- .+.-++.+.
T Consensus 685 v~vdQ~pi~~~~RS~~aTy~~~~d~iR~lfa~~~~a~~~g~~~~~FSfN~~~G~C~~C~G~G~~~~~~~f~~~~~~~C~~ 764 (924)
T TIGR00630 685 IHIDQSPIGRTPRSNPATYTGVFDEIRELFAETPEAKARGYTPGRFSFNVKGGRCEACQGDGVIKIEMHFLPDVYVPCEV 764 (924)
T ss_pred EEEecCCCCCCCCCchhhhhhhHHHHHHHHhcCCccccCCCChhhcCCCCCCCCCCCCccceEEEEEccCCCCcccCCCC
Confidence 55555555421 1 1235666655554 2334431 121111110
Q ss_pred ---CCCCHH-----------------HHHHHHHHc----CCcHHHHhh-hccccc-hhccCCCCCChhHHHHHHHHHHHc
Q 000432 1361 ---VQYSDK-----------------QVWEALDKC----QLGDLVRAK-EEKLDS-TVAENGENWSVGQRQLFCLGRTLL 1414 (1513)
Q Consensus 1361 ---~~~sde-----------------ei~~aL~~~----~l~~~I~~l-p~gLdt-~V~e~G~nLSgGQRQrl~LARALL 1414 (1513)
..+.+| .+.++++-. .+.+..+.+ .-||+. ..++....||||||||++|||||.
T Consensus 765 C~G~R~~~e~l~v~~~g~~i~dvl~~tv~e~~~f~~~~~~i~~~l~~L~~~gL~~l~l~~~~~tLSgGe~QRl~LA~aL~ 844 (924)
T TIGR00630 765 CKGKRYNRETLEVKYKGKNIADVLDMTVEEAYEFFEAVPSISRKLQTLCDVGLGYIKLGQPATTLSGGEAQRIKLAKELS 844 (924)
T ss_pred cCCceeChHHHhceeCCCCHHHHhCCcHHHHHHHHHhccchhHHHHHHHHcCCCchhhcCccccCCHHHHHHHHHHHHHh
Confidence 011111 011111111 011111111 015554 367778899999999999999999
Q ss_pred c---CCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEE------eCCEEeEecChhHH
Q 000432 1415 K---KSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVIDSDLVLVL------SDGRIAEYDSPTKL 1483 (1513)
Q Consensus 1415 r---~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~~DrIlVL------d~G~IvE~Gtp~eL 1483 (1513)
+ +|+++||||||++||+++...+.+.|++.. ++.|||+|+|+++.+..||+|++| ++|+|++.|+|+++
T Consensus 845 ~~~~~p~llILDEPtsgLD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~~i~~aD~ii~Lgp~~G~~gG~iv~~G~~~~l 923 (924)
T TIGR00630 845 KRSTGRTLYILDEPTTGLHFDDIKKLLEVLQRLVDQGNTVVVIEHNLDVIKTADYIIDLGPEGGDGGGTIVASGTPEEV 923 (924)
T ss_pred hcCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEecCCccCCCCEEEEeCCHHHh
Confidence 7 589999999999999999999999998865 478999999999999999999999 79999999999886
No 432
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=5e-35 Score=343.48 Aligned_cols=201 Identities=26% Similarity=0.449 Sum_probs=166.2
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe------------E
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------K 697 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------~ 697 (1513)
..++++|++++|++ ..+|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 6 ~~i~i~~l~k~~~~---~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~~~~~~~i 82 (306)
T PRK13537 6 APIDFRNVEKRYGD---KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRARHARQRV 82 (306)
T ss_pred ceEEEEeEEEEECC---eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccchHHHHhcE
Confidence 46999999999963 47999999999999999999999999999999999999999999999873 6
Q ss_pred EEEcCCCcccC-ccHHHHHcc-CCCC--CchHHH----HHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHH
Q 000432 698 AYVPQSPWILT-GNIRENILF-GNQY--DSCKYD----RTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIAR 769 (1513)
Q Consensus 698 ayv~Q~~~l~~-~ti~eNI~f-g~~~--~~~~~~----~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lAR 769 (1513)
|||||++.++. .|++||+.| +.-+ +..... ++++.++ +++..++.+ .+||||||||++|||
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-------l~~~~~~~~----~~LS~G~~qrl~la~ 151 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAK-------LENKADAKV----GELSGGMKRRLTLAR 151 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-------CchHhcCch----hhCCHHHHHHHHHHH
Confidence 99999998885 699999985 3211 212111 2222222 222233333 479999999999999
Q ss_pred HHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000432 770 AVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 770 al~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
|+.++|++++|||||++||+.+.+.+++ .+..+. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 aL~~~P~lllLDEPt~gLD~~~~~~l~~-~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 152 ALVNDPDVLVLDEPTTGLDPQARHLMWE-RLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred HHhCCCCEEEEeCCCcCCCHHHHHHHHH-HHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 9999999999999999999999887765 566553 48999999999999865 999999999999999999998654
No 433
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-35 Score=341.90 Aligned_cols=208 Identities=23% Similarity=0.392 Sum_probs=165.8
Q ss_pred ceEEEEeEEEEeCCCC--CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC------------
Q 000432 630 FEVEVVNGKFSWNPES--SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG------------ 695 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g------------ 695 (1513)
..|+++|++++|+... ..++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 4689999999996431 13699999999999999999999999999999999999999999998876
Q ss_pred ------eEEEEcCCC--cccCccHHHHHccCCCC---CchH-HHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHH
Q 000432 696 ------TKAYVPQSP--WILTGNIRENILFGNQY---DSCK-YDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQ 763 (1513)
Q Consensus 696 ------~~ayv~Q~~--~l~~~ti~eNI~fg~~~---~~~~-~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkq 763 (1513)
.++||+|+| .+++.|++|||.|+... ..+. .+++. .+.+.+ .++.+ .......+|||||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~---~ll~~~-~L~~~---~~~~~~~~LS~Gq~q 157 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVP---ELLKLV-QLPED---YVKRSPFELSGGQKR 157 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHH---HHHHHc-CCChh---HhcCChhhCCHHHHH
Confidence 268999998 46778999999986421 1111 11111 111111 12211 234566789999999
Q ss_pred HHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChH
Q 000432 764 RIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFE 840 (1513)
Q Consensus 764 Ri~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~ 840 (1513)
|++||||++.+|+++||||||++||+.+.+.+. +.+..+. .++|+|+|||+++.+. .||+|++|++|++++.|+++
T Consensus 158 rv~laral~~~p~lLlLDEPt~~LD~~~~~~l~-~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 236 (289)
T PRK13645 158 RVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFI-NLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPF 236 (289)
T ss_pred HHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHH-HHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999977775 4565553 3799999999999875 59999999999999999998
Q ss_pred HHHhc
Q 000432 841 ELLKQ 845 (1513)
Q Consensus 841 ~l~~~ 845 (1513)
++.+.
T Consensus 237 ~~~~~ 241 (289)
T PRK13645 237 EIFSN 241 (289)
T ss_pred HHhcC
Confidence 87653
No 434
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-35 Score=336.89 Aligned_cols=206 Identities=25% Similarity=0.396 Sum_probs=171.0
Q ss_pred cceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCcc-----CCCcEEEECC--------
Q 000432 629 EFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQ-----KMAGTVKISG-------- 695 (1513)
Q Consensus 629 ~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~-----~~~G~i~~~g-------- 695 (1513)
...++++|++++|+ ++++|+|+||++++||+++|+|+||||||||+++|.|+++ |++|+|.++|
T Consensus 18 ~~~l~~~nl~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~ 94 (267)
T PRK14237 18 EIALSTKDLHVYYG---KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEI 94 (267)
T ss_pred CeEEEEeeEEEEEC---CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccC
Confidence 34799999999995 2579999999999999999999999999999999999996 5899998877
Q ss_pred -------eEEEEcCCCcccCccHHHHHccCCCC----Cc----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChH
Q 000432 696 -------TKAYVPQSPWILTGNIRENILFGNQY----DS----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGG 760 (1513)
Q Consensus 696 -------~~ayv~Q~~~l~~~ti~eNI~fg~~~----~~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGG 760 (1513)
.++||+|++.++..|++|||.++... ++ ++..++++.+++.+++ .+..+..+.+||||
T Consensus 95 ~~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~G 167 (267)
T PRK14237 95 NVYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQV-------KDDLHKSALTLSGG 167 (267)
T ss_pred ChHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchh-------hhhhcCCcccCCHH
Confidence 26999999999999999999986321 11 1122333444433222 13456677899999
Q ss_pred HHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecCh
Q 000432 761 QKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRF 839 (1513)
Q Consensus 761 QkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~ 839 (1513)
||||++||||++++|+++||||||++||+.+.+.+. +++..+.+++|+|++||+++.+. .||+|++|++|++++.|+.
T Consensus 168 ~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~-~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~ 246 (267)
T PRK14237 168 QQQRLCIARAIAVKPDILLMDEPASALDPISTMQLE-ETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKT 246 (267)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999977775 46666656799999999999875 5999999999999999999
Q ss_pred HHHHhc
Q 000432 840 EELLKQ 845 (1513)
Q Consensus 840 ~~l~~~ 845 (1513)
+++.+.
T Consensus 247 ~~~~~~ 252 (267)
T PRK14237 247 RNIFTN 252 (267)
T ss_pred HHHhcC
Confidence 998653
No 435
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.4e-35 Score=303.70 Aligned_cols=192 Identities=23% Similarity=0.398 Sum_probs=166.4
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC----------------
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG---------------- 695 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g---------------- 695 (1513)
|+|+||+..|+.. +++|+||||+|++||++-++||||||||||+++|.|+..|+.|+|.++|
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7899999999753 6799999999999999999999999999999999999999999999998
Q ss_pred eEEEEcCCCcccC-ccHHHHHccCCCC---Cch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHH
Q 000432 696 TKAYVPQSPWILT-GNIRENILFGNQY---DSC----KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQI 767 (1513)
Q Consensus 696 ~~ayv~Q~~~l~~-~ti~eNI~fg~~~---~~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~l 767 (1513)
++|+|+|+.-|.. -||.||+.|.... .+. +..++++..+|.+-...|| ..|||||||||+|
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP-----------~~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALP-----------SQLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCc-----------cccCchHHHHHHH
Confidence 3699999997765 5999999996532 233 3445666677777777776 4799999999999
Q ss_pred HHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEec
Q 000432 768 ARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGI-LKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAG 837 (1513)
Q Consensus 768 ARal~~~~~illLDep~salD~~~~~~i~~~~~~~~-~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g 837 (1513)
|||+..+|+++|-||||-+|||.++..|++ ++..+ ..|.||+++||+.+.+.. --+++.+++|+++...
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~-lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~ 219 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMR-LFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDE 219 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHH-HHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecc
Confidence 999999999999999999999999999985 45444 469999999999999877 4689999999998643
No 436
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-35 Score=340.12 Aligned_cols=201 Identities=23% Similarity=0.447 Sum_probs=168.3
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------- 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------- 696 (1513)
.++++|++++|+. ++++|+|+||+|++||+++|+|+||||||||+++|+|.++|.+|+|.++|.
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 5899999999963 257999999999999999999999999999999999999999999999873
Q ss_pred -EEEEcCCC--cccCccHHHHHccCCC---CCc----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHH
Q 000432 697 -KAYVPQSP--WILTGNIRENILFGNQ---YDS----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQ 766 (1513)
Q Consensus 697 -~ayv~Q~~--~l~~~ti~eNI~fg~~---~~~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~ 766 (1513)
++|++|+| .+++.|++||+.++.. +.. ++.++.++.+++.. .......+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-----------~~~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEH-----------LKDKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChh-----------hhhCCcccCCHHHHHHHH
Confidence 58999998 6788999999987532 121 12233333333322 223457799999999999
Q ss_pred HHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHHHH
Q 000432 767 IARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILK--DKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEELL 843 (1513)
Q Consensus 767 lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~--~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~l~ 843 (1513)
||||++.+|+++||||||++||+.+.+.+. +.+..+.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++.
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~-~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 230 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIM-KLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVF 230 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHH-HHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999987775 45655543 799999999999987 59999999999999999999987
Q ss_pred hc
Q 000432 844 KQ 845 (1513)
Q Consensus 844 ~~ 845 (1513)
+.
T Consensus 231 ~~ 232 (283)
T PRK13636 231 AE 232 (283)
T ss_pred cC
Confidence 54
No 437
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-35 Score=331.18 Aligned_cols=201 Identities=28% Similarity=0.423 Sum_probs=164.2
Q ss_pred EEEEeEEEEeCCCC-CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------------
Q 000432 632 VEVVNGKFSWNPES-SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------- 696 (1513)
Q Consensus 632 I~~~~~sf~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------- 696 (1513)
|+++|++++|+... ..++|+|+||+|++|++++|+||||||||||+++|+|.++|++|+|.++|.
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 67899999996321 127999999999999999999999999999999999999999999998763
Q ss_pred --EEEEcCCCcccC-ccHHHHHccCCC---CCchH----HHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHH
Q 000432 697 --KAYVPQSPWILT-GNIRENILFGNQ---YDSCK----YDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQ 766 (1513)
Q Consensus 697 --~ayv~Q~~~l~~-~ti~eNI~fg~~---~~~~~----~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~ 766 (1513)
++|++|++.++. .|++||+.++.. .+... ..+.++..++ .........+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVGL-----------EDKADAYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCC-----------hhhhhcChhhCCHHHHHHHH
Confidence 689999999986 699999987532 12111 1222222222 22334456789999999999
Q ss_pred HHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHH
Q 000432 767 IARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELL 843 (1513)
Q Consensus 767 lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~ 843 (1513)
||||+..+|+++||||||++||+.+.+.+. +.+..+. .++|+|++||+++.+.. ||++++|++|++++.|+.+++.
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~-~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSIL-ALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVF 229 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHH-HHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999977775 4565543 37899999999998765 9999999999999999988875
Q ss_pred h
Q 000432 844 K 844 (1513)
Q Consensus 844 ~ 844 (1513)
+
T Consensus 230 ~ 230 (233)
T cd03258 230 A 230 (233)
T ss_pred c
Confidence 4
No 438
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=3.8e-35 Score=328.15 Aligned_cols=188 Identities=32% Similarity=0.539 Sum_probs=154.0
Q ss_pred EEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------EEEEcCCCc
Q 000432 634 VVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT--------KAYVPQSPW 705 (1513)
Q Consensus 634 ~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~--------~ayv~Q~~~ 705 (1513)
++|++++|+. +++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|. ++|++|++.
T Consensus 2 ~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~i~~v~q~~~ 78 (213)
T cd03235 2 VEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLEKERKRIGYVPQRRS 78 (213)
T ss_pred cccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHHHHHhheEEeccccc
Confidence 5789999963 46999999999999999999999999999999999999999999999984 799999987
Q ss_pred c---cCccHHHHHccCCCC-------C----chHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHH
Q 000432 706 I---LTGNIRENILFGNQY-------D----SCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAV 771 (1513)
Q Consensus 706 l---~~~ti~eNI~fg~~~-------~----~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal 771 (1513)
+ ++.|++||+.++... . +++.+++++.+++.+.. .....+||||||||++||||+
T Consensus 79 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv~la~al 147 (213)
T cd03235 79 IDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELA-----------DRQIGELSGGQQQRVLLARAL 147 (213)
T ss_pred cccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHH-----------hCCcccCCHHHHHHHHHHHHH
Confidence 6 568999999876431 1 12233344444443222 234568999999999999999
Q ss_pred hcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEec
Q 000432 772 YQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAG 837 (1513)
Q Consensus 772 ~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g 837 (1513)
..+|+++||||||++||+.+.+.+.+ .+..+. +++|+|++||+++++.. ||+|++|++| +++.|
T Consensus 148 ~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 148 VQDPDLLLLDEPFAGVDPKTQEDIYE-LLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999877764 555543 67999999999999865 9999999886 55544
No 439
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-35 Score=333.92 Aligned_cols=204 Identities=28% Similarity=0.407 Sum_probs=163.9
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------EE
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------KA 698 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~a 698 (1513)
++++|++++|++. .++|+|+||+|++|++++|+|+||||||||+++|.|+++|++|+|.++|. ++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4688999999642 46999999999999999999999999999999999999999999999873 58
Q ss_pred EEcCCCcccC-ccHHHHHccCCCC---CchHHHHHHHHHhcHHHHhhccCCCC--ccccCCCCCCChHHHHHHHHHHHHh
Q 000432 699 YVPQSPWILT-GNIRENILFGNQY---DSCKYDRTVEACALVKDFELFASGDL--TEIGERGINMSGGQKQRIQIARAVY 772 (1513)
Q Consensus 699 yv~Q~~~l~~-~ti~eNI~fg~~~---~~~~~~~v~~~~~l~~d~~~l~~Gd~--T~Ige~g~~LSGGQkqRi~lARal~ 772 (1513)
|++|+|.++. .|++||+.++..+ +.+..++. ..+.++.+ |.. ......+.+||||||||++||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~ 151 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIRER-----ADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALA 151 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHh
Confidence 9999999885 6999999876322 21111111 11112222 111 1234567899999999999999999
Q ss_pred cCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHHHHhc
Q 000432 773 QDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 773 ~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
++|+++||||||++||+.+.+.+. +.+..+. .++|+|++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 152 ~~p~llllDEPt~~LD~~~~~~l~-~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 152 ADPPLLLMDEPFGALDPITRDQLQ-EEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred cCCCEEEecCCcccCCHHHHHHHH-HHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 999999999999999999977665 4565543 3799999999999865 5999999999999999999887643
No 440
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=8.1e-34 Score=380.58 Aligned_cols=211 Identities=25% Similarity=0.298 Sum_probs=149.9
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHH---------HHhccCCCCCc--------EEEEc
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQ---------AIFRIVEPTMG--------SIIID 1323 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~---------lL~rl~ep~~G--------~I~ID 1323 (1513)
.++++|++. ..|+|+|++|++||.+||+|++|||||||++ .|.|...+..+ -|.||
T Consensus 600 ~L~l~~~~~-------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~id 672 (1809)
T PRK00635 600 TLTLSKATK-------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHIT 672 (1809)
T ss_pred eEEEecccc-------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEec
Confidence 588888762 2699999999999999999999999999999 44453322111 24555
Q ss_pred CeeCCCCCh----------HHhhh---------ce-----EEEcCC------------------C---------------
Q 000432 1324 NVDITKIGL----------HDLRS---------RL-----GIIPQD------------------P--------------- 1346 (1513)
Q Consensus 1324 GvdI~~i~l----------~~LR~---------~i-----siVpQd------------------p--------------- 1346 (1513)
-.+|..-+. +++|+ +. .+.+|. |
T Consensus 673 Qspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy~ 752 (1809)
T PRK00635 673 RDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRFL 752 (1809)
T ss_pred CCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCcccC
Confidence 554443211 14551 11 122221 1
Q ss_pred -----ccccC-cHhhccCCCCC-C-----CHHHHHHHHHHcCCcHHHHhhhccccch-hccCCCCCChhHHHHHHHHHHH
Q 000432 1347 -----TLFDG-TVRGNLDPLVQ-Y-----SDKQVWEALDKCQLGDLVRAKEEKLDST-VAENGENWSVGQRQLFCLGRTL 1413 (1513)
Q Consensus 1347 -----~LF~g-TIR~NLdp~~~-~-----sdeei~~aL~~~~l~~~I~~lp~gLdt~-V~e~G~nLSgGQRQrl~LARAL 1413 (1513)
+.+.+ ||.|||++... + +.+++.+.++ .++. -|++.. .+....+||||||||++|||||
T Consensus 753 ~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l~------~L~~--vGL~~l~l~q~~~tLSGGE~QRV~LAraL 824 (1809)
T PRK00635 753 PQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKIH------ALCS--LGLDYLPLGRPLSSLSGGEIQRLKLAYEL 824 (1809)
T ss_pred HHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHHH------HHHH--cCCcchhhcCccccCCHHHHHHHHHHHHH
Confidence 13333 77777764210 0 1223333221 1111 145443 4666778999999999999999
Q ss_pred c---cCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEEe------CCEEeEecChhHH
Q 000432 1414 L---KKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVIDSDLVLVLS------DGRIAEYDSPTKL 1483 (1513)
Q Consensus 1414 L---r~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~~DrIlVLd------~G~IvE~Gtp~eL 1483 (1513)
+ ++|++|||||||++||.++.+.+.+.|++.. ++.|||+|+|+++.+..||+|++|+ +|++++.|+|+++
T Consensus 825 ~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~~aDrVi~L~p~gg~~~G~iv~~Gtpeel 904 (1809)
T PRK00635 825 LAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSPEEL 904 (1809)
T ss_pred hhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEccCCCCCCCEEEEeCCHHHH
Confidence 8 5999999999999999999999999998764 4789999999999998899999996 8999999999999
Q ss_pred Hhc
Q 000432 1484 LER 1486 (1513)
Q Consensus 1484 l~~ 1486 (1513)
.+.
T Consensus 905 ~~~ 907 (1809)
T PRK00635 905 IHL 907 (1809)
T ss_pred Hhc
Confidence 864
No 441
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3.8e-35 Score=328.22 Aligned_cols=191 Identities=29% Similarity=0.428 Sum_probs=157.6
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-----------EEEE
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-----------KAYV 700 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-----------~ayv 700 (1513)
|+++|++++|+. +++|+|+||+|++|++++|+|+||||||||+++|+|+++|.+|+|.++|. ++|+
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~~~~i~~~ 77 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPKDRDIAMV 77 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcccceEEEE
Confidence 468999999963 47999999999999999999999999999999999999999999999872 6999
Q ss_pred cCCCcccC-ccHHHHHccCCC---CCchHH----HHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHh
Q 000432 701 PQSPWILT-GNIRENILFGNQ---YDSCKY----DRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVY 772 (1513)
Q Consensus 701 ~Q~~~l~~-~ti~eNI~fg~~---~~~~~~----~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~ 772 (1513)
+|++.++. .|++||+.++.. .+.+.. ++.++..++. ........+||||||||++||||++
T Consensus 78 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qr~~laral~ 146 (213)
T cd03301 78 FQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIE-----------HLLDRKPKQLSGGQRQRVALGRAIV 146 (213)
T ss_pred ecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCH-----------HHHhCChhhCCHHHHHHHHHHHHHh
Confidence 99999885 599999987632 222222 2222222222 2234455789999999999999999
Q ss_pred cCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEec
Q 000432 773 QDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAG 837 (1513)
Q Consensus 773 ~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g 837 (1513)
.+|+++||||||++||+++.+.+.+ .++.+. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 147 ~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 147 REPKVFLMDEPLSNLDAKLRVQMRA-ELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 9999999999999999999877764 565543 37999999999998765 9999999999998865
No 442
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-35 Score=338.45 Aligned_cols=203 Identities=25% Similarity=0.407 Sum_probs=168.9
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCC---cEEEECCe----------
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMA---GTVKISGT---------- 696 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~---G~i~~~g~---------- 696 (1513)
..++++|++|.|+.. ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++ |+|.++|.
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 368999999999642 3479999999999999999999999999999999999999988 89999873
Q ss_pred ---EEEEcCCCc--ccCccHHHHHccCCCC---Cch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHH
Q 000432 697 ---KAYVPQSPW--ILTGNIRENILFGNQY---DSC----KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQR 764 (1513)
Q Consensus 697 ---~ayv~Q~~~--l~~~ti~eNI~fg~~~---~~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqR 764 (1513)
++||+|+|+ +++.|++|||.|+... +.+ +.++.++.+++.+. ......+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDY-----------IDSEPANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhH-----------hcCCcccCCHHHHHH
Confidence 599999984 6688999999986422 222 23334444444332 334457899999999
Q ss_pred HHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHH
Q 000432 765 IQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEEL 842 (1513)
Q Consensus 765 i~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l 842 (1513)
++||||++++|+++||||||++||+.+.+.+.+ .+..+. .++|+|++||+++.+..||+|++|++|++++.|+++++
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~-~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 230 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILK-LIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEI 230 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999887765 565543 27899999999999888999999999999999999888
Q ss_pred Hhc
Q 000432 843 LKQ 845 (1513)
Q Consensus 843 ~~~ 845 (1513)
.+.
T Consensus 231 ~~~ 233 (282)
T PRK13640 231 FSK 233 (282)
T ss_pred hcC
Confidence 653
No 443
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-35 Score=335.46 Aligned_cols=204 Identities=24% Similarity=0.392 Sum_probs=166.8
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCcc--C---CCcEEEECC----------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQ--K---MAGTVKISG---------- 695 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~--~---~~G~i~~~g---------- 695 (1513)
.++++|++++|+. +++|+|+||+|++||+++|+|+||||||||+++|.|..+ | ++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999963 479999999999999999999999999999999999853 6 589999876
Q ss_pred -----eEEEEcCCCcccCccHHHHHccCCCC----CchHH----HHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHH
Q 000432 696 -----TKAYVPQSPWILTGNIRENILFGNQY----DSCKY----DRTVEACALVKDFELFASGDLTEIGERGINMSGGQK 762 (1513)
Q Consensus 696 -----~~ayv~Q~~~l~~~ti~eNI~fg~~~----~~~~~----~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQk 762 (1513)
.++||+|++.+++.|++||+.++... +++.. .++++.+++.+.+ .+.......+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEV-------KDRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhH-------HHHHhcCcccCCHHHH
Confidence 26899999999999999999875321 11111 1222223222111 1234566789999999
Q ss_pred HHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHH
Q 000432 763 QRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEE 841 (1513)
Q Consensus 763 qRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~ 841 (1513)
||++||||+..+|+++||||||++||+++.+.+. +.+..+.+++|+|++||+++.+. .||+|++|++|++++.|+.++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~-~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 233 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIE-ETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQ 233 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHH-HHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999988776 46666656799999999999875 599999999999999999999
Q ss_pred HHhc
Q 000432 842 LLKQ 845 (1513)
Q Consensus 842 l~~~ 845 (1513)
+.+.
T Consensus 234 ~~~~ 237 (252)
T PRK14239 234 MFMN 237 (252)
T ss_pred HHhC
Confidence 8654
No 444
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=329.21 Aligned_cols=196 Identities=25% Similarity=0.355 Sum_probs=161.6
Q ss_pred eEEEEeEEEEeCCCC-CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC--------------
Q 000432 631 EVEVVNGKFSWNPES-SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG-------------- 695 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g-------------- 695 (1513)
.++++|++++|+... ..++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999996422 14799999999999999999999999999999999999999999999987
Q ss_pred ---eEEEEcCCCcccCc-cHHHHHccCCC---CCchH----HHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHH
Q 000432 696 ---TKAYVPQSPWILTG-NIRENILFGNQ---YDSCK----YDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQR 764 (1513)
Q Consensus 696 ---~~ayv~Q~~~l~~~-ti~eNI~fg~~---~~~~~----~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqR 764 (1513)
.++|++|++.++.. |++||+.++.. .+.+. ..++++.+++ .........+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl-----------~~~~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGL-----------EHRANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-----------chhhhCChhhCCHHHHHH
Confidence 27899999988865 99999987421 22211 2222333222 233445567899999999
Q ss_pred HHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccccCCEEEEEeCCeEEEecC
Q 000432 765 IQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPAADIILVMENGRIAQAGR 838 (1513)
Q Consensus 765 i~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~ 838 (1513)
++||||++.+|+++||||||++||+.+.+.+. +.+..+. +++|+|++||+++.+..+|++++|++|++++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~-~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIF-QLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHH-HHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 99999999999999999999999999977775 4565543 4799999999999998889999999999998775
No 445
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-35 Score=340.10 Aligned_cols=204 Identities=21% Similarity=0.419 Sum_probs=165.7
Q ss_pred eEEEEeEEEEeCCCC--CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe------------
Q 000432 631 EVEVVNGKFSWNPES--SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------ 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~--~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------ 696 (1513)
.++++|++++|+... ..++|+|+||+|++|++++|+|+||||||||+++|+|.++|++|+|.++|.
T Consensus 2 ~l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~ 81 (280)
T PRK13649 2 GINLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIK 81 (280)
T ss_pred eEEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHH
Confidence 378999999996422 147999999999999999999999999999999999999999999999872
Q ss_pred -----EEEEcCCC--cccCccHHHHHccCCC---CCchHHHH----HHHHHhcHHHHhhccCCCCccccCCCCCCChHHH
Q 000432 697 -----KAYVPQSP--WILTGNIRENILFGNQ---YDSCKYDR----TVEACALVKDFELFASGDLTEIGERGINMSGGQK 762 (1513)
Q Consensus 697 -----~ayv~Q~~--~l~~~ti~eNI~fg~~---~~~~~~~~----v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQk 762 (1513)
++|++|+| .+++.|++|||.|+.. .+.+..++ +++..++.+ .....+..+||||||
T Consensus 82 ~~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~----------~~~~~~~~~LSgG~~ 151 (280)
T PRK13649 82 QIRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISE----------SLFEKNPFELSGGQM 151 (280)
T ss_pred HHHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCh----------hhhhCCcccCCHHHH
Confidence 68999998 6788999999987632 22222211 122222211 122455678999999
Q ss_pred HHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChH
Q 000432 763 QRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFE 840 (1513)
Q Consensus 763 qRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~ 840 (1513)
||++||||++.+|+++||||||++||+.+.+.+.+ .+..+. .++|+|++||+++.+.. ||+|++|++|++++.|+.+
T Consensus 152 qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (280)
T PRK13649 152 RRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMT-LFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPK 230 (280)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999777764 555543 47999999999998864 9999999999999999998
Q ss_pred HHHhc
Q 000432 841 ELLKQ 845 (1513)
Q Consensus 841 ~l~~~ 845 (1513)
++.+.
T Consensus 231 ~~~~~ 235 (280)
T PRK13649 231 DIFQD 235 (280)
T ss_pred HHhcC
Confidence 88653
No 446
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=8.6e-35 Score=333.08 Aligned_cols=196 Identities=27% Similarity=0.354 Sum_probs=163.5
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------EEEEc
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT--------KAYVP 701 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~--------~ayv~ 701 (1513)
..|+++|++++|+. +++|+|+||+|++|++++|+|+||||||||+++|+|.++|++|+|.++|. ++|++
T Consensus 11 ~~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~~~~~~i~~v~ 87 (257)
T PRK11247 11 TPLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLAEAREDTRLMF 87 (257)
T ss_pred CcEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHHHhhCceEEEe
Confidence 35999999999963 47999999999999999999999999999999999999999999999873 79999
Q ss_pred CCCcccC-ccHHHHHccCCCC-CchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCEEE
Q 000432 702 QSPWILT-GNIRENILFGNQY-DSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYL 779 (1513)
Q Consensus 702 Q~~~l~~-~ti~eNI~fg~~~-~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~ill 779 (1513)
|++.++. .|++||+.++... .+++..+.++..++.+ .......+||||||||++||||++++|+++|
T Consensus 88 q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LSgGqkqrl~laraL~~~p~lll 156 (257)
T PRK11247 88 QDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLAD-----------RANEWPAALSGGQKQRVALARALIHRPGLLL 156 (257)
T ss_pred cCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChh-----------HhcCChhhCCHHHHHHHHHHHHHhcCCCEEE
Confidence 9998886 6999999986421 1223333444443322 2344567899999999999999999999999
Q ss_pred eeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChH
Q 000432 780 LDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFE 840 (1513)
Q Consensus 780 LDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~ 840 (1513)
|||||++||+.+.+.+.+ .+..+. .++|+|+|||+++.+. .||+|++|++|++++.|+.+
T Consensus 157 LDEPt~~LD~~~~~~l~~-~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 157 LDEPLGALDALTRIEMQD-LIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EeCCCCCCCHHHHHHHHH-HHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 999999999999777764 565543 3789999999999875 49999999999999888754
No 447
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-35 Score=335.29 Aligned_cols=204 Identities=25% Similarity=0.423 Sum_probs=167.7
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcC---ccC--CCcEEEECC----------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGE---IQK--MAGTVKISG---------- 695 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~---~~~--~~G~i~~~g---------- 695 (1513)
.++++|+++.|+. +++|+|+||++++|++++|+|+||||||||+++|.|+ +++ ++|+|.++|
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 5889999999963 4699999999999999999999999999999999996 454 589998876
Q ss_pred -----eEEEEcCCCcccCccHHHHHccCCCC----Cch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHH
Q 000432 696 -----TKAYVPQSPWILTGNIRENILFGNQY----DSC----KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQK 762 (1513)
Q Consensus 696 -----~~ayv~Q~~~l~~~ti~eNI~fg~~~----~~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQk 762 (1513)
.++|+||++.+++.|++||+.++... +++ +.+++++.+++.+++ .+.....+.+||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEV-------KDKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcch-------hhhhhCCcccCCHHHH
Confidence 26999999999989999999876321 111 222333333332222 1234567789999999
Q ss_pred HHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHH
Q 000432 763 QRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEE 841 (1513)
Q Consensus 763 qRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~ 841 (1513)
||++||||++.+|+++||||||++||+.+.+.+. +.++.+.+++|+|+|||+++.+. .||+|++|++|++++.|++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~-~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~ 231 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVE-ELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKK 231 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHH-HHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHH
Confidence 9999999999999999999999999999987775 56666666899999999999875 499999999999999999999
Q ss_pred HHhc
Q 000432 842 LLKQ 845 (1513)
Q Consensus 842 l~~~ 845 (1513)
+.+.
T Consensus 232 ~~~~ 235 (250)
T PRK14245 232 IFTN 235 (250)
T ss_pred HhcC
Confidence 8753
No 448
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-35 Score=335.87 Aligned_cols=204 Identities=27% Similarity=0.430 Sum_probs=167.4
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCcc-----CCCcEEEECCe---------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQ-----KMAGTVKISGT--------- 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~-----~~~G~i~~~g~--------- 696 (1513)
.++++|++|+|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++ |.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4889999999963 479999999999999999999999999999999999997 47999998773
Q ss_pred ------EEEEcCCCcccCccHHHHHccCCCC----Cch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHH
Q 000432 697 ------KAYVPQSPWILTGNIRENILFGNQY----DSC----KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQK 762 (1513)
Q Consensus 697 ------~ayv~Q~~~l~~~ti~eNI~fg~~~----~~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQk 762 (1513)
++|++|++.+++.|++||+.++... +++ +.+++++.+++..+. .........+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET-------KDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch-------HHHhccChhhCCHHHH
Confidence 5899999999999999999876421 111 122233333332111 1123456789999999
Q ss_pred HHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000432 763 QRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEE 841 (1513)
Q Consensus 763 qRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~ 841 (1513)
||++||||++++|+++||||||++||+.+.+.+. +.+..+.+++|+|+|||+++.+.. ||+|++|++|++++.|+.++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~-~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIE-ETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEE 232 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHH-HHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999977775 466666567899999999998765 99999999999999999998
Q ss_pred HHhc
Q 000432 842 LLKQ 845 (1513)
Q Consensus 842 l~~~ 845 (1513)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14251 233 MFIA 236 (251)
T ss_pred HHhC
Confidence 8643
No 449
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-34 Score=335.82 Aligned_cols=206 Identities=24% Similarity=0.397 Sum_probs=168.9
Q ss_pred cceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCcc-----CCCcEEEECCe-------
Q 000432 629 EFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQ-----KMAGTVKISGT------- 696 (1513)
Q Consensus 629 ~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~-----~~~G~i~~~g~------- 696 (1513)
+..++++|++++|+. +++|+|+||+|++|++++|+|+||||||||+++|+|.++ |++|+|.++|.
T Consensus 11 ~~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~ 87 (269)
T PRK14259 11 NIIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRV 87 (269)
T ss_pred CceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccC
Confidence 346999999999963 469999999999999999999999999999999999987 58999998762
Q ss_pred --------EEEEcCCCcccCccHHHHHccCCCCC---c---hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHH
Q 000432 697 --------KAYVPQSPWILTGNIRENILFGNQYD---S---CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQK 762 (1513)
Q Consensus 697 --------~ayv~Q~~~l~~~ti~eNI~fg~~~~---~---~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQk 762 (1513)
++||+|++.++..|++||+.++.... . ++.+++++.+++.. +..+.......+||||||
T Consensus 88 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~ 160 (269)
T PRK14259 88 DPVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWD-------ECKDKLNESGYSLSGGQQ 160 (269)
T ss_pred CHHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcc-------hhhhhhCCCcccCCHHHH
Confidence 69999999999889999999875321 1 11222233333221 112234556778999999
Q ss_pred HHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeC-----------
Q 000432 763 QRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLP-AADIILVMEN----------- 830 (1513)
Q Consensus 763 qRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~-~~d~i~vl~~----------- 830 (1513)
||++||||++++|+++||||||++||+.+.+.+. +.++.+.+++|+|++||+++.+. .||+|++|++
T Consensus 161 qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~-~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~ 239 (269)
T PRK14259 161 QRLCIARTIAIEPEVILMDEPCSALDPISTLKIE-ETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKV 239 (269)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEecccccccccccc
Confidence 9999999999999999999999999999988775 46666656789999999999875 4999999996
Q ss_pred CeEEEecChHHHHhc
Q 000432 831 GRIAQAGRFEELLKQ 845 (1513)
Q Consensus 831 G~i~~~g~~~~l~~~ 845 (1513)
|++++.|+.+++.+.
T Consensus 240 g~~~~~~~~~~~~~~ 254 (269)
T PRK14259 240 GYLVEFNETKKIFNS 254 (269)
T ss_pred ceEEEeCCHHHHHhC
Confidence 678999999998754
No 450
>TIGR02324 CP_lyasePhnL phosphonate C-P lyase system protein PhnL. Members of this family are the PhnL protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated C-P lysase complex. This protein (PhnL) and the adjacent-encoded PhnK (TIGR02323) resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this C-P lyase complex rather than part of a transporter per se.
Probab=100.00 E-value=8.2e-35 Score=328.08 Aligned_cols=198 Identities=23% Similarity=0.338 Sum_probs=165.2
Q ss_pred EEEEEEEEEEcC----C-CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEc--C--eeCCCCCh
Q 000432 1262 ISFHNLQIRYAE----H-LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIID--N--VDITKIGL 1332 (1513)
Q Consensus 1262 I~f~nvsf~Y~~----~-~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~ID--G--vdI~~i~l 1332 (1513)
|+++|++++|+. + ..++|+|+||+|++||.+||+|++|||||||+++|+|+++|++|+|.+| | +++..++.
T Consensus 2 l~~~~l~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~~~g~~~~~~~~~~ 81 (224)
T TIGR02324 2 LEVEDLSKTFTLHQQGGVRLPVLKNVSLTVNAGECVALSGPSGAGKSTLLKSLYANYLPDSGRILVRHEGAWVDLAQASP 81 (224)
T ss_pred EEEEeeEEEeecccCCCcceEEEecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEEecCCCccchhhcCH
Confidence 789999999963 1 2469999999999999999999999999999999999999999999998 4 37776665
Q ss_pred HH---h-hhceEEEcCCCccccC-cHhhccCCC---CCCC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCC
Q 000432 1333 HD---L-RSRLGIIPQDPTLFDG-TVRGNLDPL---VQYS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWS 1400 (1513)
Q Consensus 1333 ~~---L-R~~isiVpQdp~LF~g-TIR~NLdp~---~~~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLS 1400 (1513)
.. + +++++|+||+|.+|.. |+++|+... ...+ ++++.++++..++.+... + ..+.+||
T Consensus 82 ~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~------~----~~~~~LS 151 (224)
T TIGR02324 82 REVLEVRRKTIGYVSQFLRVIPRVSALEVVAEPLLERGVPREAARARARELLARLNIPERLW------H----LPPATFS 151 (224)
T ss_pred HHHHHHHhcceEEEecccccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhh------h----CCcccCC
Confidence 54 3 4579999999998865 999998531 1122 345677777777754321 1 2356799
Q ss_pred hhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHh-hcCEEEEE
Q 000432 1401 VGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVI-DSDLVLVL 1469 (1513)
Q Consensus 1401 gGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~-~~DrIlVL 1469 (1513)
||||||++||||++++|++|+|||||++||+++.+.+.+.|++.. +++|+|+|+|+++.+. -||+|+.+
T Consensus 152 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vsH~~~~~~~~~d~i~~~ 222 (224)
T TIGR02324 152 GGEQQRVNIARGFIADYPILLLDEPTASLDAANRQVVVELIAEAKARGAALIGIFHDEEVRELVADRVMDV 222 (224)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceeEec
Confidence 999999999999999999999999999999999999999998864 4789999999999886 49999876
No 451
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=336.28 Aligned_cols=203 Identities=26% Similarity=0.455 Sum_probs=167.6
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------- 696 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------- 696 (1513)
..++++|++++|+.+ ++++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 6 ~~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~ 84 (271)
T PRK13632 6 VMIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKK 84 (271)
T ss_pred eEEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcc
Confidence 368999999999632 357999999999999999999999999999999999999999999999872
Q ss_pred EEEEcCCC--cccCccHHHHHccCCC---CCchHH----HHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHH
Q 000432 697 KAYVPQSP--WILTGNIRENILFGNQ---YDSCKY----DRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQI 767 (1513)
Q Consensus 697 ~ayv~Q~~--~l~~~ti~eNI~fg~~---~~~~~~----~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~l 767 (1513)
++||+|+| .+++.|++|||.++.. ++.+.. .++++..++.+. ......+||||||||++|
T Consensus 85 i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrl~l 153 (271)
T PRK13632 85 IGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDY-----------LDKEPQNLSGGQKQRVAI 153 (271)
T ss_pred eEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------hhCCcccCCHHHHHHHHH
Confidence 59999998 4557899999998632 222222 223333333322 334557999999999999
Q ss_pred HHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-C-CcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000432 768 ARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-K-DKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 768 ARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~-~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
|||++++|+++||||||++||+.+.+.+++ .+..+. + ++|+|++||+++.+..||+|++|++|++++.|+.+++.+.
T Consensus 154 aral~~~p~lllLDEP~~gLD~~~~~~l~~-~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 154 ASVLALNPEIIIFDESTSMLDPKGKREIKK-IMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999887764 565543 3 4899999999998888999999999999999998887653
No 452
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5e-35 Score=326.70 Aligned_cols=190 Identities=24% Similarity=0.409 Sum_probs=157.5
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC------------eEEE
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG------------TKAY 699 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g------------~~ay 699 (1513)
|+++|++|.|+. +++++|+||++++| +++|+|+||||||||+++|.|+++|++|+|.++| .++|
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~i~~ 76 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQPQKLRRRIGY 76 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccchHHHHhheEE
Confidence 468999999963 47999999999999 9999999999999999999999999999999987 2699
Q ss_pred EcCCCcccCc-cHHHHHccCCC---CCc----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHH
Q 000432 700 VPQSPWILTG-NIRENILFGNQ---YDS----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAV 771 (1513)
Q Consensus 700 v~Q~~~l~~~-ti~eNI~fg~~---~~~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal 771 (1513)
++|++.++.. |++||+.+... .++ ++.++.++.+++.+.. .....+||||||||++||||+
T Consensus 77 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~la~al 145 (211)
T cd03264 77 LPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRA-----------KKKIGSLSGGMRRRVGIAQAL 145 (211)
T ss_pred ecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHH-----------hCchhhCCHHHHHHHHHHHHH
Confidence 9999999875 99999987421 111 1223334444443222 224467999999999999999
Q ss_pred hcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEec
Q 000432 772 YQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAG 837 (1513)
Q Consensus 772 ~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g 837 (1513)
+++|+++||||||++||+.+.+.+. +.++...+++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 146 ~~~p~llllDEPt~~LD~~~~~~l~-~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 146 VGDPSILIVDEPTAGLDPEERIRFR-NLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHH-HHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 9999999999999999999988776 466666567999999999999864 9999999999998765
No 453
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=337.08 Aligned_cols=203 Identities=29% Similarity=0.437 Sum_probs=168.3
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------E
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------K 697 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~ 697 (1513)
.++++|++++|+.....++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 488999999997433346999999999999999999999999999999999999999999999873 5
Q ss_pred EEEcCCCc--ccCccHHHHHccCCC---CCchH----HHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHH
Q 000432 698 AYVPQSPW--ILTGNIRENILFGNQ---YDSCK----YDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIA 768 (1513)
Q Consensus 698 ayv~Q~~~--l~~~ti~eNI~fg~~---~~~~~----~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lA 768 (1513)
+|++|+|. ++..|+.|||.++.. ...+. .+++++.+++.+. .......||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDF-----------KTREPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhH-----------hhCCcccCCHHHHHHHHHH
Confidence 99999983 667899999987632 12221 2333333333221 2234568999999999999
Q ss_pred HHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000432 769 RAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILK--DKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 769 Ral~~~~~illLDep~salD~~~~~~i~~~~~~~~~~--~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
||++.+|+++||||||++||+.+.+.+.+ .+..+.+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMR-VIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999887764 5655543 7999999999999888999999999999999999998754
No 454
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=1.4e-34 Score=370.05 Aligned_cols=199 Identities=25% Similarity=0.351 Sum_probs=170.9
Q ss_pred CcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCC--CcEEEEcCeeCCCCChHHhhhceEEEcCCCcccc-Cc
Q 000432 1276 PSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPT--MGSIIIDNVDITKIGLHDLRSRLGIIPQDPTLFD-GT 1352 (1513)
Q Consensus 1276 ~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~--~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~LF~-gT 1352 (1513)
..+|+|+|+++++||++||+||||||||||+++|.|+.+|. +|+|.+||.++. ...+++++||||++.+|. .|
T Consensus 81 ~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLaG~~~~~~~sG~I~inG~~~~----~~~~~~i~yv~Q~~~l~~~lT 156 (659)
T PLN03211 81 RTILNGVTGMASPGEILAVLGPSGSGKSTLLNALAGRIQGNNFTGTILANNRKPT----KQILKRTGFVTQDDILYPHLT 156 (659)
T ss_pred CeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCceeEEEEECCEECc----hhhccceEEECcccccCCcCC
Confidence 35999999999999999999999999999999999999885 899999999874 245678999999999996 59
Q ss_pred HhhccCCC------CCCCHHH----HHHHHHHcCCcHHHHhhhccccchhccC-CCCCChhHHHHHHHHHHHccCCCEEE
Q 000432 1353 VRGNLDPL------VQYSDKQ----VWEALDKCQLGDLVRAKEEKLDSTVAEN-GENWSVGQRQLFCLGRTLLKKSSILV 1421 (1513)
Q Consensus 1353 IR~NLdp~------~~~sdee----i~~aL~~~~l~~~I~~lp~gLdt~V~e~-G~nLSgGQRQrl~LARALLr~~~ILi 1421 (1513)
+||||.+. .+.+++| +.+.++..++. +..||.+|+. ...||||||||++|||||+++|+||+
T Consensus 157 V~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~-------~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLl 229 (659)
T PLN03211 157 VRETLVFCSLLRLPKSLTKQEKILVAESVISELGLT-------KCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLI 229 (659)
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCCh-------hhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEE
Confidence 99999642 1234443 44455555553 3458888754 67899999999999999999999999
Q ss_pred EecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhh-H-hhcCEEEEEeCCEEeEecChhHHHh
Q 000432 1422 LDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHT-V-IDSDLVLVLSDGRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1422 LDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~t-i-~~~DrIlVLd~G~IvE~Gtp~eLl~ 1485 (1513)
|||||++||+.+...+.+.|++.. +++|||+++|+++. + ..||+|++|++|++++.|+++++.+
T Consensus 230 LDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~ 296 (659)
T PLN03211 230 LDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMA 296 (659)
T ss_pred EeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHH
Confidence 999999999999999999999865 58999999999984 5 4599999999999999999999864
No 455
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.8e-35 Score=335.07 Aligned_cols=205 Identities=23% Similarity=0.409 Sum_probs=167.8
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccC-----CCcEEEECCe--------
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQK-----MAGTVKISGT-------- 696 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~-----~~G~i~~~g~-------- 696 (1513)
..++++|+++.|++ +++|+|+||+|++|++++|+|+||||||||+++|.|+++| ++|+|.++|.
T Consensus 11 ~~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 87 (258)
T PRK14268 11 PQIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVD 87 (258)
T ss_pred eeEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccch
Confidence 36999999999963 4799999999999999999999999999999999999975 7999998762
Q ss_pred -------EEEEcCCCcccCccHHHHHccCCC---CCchHH----HHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHH
Q 000432 697 -------KAYVPQSPWILTGNIRENILFGNQ---YDSCKY----DRTVEACALVKDFELFASGDLTEIGERGINMSGGQK 762 (1513)
Q Consensus 697 -------~ayv~Q~~~l~~~ti~eNI~fg~~---~~~~~~----~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQk 762 (1513)
++|++|++.++..|++||+.|+.. .+.+.. +++++.+++..++ .........+||||||
T Consensus 88 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~ 160 (258)
T PRK14268 88 VVELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-------SDRLKSPALSLSGGQQ 160 (258)
T ss_pred HHHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCChhhCCHHHH
Confidence 589999999999999999988632 222221 2222322222111 1233456778999999
Q ss_pred HHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000432 763 QRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEE 841 (1513)
Q Consensus 763 qRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~ 841 (1513)
||++||||++.+|+++||||||++||+.+.+.+. +.++.+.+++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 161 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~-~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 239 (258)
T PRK14268 161 QRLCIARTLAVKPKIILFDEPTSALDPISTARIE-DLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQ 239 (258)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHH-HHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999977775 566665568999999999998755 99999999999999999998
Q ss_pred HHhc
Q 000432 842 LLKQ 845 (1513)
Q Consensus 842 l~~~ 845 (1513)
+.+.
T Consensus 240 ~~~~ 243 (258)
T PRK14268 240 IFHN 243 (258)
T ss_pred HhcC
Confidence 8643
No 456
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=8.9e-35 Score=331.24 Aligned_cols=203 Identities=28% Similarity=0.457 Sum_probs=165.3
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC---------------e
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG---------------T 696 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g---------------~ 696 (1513)
++++|++++|++ +++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++| .
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 678999999963 4799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEcCCCcccC-ccHHHHHccCCC----CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHH
Q 000432 697 KAYVPQSPWILT-GNIRENILFGNQ----YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAV 771 (1513)
Q Consensus 697 ~ayv~Q~~~l~~-~ti~eNI~fg~~----~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal 771 (1513)
++|++|++.++. .|++||+.++.. .+.+..++.+. +-++.+ |.......+...||||||||++||||+
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~-----~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al 151 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEKQAR-----ELLAKV--GLAERAHHYPSELSGGQQQRVAIARAL 151 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHHHH-----HHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHH
Confidence 699999998885 599999988631 12221111111 111111 222334455678999999999999999
Q ss_pred hcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000432 772 YQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 772 ~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
+.+|++++|||||++||+++.+.+.+ .+..+. +++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~-~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 152 AVKPKLMLFDEPTSALDPELRHEVLK-VMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 99999999999999999999877764 565543 48999999999999865 999999999999999999888653
No 457
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.2e-34 Score=322.46 Aligned_cols=194 Identities=23% Similarity=0.300 Sum_probs=167.9
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceE
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLG 1340 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~is 1340 (1513)
-|+++||+++|++ ..+|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++.. . ..|++++
T Consensus 2 ~l~~~~l~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~--~-~~~~~~~ 76 (207)
T PRK13539 2 MLEGEDLACVRGG--RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLPPAAGTIKLDGGDIDD--P-DVAEACH 76 (207)
T ss_pred EEEEEeEEEEECC--eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeCcc--h-hhHhhcE
Confidence 3789999999964 359999999999999999999999999999999999999999999999998753 2 2888999
Q ss_pred EEcCCCccc-cCcHhhccCCC---CCCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccC
Q 000432 1341 IIPQDPTLF-DGTVRGNLDPL---VQYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKK 1416 (1513)
Q Consensus 1341 iVpQdp~LF-~gTIR~NLdp~---~~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~ 1416 (1513)
++||++.++ ..|+++|+... ....++++.++++..++.+.... + ..+||||||||++||||++++
T Consensus 77 ~~~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-------~----~~~LS~G~~qrl~la~al~~~ 145 (207)
T PRK13539 77 YLGHRNAMKPALTVAENLEFWAAFLGGEELDIAAALEAVGLAPLAHL-------P----FGYLSAGQKRRVALARLLVSN 145 (207)
T ss_pred EecCCCcCCCCCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHcC-------C----hhhcCHHHHHHHHHHHHHhcC
Confidence 999988775 67999998642 12346678899999998654322 2 236999999999999999999
Q ss_pred CCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEEeC
Q 000432 1417 SSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVIDSDLVLVLSD 1471 (1513)
Q Consensus 1417 ~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~~DrIlVLd~ 1471 (1513)
|++|+|||||++||..+.+.+.+.|++.. +++|+|+++|+++.+.. |+++-++.
T Consensus 146 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~-~~~~~~~~ 200 (207)
T PRK13539 146 RPIWILDEPTAALDAAAVALFAELIRAHLAQGGIVIAATHIPLGLPG-ARELDLGP 200 (207)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCchhhcc-CcEEeecC
Confidence 99999999999999999999999998753 57899999999999988 99988754
No 458
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=332.69 Aligned_cols=203 Identities=25% Similarity=0.418 Sum_probs=167.0
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccC-----CCcEEEECC----------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQK-----MAGTVKISG---------- 695 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~-----~~G~i~~~g---------- 695 (1513)
.++++|+++.|+. +++++|+||+|++||+++|+|+||||||||+++|+|.+++ ++|+|.++|
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14240 3 KISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDV 79 (250)
T ss_pred eEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccch
Confidence 5889999999963 4799999999999999999999999999999999998763 689999886
Q ss_pred -----eEEEEcCCCcccCccHHHHHccCCCC----CchHH----HHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHH
Q 000432 696 -----TKAYVPQSPWILTGNIRENILFGNQY----DSCKY----DRTVEACALVKDFELFASGDLTEIGERGINMSGGQK 762 (1513)
Q Consensus 696 -----~~ayv~Q~~~l~~~ti~eNI~fg~~~----~~~~~----~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQk 762 (1513)
.++||+|++.+++.|++||+.++... +.+.. ++.++.+++.+++. ........+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~~ 152 (250)
T PRK14240 80 NQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVK-------DRLKKSALGLSGGQQ 152 (250)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhH-------HHHhcCCCCCCHHHH
Confidence 26999999999989999999986421 11111 22233333322221 234556779999999
Q ss_pred HHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000432 763 QRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEE 841 (1513)
Q Consensus 763 qRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~ 841 (1513)
||++||||++++|+++||||||++||+.+.+.+. +++..+.+++|+|+|||+++.+.. ||+|++|++|++++.|+.++
T Consensus 153 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~-~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 153 QRLCIARALAVEPEVLLMDEPTSALDPISTLKIE-ELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHH-HHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999977775 567666668999999999998765 99999999999999999988
Q ss_pred HHh
Q 000432 842 LLK 844 (1513)
Q Consensus 842 l~~ 844 (1513)
+..
T Consensus 232 ~~~ 234 (250)
T PRK14240 232 LFT 234 (250)
T ss_pred HHh
Confidence 764
No 459
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-35 Score=365.25 Aligned_cols=208 Identities=20% Similarity=0.293 Sum_probs=175.8
Q ss_pred EEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChH-HhhhceEEE
Q 000432 1264 FHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLH-DLRSRLGII 1342 (1513)
Q Consensus 1264 f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~-~LR~~isiV 1342 (1513)
++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+.. .+|+++++|
T Consensus 1 ~~nl~~~~~~--~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v 78 (491)
T PRK10982 1 MSNISKSFPG--VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMV 78 (491)
T ss_pred CCceEEEeCC--EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEE
Confidence 3689999964 3599999999999999999999999999999999999999999999999999876543 457889999
Q ss_pred cCCCcccc-CcHhhccCCCC----C--CCHH----HHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHH
Q 000432 1343 PQDPTLFD-GTVRGNLDPLV----Q--YSDK----QVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGR 1411 (1513)
Q Consensus 1343 pQdp~LF~-gTIR~NLdp~~----~--~sde----ei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LAR 1411 (1513)
||++.+|. .|+++|+.... . .+.+ ++.++++..++.+ .......+||||||||++|||
T Consensus 79 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGq~qrv~lA~ 147 (491)
T PRK10982 79 HQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDI-----------DPRAKVATLSVSQMQMIEIAK 147 (491)
T ss_pred ecccccccCCCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCC-----------CccCchhhCCHHHHHHHHHHH
Confidence 99998775 59999997421 1 1222 3455566555532 222334679999999999999
Q ss_pred HHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1412 TLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1412 ALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
||+++|+||||||||++||+++.+.+.+.|++.. +++|+|+|+|+++.+.. ||+|++|++|++++.|+++++.
T Consensus 148 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 222 (491)
T PRK10982 148 AFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLT 222 (491)
T ss_pred HHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCC
Confidence 9999999999999999999999999999998764 47899999999999876 9999999999999999998864
No 460
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=9.6e-35 Score=326.85 Aligned_cols=191 Identities=28% Similarity=0.410 Sum_probs=156.2
Q ss_pred EEEEeEEEEeCCCC-CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC---------------
Q 000432 632 VEVVNGKFSWNPES-SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG--------------- 695 (1513)
Q Consensus 632 I~~~~~sf~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g--------------- 695 (1513)
++++|++++|++.. ..++|+|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 67899999996422 24699999999999999999999999999999999999999999999876
Q ss_pred --eEEEEcCCCcccC-ccHHHHHccCCC---CCchH----HHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHH
Q 000432 696 --TKAYVPQSPWILT-GNIRENILFGNQ---YDSCK----YDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRI 765 (1513)
Q Consensus 696 --~~ayv~Q~~~l~~-~ti~eNI~fg~~---~~~~~----~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi 765 (1513)
.++|++|++.++. .|++||+.++.. ++... ..+.++.+++ ..........||||||||+
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrv 150 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGL-----------EHRINHRPSELSGGERQRV 150 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCC-----------hhhhhCChhhCCHHHHHHH
Confidence 2799999998885 599999987432 22211 1222222222 2233445578999999999
Q ss_pred HHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccccCCEEEEEeCCeEE
Q 000432 766 QIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPAADIILVMENGRIA 834 (1513)
Q Consensus 766 ~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~~d~i~vl~~G~i~ 834 (1513)
+||||++.+|+++||||||++||+++.+.+. +.+..+. .++|+|++||+++.+..+|+|++|++|+++
T Consensus 151 ~laral~~~p~illlDEPt~~LD~~~~~~l~-~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 151 AIARALVNQPSLVLADEPTGNLDNNNAKIIF-DLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHHHHHhCCCCEEEEeCCCCcCCHHHHHHHH-HHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 9999999999999999999999999987776 4565553 378999999999998889999999999985
No 461
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=332.14 Aligned_cols=204 Identities=24% Similarity=0.394 Sum_probs=167.9
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCC-----CcEEEECC----------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKM-----AGTVKISG---------- 695 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~-----~G~i~~~g---------- 695 (1513)
.++++|++|.|+. +++|+|+||+|++|++++|+|+||||||||+++|+|+++|. +|+|.++|
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 5889999999963 46999999999999999999999999999999999999987 69998865
Q ss_pred -----eEEEEcCCCcccCccHHHHHccCCCC---C-chHHHHH----HHHHhcHHHHhhccCCCCccccCCCCCCChHHH
Q 000432 696 -----TKAYVPQSPWILTGNIRENILFGNQY---D-SCKYDRT----VEACALVKDFELFASGDLTEIGERGINMSGGQK 762 (1513)
Q Consensus 696 -----~~ayv~Q~~~l~~~ti~eNI~fg~~~---~-~~~~~~v----~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQk 762 (1513)
.++||+|++.+++.|++||+.++..+ . +++.++. ++..++. ++..+.....+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~l~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALW-------DEVKDNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCc-------hhhhhHhhCCcccCCHHHH
Confidence 26999999999999999999986432 1 1112222 2222221 1112335667889999999
Q ss_pred HHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000432 763 QRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEE 841 (1513)
Q Consensus 763 qRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~ 841 (1513)
||++||||++++|+++||||||++||+.+.+.+. +++..+.+++|+|+|||+++.+.. ||+|++|++|++++.|+.++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~-~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 232 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIE-ELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGE 232 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHH
Confidence 9999999999999999999999999999977765 466665568999999999999765 89999999999999999988
Q ss_pred HHhc
Q 000432 842 LLKQ 845 (1513)
Q Consensus 842 l~~~ 845 (1513)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14249 233 IFSR 236 (251)
T ss_pred HHhC
Confidence 8643
No 462
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-34 Score=335.53 Aligned_cols=205 Identities=22% Similarity=0.356 Sum_probs=167.1
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCcc-----CCCcEEEECC---------
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQ-----KMAGTVKISG--------- 695 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~-----~~~G~i~~~g--------- 695 (1513)
..++++|++++|+. +++|+|+||+|++|++++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 20 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 96 (268)
T PRK14248 20 HILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNIN 96 (268)
T ss_pred ceEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEccccccc
Confidence 46899999999963 579999999999999999999999999999999999864 6899998876
Q ss_pred ------eEEEEcCCCcccCccHHHHHccCCCCCc----hHH----HHHHHHHhcHHHHhhccCCCCccccCCCCCCChHH
Q 000432 696 ------TKAYVPQSPWILTGNIRENILFGNQYDS----CKY----DRTVEACALVKDFELFASGDLTEIGERGINMSGGQ 761 (1513)
Q Consensus 696 ------~~ayv~Q~~~l~~~ti~eNI~fg~~~~~----~~~----~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQ 761 (1513)
.++|++|+++++++|++||+.++..... ... .+.++.+++.. +..........+|||||
T Consensus 97 ~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LSgGq 169 (268)
T PRK14248 97 VVNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWD-------EVKDRLHSSALSLSGGQ 169 (268)
T ss_pred HHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCc-------chHHHHhcCcccCCHHH
Confidence 2689999999999999999997632211 111 11222222211 11123456678999999
Q ss_pred HHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChH
Q 000432 762 KQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFE 840 (1513)
Q Consensus 762 kqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~ 840 (1513)
|||++||||++++|+++||||||++||+.+.+.+. +.+..+.+++|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 170 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~-~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~ 248 (268)
T PRK14248 170 QQRLCIARTLAMKPAVLLLDEPASALDPISNAKIE-ELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTE 248 (268)
T ss_pred HHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHH-HHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999977775 56666656789999999999875 59999999999999999998
Q ss_pred HHHhc
Q 000432 841 ELLKQ 845 (1513)
Q Consensus 841 ~l~~~ 845 (1513)
++...
T Consensus 249 ~~~~~ 253 (268)
T PRK14248 249 QIFTS 253 (268)
T ss_pred HHHhC
Confidence 88654
No 463
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1e-34 Score=341.35 Aligned_cols=201 Identities=26% Similarity=0.436 Sum_probs=164.5
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe------------E
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------K 697 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------~ 697 (1513)
..|+++|++++|+. .++|+|+||+|++|++++|+||||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~i 79 (303)
T TIGR01288 3 VAIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSRARLARVAI 79 (303)
T ss_pred cEEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcccHHHHhhcE
Confidence 35899999999963 46999999999999999999999999999999999999999999999873 6
Q ss_pred EEEcCCCcccC-ccHHHHHcc-CCC--CCchHH----HHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHH
Q 000432 698 AYVPQSPWILT-GNIRENILF-GNQ--YDSCKY----DRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIAR 769 (1513)
Q Consensus 698 ayv~Q~~~l~~-~ti~eNI~f-g~~--~~~~~~----~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lAR 769 (1513)
+|+||++.++. .|++||+.+ +.. .+.... ++.++.++ +++. ...+..+||||||||++|||
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~-------l~~~----~~~~~~~LSgG~~qrv~la~ 148 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFAR-------LESK----ADVRVALLSGGMKRRLTLAR 148 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCC-------ChhH----hcCchhhCCHHHHHHHHHHH
Confidence 99999998885 699999975 221 222211 12222222 2222 22344679999999999999
Q ss_pred HHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhh-cCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000432 770 AVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGI-LKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 770 al~~~~~illLDep~salD~~~~~~i~~~~~~~~-~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
|++++|+++||||||++||+.+.+.+.+ .+..+ .+|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 149 al~~~p~lllLDEPt~gLD~~~~~~l~~-~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 149 ALINDPQLLILDEPTTGLDPHARHLIWE-RLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHH-HHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999999887764 55554 358999999999999865 999999999999999999998643
No 464
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=336.31 Aligned_cols=203 Identities=24% Similarity=0.401 Sum_probs=169.3
Q ss_pred eEEEEeEEEEeCCCC---CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-----------
Q 000432 631 EVEVVNGKFSWNPES---SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT----------- 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~---~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~----------- 696 (1513)
-++++|++++|+... .+++|+|+||+|++||+++|+|+||||||||+++|.|.++|++|+|.++|.
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 488999999996421 257999999999999999999999999999999999999999999999872
Q ss_pred ---EEEEcCCCc--ccCccHHHHHccCCC---CCc----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHH
Q 000432 697 ---KAYVPQSPW--ILTGNIRENILFGNQ---YDS----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQR 764 (1513)
Q Consensus 697 ---~ayv~Q~~~--l~~~ti~eNI~fg~~---~~~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqR 764 (1513)
++||+|+|. ++..|+.||+.|+.. .+. ++.+++++.+++.+.. .....+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~-----------~~~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYR-----------RHAPHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHh-----------hCCcccCCHHHHHH
Confidence 589999984 667799999998732 122 2234444444544332 23446899999999
Q ss_pred HHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHH
Q 000432 765 IQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEEL 842 (1513)
Q Consensus 765 i~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l 842 (1513)
++||||++.+|+++||||||++||+.+.+.+. +++..+. .++|+|+|||+++.+..||++++|++|++++.|+++++
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~-~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 231 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVV-NTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEI 231 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHH-HHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHH
Confidence 99999999999999999999999999988776 4666553 38999999999999878999999999999999999998
Q ss_pred Hhc
Q 000432 843 LKQ 845 (1513)
Q Consensus 843 ~~~ 845 (1513)
...
T Consensus 232 ~~~ 234 (280)
T PRK13633 232 FKE 234 (280)
T ss_pred hcC
Confidence 754
No 465
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-34 Score=334.18 Aligned_cols=204 Identities=23% Similarity=0.417 Sum_probs=169.8
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCcc-----CCCcEEEECC----------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQ-----KMAGTVKISG---------- 695 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~-----~~~G~i~~~g---------- 695 (1513)
.++++|++++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 5899999999963 479999999999999999999999999999999999976 3799999877
Q ss_pred -----eEEEEcCCCcccCccHHHHHccCCCCC------chHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHH
Q 000432 696 -----TKAYVPQSPWILTGNIRENILFGNQYD------SCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQR 764 (1513)
Q Consensus 696 -----~~ayv~Q~~~l~~~ti~eNI~fg~~~~------~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqR 764 (1513)
.++|++|++.+++.|++|||.++.... +++.+++++.+++..++. ......+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVK-------DKLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHH-------HHhcCCcccCCHHHHHH
Confidence 269999999999889999999864321 112233344444443332 12355677999999999
Q ss_pred HHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEe---------CCeEE
Q 000432 765 IQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVME---------NGRIA 834 (1513)
Q Consensus 765 i~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~---------~G~i~ 834 (1513)
++||||++++|+++||||||++||+++.+.+. +.+..+.+++|+|++||+++.+.. ||+|++|+ +|+++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~-~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~ 238 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIE-ELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLV 238 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHH-HHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 99999999999999999999999999987765 566666667899999999998765 99999998 89999
Q ss_pred EecChHHHHhc
Q 000432 835 QAGRFEELLKQ 845 (1513)
Q Consensus 835 ~~g~~~~l~~~ 845 (1513)
+.|+.+|+.+.
T Consensus 239 ~~~~~~~~~~~ 249 (264)
T PRK14243 239 EFDRTEKIFNS 249 (264)
T ss_pred EeCCHHHHHhC
Confidence 99999998754
No 466
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=1.2e-34 Score=310.78 Aligned_cols=162 Identities=25% Similarity=0.445 Sum_probs=146.6
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC--eEEEEcCCCcccCc
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG--TKAYVPQSPWILTG 709 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g--~~ayv~Q~~~l~~~ 709 (1513)
|+++|++++|+.+ +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++| .++|++|++++++.
T Consensus 1 i~~~~~~~~~~~~--~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~i~~~~q~~~~~~~ 78 (166)
T cd03223 1 IELENLSLATPDG--RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEGEDLLFLPQRPYLPLG 78 (166)
T ss_pred CEEEEEEEEcCCC--CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCCceEEEECCCCccccc
Confidence 4689999999632 4799999999999999999999999999999999999999999999987 78999999999999
Q ss_pred cHHHHHccCCCCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCH
Q 000432 710 NIRENILFGNQYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLLDDPFSAVDA 789 (1513)
Q Consensus 710 ti~eNI~fg~~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~illLDep~salD~ 789 (1513)
|++||+.++ ....||||||||++||||++++|+++||||||++||+
T Consensus 79 tv~~nl~~~----------------------------------~~~~LS~G~~~rv~laral~~~p~~lllDEPt~~LD~ 124 (166)
T cd03223 79 TLREQLIYP----------------------------------WDDVLSGGEQQRLAFARLLLHKPKFVFLDEATSALDE 124 (166)
T ss_pred cHHHHhhcc----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCEEEEECCccccCH
Confidence 999999874 2468999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcCCcEEEEEccCCCccccCCEEEEEeCCe
Q 000432 790 HTGTQLFKDCLMGILKDKSVLYVTHQVEFLPAADIILVMENGR 832 (1513)
Q Consensus 790 ~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~~d~i~vl~~G~ 832 (1513)
++.+.+.+ .+... ++|+|++||+.+....||+|++|++|.
T Consensus 125 ~~~~~l~~-~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 125 ESEDRLYQ-LLKEL--GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred HHHHHHHH-HHHHh--CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 99887764 55554 689999999998877899999998763
No 467
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.4e-34 Score=330.16 Aligned_cols=207 Identities=24% Similarity=0.350 Sum_probs=167.4
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------------E
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT--------------K 697 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~--------------~ 697 (1513)
|+++|+++.|+. +++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (242)
T TIGR03411 3 LYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGI 79 (242)
T ss_pred EEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCe
Confidence 789999999963 47999999999999999999999999999999999999999999999872 6
Q ss_pred EEEcCCCcccCc-cHHHHHccCCCCCchHH------HHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHH
Q 000432 698 AYVPQSPWILTG-NIRENILFGNQYDSCKY------DRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARA 770 (1513)
Q Consensus 698 ayv~Q~~~l~~~-ti~eNI~fg~~~~~~~~------~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARa 770 (1513)
+|++|++.++.+ |++||+.++...+...+ ..........+-++.+ |..........+||||||||++||||
T Consensus 80 ~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lara 157 (242)
T TIGR03411 80 GRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGML 157 (242)
T ss_pred eEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHH
Confidence 899999999986 99999988643211000 0000000111122222 23334456677899999999999999
Q ss_pred HhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000432 771 VYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLK 844 (1513)
Q Consensus 771 l~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~ 844 (1513)
++++|+++||||||++||+++.+.+. +.+..+.+++|+|++||+++.++. ||+|++|++|++++.|+++++..
T Consensus 158 l~~~p~~lllDEPt~~LD~~~~~~l~-~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 158 LMQDPKLLLLDEPVAGMTDEETEKTA-ELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HhcCCCEEEecCCccCCCHHHHHHHH-HHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 99999999999999999999987775 466666667999999999999875 99999999999999999988864
No 468
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=8.7e-35 Score=321.41 Aligned_cols=192 Identities=19% Similarity=0.271 Sum_probs=164.3
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEE
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGI 1341 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isi 1341 (1513)
|+++|++++|+. ..+|+|+||+|++||++||+|++|||||||+++|.|+++|++|+|.+||.++...+ ...|+++++
T Consensus 1 l~~~~l~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~~ 77 (198)
T TIGR01189 1 LAARNLACSRGE--RMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLRPDSGEVRWNGTALAEQR-DEPHRNILY 77 (198)
T ss_pred CEEEEEEEEECC--EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEEcccch-HHhhhheEE
Confidence 578999999964 35999999999999999999999999999999999999999999999999998765 457889999
Q ss_pred EcCCCcccc-CcHhhccCCCC---CCCHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCC
Q 000432 1342 IPQDPTLFD-GTVRGNLDPLV---QYSDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKS 1417 (1513)
Q Consensus 1342 VpQdp~LF~-gTIR~NLdp~~---~~sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~ 1417 (1513)
+||++.+|. .|+++|+.... ...++++.++++..++.+... +. ..+||||||||++||||++++|
T Consensus 78 ~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~----~~~LS~G~~qrv~la~al~~~p 146 (198)
T TIGR01189 78 LGHLPGLKPELSALENLHFWAAIHGGAQRTIEDALAAVGLTGFED-------LP----AAQLSAGQQRRLALARLWLSRA 146 (198)
T ss_pred eccCcccccCCcHHHHHHHHHHHcCCcHHHHHHHHHHcCCHHHhc-------CC----hhhcCHHHHHHHHHHHHHhcCC
Confidence 999999886 69999995321 112446888999999876543 22 2469999999999999999999
Q ss_pred CEEEEecCCCCCCHHHHHHHHHHHHHh-cCCcEEEEeccChhhHhhcCEEEE
Q 000432 1418 SILVLDEATASVDSATDGVIQKIISQE-FKDRTVVTIAHRIHTVIDSDLVLV 1468 (1513)
Q Consensus 1418 ~ILiLDEaTSslD~~Te~~Iq~~i~~~-~~~~TvI~IAHRl~ti~~~DrIlV 1468 (1513)
++|+|||||++||..+.+.+.+.|++. .++.|+|+++|+...+ .||+++.
T Consensus 147 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~-~~~~~~~ 197 (198)
T TIGR01189 147 PLWILDEPTTALDKAGVALLAGLLRAHLARGGIVLLTTHQDLGL-VEARELR 197 (198)
T ss_pred CEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEEcccccc-cceEEee
Confidence 999999999999999999999999875 3578999999997443 4577664
No 469
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=1e-34 Score=334.08 Aligned_cols=204 Identities=25% Similarity=0.428 Sum_probs=166.4
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------- 696 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------- 696 (1513)
..++++|+++.|++ +++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 45899999999963 47999999999999999999999999999999999999999999998872
Q ss_pred -------------EEEEcCCCcccC-ccHHHHHccCC----CCCchH-HHHHHHHHhcHHHHhhccCCCCccc-cCCCCC
Q 000432 697 -------------KAYVPQSPWILT-GNIRENILFGN----QYDSCK-YDRTVEACALVKDFELFASGDLTEI-GERGIN 756 (1513)
Q Consensus 697 -------------~ayv~Q~~~l~~-~ti~eNI~fg~----~~~~~~-~~~v~~~~~l~~d~~~l~~Gd~T~I-ge~g~~ 756 (1513)
++||||++.++. .|++||+.++. ..+... .+++.+. ++.+ |..... .....+
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~------l~~~--gl~~~~~~~~~~~ 152 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKY------LAKV--GIDERAQGKYPVH 152 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHH------HHHc--CCChhhhhCCccc
Confidence 699999999987 49999998742 112111 1111111 1111 111222 455678
Q ss_pred CChHHHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCeEE
Q 000432 757 MSGGQKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPA-ADIILVMENGRIA 834 (1513)
Q Consensus 757 LSGGQkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~ 834 (1513)
||||||||++||||++++|+++||||||++||+.+.+.+.+ .+..+. +++|+|+|||+++.++. ||+|++|++|+++
T Consensus 153 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~-~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~ 231 (257)
T PRK10619 153 LSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLR-IMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIE 231 (257)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEE
Confidence 99999999999999999999999999999999999887764 566554 48999999999999886 9999999999999
Q ss_pred EecChHHHHhc
Q 000432 835 QAGRFEELLKQ 845 (1513)
Q Consensus 835 ~~g~~~~l~~~ 845 (1513)
+.|+++++.+.
T Consensus 232 ~~~~~~~~~~~ 242 (257)
T PRK10619 232 EEGAPEQLFGN 242 (257)
T ss_pred EeCCHHHhhhC
Confidence 99999988643
No 470
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-34 Score=334.98 Aligned_cols=206 Identities=25% Similarity=0.429 Sum_probs=169.4
Q ss_pred cceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccC-----CCcEEEECC--------
Q 000432 629 EFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQK-----MAGTVKISG-------- 695 (1513)
Q Consensus 629 ~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~-----~~G~i~~~g-------- 695 (1513)
...++++|++++|+. +++|+|+||+|++||+++|+|+||||||||+++|+|.+++ ++|+|.++|
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 346999999999953 4799999999999999999999999999999999999874 899999876
Q ss_pred -------eEEEEcCCCcccCccHHHHHccCCCCC----ch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChH
Q 000432 696 -------TKAYVPQSPWILTGNIRENILFGNQYD----SC----KYDRTVEACALVKDFELFASGDLTEIGERGINMSGG 760 (1513)
Q Consensus 696 -------~~ayv~Q~~~l~~~ti~eNI~fg~~~~----~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGG 760 (1513)
.++|++|++.+++.|++||+.++.... ++ +.+++++..++.+++ .+..+.++.+||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEV-------KDRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhH-------HHHhhCCcccCCHH
Confidence 258999999999899999998763211 11 122223333332222 13456778899999
Q ss_pred HHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecCh
Q 000432 761 QKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRF 839 (1513)
Q Consensus 761 QkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~ 839 (1513)
|||||+||||++++|+++||||||++||+.+...+. +.+..+.+++|+|++||+++.+. .||+|++|++|++++.|++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~-~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~ 251 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIE-ELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDT 251 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHH-HHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCH
Confidence 999999999999999999999999999999977665 56666656799999999999875 5999999999999999999
Q ss_pred HHHHhc
Q 000432 840 EELLKQ 845 (1513)
Q Consensus 840 ~~l~~~ 845 (1513)
+++.+.
T Consensus 252 ~~~~~~ 257 (272)
T PRK14236 252 DTLFTS 257 (272)
T ss_pred HHHhcC
Confidence 888643
No 471
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=1.4e-34 Score=363.91 Aligned_cols=211 Identities=22% Similarity=0.306 Sum_probs=178.8
Q ss_pred EEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCC--CCcEEEEcCeeCCCCChHH-hhhc
Q 000432 1262 ISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEP--TMGSIIIDNVDITKIGLHD-LRSR 1338 (1513)
Q Consensus 1262 I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep--~~G~I~IDGvdI~~i~l~~-LR~~ 1338 (1513)
|+++|++++|++ .++|+|+||++++||++||+|+||||||||+++|.|+++| ++|+|.+||.++...+... .|++
T Consensus 2 l~i~~l~~~~~~--~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (500)
T TIGR02633 2 LEMKGIVKTFGG--VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAG 79 (500)
T ss_pred EEEEeEEEEeCC--eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCC
Confidence 789999999964 3599999999999999999999999999999999999987 7999999999998877655 4678
Q ss_pred eEEEcCCCccccC-cHhhccCCCCC-------CC----HHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHH
Q 000432 1339 LGIIPQDPTLFDG-TVRGNLDPLVQ-------YS----DKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQL 1406 (1513)
Q Consensus 1339 isiVpQdp~LF~g-TIR~NLdp~~~-------~s----deei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQr 1406 (1513)
++||||+|.+|.. |+++|+..... .+ ++++.++++..++.+.. .+.++ .+||||||||
T Consensus 80 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~------~~~~~----~~LSgG~~qr 149 (500)
T TIGR02633 80 IVIIHQELTLVPELSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADN------VTRPV----GDYGGGQQQL 149 (500)
T ss_pred EEEEeeccccCCCCcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCc------ccCch----hhCCHHHHHH
Confidence 9999999988875 99999964211 11 23456677777664311 12223 4699999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeEecChhHHH
Q 000432 1407 FCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1407 l~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
++|||||+++|+||+|||||++||+++.+.+.+.|++.. +++|||+|+|+++.+.. ||+|++|++|++++.|++++..
T Consensus 150 v~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (500)
T TIGR02633 150 VEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMS 229 (500)
T ss_pred HHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCC
Confidence 999999999999999999999999999999999998753 47899999999999976 9999999999999999887653
No 472
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.1e-34 Score=330.30 Aligned_cols=203 Identities=30% Similarity=0.426 Sum_probs=164.6
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC----------------
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG---------------- 695 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g---------------- 695 (1513)
++++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 4 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (250)
T PRK11264 4 IEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLI 80 (250)
T ss_pred EEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHH
Confidence 789999999963 4799999999999999999999999999999999999999999998865
Q ss_pred -----eEEEEcCCCcccC-ccHHHHHccCC----CCCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHH
Q 000432 696 -----TKAYVPQSPWILT-GNIRENILFGN----QYDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRI 765 (1513)
Q Consensus 696 -----~~ayv~Q~~~l~~-~ti~eNI~fg~----~~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi 765 (1513)
.++||+|++.++. .|++||+.++. ..+.+..++.++ +-++.+ |..........+||||||||+
T Consensus 81 ~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~l~~~--gl~~~~~~~~~~LS~Gq~qrv 153 (250)
T PRK11264 81 RQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARAR-----ELLAKV--GLAGKETSYPRRLSGGQQQRV 153 (250)
T ss_pred HHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHH-----HHHHHc--CCcchhhCChhhCChHHHHHH
Confidence 2699999998885 69999998752 111111111111 111221 222223456779999999999
Q ss_pred HHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHH
Q 000432 766 QIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELL 843 (1513)
Q Consensus 766 ~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~ 843 (1513)
+||||+..+|+++||||||++||+.+.+.+.+ ++..+. +++|+|++||+++.+.. ||+|++|++|++++.|+.+++.
T Consensus 154 ~la~al~~~p~lllLDEPt~~LD~~~~~~l~~-~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 154 AIARALAMRPEVILFDEPTSALDPELVGEVLN-TIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHH-HHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 99999999999999999999999999877764 565544 48999999999999865 9999999999999999999886
Q ss_pred hc
Q 000432 844 KQ 845 (1513)
Q Consensus 844 ~~ 845 (1513)
+.
T Consensus 233 ~~ 234 (250)
T PRK11264 233 AD 234 (250)
T ss_pred cC
Confidence 53
No 473
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=7.7e-35 Score=329.67 Aligned_cols=197 Identities=30% Similarity=0.459 Sum_probs=163.1
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC--------------eE
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG--------------TK 697 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g--------------~~ 697 (1513)
++++|+++.|+. +++|+|+||++++||+++|+|+||||||||+++|.|+++|++|+|.++| .+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 468999999963 4799999999999999999999999999999999999999999999987 26
Q ss_pred EEEcCCCcccCc-cHHHHHccCCCCC-ch---HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHh
Q 000432 698 AYVPQSPWILTG-NIRENILFGNQYD-SC---KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVY 772 (1513)
Q Consensus 698 ayv~Q~~~l~~~-ti~eNI~fg~~~~-~~---~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~ 772 (1513)
+|++|++.++.. |++||+.++.... .. .++++++..+ +..........+||||||||++||||++
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 999999998876 9999998764321 11 1222222221 1112234556789999999999999999
Q ss_pred cCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHH
Q 000432 773 QDADIYLLDDPFSAVDAHTGTQLFKDCLMGILK--DKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEEL 842 (1513)
Q Consensus 773 ~~~~illLDep~salD~~~~~~i~~~~~~~~~~--~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l 842 (1513)
++|+++||||||++||+.+.+.+. +.+....+ ++|+|++||+++.+.. ||+|++|++|++++.|+.+++
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~-~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIG-RVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHH-HHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 999999999999999999977775 45655443 7899999999999875 999999999999999999887
No 474
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=6.4e-34 Score=324.79 Aligned_cols=176 Identities=22% Similarity=0.391 Sum_probs=130.6
Q ss_pred EeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHhhhceEEEcCCCc-cccCcHhhccCCCC--
Q 000432 1285 TFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDLRSRLGIIPQDPT-LFDGTVRGNLDPLV-- 1361 (1513)
Q Consensus 1285 ~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~LR~~isiVpQdp~-LF~gTIR~NLdp~~-- 1361 (1513)
+|..||.+||+||+|-||||++++|.|..+|++|+ ..+ -+++|=||--. -|+|||++-|.-..
T Consensus 363 ~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~----------~~vSyKPQyI~~~~~gtV~~~l~~~~~~ 428 (591)
T COG1245 363 EIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EED----------LKVSYKPQYISPDYDGTVEDLLRSAIRS 428 (591)
T ss_pred eeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Ccc----------ceEeecceeecCCCCCcHHHHHHHhhhh
Confidence 45668999999999999999999999999999998 222 25889999432 38999987663110
Q ss_pred CCCHHHHH-HHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHH
Q 000432 1362 QYSDKQVW-EALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKI 1440 (1513)
Q Consensus 1362 ~~sdeei~-~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~ 1440 (1513)
.+.+.-.+ +.++ |-.++-.....-.+||||+.||++||-||.|++++.+||||+|.||.+..-.+-++
T Consensus 429 ~~~~s~~~~ei~~-----------pl~l~~i~e~~v~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~vakv 497 (591)
T COG1245 429 AFGSSYFKTEIVK-----------PLNLEDLLERPVDELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVAKV 497 (591)
T ss_pred hcccchhHHhhcC-----------ccchHHHHhcccccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHHHH
Confidence 01111111 1222 33333333444467999999999999999999999999999999999999999999
Q ss_pred HHHhc--CCcEEEEeccChhhHhh-cCEEEEEeC--CEEeEecChhHHHh
Q 000432 1441 ISQEF--KDRTVVTIAHRIHTVID-SDLVLVLSD--GRIAEYDSPTKLLE 1485 (1513)
Q Consensus 1441 i~~~~--~~~TvI~IAHRl~ti~~-~DrIlVLd~--G~IvE~Gtp~eLl~ 1485 (1513)
||+.. .++|.++|-|++-.+.. +||++|.+. |+=-....|..+.+
T Consensus 498 IRR~~e~~~kta~vVdHDi~~~dyvsDr~ivF~GePg~~g~a~~P~~mr~ 547 (591)
T COG1245 498 IRRFIENNEKTALVVDHDIYMIDYVSDRLIVFEGEPGKHGHASPPMSMRE 547 (591)
T ss_pred HHHHHhhcCceEEEEecceehhhhhhceEEEEecCCCccCcCCCCccHHH
Confidence 98754 57899999999988866 999999963 22222334555543
No 475
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-34 Score=334.98 Aligned_cols=205 Identities=22% Similarity=0.380 Sum_probs=168.6
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCcc-----CCCcEEEECC---------
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQ-----KMAGTVKISG--------- 695 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~-----~~~G~i~~~g--------- 695 (1513)
..++++|+++.|+. +++|+|+||+|++|++++|+|+||||||||+++|.|+++ |++|+|.++|
T Consensus 23 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 99 (271)
T PRK14238 23 VVFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYS 99 (271)
T ss_pred eEEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEccccccc
Confidence 36999999999963 479999999999999999999999999999999999987 6999999887
Q ss_pred ------eEEEEcCCCcccCccHHHHHccCCCC---Cch-HHH----HHHHHHhcHHHHhhccCCCCccccCCCCCCChHH
Q 000432 696 ------TKAYVPQSPWILTGNIRENILFGNQY---DSC-KYD----RTVEACALVKDFELFASGDLTEIGERGINMSGGQ 761 (1513)
Q Consensus 696 ------~~ayv~Q~~~l~~~ti~eNI~fg~~~---~~~-~~~----~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQ 761 (1513)
.++|++|++.++..|++|||.++... +++ ..+ +.++..++..++ .......+.+|||||
T Consensus 100 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l-------~~~~~~~~~~LSgGe 172 (271)
T PRK14238 100 VEELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDEL-------KDRLHDNAYGLSGGQ 172 (271)
T ss_pred HHHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchH-------HHHHhcCcccCCHHH
Confidence 26999999999999999999875321 111 111 111111111112 233456778999999
Q ss_pred HHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChH
Q 000432 762 KQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFE 840 (1513)
Q Consensus 762 kqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~ 840 (1513)
|||++||||++++|+++||||||++||+.+.+.+. +.+..+.+++|+|++||+++++.. ||+|++|++|++++.|+++
T Consensus 173 ~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~-~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~ 251 (271)
T PRK14238 173 QQRLCIARCLAIEPDVILMDEPTSALDPISTLKVE-ELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTD 251 (271)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHH-HHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999987775 466666668999999999999765 9999999999999999999
Q ss_pred HHHhc
Q 000432 841 ELLKQ 845 (1513)
Q Consensus 841 ~l~~~ 845 (1513)
++...
T Consensus 252 ~~~~~ 256 (271)
T PRK14238 252 KIFSN 256 (271)
T ss_pred HHHcC
Confidence 88654
No 476
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-34 Score=333.74 Aligned_cols=201 Identities=24% Similarity=0.332 Sum_probs=165.6
Q ss_pred cceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe------------
Q 000432 629 EFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------ 696 (1513)
Q Consensus 629 ~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------ 696 (1513)
+..++++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 9 ~~~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~ 85 (265)
T PRK10575 9 DTTFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFAR 85 (265)
T ss_pred CceEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhh
Confidence 346999999999963 47999999999999999999999999999999999999999999999882
Q ss_pred -EEEEcCCCcccC-ccHHHHHccCCC-C-------C---chHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHH
Q 000432 697 -KAYVPQSPWILT-GNIRENILFGNQ-Y-------D---SCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQ 763 (1513)
Q Consensus 697 -~ayv~Q~~~l~~-~ti~eNI~fg~~-~-------~---~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkq 763 (1513)
++|++|++-++. .|+.||+.++.. . . .++.++.++.+++.+.+ .....+|||||||
T Consensus 86 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~q 154 (265)
T PRK10575 86 KVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLA-----------HRLVDSLSGGERQ 154 (265)
T ss_pred heEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHh-----------cCCcccCCHHHHH
Confidence 699999986665 499999997631 1 1 11233344444443222 2334579999999
Q ss_pred HHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChH
Q 000432 764 RIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFE 840 (1513)
Q Consensus 764 Ri~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~ 840 (1513)
|++||||+..+|+++||||||++||+.+.+.+. +.+..+. .++|+|++||+++.+. .||+|++|++|++++.|+.+
T Consensus 155 rv~laral~~~p~lllLDEPt~~LD~~~~~~~~-~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~ 233 (265)
T PRK10575 155 RAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVL-ALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPA 233 (265)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHH-HHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHH
Confidence 999999999999999999999999999977765 4565553 3789999999999986 59999999999999999998
Q ss_pred HHHh
Q 000432 841 ELLK 844 (1513)
Q Consensus 841 ~l~~ 844 (1513)
++.+
T Consensus 234 ~~~~ 237 (265)
T PRK10575 234 ELMR 237 (265)
T ss_pred HhcC
Confidence 8764
No 477
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=4.6e-35 Score=296.93 Aligned_cols=217 Identities=29% Similarity=0.441 Sum_probs=188.6
Q ss_pred eEEEEEEEEEEcCCCCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCC----------
Q 000432 1261 TISFHNLQIRYAEHLPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKI---------- 1330 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i---------- 1330 (1513)
.++.+|+..+|.+. .||||||++.++|+.|.|+|.|||||||+++++-=+-.|+.|+|.++|..|...
T Consensus 6 ~l~v~dlHK~~G~~--eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~a 83 (256)
T COG4598 6 ALEVEDLHKRYGEH--EVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKPA 83 (256)
T ss_pred ceehhHHHhhcccc--hhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeeeC
Confidence 68999999999876 499999999999999999999999999999999999999999999999877542
Q ss_pred ---ChHHhhhceEEEcCCCcccc-CcHhhccC--CC---CCCCHH---HHHHHHHHcCCcHHHHhhhccccchhccCCCC
Q 000432 1331 ---GLHDLRSRLGIIPQDPTLFD-GTVRGNLD--PL---VQYSDK---QVWEALDKCQLGDLVRAKEEKLDSTVAENGEN 1398 (1513)
Q Consensus 1331 ---~l~~LR~~isiVpQdp~LF~-gTIR~NLd--p~---~~~sde---ei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~n 1398 (1513)
.++.+|+++++|+|.--|++ .|+-+|.- |. +.-.+| .-..-|.++|+.+-.+.-| ..
T Consensus 84 d~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek~~~YP-----------~~ 152 (256)
T COG4598 84 DKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEKADAYP-----------AH 152 (256)
T ss_pred CHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhhhhcCc-----------cc
Confidence 35678999999999999996 59999983 42 222223 2344577888877554443 46
Q ss_pred CChhHHHHHHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhh-cCEEEEEeCCEEeE
Q 000432 1399 WSVGQRQLFCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVID-SDLVLVLSDGRIAE 1476 (1513)
Q Consensus 1399 LSgGQRQrl~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~-~DrIlVLd~G~IvE 1476 (1513)
|||||+||.+|||||.-+|+++++|||||+||++--..+.+.|++.. .++|.++|||-+...++ +..|+.|++|+|.|
T Consensus 153 LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~iEE 232 (256)
T COG4598 153 LSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKIEE 232 (256)
T ss_pred cCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeecceecc
Confidence 89999999999999999999999999999999999999888888765 58999999999999998 89999999999999
Q ss_pred ecChhHHHhcCChH
Q 000432 1477 YDSPTKLLEREDSF 1490 (1513)
Q Consensus 1477 ~Gtp~eLl~~~~~~ 1490 (1513)
.|+|+++..++.|.
T Consensus 233 ~G~P~qvf~nP~S~ 246 (256)
T COG4598 233 EGPPEQVFGNPQSP 246 (256)
T ss_pred cCChHHHhcCCCCH
Confidence 99999999998763
No 478
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=1.2e-34 Score=348.50 Aligned_cols=200 Identities=26% Similarity=0.498 Sum_probs=167.1
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------E
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------K 697 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~ 697 (1513)
.++++|++++|+. +++|+|+||+|++||+++|+||||||||||+++|.|+++|.+|+|.++|. +
T Consensus 3 ~L~~~nls~~y~~---~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFGD---TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEECC---EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 4889999999963 57999999999999999999999999999999999999999999999882 6
Q ss_pred EEEcCCCcc-cCccHHHHHccCCC-----CC---c---hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHH
Q 000432 698 AYVPQSPWI-LTGNIRENILFGNQ-----YD---S---CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRI 765 (1513)
Q Consensus 698 ayv~Q~~~l-~~~ti~eNI~fg~~-----~~---~---~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi 765 (1513)
+||+|++.+ ++.|++||+.++.. +. . ++.++.++..++.+. ......+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~-----------~~~~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQF-----------ADRPVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHH
Confidence 999999987 57899999998752 11 1 122333333333221 1234568999999999
Q ss_pred HHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHHHH
Q 000432 766 QIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEELL 843 (1513)
Q Consensus 766 ~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~l~ 843 (1513)
+|||||+++|+++||||||++||+.+...+. +.++.+. +++|+|++||+++.+. .||+|++|++|++++.|++++++
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~-~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~ 227 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTL-ELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVL 227 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHH-HHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999999999999977776 4565553 5789999999999985 59999999999999999999987
Q ss_pred hc
Q 000432 844 KQ 845 (1513)
Q Consensus 844 ~~ 845 (1513)
..
T Consensus 228 ~~ 229 (402)
T PRK09536 228 TA 229 (402)
T ss_pred Cc
Confidence 64
No 479
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.3e-34 Score=335.09 Aligned_cols=201 Identities=25% Similarity=0.328 Sum_probs=165.1
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------- 696 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------- 696 (1513)
..++++|++++|+. +++|+|+||+|++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (269)
T PRK11831 6 NLVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTV 82 (269)
T ss_pred ceEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHH
Confidence 35899999999953 47999999999999999999999999999999999999999999998872
Q ss_pred ---EEEEcCCCcccCc-cHHHHHccCCC----CCchH----HHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHH
Q 000432 697 ---KAYVPQSPWILTG-NIRENILFGNQ----YDSCK----YDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQR 764 (1513)
Q Consensus 697 ---~ayv~Q~~~l~~~-ti~eNI~fg~~----~~~~~----~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqR 764 (1513)
++|++|++.++.. |++||+.++.. .+.+. ..+.++..++. ........+||||||||
T Consensus 83 ~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~-----------~~~~~~~~~LSgGq~qr 151 (269)
T PRK11831 83 RKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLR-----------GAAKLMPSELSGGMARR 151 (269)
T ss_pred hhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCCh-----------hhhhCChhhCCHHHHHH
Confidence 6899999999876 99999987521 12211 11122222221 12233456899999999
Q ss_pred HHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000432 765 IQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEE 841 (1513)
Q Consensus 765 i~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~ 841 (1513)
++||||++++|+++||||||++||+.+.+.+. +.+..+. .++|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 v~laral~~~p~lllLDEPt~~LD~~~~~~l~-~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~ 230 (269)
T PRK11831 152 AALARAIALEPDLIMFDEPFVGQDPITMGVLV-KLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQA 230 (269)
T ss_pred HHHHHHHhcCCCEEEEcCCCccCCHHHHHHHH-HHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999977775 4565553 27899999999998765 99999999999999999999
Q ss_pred HHhc
Q 000432 842 LLKQ 845 (1513)
Q Consensus 842 l~~~ 845 (1513)
+.+.
T Consensus 231 ~~~~ 234 (269)
T PRK11831 231 LQAN 234 (269)
T ss_pred HhcC
Confidence 8764
No 480
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-34 Score=326.84 Aligned_cols=203 Identities=22% Similarity=0.365 Sum_probs=165.1
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------- 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------- 696 (1513)
-++++|+++.|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 4889999999963 57999999999999999999999999999999999999999999999873
Q ss_pred EEEEcCCCcccCc-cHHHHHccCCCC-CchHHHH-HHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhc
Q 000432 697 KAYVPQSPWILTG-NIRENILFGNQY-DSCKYDR-TVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQ 773 (1513)
Q Consensus 697 ~ayv~Q~~~l~~~-ti~eNI~fg~~~-~~~~~~~-v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~ 773 (1513)
++|++|++.++.+ |++||+.++... +.+..++ +.+......++. + ........||||||||++||||++.
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~------~-~~~~~~~~LS~G~~qrl~la~al~~ 154 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLH------E-RRIQRAGTMSGGEQQMLAIGRALMS 154 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHH------H-HHhCchhhCCHHHHHHHHHHHHHHh
Confidence 6899999998875 999999886532 2222222 111111111111 1 1233567899999999999999999
Q ss_pred CCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHHHHh
Q 000432 774 DADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEELLK 844 (1513)
Q Consensus 774 ~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~l~~ 844 (1513)
+|+|+||||||++||+.+.+.+.+ .+..+. +++|+|++||+++.+. .||++++|++|++++.|+++++.+
T Consensus 155 ~p~illlDEPt~~LD~~~~~~l~~-~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 155 QPRLLLLDEPSLGLAPIIIQQIFD-TIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCCEEEEcCccccCCHHHHHHHHH-HHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 999999999999999999877765 555543 5899999999998765 599999999999999999998864
No 481
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.7e-35 Score=324.17 Aligned_cols=191 Identities=27% Similarity=0.440 Sum_probs=156.9
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC---------eEEEEcC
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG---------TKAYVPQ 702 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g---------~~ayv~Q 702 (1513)
++++|+++.|+. +++++|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++| .++|++|
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~i~~~~q 77 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDIAARNRIGYLPE 77 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhHHHHccEEEecc
Confidence 468899999952 4799999999999999999999999999999999999999999999988 3799999
Q ss_pred CCcccCc-cHHHHHccCCCC---Cch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcC
Q 000432 703 SPWILTG-NIRENILFGNQY---DSC----KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQD 774 (1513)
Q Consensus 703 ~~~l~~~-ti~eNI~fg~~~---~~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~ 774 (1513)
++.++.+ |++||+.++... +.. +..+.++..++ .........+||||||||++||||++.+
T Consensus 78 ~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 78 ERGLYPKMKVIDQLVYLAQLKGLKKEEARRRIDEWLERLEL-----------SEYANKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred CCcCCcCCcHHHHHHHHHHHcCCChHHHHHHHHHHHHHcCC-----------hHHHhCcHhhCCHHHHHHHHHHHHHhcC
Confidence 9988864 999999875321 111 11222222222 2233455678999999999999999999
Q ss_pred CCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEec
Q 000432 775 ADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAG 837 (1513)
Q Consensus 775 ~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g 837 (1513)
|+++||||||++||+.+.+.+.+ .+.... +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~-~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKD-VIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHH-HHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999887765 455443 57899999999998765 9999999999998754
No 482
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=8.1e-35 Score=325.83 Aligned_cols=188 Identities=27% Similarity=0.438 Sum_probs=154.2
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe---------------
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT--------------- 696 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~--------------- 696 (1513)
++++|++++|+.. +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4688999999632 47999999999999999999999999999999999999999999998873
Q ss_pred -EEEEcCCCcccC-ccHHHHHccCCC---CCch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHH
Q 000432 697 -KAYVPQSPWILT-GNIRENILFGNQ---YDSC----KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQI 767 (1513)
Q Consensus 697 -~ayv~Q~~~l~~-~ti~eNI~fg~~---~~~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~l 767 (1513)
++|++|++.++. .|++||+.++.. .+.+ +.++.++.+++.+. ......+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHK-----------HRALPAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------hhCChhhcCHHHHHHHHH
Confidence 699999998887 599999987632 1111 22233333333322 223445899999999999
Q ss_pred HHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCeE
Q 000432 768 ARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPA-ADIILVMENGRI 833 (1513)
Q Consensus 768 ARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~-~d~i~vl~~G~i 833 (1513)
|||++.+|+++||||||++||+++.+.+.+ .+..+. +++|+|+|||+++.+.. ||+|++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~-~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMN-LLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999777764 565543 57999999999999875 999999999974
No 483
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.6e-34 Score=326.54 Aligned_cols=194 Identities=29% Similarity=0.413 Sum_probs=158.9
Q ss_pred eEEEEeEEEEeCCCCC-CCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC--------------
Q 000432 631 EVEVVNGKFSWNPESS-SPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG-------------- 695 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~-~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g-------------- 695 (1513)
.++++|++++|+.... .++|+|+||+|++|++++|+|+||||||||+++|+|.++|++|+|.++|
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 5899999999964322 3699999999999999999999999999999999999999999999876
Q ss_pred ---eEEEEcCCCcccCc-cHHHHHccCCC---CCc----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHH
Q 000432 696 ---TKAYVPQSPWILTG-NIRENILFGNQ---YDS----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQR 764 (1513)
Q Consensus 696 ---~~ayv~Q~~~l~~~-ti~eNI~fg~~---~~~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqR 764 (1513)
.++|++|++.++.. |++||+.++.. .++ ++.++.++.+++.+.. .....+||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRL-----------DHLPAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHh-----------hCChhhCCHHHHHH
Confidence 37899999988875 99999987421 111 2233344444443322 23345899999999
Q ss_pred HHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccccCCEEEEEeCCeEEEe
Q 000432 765 IQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPAADIILVMENGRIAQA 836 (1513)
Q Consensus 765 i~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~ 836 (1513)
++||||++++|+++||||||++||+.+.+.+.+ .+..+. .++|+|++||+++.+..||++++|++|++++.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~-~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIAD-LLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 999999999999999999999999999777754 565543 37899999999998888999999999999753
No 484
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-34 Score=322.59 Aligned_cols=189 Identities=30% Similarity=0.445 Sum_probs=155.6
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-----------EEEE
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-----------KAYV 700 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-----------~ayv 700 (1513)
|+++|++++|+. +. .|+||++++|++++|+||||||||||+++|+|+++|++|+|.++|. ++|+
T Consensus 1 i~~~~l~~~~~~---~~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~~~~~i~~~ 75 (211)
T cd03298 1 VRLDKIRFSYGE---QP--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPPADRPVSML 75 (211)
T ss_pred CEEEeEEEEeCC---Ee--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCHhHccEEEE
Confidence 468999999963 22 3999999999999999999999999999999999999999999883 6999
Q ss_pred cCCCcccCc-cHHHHHccCCCC----C---chHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHh
Q 000432 701 PQSPWILTG-NIRENILFGNQY----D---SCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVY 772 (1513)
Q Consensus 701 ~Q~~~l~~~-ti~eNI~fg~~~----~---~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~ 772 (1513)
+|++.++.+ |++||+.++... . +++.+++++.+++.+..+ ....+||||||||++||||++
T Consensus 76 ~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~ia~al~ 144 (211)
T cd03298 76 FQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEK-----------RLPGELSGGERQRVALARVLV 144 (211)
T ss_pred ecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHh-----------CCcccCCHHHHHHHHHHHHHh
Confidence 999999875 999999876421 1 122334444444433222 334589999999999999999
Q ss_pred cCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEec
Q 000432 773 QDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAG 837 (1513)
Q Consensus 773 ~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g 837 (1513)
++|+++||||||++||+++.+.+. +.+..+. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 ~~p~llllDEP~~~LD~~~~~~l~-~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 145 RDKPVLLLDEPFAALDPALRAEML-DLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHH-HHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999987775 4565553 37899999999999865 9999999999998754
No 485
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=334.04 Aligned_cols=201 Identities=28% Similarity=0.477 Sum_probs=166.7
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------E
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------K 697 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~ 697 (1513)
-++++|++++|+.+ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. +
T Consensus 3 ~l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 3 LIETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred eEEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 37899999999632 46999999999999999999999999999999999999999999999873 6
Q ss_pred EEEcCCC--cccCccHHHHHccCCC---CCchH----HHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHH
Q 000432 698 AYVPQSP--WILTGNIRENILFGNQ---YDSCK----YDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIA 768 (1513)
Q Consensus 698 ayv~Q~~--~l~~~ti~eNI~fg~~---~~~~~----~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lA 768 (1513)
+||+|+| .+++.|++||+.++.. .+++. .++.++.+++.+.. ......||||||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Gq~qrl~la 149 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELR-----------DRVPHHLSGGEKKRVAIA 149 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHh-----------cCCcccCCHHHHHHHHHH
Confidence 9999998 3678899999987542 33322 23334444443322 234468999999999999
Q ss_pred HHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHHHHhc
Q 000432 769 RAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 769 Ral~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
||++.+|+++||||||++||+.+.+.+. +.++.+. .++|+|++||+++.+. .||+|++|++|++++.|+++++.+.
T Consensus 150 raL~~~p~llilDEPt~gLD~~~~~~l~-~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 150 GVIAMEPQVLVLDEPTAGLDPQGVKELI-DFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHH-HHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 9999999999999999999999977775 4565543 2799999999999985 5999999999999999999998754
No 486
>PRK10535 macrolide transporter ATP-binding /permease protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=371.09 Aligned_cols=213 Identities=25% Similarity=0.363 Sum_probs=186.1
Q ss_pred eEEEEEEEEEEcCC--CCcceeeeeEEeeCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcEEEEcCeeCCCCChHHh---
Q 000432 1261 TISFHNLQIRYAEH--LPSVLKNISCTFPGRKKVGVVGRTGSGKSTLIQAIFRIVEPTMGSIIIDNVDITKIGLHDL--- 1335 (1513)
Q Consensus 1261 ~I~f~nvsf~Y~~~--~~~vLk~is~~I~~GekvgIVGrTGSGKSTLl~lL~rl~ep~~G~I~IDGvdI~~i~l~~L--- 1335 (1513)
.|+++|++++|+.+ .+++|+|+||+|++||+++|+|++|||||||+++|.|+++|++|+|.+||.++.+.+.+++
T Consensus 4 ~l~~~nl~~~y~~~~~~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 83 (648)
T PRK10535 4 LLELKDIRRSYPSGEEQVEVLKGISLDIYAGEMVAIVGASGSGKSTLMNILGCLDKPTSGTYRVAGQDVATLDADALAQL 83 (648)
T ss_pred EEEEeeEEEEeCCCCCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEcCcCCHHHHHHH
Confidence 48999999999643 2469999999999999999999999999999999999999999999999999999887764
Q ss_pred -hhceEEEcCCCccccC-cHhhccCCC---CCC----CHHHHHHHHHHcCCcHHHHhhhccccchhccCCCCCChhHHHH
Q 000432 1336 -RSRLGIIPQDPTLFDG-TVRGNLDPL---VQY----SDKQVWEALDKCQLGDLVRAKEEKLDSTVAENGENWSVGQRQL 1406 (1513)
Q Consensus 1336 -R~~isiVpQdp~LF~g-TIR~NLdp~---~~~----sdeei~~aL~~~~l~~~I~~lp~gLdt~V~e~G~nLSgGQRQr 1406 (1513)
|++++++||+|.+|++ |+.||++.. ... .++++.+.++..++.+..... ..+||+|||||
T Consensus 84 ~~~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~lgl~~~~~~~-----------~~~LS~Gq~qr 152 (648)
T PRK10535 84 RREHFGFIFQRYHLLSHLTAAQNVEVPAVYAGLERKQRLLRAQELLQRLGLEDRVEYQ-----------PSQLSGGQQQR 152 (648)
T ss_pred HhccEEEEeCCcccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhcCC-----------cccCCHHHHHH
Confidence 6789999999999975 999999631 111 123456677777766544333 35799999999
Q ss_pred HHHHHHHccCCCEEEEecCCCCCCHHHHHHHHHHHHHhc-CCcEEEEeccChhhHhhcCEEEEEeCCEEeEecChhHHH
Q 000432 1407 FCLGRTLLKKSSILVLDEATASVDSATDGVIQKIISQEF-KDRTVVTIAHRIHTVIDSDLVLVLSDGRIAEYDSPTKLL 1484 (1513)
Q Consensus 1407 l~LARALLr~~~ILiLDEaTSslD~~Te~~Iq~~i~~~~-~~~TvI~IAHRl~ti~~~DrIlVLd~G~IvE~Gtp~eLl 1484 (1513)
++|||||+++|++|+|||||++||.++.+.+.+.|++.. +++|+|+|+|+++.+..||++++|++|++++.|+++|..
T Consensus 153 v~LAraL~~~P~lLllDEP~~gLD~~s~~~l~~ll~~l~~~g~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (648)
T PRK10535 153 VSIARALMNGGQVILADEPTGALDSHSGEEVMAILHQLRDRGHTVIIVTHDPQVAAQAERVIEIRDGEIVRNPPAQEKV 231 (648)
T ss_pred HHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhcCCEEEEECCCHHHHHhCCEEEEEECCEEEeecCccccc
Confidence 999999999999999999999999999999999998764 479999999999999889999999999999999999886
No 487
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-34 Score=331.38 Aligned_cols=198 Identities=26% Similarity=0.448 Sum_probs=164.3
Q ss_pred EEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------EE
Q 000432 632 VEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------KA 698 (1513)
Q Consensus 632 I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~a 698 (1513)
++++|++++|++ +++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|. ++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999963 47999999999999999999999999999999999999999999999873 69
Q ss_pred EEcCCCcccCc-cHHHHHccCCC-----CC--ch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHH
Q 000432 699 YVPQSPWILTG-NIRENILFGNQ-----YD--SC----KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQ 766 (1513)
Q Consensus 699 yv~Q~~~l~~~-ti~eNI~fg~~-----~~--~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~ 766 (1513)
|++|++.++.+ |+.||+.++.. +. .+ +.++.++.+++.+ ........||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINH-----------LADRRLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHH-----------HHcCCcccCCHHHHHHHH
Confidence 99999988866 99999998631 11 11 1222233333322 223456789999999999
Q ss_pred HHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHHHHh
Q 000432 767 IARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEELLK 844 (1513)
Q Consensus 767 lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~l~~ 844 (1513)
||||+.++|+++||||||++||+++.+.+.+ .+..+. +++|+|++||+++.+. .||+|++|++|++++.|+++++..
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~-~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMR-LMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 9999999999999999999999999777754 555543 4799999999999876 499999999999999999988764
No 488
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.5e-34 Score=326.95 Aligned_cols=202 Identities=28% Similarity=0.418 Sum_probs=156.5
Q ss_pred EEEEeEEEEeCCCC-CCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC---------------
Q 000432 632 VEVVNGKFSWNPES-SSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG--------------- 695 (1513)
Q Consensus 632 I~~~~~sf~~~~~~-~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g--------------- 695 (1513)
++++|++++|+... ..++|+|+||++++|++++|+|+||||||||+++|+|+++|++|+|.++|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 67899999996321 13799999999999999999999999999999999999999999999877
Q ss_pred -eEEEEcCCCc--cc-CccHHHHHccCCCC-CchHHHHHHHHHhcHHHHhhccCCC-CccccCCCCCCChHHHHHHHHHH
Q 000432 696 -TKAYVPQSPW--IL-TGNIRENILFGNQY-DSCKYDRTVEACALVKDFELFASGD-LTEIGERGINMSGGQKQRIQIAR 769 (1513)
Q Consensus 696 -~~ayv~Q~~~--l~-~~ti~eNI~fg~~~-~~~~~~~v~~~~~l~~d~~~l~~Gd-~T~Ige~g~~LSGGQkqRi~lAR 769 (1513)
.++|++|++. ++ ..|++||+.++... .....++..+.. ..+.++.+ |. .........+||||||||++|||
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~-~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~lar 158 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEA-VLLLLVGV--GLPEEVLNRYPHELSGGQRQRVAIAR 158 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHH-HHHHHHHC--CCChhHhhCCchhcCHHHHHHHHHHH
Confidence 2689999993 34 57999999864211 000000111110 01112222 22 12345667889999999999999
Q ss_pred HHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcC--CcEEEEEccCCCccc-cCCEEEEEeCCeEEEec
Q 000432 770 AVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILK--DKSVLYVTHQVEFLP-AADIILVMENGRIAQAG 837 (1513)
Q Consensus 770 al~~~~~illLDep~salD~~~~~~i~~~~~~~~~~--~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g 837 (1513)
|++++|+++||||||++||+++.+.+. +.+..+.+ ++|+|++||+++.+. .||+|++|++|++++.|
T Consensus 159 al~~~p~lllLDEPt~~LD~~~~~~l~-~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 159 ALALNPKLLIADEPTSALDVSVQAQIL-DLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHhcCCCEEEecCCCCCCCHHHHHHHH-HHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999977775 45655543 799999999999887 59999999999998754
No 489
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-34 Score=332.80 Aligned_cols=204 Identities=25% Similarity=0.426 Sum_probs=165.9
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCcc-----CCCcEEEECC----------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQ-----KMAGTVKISG---------- 695 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~-----~~~G~i~~~g---------- 695 (1513)
.-+++|+++.|++ +++|+|+||+|++|++++|+|+||||||||+++|+|+.+ |++|+|.++|
T Consensus 5 ~~~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 81 (251)
T PRK14244 5 HASVKNLNLWYGS---KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNV 81 (251)
T ss_pred EEEeeeEEEEECC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccch
Confidence 3468899999962 579999999999999999999999999999999999986 4799999877
Q ss_pred -----eEEEEcCCCcccCccHHHHHccCCCC-----CchHHH----HHHHHHhcHHHHhhccCCCCccccCCCCCCChHH
Q 000432 696 -----TKAYVPQSPWILTGNIRENILFGNQY-----DSCKYD----RTVEACALVKDFELFASGDLTEIGERGINMSGGQ 761 (1513)
Q Consensus 696 -----~~ayv~Q~~~l~~~ti~eNI~fg~~~-----~~~~~~----~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQ 761 (1513)
.++|++|++.++.+|++||+.++... +.+.++ ++++..++.+++ .+.++..+.+|||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq 154 (251)
T PRK14244 82 VLLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEEL-------GDRLKDSAFELSGGQ 154 (251)
T ss_pred HHHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhcChhhCCHHH
Confidence 26899999999999999999876321 111121 222222221111 123455678999999
Q ss_pred HHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChH
Q 000432 762 KQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFE 840 (1513)
Q Consensus 762 kqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~ 840 (1513)
|||++||||++++|+++||||||++||+.+.+.+. +.+..+.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 155 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~-~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (251)
T PRK14244 155 QQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIE-NLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQ 233 (251)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHH-HHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHH
Confidence 99999999999999999999999999999877665 567666668999999999999865 9999999999999999998
Q ss_pred HHHhc
Q 000432 841 ELLKQ 845 (1513)
Q Consensus 841 ~l~~~ 845 (1513)
++.+.
T Consensus 234 ~~~~~ 238 (251)
T PRK14244 234 EIFKN 238 (251)
T ss_pred HHhcC
Confidence 88654
No 490
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=334.47 Aligned_cols=205 Identities=22% Similarity=0.353 Sum_probs=169.3
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccC-----CCcEEEECC---------
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQK-----MAGTVKISG--------- 695 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~-----~~G~i~~~g--------- 695 (1513)
..++++|++++|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.++|
T Consensus 20 ~~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~ 96 (276)
T PRK14271 20 PAMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDV 96 (276)
T ss_pred cEEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchh
Confidence 35899999999963 5799999999999999999999999999999999999985 699999877
Q ss_pred -----eEEEEcCCCcccCccHHHHHccCCCC----CchHHHH----HHHHHhcHHHHhhccCCCCccccCCCCCCChHHH
Q 000432 696 -----TKAYVPQSPWILTGNIRENILFGNQY----DSCKYDR----TVEACALVKDFELFASGDLTEIGERGINMSGGQK 762 (1513)
Q Consensus 696 -----~~ayv~Q~~~l~~~ti~eNI~fg~~~----~~~~~~~----v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQk 762 (1513)
.++|++|++.+++.|++|||.++... +.+.+++ .++.+++ .+...+.....+.+||||||
T Consensus 97 ~~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~l~~~~~~LSgGq~ 169 (276)
T PRK14271 97 LEFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGL-------WDAVKDRLSDSPFRLSGGQQ 169 (276)
T ss_pred HHHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCC-------CchhhhHhhCCcccCCHHHH
Confidence 25899999999999999999986321 2222221 1222222 11122345567789999999
Q ss_pred HHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000432 763 QRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEE 841 (1513)
Q Consensus 763 qRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~ 841 (1513)
||++||||++++|+++||||||++||+.+.+.+++ .+..+.+++|+|+|||+++.+.. ||++++|++|++++.|+.++
T Consensus 170 qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~-~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~ 248 (276)
T PRK14271 170 QLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEE-FIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQ 248 (276)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999877764 56655556899999999998765 99999999999999999999
Q ss_pred HHhc
Q 000432 842 LLKQ 845 (1513)
Q Consensus 842 l~~~ 845 (1513)
+.+.
T Consensus 249 ~~~~ 252 (276)
T PRK14271 249 LFSS 252 (276)
T ss_pred HHhC
Confidence 8754
No 491
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-34 Score=332.95 Aligned_cols=206 Identities=23% Similarity=0.378 Sum_probs=166.1
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------E
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------K 697 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------~ 697 (1513)
.++++|++++|+.. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|.+|+|.++|. +
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 58999999999642 246999999999999999999999999999999999999999999999883 5
Q ss_pred EEEcCCCc--ccCccHHHHHccCCCC---CchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHh
Q 000432 698 AYVPQSPW--ILTGNIRENILFGNQY---DSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVY 772 (1513)
Q Consensus 698 ayv~Q~~~--l~~~ti~eNI~fg~~~---~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~ 772 (1513)
+|++|+|+ +...|+++|+.|+... ..+...+.+ ..+.+.+.. ......+..+||||||||++||||++
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~l-----~~~~~~~~~~LS~G~~qrl~laral~ 158 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRV--SEALKQVDM-----LERADYEPNALSGGQKQRVAIAGVLA 158 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHH--HHHHHHcCC-----chhhhCCcccCCHHHHHHHHHHHHHH
Confidence 89999995 4567899999987431 222221111 111111111 11123456789999999999999999
Q ss_pred cCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccccCCEEEEEeCCeEEEecChHHHHhc
Q 000432 773 QDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPAADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 773 ~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
.+|+++||||||++||+.+.+.+++ .++.+. .++|+|+|||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 159 ~~p~lllLDEPt~~LD~~~~~~l~~-~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 159 LNPSVIILDEATSMLDPDARQNLLD-LVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHH-HHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 9999999999999999999887764 565553 37899999999998878999999999999999999988654
No 492
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=328.84 Aligned_cols=203 Identities=24% Similarity=0.323 Sum_probs=163.9
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe--------------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT-------------- 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~-------------- 696 (1513)
.++++|++++|+. +++|+|+||++++||+++|+|+||||||||+++|+|+++|++|+|.++|.
T Consensus 2 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T PRK11124 2 SIQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIR 78 (242)
T ss_pred EEEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHH
Confidence 3789999999963 47999999999999999999999999999999999999999999998763
Q ss_pred -----EEEEcCCCcccCc-cHHHHHccCC-C---CCchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHH
Q 000432 697 -----KAYVPQSPWILTG-NIRENILFGN-Q---YDSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQ 766 (1513)
Q Consensus 697 -----~ayv~Q~~~l~~~-ti~eNI~fg~-~---~~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~ 766 (1513)
++|++|++.++.+ |++|||.++. . ...+...+. ..+-++.+ |....+.....+||||||||++
T Consensus 79 ~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~ 151 (242)
T PRK11124 79 ELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALAR-----AEKLLERL--RLKPYADRFPLHLSGGQQQRVA 151 (242)
T ss_pred HHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CChhhhhCChhhCCHHHHHHHH
Confidence 5899999998865 9999997431 1 111111110 01111221 2233344556789999999999
Q ss_pred HHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHh
Q 000432 767 IARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLK 844 (1513)
Q Consensus 767 lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~ 844 (1513)
||||++.+|+++||||||++||+.+.+.+.+ .++.+. +++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 152 laral~~~p~llilDEPt~~LD~~~~~~l~~-~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 152 IARALMMEPQVLLFDEPTAALDPEITAQIVS-IIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHHHhcCCCEEEEcCCCCcCCHHHHHHHHH-HHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 9999999999999999999999999877764 566554 48999999999999865 99999999999999999888653
No 493
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=1.4e-34 Score=326.21 Aligned_cols=197 Identities=25% Similarity=0.381 Sum_probs=162.0
Q ss_pred ceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe-------------
Q 000432 630 FEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------- 696 (1513)
Q Consensus 630 ~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------- 696 (1513)
..|+++|+++.|+. +++++|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.
T Consensus 6 ~~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 82 (225)
T PRK10247 6 PLLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQ 82 (225)
T ss_pred ceEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhc
Confidence 35899999999962 47999999999999999999999999999999999999999999999873
Q ss_pred EEEEcCCCcccCccHHHHHccCCCCC-----chHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHH
Q 000432 697 KAYVPQSPWILTGNIRENILFGNQYD-----SCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAV 771 (1513)
Q Consensus 697 ~ayv~Q~~~l~~~ti~eNI~fg~~~~-----~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal 771 (1513)
++|++|++++++.|++||+.++..+. +++.++.++..++. .+.......+||||||||++||||+
T Consensus 83 i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~----------~~~~~~~~~~LS~G~~qrv~laral 152 (225)
T PRK10247 83 VSYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERFALP----------DTILTKNIAELSGGEKQRISLIRNL 152 (225)
T ss_pred cEEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCC----------hHHhcCCcccCCHHHHHHHHHHHHH
Confidence 69999999999999999998753211 11112222222221 1234566789999999999999999
Q ss_pred hcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccccCCEEEEEe-CCeEEEecChH
Q 000432 772 YQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLPAADIILVME-NGRIAQAGRFE 840 (1513)
Q Consensus 772 ~~~~~illLDep~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~~~d~i~vl~-~G~i~~~g~~~ 840 (1513)
+++|+++||||||++||+.+.+.+. +++..+. .++|+|++||+++.++.||+|++|+ ++..+++|+|+
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~-~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 153 QFMPKVLLLDEITSALDESNKHNVN-EIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHH-HHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 9999999999999999999977665 4566553 3789999999999998899999994 67777888874
No 494
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=330.55 Aligned_cols=204 Identities=26% Similarity=0.396 Sum_probs=165.4
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccC-----CCcEEEECCe---------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQK-----MAGTVKISGT--------- 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~-----~~G~i~~~g~--------- 696 (1513)
.++++|++++|++ .++|+|+||+|++|++++|+|+||||||||+++|.|+++| ++|+|.++|.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4889999999963 4799999999999999999999999999999999999974 6999999873
Q ss_pred ----EEEEcCCCccc-CccHHHHHccCCCC-----CchHH----HHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHH
Q 000432 697 ----KAYVPQSPWIL-TGNIRENILFGNQY-----DSCKY----DRTVEACALVKDFELFASGDLTEIGERGINMSGGQK 762 (1513)
Q Consensus 697 ----~ayv~Q~~~l~-~~ti~eNI~fg~~~-----~~~~~----~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQk 762 (1513)
++|++|++.++ +.|++||+.++... +.+.+ .+.++.+++.+.+ .........+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEV-------KDRLDAPAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCCcccCCHHHH
Confidence 68999999755 67999999876421 11111 2222333322111 1123445678999999
Q ss_pred HHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHH
Q 000432 763 QRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEE 841 (1513)
Q Consensus 763 qRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~ 841 (1513)
||++||||+.++|+++||||||++||+.+.+.+.+ .+..+.+++|+|++||+++.+. .||+|++|++|++++.|+.++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~-~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 231 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIES-LFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTRE 231 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHH-HHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHH
Confidence 99999999999999999999999999999877764 5665556899999999999875 599999999999999999998
Q ss_pred HHhc
Q 000432 842 LLKQ 845 (1513)
Q Consensus 842 l~~~ 845 (1513)
+.+.
T Consensus 232 ~~~~ 235 (250)
T PRK14247 232 VFTN 235 (250)
T ss_pred HHcC
Confidence 8653
No 495
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=330.97 Aligned_cols=204 Identities=24% Similarity=0.408 Sum_probs=165.8
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccC-----CCcEEEECCe---------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQK-----MAGTVKISGT--------- 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~-----~~G~i~~~g~--------- 696 (1513)
.++++|++++|+. +++|+|+||++++||+++|+|+||||||||+++|+|+++| ++|+|.++|.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 5889999999963 4799999999999999999999999999999999999987 4999998762
Q ss_pred ------EEEEcCCCcccCc-cHHHHHccCCCC-----CchHH----HHHHHHHhcHHHHhhccCCCCccccCCCCCCChH
Q 000432 697 ------KAYVPQSPWILTG-NIRENILFGNQY-----DSCKY----DRTVEACALVKDFELFASGDLTEIGERGINMSGG 760 (1513)
Q Consensus 697 ------~ayv~Q~~~l~~~-ti~eNI~fg~~~-----~~~~~----~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGG 760 (1513)
++|++|++.++.. |++||+.++... +.+.. +++++..++.+++ .........+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEV-------KDRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccch-------hhhhccChhhCCHH
Confidence 5899999999875 999999875321 11111 1122222221111 12235567799999
Q ss_pred HHHHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecCh
Q 000432 761 QKQRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRF 839 (1513)
Q Consensus 761 QkqRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~ 839 (1513)
||||++||||++++|+++||||||++||+.+.+.+. +.+..+.+++|+|++||+++.+.. ||+|++|++|++++.|++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~-~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~ 232 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIE-ELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPT 232 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHH-HHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 999999999999999999999999999999987776 456665567999999999998764 999999999999999999
Q ss_pred HHHHhc
Q 000432 840 EELLKQ 845 (1513)
Q Consensus 840 ~~l~~~ 845 (1513)
+++.+.
T Consensus 233 ~~~~~~ 238 (253)
T PRK14267 233 RKVFEN 238 (253)
T ss_pred HHHHhC
Confidence 988654
No 496
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-34 Score=330.71 Aligned_cols=203 Identities=23% Similarity=0.386 Sum_probs=167.1
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccC-----CCcEEEECCe---------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQK-----MAGTVKISGT--------- 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~-----~~G~i~~~g~--------- 696 (1513)
.++++|+++.|+. +++|+|+||+|++|++++|+|+||||||||+++|+|..+| ++|+|.++|.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4789999999963 5799999999999999999999999999999999999986 5999998772
Q ss_pred -----EEEEcCCCcccCccHHHHHccCCCC---C-chHH----HHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHH
Q 000432 697 -----KAYVPQSPWILTGNIRENILFGNQY---D-SCKY----DRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQ 763 (1513)
Q Consensus 697 -----~ayv~Q~~~l~~~ti~eNI~fg~~~---~-~~~~----~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkq 763 (1513)
++|++|++.++..|++||+.++... . ++.. .+.++..++.+++ .+.......+|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEV-------KDRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhh-------hHHhhcCcccCCHHHHH
Confidence 5899999999999999999986421 1 1111 1222222332222 13345667789999999
Q ss_pred HHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHH
Q 000432 764 RIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEEL 842 (1513)
Q Consensus 764 Ri~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l 842 (1513)
||+||||++.+|+++||||||++||+++.+.+. +.+..+.+++|+|++||+++.+.. ||++++|++|++++.|+.+++
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~-~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 231 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIE-ELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVI 231 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHH-HHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 999999999999999999999999999977665 467666667999999999999776 999999999999999998887
Q ss_pred Hh
Q 000432 843 LK 844 (1513)
Q Consensus 843 ~~ 844 (1513)
.+
T Consensus 232 ~~ 233 (249)
T PRK14253 232 FS 233 (249)
T ss_pred Hc
Confidence 54
No 497
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.9e-34 Score=341.88 Aligned_cols=206 Identities=27% Similarity=0.451 Sum_probs=166.5
Q ss_pred cceEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECCe------------
Q 000432 629 EFEVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISGT------------ 696 (1513)
Q Consensus 629 ~~~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g~------------ 696 (1513)
...|+++|++++|+. ..+|+|+||+|++|++++++||||||||||+++|+|+++|++|+|.++|.
T Consensus 39 ~~~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~~~~~~~ 115 (340)
T PRK13536 39 TVAIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARARLARAR 115 (340)
T ss_pred ceeEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcchHHHhcc
Confidence 346999999999963 46999999999999999999999999999999999999999999999883
Q ss_pred EEEEcCCCccc-CccHHHHHcc-CCCC--CchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHh
Q 000432 697 KAYVPQSPWIL-TGNIRENILF-GNQY--DSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVY 772 (1513)
Q Consensus 697 ~ayv~Q~~~l~-~~ti~eNI~f-g~~~--~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~ 772 (1513)
++||||++.++ ..|++||+.| +.-+ +....++.++ .+.+.+ .+++..++ +..+||||||||++||||+.
T Consensus 116 ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~--~ll~~~-~L~~~~~~----~~~~LS~G~kqrv~lA~aL~ 188 (340)
T PRK13536 116 IGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIP--SLLEFA-RLESKADA----RVSDLSGGMKRRLTLARALI 188 (340)
T ss_pred EEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHH--HHHHHc-CCchhhCC----ChhhCCHHHHHHHHHHHHHh
Confidence 69999999886 5699999985 3211 2111111111 111111 22332333 34579999999999999999
Q ss_pred cCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHHHHhc
Q 000432 773 QDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 773 ~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
++|+++||||||++||+.+.+.+.+ .+..+. +|+|+|++||+++.+.. ||+|++|++|+++..|+.+++.+.
T Consensus 189 ~~P~lLiLDEPt~gLD~~~r~~l~~-~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 189 NDPQLLILDEPTTGLDPHARHLIWE-RLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHH-HHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 9999999999999999999887764 565543 58999999999999865 999999999999999999998653
No 498
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-34 Score=328.70 Aligned_cols=203 Identities=22% Similarity=0.349 Sum_probs=165.4
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC--------------e
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG--------------T 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g--------------~ 696 (1513)
.++++|++++|+. +++|+|+||++++|++++|+|+||||||||+++|.|+++|++|+|.++| .
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 3789999999963 4799999999999999999999999999999999999999999999987 2
Q ss_pred EEEEcCCCcccC-ccHHHHHccCCCC----CchHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHH
Q 000432 697 KAYVPQSPWILT-GNIRENILFGNQY----DSCKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAV 771 (1513)
Q Consensus 697 ~ayv~Q~~~l~~-~ti~eNI~fg~~~----~~~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal 771 (1513)
++|++|++.++. .|++||+.++... +++..++.+ .+-++.+ |..........+||||||||++||||+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQREDRA-----NELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHHHHHH-----HHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 699999998887 4999999876322 111111111 1112222 222334556779999999999999999
Q ss_pred hcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhc-CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHHHHh
Q 000432 772 YQDADIYLLDDPFSAVDAHTGTQLFKDCLMGIL-KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEELLK 844 (1513)
Q Consensus 772 ~~~~~illLDep~salD~~~~~~i~~~~~~~~~-~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~l~~ 844 (1513)
+++|+++||||||++||+.+.+.+. +.+..+. +++|+|++||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~-~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIK-RIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHH-HHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 9999999999999999999977765 4555543 4899999999998765 599999999999999999998864
No 499
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-34 Score=329.83 Aligned_cols=204 Identities=24% Similarity=0.410 Sum_probs=169.8
Q ss_pred eEEEEeEEEEeCCCCCCCcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccC-----CCcEEEECCe---------
Q 000432 631 EVEVVNGKFSWNPESSSPTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQK-----MAGTVKISGT--------- 696 (1513)
Q Consensus 631 ~I~~~~~sf~~~~~~~~~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~-----~~G~i~~~g~--------- 696 (1513)
-++++|+++.|+. +++|+|+||+|++||+++|+|+||||||||+++|+|+.+| ++|+|.++|.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 4889999999963 4799999999999999999999999999999999999875 7999998762
Q ss_pred ------EEEEcCCCcccCccHHHHHccCCCC----Cc----hHHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHH
Q 000432 697 ------KAYVPQSPWILTGNIRENILFGNQY----DS----CKYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQK 762 (1513)
Q Consensus 697 ------~ayv~Q~~~l~~~ti~eNI~fg~~~----~~----~~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQk 762 (1513)
++|++|++.++..|++||+.|+... +. ++.+++++.+++.++++ .........||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVK-------DDLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhh-------hHhhCCcccCCHHHH
Confidence 6999999999999999999986421 11 12233444444432222 123456778999999
Q ss_pred HHHHHHHHHhcCCCEEEeeCcCCCCCHHHHHHHHHHHHhhhcCCcEEEEEccCCCcccc-CCEEEEEeCCeEEEecChHH
Q 000432 763 QRIQIARAVYQDADIYLLDDPFSAVDAHTGTQLFKDCLMGILKDKSVLYVTHQVEFLPA-ADIILVMENGRIAQAGRFEE 841 (1513)
Q Consensus 763 qRi~lARal~~~~~illLDep~salD~~~~~~i~~~~~~~~~~~~TvilvtH~~~~l~~-~d~i~vl~~G~i~~~g~~~~ 841 (1513)
||++||||++++|+|+||||||++||+.+...+. +.+..+.+++|+|+|||+++.+.. ||+|++|++|++++.|+.++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~-~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 232 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIE-DLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEK 232 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHH-HHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHH
Confidence 9999999999999999999999999999987775 467666667999999999998765 99999999999999999998
Q ss_pred HHhc
Q 000432 842 LLKQ 845 (1513)
Q Consensus 842 l~~~ 845 (1513)
+...
T Consensus 233 ~~~~ 236 (251)
T PRK14270 233 IFLE 236 (251)
T ss_pred HhcC
Confidence 8654
No 500
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-34 Score=348.05 Aligned_cols=186 Identities=27% Similarity=0.414 Sum_probs=155.3
Q ss_pred CcccceeEEEeCCcEEEEEecCCCcHHHHHHHHhcCccCCCcEEEECC-----------------eEEEEcCCCcccC-c
Q 000432 648 PTLDGIQLKVKRGMKVAICGTVGSGKSSLLSCILGEIQKMAGTVKISG-----------------TKAYVPQSPWILT-G 709 (1513)
Q Consensus 648 ~~L~~i~l~i~~G~~~~ivG~~GsGKStLl~~llg~~~~~~G~i~~~g-----------------~~ayv~Q~~~l~~-~ 709 (1513)
++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++| .++||+|++.++. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 479999999999999999999999999999999999999999999987 3799999999986 5
Q ss_pred cHHHHHccCCC---CCch----HHHHHHHHHhcHHHHhhccCCCCccccCCCCCCChHHHHHHHHHHHHhcCCCEEEeeC
Q 000432 710 NIRENILFGNQ---YDSC----KYDRTVEACALVKDFELFASGDLTEIGERGINMSGGQKQRIQIARAVYQDADIYLLDD 782 (1513)
Q Consensus 710 ti~eNI~fg~~---~~~~----~~~~v~~~~~l~~d~~~l~~Gd~T~Ige~g~~LSGGQkqRi~lARal~~~~~illLDe 782 (1513)
|++|||.|+.. ++.+ +..+.++.++|.+ .......+||||||||++||||++.+|+++||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~-----------~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLEN-----------YAHSYPDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCh-----------hhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999998642 2221 2223333333332 2233456899999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHhhhc--CCcEEEEEccCCCccc-cCCEEEEEeCCeEEEecChHHHHhc
Q 000432 783 PFSAVDAHTGTQLFKDCLMGIL--KDKSVLYVTHQVEFLP-AADIILVMENGRIAQAGRFEELLKQ 845 (1513)
Q Consensus 783 p~salD~~~~~~i~~~~~~~~~--~~~TvilvtH~~~~l~-~~d~i~vl~~G~i~~~g~~~~l~~~ 845 (1513)
|||+||+.+.+.+.+ .+..+. .++|+|+|||+++.+. .||+|++|++|++++.|+++++...
T Consensus 191 Pts~LD~~~r~~l~~-~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 191 AFSALDPLIRTEMQD-ELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred CCccCCHHHHHHHHH-HHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhC
Confidence 999999999877764 555443 4899999999999875 5999999999999999999998765
Done!